Query 015842
Match_columns 399
No_of_seqs 202 out of 563
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 03:28:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqc_A Thiol peroxidase, perox 99.9 9E-27 3.1E-31 206.3 9.2 156 183-387 5-162 (164)
2 4g2e_A Peroxiredoxin; redox pr 99.9 1.1E-25 3.7E-30 197.1 14.0 153 182-383 3-156 (157)
3 3mng_A Peroxiredoxin-5, mitoch 99.9 4E-22 1.4E-26 179.5 15.0 154 180-380 12-173 (173)
4 3sbc_A Peroxiredoxin TSA1; alp 99.9 5.6E-22 1.9E-26 186.4 15.1 165 182-398 22-204 (216)
5 3keb_A Probable thiol peroxida 99.9 1.8E-21 6.1E-26 183.7 16.9 153 179-387 18-178 (224)
6 3tue_A Tryparedoxin peroxidase 99.9 9.5E-22 3.2E-26 185.2 14.7 165 181-396 24-206 (219)
7 3p7x_A Probable thiol peroxida 99.9 4.5E-21 1.5E-25 167.7 15.6 147 180-383 17-166 (166)
8 3drn_A Peroxiredoxin, bacterio 99.9 8.1E-21 2.8E-25 165.0 14.8 155 183-393 2-157 (161)
9 3uma_A Hypothetical peroxiredo 99.9 3.1E-21 1.1E-25 175.3 12.3 152 182-380 25-184 (184)
10 1psq_A Probable thiol peroxida 99.8 1.6E-20 5.4E-25 163.8 16.1 148 180-383 13-163 (163)
11 1tp9_A Peroxiredoxin, PRX D (t 99.8 4.1E-21 1.4E-25 168.2 12.4 151 182-380 3-162 (162)
12 1xiy_A Peroxiredoxin, pfaop; a 99.8 5.9E-21 2E-25 174.3 13.2 161 184-382 2-179 (182)
13 3gkn_A Bacterioferritin comigr 99.8 1.5E-20 5E-25 162.4 13.9 152 182-385 6-162 (163)
14 3ixr_A Bacterioferritin comigr 99.8 5.7E-21 2E-25 170.2 11.1 152 182-385 20-178 (179)
15 2yzh_A Probable thiol peroxida 99.8 2.4E-20 8.3E-25 163.5 13.8 149 181-383 19-170 (171)
16 2xhf_A Peroxiredoxin 5; oxidor 99.8 3.7E-21 1.3E-25 174.4 8.0 153 181-381 12-170 (171)
17 1q98_A Thiol peroxidase, TPX; 99.8 2.8E-20 9.7E-25 162.8 13.2 147 182-381 16-165 (165)
18 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 3.1E-20 1.1E-24 165.2 13.6 152 182-382 2-161 (167)
19 3zrd_A Thiol peroxidase; oxido 99.8 8.8E-20 3E-24 166.4 14.3 149 180-381 49-200 (200)
20 4eo3_A Bacterioferritin comigr 99.8 3.8E-20 1.3E-24 181.9 12.5 137 217-396 13-150 (322)
21 1n8j_A AHPC, alkyl hydroperoxi 99.8 1.3E-19 4.4E-24 162.6 14.3 149 184-386 2-157 (186)
22 2pwj_A Mitochondrial peroxired 99.8 1.4E-19 4.8E-24 161.1 14.3 152 184-380 8-171 (171)
23 3qpm_A Peroxiredoxin; oxidored 99.8 2.3E-19 8E-24 168.8 14.8 154 181-386 46-207 (240)
24 4f82_A Thioredoxin reductase; 99.8 9.5E-20 3.3E-24 166.2 11.7 161 182-381 9-175 (176)
25 1prx_A HORF6; peroxiredoxin, h 99.8 3.5E-19 1.2E-23 165.9 15.4 157 182-387 4-171 (224)
26 2pn8_A Peroxiredoxin-4; thiore 99.8 3.1E-19 1.1E-23 164.1 14.3 156 180-387 16-179 (211)
27 3tjj_A Peroxiredoxin-4; thiore 99.8 2.5E-19 8.7E-24 170.6 14.1 154 181-386 60-221 (254)
28 2v2g_A Peroxiredoxin 6; oxidor 99.8 2.9E-19 9.8E-24 168.4 14.2 156 183-387 3-167 (233)
29 1xvw_A Hypothetical protein RV 99.8 6E-19 2.1E-23 151.5 15.1 148 183-384 9-159 (160)
30 1we0_A Alkyl hydroperoxide red 99.8 3.6E-19 1.2E-23 158.1 13.2 148 184-386 2-158 (187)
31 2c0d_A Thioredoxin peroxidase 99.8 6E-19 2.1E-23 164.1 14.9 152 183-387 25-186 (221)
32 2i81_A 2-Cys peroxiredoxin; st 99.8 1.1E-18 3.6E-23 160.7 15.7 153 181-386 19-181 (213)
33 2jsy_A Probable thiol peroxida 99.8 1.3E-18 4.5E-23 151.0 15.0 149 180-384 15-166 (167)
34 1nm3_A Protein HI0572; hybrid, 99.8 6.1E-19 2.1E-23 163.5 13.1 152 183-382 3-164 (241)
35 2h01_A 2-Cys peroxiredoxin; th 99.8 1E-18 3.5E-23 156.2 13.7 150 184-386 1-160 (192)
36 1xvq_A Thiol peroxidase; thior 99.8 2.1E-18 7E-23 152.6 15.6 150 180-383 15-166 (175)
37 1zye_A Thioredoxin-dependent p 99.8 1.6E-18 5.5E-23 160.0 14.8 156 180-387 24-187 (220)
38 1xcc_A 1-Cys peroxiredoxin; un 99.8 1.9E-18 6.6E-23 160.5 14.6 158 183-387 3-168 (220)
39 3ztl_A Thioredoxin peroxidase; 99.8 2E-18 7E-23 159.3 14.2 155 181-387 38-200 (222)
40 1uul_A Tryparedoxin peroxidase 99.8 4.4E-18 1.5E-22 153.7 15.3 153 181-386 4-166 (202)
41 2bmx_A Alkyl hydroperoxidase C 99.8 3.1E-18 1.1E-22 153.6 14.2 158 182-385 3-170 (195)
42 2a4v_A Peroxiredoxin DOT5; yea 99.8 1.8E-18 6.2E-23 149.6 11.1 145 182-383 6-152 (159)
43 1qmv_A Human thioredoxin perox 99.7 2.3E-17 7.9E-22 148.2 15.4 151 182-386 4-164 (197)
44 1zof_A Alkyl hydroperoxide-red 99.7 2.2E-17 7.6E-22 148.1 13.9 151 184-387 2-163 (198)
45 3a2v_A Probable peroxiredoxin; 99.7 3.4E-17 1.2E-21 156.2 14.6 150 183-386 5-163 (249)
46 3kcm_A Thioredoxin family prot 99.7 1.4E-16 4.7E-21 135.0 12.0 141 184-387 3-145 (154)
47 2f9s_A Thiol-disulfide oxidore 99.7 4.5E-16 1.5E-20 132.0 12.9 144 185-393 2-146 (151)
48 3gl3_A Putative thiol:disulfid 99.7 5.4E-16 1.8E-20 131.0 13.1 138 183-384 3-141 (152)
49 2ywi_A Hypothetical conserved 99.7 1.4E-15 4.7E-20 134.6 14.8 147 181-388 16-177 (196)
50 2lrn_A Thiol:disulfide interch 99.7 6.3E-16 2.2E-20 131.8 12.1 141 183-391 3-147 (152)
51 3u5r_E Uncharacterized protein 99.6 1.3E-15 4.3E-20 139.8 13.9 147 181-387 30-189 (218)
52 2l5o_A Putative thioredoxin; s 99.6 2.4E-15 8.4E-20 127.1 14.1 143 183-391 2-147 (153)
53 3ewl_A Uncharacterized conserv 99.6 2.3E-15 7.8E-20 126.1 13.5 133 184-384 2-140 (142)
54 1xzo_A BSSCO, hypothetical pro 99.6 3.5E-15 1.2E-19 129.0 14.0 158 179-384 3-171 (174)
55 3hcz_A Possible thiol-disulfid 99.6 1.3E-15 4.6E-20 127.1 10.8 138 181-383 3-144 (148)
56 2lrt_A Uncharacterized protein 99.6 5.5E-15 1.9E-19 127.2 14.4 137 180-382 6-145 (152)
57 3eyt_A Uncharacterized protein 99.6 4.9E-15 1.7E-19 126.2 12.4 138 185-386 2-153 (158)
58 3fw2_A Thiol-disulfide oxidore 99.6 8.9E-15 3E-19 124.4 13.8 136 182-385 4-148 (150)
59 3hdc_A Thioredoxin family prot 99.6 7.8E-15 2.7E-19 126.0 13.4 138 180-383 12-150 (158)
60 3fkf_A Thiol-disulfide oxidore 99.6 5.3E-15 1.8E-19 123.5 11.9 135 182-384 4-145 (148)
61 3erw_A Sporulation thiol-disul 99.6 6.1E-15 2.1E-19 122.4 12.1 137 177-380 3-144 (145)
62 3or5_A Thiol:disulfide interch 99.6 1.2E-14 4E-19 124.1 14.1 148 181-388 6-154 (165)
63 1jfu_A Thiol:disulfide interch 99.6 7.4E-15 2.5E-19 129.1 12.7 145 182-385 33-180 (186)
64 3kh7_A Thiol:disulfide interch 99.6 2.4E-14 8.1E-19 126.5 15.4 138 181-387 28-169 (176)
65 3ia1_A THIO-disulfide isomeras 99.6 1.2E-14 4.1E-19 123.3 11.2 139 182-390 4-149 (154)
66 3lwa_A Secreted thiol-disulfid 99.6 2.2E-14 7.4E-19 126.1 13.1 144 182-385 30-181 (183)
67 2cvb_A Probable thiol-disulfid 99.6 1.3E-14 4.5E-19 128.0 11.6 145 181-387 5-161 (188)
68 3eur_A Uncharacterized protein 99.6 2.4E-14 8.1E-19 120.6 12.4 132 182-381 4-141 (142)
69 3lor_A Thiol-disulfide isomera 99.5 3.5E-14 1.2E-18 120.8 12.1 122 217-385 19-155 (160)
70 2obi_A PHGPX, GPX-4, phospholi 99.5 3E-14 1E-18 126.0 11.9 155 175-383 13-182 (183)
71 4fo5_A Thioredoxin-like protei 99.5 2.7E-14 9.2E-19 120.5 11.0 133 180-381 4-141 (143)
72 3raz_A Thioredoxin-related pro 99.5 4.3E-14 1.5E-18 120.3 12.0 130 217-391 13-146 (151)
73 2ls5_A Uncharacterized protein 99.3 6.3E-16 2.2E-20 132.4 0.0 144 182-386 6-152 (159)
74 2v1m_A Glutathione peroxidase; 99.5 5.5E-14 1.9E-18 120.6 11.8 147 182-384 4-166 (169)
75 2b5x_A YKUV protein, TRXY; thi 99.5 1.2E-13 4.3E-18 114.8 13.6 136 184-384 2-144 (148)
76 1lu4_A Soluble secreted antige 99.5 1.3E-13 4.4E-18 113.4 13.4 121 217-383 13-134 (136)
77 1zzo_A RV1677; thioredoxin fol 99.5 2E-13 6.9E-18 111.7 14.3 119 217-384 14-134 (136)
78 2lja_A Putative thiol-disulfid 99.5 4E-14 1.4E-18 119.5 9.4 140 183-387 3-145 (152)
79 2b1k_A Thiol:disulfide interch 99.5 2.2E-13 7.5E-18 117.5 14.1 137 182-384 21-159 (168)
80 4evm_A Thioredoxin family prot 99.5 2.7E-13 9.2E-18 110.3 13.3 119 217-383 11-137 (138)
81 2gs3_A PHGPX, GPX-4, phospholi 99.5 1.3E-13 4.5E-18 122.5 11.6 148 181-382 21-183 (185)
82 3ha9_A Uncharacterized thiored 99.5 7.6E-14 2.6E-18 120.1 9.0 133 183-384 11-163 (165)
83 2hyx_A Protein DIPZ; thioredox 99.5 3.7E-13 1.3E-17 134.1 15.2 151 171-387 39-201 (352)
84 2p5q_A Glutathione peroxidase 99.5 1.2E-13 4.3E-18 118.5 9.9 144 182-384 5-167 (170)
85 3me7_A Putative uncharacterize 99.5 3E-13 1E-17 119.2 11.9 146 184-385 2-162 (170)
86 2vup_A Glutathione peroxidase- 99.5 3.8E-13 1.3E-17 119.9 12.7 149 182-385 21-185 (190)
87 1kng_A Thiol:disulfide interch 99.4 1.7E-12 6E-17 109.5 14.5 144 181-384 6-151 (156)
88 3dwv_A Glutathione peroxidase- 99.4 4.2E-13 1.4E-17 119.6 11.2 146 181-384 18-182 (187)
89 3cmi_A Peroxiredoxin HYR1; thi 99.4 2.3E-13 7.9E-18 118.7 9.3 125 217-384 21-167 (171)
90 2k6v_A Putative cytochrome C o 99.4 2.3E-13 7.7E-18 117.1 9.0 147 183-383 10-171 (172)
91 2ggt_A SCO1 protein homolog, m 99.4 1.1E-12 3.7E-17 112.0 12.9 135 217-385 12-161 (164)
92 2h30_A Thioredoxin, peptide me 99.4 8.3E-13 2.9E-17 112.7 12.2 122 217-385 27-156 (164)
93 2p31_A CL683, glutathione pero 99.4 2.9E-13 9.9E-18 119.8 8.1 146 182-383 22-179 (181)
94 2rli_A SCO2 protein homolog, m 99.4 5E-12 1.7E-16 108.8 14.5 137 217-387 15-166 (171)
95 3kij_A Probable glutathione pe 99.4 1.4E-12 4.6E-17 115.2 10.1 92 182-295 11-112 (180)
96 2b7k_A SCO1 protein; metalloch 99.4 3.8E-12 1.3E-16 114.9 12.2 141 217-384 30-182 (200)
97 2f8a_A Glutathione peroxidase 99.4 8.4E-12 2.9E-16 114.4 14.3 170 172-384 12-206 (208)
98 2i3y_A Epididymal secretory gl 99.3 2E-11 6.8E-16 113.4 15.9 159 184-385 30-211 (215)
99 2r37_A Glutathione peroxidase 99.3 3.4E-11 1.2E-15 110.9 15.1 145 217-385 26-193 (207)
100 1i5g_A Tryparedoxin II; electr 99.3 5E-12 1.7E-16 106.3 7.6 108 217-365 17-129 (144)
101 4hde_A SCO1/SENC family lipopr 99.3 2.7E-10 9.1E-15 100.8 17.3 149 185-384 8-169 (170)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.2 8.1E-12 2.8E-16 105.5 6.4 109 217-367 18-131 (146)
103 3s9f_A Tryparedoxin; thioredox 99.2 6.6E-12 2.3E-16 109.9 4.3 126 177-363 16-147 (165)
104 1o73_A Tryparedoxin; electron 99.2 3.5E-11 1.2E-15 100.7 8.5 105 217-363 18-127 (144)
105 2lus_A Thioredoxion; CR-Trp16, 98.8 1.6E-12 5.5E-17 108.2 0.0 112 217-368 13-131 (143)
106 4h86_A Peroxiredoxin type-2; o 98.7 8.8E-08 3E-12 89.1 11.3 129 219-379 58-198 (199)
107 2l57_A Uncharacterized protein 98.4 2.6E-06 8.9E-11 69.9 11.0 97 227-388 24-120 (126)
108 2ju5_A Thioredoxin disulfide i 98.2 1.5E-06 5.1E-11 75.0 6.8 112 218-384 37-151 (154)
109 2fwh_A Thiol:disulfide interch 98.1 2.2E-06 7.4E-11 71.9 4.8 103 220-387 23-130 (134)
110 2pu9_C TRX-F, thioredoxin F-ty 97.9 0.00014 4.8E-09 57.9 11.4 86 229-383 24-109 (111)
111 2kuc_A Putative disulphide-iso 97.9 4.7E-05 1.6E-09 62.3 8.8 94 228-386 26-122 (130)
112 3fk8_A Disulphide isomerase; A 97.9 4.6E-05 1.6E-09 62.9 8.7 101 228-384 28-132 (133)
113 1faa_A Thioredoxin F; electron 97.8 0.0002 6.9E-09 58.1 11.1 41 228-271 36-76 (124)
114 2e0q_A Thioredoxin; electron t 97.8 0.00015 5.3E-09 55.8 9.7 46 224-271 10-55 (104)
115 3hxs_A Thioredoxin, TRXP; elec 97.7 0.0001 3.6E-09 61.2 7.6 81 215-298 38-118 (141)
116 1thx_A Thioredoxin, thioredoxi 97.7 0.00043 1.5E-08 54.7 10.9 88 229-384 25-112 (115)
117 2voc_A Thioredoxin; electron t 97.6 0.00022 7.7E-09 57.2 8.9 94 224-385 12-105 (112)
118 2vlu_A Thioredoxin, thioredoxi 97.6 0.00046 1.6E-08 55.7 10.8 40 229-271 34-73 (122)
119 3emx_A Thioredoxin; structural 97.5 0.0002 6.9E-09 59.9 7.6 103 224-388 27-129 (135)
120 3d22_A TRXH4, thioredoxin H-ty 97.5 0.001 3.5E-08 55.1 11.0 41 228-271 45-85 (139)
121 1w4v_A Thioredoxin, mitochondr 97.5 0.001 3.5E-08 54.0 10.7 41 229-271 31-71 (119)
122 2f51_A Thioredoxin; electron t 97.4 3.9E-05 1.3E-09 62.9 1.9 76 217-294 9-85 (118)
123 3die_A Thioredoxin, TRX; elect 97.4 0.00025 8.4E-09 55.3 6.0 73 224-298 14-86 (106)
124 1xfl_A Thioredoxin H1; AT3G510 97.4 0.0012 4E-08 54.5 10.3 40 229-271 38-77 (124)
125 2j23_A Thioredoxin; immune pro 97.4 0.00025 8.5E-09 58.0 6.0 74 223-296 26-99 (121)
126 2vim_A Thioredoxin, TRX; thior 97.2 0.00047 1.6E-08 53.5 5.9 65 229-296 19-83 (104)
127 2i4a_A Thioredoxin; acidophIle 97.2 0.0005 1.7E-08 53.6 5.7 62 229-292 20-81 (107)
128 1sen_A Thioredoxin-like protei 97.2 0.00021 7.3E-09 62.3 3.5 70 227-298 44-116 (164)
129 3hz4_A Thioredoxin; NYSGXRC, P 97.1 0.0036 1.2E-07 52.4 10.7 41 229-271 24-64 (140)
130 3f3q_A Thioredoxin-1; His TAG, 97.1 0.00085 2.9E-08 53.8 5.9 77 220-298 14-90 (109)
131 3uvt_A Thioredoxin domain-cont 97.0 0.00084 2.9E-08 52.7 5.5 74 223-297 15-90 (111)
132 2vm1_A Thioredoxin, thioredoxi 97.0 0.0013 4.4E-08 52.3 6.4 62 229-293 28-89 (118)
133 3d6i_A Monothiol glutaredoxin- 97.0 0.0017 5.8E-08 51.5 6.8 65 229-294 21-85 (112)
134 1nsw_A Thioredoxin, TRX; therm 96.9 0.0014 4.6E-08 51.2 6.0 67 225-293 12-79 (105)
135 2dj1_A Protein disulfide-isome 96.9 0.002 7E-08 53.0 7.4 72 224-295 28-101 (140)
136 1fb6_A Thioredoxin M; electron 96.9 0.0021 7.2E-08 49.8 6.9 62 229-292 18-79 (105)
137 1syr_A Thioredoxin; SGPP, stru 96.9 0.0012 4E-08 52.8 5.5 64 223-288 19-82 (112)
138 3aps_A DNAJ homolog subfamily 96.9 0.0019 6.6E-08 51.9 6.6 70 229-300 21-90 (122)
139 3m9j_A Thioredoxin; oxidoreduc 96.9 0.0016 5.4E-08 50.7 5.7 66 229-297 20-85 (105)
140 1t00_A Thioredoxin, TRX; redox 96.8 0.0022 7.5E-08 50.7 6.6 58 229-288 23-80 (112)
141 2yzu_A Thioredoxin; redox prot 96.8 0.0015 5.1E-08 50.7 5.5 67 225-293 13-80 (109)
142 3qfa_C Thioredoxin; protein-pr 96.8 0.002 6.8E-08 52.3 6.2 64 229-295 31-94 (116)
143 2l5l_A Thioredoxin; structural 96.8 0.0021 7.1E-08 53.5 6.4 68 229-298 38-105 (136)
144 1xwb_A Thioredoxin; dimerizati 96.8 0.0023 7.9E-08 49.7 6.2 61 229-291 20-80 (106)
145 1ep7_A Thioredoxin CH1, H-type 96.8 0.0014 4.9E-08 51.6 5.1 58 229-288 24-81 (112)
146 2oe3_A Thioredoxin-3; electron 96.8 0.0013 4.4E-08 53.5 4.9 67 223-291 23-89 (114)
147 3tco_A Thioredoxin (TRXA-1); d 96.8 0.002 6.9E-08 50.1 5.6 70 225-295 16-85 (109)
148 1x5d_A Protein disulfide-isome 96.7 0.0024 8.2E-08 51.9 6.2 68 229-296 24-94 (133)
149 4euy_A Uncharacterized protein 96.7 0.0017 5.9E-08 51.2 5.0 73 223-297 11-83 (105)
150 2dml_A Protein disulfide-isome 96.7 0.0023 7.9E-08 52.0 5.6 67 229-297 35-101 (130)
151 3ul3_B Thioredoxin, thioredoxi 96.6 0.0034 1.2E-07 51.5 6.4 69 228-298 41-109 (128)
152 1dby_A Chloroplast thioredoxin 96.6 0.0046 1.6E-07 48.3 6.8 62 229-292 19-80 (107)
153 2yj7_A LPBCA thioredoxin; oxid 95.6 0.00035 1.2E-08 54.0 0.0 43 229-273 19-61 (106)
154 3gnj_A Thioredoxin domain prot 96.6 0.0039 1.3E-07 48.9 6.0 67 228-296 21-87 (111)
155 2xc2_A Thioredoxinn; oxidoredu 96.6 0.0041 1.4E-07 49.8 6.3 57 228-288 32-88 (117)
156 1ti3_A Thioredoxin H, PTTRXH1; 96.5 0.004 1.4E-07 49.0 6.0 64 230-295 26-89 (113)
157 2trx_A Thioredoxin; electron t 96.5 0.0049 1.7E-07 48.2 6.5 64 228-292 18-81 (108)
158 2i1u_A Thioredoxin, TRX, MPT46 96.5 0.0054 1.8E-07 48.9 6.6 63 229-293 30-92 (121)
159 2dj3_A Protein disulfide-isome 96.4 0.0029 1E-07 51.6 4.3 68 229-297 25-93 (133)
160 3idv_A Protein disulfide-isome 96.3 0.0064 2.2E-07 54.4 6.8 72 224-295 26-99 (241)
161 1gh2_A Thioredoxin-like protei 96.3 0.0069 2.3E-07 47.6 6.2 62 229-293 21-82 (107)
162 1x5e_A Thioredoxin domain cont 96.3 0.0069 2.4E-07 49.1 6.2 67 224-292 18-84 (126)
163 2wz9_A Glutaredoxin-3; protein 96.3 0.0049 1.7E-07 52.5 5.3 65 229-296 32-96 (153)
164 2lst_A Thioredoxin; structural 95.2 0.00074 2.5E-08 55.2 0.0 75 218-295 9-88 (130)
165 1wmj_A Thioredoxin H-type; str 96.2 0.0012 4.2E-08 53.5 1.0 60 229-291 36-95 (130)
166 2l6c_A Thioredoxin; oxidoreduc 96.2 0.011 3.8E-07 47.2 6.7 69 224-295 14-82 (110)
167 2djj_A PDI, protein disulfide- 96.2 0.0057 2E-07 48.9 5.0 43 228-271 24-70 (121)
168 3zzx_A Thioredoxin; oxidoreduc 96.1 0.045 1.5E-06 44.3 10.3 85 229-383 20-104 (105)
169 1mek_A Protein disulfide isome 96.1 0.0025 8.6E-08 50.3 2.6 71 225-295 19-91 (120)
170 3p2a_A Thioredoxin 2, putative 96.1 0.0097 3.3E-07 49.9 6.2 68 228-297 54-121 (148)
171 2o8v_B Thioredoxin 1; disulfid 96.1 0.0071 2.4E-07 50.1 5.2 64 228-292 38-101 (128)
172 2ppt_A Thioredoxin-2; thiredox 96.0 0.014 4.9E-07 50.1 7.2 72 223-296 57-129 (155)
173 1r26_A Thioredoxin; redox-acti 96.0 0.0073 2.5E-07 50.0 5.0 61 225-288 32-93 (125)
174 1wou_A Thioredoxin -related pr 95.9 0.012 4.3E-07 48.0 6.1 42 229-272 24-72 (123)
175 3cxg_A Putative thioredoxin; m 95.9 0.012 4.1E-07 49.0 6.1 59 231-292 41-99 (133)
176 3ira_A Conserved protein; meth 95.9 0.036 1.2E-06 49.8 9.5 42 345-387 105-149 (173)
177 1z6n_A Hypothetical protein PA 95.9 0.0069 2.4E-07 53.7 4.7 67 230-298 54-123 (167)
178 3f9u_A Putative exported cytoc 95.8 0.0066 2.3E-07 52.2 4.2 44 228-273 46-92 (172)
179 1v98_A Thioredoxin; oxidoreduc 95.8 0.015 5E-07 48.3 6.0 64 228-293 49-112 (140)
180 3dxb_A Thioredoxin N-terminall 95.7 0.014 4.9E-07 52.8 6.0 68 228-297 29-96 (222)
181 2dj0_A Thioredoxin-related tra 95.6 0.0062 2.1E-07 50.5 3.0 68 231-299 28-101 (137)
182 3h79_A Thioredoxin-like protei 95.5 0.035 1.2E-06 45.1 7.1 67 229-296 33-103 (127)
183 3gix_A Thioredoxin-like protei 95.2 0.039 1.3E-06 47.1 6.7 69 229-298 22-90 (149)
184 3ph9_A Anterior gradient prote 95.1 0.027 9.1E-07 49.3 5.5 74 228-304 43-120 (151)
185 3q6o_A Sulfhydryl oxidase 1; p 95.1 0.04 1.4E-06 50.2 6.9 67 228-294 28-98 (244)
186 1zma_A Bacterocin transport ac 95.0 0.031 1.1E-06 44.8 5.3 39 229-271 29-67 (118)
187 1fo5_A Thioredoxin; disulfide 94.9 0.018 6.3E-07 42.8 3.4 59 232-291 4-62 (85)
188 1nho_A Probable thioredoxin; b 94.8 0.022 7.4E-07 42.4 3.7 57 234-291 5-61 (85)
189 1qgv_A Spliceosomal protein U5 94.5 0.045 1.5E-06 46.3 5.3 73 229-303 23-95 (142)
190 2b5e_A Protein disulfide-isome 94.3 0.065 2.2E-06 54.1 6.8 73 223-295 24-96 (504)
191 3ed3_A Protein disulfide-isome 94.3 0.053 1.8E-06 51.9 5.8 67 229-297 35-103 (298)
192 1wjk_A C330018D20RIK protein; 94.2 0.13 4.5E-06 41.1 7.2 49 218-272 4-52 (100)
193 1a8l_A Protein disulfide oxido 94.2 0.087 3E-06 46.8 6.8 64 229-292 133-199 (226)
194 3apq_A DNAJ homolog subfamily 94.2 0.048 1.7E-06 48.6 5.0 63 228-292 113-175 (210)
195 3idv_A Protein disulfide-isome 94.2 0.044 1.5E-06 48.9 4.7 72 224-295 141-214 (241)
196 3f8u_A Protein disulfide-isome 93.8 0.091 3.1E-06 52.5 6.7 67 229-297 370-437 (481)
197 3qou_A Protein YBBN; thioredox 93.8 0.054 1.8E-06 50.2 4.7 63 229-293 26-88 (287)
198 2trc_P Phosducin, MEKA, PP33; 93.4 0.062 2.1E-06 49.3 4.4 65 230-298 121-185 (217)
199 3qcp_A QSOX from trypanosoma b 92.6 0.18 6.2E-06 52.1 6.9 66 230-296 43-115 (470)
200 1eej_A Thiol:disulfide interch 92.4 0.067 2.3E-06 48.4 3.0 38 229-270 85-122 (216)
201 2ywm_A Glutaredoxin-like prote 92.4 0.21 7.2E-06 44.5 6.2 61 229-291 135-195 (229)
202 3gyk_A 27KDA outer membrane pr 92.1 0.13 4.4E-06 44.1 4.4 48 218-269 12-59 (175)
203 2hls_A Protein disulfide oxido 92.1 0.28 9.7E-06 45.2 6.9 62 230-291 138-202 (243)
204 1wik_A Thioredoxin-like protei 92.0 0.39 1.3E-05 38.7 6.8 40 223-270 8-51 (109)
205 3kp8_A Vkorc1/thioredoxin doma 91.9 0.041 1.4E-06 44.7 0.9 38 220-259 4-41 (106)
206 2b5e_A Protein disulfide-isome 91.8 0.21 7.2E-06 50.3 6.1 43 228-271 375-419 (504)
207 2r2j_A Thioredoxin domain-cont 91.7 0.15 5.1E-06 49.9 4.8 63 225-287 17-84 (382)
208 2e7p_A Glutaredoxin; thioredox 91.6 0.095 3.3E-06 41.7 2.7 31 224-256 14-44 (116)
209 1oaz_A Thioredoxin 1; immune s 91.5 0.18 6E-06 41.3 4.3 64 228-292 19-96 (123)
210 2dbc_A PDCL2, unnamed protein 91.4 0.27 9.1E-06 40.9 5.4 68 232-304 32-99 (135)
211 1t3b_A Thiol:disulfide interch 91.2 0.15 5.2E-06 46.0 4.0 37 229-269 85-121 (211)
212 2kso_A Ephrin type-A receptor 91.1 0.051 1.8E-06 43.2 0.6 53 36-89 16-70 (82)
213 1z6m_A Conserved hypothetical 91.1 0.2 6.8E-06 43.0 4.4 49 220-270 19-68 (175)
214 1b4f_A EPHB2; SAM domain, EPH 91.0 0.043 1.5E-06 43.3 0.0 51 38-89 13-65 (82)
215 1a8l_A Protein disulfide oxido 90.8 0.6 2.1E-05 41.2 7.4 43 229-273 21-64 (226)
216 3l9v_A Putative thiol-disulfid 90.7 0.13 4.4E-06 45.6 2.9 39 229-269 14-55 (189)
217 3hd5_A Thiol:disulfide interch 90.6 0.18 6.2E-06 44.1 3.8 40 229-269 24-63 (195)
218 2es7_A Q8ZP25_salty, putative 90.5 0.096 3.3E-06 44.8 1.9 76 223-300 27-106 (142)
219 3sei_A Caskin-1; SAM domain, p 90.5 0.093 3.2E-06 46.1 1.8 55 35-90 9-64 (149)
220 2yan_A Glutaredoxin-3; oxidore 90.4 0.16 5.5E-06 40.6 3.0 31 223-254 10-44 (105)
221 3f8u_A Protein disulfide-isome 90.3 0.35 1.2E-05 48.3 6.0 64 223-287 11-77 (481)
222 1sji_A Calsequestrin 2, calseq 90.2 0.22 7.4E-06 47.9 4.3 64 223-287 21-91 (350)
223 1ilo_A Conserved hypothetical 90.0 0.63 2.2E-05 33.8 5.8 54 233-291 3-56 (77)
224 2qkq_A Ephrin type-B receptor 89.9 0.077 2.6E-06 41.9 0.7 51 38-89 17-69 (83)
225 1ucv_A Ephrin type-A receptor 89.9 0.087 3E-06 41.5 0.9 51 38-89 9-61 (81)
226 1kw4_A Polyhomeotic; SAM domai 89.8 0.094 3.2E-06 42.3 1.1 55 35-89 18-73 (89)
227 2f3n_A SH3 and multiple ankyri 89.6 0.097 3.3E-06 40.6 1.0 52 37-89 8-60 (76)
228 1a0r_P Phosducin, MEKA, PP33; 89.4 0.27 9.1E-06 46.4 4.1 72 229-304 133-204 (245)
229 2e8n_A Ephrin type-A receptor 89.3 0.13 4.4E-06 41.2 1.6 51 38-89 14-66 (88)
230 3k1r_B Usher syndrome type-1G 89.0 0.11 3.7E-06 40.6 0.9 51 37-88 3-53 (74)
231 3hil_A Ephrin type-A receptor 88.9 0.11 3.9E-06 41.3 1.0 51 37-88 24-76 (82)
232 1b0x_A Protein (EPHA4 receptor 88.8 0.073 2.5E-06 43.2 -0.2 51 37-88 27-79 (94)
233 3h93_A Thiol:disulfide interch 88.6 0.32 1.1E-05 42.4 3.8 31 229-259 24-54 (192)
234 3t58_A Sulfhydryl oxidase 1; o 88.6 0.65 2.2E-05 48.2 6.7 67 228-294 28-98 (519)
235 3sei_A Caskin-1; SAM domain, p 88.2 0.13 4.5E-06 45.1 1.0 51 38-89 81-133 (149)
236 3apo_A DNAJ homolog subfamily 87.9 0.76 2.6E-05 48.9 6.8 66 229-296 675-740 (780)
237 3bq7_A Diacylglycerol kinase d 87.9 0.16 5.5E-06 39.8 1.2 53 36-89 12-65 (81)
238 1v58_A Thiol:disulfide interch 87.9 0.4 1.4E-05 44.2 4.1 38 229-269 96-133 (241)
239 2gle_A Neurabin-1; SAM domain, 87.6 0.13 4.5E-06 39.4 0.5 50 38-88 11-61 (74)
240 3c1r_A Glutaredoxin-1; oxidize 87.5 0.2 7E-06 41.3 1.7 24 223-248 18-41 (118)
241 2k8s_A Thioredoxin; dimer, str 87.5 0.42 1.4E-05 35.9 3.3 32 235-269 5-36 (80)
242 1ego_A Glutaredoxin; electron 87.4 0.49 1.7E-05 35.3 3.7 35 234-270 3-37 (85)
243 3uem_A Protein disulfide-isome 87.4 0.52 1.8E-05 45.0 4.7 65 229-295 266-331 (361)
244 1h75_A Glutaredoxin-like prote 87.4 0.93 3.2E-05 33.6 5.2 32 234-272 3-34 (81)
245 1kte_A Thioltransferase; redox 85.7 0.5 1.7E-05 37.0 3.1 31 223-255 5-35 (105)
246 2rem_A Disulfide oxidoreductas 85.7 0.58 2E-05 40.5 3.7 40 229-269 24-63 (193)
247 2eao_A Ephrin type-B receptor 85.5 0.2 6.8E-06 40.9 0.6 52 37-89 23-76 (99)
248 3dml_A Putative uncharacterize 85.5 0.45 1.5E-05 40.1 2.8 27 230-257 19-45 (116)
249 1r7h_A NRDH-redoxin; thioredox 85.4 1.5 5.1E-05 31.7 5.3 32 234-272 3-34 (75)
250 3h8m_A Ephrin type-A receptor 85.3 0.23 8E-06 40.1 0.9 51 38-89 27-79 (90)
251 3iv4_A Putative oxidoreductase 84.9 0.51 1.7E-05 39.8 2.8 35 223-257 17-51 (112)
252 3bs5_B Connector enhancer of k 84.4 0.36 1.2E-05 37.4 1.6 51 37-88 10-63 (80)
253 3apo_A DNAJ homolog subfamily 84.4 1.5 5.2E-05 46.6 6.9 69 223-294 450-518 (780)
254 3hz8_A Thiol:disulfide interch 84.3 0.83 2.8E-05 40.4 4.2 32 229-260 23-54 (193)
255 2wci_A Glutaredoxin-4; redox-a 84.3 1.3 4.3E-05 38.0 5.2 32 223-255 28-63 (135)
256 3evi_A Phosducin-like protein 84.1 1 3.5E-05 37.3 4.4 38 232-271 25-62 (118)
257 3gv1_A Disulfide interchange p 83.9 1 3.5E-05 38.8 4.5 36 228-269 12-47 (147)
258 3h8q_A Thioredoxin reductase 3 83.9 0.45 1.5E-05 38.8 2.0 31 223-255 10-40 (114)
259 3rhb_A ATGRXC5, glutaredoxin-C 83.9 0.44 1.5E-05 38.3 2.0 30 223-254 12-41 (113)
260 2dlx_A UBX domain-containing p 83.1 2 7E-05 37.3 6.1 65 229-295 42-111 (153)
261 3gx8_A Monothiol glutaredoxin- 83.0 0.65 2.2E-05 38.8 2.7 32 223-255 9-44 (121)
262 3feu_A Putative lipoprotein; a 82.6 0.5 1.7E-05 41.7 1.9 30 229-259 22-51 (185)
263 3ga4_A Dolichyl-diphosphooligo 82.6 2.8 9.6E-05 37.7 6.9 31 230-260 38-74 (178)
264 2cq9_A GLRX2 protein, glutared 82.5 0.36 1.2E-05 40.3 0.9 31 223-255 20-50 (130)
265 3ipz_A Monothiol glutaredoxin- 82.4 0.83 2.8E-05 37.1 3.1 32 223-255 11-46 (109)
266 2kiv_A Ankyrin repeat and ster 82.2 0.42 1.4E-05 41.6 1.3 51 38-88 90-142 (148)
267 1fov_A Glutaredoxin 3, GRX3; a 81.9 2.1 7.1E-05 31.5 4.9 20 235-254 4-23 (82)
268 1v85_A Similar to ring finger 81.9 0.48 1.7E-05 38.0 1.4 55 35-89 21-79 (91)
269 3zyw_A Glutaredoxin-3; metal b 81.6 0.91 3.1E-05 37.2 3.1 32 223-255 9-44 (111)
270 2znm_A Thiol:disulfide interch 81.5 0.44 1.5E-05 41.4 1.2 30 229-258 21-50 (195)
271 3kka_C Ephrin type-A receptor 81.5 0.51 1.7E-05 37.8 1.4 52 37-89 22-75 (86)
272 2kg5_A ARF-GAP, RHO-GAP domain 81.2 0.54 1.8E-05 38.7 1.5 54 36-90 26-81 (100)
273 1hyu_A AHPF, alkyl hydroperoxi 80.5 2.4 8.2E-05 43.2 6.4 57 229-287 116-172 (521)
274 2ht9_A Glutaredoxin-2; thiored 80.1 0.47 1.6E-05 40.9 0.9 30 223-254 42-71 (146)
275 2fgx_A Putative thioredoxin; N 79.7 1.2 4.3E-05 36.7 3.3 35 233-270 31-65 (107)
276 2khp_A Glutaredoxin; thioredox 79.6 3 0.0001 31.7 5.3 21 234-254 8-28 (92)
277 3l78_A Regulatory protein SPX; 79.5 1.4 4.7E-05 36.7 3.5 64 234-305 2-70 (120)
278 2klx_A Glutaredoxin; thioredox 79.5 0.95 3.3E-05 34.5 2.4 21 234-254 8-28 (89)
279 1z3e_A Regulatory protein SPX; 79.2 4.3 0.00015 34.0 6.6 64 234-305 3-71 (132)
280 4dvc_A Thiol:disulfide interch 77.9 2 6.8E-05 36.4 4.1 39 229-269 21-59 (184)
281 1un2_A DSBA, thiol-disulfide i 77.7 1.1 3.9E-05 40.2 2.6 39 229-269 113-154 (197)
282 2ean_A Connector enhancer of k 77.5 0.9 3.1E-05 35.5 1.7 51 37-88 14-67 (83)
283 3msz_A Glutaredoxin 1; alpha-b 77.5 1.4 4.6E-05 33.0 2.6 21 234-254 6-26 (89)
284 1x40_A ARAP2; ASAP-related pro 77.5 0.5 1.7E-05 38.1 0.2 52 37-89 16-69 (91)
285 3bs5_A Protein aveugle; sterIl 77.5 0.92 3.2E-05 37.6 1.8 54 35-89 27-83 (106)
286 3us3_A Calsequestrin-1; calciu 77.0 3.3 0.00011 40.2 6.0 59 224-282 24-88 (367)
287 1pn0_A Phenol 2-monooxygenase; 76.9 23 0.00078 37.4 12.8 127 217-387 495-648 (665)
288 1pk1_B Sex COMB on midleg CG94 76.9 0.85 2.9E-05 36.8 1.4 54 36-89 19-74 (89)
289 3ctg_A Glutaredoxin-2; reduced 76.7 0.69 2.4E-05 38.9 0.8 29 223-253 30-59 (129)
290 2k4p_A Phosphatidylinositol-3, 76.7 0.62 2.1E-05 37.4 0.5 50 38-88 28-79 (86)
291 3bs7_A Protein aveugle; sterIl 76.6 0.93 3.2E-05 34.8 1.5 51 38-89 10-63 (78)
292 2ywm_A Glutaredoxin-like prote 76.5 4.3 0.00015 35.8 6.1 54 229-282 20-78 (229)
293 2wem_A Glutaredoxin-related pr 76.3 1.5 5E-05 36.6 2.8 35 220-255 10-48 (118)
294 2eam_A Putative 47 kDa protein 75.9 0.6 2E-05 36.4 0.2 51 38-89 14-68 (80)
295 2k6l_A Putative uncharacterize 75.4 0.52 1.8E-05 34.7 -0.3 19 72-90 21-39 (51)
296 1ttz_A Conserved hypothetical 75.0 1.2 4E-05 35.1 1.7 22 234-255 3-24 (87)
297 3nzn_A Glutaredoxin; structura 74.4 1.6 5.4E-05 34.6 2.4 22 234-255 24-45 (103)
298 2kiv_A Ankyrin repeat and ster 74.0 0.81 2.8E-05 39.8 0.6 52 37-89 15-70 (148)
299 3fz4_A Putative arsenate reduc 73.9 2.2 7.5E-05 35.6 3.2 65 233-305 4-73 (120)
300 3f0i_A Arsenate reductase; str 73.8 2.8 9.6E-05 34.9 3.9 64 234-305 6-75 (119)
301 3rdw_A Putative arsenate reduc 73.7 2.4 8.2E-05 35.4 3.5 64 234-305 7-76 (121)
302 3gkx_A Putative ARSC family re 73.1 1.7 5.9E-05 36.3 2.4 64 234-305 6-74 (120)
303 1t1v_A SH3BGRL3, SH3 domain-bi 72.5 6.8 0.00023 30.2 5.6 30 235-270 5-39 (93)
304 3l4n_A Monothiol glutaredoxin- 72.1 2.3 7.8E-05 35.9 2.9 31 223-255 7-37 (127)
305 2qgv_A Hydrogenase-1 operon pr 72.1 2.8 9.4E-05 36.4 3.5 42 228-270 33-76 (140)
306 2dl0_A SAM and SH3 domain-cont 71.7 0.83 2.8E-05 37.4 0.1 51 38-89 25-77 (97)
307 3ic4_A Glutaredoxin (GRX-1); s 71.5 1.5 5.3E-05 33.3 1.6 22 234-255 14-35 (92)
308 3gn3_A Putative protein-disulf 71.2 2.2 7.5E-05 37.8 2.7 43 227-269 11-53 (182)
309 3qmx_A Glutaredoxin A, glutare 71.1 1.6 5.3E-05 34.9 1.6 22 234-255 18-39 (99)
310 1s3c_A Arsenate reductase; ARS 70.7 1.8 6.3E-05 37.2 2.1 65 234-306 4-73 (141)
311 2hze_A Glutaredoxin-1; thiored 70.3 2.2 7.5E-05 34.3 2.4 29 224-254 13-41 (114)
312 3bci_A Disulfide bond protein 70.2 3.5 0.00012 35.5 3.8 41 229-269 10-52 (186)
313 2lqo_A Putative glutaredoxin R 67.3 2.5 8.5E-05 33.8 2.0 20 234-253 6-25 (92)
314 2kok_A Arsenate reductase; bru 66.3 3.6 0.00012 34.0 2.9 63 234-305 7-73 (120)
315 1v38_A SAM-domain protein sams 64.4 2.2 7.4E-05 33.3 1.1 50 38-88 14-65 (78)
316 3ihg_A RDME; flavoenzyme, anth 64.2 13 0.00045 37.4 7.2 83 217-364 434-516 (535)
317 2ke7_A Ankyrin repeat and ster 64.1 1.2 4.2E-05 36.5 -0.4 51 38-89 24-78 (103)
318 2av4_A Thioredoxin-like protei 63.9 8.4 0.00029 34.4 5.0 40 229-270 41-80 (160)
319 2e8o_A SAM domain and HD domai 63.7 1.4 4.6E-05 36.1 -0.2 53 35-88 31-86 (103)
320 1aba_A Glutaredoxin; electron 63.1 4.4 0.00015 30.8 2.7 20 235-254 3-26 (87)
321 3c7m_A Thiol:disulfide interch 60.6 7.5 0.00026 33.2 4.0 39 230-270 18-57 (195)
322 2qsi_A Putative hydrogenase ex 59.6 15 0.00052 31.6 5.7 29 232-260 35-65 (137)
323 2ct6_A SH3 domain-binding glut 59.6 9.2 0.00031 30.9 4.2 31 234-270 10-45 (111)
324 2d8c_A Phosphatidylcholine:cer 58.6 2.2 7.7E-05 34.8 0.2 53 35-89 21-75 (97)
325 3uem_A Protein disulfide-isome 57.5 27 0.00093 32.9 7.7 41 231-272 136-176 (361)
326 3gha_A Disulfide bond formatio 54.8 9.2 0.00031 34.0 3.7 25 228-252 27-51 (202)
327 3tdg_A DSBG, putative uncharac 54.3 4.7 0.00016 38.8 1.8 38 229-269 146-183 (273)
328 2hls_A Protein disulfide oxido 54.1 22 0.00075 32.3 6.2 33 223-255 17-52 (243)
329 2lmr_A ODIN, ankyrin repeat an 52.1 2.8 9.5E-05 34.6 -0.2 51 38-89 31-85 (101)
330 3gmf_A Protein-disulfide isome 49.9 12 0.00042 33.6 3.7 27 228-254 13-39 (205)
331 1rw1_A Conserved hypothetical 49.5 9.2 0.00032 31.1 2.6 64 234-305 2-68 (114)
332 2wul_A Glutaredoxin related pr 48.7 10 0.00035 31.8 2.8 32 222-254 12-47 (118)
333 2ec4_A FAS-associated factor 1 47.7 18 0.0006 32.2 4.3 46 228-274 53-101 (178)
334 3tad_C Liprin-beta-1; protein 47.1 5.7 0.00019 38.2 1.0 53 35-87 19-72 (265)
335 3f4s_A Alpha-DSBA1, putative u 46.6 15 0.00051 33.5 3.8 42 228-269 37-80 (226)
336 2in3_A Hypothetical protein; D 43.4 19 0.00065 31.3 3.8 39 231-270 7-45 (216)
337 3l9s_A Thiol:disulfide interch 41.2 8.7 0.0003 33.9 1.2 22 230-252 22-43 (191)
338 1wwv_A Connector enhancer of k 40.3 16 0.00056 29.3 2.6 49 38-89 18-69 (91)
339 1v38_A SAM-domain protein sams 39.0 12 0.00043 28.8 1.7 53 5-57 14-73 (78)
340 3pf6_A Hypothetical protein PP 38.7 15 0.00053 27.2 2.0 29 27-55 16-52 (62)
341 2dkh_A 3-hydroxybenzoate hydro 36.0 1.7E+02 0.0059 30.3 10.4 30 346-382 606-635 (639)
342 2axo_A Hypothetical protein AT 35.9 19 0.00067 34.4 2.8 27 230-256 41-68 (270)
343 1ucv_A Ephrin type-A receptor 35.9 18 0.00061 28.0 2.2 53 5-57 9-68 (81)
344 1xhj_A Nitrogen fixation prote 34.1 36 0.0012 27.3 3.7 48 210-259 19-73 (88)
345 1nm3_A Protein HI0572; hybrid, 32.1 16 0.00055 32.7 1.5 21 234-254 172-192 (241)
346 1r4w_A Glutathione S-transfera 31.4 35 0.0012 30.4 3.6 36 231-269 5-40 (226)
347 1b4f_A EPHB2; SAM domain, EPH 30.3 22 0.00075 27.4 1.8 52 5-56 13-71 (82)
348 1sen_A Thioredoxin-like protei 29.9 33 0.0011 29.0 3.0 42 345-387 104-150 (164)
349 2e8n_A Ephrin type-A receptor 29.4 23 0.00078 27.8 1.8 53 5-57 14-73 (88)
350 2jad_A Yellow fluorescent prot 29.2 31 0.001 34.5 3.1 28 223-252 254-281 (362)
351 1ic9_A TH10AOX; three stranded 29.1 16 0.00054 23.3 0.6 9 236-244 11-19 (29)
352 3tad_C Liprin-beta-1; protein 27.9 27 0.00092 33.5 2.3 66 21-88 78-144 (265)
353 3tac_B Liprin-alpha-2; transfe 27.1 20 0.00067 35.6 1.2 66 21-87 24-95 (334)
354 2djk_A PDI, protein disulfide- 26.9 1.2E+02 0.0042 24.2 6.0 62 229-293 23-86 (133)
355 2imf_A HCCA isomerase, 2-hydro 26.9 39 0.0013 29.4 3.0 33 234-269 3-35 (203)
356 3f9u_A Putative exported cytoc 25.9 37 0.0013 28.3 2.6 36 345-385 131-166 (172)
357 3kp9_A Vkorc1/thioredoxin doma 25.7 29 0.001 33.3 2.2 38 220-259 189-226 (291)
358 1x40_A ARAP2; ASAP-related pro 24.9 50 0.0017 26.1 3.0 54 4-57 16-76 (91)
359 2qc7_A ERP31, ERP28, endoplasm 24.5 1E+02 0.0034 28.4 5.5 43 224-270 16-61 (240)
360 3gl5_A Putative DSBA oxidoredu 24.3 42 0.0014 30.6 2.9 40 230-269 1-41 (239)
361 2kso_A Ephrin type-A receptor 24.2 33 0.0011 26.7 1.8 53 5-57 18-77 (82)
362 1b0x_A Protein (EPHA4 receptor 23.8 38 0.0013 26.9 2.1 52 5-56 28-86 (94)
363 3kzq_A Putative uncharacterize 23.7 52 0.0018 28.7 3.2 37 233-270 4-40 (208)
364 4f9z_D Endoplasmic reticulum r 22.9 1.2E+02 0.0043 26.6 5.7 49 223-272 123-172 (227)
365 3h8m_A Ephrin type-A receptor 20.3 38 0.0013 26.9 1.5 52 5-56 27-85 (90)
No 1
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.93 E-value=9e-27 Score=206.33 Aligned_cols=156 Identities=19% Similarity=0.181 Sum_probs=134.4
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~-~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
+++|+.||.|.|++. +|++++|+++.. ++++||+|||..|||.|+.++..|++.+++|++
T Consensus 5 l~vG~~aPdF~l~~~-------------------~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~ 65 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQ-------------------DFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK 65 (164)
T ss_dssp CCTTSBCCCCEEEBT-------------------TSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG
T ss_pred ccCCCCCcCcEeECC-------------------CCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc
Confidence 578999998888766 599999999874 578999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKG 340 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~G 340 (399)
.|+.+|+|+.++++. ++.|.+ +.++|++++|++++++++||+.. ... .+ .
T Consensus 66 ~~v~vv~is~d~~~~-~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~----~~~------------------~~------~ 116 (164)
T 4gqc_A 66 ANAEVLAISVDSPWC-LKKFKDENRLAFNLLSDYNREVIKLYNVYH----EDL------------------KG------L 116 (164)
T ss_dssp SSSEEEEEESSCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCEE----EEE------------------TT------E
T ss_pred cCceEEEecCCCHHH-HHHHHHhcCcccceeecCchHHHHHcCCcc----ccc------------------cc------C
Confidence 999999999998875 788885 78999999999999999999841 000 00 1
Q ss_pred CCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 341 EGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 341 D~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+...|++||||++| +|+|.|+..++.++++++++|++++++..+.
T Consensus 117 ~~~~~p~tflID~~G-~I~~~~~~~~~~~~~~~~eil~~l~~l~~e~ 162 (164)
T 4gqc_A 117 KMVAKRAVFIVKPDG-TVAYKWVTDNPLNEPDYDEVVREANKIAGEL 162 (164)
T ss_dssp EEEECCEEEEECTTS-BEEEEEECSCTTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCeeeEEEEECCCC-EEEEEEEeCCCCCCCCHHHHHHHHHHHhccc
Confidence 124568999999996 9999999999999999999999999987653
No 2
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.93 E-value=1.1e-25 Score=197.11 Aligned_cols=153 Identities=14% Similarity=0.158 Sum_probs=127.4
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+++|+.||.|.|++. +|++++|+++ +++++||.|++..|||.|+.++.+|++.++++++
T Consensus 3 ~l~vG~~aPdF~l~~~-------------------~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~ 62 (157)
T 4g2e_A 3 MVEIGELAPDFELPDT-------------------ELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ 62 (157)
T ss_dssp CCCTTSBCCCCEEEBT-------------------TSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGG
T ss_pred cCCCCCCCcCeEeECC-------------------CCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccc
Confidence 5789999998877766 5999999996 7789999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKG 340 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~G 340 (399)
.|+.+|+|+.++++. ++.|.+ +.++|++++|++++++++||+.. . . .+ ..|
T Consensus 63 ~~~~~v~vs~d~~~~-~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~----~------~-------------~~----~~~ 114 (157)
T 4g2e_A 63 VNAVVLGISVDPPFS-NKAFKEHNKLNFTILSDYNREVVKKYNVAW----E------F-------------PA----LPG 114 (157)
T ss_dssp CSSEEEEEESSCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCEE----E------C-------------TT----STT
T ss_pred cCceEeeecccchhH-HHHHHHHcCCcEEEEEcCCcHHHHHcCCcc----c------c-------------cc----CCC
Confidence 999999999998875 788885 78999999999999999999852 0 0 01 123
Q ss_pred CCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 341 EGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 341 D~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
.....|++||||++| +|+|.|+..++.+++++++|++++++|
T Consensus 115 ~~~~~p~tflID~~G-~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 115 YVLAKRAVFVIDKEG-KVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp CEEECEEEEEECTTS-BEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cceeeeeEEEECCCC-EEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 345679999999996 999999999999999999999999886
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.88 E-value=4e-22 Score=179.47 Aligned_cols=154 Identities=13% Similarity=0.055 Sum_probs=124.8
Q ss_pred CCCCCCCCCCCccccc-CccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccc
Q 015842 180 QAPPVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKP 257 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~-~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr-~el~~L~e~~p 257 (399)
.+++++|+.||.|.|+ +. +|++++|+++++++++||+||+..|||.|+ .|+..|++.++
T Consensus 12 ~~~~~vG~~aPdf~l~~~~-------------------~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~ 72 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGE-------------------PGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAE 72 (173)
T ss_dssp -CCCCTTCBCCCCEEECSS-------------------TTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHH
T ss_pred CCCCCCCCCCCCeEeeeCC-------------------CCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 4678999999988887 44 499999999889889999999999999999 59999999999
Q ss_pred hhhhcCCeEEE-EecCChhhHHhhhcC-CCCC--ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 258 IFDALGIQLFA-VLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 258 ef~alGV~LVa-IspE~~e~~ik~F~~-~~l~--f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
+|++.|+.+|+ |+.+++.. .+.|.+ ..++ |++++|++.++.++||+.. ..... .. .
T Consensus 73 ~~~~~gv~vv~~iS~D~~~~-~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~------------~~~~~-~~-----~- 132 (173)
T 3mng_A 73 ALKAKGVQVVACLSVNDAFV-TGEWGRAHKAEGKVRLLADPTGAFGKETDLLL------------DDSLV-SI-----F- 132 (173)
T ss_dssp HHHTTTCCEEEEEESSCHHH-HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBC------------CSTTH-HH-----H-
T ss_pred HHHhCCCEEEEEEcCCCHHH-HHHHHHHhCCCCceEEEECCChHHHHHhCCCc------------ccccc-cc-----c-
Confidence 99999999997 99998865 788875 6677 9999999999999999952 00000 00 0
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHH
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEIC 380 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~g--Drad~eeVLaAl 380 (399)
|.....|++|||| +| +|+|.+++.+.. +..+.++||++|
T Consensus 133 ------g~~~~~r~tfvID-dG-~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 133 ------GNRRLKRFSMVVQ-DG-IVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp ------SSCCBCCEEEEEE-TT-EEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred ------CCcceEEEEEEEE-CC-EEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 2234579999999 96 999999999864 456777777653
No 4
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.6e-22 Score=186.40 Aligned_cols=165 Identities=16% Similarity=0.072 Sum_probs=134.8
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
++++|+.||.|.++.. ++.+|++|+|+++ +++++||+||...|||.|..|+.+|++.+++|++
T Consensus 22 ~~~VG~~APdF~l~a~----------------~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~ 84 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAV----------------VDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE 84 (216)
T ss_dssp CCCTTSBCCCCCEEEE----------------ETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcCCCCCCcce----------------ECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc
Confidence 3689999998877643 1234789999996 6789999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC--------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~--------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
+|+.+|+||.+++.. .+.|.+ ..++|++++|+++++.++||+-. +
T Consensus 85 ~g~~vigiS~Ds~~s-h~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~-------------~------------- 137 (216)
T 3sbc_A 85 QGAQVLFASTDSEYS-LLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLI-------------E------------- 137 (216)
T ss_dssp TTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEE-------------T-------------
T ss_pred CCceEEEeecCchhh-HHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCee-------------c-------------
Confidence 999999999999875 677763 14899999999999999999841 1
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh----------ccccccccccc
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ----------RDQSETIKTSQ 398 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~----------~~~~~~~~~~~ 398 (399)
.++...+|+||||++| +|+|..+...... .+++|+|++++++|-.. ++|.++|+.+.
T Consensus 138 ------~~g~~~R~tFiID~~G-~Ir~~~v~~~~~g-rn~dEiLr~l~AlQ~~~~~~~~~Pa~W~~G~~~i~p~~ 204 (216)
T 3sbc_A 138 ------EEGVALRGLFIIDPKG-VIRHITINDLPVG-RNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATIKPTV 204 (216)
T ss_dssp ------TTTEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHHHHHCCBBCTTCCTTSCCBCCST
T ss_pred ------cCCceeeEEEEECCCC-eEEEEEEcCCCCC-CCHHHHHHHHHHhhhHhhcCCCcCCCCCCCCceecCCH
Confidence 1234568999999996 9999998775544 48899999999997222 67778887653
No 5
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.87 E-value=1.8e-21 Score=183.72 Aligned_cols=153 Identities=10% Similarity=0.094 Sum_probs=129.3
Q ss_pred CCCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchH-----HHHHHHH
Q 015842 179 IQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCR-----AEAHQLY 253 (399)
Q Consensus 179 ~~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr-----~el~~L~ 253 (399)
....+++|+.||.|.|++. +|++|+|++ ++++++||+||+..|||+|+ .++..|+
T Consensus 18 ~g~~l~vG~~APdFtL~d~-------------------~G~~vsLsd-~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~ 77 (224)
T 3keb_A 18 IGDFPRKGDYLPSFMLVDD-------------------QKHDAALES-FSHTPKLIVTLLSVDEDEHAGLLLLRETRRFL 77 (224)
T ss_dssp BSCCCCTTCBCCCCEEEET-------------------TSCEEEGGG-GTTCCEEEEECSCTTCSTTTSHHHHHHHHHHH
T ss_pred ecCcCCCCCCCCCeEEECC-------------------CCCEEeHHH-hCCCcEEEEEEeCCCCCCCCCCccHHHHHHHH
Confidence 3456789999998887665 499999999 57889999999999999999 9999999
Q ss_pred hccchhhhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 254 AKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 254 e~~pef~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp-~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
+. + .|+.+|+||.+++.. ++.|.+ ..+ +|++++|+ +..+.++||+.. . .
T Consensus 78 ~~---~--~gv~VvgIS~Ds~~~-~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~-----------~-~---------- 129 (224)
T 3keb_A 78 DS---W--PHLKLIVITVDSPSS-LARARHEHGLPNIALLSTLRGRDFHKRYGVLI-----------T-E---------- 129 (224)
T ss_dssp TT---C--TTSEEEEEESSCHHH-HHHHHHHHCCTTCEEEESTTCTTHHHHTTCBC-----------C-S----------
T ss_pred HH---c--CCCEEEEEECCCHHH-HHHHHHHcCCCCceEEEcCCchHHHHHhCCcc-----------c-c----------
Confidence 88 4 799999999999875 788875 667 69999999 699999999951 0 0
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 331 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 331 ~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
+.+ .++..|++||||++| +|+|.++..++.++++++++|++|+.+.++.
T Consensus 130 -----~~~--~G~~~p~tfvID~dG-~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~ 178 (224)
T 3keb_A 130 -----YPL--SGYTSPAIILADAAN-VVHYSERLANTRDFFDFDAIEKLLQEGEQQA 178 (224)
T ss_dssp -----TTS--TTCBCCEEEEECTTC-BEEEEEECSBTTCCCCHHHHHHHHHHHHHHC
T ss_pred -----ccc--cCCccCEEEEEcCCC-EEEEEEecCCCCCCCCHHHHHHHHHHhhhcc
Confidence 000 124579999999996 9999999999999999999999999997655
No 6
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.87 E-value=9.5e-22 Score=185.19 Aligned_cols=165 Identities=12% Similarity=0.084 Sum_probs=125.9
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
...++|+.||.|.++.. +. +.+|++|+|+++ +++++||+||...|||.|..|+++|++.+++|+
T Consensus 24 ~~~~vG~~APdF~~~a~-l~--------------d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~ 87 (219)
T 3tue_A 24 GNAKINSPAPSFEEVAL-MP--------------NGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFN 87 (219)
T ss_dssp CCCCTTSBCCCCEEEEE-CT--------------TSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHH
T ss_pred cccccCCcCCCCccccc-cc--------------CCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhc
Confidence 34589999998874322 11 225889999996 667999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC--------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~--------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
++|+.||+||.++... .+.|.. ..++|++++|+++++.++||+-. +
T Consensus 88 ~~g~~vigiS~Ds~~s-h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~-------------~------------ 141 (219)
T 3tue_A 88 ELNCEVLACSIDSEYA-HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLE-------------E------------ 141 (219)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-------------T------------
T ss_pred cCCcEEEEeeCCchhh-HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcc-------------c------------
Confidence 9999999999999875 677752 25899999999999999999841 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh----------ccccccccc
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ----------RDQSETIKT 396 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~----------~~~~~~~~~ 396 (399)
..+....|+||||++| +|+|.++......| +++|||++++++|-.. ++|.++|+.
T Consensus 142 -------~~g~~~R~tFiIDp~g-~Ir~~~~~~~~~gr-~~~EvLr~l~aLQ~~~~~~~~~Pa~W~~G~~~i~p 206 (219)
T 3tue_A 142 -------SQGVAYRGLFIIDPHG-MLRQITVNDMPVGR-SVEEVLRLLEAFQFVEKHGEVCPANWKKGDPGMKP 206 (219)
T ss_dssp -------TTTEECEEEEEECTTS-BEEEEEEECTTCCC-CHHHHHHHHHHHHHHHHC-----------------
T ss_pred -------CCCeeEEEEEEECCCC-eEEEEEEecCCCCC-CHHHHHHHHHHhhhHHhcCCCcCCCCCCCCccccC
Confidence 1123457999999996 99999976644333 7799999999997432 667777764
No 7
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.86 E-value=4.5e-21 Score=167.73 Aligned_cols=147 Identities=7% Similarity=0.086 Sum_probs=127.1
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+++|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|++++.+
T Consensus 17 ~~~l~~G~~aP~f~l~~~-------------------~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~- 75 (166)
T 3p7x_A 17 GQQINEGDFAPDFTVLDN-------------------DLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK- 75 (166)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-
T ss_pred cccCCCCCCCCCeEEEcC-------------------CCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-
Confidence 457789999997777665 5999999996 7789999999999999999999999999888
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp-~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++|+ +..++++||+.. . .
T Consensus 76 --~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~---------------- 124 (166)
T 3p7x_A 76 --EEGIVLTISADLPFA-QKRWCASAGLDNVITLSDHRDLSFGENYGVVM-----------E-E---------------- 124 (166)
T ss_dssp --TTSEEEEEESSCHHH-HHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE-----------T-T----------------
T ss_pred --CCCEEEEEECCCHHH-HHHHHHHcCCCceEEccCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999998875 788875 678 89999999 999999999851 0 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
.+...|.+||||++| +|+|.|+..+..+++++++++++++++
T Consensus 125 ----~g~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 125 ----LRLLARAVFVLDADN-KVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp ----TTEECCEEEEECTTC-BEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ----CCceeeEEEEECCCC-eEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 123468999999997 999999999999999999999999764
No 8
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.85 E-value=8.1e-21 Score=165.00 Aligned_cols=155 Identities=12% Similarity=0.054 Sum_probs=127.8
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+++|+.+|.|.|++. +|++++++++..+.|+||.|+|..|||.|+.++..|.+++.++++.
T Consensus 2 l~~G~~~P~f~l~~~-------------------~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~ 62 (161)
T 3drn_A 2 VKVGDKAPLFEGIAD-------------------NGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY 62 (161)
T ss_dssp CCTTSBCCCCEEEET-------------------TSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT
T ss_pred CCCCCcCCCeEeecC-------------------CCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc
Confidence 468899997776655 4999999997443349999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC
Q 015842 263 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE 341 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD 341 (399)
|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+. |.
T Consensus 63 ~v~vv~vs~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~----------------------------------~~ 107 (161)
T 3drn_A 63 DVVVIGVSSDDINS-HKRFKEKYKLPFILVSDPDKKIRELYGAK----------------------------------GF 107 (161)
T ss_dssp CEEEEEEESCCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCC----------------------------------CS
T ss_pred CCEEEEEeCCCHHH-HHHHHHHhCCCceEEECCcHHHHHHcCCC----------------------------------Cc
Confidence 99999999998765 788885 7889999999999999999884 11
Q ss_pred CcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccccc
Q 015842 342 GEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQSET 393 (399)
Q Consensus 342 ~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~~~~~~ 393 (399)
....|.+||||++| +|++.|.+. ......++++++++++++...+.++-+
T Consensus 108 ~~~~P~~~lid~~G-~i~~~~~g~-~~~~~~~~~il~~l~~l~~~~~~~~~~ 157 (161)
T 3drn_A 108 ILPARITFVIDKKG-IIRHIYNSQ-MNPANHVNEALKALKQIKEEEISLEHH 157 (161)
T ss_dssp SSCCCEEEEECTTS-BEEEEEECS-SCTTHHHHHHHHHHHHHHHHHHC----
T ss_pred CcccceEEEECCCC-EEEEEEecC-CCCCcCHHHHHHHHHHhhhhhcchhhc
Confidence 23468999999996 899999885 445567899999999998877766544
No 9
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.85 E-value=3.1e-21 Score=175.28 Aligned_cols=152 Identities=13% Similarity=0.048 Sum_probs=125.1
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCC-CceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT-PPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIF 259 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G-~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~-el~~L~e~~pef 259 (399)
++++|+.+|.|.|+++. .+| ++++|+++++++++||+||+..|||.|+. |+..|++.+++|
T Consensus 25 ~l~vG~~aPdf~l~~~~-----------------~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~ 87 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKT-----------------ADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAI 87 (184)
T ss_dssp CCCTTCBCCCCEEEEEE-----------------TTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHH
T ss_pred cCCCCCCCCCcEeeccc-----------------CCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHH
Confidence 47899999977776651 138 89999998888899999999999999999 899999999999
Q ss_pred hhcCCe-EEEEecCChhhHHhhhcC-CCCC--ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 015842 260 DALGIQ-LFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 335 (399)
Q Consensus 260 ~alGV~-LVaIspE~~e~~ik~F~~-~~l~--f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~ 335 (399)
++.|+. +|+|+.+++.. .+.|.+ ..++ |++++|++.++.++||+... +. ..|+.
T Consensus 88 ~~~gv~~vv~Is~d~~~~-~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~------------~~---------~~g~g 145 (184)
T 3uma_A 88 LARGVDDIAVVAVNDLHV-MGAWATHSGGMGKIHFLSDWNAAFTKAIGMEID------------LS---------AGTLG 145 (184)
T ss_dssp HTTTCCEEEEEESSCHHH-HHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEE------------EG---------GGTCE
T ss_pred HHcCCCEEEEEECCCHHH-HHHHHHHhCCCCceEEEEcCchHHHHHcCCcee------------cc---------ccCCc
Confidence 999999 99999998865 788875 6788 99999999999999999520 10 01110
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CCCHHHHHHHH
Q 015842 336 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WAPLAEVIEIC 380 (399)
Q Consensus 336 gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gD--rad~eeVLaAl 380 (399)
....|++|||+ +| +|+|.|++.+.++ +.+.++||+.|
T Consensus 146 ------~~~~r~tfiId-dG-~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 146 ------IRSKRYSMLVE-DG-VVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp ------EEECCEEEEEE-TT-EEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred ------ccceeEEEEEC-CC-EEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 12458999997 75 9999999997754 88999999864
No 10
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.85 E-value=1.6e-20 Score=163.76 Aligned_cols=148 Identities=9% Similarity=0.033 Sum_probs=125.9
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 13 ~~~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 13 GKQLQVGDKALDFSLTTT-------------------DLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred cCCCCCCCCCCCEEEEcC-------------------CCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 345788999997777655 4999999996 67789999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsD-p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++| ++..++++||+.. . +
T Consensus 73 --~~v~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~---------------- 121 (163)
T 1psq_A 73 --DNTVVLTVSMDLPFA-QKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI-----------N-E---------------- 121 (163)
T ss_dssp --TTEEEEEEESSCHHH-HHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC-----------T-T----------------
T ss_pred --CCcEEEEEECCCHHH-HHHHHHhcCCCCcEEecCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999988764 777875 678 8999999 8999999999851 0 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
.+...|.+||||++| +|++.|.+.+..+++++++|+++++++
T Consensus 122 ----~g~~~p~~~liD~~G-~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 122 ----WHLLARAVFVLDTDN-TIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp ----TCSBCCEEEEECTTC-BEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ----CCceEEEEEEEcCCC-eEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 012468999999997 999999999999999999999998864
No 11
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.85 E-value=4.1e-21 Score=168.23 Aligned_cols=151 Identities=13% Similarity=0.117 Sum_probs=122.4
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccch
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPI 258 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr-~el~~L~e~~pe 258 (399)
.+++|+.+|.|.|+.. +.+| ++++++++++++++||.|++..|||.|+ .++.+|++.+++
T Consensus 3 ~~~~G~~aP~f~l~~~-----------------~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~ 65 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYF-----------------DEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGE 65 (162)
T ss_dssp CCCTTCBCCCCEEEEE-----------------CTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHH
T ss_pred cCCCCCCCCCeEEEee-----------------cCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 3578999997766421 1148 9999999778889999999999999999 899999999999
Q ss_pred hhhcCCe-EEEEecCChhhHHhhhcC-CCC--CceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 259 FDALGIQ-LFAVLHEYIESEVKDFWP-RYW--GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 259 f~alGV~-LVaIspE~~e~~ik~F~~-~~l--~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
+++.|++ +|+|+.++++. ++.|.+ ..+ +|++++|++.+++++||+.. . ..+ .|+
T Consensus 66 ~~~~~v~~vv~Is~d~~~~-~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~----~------~~~-----------~g~ 123 (162)
T 1tp9_A 66 LKSKGVTEILCISVNDPFV-MKAWAKSYPENKHVKFLADGSATYTHALGLEL----D------LQE-----------KGL 123 (162)
T ss_dssp HHHTTCCCEEEEESSCHHH-HHHHHHTCTTCSSEEEEECTTSHHHHHTTCEE----E------ETT-----------TTS
T ss_pred HHHCCCCEEEEEECCCHHH-HHHHHHhcCCCCCeEEEECCCchHHHHcCccc----c------ccc-----------CCC
Confidence 9999999 99999998765 788875 667 89999999999999999851 0 000 011
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCC--CHHHHHHHH
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWA--PLAEVIEIC 380 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDra--d~eeVLaAl 380 (399)
.....|++|||| +| +|+|.|++. .++++ ++++||++|
T Consensus 124 ------~~~~~p~~~vid-~G-~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 124 ------GTRSRRFALLVD-DL-KVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp ------EEEECCEEEEEE-TT-EEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred ------CccceeEEEEEE-CC-EEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 013579999999 86 999999998 88876 899998753
No 12
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.85 E-value=5.9e-21 Score=174.27 Aligned_cols=161 Identities=11% Similarity=0.059 Sum_probs=124.0
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCC----CceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccch
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT----PPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPI 258 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G----~~VsLsdL~~~~pvVLvFyRg~gCP~Cr-~el~~L~e~~pe 258 (399)
++|+++|.|.|++..- + ..+.+-..+| ++|+++++++++++||+||++.|||+|. .|+.++++.+++
T Consensus 2 ~vGd~aPdf~l~~~~~-~-------~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~ 73 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVR-N-------MNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDY 73 (182)
T ss_dssp CTTCBCCCCEEEEEHH-H-------HTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCCCCCCCeEEEcccc-c-------ccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 6799999888876300 0 0000001136 7999999889999999999999999999 999999999999
Q ss_pred h-hhcCCe-EEEEecCChhhHHhhhcC-CCC-CceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 259 F-DALGIQ-LFAVLHEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 259 f-~alGV~-LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
| +++|+. +++||.+++.. ++.|.+ ..+ +|++++|+++++.++||+.. . . +. .|+
T Consensus 74 f~~~~g~~~V~gvS~D~~~~-~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~----~------~-~~----------~G~ 131 (182)
T 1xiy_A 74 FIKENNFDDIYCITNNDIYV-LKSWFKSMDIKKIKYISDGNSSFTDSMNMLV----D------K-SN----------FFM 131 (182)
T ss_dssp HHTTSCCSEEEEEESSCHHH-HHHHHHHTTCCSSEEEECTTSHHHHHTTCEE----E------C-GG----------GTC
T ss_pred HHHhCCCcEEEEEeCCCHHH-HHHHHHHcCCCCceEEEeCchHHHHHhCCce----e------c-cc----------cCC
Confidence 9 999996 99999999875 788885 567 69999999999999999941 0 0 00 111
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--------CCCHHHHHHHHHh
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--------WAPLAEVIEICTQ 382 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gD--------rad~eeVLaAl~~ 382 (399)
| .....++|||| +| +|+|.+++.++++ +.++++||++|++
T Consensus 132 -----g-~~~~R~tfvId-dG-~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 -----G-MRPWRFVAIVE-NN-ILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp -----C-EEECCEEEEEE-TT-EEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred -----C-CceEEEEEEEc-CC-EEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 1 12356899999 85 9999999998765 7899999999875
No 13
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.84 E-value=1.5e-20 Score=162.35 Aligned_cols=152 Identities=14% Similarity=0.085 Sum_probs=124.9
Q ss_pred CCCCCCCCCccc--ccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 182 PPVNEKVAPYSA--IENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 182 a~~~~~~apl~~--L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
.+++|+.+|.|. |++. +|++++++++ +++++||.|+++.|||.|+.++..|+++++++
T Consensus 6 ~l~~G~~~P~f~~~l~~~-------------------~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~ 65 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLS-------------------GGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEF 65 (163)
T ss_dssp CCCCCCCGGGGGCCEECS-------------------TTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcCCCccccccCC-------------------CCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHH
Confidence 367899999777 7665 5999999997 55699999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
++.|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+... . +.
T Consensus 66 ~~~~~~vv~vs~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----------~--------------~~---- 116 (163)
T 3gkn_A 66 DKAGAKILGVSRDSVKS-HDNFCAKQGFAFPLVSDGDEALCRAFDVIKE----------K--------------NM---- 116 (163)
T ss_dssp HHTTCEEEEEESSCHHH-HHHHHHHHCCSSCEEECTTCHHHHHTTCEEE----------E--------------EE----
T ss_pred HHCCCEEEEEeCCCHHH-HHHHHHHhCCCceEEECCcHHHHHHhCCccc----------c--------------cc----
Confidence 99999999999998765 778875 678999999999999999998520 0 00
Q ss_pred CCCC--cccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 339 KGEG--EIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 339 ~GD~--~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
.|.. -..|.+||||++| +|++.|. +......+++|+++++++.+
T Consensus 117 ~~~~~~~~~p~~~lid~~G-~i~~~~~--~~~~~~~~~~il~~l~~l~~ 162 (163)
T 3gkn_A 117 YGKQVLGIERSTFLLSPEG-QVVQAWR--KVKVAGHADAVLAALKAHAK 162 (163)
T ss_dssp TTEEEEEECCEEEEECTTS-CEEEEEC--SCCSTTHHHHHHHHHHHHCC
T ss_pred ccccccCcceEEEEECCCC-eEEEEEc--CCCcccCHHHHHHHHHHHhc
Confidence 0111 1279999999996 8999993 34555678999999998764
No 14
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.84 E-value=5.7e-21 Score=170.16 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=124.3
Q ss_pred CCCCCCC----CCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccc
Q 015842 182 PPVNEKV----APYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKP 257 (399)
Q Consensus 182 a~~~~~~----apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~p 257 (399)
++++|+. +|.|.|++. +|++|+++++ +++++||+|++..|||.|+.++..|+++++
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~-------------------~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~ 79 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLS-------------------GSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLP 79 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEG-------------------GGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCcCCCeeEECC-------------------CCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHH
Confidence 4566776 997777665 4899999996 666899999999999999999999999999
Q ss_pred hhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 258 IFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 258 ef~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
++++.|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+... +. .
T Consensus 80 ~~~~~~~~vv~Vs~D~~~~-~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~------------~~-----------~--- 132 (179)
T 3ixr_A 80 QFEQINATVLGVSRDSVKS-HDSFCAKQGFTFPLVSDSDAILCKAFDVIKE------------KT-----------M--- 132 (179)
T ss_dssp HHHTTTEEEEEEESCCHHH-HHHHHHHHTCCSCEEECTTCHHHHHTTCEEE------------EC-----------C---
T ss_pred HHHHCCCEEEEEcCCCHHH-HHHHHHHcCCceEEEECCchHHHHHcCCccc------------cc-----------c---
Confidence 9999999999999998865 778875 678999999999999999998520 00 0
Q ss_pred ccCCCC--cccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 337 NFKGEG--EIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 337 n~~GD~--~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
.|.. ...|++||||++| +|++.|. +.....++++|+++++++++
T Consensus 133 --~g~~~~~~~p~~~lID~~G-~I~~~~~--~~~~~~~~~~il~~l~~l~~ 178 (179)
T 3ixr_A 133 --YGRQVIGIERSTFLIGPTH-RIVEAWR--QVKVPGHAEEVLNKLKAHAE 178 (179)
T ss_dssp --C--CEEEECCEEEEECTTS-BEEEEEC--SCCSTTHHHHHHHHHHHHHC
T ss_pred --cCcccCCcceEEEEECCCC-EEEEEEc--CCCCCCCHHHHHHHHHHHhc
Confidence 0111 1369999999996 8999993 45667788999999998864
No 15
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.84 E-value=2.4e-20 Score=163.48 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=124.9
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+.+|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 19 ~~l~~g~~~P~f~l~~~-------------------~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~- 77 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTK-------------------DLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM- 77 (171)
T ss_dssp CCCCTTSBCCCEEEEET-------------------TSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-
T ss_pred CcCCCCCcCCceEEECC-------------------CCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-
Confidence 45688999997777654 4999999996 67789999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCC-CceeEec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 337 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsD-p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn 337 (399)
.|+++|+|+.++++. +++|.+ ..+ +|++++| ++..+ ++||+.. . +. .
T Consensus 78 -~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~-----------~-~~-----------~---- 127 (171)
T 2yzh_A 78 -EGVDVTVVSMDLPFA-QKRFCESFNIQNVTVASDFRYRDM-EKYGVLI-----------G-EG-----------A---- 127 (171)
T ss_dssp -TTEEEEEEESSCHHH-HHHHHHHTTCCSSEEEECTTTCGG-GGGTCBB-----------C-SS-----------T----
T ss_pred -CCceEEEEeCCCHHH-HHHHHHHcCCCCeEEeecCccCcH-HHhCCEe-----------c-cc-----------c----
Confidence 799999999988765 778875 677 8999999 89999 9999852 0 00 0
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 338 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 338 ~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
..++..|.+||||++| +|+|.|...+..+++++++|+++++++
T Consensus 128 --~~g~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 128 --LKGILARAVFIIDKEG-KVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp --TTTSBCCEEEEECTTS-BEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred --cCCceeeEEEEEcCCC-eEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 0123479999999996 999999999899999999999999875
No 16
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.83 E-value=3.7e-21 Score=174.42 Aligned_cols=153 Identities=9% Similarity=-0.000 Sum_probs=121.5
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.+.++|+++|.|.|++- ..|++|+|+++++++++||+||++.|||.|+.|+.++++.+++|+
T Consensus 12 ~~~~vGd~aPdf~l~~~------------------g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~ 73 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYED------------------VPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFK 73 (171)
T ss_dssp CCCCTTCBCCCCEEECS------------------STTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHH
T ss_pred CcccCcCCCCCeEEecC------------------CCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH
Confidence 46689999997777521 013899999998999999999999999999999999999999999
Q ss_pred hcCCe-EEEEecCChhhHHhhhcC-CCC--CceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 261 ALGIQ-LFAVLHEYIESEVKDFWP-RYW--GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 261 alGV~-LVaIspE~~e~~ik~F~~-~~l--~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
++|+. |++||++++.. .+.|.+ ..+ +|++++|+++++.++||+.. .... + |.
T Consensus 74 ~~gv~~VigIS~D~~~~-~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~------------~~~~---~------g~-- 129 (171)
T 2xhf_A 74 EEGYHTIACIAVNDPFV-MAAWGKTVDPEHKIRMLADMHGEFTRALGTEL------------DSSK---M------LG-- 129 (171)
T ss_dssp HTTCCEEEEEESSCHHH-HHHHHHHHCTTCCSEEEECTTSHHHHHHTCBC------------CCHH---H------HS--
T ss_pred HCCCCEEEEEeCCCHHH-HHHHHHhcCCCCCeEEEEeCCchHHHHhCCce------------eccc---c------CC--
Confidence 99997 99999999975 788885 556 89999999999999999951 0100 0 10
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHHH
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEICT 381 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~g--Drad~eeVLaAl~ 381 (399)
| .....++|||| +| +|+|.+++++++ .+.++++||++++
T Consensus 130 ---g-~~~~R~tfvId-dG-~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 130 ---N-NRSRRYAMLID-DN-KIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp ---S-CCBCCEEEEEE-TT-EEEEEEETTSCSHHHHHHHHHHC----
T ss_pred ---C-cceEEEEEEEe-CC-EEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 1 12356899999 85 999999999887 5667899988775
No 17
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.83 E-value=2.8e-20 Score=162.77 Aligned_cols=147 Identities=6% Similarity=0.044 Sum_probs=123.1
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+++|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 16 ~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-- 73 (165)
T 1q98_A 16 FPQVGEIVENFILVGN-------------------DLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-- 73 (165)
T ss_dssp CCCTTCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--
T ss_pred cCCCCCCCCCeEEECC-------------------CCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--
Confidence 5678999997777665 4999999996 67789999999999999999999999999888
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCC-CceeEecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp-~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++|+ +..++++||+.. . + ...
T Consensus 74 ~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~---------------~~~ 125 (165)
T 1q98_A 74 SNTIVLCISADLPFA-QARFCGAEGIENAKTVSTFRNHALHSQLGVDI-----------Q-T---------------GPL 125 (165)
T ss_dssp TTEEEEEEESSCHHH-HTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE-----------C-S---------------STT
T ss_pred CCCEEEEEeCCCHHH-HHHHHHHcCCCceEEeeccccchHHHHhCcee-----------c-c---------------ccc
Confidence 799999999988765 788885 678 79999998 899999999851 0 0 000
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 381 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~ 381 (399)
.| ...|.+||||++| +|++.|...+..++++++++|++++
T Consensus 126 ~g--~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 126 AG--LTSRAVIVLDEQN-NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp TT--SBCCEEEEECTTS-BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred CC--ccceeEEEEcCCC-EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 11 3569999999996 9999999988999999999998763
No 18
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.83 E-value=3.1e-20 Score=165.20 Aligned_cols=152 Identities=11% Similarity=0.018 Sum_probs=122.5
Q ss_pred CCCCCCCCCccccc-CccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchh
Q 015842 182 PPVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIF 259 (399)
Q Consensus 182 a~~~~~~apl~~L~-~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~-el~~L~e~~pef 259 (399)
++++|+.+|.|.|+ +. +|++++|+++++++++||+||+..|||.|+. |+..|++.+++|
T Consensus 2 ~l~~G~~aP~f~l~~~~-------------------~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~ 62 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFGAT-------------------PNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAI 62 (167)
T ss_dssp CCCTTCBCCCCEEESSS-------------------TTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHH
T ss_pred CCCCCCcCCCcEeecCC-------------------CCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 35789999988776 44 4999999998788899999999999999999 999999999999
Q ss_pred hhcCC-eEEEEecCChhhHHhhhcC-CCCC--ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 015842 260 DALGI-QLFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 335 (399)
Q Consensus 260 ~alGV-~LVaIspE~~e~~ik~F~~-~~l~--f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~ 335 (399)
++.|+ ++|+|+.++++. ++.|.+ ..++ |++++|++.+++++||+.. ..+. . .
T Consensus 63 ~~~gv~~vv~Is~d~~~~-~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~-----------~~~~----~-----~--- 118 (167)
T 2wfc_A 63 HGKGVDIIACMAVNDSFV-MDAWGKAHGADDKVQMLADPGGAFTKAVDMEL-----------DLSA----V-----L--- 118 (167)
T ss_dssp HHTTCCEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTTSHHHHHTTCEE-----------CCHH----H-----H---
T ss_pred HHCCCCEEEEEeCCCHHH-HHHHHHhcCCCcceEEEECCCCcHHHHcCCcc-----------cccc----c-----c---
Confidence 99999 999999998764 778875 6788 9999999999999999852 1111 0 0
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHHHh
Q 015842 336 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEICTQ 382 (399)
Q Consensus 336 gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~g--Drad~eeVLaAl~~ 382 (399)
|.....|.+||| ++| +|+|.+++.+.. +-...+.+|+.+.-
T Consensus 119 ----g~~~~~p~t~lI-~~G-~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (167)
T 2wfc_A 119 ----GNVRSKRYSLVI-EDG-VVTKVNVEPDGKGLTCSLAPNILSQLGG 161 (167)
T ss_dssp ----SSCEECCEEEEE-ETT-EEEEEEECTTSSSSSTTSHHHHHHHHC-
T ss_pred ----CcccceEEEEEE-eCC-EEEEEEecCCCCcceeccHHHHHHHhcc
Confidence 112356999999 886 999999998764 34556666666543
No 19
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.82 E-value=8.8e-20 Score=166.42 Aligned_cols=149 Identities=9% Similarity=0.046 Sum_probs=126.5
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+++|+.+|.|.|++. +|++++|+++ +++++||.|++..|||.|+.++..|++++.++
T Consensus 49 ~~~l~~G~~aPdf~l~d~-------------------~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~ 108 (200)
T 3zrd_A 49 GKLPQIGDKAKDFTLVAK-------------------DLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL 108 (200)
T ss_dssp SCCCCTTCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS
T ss_pred cccCCCCCCCCCeEEECC-------------------CCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh
Confidence 446789999997777665 5999999996 67789999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp-~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++|+ +..++++||+... .. +
T Consensus 109 --~~v~vv~Is~D~~~~-~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~------------~~-----------~--- 159 (200)
T 3zrd_A 109 --ENTVVLCISSDLPFA-QSRFCGAEGLSNVITLSTLRGADFKQAYGVAIT------------EG-----------P--- 159 (200)
T ss_dssp --TTEEEEEEESSCHHH-HTTCTTTTTCTTEEEEETTSCTHHHHHTTCEEC------------SS-----------T---
T ss_pred --CCCEEEEEECCCHHH-HHHHHHHcCCCCceEEecCchHHHHHHhCceee------------cc-----------c---
Confidence 699999999998875 788885 678 99999999 9999999998520 00 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 381 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~ 381 (399)
. .+...|++||||++| +|+|.++..+..+.++++++|++++
T Consensus 160 -~--~g~~~p~~~lID~~G-~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 160 -L--AGLTARAVVVLDGQD-NVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp -T--TTSBCCEEEEECTTS-BEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred -C--CCccccEEEEECCCC-eEEEEEecCCcccCCCHHHHHHhhC
Confidence 0 112469999999996 9999999999999999999999874
No 20
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.82 E-value=3.8e-20 Score=181.94 Aligned_cols=137 Identities=13% Similarity=0.137 Sum_probs=117.5
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccc
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 295 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~ 295 (399)
+|++|+|+++ +++++||.||+..|||.|+.|+.+|++.. ..|+++|+||.++++. ++.|.+ +.++|++++|++
T Consensus 13 ~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~~----~~~~~v~gis~D~~~~-~~~f~~~~~l~fp~l~D~~ 86 (322)
T 4eo3_A 13 EGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSREN----FEKAQVVGISRDSVEA-LKRFKEKNDLKVTLLSDPE 86 (322)
T ss_dssp TSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHSC----CTTEEEEEEESCCHHH-HHHHHHHHTCCSEEEECTT
T ss_pred CcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHh----hCCCEEEEEeCCCHHH-HHHHHHhhCCceEEEEcCc
Confidence 5999999996 67799999999999999999999997632 2489999999998875 788885 789999999999
Q ss_pred hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHH
Q 015842 296 MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAE 375 (399)
Q Consensus 296 r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~ee 375 (399)
.++.++||+.. .+...|+|||||++| +|++.|+.....+|+ ++
T Consensus 87 ~~v~~~ygv~~----------------------------------~~~~~r~tfiId~~G-~i~~~~~~v~~~~h~--~~ 129 (322)
T 4eo3_A 87 GILHEFFNVLE----------------------------------NGKTVRSTFLIDRWG-FVRKEWRRVKVEGHV--QE 129 (322)
T ss_dssp CHHHHHTTCEE----------------------------------TTEECCEEEEECTTS-BEEEEEESCCSTTHH--HH
T ss_pred hHHHHhcCCCC----------------------------------CCcCccEEEEECCCC-EEEEEEeCCCccccH--HH
Confidence 99999999831 112358999999996 999999999999987 99
Q ss_pred HHHHHHhhhhhhccccccccc
Q 015842 376 VIEICTQLQDQQRDQSETIKT 396 (399)
Q Consensus 376 VLaAl~~l~~~~~~~~~~~~~ 396 (399)
||+++++++.+...-.|.|++
T Consensus 130 ~l~~~~~~~~~~~~~~~~I~~ 150 (322)
T 4eo3_A 130 VKEALDRLIEEDLSLNKHIEW 150 (322)
T ss_dssp HHHHHHHHHHHHTSCCHHHHH
T ss_pred HHHHHhhhchhhhHHHHHHHh
Confidence 999999998777777777764
No 21
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.82 E-value=1.3e-19 Score=162.58 Aligned_cols=149 Identities=9% Similarity=0.002 Sum_probs=122.2
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+|+.+|.|.|++. . +| ++|+++++ +++++||.|++..|||.|+.++..|+++++++++
T Consensus 2 ~~G~~aP~f~l~~~-----~-------------~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~ 62 (186)
T 1n8j_A 2 LINTKIKPFKNQAF-----K-------------NGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQK 62 (186)
T ss_dssp CTTCBCCCCEEEEE-----E-------------TTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCcEeecc-----c-------------CCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH
Confidence 57888997766655 1 27 89999997 6678999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-C----CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~----~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. . .
T Consensus 63 ~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~-----------~-~---------------- 113 (186)
T 1n8j_A 63 LGVDVYSVSTDTHFT-HKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMR-----------E-D---------------- 113 (186)
T ss_dssp TTEEEEEEESSCHHH-HHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEE-----------T-T----------------
T ss_pred CCCEEEEEECCCHHH-HHHHHHHcCcccCCceeEEECCchHHHHHhCCcc-----------C-C----------------
Confidence 999999999988764 777875 5 6899999999999999999841 0 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
.++..|.+||||++| +|++.|......+ .+.++|+++++.++..
T Consensus 114 ----~g~~~p~~~lID~~G-~i~~~~~~~~~~~-~~~~~l~~~l~~l~~~ 157 (186)
T 1n8j_A 114 ----EGLADRATFVVDPQG-IIQAIEVTAEGIG-RDASDLLRKIKAAQYV 157 (186)
T ss_dssp ----TTEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHH
T ss_pred ----CCceeeEEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHHHH
Confidence 013479999999996 8999998764322 3689999999988753
No 22
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.82 E-value=1.4e-19 Score=161.06 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=118.6
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCC-----CceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccc
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT-----PPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKP 257 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G-----~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~e-l~~L~e~~p 257 (399)
..|+.+|.|.|++... . .+| ++++++++++++++||+||+..|||.|+.| +.+|++.++
T Consensus 8 ~~g~~aP~f~l~~~~~---~------------~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~ 72 (171)
T 2pwj_A 8 DILSAASNVSLQKART---W------------DEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNID 72 (171)
T ss_dssp --CCCSSSBCCCSCEE---C------------CCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHH
T ss_pred cccCcCCCeEEecccc---c------------ccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHH
Confidence 4566899777766510 0 024 899999988888899999999999999999 999999999
Q ss_pred hhhhcCCe-EEEEecCChhhHHhhhcC-CC--CCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 258 IFDALGIQ-LFAVLHEYIESEVKDFWP-RY--WGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 258 ef~alGV~-LVaIspE~~e~~ik~F~~-~~--l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
+|++.|+. +|+|+.++++. ++.|.+ +. ++|++++|++.++.++||+.. . . +. .|
T Consensus 73 ~~~~~g~~~vv~Is~d~~~~-~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~----~------~-~~----------~~ 130 (171)
T 2pwj_A 73 KFKAKGVDSVICVAINDPYT-VNAWAEKIQAKDAIEFYGDFDGSFHKSLELTT----D------L-SA----------GL 130 (171)
T ss_dssp HHHHTTCSEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTTCHHHHHHTCEE----E------C-TT----------TT
T ss_pred HHHHCCCCEEEEEeCCCHHH-HHHHHHHhCCCCceEEEECCccHHHHHhCCcc----c------c-cc----------cc
Confidence 99999999 99999988764 777875 55 489999999999999999851 0 0 00 01
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CCCHHHHHHHH
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WAPLAEVIEIC 380 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gD--rad~eeVLaAl 380 (399)
+ | ....+.+|+|+ +| +|+|.|++.++++ +.++++||++|
T Consensus 131 ~-----g-~~~~~~t~~I~-~G-~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 131 L-----G-IRSERWSAYVV-DG-KVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp C-----C-EEECCEEEEEE-TT-EEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred C-----C-cccceeEEEEE-CC-EEEEEEeecCCCCCcccCHHHHHhcC
Confidence 0 0 01346789999 86 9999999999874 67899999874
No 23
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.81 E-value=2.3e-19 Score=168.78 Aligned_cols=154 Identities=14% Similarity=0.057 Sum_probs=125.6
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+.+|+.+|.|.|+++. +.+|++++|+++ +++++||.|+...|||.|+.++..|++++++|+
T Consensus 46 ~~l~vG~~aPdF~l~~~~----------------d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~ 108 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVI----------------NGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFR 108 (240)
T ss_dssp CSCCTTSBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCcEeeeee----------------CCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 356789999977766541 224789999996 677999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcCC--------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWPR--------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~~--------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+.|+++|+|+.++.+. .+.|.+. .++|++++|++..++++||+.. .
T Consensus 109 ~~gv~vv~Is~D~~~~-~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~-----------~-------------- 162 (240)
T 3qpm_A 109 AINTEVVACSVDSQFT-HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYL-----------E-------------- 162 (240)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-----------T--------------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcc-----------c--------------
Confidence 9999999999988764 6667642 6899999999999999999841 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
..+...|++||||++| +|+|.+...... ..+++++|++++.++..
T Consensus 163 -------~~g~~~p~~flID~~G-~I~~~~~~~~~~-~~~~~eil~~l~~lq~~ 207 (240)
T 3qpm_A 163 -------DQGHTLRGLFIIDEKG-VLRQITMNDLPV-GRSVDETLRLVQAFQYT 207 (240)
T ss_dssp -------TTTEECEEEEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHHHHHHH
T ss_pred -------cCCCccceEEEEcCCC-eEEEEEecCCCC-CCCHHHHHHHHHHhhhh
Confidence 0123568999999996 999999876443 44789999999988743
No 24
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.81 E-value=9.5e-20 Score=166.23 Aligned_cols=161 Identities=14% Similarity=0.071 Sum_probs=121.1
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIFD 260 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~-el~~L~e~~pef~ 260 (399)
-.++||..| ++++..+++....+|. ..-++|+|+++++++++||+||++.|||.|+. |+.+|++.+++|+
T Consensus 9 ~~~~~~~~p-----~~~~~~~~~~~~~~~~----~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~ 79 (176)
T 4f82_A 9 MIQVGDALP-----DAQLFEFIDDAREGCT----LGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLR 79 (176)
T ss_dssp CCCTTCBCC-----CCEEEEEECSCCTTCC----SEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred hhhcCCcCC-----ceEEEEeccccccccc----CCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 357889888 6666655531000000 01268999999899999999999999999999 9999999999999
Q ss_pred hcCC-eEEEEecCChhhHHhhhcC-CCCC--ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 261 ALGI-QLFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 261 alGV-~LVaIspE~~e~~ik~F~~-~~l~--f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
++|+ ++|+||++++.. .+.|.+ ..++ |++++|++.++.++||+... . + ..|+
T Consensus 80 ~~g~d~VigIS~D~~~~-~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~----------~-~----------~~G~-- 135 (176)
T 4f82_A 80 AAGIDEIWCVSVNDAFV-MGAWGRDLHTAGKVRMMADGSAAFTHALGLTQD----------L-S----------ARGM-- 135 (176)
T ss_dssp HTTCCEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEE----------C-G----------GGTC--
T ss_pred hCCCCEEEEEeCCCHHH-HHHHHHHhCCCCCceEEEcCchHHHHHhCCCcc----------c-c----------ccCC--
Confidence 9999 999999999875 788885 6787 99999999999999999520 0 0 0011
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCC-CCCCCHHHHHHHHH
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNF-GDWAPLAEVIEICT 381 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~-gDrad~eeVLaAl~ 381 (399)
| ....+++||| ++| +|+|.+++..- .+..+.++||++|+
T Consensus 136 ---g-~~s~R~tfII-~dG-~I~~~~~~~~~~~~~~~a~~vL~~Lk 175 (176)
T 4f82_A 136 ---G-IRSLRYAMVI-DGG-VVKTLAVEAPGKFEVSDAASVLATLT 175 (176)
T ss_dssp ---C-EEECCEEEEE-ETT-EEEEEEECCTTCCSSSSHHHHHHTCC
T ss_pred ---C-cccccEEEEE-cCC-EEEEEEEcCCCCcchhhHHHHHHHhh
Confidence 0 1235899999 886 99999998732 13446677776653
No 25
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.81 E-value=3.5e-19 Score=165.94 Aligned_cols=157 Identities=16% Similarity=0.158 Sum_probs=125.4
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+..|+.+|.|.+++. +| +++++++..++++||+||...|||.|+.++.+|++++++|++
T Consensus 4 ~l~~G~~aP~F~l~~~-------------------~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~ 63 (224)
T 1prx_A 4 GLLLGDVAPNFEANTT-------------------VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK 63 (224)
T ss_dssp -CCTTCBCCCCEEEET-------------------TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcCCCCCcEEecC-------------------CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH
Confidence 4578999997766555 48 899999766668999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-----------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-----------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-----------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
.|+++|+|+.++.+. ++.|.+ ..++|++++|++++++++||+.. +.
T Consensus 64 ~~v~vi~IS~D~~~~-~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~--------- 120 (224)
T 1prx_A 64 RNVKLIALSIDSVED-HLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLD-------------PA--------- 120 (224)
T ss_dssp TTEEEEEEESSCHHH-HHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSC-------------SC---------
T ss_pred CCCEEEEEcCCCHHH-HHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCC-------------cc---------
Confidence 999999999988764 555553 57899999999999999999852 10
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 331 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 331 ~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.. +..|-....|++||||++| +|++.+.......+ +.++|++++++++...
T Consensus 121 --~~--~~~g~~~~~p~~fiID~~G-~I~~~~~~~~~~gr-~~~eil~~i~~l~~~~ 171 (224)
T 1prx_A 121 --EK--DEKGMPVTARVVFVFGPDK-KLKLSILYPATTGR-NFDEILRVVISLQLTA 171 (224)
T ss_dssp --TT--CSSSCCTTCCEEEEECTTS-BEEEEEECCTTBCC-CHHHHHHHHHHHHHHH
T ss_pred --cc--cCCCccccceEEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhc
Confidence 00 0012234579999999996 99999987755444 7899999999987643
No 26
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.80 E-value=3.1e-19 Score=164.08 Aligned_cols=156 Identities=13% Similarity=0.066 Sum_probs=124.3
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.|++.. +.+|++++++++ +++++||.|++..|||.|+.++..|++++++|
T Consensus 16 ~~~~~~G~~aP~f~l~~~~----------------~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~ 78 (211)
T 2pn8_A 16 ENLYFQSMPAPYWEGTAVI----------------DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEF 78 (211)
T ss_dssp ---CCSSCBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHH
T ss_pred cccCCCCCcCCCeEeeccc----------------CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 3466889999977766540 113789999996 67799999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
++.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. . .
T Consensus 79 ~~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-----------~--~---------- 134 (211)
T 2pn8_A 79 RSINTEVVACSVDSQFT-HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYL-----------E--D---------- 134 (211)
T ss_dssp HTTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-----------T--T----------
T ss_pred HHCCCEEEEEECCCHHH-HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcc-----------c--C----------
Confidence 99999999999988764 777775 3 5799999999999999999841 0 0
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+...|.+||||++| +|+|.+++..... .++++++++++.++..+
T Consensus 135 ---------~g~~~p~~~lID~~G-~I~~~~~g~~~~~-~~~~ell~~l~~l~~~~ 179 (211)
T 2pn8_A 135 ---------SGHTLRGLFIIDDKG-ILRQITLNDLPVG-RSVDETLRLVQAFQYTD 179 (211)
T ss_dssp ---------TTEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHHH
T ss_pred ---------CCcccceEEEECCCC-EEEEEEecCCCCC-CCHHHHHHHHHHhhhcc
Confidence 013479999999996 9999998753332 47899999999987543
No 27
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.80 E-value=2.5e-19 Score=170.56 Aligned_cols=154 Identities=14% Similarity=0.072 Sum_probs=126.3
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+.+|+.+|.|.|+++. +.+|++|+|+++ +++++||+|++..|||.|+.++.+|++++++|+
T Consensus 60 ~~l~vG~~aPdF~l~~l~----------------d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~ 122 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVI----------------DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122 (254)
T ss_dssp CCCCTTSBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHH
T ss_pred cccCCCCCCCCcEeeeec----------------CCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 466789999977766541 224889999996 677899999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcCC--------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWPR--------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~~--------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+.|+++|+|+.++.+. .+.|.+. .++|++++|++..++++||+.. +
T Consensus 123 ~~gv~vv~IS~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~-------------~------------ 176 (254)
T 3tjj_A 123 SINTEVVACSVDSQFT-HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYL-------------E------------ 176 (254)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEE-------------T------------
T ss_pred HcCCEEEEEcCCCHHH-HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcc-------------c------------
Confidence 9999999999998764 6777642 6899999999999999999841 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
..+...|++||||++| +|+|.++..... ..+++++|++++.++..
T Consensus 177 -------~~g~~~p~tflID~~G-~I~~~~~~~~~~-~~~~~eil~~L~alq~~ 221 (254)
T 3tjj_A 177 -------DSGHTLRGLFIIDDKG-ILRQITLNDLPV-GRSVDETLRLVQAFQYT 221 (254)
T ss_dssp -------TTTEECEEEEEECTTS-BEEEEEEECTTC-CCCHHHHHHHHHHHHHH
T ss_pred -------cCCCccceEEEECCCC-eEEEEEecCCCC-CCCHHHHHHHHHhhccc
Confidence 0123568999999996 999999986543 34789999999888743
No 28
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.80 E-value=2.9e-19 Score=168.37 Aligned_cols=156 Identities=16% Similarity=0.146 Sum_probs=125.2
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+..|+.+|.|.+++. +| +++|+++..++++||+|++..|||.|+.++.+|++++++|++.
T Consensus 3 l~iG~~aPdF~l~~~-------------------~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~ 62 (233)
T 2v2g_A 3 ITLGEVFPNFEADST-------------------IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR 62 (233)
T ss_dssp CCTTCBCCCCEEEET-------------------TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT
T ss_pred CCCCCCCCCcEEecC-------------------CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc
Confidence 568899997766655 48 8999997665589999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-------C--CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 263 GIQLFAVLHEYIESEVKDFWP-------R--YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~-------~--~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
|+++|+|+.++.+. ++.|.+ . .++|++++|++++++++||+.. +..
T Consensus 63 ~v~vigIS~D~~~~-~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~~----------- 117 (233)
T 2v2g_A 63 GVKLIALSCDNVAD-HKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVD-------------PDE----------- 117 (233)
T ss_dssp TEEEEEEESSCHHH-HHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEE-------------EEE-----------
T ss_pred CCEEEEEcCCCHHH-HHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcC-------------ccc-----------
Confidence 99999999988764 566664 3 6899999999999999999852 000
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
. +..|.....|++||||++| +|++.+.......+ +.++||+++++++...
T Consensus 118 ~--~~~g~~~~~p~~fiID~~G-~I~~~~~~~~~~gr-~~~eilr~l~~Lq~~~ 167 (233)
T 2v2g_A 118 R--TSTGMPLTCRAVFIIGPDK-KLKLSILYPATTGR-NFSEILRVIDSLQLTA 167 (233)
T ss_dssp E--CTTCCEEECEEEEEECTTS-BEEEEEEECTTBCC-CHHHHHHHHHHHHHHH
T ss_pred c--cCCCcccccceEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhc
Confidence 0 0012234579999999996 99999987654444 7899999999987654
No 29
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.80 E-value=6e-19 Score=151.47 Aligned_cols=148 Identities=15% Similarity=0.067 Sum_probs=123.1
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+.+|+.+|.|.|.+. +|++++++++..++++||.|++..|||.|+.++..|.+++.++.+.
T Consensus 9 ~~~G~~~p~f~l~~~-------------------~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~ 69 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQ-------------------NQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND 69 (160)
T ss_dssp CCTTSBCCCCEEECT-------------------TSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS
T ss_pred CCCCCCCCCeEeEcC-------------------CCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC
Confidence 578888997666555 4999999997544489999999999999999999999999999988
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeEecc--chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 263 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ--GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp--~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
|+++|+|+.++++. ++.|.+ ..++|++++|. +..++++||+.. . .
T Consensus 70 ~~~vv~is~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~-----------~-~------------------- 117 (160)
T 1xvw_A 70 DSAALAISVGPPPT-HKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN-----------E-Q------------------- 117 (160)
T ss_dssp SEEEEEEESCCHHH-HHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE-----------T-T-------------------
T ss_pred CcEEEEEeCCCHHH-HHHHHHhcCCCceEEecCCcChHHHHHcCCcc-----------c-c-------------------
Confidence 99999999988764 777775 67899999995 999999999841 0 0
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
.+.+.|.+||||++| +|++.|.+. .....++++++++++.++
T Consensus 118 -~~~p~~~~~lid~~G-~i~~~~~g~-~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 118 -AGIANRGTFVVDRSG-IIRFAEMKQ-PGEVRDQRLWTDALAALT 159 (160)
T ss_dssp -TTEECSEEEEECTTS-BEEEEEECC-TTCCCCHHHHHHHHHHTC
T ss_pred -CCCeeeeEEEECCCC-eEEEEEecC-CCCCCCHHHHHHHHHHhc
Confidence 123345999999996 899999987 677889999999998765
No 30
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.80 E-value=3.6e-19 Score=158.12 Aligned_cols=148 Identities=11% Similarity=0.079 Sum_probs=121.8
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCCC----ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP----PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~----~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
++|+.+|.|.|++. +|+ +++++++ +++++||.|+|..|||.|+.++..|.+++.++
T Consensus 2 ~~G~~~P~f~l~~~-------------------~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 61 (187)
T 1we0_A 2 LIGTEVQPFRAQAF-------------------QSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAEL 61 (187)
T ss_dssp CTTCBCCCCEEEEE-------------------CSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHH
T ss_pred CCCCcCCCeEEecc-------------------CCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHH
Confidence 57888996666555 367 9999997 66899999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-C----CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~----~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
.+.|+++|+|+.+.++. ++.|.+ . .++|++++|++..++++||+.. . .
T Consensus 62 ~~~~v~vv~vs~d~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------~-~-------------- 114 (187)
T 1we0_A 62 KKLGVEVYSVSTDTHFV-HKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLN-----------E-E-------------- 114 (187)
T ss_dssp HHTTEEEEEEESSCHHH-HHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEE-----------T-T--------------
T ss_pred HHcCCEEEEEECCCHHH-HHHHHHHhccccCCCceEEECCchHHHHHhCCCc-----------C-C--------------
Confidence 99999999999988764 777775 3 6899999999999999999851 0 0
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
.+...|.+||||++| +|++.|......+ .+.++|+++++.+...
T Consensus 115 ------~g~~~P~~~lid~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 115 ------TGLADRGTFIIDPDG-VIQAIEINADGIG-RDASTLINKVKAAQYV 158 (187)
T ss_dssp ------TTEECEEEEEECTTS-BEEEEEEECTTSC-CCTTHHHHHHHHHHHH
T ss_pred ------CCceeeEEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHhhh
Confidence 123578999999996 8999998875443 3678899888888653
No 31
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.80 E-value=6e-19 Score=164.07 Aligned_cols=152 Identities=13% Similarity=0.072 Sum_probs=125.0
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
+.+|+.+|.|.|++.. .+| ++++++++++++++||.|+|..|||.|+.++..|++++++++
T Consensus 25 l~~G~~aP~F~l~~~~-----------------~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~ 87 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLN-----------------KNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFE 87 (221)
T ss_dssp -CTTSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCeEEeccc-----------------cCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHH
Confidence 5788999976665541 038 899999986888999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+. . .
T Consensus 88 ~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~------------~------------ 141 (221)
T 2c0d_A 88 NKNVELLGISVDSVYS-HLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-Y------------D------------ 141 (221)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-E------------T------------
T ss_pred HCCCEEEEEeCCCHHH-HHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-c------------c------------
Confidence 9999999999988764 677774 3 578999999999999999883 0 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+...|.+||||++| +|+|.+.... ....+.++|++++++++..+
T Consensus 142 --------~g~~~P~~~lID~~G-~I~~~~~g~~-~~~~~~~ell~~l~~L~~~~ 186 (221)
T 2c0d_A 142 --------NSFALRGLFIIDKNG-CVRHQTVNDL-PIGRNVQEVLRTIDSIIHVD 186 (221)
T ss_dssp --------TTEECEEEEEECTTS-BEEEEEEECT-TCCCCHHHHHHHHHHHHHHH
T ss_pred --------CCCccceEEEECCCC-eEEEEEecCC-CCCCCHHHHHHHHHHHhhhh
Confidence 013478999999996 9999998865 34468999999999987544
No 32
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.79 E-value=1.1e-18 Score=160.74 Aligned_cols=153 Identities=10% Similarity=0.067 Sum_probs=126.1
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 258 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pe 258 (399)
..+.+|+.+|.|.|++.. .+| ++++++++++++++||.|++..|||.|+.++..|++++++
T Consensus 19 ~~l~~G~~aP~f~l~~~~-----------------~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~ 81 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVF-----------------GDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDA 81 (213)
T ss_dssp -CCCBTSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHH
T ss_pred ccccCCCcCCCeEeeccc-----------------cCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 356789999977665541 138 8999999868889999999999999999999999999999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 259 FDALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 259 f~alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
+++.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. +
T Consensus 82 ~~~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-------------~---------- 137 (213)
T 2i81_A 82 FHERNVELLGCSVDSKYT-HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-------------D---------- 137 (213)
T ss_dssp HHHTTEEEEEEESSCHHH-HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------T----------
T ss_pred HHHCCCEEEEEeCCCHHH-HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-------------c----------
Confidence 999999999999998764 777775 3 6899999999999999999841 0
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 331 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 331 ~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
++...|++||||++| +|+|.+.+..... .+.++|+++++.++..
T Consensus 138 ----------~g~~~p~~~lID~~G-~i~~~~~~~~~~~-~~~~ell~~l~~l~~~ 181 (213)
T 2i81_A 138 ----------DSVSLRAFVLIDMNG-IVQHLLVNNLAIG-RSVDEILRIIDAIQHH 181 (213)
T ss_dssp ----------TTEECEEEEEECTTS-BEEEEEEECTTCC-CCHHHHHHHHHHHHHH
T ss_pred ----------cCCcccEEEEECCCC-EEEEEEecCCCCC-CCHHHHHHHHHHHHhh
Confidence 013579999999996 8999998765433 4889999999998743
No 33
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.79 E-value=1.3e-18 Score=150.98 Aligned_cols=149 Identities=10% Similarity=0.087 Sum_probs=125.5
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.|.+. +|++++++++ +++++||.|+..+|||.|+.++..|++++.++
T Consensus 15 ~~~~~~G~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~ 74 (167)
T 2jsy_A 15 GQEVKVGDQAPDFTVLTN-------------------SLEEKSLADM-KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL 74 (167)
T ss_dssp SCCCCTTSCCCCCEEEBT-------------------TCCEEEHHHH-TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH
T ss_pred cCccCCCCcCCceEEECC-------------------CCCEeeHHHh-CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc
Confidence 345788999997766654 4999999997 67799999999888999999999999999988
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsD-p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++| ++..++++||+.. . +
T Consensus 75 --~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~-----------~-~---------------- 123 (167)
T 2jsy_A 75 --GDVNVYTISADLPFA-QARWCGANGIDKVETLSDHRDMSFGEAFGVYI-----------K-E---------------- 123 (167)
T ss_dssp --SSCEEEEEECSSGGG-TSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB-----------T-T----------------
T ss_pred --CCCEEEEEECCCHHH-HHHHHHhcCCCCceEeeCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999988764 677775 667 8999999 9999999999851 0 1
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
.+...|.+||||++| +|++.|.+.+..+++++++++++++++.
T Consensus 124 ----~g~~~p~~~lid~~G-~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 124 ----LRLLARSVFVLDENG-KVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp ----TCSBCCEEEEECTTS-CEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ----CCceeeEEEEEcCCC-cEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 113468999999996 8999999998999999999999998864
No 34
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.79 E-value=6.1e-19 Score=163.45 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=124.3
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCC--ceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccchh
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP--PMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPIF 259 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~--~VsLsdL~~~~pvVLvFyRg~gCP~Cr-~el~~L~e~~pef 259 (399)
+++|+.+|.|.|++. . +|+ +++|+++++++++||.||+..|||.|+ .|+..|+++++++
T Consensus 3 ~~~G~~aP~f~l~~~-----~-------------~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~ 64 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTR-----Q-------------GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVF 64 (241)
T ss_dssp CCTTSBCCCCEEEEE-----E-------------TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHH
T ss_pred ccCCCCCCCeEEEcc-----c-------------CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 568899997776654 1 266 899999778889999999999999999 9999999999999
Q ss_pred hhcCC-eEEEEecCChhhHHhhhcC-CCCC-ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGI-QLFAVLHEYIESEVKDFWP-RYWG-GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV-~LVaIspE~~e~~ik~F~~-~~l~-f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
++.|+ ++|+|+.++++. ++.|.+ ..++ |++++|++.+++++||+... +. ..|+.
T Consensus 65 ~~~~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~------------~~---------~~g~~- 121 (241)
T 1nm3_A 65 KKYGVDDILVVSVNDTFV-MNAWKEDEKSENISFIPDGNGEFTEGMGMLVG------------KE---------DLGFG- 121 (241)
T ss_dssp HHTTCCEEEEEESSCHHH-HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEE------------CT---------TTTCC-
T ss_pred HHCCCCEEEEEEcCCHHH-HHHHHHhcCCCceEEEECCCcHHHHHhCceee------------cc---------cccCc-
Confidence 99999 999999988764 788875 5676 99999999999999998520 00 00110
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCC----CCHHHHHHHHHh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDW----APLAEVIEICTQ 382 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDr----ad~eeVLaAl~~ 382 (399)
....|++||| ++| +|+|.|++.+...+ .+++++|++++.
T Consensus 122 -----~~~~p~t~li-~~G-~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 122 -----KRSWRYSMLV-KNG-VVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp -----EEECCEEEEE-ETT-EEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred -----ccceeEEEEE-ECC-EEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 1246899999 896 99999999887766 789999998875
No 35
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.79 E-value=1e-18 Score=156.15 Aligned_cols=150 Identities=9% Similarity=0.047 Sum_probs=123.1
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
++|+.+|.|.|++.. .+| ++++++++++++++||.|++..|||.|+.++..|.+++.++++
T Consensus 1 ~~G~~aP~f~l~~~~-----------------~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~ 63 (192)
T 2h01_A 1 AFQGQAPSFKAEAVF-----------------GDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE 63 (192)
T ss_dssp CCSSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH
T ss_pred CCCCcCCCcEeEeee-----------------cCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Confidence 367888866665441 138 8999999878889999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. .
T Consensus 64 ~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-------------~------------- 116 (192)
T 2h01_A 64 RNVELLGCSVDSKFT-HLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-------------N------------- 116 (192)
T ss_dssp TTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------T-------------
T ss_pred CCCEEEEEEeCCHHH-HHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-------------c-------------
Confidence 999999999988764 677774 3 6899999999999999999841 0
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
++..+|.+||||++| +|++.+.+..... .+.++++++++.++..
T Consensus 117 -------~g~~~P~~~liD~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~~ 160 (192)
T 2h01_A 117 -------ESVALRAFVLIDKQG-VVQHLLVNNLALG-RSVDEILRLIDALQHH 160 (192)
T ss_dssp -------TTEECCEEEEECTTS-BEEEEEEGGGSSG-GGHHHHHHHHHHHHHH
T ss_pred -------CCceeeEEEEEcCCC-EEEEEEeCCCCCC-CCHHHHHHHHHHHhhh
Confidence 124578999999996 8999998765433 3789999999998743
No 36
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.79 E-value=2.1e-18 Score=152.58 Aligned_cols=150 Identities=11% Similarity=0.081 Sum_probs=121.7
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.|++. +|++++++++ +++++||.|++.+|||.|+.++..|.+++.+
T Consensus 15 ~~~l~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~- 73 (175)
T 1xvq_A 15 GELPAVGSPAPAFTLTGG-------------------DLGVISSDQF-RGKSVLLNIFPSVDTPVCATSVRTFDERAAA- 73 (175)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-
T ss_pred CCCCCcCCcCCCeEEECC-------------------CCCEEeHHHc-CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-
Confidence 346788999997776655 4999999997 7789999999988899999999999998877
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 337 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn 337 (399)
.|+++|+|+.++++. ++.|.+ ..+ +|++++|++..++++||+.. . +. .
T Consensus 74 --~~v~vv~Is~D~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-----------~-~~---------------~ 123 (175)
T 1xvq_A 74 --SGATVLCVSKDLPFA-QKRFCGAEGTENVMPASAFRDSFGEDYGVTI-----------A-DG---------------P 123 (175)
T ss_dssp --TTCEEEEEESSCHHH-HTTCC------CEEEEECTTSSHHHHTTCBB-----------C-SS---------------T
T ss_pred --cCCEEEEEECCCHHH-HHHHHHHcCCCCceEeeCCHHHHHHHhCCcc-----------c-cc---------------c
Confidence 789999999988865 788875 567 89999999999999999852 0 00 0
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 338 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 338 ~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
..+...|.+||||++| +|+|.|......+.++++++|+++++-
T Consensus 124 --~~g~~~p~~~lid~~G-~I~~~~~g~~~~~~~~~~~~l~~l~~~ 166 (175)
T 1xvq_A 124 --MAGLLARAIVVIGADG-NVAYTELVPEIAQEPNYEAALAALGAT 166 (175)
T ss_dssp --TTTSBCSEEEEECTTS-BEEEEEECSBTTCCCCHHHHHHHHHHT
T ss_pred --cCCcccceEEEECCCC-eEEEEEECCCcCCCCCHHHHHHHHHhh
Confidence 1124579999999996 999999988888999999999998853
No 37
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.78 E-value=1.6e-18 Score=160.01 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=125.6
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.|++. . +.+|++++++++ +++++||.|+|..|||+|+.++..|.++++++
T Consensus 24 ~~~l~~G~~aP~f~l~~~-----~-----------~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~ 86 (220)
T 1zye_A 24 DPAPAVTQHAPYFKGTAV-----V-----------SGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEF 86 (220)
T ss_dssp ---CCTTSBCCCCEEEEE-----C-----------SSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCCCcEEEee-----e-----------CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 346788999997776543 1 225899999996 66899999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
++.|+++|+|+.++.+. .+.|.+ . .++|++++|++..++++||+.. +.
T Consensus 87 ~~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~-------------~~---------- 142 (220)
T 1zye_A 87 HDVNCEVVAVSVDSHFS-HLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLL-------------EG---------- 142 (220)
T ss_dssp HHTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------TT----------
T ss_pred HHCCCEEEEEECCCHHH-HHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCee-------------cC----------
Confidence 99999999999988764 667764 2 6899999999999999999851 00
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+..+|.+||||++| +|+|.+.+. .....+.+++++++++++..+
T Consensus 143 ---------~g~~~P~~~liD~~G-~I~~~~~g~-~~~~~~~~ell~~l~~l~~~~ 187 (220)
T 1zye_A 143 ---------PGLALRGLFIIDPNG-VIKHLSVND-LPVGRSVEETLRLVKAFQFVE 187 (220)
T ss_dssp ---------TTEECEEEEEECTTS-BEEEEEEEC-TTCCCCHHHHHHHHHHHHHTT
T ss_pred ---------CCcccceEEEECCCC-EEEEEEecC-CCCCCCHHHHHHHHHHhhhhc
Confidence 124579999999996 899999876 445568999999999987543
No 38
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.78 E-value=1.9e-18 Score=160.55 Aligned_cols=158 Identities=15% Similarity=0.095 Sum_probs=123.3
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+..|+.+|.|.+++.. .+| +++++++..++++||+||...|||.|+.++.+|++++++|++.
T Consensus 3 l~iG~~aP~F~l~~~~-----------------~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~ 64 (220)
T 1xcc_A 3 YHLGATFPNFTAKASG-----------------IDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL 64 (220)
T ss_dssp CCTTCBCCCCEECBTT-----------------CSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT
T ss_pred CCCCCCCCCcEeeccc-----------------CCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 5688999977665541 138 8999997554579999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC--------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 263 GIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~--------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
|+++|+|+.++.+. ++.|.+ ..++|++++|++++++++||+.. +. ..
T Consensus 65 ~v~vi~vS~D~~~~-~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~-----------~~ 119 (220)
T 1xcc_A 65 NCKLIGFSCNSKES-HDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMD-------------EQ-----------EK 119 (220)
T ss_dssp TEEEEEEESSCHHH-HHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEE-------------EE-----------EE
T ss_pred CCEEEEEeCCCHHH-HHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCC-------------cc-----------cc
Confidence 99999999987754 455543 57899999999999999999841 00 00
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
. ..|.....|++||||++| +|++.+.......+ +.++|++++++++...
T Consensus 120 ~--~~g~~~~~p~~flID~~G-~I~~~~~~~~~~g~-~~~ell~~i~~lq~~~ 168 (220)
T 1xcc_A 120 D--ITGLPLTCRCLFFISPEK-KIKATVLYPATTGR-NAHEILRVLKSLQLTY 168 (220)
T ss_dssp C--TTSCEEECEEEEEECTTS-BEEEEEEECTTBCC-CHHHHHHHHHHHHHHH
T ss_pred c--CCCCCcccceEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhh
Confidence 0 012124579999999996 99999987644333 8899999999987554
No 39
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.78 E-value=2e-18 Score=159.31 Aligned_cols=155 Identities=15% Similarity=0.085 Sum_probs=124.9
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+++|+.+|.|.|+++. +.+|++|+++++ +++++||.|++..||+.|+.++..|++++.+++
T Consensus 38 ~~l~~G~~aP~f~l~~~~----------------d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~ 100 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVI----------------NGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFN 100 (222)
T ss_dssp --CCSSEECCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHH
T ss_pred ccccCCCCCCCeEEeccc----------------CCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 357889999976665440 124799999997 778999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+.|+++|+|+.++.+. .+.|.+ . .++|++++|++..++++||+.. . .
T Consensus 101 ~~~v~vv~Is~D~~~~-~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~-----------~-~------------ 155 (222)
T 3ztl_A 101 SRNCQVIACSTDSQYS-HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFD-----------E-E------------ 155 (222)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBC-----------T-T------------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCee-----------c-C------------
Confidence 9999999999988654 556653 2 7899999999999999999841 0 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+...|.+||||++| +|+|.|......+ ..+++++++++.++..+
T Consensus 156 --------~g~~~P~~~lID~~G-~I~~~~~g~~~~~-~~~~~il~~l~~l~~~~ 200 (222)
T 3ztl_A 156 --------DGNAFRGLFIIDPNG-ILRQITINDKPVG-RSVDETLRLLDAFQFVE 200 (222)
T ss_dssp --------TSSBCEEEEEECTTS-EEEEEEEECTTBC-CCHHHHHHHHHHHHHHH
T ss_pred --------CCCccceEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHhhccc
Confidence 123469999999996 9999999875543 35899999999887553
No 40
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.77 E-value=4.4e-18 Score=153.68 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=124.7
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 258 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pe 258 (399)
..+.+|+.+|.|.|++.. .+| ++++++++ +++++||.|++..|||.|+.++..|.+++.+
T Consensus 4 ~~~~~G~~aP~f~l~~~~-----------------~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~ 65 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALM-----------------PNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKE 65 (202)
T ss_dssp CCCCTTSBCCCCEEEEEC-----------------TTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHH
T ss_pred ccccCCCcCCCcEeeeee-----------------cCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHH
Confidence 356789999977766541 025 89999997 6679999999999999999999999999999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 259 FDALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 259 f~alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
+++.|+++|+|+.++.+. ++.|.+ . .++|++++|++..++++||+.. . +
T Consensus 66 ~~~~~v~vi~Is~D~~~~-~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~-----------~-~---------- 122 (202)
T 1uul_A 66 FSDIGCEVLACSMDSEYS-HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLK-----------E-E---------- 122 (202)
T ss_dssp HHTTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEE-----------T-T----------
T ss_pred HHHCCCEEEEEeCCCHHH-HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCcc-----------C-C----------
Confidence 999999999999988764 677764 3 6899999999999999999851 0 0
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 331 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 331 ~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
++...|++||||++| +|++.+.+... ...+.++|+++++.++..
T Consensus 123 ----------~g~~~P~~~lid~~G-~i~~~~~g~~~-~~~~~~ell~~l~~l~~~ 166 (202)
T 1uul_A 123 ----------DGVAYRGLFIIDPKQ-NLRQITVNDLP-VGRDVDEALRLVKAFQFV 166 (202)
T ss_dssp ----------TTEECEEEEEECTTS-BEEEEEEECTT-BCCCHHHHHHHHHHHHHH
T ss_pred ----------CCceeeEEEEECCCC-EEEEEEeCCCC-CCCCHHHHHHHHHHhhhh
Confidence 124579999999996 89999987643 335889999999998743
No 41
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.77 E-value=3.1e-18 Score=153.61 Aligned_cols=158 Identities=14% Similarity=0.097 Sum_probs=125.7
Q ss_pred CCCCCCCCCcccccCcc---ccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhcc
Q 015842 182 PPVNEKVAPYSAIENIS---IQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKK 256 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~---l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~ 256 (399)
.+.+|+.+|.|.|++.. ..+++.. ..+| ++++++++ +++++||.|+|..|||.|+.++..|.+++
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~---------~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~ 72 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAK---------QPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLN 72 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCS---------SGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTH
T ss_pred cCCCCCcCCCcCccccccccccccccc---------ccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHH
Confidence 36789999988877663 1112111 1126 89999997 67799999999999999999999999999
Q ss_pred chhhhcCCeEEEEecCChhhHHhhhcC-C----CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 257 PIFDALGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 257 pef~alGV~LVaIspE~~e~~ik~F~~-~----~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
.++.+.|+++|+|+.+.++. ++.|.+ . .++|++++|++..++++||+.. .
T Consensus 73 ~~~~~~~v~vv~Vs~d~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-------------~----------- 127 (195)
T 2bmx_A 73 DEFEDRDAQILGVSIDSEFA-HFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLN-------------A----------- 127 (195)
T ss_dssp HHHHTTTEEEEEEESSCHHH-HHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBC-------------T-----------
T ss_pred HHHHHCCCEEEEEECCCHHH-HHHHHHHhccccCCceeEEeCCchHHHHHhCCcc-------------c-----------
Confidence 99999999999999988664 777775 4 6899999999999999999841 0
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
++...|.+||||++| +|++.|......+ .++++|+++++.+..
T Consensus 128 ---------~g~~~P~~~lid~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 128 ---------DGVADRVTFIVDPNN-EIQFVSATAGSVG-RNVDEVLRVLDALQS 170 (195)
T ss_dssp ---------TSSBCEEEEEECTTS-BEEEEEEECTTCC-CCHHHHHHHHHHHHC
T ss_pred ---------CCCccceEEEEcCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHhh
Confidence 013468999999996 8999998875433 378999999998864
No 42
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.76 E-value=1.8e-18 Score=149.55 Aligned_cols=145 Identities=13% Similarity=0.143 Sum_probs=115.0
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCC-CEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRES-PAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~-pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.+.+|+.+|.|.|++. +|++++++++..++ ++||.||+..|||.|+.++..|.+.+.+++
T Consensus 6 ~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~ 66 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNE-------------------DNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELK 66 (159)
T ss_dssp CCCTTCBCCSCEEECT-------------------TSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCeEEECC-------------------CCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5678999997777665 49999999987655 577778899999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
+.| ++|+|+.++++. ++.|.+ ..++|++++|++..++++||+.. .| ..
T Consensus 67 ~~~-~vv~is~d~~~~-~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~------------~p-----------------~~ 115 (159)
T 2a4v_A 67 EYA-AVFGLSADSVTS-QKKFQSKQNLPYHLLSDPKREFIGLLGAKK------------TP-----------------LS 115 (159)
T ss_dssp TTC-EEEEEESCCHHH-HHHHHHHHTCSSEEEECTTCHHHHHHTCBS------------SS-----------------SS
T ss_pred hCC-cEEEEeCCCHHH-HHHHHHHhCCCceEEECCccHHHHHhCCcc------------cc-----------------cC
Confidence 999 999999998765 788875 67899999999999999999852 12 01
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
| ..|.+||| ++| +|++.|.+..... +.+++++.+..+
T Consensus 116 g---~~~~~~li-~~G-~i~~~~~g~~~~~--~~~~~~~~l~~~ 152 (159)
T 2a4v_A 116 G---SIRSHFIF-VDG-KLKFKRVKISPEV--SVNDAKKEVLEV 152 (159)
T ss_dssp C---BCCEEEEE-ETT-EEEEEEESCCHHH--HHHHHHHHHHHH
T ss_pred C---ccceEEEE-cCC-EEEEEEccCCccc--cHHHHHHHHHHH
Confidence 1 36799999 996 8999998653332 345555555444
No 43
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.74 E-value=2.3e-17 Score=148.16 Aligned_cols=151 Identities=15% Similarity=0.065 Sum_probs=122.9
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
.+.+|+.+|.|.|++. . +| ++++++++ +++++||.|++..|||.|+.++..|.+++.++
T Consensus 4 ~l~~G~~aP~f~l~~~-----~-------------~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~ 64 (197)
T 1qmv_A 4 NARIGKPAPDFKATAV-----V-------------DGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDF 64 (197)
T ss_dssp TBCTTSBCCCCEEEEE-----E-------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHH
T ss_pred cccCCCCCCCeEeEee-----c-------------CCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 3567889996666554 1 25 89999996 67899999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~-------~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
++.|+++|+|+.+..+. .++|.+ . .++|++++|++..++++||+.. . +
T Consensus 65 ~~~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~-----------~-~----------- 120 (197)
T 1qmv_A 65 RKLGCEVLGVSVDSQFT-HLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLK-----------T-D----------- 120 (197)
T ss_dssp HTTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEE-----------T-T-----------
T ss_pred HHCCCEEEEEECCCHHH-HHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCcc-----------C-C-----------
Confidence 99999999999988754 666664 2 6899999999999999999841 0 1
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
.+...|++||||++| +|++.+.+.... ..++++++++++.++..
T Consensus 121 ---------~~~~~P~~~lid~~G-~i~~~~~g~~~~-~~~~~e~l~~l~~l~~~ 164 (197)
T 1qmv_A 121 ---------EGIAYRGLFIIDGKG-VLRQITVNDLPV-GRSVDEALRLVQAFQYT 164 (197)
T ss_dssp ---------TTEECEEEEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHHHHHHH
T ss_pred ---------CCceeeEEEEECCCC-cEEEEEeCCCCC-CCCHHHHHHHHHhcchh
Confidence 124579999999996 899999876433 45889999999998744
No 44
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.74 E-value=2.2e-17 Score=148.12 Aligned_cols=151 Identities=11% Similarity=0.051 Sum_probs=123.3
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCCC---ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP---PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~---~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
++|+.+|.|.|++.. .+|+ +++++++++++++||.|+|..|||.|+.++..|.+++.++.
T Consensus 2 ~~G~~~P~f~l~~~~-----------------~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~ 64 (198)
T 1zof_A 2 VVTKLAPDFKAPAVL-----------------GNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFH 64 (198)
T ss_dssp CTTSBCCCCEEEEEC-----------------TTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHH
T ss_pred CCCCcCCceEeeccc-----------------CCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 578889966665440 1388 99999986888999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC--------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~--------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+.|+++|+|+.+.++. ++.|.+ ..++|++++|++..++++||+.. . .
T Consensus 65 ~~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------~-~------------ 119 (198)
T 1zof_A 65 EKGFNVIGVSIDSEQV-HFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLF-----------E-E------------ 119 (198)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEE-----------T-T------------
T ss_pred HcCCEEEEEECCCHHH-HHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcc-----------c-C------------
Confidence 9999999999988654 677764 46889999999999999999841 0 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
+...|.+||||++| +|++.+.+. .....+.++|+++++.++..+
T Consensus 120 ---------g~~~P~~~lid~~G-~i~~~~~g~-~~~~~~~~~l~~~l~~l~~~~ 163 (198)
T 1zof_A 120 ---------AIALRGAFLIDKNM-KVRHAVIND-LPLGRNADEMLRMVDALLHFE 163 (198)
T ss_dssp ---------TEECEEEEEEETTT-EEEEEEEES-SSCCCHHHHHHHHHHHHHHHH
T ss_pred ---------CcccceEEEECCCC-EEEEEEecC-CCCCCCHHHHHHHHHHHHHhh
Confidence 13478999999996 899999875 334457899999999987544
No 45
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.73 E-value=3.4e-17 Score=156.19 Aligned_cols=150 Identities=15% Similarity=0.066 Sum_probs=121.0
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceec-hhhc-cCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKA-LELW-RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsL-sdL~-~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
+..|+.+|.|.+++. +| ++++ ++++ +++++||+||...|||.|..++.+|++++++|+
T Consensus 5 ~~iG~~aPdF~l~~~-------------------~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~ 64 (249)
T 3a2v_A 5 PLIGERFPEMEVTTD-------------------HG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQ 64 (249)
T ss_dssp CCTTSBCCCEEEEET-------------------TE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCeEEEcC-------------------CC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHH
Confidence 468899997776654 37 7999 9976 666788999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-------CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-------~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
+.|+++|+|+.++... ...|.+ ..++|++++|+++.++++||+.. +. .
T Consensus 65 ~~gv~VI~VS~Ds~~~-~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~-------------~~----------~- 119 (249)
T 3a2v_A 65 RLGVDLIGLSVDSVFS-HIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLH-------------AE----------S- 119 (249)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCC-------------TT----------C-
T ss_pred hCCcEEEEEECCCHHH-HHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCcc-------------cc----------C-
Confidence 9999999999988754 444442 37899999999999999999841 11 0
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
| ...+|++||||++| +|++.+.+..... .+.++|++++++++..
T Consensus 120 ------g-~~~~p~~fIID~dG-~I~~~~~~~~~~g-r~~~Ellr~I~alq~~ 163 (249)
T 3a2v_A 120 ------A-THTVRGVFIVDARG-VIRTMLYYPMELG-RLVDEILRIVKALKLG 163 (249)
T ss_dssp ------S-SSCCEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHH
T ss_pred ------C-CcccceEEEECCCC-eEEEEEecCCccc-chhHHHHHHHHHHHhc
Confidence 1 12479999999996 8999998765433 3789999999998753
No 46
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.69 E-value=1.4e-16 Score=134.96 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=110.6
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG 263 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alG 263 (399)
.+|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++...+
T Consensus 3 ~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~ 61 (154)
T 3kcm_A 3 LEENPAPDFTLNTL-------------------NGEVVKLSDL-KGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKP 61 (154)
T ss_dssp CTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSS
T ss_pred CCCCCCCCeEEEcC-------------------CCCEEehhhc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCC
Confidence 67888996666555 4999999997 6677777777 8999999999999999999999999
Q ss_pred CeEEEEecCCh-hhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC
Q 015842 264 IQLFAVLHEYI-ESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE 341 (399)
Q Consensus 264 V~LVaIspE~~-e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD 341 (399)
+.+|+|+.+.. ...++.|.. ..++|+++.|++..+++.||+.
T Consensus 62 ~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------------ 105 (154)
T 3kcm_A 62 FRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT------------------------------------ 105 (154)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC------------------------------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC------------------------------------
Confidence 99999998764 334677775 6789999999999999988874
Q ss_pred CcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 342 GEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 342 ~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
..|.+||||++| +|++.+.+....+. +++.+.++++...+
T Consensus 106 --~~P~~~lid~~G-~i~~~~~g~~~~~~---~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 106 --GVPETFVIDRHG-VILKKVVGAMEWDH---PEVIAFLNNELSKA 145 (154)
T ss_dssp --SBCEEEEECTTS-BEEEEEESCCCTTS---HHHHHHHHTC----
T ss_pred --CCCeEEEECCCC-cEEEEEcCCCcccc---HHHHHHHHHHHHHh
Confidence 147899999996 89999988755544 55555665554433
No 47
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.67 E-value=4.5e-16 Score=131.99 Aligned_cols=144 Identities=14% Similarity=0.125 Sum_probs=112.0
Q ss_pred CCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCC
Q 015842 185 NEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGI 264 (399)
Q Consensus 185 ~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV 264 (399)
+|+.+|.+.|.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.+...++...|+
T Consensus 2 ~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v 60 (151)
T 2f9s_A 2 EGSDAPNFVLEDT-------------------NGKRIELSDL-KGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGV 60 (151)
T ss_dssp CCEECCCCEEECT-------------------TCCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTE
T ss_pred CCCcCCcceeEcC-------------------CCCEEEHHHc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCe
Confidence 5777886655554 4999999997 6677777777 89999999999999999999988899
Q ss_pred eEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCc
Q 015842 265 QLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGE 343 (399)
Q Consensus 265 ~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~ 343 (399)
++|+|+.+.....++.|.+ ..++|+++.|++..+++.||+.
T Consensus 61 ~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-------------------------------------- 102 (151)
T 2f9s_A 61 EIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS-------------------------------------- 102 (151)
T ss_dssp EEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC--------------------------------------
T ss_pred EEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC--------------------------------------
Confidence 9999997654444777775 6789999999999999988773
Q ss_pred ccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccccc
Q 015842 344 IKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQSET 393 (399)
Q Consensus 344 qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~~~~~~ 393 (399)
..|.+||||++| +|++.+.+. .+.+++.+.++.+.+.....++.
T Consensus 103 ~~P~~~lid~~G-~i~~~~~G~-----~~~~~l~~~l~~ll~~~~~~~~~ 146 (151)
T 2f9s_A 103 PLPTTFLINPEG-KVVKVVTGT-----MTESMIHDYMNLIKPGETSGLEH 146 (151)
T ss_dssp SSCEEEEECTTS-EEEEEEESC-----CCHHHHHHHHHHHSCC-------
T ss_pred CCCeEEEECCCC-cEEEEEeCC-----CCHHHHHHHHHHHHhhhhccccc
Confidence 147899999996 899988753 46889999999887666555544
No 48
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.67 E-value=5.4e-16 Score=131.02 Aligned_cols=138 Identities=17% Similarity=0.073 Sum_probs=110.2
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+++|+.+|.+.+++ +|++++++++ +++++||.|+ ..|||+|+.++..|.++..++.+.
T Consensus 3 l~~G~~~P~f~l~~--------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~ 60 (152)
T 3gl3_A 3 LDKGDKAPDFALPG--------------------KTGVVKLSDK-TGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAK 60 (152)
T ss_dssp CCTTSBCCCCEEEB--------------------SSSEEEGGGG-TTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCCCcCCceEeeC--------------------CCCeEeHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcC
Confidence 57888999555543 2889999996 6667676666 999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC
Q 015842 263 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE 341 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD 341 (399)
|+++|+|+.+.....++.|.. ..++|+++.|++..+++.||+.
T Consensus 61 ~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------------ 104 (152)
T 3gl3_A 61 GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK------------------------------------ 104 (152)
T ss_dssp TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC------------------------------------
T ss_pred CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC------------------------------------
Confidence 999999998755445677774 7789999999999999988873
Q ss_pred CcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 342 GEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 342 ~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++.+.+.... +.+++.+.++++.
T Consensus 105 --~~P~~~lid~~G-~i~~~~~g~~~~---~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 105 --GMPTSFLIDRNG-KVLLQHVGFRPA---DKEALEQQILAAL 141 (152)
T ss_dssp --SSSEEEEECTTS-BEEEEEESCCTT---THHHHHHHHHHHT
T ss_pred --CCCeEEEECCCC-CEEEEEccCCCc---CHHHHHHHHHHHH
Confidence 147899999996 899999876443 4566666666654
No 49
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.66 E-value=1.4e-15 Score=134.61 Aligned_cols=147 Identities=16% Similarity=0.124 Sum_probs=116.1
Q ss_pred CCCCCCCCCCccccc-CccccccchhhhcccccccccCCCceechhhccCCC-EEEEeecCCCCcchHHHHHHHHhccch
Q 015842 181 APPVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESP-AVLLCIRRPGCIMCRAEAHQLYAKKPI 258 (399)
Q Consensus 181 ~a~~~~~~apl~~L~-~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~p-vVLvFyRg~gCP~Cr~el~~L~e~~pe 258 (399)
..+.+|+.+|.|.|. +. +|++++++++ ++++ +||.| ...|||.|+.++..|.++..+
T Consensus 16 ~~~~~g~~~p~f~l~~~~-------------------~G~~~~l~~~-~gk~~vlv~F-~a~~C~~C~~~~~~l~~l~~~ 74 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVI-------------------DGNVVRLEDV-KSDAATVIMF-ICNHCPFVKHVQHELVRLAND 74 (196)
T ss_dssp CCCCTTCBCCCCEEEETT-------------------TCCEEEHHHH-CCSSEEEEEE-CCSSCHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCcCCceeeeecC-------------------CCCEEeHHHh-CCCCeEEEEE-eCCCCccHHHHHHHHHHHHHH
Confidence 456788999977666 55 4999999997 5554 55554 588999999999999999999
Q ss_pred hhhcCCeEEEEec--------CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHH
Q 015842 259 FDALGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRA 329 (399)
Q Consensus 259 f~alGV~LVaIsp--------E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA 329 (399)
+.+.|+.+|+|+. ++++. ++.|.+ ..++|+++.|++..++++||+.
T Consensus 75 ~~~~~v~vv~v~~d~~~~~~~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------ 129 (196)
T 2ywi_A 75 YMPKGVSFVAINSNDAEQYPEDSPEN-MKKVAEELGYPFPYLYDETQEVAKAYDAA------------------------ 129 (196)
T ss_dssp HGGGTCEEEEEECSCTTTCGGGSHHH-HHHHHHHHTCCSCEEECSSCHHHHHHTCC------------------------
T ss_pred HHhCCcEEEEEECCccccccccCHHH-HHHHHHHcCCCceEEECCchHHHHHhCCC------------------------
Confidence 9999999999997 44543 777775 6789999999999999988873
Q ss_pred HhcCCccccCCCCcccceEEEEecCCCcEEEEEecCC----CCCCCCHHHHHHHHHhhhhhhc
Q 015842 330 RTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERN----FGDWAPLAEVIEICTQLQDQQR 388 (399)
Q Consensus 330 ~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d----~gDrad~eeVLaAl~~l~~~~~ 388 (399)
..|.+||||++| +|+|.+...+ +....+.++|.++++.+.....
T Consensus 130 --------------~~P~~~lid~~G-~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 130 --------------CTPDFYIFDRDL-KCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp --------------EESEEEEEETTC-BEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred --------------CCCeEEEEcCCC-eEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 136899999996 8999877544 3345577899999888765443
No 50
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.66 E-value=6.3e-16 Score=131.78 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=110.9
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+.+|+.+|.|.|.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++.+.
T Consensus 3 l~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~ 61 (152)
T 2lrn_A 3 LATGSVAPAITGIDL-------------------KGNSVSLNDF-KGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDK 61 (152)
T ss_dssp SCTTEECCCCEEECS-------------------SSCEEESGGG-TTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCcCCCceeEcC-------------------CCCEEeHHHc-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccC
Confidence 467888886666554 4999999997 6667777776 899999999999999999999988
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeEecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 263 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 263 GV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp---~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
|+++|+|+.+.....++.|.. ..++|++++|+ ...++++||+.
T Consensus 62 ~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--------------------------------- 108 (152)
T 2lrn_A 62 GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV--------------------------------- 108 (152)
T ss_dssp TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC---------------------------------
T ss_pred CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC---------------------------------
Confidence 999999998754444666664 67899999999 67888877763
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccc
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQS 391 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~~~~ 391 (399)
..|.+||||++| +|++.+. +.+++.+.++.+..+..+++
T Consensus 109 -----~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~l~~~~~~~~ 147 (152)
T 2lrn_A 109 -----GFPHIILVDPEG-KIVAKEL--------RGDDLYNTVEKFVNGAKEGH 147 (152)
T ss_dssp -----SSCEEEEECTTS-EEEEECC--------CTTHHHHHHHHHHTSSSSCC
T ss_pred -----cCCeEEEECCCC-eEEEeeC--------CHHHHHHHHHHHHhhccccc
Confidence 147899999996 8999874 23577777777766655544
No 51
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.3e-15 Score=139.79 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=115.9
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+++|+.+|.|.|++. +|++++++++ +++++||++|-..|||.|+.++..|.+++.++.
T Consensus 30 ~~l~~G~~aP~f~l~~~-------------------~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 89 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDA-------------------GGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYA 89 (218)
T ss_dssp CCCCTTCBCCCCCEECT-------------------TCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHT
T ss_pred CcCCCCCcCCCcEeECC-------------------CCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHH
Confidence 35688999997777665 5999999996 555644444456999999999999999999999
Q ss_pred hcCCeEEEEec--------CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 261 ALGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 261 alGV~LVaIsp--------E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
+.|+++|+|+. ++++. ++.|.+ ..++|++++|++..++++||+..
T Consensus 90 ~~~v~vv~Vs~d~~~~~~~d~~~~-~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~------------------------- 143 (218)
T 3u5r_E 90 GQGLAVVAINSNDAQAFPEETLER-VGAEVKAYGYGFPYLKDASQSVAKAYGAAC------------------------- 143 (218)
T ss_dssp TTTEEEEEEECSCTTTCGGGSHHH-HHHHHHHHTCCSCEEECTTCHHHHHHTCCE-------------------------
T ss_pred hCCcEEEEEECCcccccccCCHHH-HHHHHHHhCCCccEEECCccHHHHHcCCCC-------------------------
Confidence 99999999998 45543 777775 67899999999999999998741
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCC----CCCCCCHHHHHHHHHhhhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERN----FGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d----~gDrad~eeVLaAl~~l~~~~ 387 (399)
.|.+||||++| +|+|...-.+ ....++.++|.++++.+...+
T Consensus 144 -------------~P~~~liD~~G-~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 144 -------------TPDFFLYDRER-RLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp -------------ESEEEEECTTC-BEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred -------------CCeEEEECCCC-cEEEeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 37899999997 8998765432 233456788888888876544
No 52
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.64 E-value=2.4e-15 Score=127.10 Aligned_cols=143 Identities=15% Similarity=0.247 Sum_probs=113.3
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+.+|+.+|.+.+.+. +|+++++.++ +++++||.|+ ..|||.|+.++..|.++..++...
T Consensus 2 ~~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~ 60 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDL-------------------HGKTVSNADL-QGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNK 60 (153)
T ss_dssp --CCTTCCSCEEECT-------------------TSCEEEHHHH-TTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGT
T ss_pred CCCCCCCCCcEeecC-------------------CCCCccHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccC
Confidence 357888886666554 4999999996 6677777776 789999999999999999999988
Q ss_pred CCeEEEEec--CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 263 GIQLFAVLH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 263 GV~LVaIsp--E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
|+.+|+|+. ++.+ .++.|.+ ..++|+++.|++..+.+.||+.
T Consensus 61 ~~~vv~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~---------------------------------- 105 (153)
T 2l5o_A 61 NFQVLAVAQPIDPIE-SVRQYVKDYGLPFTVMYDADKAVGQAFGTQ---------------------------------- 105 (153)
T ss_dssp TEEEEEEECTTSCHH-HHHHHHHHTTCCSEEEECSSCHHHHHHTCC----------------------------------
T ss_pred CeEEEEEecCCCCHH-HHHHHHHHcCCCceEEcCchHHHHHHcCCC----------------------------------
Confidence 999999994 4444 3677775 7789999999999999988873
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccc
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQS 391 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~~~~ 391 (399)
..|.+||||++| +|++.+.+. .+.+++.+.++.+-....+.+
T Consensus 106 ----~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~ll~~~~~~~ 147 (153)
T 2l5o_A 106 ----VYPTSVLIGKKG-EILKTYVGE-----PDFGKLYQEIDTAWRNSDAEG 147 (153)
T ss_dssp ----SSSEEEEECSSS-CCCEEEESS-----CCHHHHHHHHHHHHHCCSSCC
T ss_pred ----ccCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHHhhhhcc
Confidence 147899999996 888887753 678999999988765554433
No 53
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.64 E-value=2.3e-15 Score=126.08 Aligned_cols=133 Identities=9% Similarity=0.094 Sum_probs=104.2
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh---ccchhh
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFD 260 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e---~~pef~ 260 (399)
++|+.+|.|.|++. +|++++++++ +++++||.|+ ..|||.|+.++..|.+ +..++.
T Consensus 2 ~~G~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~ 60 (142)
T 3ewl_A 2 NAGMKAADFTYVTV-------------------HGDNSRMSRL-KAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVE 60 (142)
T ss_dssp CTTSBCCCCEEECT-------------------TCCEEEGGGC-CCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCCCcCCCCEEECC-------------------CCCEEEhhhc-CCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhc
Confidence 57899997777665 4999999996 5566666655 8999999999999888 788898
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHH--HhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFK--ALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 337 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYk--aLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn 337 (399)
+.|+.+|+|+.+.....++.|.+ ..++|+++.|++..+.. .||+.
T Consensus 61 ~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-------------------------------- 108 (142)
T 3ewl_A 61 NGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIR-------------------------------- 108 (142)
T ss_dssp HTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCC--------------------------------
T ss_pred cCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCC--------------------------------
Confidence 89999999998755445777775 77899999999988876 44442
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 338 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 338 ~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++. ..+.+++.+.++.+.
T Consensus 109 ------~~P~~~lid~~G-~i~~~--------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 109 ------ATPTIYLLDGRK-RVILK--------DTSMEQLIDYLATQA 140 (142)
T ss_dssp ------SSSEEEEECTTC-BEEEC--------SCCHHHHHHHHHC--
T ss_pred ------CCCeEEEECCCC-CEEec--------CCCHHHHHHHHHHHc
Confidence 257899999996 88872 367888888887654
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.63 E-value=3.5e-15 Score=129.00 Aligned_cols=158 Identities=9% Similarity=0.055 Sum_probs=117.6
Q ss_pred CCCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccc
Q 015842 179 IQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKP 257 (399)
Q Consensus 179 ~~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cr~el~~L~e~~p 257 (399)
-...+.+|+.+|.|.|++. +|++++++++ +++++||.|+ ..||| .|+.++..|.+++.
T Consensus 3 ~~~~l~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~ 61 (174)
T 1xzo_A 3 QQIKDPLNYEVEPFTFQNQ-------------------DGKNVSLESL-KGEVWLADFI-FTNCETICPPMTAHMTDLQK 61 (174)
T ss_dssp CCCCSCCCEECCCCEEECT-------------------TSCEEETGGG-TTCCEEEEEE-CSCCSSCCCSHHHHHHHHHH
T ss_pred CCCcCccccccCCcEEEcC-------------------CCCEEehhhc-CCCEEEEEEE-cCCCcchhHHHHHHHHHHHH
Confidence 3456788999997766665 4999999995 6677777776 88999 99999999999999
Q ss_pred hhhhcC--CeEEEEecC----ChhhHHhhhcC-CCCCc---eeEeccchHHHHHhCCCcccccccccccccCHHHHHHHH
Q 015842 258 IFDALG--IQLFAVLHE----YIESEVKDFWP-RYWGG---VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYK 327 (399)
Q Consensus 258 ef~alG--V~LVaIspE----~~e~~ik~F~~-~~l~f---~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~ 327 (399)
++.+.| +++|+|+.+ +++ .++.|.+ ..++| ++++|++..+.++|+... +. .+ .
T Consensus 62 ~~~~~~~~~~vv~is~d~~~d~~~-~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~---~~---~~-~--------- 124 (174)
T 1xzo_A 62 KLKAENIDVRIISFSVDPENDKPK-QLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKS---FK---AI-V--------- 124 (174)
T ss_dssp HHHHTTCCCEEEEEESCTTTCCHH-HHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHH---HC---CC-C---------
T ss_pred HhhhcCCcEEEEEEEeCCCCCCHH-HHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhh---cC---ee-E---------
Confidence 999887 999999975 444 3777875 66788 899999999988876521 00 00 0
Q ss_pred HHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 328 RARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 328 rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
....+. ......|.+||||++| +|++.|.+... .+.++|++.++.+.
T Consensus 125 ----~~~~~~--~~~~~~p~~~lid~~G-~i~~~~~g~~~---~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 125 ----KKPEGE--DQVIHQSSFYLVGPDG-KVLKDYNGVEN---TPYDDIISDVKSAS 171 (174)
T ss_dssp ----CCCSSC--CSCCSCCEEEEECTTS-EEEEEEESSSS---CCHHHHHHHHHHHT
T ss_pred ----eecCCC--CeeeeeeEEEEECCCC-eEEEEEcCCCC---CCHHHHHHHHHHHH
Confidence 000000 1123468999999996 89999987643 46889999888764
No 55
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.63 E-value=1.3e-15 Score=127.10 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=110.5
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.+..+|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++.
T Consensus 3 ~~~~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~ 61 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDT-------------------TGTYRYLYDV-QAKYTILFFW-DSQCGHCQQETPKLYDWWLKNR 61 (148)
T ss_dssp CCCCTTSBCCCCCCBCT-------------------TSCBCCGGGC-CCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHG
T ss_pred CccCCCCcCCceEEecC-------------------CCCEEEhHHc-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhc
Confidence 45688999997766665 4899999997 5566666655 8899999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCC-ceeEeccchH--HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYWG-GVVVYDQGME--FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l~-f~VLsDp~r~--lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
+.|+.+|+|+.+.....++.|.+ ..++ |+++.|++.. +.+.||+.
T Consensus 62 ~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~------------------------------- 110 (148)
T 3hcz_A 62 AKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIY------------------------------- 110 (148)
T ss_dssp GGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCC-------------------------------
T ss_pred cCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcC-------------------------------
Confidence 99999999998754445777775 5677 9999999988 88888763
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
..|.+||||++| +|++.+.+. .+++++++.+..+
T Consensus 111 -------~~P~~~lid~~G-~i~~~~~g~-----~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 111 -------ATPVLYVLDKNK-VIIAKRIGY-----ENLDDFLVQYEKS 144 (148)
T ss_dssp -------SSCEEEEECTTC-BEEEESCCG-----GGHHHHHHHHHHH
T ss_pred -------CCCEEEEECCCC-cEEEecCCH-----HHHHHHHHHHHHH
Confidence 147899999996 899887543 6788888777654
No 56
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.62 E-value=5.5e-15 Score=127.20 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=109.6
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
..+...|+.+|.|.|.+. +|++++++++ +++++||.|+- .|||.|+.++..|.+++.++
T Consensus 6 ~~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~ 64 (152)
T 2lrt_A 6 PEDKIKEASIIDIQLKDL-------------------KGNTRSLTDL-KGKVVLIDFTV-YNNAMSAAHNLALRELYNKY 64 (152)
T ss_dssp CCSSSCTTCSCCCCEEBT-------------------TSCEECTTTG-GGSEEEEEEEC-TTCHHHHHHHHHHHHHHHHH
T ss_pred chhhccCCCCCCeEEEcC-------------------CCCEEeHHHh-CCCEEEEEEEc-CCChhhHHHHHHHHHHHHHh
Confidence 345678888996666554 4999999996 67788888885 79999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH---HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME---FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~---lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
.+.|+.+|+|+.+.....++.|.. .++|+++.|++.. +.++||+.
T Consensus 65 ~~~~~~vv~i~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~v~------------------------------- 112 (152)
T 2lrt_A 65 ASQGFEIYQISLDGDEHFWKTSAD-NLPWVCVRDANGAYSSYISLYNVT------------------------------- 112 (152)
T ss_dssp GGGTEEEEEEECSCCHHHHHHHHT-TCSSEEEECSSGGGCHHHHHHTCC-------------------------------
T ss_pred ccCCeEEEEEEccCCHHHHHHHHh-CCCceEEECCCCcchHHHHHcCcc-------------------------------
Confidence 999999999998876655666664 4899999999987 88888763
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 382 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~ 382 (399)
..|.+||||++| +|++.+.+ ..++++.+.++..
T Consensus 113 -------~~P~~~lid~~G-~i~~~~~g-----~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 113 -------NLPSVFLVNRNN-ELSARGEN-----IKDLDEAIKKLLE 145 (152)
T ss_dssp -------SCSEEEEEETTT-EEEEETTT-----CSCHHHHHHHHHG
T ss_pred -------cCceEEEECCCC-eEEEecCC-----HHHHHHHHHHHHh
Confidence 147899999996 89987664 3667777665543
No 57
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.61 E-value=4.9e-15 Score=126.19 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=108.3
Q ss_pred CCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccchhhhcC
Q 015842 185 NEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKPIFDALG 263 (399)
Q Consensus 185 ~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~e-l~~L~e~~pef~alG 263 (399)
+|+.+|.|.|++. ++ +|++++++++ +++++||.|+ ..|||.|+.+ +..|.+++.++...|
T Consensus 2 ~g~~aP~f~l~~~----~~-------------~g~~~~l~~~-~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~ 62 (158)
T 3eyt_A 2 NAMKAPELQIQQW----FN-------------SATDLTLADL-RGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDK 62 (158)
T ss_dssp CCEECCCCCEEEE----ES-------------CSSCCCTGGG-TTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTT
T ss_pred CCCcCCCceehhh----hc-------------CCCccCHHHh-CCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCC
Confidence 5777886666553 11 4899999996 5667776666 6899999997 999999999998889
Q ss_pred CeEEEEec-------CChhhHHhhhcC-CCCCceeEeccch-----HHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 264 IQLFAVLH-------EYIESEVKDFWP-RYWGGVVVYDQGM-----EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 264 V~LVaIsp-------E~~e~~ik~F~~-~~l~f~VLsDp~r-----~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
+.+|+|+. ++.+. ++.|.+ ..++|+++.|++. .+++.||+.
T Consensus 63 v~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~------------------------- 116 (158)
T 3eyt_A 63 VAVLGLHTVFEHHEAMTPIS-LKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR------------------------- 116 (158)
T ss_dssp EEEEEEECCCSCGGGSCHHH-HHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC-------------------------
T ss_pred EEEEEEEecccccccCCHHH-HHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC-------------------------
Confidence 99999994 45554 777775 7889999999998 678877763
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 331 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 331 ~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
..|.+||||++| +|++.+.+. .+.+++.+.++.+-.+
T Consensus 117 -------------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 117 -------------GTPSLLLIDKAG-DLRAHHFGD-----VSELLLGAEIATLLGE 153 (158)
T ss_dssp -------------SSSEEEEECTTS-EEEEEEESC-----CCHHHHHHHHHHHHTS
T ss_pred -------------CCCEEEEECCCC-CEEEEEeCC-----CCHHHHHHHHHHHhcc
Confidence 147899999996 899988864 4677888888877544
No 58
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=8.9e-15 Score=124.36 Aligned_cols=136 Identities=11% Similarity=0.008 Sum_probs=110.6
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceech--hhccCCCEEEEeecCCCCcc--hHHHHHHHHhccc
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKAL--ELWRESPAVLLCIRRPGCIM--CRAEAHQLYAKKP 257 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLs--dL~~~~pvVLvFyRg~gCP~--Cr~el~~L~e~~p 257 (399)
..++|+.+|.|.|++. +|++++++ ++ +++++||.|+. .|||. |+.++..|.+++.
T Consensus 4 ~l~~G~~~p~f~l~~~-------------------~g~~~~l~~~~~-~gk~vll~F~a-~~C~~v~C~~~~~~l~~l~~ 62 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNA-------------------KGEKITRSSDAF-KQKSLLINFWA-SWNDSISQKQSNSELREIYK 62 (150)
T ss_dssp TTSTTSBCCCCCEEBT-------------------TCCEECTTSTTT-TTSEEEEEEEC-TTCCCHHHHHHHHHHHHHHH
T ss_pred cccCCCcCCccEeECC-------------------CCCEEecchhhh-CCCEEEEEEEe-CCCCchHHHHHHHHHHHHHH
Confidence 5678999997776665 49999999 86 66677776665 99999 9999999999999
Q ss_pred hh-hhcCCeEEEEecCChhhHHhhhcC-CCCCceeEecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 258 IF-DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 258 ef-~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp---~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
++ +..|+++|+|+.+.....++.|.+ ..++|+++.|+ +..+++.||+.
T Consensus 63 ~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--------------------------- 115 (150)
T 3fw2_A 63 KYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY--------------------------- 115 (150)
T ss_dssp HHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC---------------------------
T ss_pred HhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC---------------------------
Confidence 99 888999999998866445777775 78899999999 67888888763
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 333 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 333 G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
..|.+||||++| +|++.+. +.+++.+.++.+-.
T Consensus 116 -----------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 116 -----------KIPANILLSSDG-KILAKNL--------RGEELKKKIENIVE 148 (150)
T ss_dssp -----------SSSEEEEECTTS-BEEEESC--------CHHHHHHHHHHHHH
T ss_pred -----------ccCeEEEECCCC-EEEEccC--------CHHHHHHHHHHHHh
Confidence 147899999996 8999884 66777777776643
No 59
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.60 E-value=7.8e-15 Score=126.03 Aligned_cols=138 Identities=15% Similarity=0.067 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.+.+.+. +|+.++++++ +++++||.|+ ..|||.|+.++..|.+...++
T Consensus 12 ~~~~~~G~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~ 70 (158)
T 3hdc_A 12 APLVRTGALAPNFKLPTL-------------------SGENKSLAQY-RGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSF 70 (158)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEESGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHS
T ss_pred CcccCCCCcCCCceeEcC-------------------CCCEEehHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHc
Confidence 345678899996666555 4999999996 6667777777 899999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
.+.++.+|+|+.+.. +++|.. ..++|+++.|++..+++.||+.
T Consensus 71 ~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--------------------------------- 114 (158)
T 3hdc_A 71 PKGDLVVLAVNVEKR---FPEKYRRAPVSFNFLSDATGQVQQRYGAN--------------------------------- 114 (158)
T ss_dssp STTSEEEEEEECSSS---CCGGGGGCCCSCEEEECTTSHHHHHTTCC---------------------------------
T ss_pred ccCCeEEEEEeCCHH---HHHHHHHcCCCceEEECchHHHHHHhCCC---------------------------------
Confidence 888999999998762 456664 6789999999999999988873
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
..|.+||||++| +|++.+.+....+. .++++.+.+.
T Consensus 115 -----~~P~~~lid~~G-~i~~~~~G~~~~~~---~~~~~~~~~~ 150 (158)
T 3hdc_A 115 -----RLPDTFIVDRKG-IIRQRVTGGIEWDA---PKVVSYLKSL 150 (158)
T ss_dssp -----SSSEEEEECTTS-BEEEEEESCCCTTS---HHHHHHHHTT
T ss_pred -----CcceEEEEcCCC-CEEEEEeCCCccch---HHHHHHHHhh
Confidence 147899999996 89999999866554 4555555443
No 60
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.60 E-value=5.3e-15 Score=123.47 Aligned_cols=135 Identities=13% Similarity=-0.007 Sum_probs=109.2
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceech--hhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKAL--ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLs--dL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+|+.+|.+.+.+. +|++++++ ++ +++++||.|+ ..|||.|+.++..|.++..++
T Consensus 4 ~~~~g~~~p~~~l~~~-------------------~g~~~~l~~~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~ 62 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNE-------------------KGEKLSRSAERF-RNRYLLLNFW-ASWCDPQPEANAELKRLNKEY 62 (148)
T ss_dssp -CCTTSBCCCCCEEBT-------------------TSCEECTTSTTT-TTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHT
T ss_pred cccCCCcCCCeEeeCC-------------------CCCEEecccccc-CCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHh
Confidence 5678999996666554 49999999 86 6667777777 899999999999999999999
Q ss_pred -hhcCCeEEEEecCChhhHHhhhcC-CCCCceeEecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 260 -DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 260 -~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp---~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
...|+.+|+|+.+.....++.|.. ..++|+++.|+ +..+.+.||+.
T Consensus 63 ~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 113 (148)
T 3fkf_A 63 KKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAIL----------------------------- 113 (148)
T ss_dssp TTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------
T ss_pred cCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------
Confidence 888999999998765545777774 77899999999 67888888763
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++.+. +.+++.+.++.+-
T Consensus 114 ---------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~ll 145 (148)
T 3fkf_A 114 ---------TLPTNILLSPTG-KILARDI--------QGEALTGKLKELL 145 (148)
T ss_dssp ---------SSSEEEEECTTS-BEEEESC--------CHHHHHHHHHHHC
T ss_pred ---------CcCEEEEECCCC-eEEEecC--------CHHHHHHHHHHHH
Confidence 147899999996 8998876 6788888777764
No 61
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.60 E-value=6.1e-15 Score=122.38 Aligned_cols=137 Identities=17% Similarity=0.118 Sum_probs=104.3
Q ss_pred CcCCCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhcc
Q 015842 177 GCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKK 256 (399)
Q Consensus 177 g~~~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~ 256 (399)
|....++.+|+.+|.+.+.+. +|+.+++++ +++++||.|+ ..|||.|+.++..|.+..
T Consensus 3 ~~~~~~~~~g~~~p~~~l~~~-------------------~g~~~~l~~--~gk~~ll~f~-~~~C~~C~~~~~~l~~~~ 60 (145)
T 3erw_A 3 GAAQAEEKQPAVPAVFLMKTI-------------------EGEDISIPN--KGQKTILHFW-TSWCPPCKKELPQFQSFY 60 (145)
T ss_dssp ---------CCSCCEEEEECT-------------------TSCEEEESC--TTSEEEEEEE-CSSCHHHHHHHHHHHHHH
T ss_pred CcccccccCCCcCCCceeecC-------------------CCCEEeHHH--CCCEEEEEEE-CCCCHHHHHHHHHHHHHH
Confidence 334556788999997776665 489999999 7778888888 999999999999999999
Q ss_pred chhhhcCCeEEEEecC----ChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 257 PIFDALGIQLFAVLHE----YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 257 pef~alGV~LVaIspE----~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
.++...++.+|+|+.+ +.+ .++.|.+ +.++|+++.|++..+++.||+.
T Consensus 61 ~~~~~~~~~~v~v~~d~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-------------------------- 113 (145)
T 3erw_A 61 DAHPSDSVKLVTVNLVNSEQNQQ-VVEDFIKANKLTFPIVLDSKGELMKEYHII-------------------------- 113 (145)
T ss_dssp HHCCCSSEEEEEEECGGGSSCHH-HHHHHHHHTTCCSCEEECSSSHHHHHTTCC--------------------------
T ss_pred HHcCCCCEEEEEEEccCCcCCHH-HHHHHHHHcCCceeEEEcCchhHHHhcCcC--------------------------
Confidence 8888789999999874 343 4777775 7889999999999999988873
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHH
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEIC 380 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl 380 (399)
..|.+||||++| +|++.+.+. .+.+++.+.+
T Consensus 114 ------------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 114 ------------TIPTSFLLNEKG-EIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp ------------EESEEEEECTTC-CEEEEEESC-----CCHHHHHHHH
T ss_pred ------------ccCeEEEEcCCC-cEEEEEcCC-----cCHHHHHHhh
Confidence 147899999996 899888764 4556665544
No 62
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.60 E-value=1.2e-14 Score=124.07 Aligned_cols=148 Identities=13% Similarity=0.137 Sum_probs=112.2
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.+..+|+.+|.+.+.+. +|+++++.++ +++++||.|+ ..|||+|+.++..|.+...++.
T Consensus 6 ~~~~~g~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~ 64 (165)
T 3or5_A 6 QADARPTPAPSFSGVTV-------------------DGKPFSSASL-KGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWA 64 (165)
T ss_dssp -CCCCCCBCCCCEEECT-------------------TSCEEEGGGG-TTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHT
T ss_pred hhhcCCCCCCCceeeCC-------------------CCCEechhHc-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhc
Confidence 45688889996666555 4999999996 6677777777 9999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
..|+.+|+|..+.....++.|.+ ..++|+++.|.+ .+.+.|+... .
T Consensus 65 ~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~--------------------- 111 (165)
T 3or5_A 65 SRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATP-ELIRAFNGYI-----------D--------------------- 111 (165)
T ss_dssp TTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCH-HHHHHHHTTS-----------T---------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCH-HHHHHHhhhh-----------c---------------------
Confidence 99999999997764444677764 678999999987 7777765420 0
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhc
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQR 388 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~ 388 (399)
......|.+||||++| +|++.+.+. .+.+++.+.++.+-.+..
T Consensus 112 ~~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 112 GGITGIPTSFVIDASG-NVSGVIVGP-----RSKADFDRIVKMALGAKA 154 (165)
T ss_dssp TCSCSSSEEEEECTTS-BEEEEECSC-----CCHHHHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHhhhc
Confidence 0112368999999996 899888764 367888888887754443
No 63
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.59 E-value=7.4e-15 Score=129.13 Aligned_cols=145 Identities=13% Similarity=0.059 Sum_probs=110.9
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
...+|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.+++.++..
T Consensus 33 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDA-------------------DGKPKKLSDF-RGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSG 91 (186)
T ss_dssp ECCSCCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCB
T ss_pred cccCCCcCCCcEeEcC-------------------CCCEeeHHHc-CCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhcc
Confidence 3467888886666554 4999999996 6667777776 89999999999999999999988
Q ss_pred cCCeEEEEecCCh-hhHHhhhcC-CCC-CceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 262 LGIQLFAVLHEYI-ESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 262 lGV~LVaIspE~~-e~~ik~F~~-~~l-~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
.|+++|+|+.+.. ...++.|.+ ..+ .|+++.|++..++++||+..
T Consensus 92 ~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------------------------- 139 (186)
T 1jfu_A 92 PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG-------------------------------- 139 (186)
T ss_dssp TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT--------------------------------
T ss_pred CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc--------------------------------
Confidence 8999999997653 123566764 555 58999999999999887731
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
+....|.+||||++| +|++.|.+... .+.+++++.++.+..
T Consensus 140 --~~~~~P~~~lid~~G-~i~~~~~g~~~---~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 140 --RALGMPTSVLVDPQG-CEIATIAGPAE---WASEDALKLIRAATG 180 (186)
T ss_dssp --CCSSSSEEEEECTTS-BEEEEEESCCC---TTSHHHHHHHHHHHC
T ss_pred --ccCCCCEEEEECCCC-CEEEEEecCCc---cCHHHHHHHHHHHhc
Confidence 011258999999996 89999987532 235777777777653
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.59 E-value=2.4e-14 Score=126.54 Aligned_cols=138 Identities=13% Similarity=0.102 Sum_probs=106.4
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 258 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pe 258 (399)
.++.+|+.+|.|.|++. +| +++++.++ +++++||.|+ ..|||+|+.++..|.+++.+
T Consensus 28 ~~~~~G~~~P~f~l~~~-------------------~g~~~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~ 86 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSV-------------------QDPARRLTEADL-KGKPALVNVW-GTWCPSCRVEHPELTRLAEQ 86 (176)
T ss_dssp TTTTTTSBCCCCEEEBS-------------------SCTTSEEEGGGG-CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT
T ss_pred cccccCCcCCCcEeccc-------------------CCCCceecHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC
Confidence 35678999997777665 25 88999996 5678887777 88999999999999887654
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-CCCCce-eEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 259 FDALGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 259 f~alGV~LVaIspE~~e~~ik~F~~-~~l~f~-VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
|+.+|+|+.+.....++.|.+ ..++|+ ++.|++..+.++||+.
T Consensus 87 ----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------- 131 (176)
T 3kh7_A 87 ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY------------------------------- 131 (176)
T ss_dssp ----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC-------------------------------
T ss_pred ----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC-------------------------------
Confidence 899999995433334777775 678888 6999999999998873
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
..|.+||||++| +|++.+.+. .+.+++.+.+..+-.+.
T Consensus 132 -------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 132 -------GAPETYLIDKQG-IIRHKIVGV-----VDQKVWREQLAPLYQQL 169 (176)
T ss_dssp -------SSCEEEEECTTC-BEEEEEESC-----CCHHHHHHHTHHHHHHH
T ss_pred -------CCCeEEEECCCC-eEEEEEcCC-----CCHHHHHHHHHHHHHHH
Confidence 147899999996 899988765 35677776666654443
No 65
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.57 E-value=1.2e-14 Score=123.28 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=110.2
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
++.+|+.+|.+.+.+. +|+.+++.++ + +++||.|+ ..|||.|+.++..|.++..++
T Consensus 4 ~l~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~-- 59 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDP-------------------KGQPVTPATV-S-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET-- 59 (154)
T ss_dssp CCCSBEECCCCCEECT-------------------TSCEECTTTS-C-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCcCCceEEECC-------------------CCCEechHHc-C-CeEEEEEE-cccChhHHHHHHHHHHHHHHc--
Confidence 6788899996666555 4999999996 5 88888888 889999999999999998888
Q ss_pred cCCeEEEEec---CChhhHHhhhcC-CCCCceeEec---cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 262 LGIQLFAVLH---EYIESEVKDFWP-RYWGGVVVYD---QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 262 lGV~LVaIsp---E~~e~~ik~F~~-~~l~f~VLsD---p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
++++|+|+. ++.+ .++.|.+ ..++|+++.| ....+++.||+.
T Consensus 60 -~v~~v~v~~d~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 108 (154)
T 3ia1_A 60 -GVPFYVISREPRDTRE-VVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL----------------------------- 108 (154)
T ss_dssp -CCCEEEEECCTTCCHH-HHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------
T ss_pred -CCeEEEEeCCCcccHH-HHHHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------
Confidence 899999998 5554 4777775 6789999998 667777766652
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhccc
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQ 390 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~~~~ 390 (399)
..|.+||||++| +|++.+.+. .+.+++.+.++++..++..+
T Consensus 109 ---------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~~~~~~~~ 149 (154)
T 3ia1_A 109 ---------GQPWTFVVDREG-KVVALFAGR-----AGREALLDALLLAGADLEGH 149 (154)
T ss_dssp ---------SSCEEEEECTTS-EEEEEEESB-----CCHHHHHHHHHHTTCCC---
T ss_pred ---------cccEEEEECCCC-CEEEEEcCC-----CCHHHHHHHHHhccCccccc
Confidence 247899999996 899988753 56889999998876555443
No 66
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.57 E-value=2.2e-14 Score=126.09 Aligned_cols=144 Identities=15% Similarity=0.215 Sum_probs=111.3
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
++..|+.+|.|.|++.. .+|++++++++ +++++||.|+ ..|||.|+.++..|.+++.++.+
T Consensus 30 ~~~~g~~~p~f~l~~~~-----------------~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~ 90 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLM-----------------EEGTQINLSDF-ENQVVILNAW-GQWCAPCRSESDDLQIIHEELQA 90 (183)
T ss_dssp CGGGCCCCCCCEEEBSS-----------------STTCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCceeccccc-----------------cCCcEecHHHh-CCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHh
Confidence 45677888866555541 14999999996 6667777666 79999999999999999999999
Q ss_pred cCC------eEEEEecCC-hhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 015842 262 LGI------QLFAVLHEY-IESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 333 (399)
Q Consensus 262 lGV------~LVaIspE~-~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G 333 (399)
.|+ ++|+|+.+. ....++.|.+ ..++|+++.|++..+.++||.-.
T Consensus 91 ~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------------------------- 143 (183)
T 3lwa_A 91 AGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVP--------------------------- 143 (183)
T ss_dssp CC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCC---------------------------
T ss_pred cCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCC---------------------------
Confidence 999 999999877 2334777775 78899999999988877665310
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 334 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 334 ~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
....|.+||||++| +|++.|... .+.+++.+.++.+..
T Consensus 144 --------v~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 144 --------ASVIPTTIVLDKQH-RPAAVFLRE-----VTSKDVLDVALPLVD 181 (183)
T ss_dssp --------TTCCSEEEEECTTS-CEEEEECSC-----CCHHHHHHHHHHHHH
T ss_pred --------CCCCCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHh
Confidence 01258899999996 899988754 478899888888754
No 67
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.57 E-value=1.3e-14 Score=128.02 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=110.7
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+.+|+.+|.|.|.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++.
T Consensus 5 ~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~ 63 (188)
T 2cvb_A 5 PELPLESPLIDAELPDP-------------------RGGRYRLSQF-HEPLLAVVFM-CNHCPYVKGSIGELVALAERYR 63 (188)
T ss_dssp CCCCTTCBCCCCEEECT-------------------TSCEEEGGGC-CSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTT
T ss_pred CcCCCCCCCCCceeecC-------------------CCCEEeHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhh
Confidence 35678888997666655 4999999996 6677787777 7899999999999999999998
Q ss_pred hcCCeEEEEec--------CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 261 ALGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 261 alGV~LVaIsp--------E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
.. +++|+|+. ++.+ .++.|.+ ..++|+++.|++..+++.||+.
T Consensus 64 ~~-~~~v~v~~d~~~~~~~d~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-------------------------- 115 (188)
T 2cvb_A 64 GK-VAFVGINANDYEKYPEDAPE-KMAAFAEEHGIFFPYLLDETQEVAKAYRAL-------------------------- 115 (188)
T ss_dssp TT-EEEEEEECCCTTTCGGGSHH-HHHHHHHHHTCCSCEEECSSSHHHHHTTCC--------------------------
T ss_pred cC-eEEEEEEcCccccccccCHH-HHHHHHHHhCCCceEEECCcchHHHHcCCC--------------------------
Confidence 87 99999997 4444 3777775 6789999999999999988874
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCC---CCCCCHHHHHHHHHhhhhhh
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNF---GDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~---gDrad~eeVLaAl~~l~~~~ 387 (399)
..|.+||||++| +|++.....++ ....+.++|.++++.+....
T Consensus 116 ------------~~P~~~lid~~G-~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 116 ------------RTPEVFLFDERR-LLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp ------------EESEEEEECTTC-BEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred ------------CCCeEEEECCCC-cEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 136899999997 89887332221 11235577777777775544
No 68
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.56 E-value=2.4e-14 Score=120.64 Aligned_cols=132 Identities=12% Similarity=0.041 Sum_probs=101.6
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh---ccch
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA---KKPI 258 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e---~~pe 258 (399)
...+|+.+|.|.+++. +|++++++++ +++++||.|+ ..|||.|+.++..|.+ ++.+
T Consensus 4 ~~~~G~~ap~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~ 62 (142)
T 3eur_A 4 KNRLGTKALNFTYTLD-------------------SGVKGTLYQF-PAEYTLLFIN-NPGCHACAEMIEGLKASPVINGF 62 (142)
T ss_dssp TTCTTSBCCCCEEEET-------------------TSCEEETTTC-CCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHH
T ss_pred hhcCCCccCCcEEEcC-------------------CCCEeeHHHc-CCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHH
Confidence 4578999997766654 4999999996 5567777766 9999999999999999 8999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchH--HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 015842 259 FDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGME--FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 335 (399)
Q Consensus 259 f~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~--lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~ 335 (399)
+++.|+.+|+|+.+......+.|.+ ..++|+.+.|++.. +.+.||+
T Consensus 63 ~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v------------------------------- 111 (142)
T 3eur_A 63 TAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDL------------------------------- 111 (142)
T ss_dssp HHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCC-------------------------------
T ss_pred hccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCC-------------------------------
Confidence 9999999999999876555677664 56788999998865 3333322
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 015842 336 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 381 (399)
Q Consensus 336 gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~ 381 (399)
...|.+||||++| +|++.+.. .++|.+.++
T Consensus 112 -------~~~P~~~lid~~G-~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 112 -------RAIPTLYLLDKNK-TVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp -------TTCSEEEEECTTC-BEEEEEEC--------HHHHHHHHH
T ss_pred -------CcCCeEEEECCCC-cEEecCCC--------HHHHHHHHh
Confidence 1258999999996 89998763 456555543
No 69
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.55 E-value=3.5e-14 Score=120.85 Aligned_cols=122 Identities=15% Similarity=0.034 Sum_probs=98.9
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccchhhhcCCeEEEEec-------CChhhHHhhhcC-CCCC
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKPIFDALGIQLFAVLH-------EYIESEVKDFWP-RYWG 287 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~e-l~~L~e~~pef~alGV~LVaIsp-------E~~e~~ik~F~~-~~l~ 287 (399)
+|++++++++ +++++||.|+. .|||.|+.+ +..|.+++.++...|+.+|+|+. ++.+. ++.|.+ ..++
T Consensus 19 ~g~~~~l~~~-~gk~vlv~F~a-~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 95 (160)
T 3lor_A 19 NHEGLSNEDL-RGKVVVVEVFQ-MLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEA-LKVFIDEFGIK 95 (160)
T ss_dssp SSCCCCHHHH-TTSEEEEEEEC-TTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHH-HHHHHHHTTCC
T ss_pred CCCccCHHHh-CCCEEEEEEEc-CCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHH-HHHHHHHcCCC
Confidence 4899999996 56677766665 599999996 99999999999988999999995 45543 777775 7789
Q ss_pred ceeEeccchH------HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEE
Q 015842 288 GVVVYDQGME------FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQ 361 (399)
Q Consensus 288 f~VLsDp~r~------lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~ya 361 (399)
|+++.|++.. ++++||+. ..|.+||||++| +|++.
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~ 136 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLE--------------------------------------GTPSIILADRKG-RIRQV 136 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCC--------------------------------------SSSEEEEECTTS-BEEEE
T ss_pred CcEEECCccccchhhhHHHhcccC--------------------------------------ccceEEEECCCC-cEEEE
Confidence 9999999988 88888763 147899999996 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhh
Q 015842 362 FIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 362 h~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
|.+. .+.+++.+.++.+-.
T Consensus 137 ~~g~-----~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 137 QFGQ-----VDDFVLGLLLGSLLS 155 (160)
T ss_dssp EESC-----CCHHHHHHHHHHHHT
T ss_pred ecCc-----CCHHHHHHHHHHHHh
Confidence 8864 457788888877653
No 70
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=125.97 Aligned_cols=155 Identities=9% Similarity=0.018 Sum_probs=104.4
Q ss_pred ccCcCCCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 015842 175 VCGCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 175 a~g~~~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e 254 (399)
+|+....++++|+.+|.|.|++. +|++++++++ +++++|| +|-..|||.|+.++..|.+
T Consensus 13 ~~~~~~~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll-~F~atwC~~C~~~~~~l~~ 71 (183)
T 2obi_A 13 ACCASRDDWRCARSMHEFSAKDI-------------------DGHMVNLDKY-RGFVCIV-TNVASQCGKTEVNYTQLVD 71 (183)
T ss_dssp ------CCGGGCCSGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEE-EEECSSSTTHHHHHHHHHH
T ss_pred hhhhcccCCcccCcccceEEEcC-------------------CCCEeeHHHc-CCCEEEE-EEeCCCCCCcHHHHHHHHH
Confidence 45556677889999997776665 4999999996 5555554 5557899999999999999
Q ss_pred ccchhhhcCCeEEEEecC--------ChhhHHhhhcC-CCCCceeEe--ccchH----HHHHhCCCcccccccccccccC
Q 015842 255 KKPIFDALGIQLFAVLHE--------YIESEVKDFWP-RYWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLN 319 (399)
Q Consensus 255 ~~pef~alGV~LVaIspE--------~~e~~ik~F~~-~~l~f~VLs--Dp~r~----lYkaLGl~r~~r~s~lsgfl~~ 319 (399)
++.++.+.|+++|+|+.+ +++. ++.|.+ ..++|+++. |++.. +|+.|+-..
T Consensus 72 l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~-~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~------------- 137 (183)
T 2obi_A 72 LHARYAECGLRILAFPCNQFGKQEPGSNEE-IKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP------------- 137 (183)
T ss_dssp HHHHHGGGTEEEEEEECCCSTTCCCSCHHH-HHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTST-------------
T ss_pred HHHHHhcCCeEEEEEECCCCCCCCCCCHHH-HHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccC-------------
Confidence 999999999999999853 4443 777764 678999997 66553 444332110
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 320 PRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 320 P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
+ ..|+.+ .+....|.+||||++| +|++.|... .++++|.+.++.+
T Consensus 138 ~----------~~g~~~---~~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~l 182 (183)
T 2obi_A 138 K----------GKGILG---NAIKWNFTKFLIDKNG-CVVKRYGPM-----EEPLVIEKDLPHY 182 (183)
T ss_dssp T----------TCCSSS---SSCCSTTCEEEECTTS-CEEEEECTT-----SCTHHHHTTSGGG
T ss_pred C----------CCCccc---ccccccceEEEECCCC-CEEEEeCCC-----CCHHHHHHHHHHh
Confidence 0 001111 0122368999999997 899988753 3456776666543
No 71
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.54 E-value=2.7e-14 Score=120.45 Aligned_cols=133 Identities=13% Similarity=-0.039 Sum_probs=98.4
Q ss_pred CCCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 180 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 180 ~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
...+.+|+.+|.|.+ +. +|++++++++ +++++||.| -..||+.|+.++..|.+++.++
T Consensus 4 ~~~l~~G~~~P~f~l-~~-------------------~g~~~~l~~~-~gk~vll~F-~a~wC~~C~~~~~~l~~l~~~~ 61 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LG-------------------NDAKASFHNQ-LGRYTLLNF-WAAYDAESRARNVQLANEVNKF 61 (143)
T ss_dssp CBSSSTTSBCCCCCC-------------------------CCCSCCS-SCCEEEEEE-ECTTCHHHHHHHHHHHHHHTTS
T ss_pred ccccCCcccCCceEE-cC-------------------CCCEEEHHHh-CCCEEEEEE-EcCcCHHHHHHHHHHHHHHHHh
Confidence 346788999996666 44 4899999996 555655555 4889999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCc-eeEeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 015842 260 DALGIQLFAVLHEYIESEVKDFWP-RYWGG-VVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 334 (399)
Q Consensus 260 ~alGV~LVaIspE~~e~~ik~F~~-~~l~f-~VLsDp~---r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~ 334 (399)
.+.|+.+|+|+.+......+.|.+ ..++| ++++|+. ..+++.||+.
T Consensus 62 ~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 112 (143)
T 4fo5_A 62 GPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLR----------------------------- 112 (143)
T ss_dssp CTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGG-----------------------------
T ss_pred CcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCC-----------------------------
Confidence 988999999998755444667764 67888 8899984 5677766652
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 015842 335 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 381 (399)
Q Consensus 335 ~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~ 381 (399)
.+|.+||||++| +|++.+. ..+++-+.++
T Consensus 113 ---------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~ 141 (143)
T 4fo5_A 113 ---------KGFKNFLINDEG-VIIAANV--------TPEKLTEILK 141 (143)
T ss_dssp ---------GCCCEEEECTTS-BEEEESC--------CHHHHHHHHT
T ss_pred ---------CCCcEEEECCCC-EEEEccC--------CHHHHHHHHH
Confidence 147899999996 8988764 2456555554
No 72
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.54 E-value=4.3e-14 Score=120.26 Aligned_cols=130 Identities=10% Similarity=0.092 Sum_probs=100.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccc
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 295 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~ 295 (399)
+|++++++++ +++++||.|+ ..|||.|+.++..|.+++.+++..|+.+|+|+.+..+. ++.|.+ ..++|+++.|.+
T Consensus 13 ~G~~~~l~~~-~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~-~~~~~~~~~~~~~~~~~~~ 89 (151)
T 3raz_A 13 DNTPQSLQSL-KAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDN-IGNFLKQTPVSYPIWRYTG 89 (151)
T ss_dssp TCCEECGGGC-CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHH-HHHHHHHSCCSSCEEEECC
T ss_pred CCCEecHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHH-HHHHHHHcCCCCceEecCc
Confidence 6999999996 6666666666 89999999999999999999988999999999988765 788875 788999999874
Q ss_pred ---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCC
Q 015842 296 ---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAP 372 (399)
Q Consensus 296 ---r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad 372 (399)
..++++||.. ....|.+||||++| +|++.|.+. .+
T Consensus 90 ~~~~~~~~~~~~~------------------------------------v~~~P~~~lid~~G-~i~~~~~g~-----~~ 127 (151)
T 3raz_A 90 ANSRNFMKTYGNT------------------------------------VGVLPFTVVEAPKC-GYRQTITGE-----VN 127 (151)
T ss_dssp SCHHHHHHTTTCC------------------------------------SCCSSEEEEEETTT-TEEEECCSC-----CC
T ss_pred cchHHHHHHhCCc------------------------------------cCCCCEEEEECCCC-cEEEEECCC-----CC
Confidence 4456655521 01257899999996 899887654 46
Q ss_pred HHHHHHHHHhhhhhhcccc
Q 015842 373 LAEVIEICTQLQDQQRDQS 391 (399)
Q Consensus 373 ~eeVLaAl~~l~~~~~~~~ 391 (399)
.+++.+.++.+...+....
T Consensus 128 ~~~l~~~l~~l~~~~~~~~ 146 (151)
T 3raz_A 128 EKSLTDAVKLAHSKCREGH 146 (151)
T ss_dssp HHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHhhccc
Confidence 7888889888876665443
No 73
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=6.3e-16 Score=132.43 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=109.6
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh-ccchhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA-KKPIFD 260 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e-~~pef~ 260 (399)
.+.+|+.+|.+.|.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.+ ...++.
T Consensus 6 ~l~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~ 64 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLT-------------------DGKQVTLSSL-RGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHK 64 (159)
Confidence 4578888996666554 4899999996 6677777777 8899999999999998 888887
Q ss_pred -hcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 261 -ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 261 -alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
..++.+|+|+.+.....++.|.+ ..++|++++|++..++++||+..
T Consensus 65 ~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------------------------- 112 (159)
T 2ls5_A 65 DNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRD-------------------------------- 112 (159)
Confidence 78999999997765434667764 67899999999999988877630
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
.-.|.+||||++| +|++.+... +..+++++|+.+......
T Consensus 113 ----~~~P~~~lid~~G-~i~~~~~g~---~~~~l~~~l~~l~~~~~~ 152 (159)
T 2ls5_A 113 ----AGITRNVLIDREG-KIVKLTRLY---NEEEFASLVQQINEMLKE 152 (159)
Confidence 0146799999996 899888653 233566666666655433
No 74
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.53 E-value=5.5e-14 Score=120.62 Aligned_cols=147 Identities=13% Similarity=0.073 Sum_probs=100.7
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
++++|+.+|.|.|++. +|++++++++ +++++||.|+- .|||.|+.++..|.+++.++.+
T Consensus 4 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vlv~f~a-~~C~~C~~~~~~l~~l~~~~~~ 62 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDI-------------------NGVDVSLEKY-RGHVCLIVNVA-CKCGATDKNYRQLQEMHTRLVG 62 (169)
T ss_dssp ---CCCSGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEEEEEC-SSSTTHHHHHHHHHHHHHHHGG
T ss_pred cccCCcccccceeecC-------------------CCCCccHHHc-CCCEEEEEEee-ccCCchHHHHHHHHHHHHHhhc
Confidence 4678888997766665 4999999996 66677776664 8999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhh-cC-CCCCceeEe--ccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 015842 262 LGIQLFAVLHE--------YIESEVKDF-WP-RYWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 325 (399)
Q Consensus 262 lGV~LVaIspE--------~~e~~ik~F-~~-~~l~f~VLs--Dp~r~----lYkaLGl~r~~r~s~lsgfl~~P~v~~~ 325 (399)
.|+++|+|+.+ +++ .++.| .+ ..++|+++. |++.. +|+.+
T Consensus 63 ~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l----------------------- 118 (169)
T 2v1m_A 63 KGLRILAFPCNQFGGQEPWAEA-EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFL----------------------- 118 (169)
T ss_dssp GTEEEEEEECCCSTTCCCSCHH-HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHH-----------------------
T ss_pred CCeEEEEEECCccCCCCCCCHH-HHHHHHHHhcCCCCceEEEEeecCccccHHHHHH-----------------------
Confidence 99999999863 333 37777 33 678899996 66543 22211
Q ss_pred HHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 326 YKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 326 ~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
.....|+.+. ...-.|.+||||++| +|++.|... .+++++.+.++++-
T Consensus 119 --~~~~~~~~~~---~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 119 --KSRQHGTLTN---NIKWNFSKFLVDRQG-QPVKRYSPT-----TAPYDIEGDIMELL 166 (169)
T ss_dssp --HHHSCCSSSC---SCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred --HhhcCCccCC---cccccceEEEECCCC-CEEEEcCCC-----CCHHHHHHHHHHHh
Confidence 1111122110 112258999999997 899988763 23466666666553
No 75
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.53 E-value=1.2e-13 Score=114.80 Aligned_cols=136 Identities=10% Similarity=0.092 Sum_probs=106.3
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG 263 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alG 263 (399)
++|+.+|.+.++.. ++ +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++...
T Consensus 2 ~~g~~~P~f~~~~~---~~--------------~g~~~~~~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~- 61 (148)
T 2b5x_A 2 KLRQPMPELTGEKA---WL--------------NGEVTREQLI-GEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ- 61 (148)
T ss_dssp CTTCBCCCCCCCSE---EE--------------SCCCCHHHHT-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred CCCCCCCCCccccc---cc--------------cCcccchhhc-CCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-
Confidence 57888886665322 11 4899999986 6778888777 699999999999999988888776
Q ss_pred CeEEEEecC------ChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 015842 264 IQLFAVLHE------YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 336 (399)
Q Consensus 264 V~LVaIspE------~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~g 336 (399)
+++++|..+ +.+ .++.|.. +.++|+++.|++..+.+.||+.
T Consensus 62 ~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------- 109 (148)
T 2b5x_A 62 LNVVAVHMPRSEDDLDPG-KIKETAAEHDITQPIFVDSDHALTDAFENE------------------------------- 109 (148)
T ss_dssp SEEEEEECCCSTTTSSHH-HHHHHHHHTTCCSCEEECSSCHHHHHTCCC-------------------------------
T ss_pred cEEEEEEcCCCccccCHH-HHHHHHHHcCCCcceEECCchhHHHHhCCC-------------------------------
Confidence 999999854 344 3677774 7789999999999999988873
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 337 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 337 n~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||+|++| +|++.+.+. .+.+++.+.++.+-
T Consensus 110 -------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 110 -------YVPAYYVFDKTG-QLRHFQAGG-----SGMKMLEKRVNRVL 144 (148)
T ss_dssp -------CSSEEEEECTTC-BEEEEEESC-----STTHHHHHHHHHHH
T ss_pred -------CCCEEEEECCCC-cEEEEecCC-----CCHHHHHHHHHHHH
Confidence 147899999996 899988764 35677777777664
No 76
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.53 E-value=1.3e-13 Score=113.43 Aligned_cols=121 Identities=14% Similarity=0.107 Sum_probs=98.5
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeEeccc
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 295 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~-~~l~f~VLsDp~ 295 (399)
+|+.+++.++ +++++||.|+ ..|||.|+.++..|.+...++. ++.+++|..+.....++.|.. ..++|+++.|++
T Consensus 13 ~g~~~~l~~~-~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (136)
T 1lu4_A 13 SGAPFDGASL-QGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD 88 (136)
T ss_dssp TSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT
T ss_pred CCCeecHHHh-CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc
Confidence 4999999997 6778888888 8999999999999999888886 899999998764444777775 678999999999
Q ss_pred hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHH
Q 015842 296 MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAE 375 (399)
Q Consensus 296 r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~ee 375 (399)
..+.+.||+. ..|.+||+|++| +|+ .|.+ .....+.++
T Consensus 89 ~~~~~~~~i~--------------------------------------~~P~~~lid~~G-~i~-~~~~--~~g~~~~~~ 126 (136)
T 1lu4_A 89 GVIWARYNVP--------------------------------------WQPAFVFYRADG-TST-FVNN--PTAAMSQDE 126 (136)
T ss_dssp SHHHHHTTCC--------------------------------------SSSEEEEECTTS-CEE-EECC--SSSCCCHHH
T ss_pred hhHHHhcCCC--------------------------------------CCCEEEEECCCC-cEE-EEEc--CCCccCHHH
Confidence 9999988873 147899999996 787 6652 234567888
Q ss_pred HHHHHHhh
Q 015842 376 VIEICTQL 383 (399)
Q Consensus 376 VLaAl~~l 383 (399)
+.+.++.+
T Consensus 127 l~~~l~~l 134 (136)
T 1lu4_A 127 LSGRVAAL 134 (136)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 88888765
No 77
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.52 E-value=2e-13 Score=111.70 Aligned_cols=119 Identities=16% Similarity=0.117 Sum_probs=96.2
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCC-CceeEecc
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ 294 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~-~~l-~f~VLsDp 294 (399)
+|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++. ++++++|..+.....++.|.+ ..+ +|+++.|+
T Consensus 14 ~g~~~~l~~~-~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 89 (136)
T 1zzo_A 14 DGHDFHGESL-LGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADT 89 (136)
T ss_dssp TSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECT
T ss_pred CCCEeeHHHh-CCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcC
Confidence 4899999997 6778888888 8899999999999999888876 899999997664444777774 677 99999999
Q ss_pred chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHH
Q 015842 295 GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLA 374 (399)
Q Consensus 295 ~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~e 374 (399)
+..+.+.||+. ..|.+||+|++| +|+ .+.+. .+.+
T Consensus 90 ~~~~~~~~~i~--------------------------------------~~P~~~~id~~g-~i~-~~~g~-----~~~~ 124 (136)
T 1zzo_A 90 DGSVWANFGVT--------------------------------------QQPAYAFVDPHG-NVD-VVRGR-----MSQD 124 (136)
T ss_dssp TCHHHHHTTCC--------------------------------------SSSEEEEECTTC-CEE-EEESC-----CCHH
T ss_pred CcHHHHHcCCC--------------------------------------CCceEEEECCCC-CEE-EEecC-----CCHH
Confidence 99999988773 147899999996 787 66543 4578
Q ss_pred HHHHHHHhhh
Q 015842 375 EVIEICTQLQ 384 (399)
Q Consensus 375 eVLaAl~~l~ 384 (399)
++.+.++.+.
T Consensus 125 ~l~~~l~~~l 134 (136)
T 1zzo_A 125 ELTRRVTALT 134 (136)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 8888887653
No 78
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.51 E-value=4e-14 Score=119.48 Aligned_cols=140 Identities=10% Similarity=0.041 Sum_probs=106.8
Q ss_pred CCCCCCCC-cccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 183 PVNEKVAP-YSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 183 ~~~~~~ap-l~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
+.+|+.+| .+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++..
T Consensus 3 l~~G~~~p~~f~l~~~-------------------~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~ 61 (152)
T 2lja_A 3 LRSGNPSAASFSYPDI-------------------NGKTVSLADL-KGKYIYIDVW-ATWCGPCRGELPALKELEEKYAG 61 (152)
T ss_dssp TTTTCCCSSSCEEEET-------------------TTEEEESTTT-TTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTT
T ss_pred cccCCCCCcccEeecC-------------------CCCEeeHHHc-CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhcc
Confidence 46788888 7777665 4899999996 6667777766 89999999999999998888888
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCC-ceeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-RYWG-GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~~l~-f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
.|+.+|+|+.+.....++.|.. ..++ ++++.|++..+.+.||+.
T Consensus 62 ~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---------------------------------- 107 (152)
T 2lja_A 62 KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN---------------------------------- 107 (152)
T ss_dssp SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC----------------------------------
T ss_pred CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC----------------------------------
Confidence 8999999997765444666664 4455 468899999999988773
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
..|.+||||++| +|++.+.. ..+.+++.+.++.+....
T Consensus 108 ----~~P~~~lid~~G-~i~~~~~g-----~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 108 ----GIPRFILLDRDG-KIISANMT-----RPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp ----SSCCEEEECTTS-CEEESSCC-----CTTCHHHHHHHHHHHTCC
T ss_pred ----CCCEEEEECCCC-eEEEccCC-----CCCHHHHHHHHHHHhccc
Confidence 146899999996 78886533 345577777777765443
No 79
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.51 E-value=2.2e-13 Score=117.54 Aligned_cols=137 Identities=17% Similarity=0.079 Sum_probs=104.2
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
...+|+.+|.|.|++.. .+|+++++.++.+++++||.|+ ..|||.|+.++..|.++..+
T Consensus 21 ~~~~G~~~P~f~l~~~~-----------------~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~--- 79 (168)
T 2b1k_A 21 SALIGKPVPKFRLESLD-----------------NPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ--- 79 (168)
T ss_dssp CTTTTSBCCCCEEEESS-----------------STTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT---
T ss_pred ccccCCcCCCeEeeccc-----------------CCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC---
Confidence 45789999966665541 1488999998878888888888 78999999999998876543
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCce-eEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 015842 262 LGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 339 (399)
Q Consensus 262 lGV~LVaIspE~~e~~ik~F~~-~~l~f~-VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~ 339 (399)
|+.+|+|+.+.....++.|.+ ..++|+ ++.|++..+.+.||+.
T Consensus 80 -~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---------------------------------- 124 (168)
T 2b1k_A 80 -GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVY---------------------------------- 124 (168)
T ss_dssp -TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCC----------------------------------
T ss_pred -CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcc----------------------------------
Confidence 899999996444344677764 567888 7899999999988773
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 340 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 340 GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++.|.+. .+.+++.+.++.+.
T Consensus 125 ----~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 125 ----GAPETFLIDGNG-IIRYRHAGD-----LNPRVWEEEIKPLW 159 (168)
T ss_dssp ----SSSEEEEECTTS-BEEEEEESC-----CCHHHHHHTTHHHH
T ss_pred ----ccCEEEEECCCC-eEEEEEeCC-----CCHHHHHHHHHHHH
Confidence 147899999996 899988753 35666666665553
No 80
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.50 E-value=2.7e-13 Score=110.33 Aligned_cols=119 Identities=8% Similarity=0.066 Sum_probs=93.5
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE------ecCChhhHHhhhcC-CCC-Cc
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV------LHEYIESEVKDFWP-RYW-GG 288 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI------spE~~e~~ik~F~~-~~l-~f 288 (399)
+|++++++++ +++++||.|+ ..|||.|+.++..|.+...+ ...++.+|+| ..++.+ .++.|.+ ..+ +|
T Consensus 11 ~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 86 (138)
T 4evm_A 11 DGKTYRLSDY-KGKKVYLKFW-ASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEA-DFKNWYKGLDYKNL 86 (138)
T ss_dssp TSCEEEGGGG-TTSEEEEEEC-CTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHH-HHHHHHTTCCCTTC
T ss_pred CCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHH-HHHHHHhhcCCCCe
Confidence 4999999996 6667777666 88999999999999988777 4457889998 334444 3667765 556 89
Q ss_pred eeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 015842 289 VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 368 (399)
Q Consensus 289 ~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~g 368 (399)
+++.|++..+.+.||+. ..|.+||+|++| +|++.+.+.
T Consensus 87 ~~~~d~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~g~--- 124 (138)
T 4evm_A 87 PVLVDPSGKLLETYGVR--------------------------------------SYPTQAFIDKEG-KLVKTHPGF--- 124 (138)
T ss_dssp CEEECTTCHHHHHTTCC--------------------------------------SSSEEEEECTTC-CEEEEEESC---
T ss_pred eEEECcchHHHHHcCcc--------------------------------------cCCeEEEECCCC-cEEEeecCC---
Confidence 99999999999988873 137899999996 899988753
Q ss_pred CCCCHHHHHHHHHhh
Q 015842 369 DWAPLAEVIEICTQL 383 (399)
Q Consensus 369 Drad~eeVLaAl~~l 383 (399)
.+.+++.+.++++
T Consensus 125 --~~~~~l~~~l~~l 137 (138)
T 4evm_A 125 --MEKDAILQTLKEL 137 (138)
T ss_dssp --CCHHHHHHHHHHC
T ss_pred --CcHHHHHHHHHhh
Confidence 4578888887765
No 81
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.49 E-value=1.3e-13 Score=122.47 Aligned_cols=148 Identities=9% Similarity=-0.023 Sum_probs=101.1
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.++.+|+.+|.|.|++. +|++++++++ +++ +||++|...|||.|+.++..|++++.++.
T Consensus 21 ~~~~~g~~~p~f~l~~~-------------------~G~~v~l~~~-~Gk-~vlv~F~atwC~~C~~~~~~l~~l~~~~~ 79 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDI-------------------DGHMVNLDKY-RGF-VCIVTNVASQGGKTEVNYTQLVDLHARYA 79 (185)
T ss_dssp GGGGGCCCGGGCEEEBT-------------------TSCEEEGGGG-TTS-EEEEEEECSSSTTHHHHHHHHHHHHHHHG
T ss_pred hhccCCCCcCCceeEcC-------------------CCCEeeHHHc-CCC-EEEEEEecCCCCchHHHHHHHHHHHHHhh
Confidence 45667888887666655 4999999996 554 45556668999999999999999999999
Q ss_pred hcCCeEEEEecC--------ChhhHHhhhcC-CCCCceeEe--ccch----HHHHHhCCCcccccccccccccCHHHHHH
Q 015842 261 ALGIQLFAVLHE--------YIESEVKDFWP-RYWGGVVVY--DQGM----EFFKALGGGKLLKDKFLSGFLLNPRAIAN 325 (399)
Q Consensus 261 alGV~LVaIspE--------~~e~~ik~F~~-~~l~f~VLs--Dp~r----~lYkaLGl~r~~r~s~lsgfl~~P~v~~~ 325 (399)
+.|+++|+|+.+ +++ .+++|.+ ..++|+++. |.+. .+|+.++-.. +
T Consensus 80 ~~~v~vv~is~d~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~-------------~----- 140 (185)
T 2gs3_A 80 ECGLRILAFPCNQFGKQEPGSNE-EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP-------------K----- 140 (185)
T ss_dssp GGTEEEEEEECCTTTTCCCSCHH-HHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSG-------------G-----
T ss_pred cCCeEEEEEECcccCCCCCCCHH-HHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhc-------------c-----
Confidence 999999999853 233 3677764 678899997 4443 2555443210 0
Q ss_pred HHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 015842 326 YKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 382 (399)
Q Consensus 326 ~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~ 382 (399)
..|+.+ ....-.|.+||||++| +|++.|... .+++++.+.+++
T Consensus 141 -----~~g~~~---~~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ 183 (185)
T 2gs3_A 141 -----GKGILG---NAIKWNFTKFLIDKNG-CVVKRYGPM-----EEPLVIEKDLPH 183 (185)
T ss_dssp -----GCCSSS---SSCCSSCCEEEECTTS-CEEEEECTT-----SCGGGGGGGHHH
T ss_pred -----cccccC---CcccccceEEEECCCC-CEEEeeCCC-----CCHHHHHHHHHH
Confidence 001111 0112258999999996 899998763 334555555443
No 82
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.48 E-value=7.6e-14 Score=120.12 Aligned_cols=133 Identities=13% Similarity=0.105 Sum_probs=102.0
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
+.+|+.+|.+.+.+. +|+.++++++ +++++||.|+ ..|||+|+.++..|.++..++.
T Consensus 11 ~~~g~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~-- 67 (165)
T 3ha9_A 11 EEVLEREASFSLTTI-------------------DGEVISLNNV-GGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR-- 67 (165)
T ss_dssp HHHHHHHHCCCEEBT-------------------TSCEECGGGC-CSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--
T ss_pred ccccCcCCCCEeecC-------------------CCCEeeHHHh-CCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--
Confidence 356677775555544 4999999996 6677777777 9999999999999999888887
Q ss_pred CCeEEEEecC------------------ChhhHHhhhcC-CCC-CceeEeccchHHHHHhCCCcccccccccccccCHHH
Q 015842 263 GIQLFAVLHE------------------YIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRA 322 (399)
Q Consensus 263 GV~LVaIspE------------------~~e~~ik~F~~-~~l-~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v 322 (399)
++++|+|+.+ .....++.|.+ ..+ +|+++.| +..+.+.||+.
T Consensus 68 ~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~----------------- 129 (165)
T 3ha9_A 68 EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVR----------------- 129 (165)
T ss_dssp TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCC-----------------
T ss_pred CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCC-----------------
Confidence 9999999876 23334777775 667 9999999 88999988773
Q ss_pred HHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 323 IANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 323 ~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++ .+..++.+++.+.++.+.
T Consensus 130 ---------------------~~P~~~lid~~G-~i~~------~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 130 ---------------------SIDYIVIMDKSS-NVLY------AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp ---------------------SSSEEEEEETTC-CEEE------EEESCCHHHHHHHHHHC-
T ss_pred ---------------------CceEEEEEcCCC-cEEE------eCCCCCHHHHHHHHHHHh
Confidence 137899999997 7888 233336788888877654
No 83
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.48 E-value=3.7e-13 Score=134.10 Aligned_cols=151 Identities=11% Similarity=0.071 Sum_probs=117.3
Q ss_pred CcccccCcCCCCCCCCCCCCccc-----ccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcch
Q 015842 171 AVPRVCGCIQAPPVNEKVAPYSA-----IENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMC 245 (399)
Q Consensus 171 ~~l~a~g~~~~a~~~~~~apl~~-----L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~C 245 (399)
..+.+|.-....+.+|+.+|.|. |.+. +|++++++++ +++++||.|+ ..|||.|
T Consensus 39 ~~l~~~~~~~~~l~vG~~aPdF~~~~~wL~d~-------------------dG~~vsLsdl-~GK~vLl~F~-atwC~~C 97 (352)
T 2hyx_A 39 AQLSNCSDGAAQLESCGTAPDLKGITGWLNTP-------------------GNKPIDLKSL-RGKVVLIDFW-AYSCINC 97 (352)
T ss_dssp TTGGGSCBSCSSCCCCCBCCCCCSCCEEESSG-------------------GGCCCCGGGG-TTSEEEEEEE-CTTCHHH
T ss_pred hhhhhhhhcccccCCCCcCCCccccccccCCC-------------------CCCEEcHHHh-CCCEEEEEEE-CCCChhH
Confidence 44555555455678899999766 3333 4899999996 6667777777 6999999
Q ss_pred HHHHHHHHhccchhhhcCCeEEEEecC------ChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCccccccccccccc
Q 015842 246 RAEAHQLYAKKPIFDALGIQLFAVLHE------YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLL 318 (399)
Q Consensus 246 r~el~~L~e~~pef~alGV~LVaIspE------~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~ 318 (399)
+.++..|.++..++.+.|+.+|+|+.. +++ .++.|.+ ..++|+++.|++..+.++||+.
T Consensus 98 ~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~-~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~------------- 163 (352)
T 2hyx_A 98 QRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPG-NVAKGAANLGISYPIALDNNYATWTNYRNR------------- 163 (352)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHH-HHHHHHHHHTCCSCEEECTTSHHHHHTTCC-------------
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHH-HHHHHHHHcCCCccEEeCCcHHHHHHcCCC-------------
Confidence 999999999999999889999999853 344 3677774 6789999999999999988773
Q ss_pred CHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 319 NPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 319 ~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.+|.+||||++| +|++.|... .+.+++.+.++.+..+.
T Consensus 164 -------------------------~~Pt~~lID~~G-~Iv~~~~G~-----~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 164 -------------------------YWPAEYLIDATG-TVRHIKFGE-----GDYNVTETLVRQLLNDA 201 (352)
T ss_dssp -------------------------EESEEEEECTTS-BEEEEEESB-----CCHHHHHHHHHHHHHHH
T ss_pred -------------------------ccCEEEEEeCCC-eEEEEEcCC-----CCHHHHHHHHHHHHhhc
Confidence 147899999996 899998764 35678888777765444
No 84
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.47 E-value=1.2e-13 Score=118.51 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=98.3
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+++|+.+|.|.|.+. +|++++++++ +++++||.|+- .|||.|+.++..|.+++.++.+
T Consensus 5 ~~~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~f~a-~~C~~C~~~~~~l~~l~~~~~~ 63 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDA-------------------KENDVDLSIF-KGKVLLIVNVA-SKCGMTNSNYAEMNQLYEKYKD 63 (170)
T ss_dssp -----CCGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEEEEEC-SSSTTHHHHHHHHHHHHHHHGG
T ss_pred cCCCCccccceEEEcC-------------------CCCEecHHHh-CCCEEEEEEEe-ccCCccHHHHHHHHHHHHHhcc
Confidence 4567888886666655 4999999996 66677776664 8999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhhcC--CCCCceeE--eccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 015842 262 LGIQLFAVLHE--------YIESEVKDFWP--RYWGGVVV--YDQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 325 (399)
Q Consensus 262 lGV~LVaIspE--------~~e~~ik~F~~--~~l~f~VL--sDp~r~----lYkaLGl~r~~r~s~lsgfl~~P~v~~~ 325 (399)
.|+++|+|+.+ +.+ .++.|.+ ..++|+++ .|++.. +|+.++-.
T Consensus 64 ~~~~vv~vs~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~-------------------- 122 (170)
T 2p5q_A 64 QGLEILAFPCNQFGEEEPGTND-QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLG-------------------- 122 (170)
T ss_dssp GTEEEEEEECCTTTTCCCSCHH-HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTH--------------------
T ss_pred CCEEEEEEECCCCCCCCCCCHH-HHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhc--------------------
Confidence 99999999863 344 3677765 46889998 677653 33322100
Q ss_pred HHHHHhcCCccccCCCCcccc---eEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 326 YKRARTLGVEQNFKGEGEIKG---GLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 326 ~~rA~~~G~~gn~~GD~~qLG---GtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|+. | ..+| .+||||++| +|++.|... .+.+++.+.++.+.
T Consensus 123 -----~~~~~----~--~~~p~~~~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 123 -----KWGIF----G--DDIQWNFAKFLVNKDG-QVVDRYYPT-----TSPLSLERDIKQLL 167 (170)
T ss_dssp -----HHHTT----C--SCCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHT
T ss_pred -----CCCcc----C--CcccccccEEEECCCC-CEEEeeCCC-----CCHHHHHHHHHHHh
Confidence 00110 1 1234 899999997 899988653 34566666666653
No 85
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.47 E-value=3e-13 Score=119.23 Aligned_cols=146 Identities=12% Similarity=0.081 Sum_probs=104.8
Q ss_pred CCCCCCC-cccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccchhhh
Q 015842 184 VNEKVAP-YSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 184 ~~~~~ap-l~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cr~el~~L~e~~pef~a 261 (399)
.+|+.+| .|.|++. +|++++++++ +++++| ++|-..||| .|+.++..|++++.++.+
T Consensus 2 ~~G~~~P~~f~l~d~-------------------~G~~v~l~~~-~Gk~vl-l~F~~t~C~~~C~~~~~~l~~~~~~~~~ 60 (170)
T 3me7_A 2 SLGTYVPGDITLVDS-------------------YGNEFQLKNL-KGKPII-LSPIYTHCRAACPLITKSLLKVIPKLGT 60 (170)
T ss_dssp CTTCBCCTTCEEEET-------------------TCCEEEGGGG-TTSCEE-EEEECTTCCSHHHHHHHHHHTTHHHHCC
T ss_pred CCCCcCCCCeEEEcC-------------------CcCEEchHHh-CCCEEE-EEEECCCCCchhHHHHHHHHHHHHHhhh
Confidence 4678888 8887766 5999999996 555555 455578998 699999999999999976
Q ss_pred --cCCeEEEEecC---ChhhHHhhhcC-CCCCce---eE--ec--cchHHHHHhCCCcccccccccccccCHHHHHHHHH
Q 015842 262 --LGIQLFAVLHE---YIESEVKDFWP-RYWGGV---VV--YD--QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKR 328 (399)
Q Consensus 262 --lGV~LVaIspE---~~e~~ik~F~~-~~l~f~---VL--sD--p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~r 328 (399)
.++++|+|+.+ +++. ++.|.+ ...+++ ++ .| ...+++++||+.. . +
T Consensus 61 ~~~~~~vv~is~d~~d~~~~-~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~-----------~-~-------- 119 (170)
T 3me7_A 61 PGKDFWVITFTFDPKDTLED-IKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRF-----------M-T-------- 119 (170)
T ss_dssp BTTTBEEEEEECCTTCCHHH-HHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCC-----------E-E--------
T ss_pred cCCceEEEEEECCCCCCHHH-HHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEE-----------e-c--------
Confidence 56999999964 4443 677764 344443 22 23 4468888888751 0 0
Q ss_pred HHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 329 ARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 329 A~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
. .+.....|.+||||++| +|++.|... .+++++|+++++++..
T Consensus 120 ---~------~~~~~~~~~~~lID~~G-~i~~~~~g~----~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 120 ---A------GNDFIHPNVVVVLSPEL-QIKDYIYGV----NYNYLEFVNALRLARG 162 (170)
T ss_dssp ---E------TTEEECCCEEEEECTTS-BEEEEEESS----SCCHHHHHHHHHHHTT
T ss_pred ---C------CCccccCceEEEECCCC-eEEEEEeCC----CCCHHHHHHHHHHhhc
Confidence 0 01122357899999997 899888554 4679999999988754
No 86
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.46 E-value=3.8e-13 Score=119.92 Aligned_cols=149 Identities=11% Similarity=0.093 Sum_probs=101.0
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
..+.++.+|.|.|++. +|++++++++ +++++||.|+ ..|||.|+.++..|.+++.++.+
T Consensus 21 ~~~~~~~~p~f~l~~~-------------------~G~~~~l~~~-~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~ 79 (190)
T 2vup_A 21 HMSAASSIFDFEVLDA-------------------DHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKS 79 (190)
T ss_dssp ---CCCSGGGSCCBBT-------------------TSSBCCGGGG-TTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGG
T ss_pred cCCCCCcccCeEEEcC-------------------CCCEEEHHHc-CCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhc
Confidence 3456677786666554 4999999996 6667666664 69999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhhc-C-CCCCceeEe--ccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 015842 262 LGIQLFAVLHE--------YIESEVKDFW-P-RYWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 325 (399)
Q Consensus 262 lGV~LVaIspE--------~~e~~ik~F~-~-~~l~f~VLs--Dp~r~----lYkaLGl~r~~r~s~lsgfl~~P~v~~~ 325 (399)
.|+++|+|+.+ +++. +++|. + ..++|+++. |++.. +|+.++
T Consensus 80 ~~v~vv~vs~d~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~---------------------- 136 (190)
T 2vup_A 80 QGFTVLAFPCNQFGGQEPGNEEE-IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMK---------------------- 136 (190)
T ss_dssp GTCEEEEEECCCSTTCCCSCHHH-HHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHH----------------------
T ss_pred CCeEEEEEEcCccCCCCCCCHHH-HHHHHHHhcCCCeEEEeecccCcccccHHHHHHH----------------------
Confidence 99999999865 4443 67776 4 568899997 55543 333221
Q ss_pred HHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 326 YKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 326 ~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
....|+.+.. +.--.|.+||||++| +|++.+.. ..+.+++.+.++.+-+
T Consensus 137 ---~~~~~v~~~P--~i~~~~~~~lid~~G-~i~~~~~g-----~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 137 ---KTKPGILKTK--AIKWNFTSFLIDRDG-VPVERFSP-----GASVKDIEKKLIPLLE 185 (190)
T ss_dssp ---HHSCCGGGCC--SCCSTTCEEEECTTS-CEEEEECT-----TCCHHHHHHHHHHHHH
T ss_pred ---hhcCCcCCCc--cccccceEEEECCCC-cEEEEECC-----CCCHHHHHHHHHHHHh
Confidence 1001111100 000134899999997 89998764 3457788888877654
No 87
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.44 E-value=1.7e-12 Score=109.55 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=100.9
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
..+.+|+.+|.+.+++..-..+. ...|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..+
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~-----------~~~~~~~~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~-- 70 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQAD-----------NVQVPGLDPAAF-KGKVSLVNVW-ASWCVPCHDEAPLLTELGKD-- 70 (156)
T ss_dssp ------CBCCCCCBCCCTTCEET-----------TEECCCBCGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC--
T ss_pred hhHHhCCCCCCceeeeccCcccc-----------cccCceechHHh-CCCEEEEEEE-cccCHhHHHHHHHHHHHHhc--
Confidence 35678888996666555100000 001389999996 5678887777 59999999999999988765
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCce-eEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 015842 261 ALGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 338 (399)
Q Consensus 261 alGV~LVaIspE~~e~~ik~F~~-~~l~f~-VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~ 338 (399)
.++.+|+|+.+.....++.|.. ..++|+ ++.|+...+++.||+.
T Consensus 71 -~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--------------------------------- 116 (156)
T 1kng_A 71 -KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY--------------------------------- 116 (156)
T ss_dssp -TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC---------------------------------
T ss_pred -CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC---------------------------------
Confidence 3599999996544444777774 678898 9999999999988773
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 339 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 339 ~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|.+||||++| +|++.+.+. .+.+++.+.++.+.
T Consensus 117 -----~~P~~~~id~~G-~i~~~~~g~-----~~~~~l~~~l~~~l 151 (156)
T 1kng_A 117 -----GVPETFVVGREG-TIVYKLVGP-----ITPDNLRSVLLPQM 151 (156)
T ss_dssp -----SSCEEEEECTTS-BEEEEEESC-----CCHHHHHHTHHHHH
T ss_pred -----ccCeEEEEcCCC-CEEEEEeCC-----CCHHHHHHHHHHHH
Confidence 147899999996 899887653 35677777766654
No 88
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.44 E-value=4.2e-13 Score=119.59 Aligned_cols=146 Identities=12% Similarity=0.131 Sum_probs=101.3
Q ss_pred CCCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 181 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 181 ~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.....+..+|.|.|++. +|++++++++ +++++||.| -..|||.|..++..|.+++.+++
T Consensus 18 ~~~~~~~~~p~f~l~d~-------------------~G~~~~l~~~-~Gk~vlv~F-~atwC~~C~~~~p~l~~l~~~~~ 76 (187)
T 3dwv_A 18 KKMSAASSIFDFEVLDA-------------------DHKPYNLVQH-KGSPLLIYN-VASKCGYTKGGYETATTLYNKYK 76 (187)
T ss_dssp --CTTCCSGGGSCCBBT-------------------TSCBCCGGGG-TTSCEEEEE-ECCBCSCCTTHHHHHHHHHHHHG
T ss_pred hhhcCCCccCCeEEEcC-------------------CCCEeeHHHh-CCCEEEEEE-ecCCCCCcHHHHHHHHHHHHHhh
Confidence 34556677886666655 4999999995 666655555 58999999999999999999999
Q ss_pred hcCCeEEEEecC--------ChhhHHhhhcC-C-CCCceeEe--ccchH----HHHHhCCCcccccccccccccCHHHHH
Q 015842 261 ALGIQLFAVLHE--------YIESEVKDFWP-R-YWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIA 324 (399)
Q Consensus 261 alGV~LVaIspE--------~~e~~ik~F~~-~-~l~f~VLs--Dp~r~----lYkaLGl~r~~r~s~lsgfl~~P~v~~ 324 (399)
+.|+++|+|+.+ +.+ .+++|.+ + .++|++++ |.+.. +|+.+
T Consensus 77 ~~~~~vi~is~d~~~~~e~~~~~-~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l---------------------- 133 (187)
T 3dwv_A 77 SQGFTVLAFPSNQFGGQEPGNEE-EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYM---------------------- 133 (187)
T ss_dssp GGTCEEEEEEBCCCSSCSSSBTT-HHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHH----------------------
T ss_pred hCCeEEEEEECcccCCCCCCCHH-HHHHHHHhccCCCCceeeccccCCcchhHHHHHH----------------------
Confidence 999999999853 344 4788886 5 78999997 44332 22211
Q ss_pred HHHHHHhcCCccccCCCCcccc---eEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 325 NYKRARTLGVEQNFKGEGEIKG---GLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 325 ~~~rA~~~G~~gn~~GD~~qLG---GtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
+....+.. | .-.+| .+||||++| +|++.|... .++++|.+.++.+-
T Consensus 134 ---~~~~~~~~----~-~~~iP~~~~~~liD~~G-~i~~~~~g~-----~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 134 ---KKTKPGIL----A-TKAIKWNFTSFLIDRDG-VPVERFSPG-----ASVKDIEEKLIPLL 182 (187)
T ss_dssp ---HHHSCCSB----S-SSSCCSTTCEEEECTTS-CEEEEECTT-----CCHHHHHHHHHHHC
T ss_pred ---HhhcCCcc----C-CCccccceeEEEECCCC-CEEEEECCC-----CCHHHHHHHHHHHH
Confidence 11000110 1 01245 999999997 899998743 56778888777664
No 89
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.3e-13 Score=118.73 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=83.1
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhc-C-CCC
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFW-P-RYW 286 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp--------E~~e~~ik~F~-~-~~l 286 (399)
+|++++++++ +++++||.|+ ..|||.|+ ++..|.+++.++.+.|+.+|+|+. ++++ .++.|. + ..+
T Consensus 21 ~G~~~~l~~~-~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~-~~~~~~~~~~~~ 96 (171)
T 3cmi_A 21 KGQPFPFDQL-KGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE-EIAQFCQLNYGV 96 (171)
T ss_dssp TSCBCCGGGG-TTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-------------------CC
T ss_pred CCCEecHHHc-CCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH-HHHHHHHhccCC
Confidence 4999999996 6677777777 89999999 999999999999999999999986 3333 367776 4 578
Q ss_pred CceeEeccch------HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccc------eEEEEecC
Q 015842 287 GGVVVYDQGM------EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKG------GLFIVGRG 354 (399)
Q Consensus 287 ~f~VLsDp~r------~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLG------GtFVId~g 354 (399)
+|++++|++. .+|+.+. ....|+ ...| .+||||++
T Consensus 97 ~~p~~~d~d~~~~~~~~~~~~~~-------------------------~~~~~v--------~~~P~i~~~~~~~lid~~ 143 (171)
T 3cmi_A 97 TFPIMKKIDVNGGNEDPVYKFLK-------------------------SQKSGM--------LGLRGIKWNFEKFLVDKK 143 (171)
T ss_dssp CSCBBCCCBSSSTTBCHHHHHHH-------------------------HHSCCS--------SSCCSCCSTTCEEEECSS
T ss_pred CceEEeeccCCCccchHHHHHHH-------------------------hccCCc--------CCCCcccccceEEEECCC
Confidence 8999997652 2232110 000111 1234 89999999
Q ss_pred CCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 355 RSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 355 Gg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
| +|++.+... .+.+++.+.++.+.
T Consensus 144 G-~i~~~~~g~-----~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 144 G-KVYERYSSL-----TKPSSLSETIEELL 167 (171)
T ss_dssp S-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred C-CEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 6 899988652 34566666666654
No 90
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.44 E-value=2.3e-13 Score=117.11 Aligned_cols=147 Identities=12% Similarity=0.040 Sum_probs=107.2
Q ss_pred CCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhh
Q 015842 183 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 183 ~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cr~el~~L~e~~pef~a 261 (399)
+.+|+.+|.+.|.+. +| +++++++ ++++ ||++|...|||. |+.++..|.+++.++.+
T Consensus 10 ~~~G~~~p~f~l~~~-------------------~g-~~~l~~~-~gk~-vll~f~~~~C~~~C~~~~~~l~~~~~~~~~ 67 (172)
T 2k6v_A 10 RLLNPKPVDFALEGP-------------------QG-PVRLSQF-QDKV-VLLFFGFTRCPDVCPTTLLALKRAYEKLPP 67 (172)
T ss_dssp EEEEEEECCCEEECS-------------------SS-EEEGGGS-TTSE-EEEEEECTTCSSHHHHHHHHHHHHHTTSCH
T ss_pred cccCCCCCCeEEEcC-------------------CC-CCcHHHh-CCCE-EEEEEECCCCcchhHHHHHHHHHHHHHhhh
Confidence 345777776665554 49 9999996 5555 555556889995 99999999999999987
Q ss_pred c---CCeEEEEecC----ChhhHHhhhcC-CCCCceeEeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 015842 262 L---GIQLFAVLHE----YIESEVKDFWP-RYWGGVVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 330 (399)
Q Consensus 262 l---GV~LVaIspE----~~e~~ik~F~~-~~l~f~VLsDp~---r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~ 330 (399)
. ++++|+|+.+ +++. ++.|.+ ..++|++++|++ ..++++||+... ..+.
T Consensus 68 ~~~~~v~vv~is~d~~~d~~~~-~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~----------~~~~--------- 127 (172)
T 2k6v_A 68 KAQERVQVIFVSVDPERDPPEV-ADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQ----------KSQY--------- 127 (172)
T ss_dssp HHHTTEEEEEEESCTTTCCHHH-HHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEE----------EEEE---------
T ss_pred hccCCEEEEEEEECCCCCCHHH-HHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEE----------eccC---------
Confidence 6 7999999943 4443 777775 568999999999 689999998520 0000
Q ss_pred hcCCccccCCCC---cccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 331 TLGVEQNFKGEG---EIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 331 ~~G~~gn~~GD~---~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
. .++. ...|.+|||| +| +|++.|.... .++.++|++.++++
T Consensus 128 ------~-~~~~~~i~~~P~~~lid-~G-~i~~~~~g~~---~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 128 ------R-GPGEYLVDHTATTFVVK-EG-RLVLLYSPDK---AEATDRVVADLQAL 171 (172)
T ss_dssp ------E-ETTEEEEEECCCEEEEE-TT-EEEEEECHHH---HTCHHHHHHHHHHC
T ss_pred ------C-CCCCceEecCCEEEEEE-CC-EEEEEECCCC---CCCHHHHHHHHHHh
Confidence 0 0111 2369999999 86 8999987653 45788998888764
No 91
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.44 E-value=1.1e-12 Score=111.99 Aligned_cols=135 Identities=8% Similarity=-0.009 Sum_probs=98.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhh----cCCeEEEEecCC----hhhHHhhhcC-CCC
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDA----LGIQLFAVLHEY----IESEVKDFWP-RYW 286 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cr~el~~L~e~~pef~a----lGV~LVaIspE~----~e~~ik~F~~-~~l 286 (399)
+|++++++++ +++++||.|+ ..|||. |+.++..|++++.++.+ .++++|+|+.+. ++ .++.|.+ ..+
T Consensus 12 ~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~-~~~~~~~~~~~ 88 (164)
T 2ggt_A 12 TGERKTDKDY-LGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE-AIANYVKEFSP 88 (164)
T ss_dssp TSCEEEGGGG-TTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHH-HHHHHHHTTCS
T ss_pred CCCEEeHHHc-CCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHH-HHHHHHHHcCC
Confidence 4999999996 5566666555 589997 99999999999999987 499999999654 44 3777775 567
Q ss_pred CceeE---eccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCC--cccceEEEEecCCCcEEEE
Q 015842 287 GGVVV---YDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEG--EIKGGLFIVGRGRSGIAYQ 361 (399)
Q Consensus 287 ~f~VL---sDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~--~qLGGtFVId~gGg~I~ya 361 (399)
+|+++ .|+...+.++||+... |. ..+..++. ...+.+||||++| +|++.
T Consensus 89 ~~~~l~~~~d~~~~~~~~~~v~~~------------p~-------------~~~~~~~~~~~~~~~~~lid~~G-~i~~~ 142 (164)
T 2ggt_A 89 KLVGLTGTREEVDQVARAYRVYYS------------PG-------------PKDEDEDYIVDHTIIMYLIGPDG-EFLDY 142 (164)
T ss_dssp SCEEEECCHHHHHHHHHTTTCCEE------------EE-------------EECTTSCEEEEECCEEEEECTTS-CEEEE
T ss_pred CeEEEeCCHHHHHHHHHhcCeEEE------------ec-------------CCCCCCCeeEeccceEEEECCCC-eEEEE
Confidence 88988 4777789999988521 10 00000110 1236899999996 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhh
Q 015842 362 FIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 362 h~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
|... .+.++|++.++.+..
T Consensus 143 ~~g~-----~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 143 FGQN-----KRKGEIAASIATHMR 161 (164)
T ss_dssp EETT-----CCHHHHHHHHHHHHG
T ss_pred eCCC-----CCHHHHHHHHHHHHH
Confidence 8643 467899888887754
No 92
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.44 E-value=8.3e-13 Score=112.70 Aligned_cols=122 Identities=13% Similarity=0.138 Sum_probs=98.0
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC------ChhhHHhhhcC-CCCC-c
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE------YIESEVKDFWP-RYWG-G 288 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE------~~e~~ik~F~~-~~l~-f 288 (399)
+|+++++.++ +++++||.|+ ..|||.|+.++..|.++..++...|+++|+|+.. +.+ .++.|.. ..++ +
T Consensus 27 ~g~~~~~~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~-~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 27 DNRPASVYLK-KDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG-EFQKWYAGLNYPKL 103 (164)
T ss_dssp TSSBGGGGCC-TTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT-HHHHHHTTSCCTTS
T ss_pred CCCEeeHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH-HHHHHHHhCCCCcc
Confidence 5899999885 6778888888 8999999999999999999999999999999842 233 3566554 4666 8
Q ss_pred eeEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 015842 289 VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 368 (399)
Q Consensus 289 ~VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~g 368 (399)
+++.|++..+.+.||+. ..|.+||||++| +|++.+.+.
T Consensus 104 ~~~~d~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~g~--- 141 (164)
T 2h30_A 104 PVVTDNGGTIAQNLNIS--------------------------------------VYPSWALIGKDG-DVQRIVKGS--- 141 (164)
T ss_dssp CEEECTTCHHHHHTTCC--------------------------------------SSSEEEEECTTS-CEEEEEESC---
T ss_pred eEEEcCchHHHHHcCCC--------------------------------------ccceEEEECCCC-cEEEEEcCC---
Confidence 99999999999988873 147899999996 899988653
Q ss_pred CCCCHHHHHHHHHhhhh
Q 015842 369 DWAPLAEVIEICTQLQD 385 (399)
Q Consensus 369 Drad~eeVLaAl~~l~~ 385 (399)
.+.+++.+.++.+..
T Consensus 142 --~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 142 --INEAQALALIRNPNA 156 (164)
T ss_dssp --CCHHHHHHHHHCTTC
T ss_pred --CCHHHHHHHHHHHHH
Confidence 367888888877643
No 93
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.41 E-value=2.9e-13 Score=119.82 Aligned_cols=146 Identities=12% Similarity=-0.029 Sum_probs=94.6
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
.+++|+.+|.|.|++. +|++++++++ ++++ ||++|...|||.|+.++..|.+++.++.+
T Consensus 22 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~Gk~-vlv~F~atwC~~C~~~~p~l~~l~~~~~~ 80 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNI-------------------RGKLVSLEKY-RGSV-SLVVNVASECGFTDQHYRALQQLQRDLGP 80 (181)
T ss_dssp -----CCGGGCEEEBT-------------------TSCEEEGGGG-TTSE-EEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred cCCcCCccCceEeecC-------------------CCCEecHHHc-CCCE-EEEEEeccCCCCcHHHHHHHHHHHHHhhc
Confidence 5678888997766665 4999999995 5555 55555688999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhhcC--CCCCceeEec--cchHHHHHhCCCcccccccccccccCHHHHHHHHHH
Q 015842 262 LGIQLFAVLHE--------YIESEVKDFWP--RYWGGVVVYD--QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRA 329 (399)
Q Consensus 262 lGV~LVaIspE--------~~e~~ik~F~~--~~l~f~VLsD--p~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA 329 (399)
.|+++|+|+.+ +.+ .++.|.+ ..++|+++.| .+..... +. +......
T Consensus 81 ~~v~vv~vs~d~~~~~e~~~~~-~~~~~~~~~~~~~~p~~~~~d~~g~~~~-------------------~~-~~~~~~~ 139 (181)
T 2p31_A 81 HHFNVLAFPCNQFGQQEPDSNK-EIESFARRTYSVSFPMFSKIAVTGTGAH-------------------PA-FKYLAQT 139 (181)
T ss_dssp GTEEEEEEECCCSTTCCCSCHH-HHHHHHHHHHCCCSCBBCCCCCSSTTSC-------------------HH-HHHHHHH
T ss_pred CCEEEEEEECcCCCCCCCCCHH-HHHHHHHhhcCCCceeEeecccCCccch-------------------hh-hhhhhhc
Confidence 99999999864 343 3666663 4678999864 3322100 00 0000000
Q ss_pred HhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 330 RTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 330 ~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
+++... |. -.+||||++| +|++.|... .+++++.+.++++
T Consensus 140 ----~P~~~~---~~-~~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~l 179 (181)
T 2p31_A 140 ----SGKEPT---WN-FWKYLVAPDG-KVVGAWDPT-----VSVEEVRPQITAL 179 (181)
T ss_dssp ----HSCCCC---ST-TCEEEECTTS-CEEEEECTT-----SCHHHHHHHHHTT
T ss_pred ----CCCccc---cc-eeEEEEcCCC-CEEEEeCCC-----CCHHHHHHHHHHH
Confidence 100000 00 0799999997 899988753 4678888887764
No 94
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.40 E-value=5e-12 Score=108.78 Aligned_cols=137 Identities=7% Similarity=-0.000 Sum_probs=99.8
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhh----cCCeEEEEecC----ChhhHHhhhcC-CCC
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDA----LGIQLFAVLHE----YIESEVKDFWP-RYW 286 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cr~el~~L~e~~pef~a----lGV~LVaIspE----~~e~~ik~F~~-~~l 286 (399)
+|++++++++ +++ +||++|...|||. |+.++..|++++.++.+ .++++|+|+.+ +++ .++.|.+ ..+
T Consensus 15 ~G~~~~l~~~-~gk-~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~-~~~~~~~~~~~ 91 (171)
T 2rli_A 15 RGRARCKADF-RGQ-WVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVE-AMARYVQDFHP 91 (171)
T ss_dssp TSCEEETTTT-TTS-EEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHH-HHHHHHHTTCT
T ss_pred CCCEEeHHHh-CCC-EEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHH-HHHHHHHHcCC
Confidence 4999999996 544 4555666899997 99999999999999976 59999999965 344 3777775 567
Q ss_pred CceeEeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC--CcccceEEEEecCCCcEEEE
Q 015842 287 GGVVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE--GEIKGGLFIVGRGRSGIAYQ 361 (399)
Q Consensus 287 ~f~VLsDp~---r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD--~~qLGGtFVId~gGg~I~ya 361 (399)
+|++++|.. ..++++||+... |. .....++ ....|.+||||++| +|++.
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~v~~~------------p~-------------~~~~~~~~~~~~~~~~~lid~~G-~i~~~ 145 (171)
T 2rli_A 92 RLLGLTGSTKQVAQASHSYRVYYN------------AG-------------PKDEDQDYIVDHSIAIYLLNPDG-LFTDY 145 (171)
T ss_dssp TCCEEECCHHHHHHHHHHSCCCCE------------EC-------------CCCSSCCCCEECCCEEEEECTTS-CEEEE
T ss_pred CeEEEeCCHHHHHHHHHHhCeEEE------------ec-------------CCCCCCCeEEeccceEEEECCCC-eEEEE
Confidence 889998754 578999998521 10 0000111 12357999999996 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 362 FIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 362 h~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
|... .+.++|++.++++..+.
T Consensus 146 ~~g~-----~~~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 146 YGRS-----RSAEQISDSVRRHMAAF 166 (171)
T ss_dssp EESS-----CCHHHHHHHHHHHHHHH
T ss_pred ECCC-----CCHHHHHHHHHHHHHHH
Confidence 8654 46789998888876543
No 95
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.38 E-value=1.4e-12 Score=115.19 Aligned_cols=92 Identities=9% Similarity=-0.040 Sum_probs=71.5
Q ss_pred CCCCCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 015842 182 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 261 (399)
Q Consensus 182 a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a 261 (399)
...+|..+|.|.|++. +|++++++++ ++ ++||++|...|||.|+.++..|.+++.++.+
T Consensus 11 ~~~~~~~~p~f~l~d~-------------------~G~~v~l~~~-~G-k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~ 69 (180)
T 3kij_A 11 LKPKINSFYAFEVKDA-------------------KGRTVSLEKY-KG-KVSLVVNVASDCQLTDRNYLGLKELHKEFGP 69 (180)
T ss_dssp CCCCCCCGGGCEEEBT-------------------TSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHTT
T ss_pred hcCCcCcccceEEecC-------------------CCCEecHHHc-CC-CEEEEEEEecCCCCcHHHHHHHHHHHHHhcc
Confidence 4456667776665554 4999999996 44 5677778889999999999999999999999
Q ss_pred cCCeEEEEec--------CChhhHHhhhcC--CCCCceeEeccc
Q 015842 262 LGIQLFAVLH--------EYIESEVKDFWP--RYWGGVVVYDQG 295 (399)
Q Consensus 262 lGV~LVaIsp--------E~~e~~ik~F~~--~~l~f~VLsDp~ 295 (399)
.|+.+|+|+. ++++. ++.|.+ ..++|+++.|.+
T Consensus 70 ~~~~vi~is~d~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~d 112 (180)
T 3kij_A 70 SHFSVLAFPCNQFGESEPRPSKE-VESFARKNYGVTFPIFHKIK 112 (180)
T ss_dssp TSEEEEEEECCCSTTCCCSCHHH-HHHHHHHHHCCCSCBBCCCC
T ss_pred CCeEEEEEECCccccCCCCCHHH-HHHHHHHhcCCCCceeeeee
Confidence 9999999984 35543 677763 568888887543
No 96
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.36 E-value=3.8e-12 Score=114.93 Aligned_cols=141 Identities=9% Similarity=0.038 Sum_probs=91.3
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhhc---CCeEEEEecC----ChhhHHhhhcC-CCCC
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDAL---GIQLFAVLHE----YIESEVKDFWP-RYWG 287 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cr~el~~L~e~~pef~al---GV~LVaIspE----~~e~~ik~F~~-~~l~ 287 (399)
+|++++++++ +++++||.| ...|||. |+.++..|.+++.++.+. ++++|+|+.+ +++ .++.|.+ ...+
T Consensus 30 ~G~~v~l~~~-~Gk~vlv~F-~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~-~~~~~~~~~~~~ 106 (200)
T 2b7k_A 30 YGNEFTEKNL-LGKFSIIYF-GFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPA-VLKEYLSDFHPS 106 (200)
T ss_dssp TSCEEEGGGG-TTSCEEEEE-ECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHH-HHHHHHTTSCTT
T ss_pred CCCEEeHHHc-CCCEEEEEE-ECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHH-HHHHHHHHcCCC
Confidence 4999999996 666665555 5889996 999999999999999864 8999999976 454 3778875 4567
Q ss_pred ceeEe---ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEec
Q 015842 288 GVVVY---DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIE 364 (399)
Q Consensus 288 f~VLs---Dp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d 364 (399)
|..+. |....+.++||+.. . . |.... .|. ++ .....|.+||||++| +|++.|..
T Consensus 107 ~~~l~~~~d~~~~~~~~~gv~~----~------~-p~~~~-------~~~--~~--~~~~~~~~~liD~~G-~i~~~~~g 163 (200)
T 2b7k_A 107 ILGLTGTFDEVKNACKKYRVYF----S------T-PPNVK-------PGQ--DY--LVDHSIFFYLMDPEG-QFVDALGR 163 (200)
T ss_dssp CEEEECCHHHHHHHHHHTTC------------------------------------CTTTCCCEEEECTTS-CEEEEECT
T ss_pred ceEEeCCHHHHHHHHHHcCcEE----e------e-ccccC-------CCC--Cc--eeeecceEEEECCCC-cEEEEeCC
Confidence 77776 45678999999841 0 1 21000 000 00 011247999999997 89988764
Q ss_pred CCCCCCCCHHHHHHHHHhhh
Q 015842 365 RNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 365 ~d~gDrad~eeVLaAl~~l~ 384 (399)
. .....-.++|.+.++.+.
T Consensus 164 ~-~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 164 N-YDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp T-CCTTHHHHHHHHHHHHCC
T ss_pred C-CCHHHHHHHHHHHHHHhh
Confidence 3 222222344444444443
No 97
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.36 E-value=8.4e-12 Score=114.39 Aligned_cols=170 Identities=9% Similarity=-0.009 Sum_probs=98.8
Q ss_pred cccccCcCCCCCCCCCCCCcccccCccccccchhhhcccccccccC-CCceechhhccCCCEEEEeecCCCCcchHHHHH
Q 015842 172 VPRVCGCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTK-TPPMKALELWRESPAVLLCIRRPGCIMCRAEAH 250 (399)
Q Consensus 172 ~l~a~g~~~~a~~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~ 250 (399)
+++.++|-- ..++.+|.|.|++. + |++++++++ +++++||.|+ ..|||.|+.++.
T Consensus 12 ~~~~~~~~~---~~~~~~p~f~l~~~-------------------~~G~~v~l~~~-~Gk~vlv~Fw-atwC~~C~~e~p 67 (208)
T 2f8a_A 12 DLGTENLYF---QSMQSVYAFSARPL-------------------AGGEPVSLGSL-RGKVLLIENV-ASLGGTTVRDYT 67 (208)
T ss_dssp -------------CCCCGGGCEECBT-------------------TCSSCEEGGGG-TTSEEEEEEE-CSSSTTHHHHHH
T ss_pred cccccccch---hhcCccCceEeeeC-------------------CCCCCccHHHc-CCCEEEEEEE-CCCCccHHHHHH
Confidence 445554443 34566887666655 5 899999996 6555555554 889999999999
Q ss_pred HHHhccchhhhcCCeEEEEecC--------ChhhHHhhhc-------CCCCCceeEeccch------HHHHHhCCCcc-c
Q 015842 251 QLYAKKPIFDALGIQLFAVLHE--------YIESEVKDFW-------PRYWGGVVVYDQGM------EFFKALGGGKL-L 308 (399)
Q Consensus 251 ~L~e~~pef~alGV~LVaIspE--------~~e~~ik~F~-------~~~l~f~VLsDp~r------~lYkaLGl~r~-~ 308 (399)
.|.+++.++.+.|+++|+|+.+ +.+ .++.|. +..++|++++|.+. .+|+.++-... .
T Consensus 68 ~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~-~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~ 146 (208)
T 2f8a_A 68 QMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE-EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAP 146 (208)
T ss_dssp HHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH-HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSC
T ss_pred HHHHHHHHccCCCeEEEEEECCcccccCCCCHH-HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCc
Confidence 9999999999999999999863 233 377776 34678999986542 24443211000 0
Q ss_pred ccccccccccCHHHHHHHHHHHhcCC-cccc-CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 309 KDKFLSGFLLNPRAIANYKRARTLGV-EQNF-KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 309 r~s~lsgfl~~P~v~~~~~rA~~~G~-~gn~-~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
... ...++..+. ++ .+.+ +++..-.|.+||||++| +|++.|... .++++|.+.++.+.
T Consensus 147 ~~~-~~~~~~~~~-----------~~~~~~~~~~~i~~~p~tflID~~G-~i~~~~~g~-----~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 147 SDD-ATALMTDPK-----------LITWSPVCRNDVAWNFEKFLVGPDG-VPLRRYSRR-----FQTIDIEPDIEALL 206 (208)
T ss_dssp TTC-SSCCCSSGG-----------GCCSSSCCTTCCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred ccc-chhhccccc-----------cccccccccCccccCceEEEEcCCC-cEEEEeCCC-----CCHHHHHHHHHHHh
Confidence 000 000000000 00 0001 11222248999999997 899998753 34456666666553
No 98
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.34 E-value=2e-11 Score=113.39 Aligned_cols=159 Identities=11% Similarity=-0.041 Sum_probs=100.0
Q ss_pred CCCCCCCcccccCccccccchhhhcccccccccC-CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 015842 184 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTK-TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 262 (399)
Q Consensus 184 ~~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al 262 (399)
.....+|.|.|++. + |++|+|+++ +++ +||++|--.|||+|+ ++.+|++++.++.+.
T Consensus 30 ~~~~~~pdF~l~d~-------------------~~G~~v~Lsd~-~GK-vvll~FwAt~C~~c~-e~p~L~~l~~~~~~~ 87 (215)
T 2i3y_A 30 DEKGTIYDYEAIAL-------------------NKNEYVSFKQY-VGK-HILFVNVATYCGLTA-QYPELNALQEELKPY 87 (215)
T ss_dssp CCCCCGGGCEEEBS-------------------SSSCEEEGGGG-TTS-EEEEEEECSSSGGGG-GHHHHHHHHHHHGGG
T ss_pred cccCCcCCcEeeeC-------------------CCCCEEcHHHh-CCC-EEEEEEeCCCCCChH-hHHHHHHHHHHhccC
Confidence 44556786666655 6 899999996 555 455555688999999 999999999999999
Q ss_pred CCeEEEEec--------CChhhHHhhhcC-------CCCCceeEeccc------hHHHHHhCCCcccccccccccccCHH
Q 015842 263 GIQLFAVLH--------EYIESEVKDFWP-------RYWGGVVVYDQG------MEFFKALGGGKLLKDKFLSGFLLNPR 321 (399)
Q Consensus 263 GV~LVaIsp--------E~~e~~ik~F~~-------~~l~f~VLsDp~------r~lYkaLGl~r~~r~s~lsgfl~~P~ 321 (399)
|+.+|+|+. ++.+ .++.|.+ ..++|++++|.+ ..+|+.+.-.. ....+.+..|.
T Consensus 88 g~~Vlgvs~d~f~~~e~~~~~-~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~----~~~~~~~g~~~ 162 (215)
T 2i3y_A 88 GLVVLGFPCNQFGKQEPGDNK-EILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSC----PHPSEILGTFK 162 (215)
T ss_dssp TEEEEEEECCCSTTCCCSCHH-HHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS----CCSCSCCCCTT
T ss_pred CeEEEEEEccccCcCCCCCHH-HHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhC----ccccccccccc
Confidence 999999984 2333 3777764 457999998754 23454331100 00000000000
Q ss_pred HHHHHHHHHhcCCccccC-CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 322 AIANYKRARTLGVEQNFK-GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 322 v~~~~~rA~~~G~~gn~~-GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
..+.+... ++..-.|.+||||++| +|++.|... .++++|.+.++.+..
T Consensus 163 ----------~~~~~p~~~~~i~~npttfLID~~G-~vv~~~~g~-----~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 163 ----------SISWDPVKVHDIRWNFEKFLVGPDG-IPVMRWSHR-----ATVSSVKTDILAYLK 211 (215)
T ss_dssp ----------TCCSSSCCTTCCCSTTCEEEECTTS-CEEEEECTT-----SCHHHHHHHHHHHGG
T ss_pred ----------ccccccccccccccCceEEEECCCC-eEEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 00000000 1111137899999997 899988643 456788777777653
No 99
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.31 E-value=3.4e-11 Score=110.87 Aligned_cols=145 Identities=12% Similarity=-0.005 Sum_probs=90.4
Q ss_pred C-CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhcC----
Q 015842 217 K-TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFWP---- 283 (399)
Q Consensus 217 ~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp--------E~~e~~ik~F~~---- 283 (399)
+ |++|+|+++ +++ +||++|-..|||.| .++.+|++++.++.+.|+.+|+|+. ++.+ .++.|.+
T Consensus 26 ~~G~~v~Ls~~-kGK-vvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~-~i~~f~~~~~~ 101 (207)
T 2r37_A 26 DGEEYIPFKQY-AGK-YVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS-EILPTLKYVRP 101 (207)
T ss_dssp TSSCEEEGGGG-TTS-EEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH-HHHHHHHHTSS
T ss_pred CCCCEEcHHHh-CCC-EEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH-HHHHHHHhcch
Confidence 6 899999996 554 55555668899999 7999999999999999999999983 3333 3777764
Q ss_pred ---CCCCceeEeccc------hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC-CCCcccceEEEEec
Q 015842 284 ---RYWGGVVVYDQG------MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK-GEGEIKGGLFIVGR 353 (399)
Q Consensus 284 ---~~l~f~VLsDp~------r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~-GD~~qLGGtFVId~ 353 (399)
..++|++++|.+ ..+|+.+.-.. ....+....|.. . +..... ++..-.|.+||||+
T Consensus 102 ~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~----~~~~~~~g~~~~---------~-~~~p~~~~~i~~~~ttflID~ 167 (207)
T 2r37_A 102 GGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC----PPTSELLGTSDR---------L-FWEPMKVHDIRWNFEKFLVGP 167 (207)
T ss_dssp CTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS----CCSCSCCCCGGG---------B-CCSSCCTTCCCSTTCEEEECT
T ss_pred hhccCccceeeeEeccCCcccchHHHHHHhhC----cccccccccccc---------c-cccccccCcccccceEEEECC
Confidence 468999998754 23444331100 000000000000 0 000000 11111378999999
Q ss_pred CCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 354 GRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 354 gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
+| +|++.|... .+++++.+.++.+..
T Consensus 168 ~G-~i~~~~~g~-----~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 168 DG-IPIMRWHHR-----TTVSNVKMDILSYMR 193 (207)
T ss_dssp TS-CEEEEECTT-----SCHHHHHHHHHHHHH
T ss_pred CC-cEEEEECCC-----CCHHHHHHHHHHHHh
Confidence 97 899988643 456777777766643
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.28 E-value=5e-12 Score=106.33 Aligned_cols=108 Identities=10% Similarity=0.001 Sum_probs=81.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhcC-C-CCCceeEe-
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFWP-R-YWGGVVVY- 292 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a-lGV~LVaIspE~~e~~ik~F~~-~-~l~f~VLs- 292 (399)
+|++++++++ +++++||.|+. .|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ . ...++++.
T Consensus 17 ~g~~~~l~~~-~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (144)
T 1i5g_A 17 AAADIALPSL-AGKTVFFYFSA-SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDR 94 (144)
T ss_dssp TEEEEEGGGG-TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCH
T ss_pred CCCEecHHHc-CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCch
Confidence 4899999996 66677777665 8999999999999999988884 6999999998754444777775 2 23455554
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEecC
Q 015842 293 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFIER 365 (399)
Q Consensus 293 Dp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId-~gGg~I~yah~d~ 365 (399)
|+...+.++||+. .+|.+|||| ++| +|++.+...
T Consensus 95 d~~~~~~~~~~v~--------------------------------------~~P~~~lid~~~G-~i~~~~~~~ 129 (144)
T 1i5g_A 95 KGMEFLTTGFDVK--------------------------------------SIPTLVGVEADSG-NIITTQART 129 (144)
T ss_dssp HHHHHHHHHTTCC--------------------------------------SSSEEEEEETTTC-CEEESCHHH
T ss_pred HHHHHHHHHcCCC--------------------------------------CCCEEEEEECCCC-cEEeccchh
Confidence 6677777777663 147899999 886 788876543
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.25 E-value=2.7e-10 Score=100.79 Aligned_cols=149 Identities=11% Similarity=0.113 Sum_probs=92.5
Q ss_pred CCCCCCcccccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccchhhhcC
Q 015842 185 NEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKPIFDALG 263 (399)
Q Consensus 185 ~~~~apl~~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cr~el~~L~e~~pef~alG 263 (399)
.+..+|.|.|.|. +|++|+++++ +++++||.|+ ..||| .|..++..|.+++..+++.|
T Consensus 8 ~~~~~PdF~L~d~-------------------~G~~v~l~d~-~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~ 66 (170)
T 4hde_A 8 LNWDLETFQFTNQ-------------------DGKPFGTKDL-KGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEK 66 (170)
T ss_dssp CCBCCCCCEEECT-------------------TSCEEEHHHH-TTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCcEEECC-------------------CCCEEeHHHh-CCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhccc
Confidence 4666786666665 5999999996 6667777665 56887 68888888888777776655
Q ss_pred --CeEEEEec----CChhhHHhhhcCC----CCCceeEeccchH-HHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 015842 264 --IQLFAVLH----EYIESEVKDFWPR----YWGGVVVYDQGME-FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 332 (399)
Q Consensus 264 --V~LVaIsp----E~~e~~ik~F~~~----~l~f~VLsDp~r~-lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~ 332 (399)
+++|+|+- ++++. +++|.+. +..+..+++++.. +++.+ +....
T Consensus 67 ~~v~~v~isvDp~~Dtp~~-l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~-------------------------~~~~~ 120 (170)
T 4hde_A 67 LDVQFVSFSVDPDLDKPEN-LKAFIQKFTEDTSNWNLLTGYSLEDITKFS-------------------------KDNFQ 120 (170)
T ss_dssp CCCEEEEEESCTTTCCHHH-HHHHHTTTCSCCTTEEEEBCSCHHHHHHHH-------------------------HHHHC
T ss_pred ccceeEeeecCcccccHHH-HHHHHHHcCCCCCCceecCcccHHHHHHHH-------------------------Hhccc
Confidence 77888884 35554 6777642 2233445554432 11111 00000
Q ss_pred CCc-cccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 333 GVE-QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 333 G~~-gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
... ....|...-.+.+||||++| +|+..|.... ..+.++|++.+++|.
T Consensus 121 ~~~~~~~~~~~~H~~~~~liD~~G-~i~~~~~g~~---~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 121 SLVDKPENGQVIHGTSFYLIDQNG-KVMKKYSGIS---NTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCCBCCTTSCCBCCCEEEEECTTS-CEEEEEESSS---SCCHHHHHHHHHHHH
T ss_pred ccccCCCCceEEeeeEEEEEcCCC-eEEEEECCCC---CCCHHHHHHHHHHHh
Confidence 111 11112222247899999997 8998887643 356788988888763
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.24 E-value=8.1e-12 Score=105.51 Aligned_cols=109 Identities=9% Similarity=0.026 Sum_probs=81.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhcC-C-CCCceeEe-
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFWP-R-YWGGVVVY- 292 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a-lGV~LVaIspE~~e~~ik~F~~-~-~l~f~VLs- 292 (399)
+| .++++++ +++++||.|+. .|||.|+.++..|.++..++.+ .++++|+|+.+.....++.|.+ . ...++++.
T Consensus 18 ~g-~~~l~~~-~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (146)
T 1o8x_A 18 DG-EVEVKSL-AGKLVFFYFSA-SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQS 94 (146)
T ss_dssp TE-EEEGGGG-TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGH
T ss_pred CC-CCcHHHh-CCCEEEEEEEc-cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchh
Confidence 48 9999996 66677777765 8999999999999999988883 6899999998754444777775 2 23455554
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEecCCC
Q 015842 293 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFIERNF 367 (399)
Q Consensus 293 Dp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId-~gGg~I~yah~d~d~ 367 (399)
|++..+.+.||+. .+|.+|||| ++| +|++.+.....
T Consensus 95 d~~~~~~~~~~v~--------------------------------------~~Pt~~lid~~~G-~i~~~~~~~~~ 131 (146)
T 1o8x_A 95 EAVQKLSKHFNVE--------------------------------------SIPTLIGVDADSG-DVVTTRARATL 131 (146)
T ss_dssp HHHHHHHHHTTCC--------------------------------------SSSEEEEEETTTC-CEEESCHHHHH
T ss_pred hHHHHHHHHhCCC--------------------------------------CCCEEEEEECCCC-eEEEecchhHH
Confidence 6677777777663 147899999 886 88887655433
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.20 E-value=6.6e-12 Score=109.88 Aligned_cols=126 Identities=8% Similarity=-0.043 Sum_probs=86.9
Q ss_pred CcCCCCCCCCCCCCcc-cccCccccccchhhhcccccccccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 015842 177 GCIQAPPVNEKVAPYS-AIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 177 g~~~~a~~~~~~apl~-~L~~i~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~ 255 (399)
|+......+|+.+|.+ .|.+. +| +++++++ +++++||.|+ ..|||.|+.++..|.++
T Consensus 16 ~~~~~~~~vG~~~P~f~~l~~~-------------------~g-~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l 73 (165)
T 3s9f_A 16 PRGSHMSGVAKHLGEALKLRKQ-------------------AD-TADMDSL-SGKTVFFYFS-ASWCPPCRGFTPQLVEF 73 (165)
T ss_dssp ------CHHHHHHHHTSCEEET-------------------TE-EECSGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHH
T ss_pred ccchhhhhhcccCCcceeeecC-------------------CC-cccHHHc-CCCEEEEEEE-CCcChhHHHHHHHHHHH
Confidence 3334455667777755 45444 48 9999996 6667776666 89999999999999999
Q ss_pred cchhhh-cCCeEEEEecCChhhHHhhhcC-C-CCCceeEeccc-hHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 015842 256 KPIFDA-LGIQLFAVLHEYIESEVKDFWP-R-YWGGVVVYDQG-MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 331 (399)
Q Consensus 256 ~pef~a-lGV~LVaIspE~~e~~ik~F~~-~-~l~f~VLsDp~-r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~ 331 (399)
+.++.+ .++.+|+|+.+.....++.|.+ . ...++++.|.. ..+.+.||+.
T Consensus 74 ~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~-------------------------- 127 (165)
T 3s9f_A 74 YEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE-------------------------- 127 (165)
T ss_dssp HHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC--------------------------
T ss_pred HHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC--------------------------
Confidence 999986 7999999998766555677765 2 22344443333 5666666552
Q ss_pred cCCccccCCCCcccceEEEEecC-CCcEEEEEe
Q 015842 332 LGVEQNFKGEGEIKGGLFIVGRG-RSGIAYQFI 363 (399)
Q Consensus 332 ~G~~gn~~GD~~qLGGtFVId~g-Gg~I~yah~ 363 (399)
-+|.+||||++ | +|++.+.
T Consensus 128 ------------~~Pt~~lid~~~G-~iv~~~~ 147 (165)
T 3s9f_A 128 ------------SIPTLIGLNADTG-DTVTTRA 147 (165)
T ss_dssp ------------SSSEEEEEETTTC-CEEESCH
T ss_pred ------------CCCEEEEEeCCCC-EEEeccc
Confidence 15789999997 7 7888654
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.20 E-value=3.5e-11 Score=100.69 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=77.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh-hcCCeEEEEecCChhhHHhhhcCC--CCCceeEe-
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD-ALGIQLFAVLHEYIESEVKDFWPR--YWGGVVVY- 292 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~-alGV~LVaIspE~~e~~ik~F~~~--~l~f~VLs- 292 (399)
+| .++++++ +++++||.|+ ..|||.|+.++..|.++..++. +.++++|+|+.+.....++.|.+. ...++++.
T Consensus 18 ~g-~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (144)
T 1o73_A 18 SG-EVSLGSL-VGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQR 94 (144)
T ss_dssp TS-CBCSGGG-TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCH
T ss_pred CC-cCcHHHh-CCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccch
Confidence 48 9999996 6667776666 6899999999999999988887 468999999987654446676642 22344333
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEe
Q 015842 293 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFI 363 (399)
Q Consensus 293 Dp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId-~gGg~I~yah~ 363 (399)
|+...+.++||+. ..|.+|||| ++| +|++.+.
T Consensus 95 ~~~~~~~~~~~v~--------------------------------------~~Pt~~lid~~~G-~i~~~~~ 127 (144)
T 1o73_A 95 STVSELGKTFGVE--------------------------------------SIPTLITINADTG-AIIGTQA 127 (144)
T ss_dssp HHHHHHHHHHTCC--------------------------------------SSSEEEEEETTTC-CEEESCH
T ss_pred hHHHHHHHHcCCC--------------------------------------CCCEEEEEECCCC-eEEecch
Confidence 5566777776653 147899999 786 7887654
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.83 E-value=1.6e-12 Score=108.25 Aligned_cols=112 Identities=11% Similarity=-0.032 Sum_probs=80.9
Q ss_pred CCCceechhhccCC-CEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEecCChhhHHhhhcC-CCCC---ce
Q 015842 217 KTPPMKALELWRES-PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLHEYIESEVKDFWP-RYWG---GV 289 (399)
Q Consensus 217 ~G~~VsLsdL~~~~-pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a--lGV~LVaIspE~~e~~ik~F~~-~~l~---f~ 289 (399)
+|++++++++++++ ++||.|+. .|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ ..++ ++
T Consensus 13 ~g~~~~l~~~~~gk~~vll~F~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~ 91 (143)
T 2lus_A 13 NRCEVNANEALKDKDIIGFYFSA-HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIP 91 (143)
Confidence 49999999966776 77766664 9999999999999999988853 5899999987644334666664 3333 34
Q ss_pred eEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 015842 290 VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 368 (399)
Q Consensus 290 VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~g 368 (399)
+..|+...++++||+. ..|.+||||++| +|++.+...+..
T Consensus 92 ~~~~~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~~~~~~ 131 (143)
T 2lus_A 92 YRSGPASNVTAKYGIT--------------------------------------GIPALVIVKKDG-TLISMNGRGEVQ 131 (143)
Confidence 5566666677666552 146799999986 788886555544
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.69 E-value=8.8e-08 Score=89.06 Aligned_cols=129 Identities=13% Similarity=0.023 Sum_probs=93.9
Q ss_pred Cceechhhc-cCCCEEEEeecCCCCcchHH-HHHHHHhccchh-hhcCC-eEEEEecCChhhHHhhhcC-----CCCCce
Q 015842 219 PPMKALELW-RESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIF-DALGI-QLFAVLHEYIESEVKDFWP-----RYWGGV 289 (399)
Q Consensus 219 ~~VsLsdL~-~~~pvVLvFyRg~gCP~Cr~-el~~L~e~~pef-~alGV-~LVaIspE~~e~~ik~F~~-----~~l~f~ 289 (399)
+++++++++ ++++|||+++.+.+.|-|.. ++-.+.+.++++ ++.|+ .+++|+-.++= ..+.|.+ ....+.
T Consensus 58 ~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd~I~ciSVND~F-Vm~AW~k~~~~~~~~~i~ 136 (199)
T 4h86_A 58 QTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPF-ANQAWAKSLGVKDTTHIK 136 (199)
T ss_dssp EEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCCEEEEEESSCHH-HHHHHHHHTTCCCCSSEE
T ss_pred eeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCcEEEEEEcCCHH-HHHHHHHHhccccccccc
Confidence 478888887 47789999999999999986 688898888765 88998 57778877663 3555653 234678
Q ss_pred eEeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCC
Q 015842 290 VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD 369 (399)
Q Consensus 290 VLsDp~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gD 369 (399)
+++|++..+.++||+... . ++ |...-..-++||+ +| +|.|.+++.+.++
T Consensus 137 ~laD~~~eftkalGl~~~--~----~~-----------------------gg~RS~Rya~IVd-DG-vV~~~~vE~~pg~ 185 (199)
T 4h86_A 137 FASDPGCAFTKSIGFELA--V----GD-----------------------GVYWSGRWAMVVE-NG-IVTYAAKETNPGT 185 (199)
T ss_dssp EEECGGGHHHHHTTCEEE--E----ET-----------------------TEEEECSEEEEEE-TT-EEEEEEECSSTTT
T ss_pred ccCCcchHHHHhcCceee--c----CC-----------------------CcceeeEEEEEEE-CC-EEEEEEEeCCCCC
Confidence 999999999999998520 0 00 0001124689999 65 8999999998765
Q ss_pred C---CCHHHHHHH
Q 015842 370 W---APLAEVIEI 379 (399)
Q Consensus 370 r---ad~eeVLaA 379 (399)
. -..+.||+.
T Consensus 186 ~~~vS~ae~vL~~ 198 (199)
T 4h86_A 186 DVTVSSVESVLAH 198 (199)
T ss_dssp CCSTTSHHHHHTT
T ss_pred CCcccCHHHHHhc
Confidence 4 356667654
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.38 E-value=2.6e-06 Score=69.89 Aligned_cols=97 Identities=9% Similarity=0.104 Sum_probs=68.2
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCCCc
Q 015842 227 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGK 306 (399)
Q Consensus 227 ~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~r 306 (399)
.+++++||.|+ ..|||+|+.....|.++..++. .++.++.|..+ .|.+..+.+.||+.
T Consensus 24 ~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~-------------------~d~~~~~~~~~~v~- 81 (126)
T 2l57_A 24 KEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE-------------------EEKNIDLAYKYDAN- 81 (126)
T ss_dssp CSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-------------------SSHHHHHHHHTTCC-
T ss_pred hCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-------------------CCchHHHHHHcCCc-
Confidence 34556666655 7899999999999988777765 57888888743 23344566666653
Q ss_pred ccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 015842 307 LLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 386 (399)
Q Consensus 307 ~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~ 386 (399)
..|.+++++++| ++++.+.+ ..+.+++.+.++.+...
T Consensus 82 -------------------------------------~~Pt~~~~~~~G-~~~~~~~G-----~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 82 -------------------------------------IVPTTVFLDKEG-NKFYVHQG-----LMRKNNIETILNSLGVK 118 (126)
T ss_dssp -------------------------------------SSSEEEEECTTC-CEEEEEES-----CCCHHHHHHHHHHHCCC
T ss_pred -------------------------------------ceeEEEEECCCC-CEEEEecC-----CCCHHHHHHHHHHHhcc
Confidence 147899999886 78887764 34678888888876544
Q ss_pred hc
Q 015842 387 QR 388 (399)
Q Consensus 387 ~~ 388 (399)
..
T Consensus 119 ~~ 120 (126)
T 2l57_A 119 EG 120 (126)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.25 E-value=1.5e-06 Score=74.97 Aligned_cols=112 Identities=9% Similarity=0.005 Sum_probs=71.5
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh---hcCCeEEEEecCChhhHHhhhcCCCCCceeEecc
Q 015842 218 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD---ALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 218 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~---alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp 294 (399)
|+.+.+.+ .+++++||.|+...|||.|+.+...|.+. +++. ..++.+|.|..+... .++++ +.|.
T Consensus 37 ~~~~~~a~-~~gk~vlv~F~ga~wC~~C~~~~p~l~~~-~~~~~~~~~~~~~v~vd~~~~~---------~~~~~-~~~~ 104 (154)
T 2ju5_A 37 AEALEHSK-QDHKPIGLFFTGSDWCMWCIKMQDQILQS-SEFKHFAGVHLHMVEVDFPQKN---------HQPEE-QRQK 104 (154)
T ss_dssp HHHHHHHH-HHCCCEEEEEECTTTCHHHHHHHHHTTTS-HHHHHHHHHHCEEEEEECCSSC---------CCCHH-HHHH
T ss_pred HHHHHHHH-hCCCeEEEEEeCCCCCHhHHHHHHHHhcC-HHHHHHhcCcEEEEEecCcccc---------CCChh-hHhh
Confidence 45556665 36778888888889999999999988431 2222 234555555533211 23333 2445
Q ss_pred chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHH
Q 015842 295 GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLA 374 (399)
Q Consensus 295 ~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~e 374 (399)
...+.+.||+. ..|.++|+|++| ++++.+ +.. ..+.+
T Consensus 105 ~~~l~~~~~v~--------------------------------------~~Pt~~~~d~~G-~~~~~~-G~~---~~~~~ 141 (154)
T 2ju5_A 105 NQELKAQYKVT--------------------------------------GFPELVFIDAEG-KQLARM-GFE---PGGGA 141 (154)
T ss_dssp HHHHHHHTTCC--------------------------------------SSSEEEEECTTC-CEEEEE-CCC---TTCHH
T ss_pred HHHHHHHcCCC--------------------------------------CCCEEEEEcCCC-CEEEEe-cCC---CCCHH
Confidence 55555555442 158999999996 788877 432 34788
Q ss_pred HHHHHHHhhh
Q 015842 375 EVIEICTQLQ 384 (399)
Q Consensus 375 eVLaAl~~l~ 384 (399)
++++.++.+.
T Consensus 142 ~l~~~l~~~l 151 (154)
T 2ju5_A 142 AYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.11 E-value=2.2e-06 Score=71.86 Aligned_cols=103 Identities=10% Similarity=0.026 Sum_probs=64.0
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 220 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L---~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
...++++ +++++||.|+ ..||+.|+.....+ .++..++. ++.++.|..+.. .|...
T Consensus 23 ~~~l~~~-~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~-----------------~~~~~ 81 (134)
T 2fwh_A 23 NQALVEA-KGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAN-----------------DAQDV 81 (134)
T ss_dssp HHHHHHH-TTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTC-----------------CHHHH
T ss_pred HHHHHHh-cCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCC-----------------cchHH
Confidence 3445553 4678888877 69999999987655 44444443 577777765421 13445
Q ss_pred HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEE--EEEecCCCCCCCCHH
Q 015842 297 EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIA--YQFIERNFGDWAPLA 374 (399)
Q Consensus 297 ~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~--yah~d~d~gDrad~e 374 (399)
.+.+.||+. ..|.++++|++| +++ +.+ ....+.+
T Consensus 82 ~l~~~~~v~--------------------------------------~~Pt~~~~d~~G-~~v~~~~~-----~G~~~~~ 117 (134)
T 2fwh_A 82 ALLKHLNVL--------------------------------------GLPTILFFDGQG-QEHPQARV-----TGFMDAE 117 (134)
T ss_dssp HHHHHTTCC--------------------------------------SSSEEEEECTTS-CBCGGGCB-----CSCCCHH
T ss_pred HHHHHcCCC--------------------------------------CCCEEEEECCCC-CEeeeeee-----eeccCHH
Confidence 556655552 147899999986 564 333 3345788
Q ss_pred HHHHHHHhhhhhh
Q 015842 375 EVIEICTQLQDQQ 387 (399)
Q Consensus 375 eVLaAl~~l~~~~ 387 (399)
++.+.++.+++.+
T Consensus 118 ~l~~~l~~~~~~~ 130 (134)
T 2fwh_A 118 TFSAHLRDRQPHH 130 (134)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHhcCccc
Confidence 9999988887654
No 110
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.89 E-value=0.00014 Score=57.94 Aligned_cols=86 Identities=13% Similarity=0.127 Sum_probs=58.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCCCccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGKLL 308 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~r~~ 308 (399)
++++||.|+. .|||.|+.....|.++..++. ++.++.|-.+. ....+.+.||+.
T Consensus 24 ~~~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~--------------------~~~~~~~~~~v~--- 77 (111)
T 2pu9_C 24 DKPVVLDMFT-QWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGIR--- 77 (111)
T ss_dssp TSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCCS---
T ss_pred CCEEEEEEEC-CcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc--------------------chHHHHHHcCCC---
Confidence 5677777765 999999999999888766654 57777776431 234566666653
Q ss_pred ccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 309 KDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 309 r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
..|. |++.++| ++.+.+.+.+ .+++.+.++.+
T Consensus 78 -----------------------------------~~Pt-~~~~~~G-~~~~~~~G~~------~~~l~~~l~~~ 109 (111)
T 2pu9_C 78 -----------------------------------VVPT-FKILKEN-SVVGEVTGAK------YDKLLEAIQAA 109 (111)
T ss_dssp -----------------------------------BSSE-EEEESSS-SEEEEEESSC------HHHHHHHHHHH
T ss_pred -----------------------------------eeeE-EEEEeCC-cEEEEEcCCC------HHHHHHHHHHh
Confidence 1354 7788886 7877776542 56777777665
No 111
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=4.7e-05 Score=62.30 Aligned_cols=94 Identities=13% Similarity=0.219 Sum_probs=58.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHh---ccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCC
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 304 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e---~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl 304 (399)
+++++||.|+ ..|||.|+.....+.+ ....+ ..++.++.|-.+. |....+.+.||+
T Consensus 26 ~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~-------------------~~~~~~~~~~~v 84 (130)
T 2kuc_A 26 EDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEK-------------------GEGVELRKKYGV 84 (130)
T ss_dssp HSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSS-------------------TTHHHHHHHTTC
T ss_pred cCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCC-------------------cchHHHHHHcCC
Confidence 5667777666 7999999998887732 11111 1123333332221 244556666655
Q ss_pred CcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 305 GKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 305 ~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
. ..|.++++|++| ++.+.+.+. .+.+++.+.++.+.
T Consensus 85 ~--------------------------------------~~Pt~~~~d~~G-~~~~~~~G~-----~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 85 H--------------------------------------AYPTLLFINSSG-EVVYRLVGA-----EDAPELLKKVKLGV 120 (130)
T ss_dssp C--------------------------------------SSCEEEEECTTS-CEEEEEESC-----CCHHHHHHHHHHHH
T ss_pred C--------------------------------------CCCEEEEECCCC-cEEEEecCC-----CCHHHHHHHHHHHH
Confidence 3 147899999986 788877653 36788888888765
Q ss_pred hh
Q 015842 385 DQ 386 (399)
Q Consensus 385 ~~ 386 (399)
..
T Consensus 121 ~~ 122 (130)
T 2kuc_A 121 ES 122 (130)
T ss_dssp SC
T ss_pred Hh
Confidence 43
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.88 E-value=4.6e-05 Score=62.90 Aligned_cols=101 Identities=13% Similarity=0.251 Sum_probs=69.2
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHH--hccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCCC
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLY--AKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~--e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
.++++||. |-..||+.|+.....|. +...++.. ++.++.|..+. .|....+.+.||+.
T Consensus 28 ~~k~vlv~-f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v~ 87 (133)
T 3fk8_A 28 THKPTLLV-FGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGDP 87 (133)
T ss_dssp HTCCEEEE-EECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTCG
T ss_pred cCCcEEEE-EcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCCc
Confidence 35565554 55889999999999888 66666644 57888776532 24566677777763
Q ss_pred cccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CCCHHHHHHHHHhh
Q 015842 306 KLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WAPLAEVIEICTQL 383 (399)
Q Consensus 306 r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gD--rad~eeVLaAl~~l 383 (399)
. + ...|.++++|++| ++++.+....... ..+.+++.+.++.+
T Consensus 88 ~-------------~----------------------~~~Pt~~~~d~~G-~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 88 I-------------Q----------------------DGIPAVVVVNSDG-KVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp G-------------G----------------------GCSSEEEEECTTS-CEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred c-------------C----------------------CccceEEEECCCC-CEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 0 0 1258899999996 8998887744432 35677777777765
Q ss_pred h
Q 015842 384 Q 384 (399)
Q Consensus 384 ~ 384 (399)
.
T Consensus 132 ~ 132 (133)
T 3fk8_A 132 T 132 (133)
T ss_dssp H
T ss_pred c
Confidence 3
No 113
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.80 E-value=0.0002 Score=58.12 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=31.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
+++++||.|+ ..|||.|+.....|.+...++. ++.++.|-.
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~ 76 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDC 76 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEEC
T ss_pred CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEec
Confidence 4567777777 7999999999999887766654 577776654
No 114
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.78 E-value=0.00015 Score=55.83 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=31.6
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
.++.++++.+|++|...|||.|+.....|.+...++.. +.++.|..
T Consensus 10 ~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~ 55 (104)
T 2e0q_A 10 DSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNS 55 (104)
T ss_dssp HHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEET
T ss_pred HHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEEC
Confidence 33334444445555589999999999988887666644 77777764
No 115
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.67 E-value=0.0001 Score=61.19 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=59.7
Q ss_pred ccCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEecc
Q 015842 215 KTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 215 ~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp 294 (399)
+.+|..+.++++ +++++||.|| ..|||+|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.|+
T Consensus 38 ~~~~~~~~l~~~-~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 114 (141)
T 3hxs_A 38 DYENHSKEWKYL-GDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWFVPM 114 (141)
T ss_dssp CCSSCCCCCCCC-CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEECS
T ss_pred ccccchhHHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEEEeC
Confidence 345777777764 6678887777 58999999999999888777764 58888888766554455554467777788888
Q ss_pred chHH
Q 015842 295 GMEF 298 (399)
Q Consensus 295 ~r~l 298 (399)
+..+
T Consensus 115 ~g~~ 118 (141)
T 3hxs_A 115 KGEP 118 (141)
T ss_dssp SSCC
T ss_pred CCCE
Confidence 7654
No 116
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.67 E-value=0.00043 Score=54.68 Aligned_cols=88 Identities=10% Similarity=0.074 Sum_probs=58.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCCCccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGKLL 308 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~r~~ 308 (399)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+. +..+.+.||+.
T Consensus 25 ~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~---------------------~~~~~~~~~v~--- 78 (115)
T 1thx_A 25 EQPVLVYFW-ASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDP---------------------NPTTVKKYKVE--- 78 (115)
T ss_dssp SSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTT---------------------CHHHHHHTTCC---
T ss_pred CceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCC---------------------CHHHHHHcCCC---
Confidence 445555555 68999999999999887766654 37777776432 23455655553
Q ss_pred ccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 015842 309 KDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 384 (399)
Q Consensus 309 r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~ 384 (399)
..|..+++ ++| ++.+.+.+. .+.+++.+.++.+.
T Consensus 79 -----------------------------------~~Pt~~~~-~~G-~~~~~~~g~-----~~~~~l~~~l~~~l 112 (115)
T 1thx_A 79 -----------------------------------GVPALRLV-KGE-QILDSTEGV-----ISKDKLLSFLDTHL 112 (115)
T ss_dssp -----------------------------------SSSEEEEE-ETT-EEEEEEESC-----CCHHHHHHHHHHHH
T ss_pred -----------------------------------ceeEEEEE-cCC-EEEEEecCC-----CCHHHHHHHHHHHh
Confidence 14678888 665 777766543 45678877777654
No 117
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.63 E-value=0.00022 Score=57.23 Aligned_cols=94 Identities=11% Similarity=0.004 Sum_probs=61.9
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhC
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALG 303 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLG 303 (399)
.+..+++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+. +..+.+.||
T Consensus 12 ~~~~~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~ 68 (112)
T 2voc_A 12 SAETSEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE---------------------NQETAGKYG 68 (112)
T ss_dssp HHHHSSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CCSHHHHTT
T ss_pred HHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC---------------------CHHHHHHcC
Confidence 33335556666655 59999999999999887777754 57887776432 233555555
Q ss_pred CCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 304 GGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 304 l~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
+. ..|..+++ ++| ++.+.+.+. .+.+++.+.++..
T Consensus 69 v~--------------------------------------~~Pt~~~~-~~G-~~~~~~~G~-----~~~~~l~~~l~~~ 103 (112)
T 2voc_A 69 VM--------------------------------------SIPTLLVL-KDG-EVVETSVGF-----KPKEALQELVNKH 103 (112)
T ss_dssp CC--------------------------------------SBSEEEEE-ETT-EEEEEEESC-----CCHHHHHHHHHTT
T ss_pred CC--------------------------------------cccEEEEE-eCC-EEEEEEeCC-----CCHHHHHHHHHHH
Confidence 52 14778888 675 787776643 4567777777665
Q ss_pred hh
Q 015842 384 QD 385 (399)
Q Consensus 384 ~~ 385 (399)
..
T Consensus 104 ~~ 105 (112)
T 2voc_A 104 LL 105 (112)
T ss_dssp SC
T ss_pred HH
Confidence 43
No 118
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.63 E-value=0.00046 Score=55.69 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=30.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..
T Consensus 34 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~vd~ 73 (122)
T 2vlu_A 34 KKLVVIDFT-ASWCGPCRIMAPVFADLAKKFP--NAVFLKVDV 73 (122)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEET
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEEC
Confidence 567777776 7899999999998887766654 377776654
No 119
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.54 E-value=0.0002 Score=59.91 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=62.4
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhC
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALG 303 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLG 303 (399)
.+.+++ ++||.|+ ..||+.|+.....|.++..++. +.++.|..+.... ....|....+.+.||
T Consensus 27 ~~~~~~-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~------------~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 27 RQLLQG-DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIG------------ERELSAARLEMNKAG 89 (135)
T ss_dssp HHHHTS-SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCC------------HHHHHHHHHHHHHHT
T ss_pred HHHhCC-cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchh------------hhhhhhhHHHHHHcC
Confidence 344555 7666665 7899999999998888776653 7888887544321 011233344555554
Q ss_pred CCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 304 GGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 304 l~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
+. ..| +|++..+| +++..+.+. .+.+.+.+.++.+
T Consensus 90 v~--------------------------------------~~P-t~~~~~~G-~~v~~~~G~-----~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 VE--------------------------------------GTP-TLVFYKEG-RIVDKLVGA-----TPWSLKVEKAREI 124 (135)
T ss_dssp CC--------------------------------------SSS-EEEEEETT-EEEEEEESC-----CCHHHHHHHHHHH
T ss_pred Cc--------------------------------------eeC-eEEEEcCC-EEEEEEeCC-----CCHHHHHHHHHHH
Confidence 42 147 56665575 788877764 4566666777776
Q ss_pred hhhhc
Q 015842 384 QDQQR 388 (399)
Q Consensus 384 ~~~~~ 388 (399)
.+.+.
T Consensus 125 ~~~~~ 129 (135)
T 3emx_A 125 YGGEG 129 (135)
T ss_dssp C----
T ss_pred hCCCc
Confidence 65543
No 120
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.47 E-value=0.001 Score=55.12 Aligned_cols=41 Identities=7% Similarity=-0.047 Sum_probs=31.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
+++++||.|+. .||+.|+.....|.++..++. ++.++.|..
T Consensus 45 ~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~ 85 (139)
T 3d22_A 45 DGKIVLANFSA-RWCGPSRQIAPYYIELSENYP--SLMFLVIDV 85 (139)
T ss_dssp HTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCT--TSEEEEEET
T ss_pred cCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCC--CCEEEEEeC
Confidence 46677777765 899999999999988776662 678877764
No 121
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.46 E-value=0.001 Score=54.03 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=30.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
++++||.|+ ..|||.|+.....|.+...++.. ++.++.|..
T Consensus 31 ~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~ 71 (119)
T 1w4v_A 31 ETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDI 71 (119)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEET
T ss_pred CCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeC
Confidence 456666666 89999999999998887666643 467766653
No 122
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.44 E-value=3.9e-05 Score=62.87 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=52.6
Q ss_pred CCCceechh-hccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEecc
Q 015842 217 KTPPMKALE-LWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 217 ~G~~VsLsd-L~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp 294 (399)
+|....+.+ +.+.++.+|++|-..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|.-++.|.
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred cCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 466666763 4443444444555799999999999998877766 579999998776544345555456777677776
No 123
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.40 E-value=0.00025 Score=55.32 Aligned_cols=73 Identities=10% Similarity=0.068 Sum_probs=49.3
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
.+..+++++||.|+ ..|||.|+.....|.+...++... +.++.|..+......+.|.-..+|.-++.+.++.+
T Consensus 14 ~~~~~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 86 (106)
T 3die_A 14 DSKVESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPV 86 (106)
T ss_dssp HHHSCSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred HHHhcCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEE
Confidence 34445666666665 899999999999998887777643 88888887665543455544556655555544443
No 124
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.39 E-value=0.0012 Score=54.51 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=28.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..
T Consensus 38 ~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~ 77 (124)
T 1xfl_A 38 KTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDT 77 (124)
T ss_dssp TCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEET
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEEC
Confidence 445555554 5999999999999887766654 566666653
No 125
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.38 E-value=0.00025 Score=58.02 Aligned_cols=74 Identities=9% Similarity=0.038 Sum_probs=50.4
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
+.+++++++.+|++|-..|||.|+.....|.++..++...|+.++.|..+......+.|.-..+|.-++.+.++
T Consensus 26 f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~ 99 (121)
T 2j23_A 26 FKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQ 99 (121)
T ss_dssp HHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTE
T ss_pred HHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCe
Confidence 34455555444455557999999999999998888888778999999877654434555435566555555443
No 126
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.23 E-value=0.00047 Score=53.49 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=44.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
++++||.|+ ..|||.|+.....|.+...++. ++.++.|..+......+.|.-..+|.-++.+.++
T Consensus 19 ~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 19 GRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEeCCc
Confidence 456665555 8999999999999988776664 7999999877654434555435666555554433
No 127
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.20 E-value=0.0005 Score=53.63 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=41.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.
T Consensus 20 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 20 SGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 445555555 79999999999999887777754 688888876654433444543455544444
No 128
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.16 E-value=0.00021 Score=62.29 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=48.0
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhh-HHhhhcC--CCCCceeEeccchHH
Q 015842 227 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIES-EVKDFWP--RYWGGVVVYDQGMEF 298 (399)
Q Consensus 227 ~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~-~ik~F~~--~~l~f~VLsDp~r~l 298 (399)
.+++|+||.|+ ..|||.|+.+...|.+.. +....++.++.|..+.... ....|.- ..+|.-++.|++.++
T Consensus 44 ~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~-~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 44 ASGLPLMVIIH-KSWCGACKALKPKFAEST-EISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHTCCEEEEEE-CTTCHHHHHHHHHHHTCH-HHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred hcCCeEEEEEE-CCCCHHHHHHHHHHHHHH-HHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 35678887777 799999999999998853 3444467888887654432 1334443 447777888877554
No 129
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.13 E-value=0.0036 Score=52.41 Aligned_cols=41 Identities=15% Similarity=0.293 Sum_probs=29.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
++++||.|+ ..||+.|+.....|.++..++.. .+.++.|-.
T Consensus 24 ~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~ 64 (140)
T 3hz4_A 24 KKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINI 64 (140)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEET
T ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEEC
Confidence 456665555 78999999999999887776654 366666653
No 130
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.06 E-value=0.00085 Score=53.78 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=52.1
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 220 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
.-.+.++.++++.||++|-..||+.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.-++.+.++.+
T Consensus 14 ~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 90 (109)
T 3f3q_A 14 ASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEV 90 (109)
T ss_dssp HHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEE
Confidence 34456666655556666668899999999999888776664 488888877655443445544566766666655443
No 131
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.03 E-value=0.00084 Score=52.66 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=47.0
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al--GV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
+.+++.++++||.| -..||+.|+.....|.+...++... ++.++.|-.+......+.|.-..+|.-++...++.
T Consensus 15 ~~~~~~~~~~lv~f-~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 90 (111)
T 3uvt_A 15 FDDTIAEGITFIKF-YAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKK 90 (111)
T ss_dssp HHHHHHSSEEEEEE-ECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHhcCCcEEEEE-ECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcE
Confidence 34445566665555 5689999999999888877665543 67777787665544344454355665455444433
No 132
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.00 E-value=0.0013 Score=52.31 Aligned_cols=62 Identities=11% Similarity=0.093 Sum_probs=42.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++..
T Consensus 28 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 89 (118)
T 2vm1_A 28 GKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPTFLFIK 89 (118)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSEEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcEEEEEe
Confidence 567776666 5899999999998888776664 7889888876544334445434555444443
No 133
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0017 Score=51.50 Aligned_cols=65 Identities=9% Similarity=-0.012 Sum_probs=42.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEecc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp 294 (399)
++++||.| -..|||.|+.....|.++..+++..++.++.|-.+......+.|.-..+|.-++...
T Consensus 21 ~~~~~v~f-~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 85 (112)
T 3d6i_A 21 DKLIVLYF-HTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHK 85 (112)
T ss_dssp TCCEEEEE-ECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred CCEEEEEE-ECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEEC
Confidence 45555555 568999999999999888777766689999998765544344554345555444433
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.95 E-value=0.0014 Score=51.19 Aligned_cols=67 Identities=10% Similarity=0.072 Sum_probs=42.6
Q ss_pred hhccC-CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 225 ELWRE-SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 225 dL~~~-~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++.+. +++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|--++..
T Consensus 12 ~~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 79 (105)
T 1nsw_A 12 QAIQGDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILFK 79 (105)
T ss_dssp HHHSSSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred HHHhCCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCccccEEEEEe
Confidence 44444 45555554 79999999999998887666654 3788888766544334444434555444443
No 135
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.94 E-value=0.002 Score=53.05 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=46.5
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alG--V~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
.++..+++.+|++|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|.-++.+.+
T Consensus 28 ~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 28 DNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKG 101 (140)
T ss_dssp HHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEECC
Confidence 3444555556666667999999999999998888887764 66666665543333444443455655555433
No 136
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.92 E-value=0.0021 Score=49.82 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=41.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.
T Consensus 18 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 18 EVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 456766666 69999999999999887766654 378888876654433444443455543333
No 137
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.92 E-value=0.0012 Score=52.83 Aligned_cols=64 Identities=8% Similarity=-0.033 Sum_probs=43.3
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 288 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f 288 (399)
+.++.++++.+|++|-..||+.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.
T Consensus 19 f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt 82 (112)
T 1syr_A 19 FDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITSMPT 82 (112)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred HHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 44555555555555568899999999999988776664 68999998765544344454345554
No 138
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.88 E-value=0.0019 Score=51.93 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=49.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFK 300 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYk 300 (399)
++++||.| -..||+.|+.....|.++..++.. ++.++.|-.+......+.|.-..+|--++.|.+..+.+
T Consensus 21 ~~~~lv~f-~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~ 90 (122)
T 3aps_A 21 KTHWVVDF-YAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKS 90 (122)
T ss_dssp SSCEEEEE-ECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTE
T ss_pred CCeEEEEE-ECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccce
Confidence 34555555 568999999999999887777654 68888888765544345554456777777777776443
No 139
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.86 E-value=0.0016 Score=50.67 Aligned_cols=66 Identities=8% Similarity=0.071 Sum_probs=44.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
++++||.|+ ..|||.|+.....|.+...++. ++.++.|-.+......+.|.-..+|--++.+.++.
T Consensus 20 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 20 DKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 456665555 5899999999999988776664 48888888766544345554355665555555443
No 140
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.85 E-value=0.0022 Score=50.71 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=39.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 288 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f 288 (399)
++++||.| -..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|-
T Consensus 23 ~~~~vv~f-~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 80 (112)
T 1t00_A 23 DKPVLVDF-WAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPT 80 (112)
T ss_dssp SSCEEEEE-ECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCeEEEEE-ECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccE
Confidence 44555555 479999999999998887776654 48888888765444344454345554
No 141
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.85 E-value=0.0015 Score=50.72 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=43.2
Q ss_pred hhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 225 ELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 225 dL~~-~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++.+ ++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++..
T Consensus 13 ~~~~~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 13 ETLGQHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp HHHHHCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred HHhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 3344 445555554 89999999999988887766653 4888888866544434455434555544443
No 142
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.82 E-value=0.002 Score=52.27 Aligned_cols=64 Identities=6% Similarity=0.028 Sum_probs=42.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
++++||.| -..||+.|+.....|.++..++.. +.++.|-.+......+.|.-..+|--++...+
T Consensus 31 ~k~vlv~F-~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 94 (116)
T 3qfa_C 31 DKLVVVDF-SATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTFQFFKKG 94 (116)
T ss_dssp TSCEEEEE-ECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEEESSS
T ss_pred CCEEEEEE-ECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEEEEEeCC
Confidence 45555555 467999999999999888777754 88888887655443455543555654444433
No 143
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.81 E-value=0.0021 Score=53.49 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=48.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
++++||.|+ ..||+.|+.....|.++..++.. ++.++.|-.+......+.|.-..+|--++.|.+.+.
T Consensus 38 ~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 38 DKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp SSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE
Confidence 456666665 68999999999999887766653 488888887655443455544567777888777654
No 144
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.80 E-value=0.0023 Score=49.67 Aligned_cols=61 Identities=15% Similarity=0.067 Sum_probs=40.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
++++||.| -..|||.|+.....|.+...++. .++.++.|..+......+.|.-..+|--++
T Consensus 20 ~~~~vv~f-~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (106)
T 1xwb_A 20 GKLVVLDF-FATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECEDIAMEYNISSMPTFVF 80 (106)
T ss_dssp TSEEEEEE-ECTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCEEEEEE-ECCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchHHHHHHcCCCcccEEEE
Confidence 44555554 56899999999999988776665 468888888765544344454345554333
No 145
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.80 E-value=0.0014 Score=51.63 Aligned_cols=58 Identities=10% Similarity=0.037 Sum_probs=41.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 288 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f 288 (399)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|-
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccE
Confidence 567776666 58999999999999887777654 78999998766544345554345554
No 146
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.80 E-value=0.0013 Score=53.49 Aligned_cols=67 Identities=9% Similarity=0.059 Sum_probs=43.0
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
+.++.+.++.+|++|-..|||.|+.....|.++..++.. +.++.|-.+......+.|.-..+|.-++
T Consensus 23 ~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 89 (114)
T 2oe3_A 23 FRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPTFVL 89 (114)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred HHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccEEEE
Confidence 344445444455555589999999999998887666643 8888888765443344454345554443
No 147
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.76 E-value=0.002 Score=50.11 Aligned_cols=70 Identities=10% Similarity=0.060 Sum_probs=45.2
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 225 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 225 dL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
++..+++.+|++|-..|||.|+.....|.+...++.. .+.++.|..+......+.|.-..+|.-++...+
T Consensus 16 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 85 (109)
T 3tco_A 16 EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIFVNG 85 (109)
T ss_dssp HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEEcCC
Confidence 3344344445555589999999999998887776654 478888877655443455544556655554333
No 148
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.74 E-value=0.0024 Score=51.90 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=46.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a---lGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
.++.+|++|-..||+.|+.....|.++..++.. .++.++.|-.+......+.|.-..+|--++.|.++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGE 94 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCC
Confidence 344455555578999999999999888777763 45788888765543334555445677667777765
No 149
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.72 E-value=0.0017 Score=51.25 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=43.0
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
+.++.++++.+|+.|-..||+.|+.....|.++..++. ++.++.|-.+......+.|.-..+|--++.+.++.
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKE 83 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEE
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeE
Confidence 34445555556666667899999999988888766663 67888887655433234443345565555554443
No 150
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.67 E-value=0.0023 Score=52.04 Aligned_cols=67 Identities=9% Similarity=0.079 Sum_probs=47.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
++++||.| -..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|--++.|.+..
T Consensus 35 ~~~~lv~f-~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 35 DGLWLVEF-YAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp SSCEEEEE-ECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred CCeEEEEE-ECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 44555555 468999999999988887766654 37888887765544345554466777788888765
No 151
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.63 E-value=0.0034 Score=51.50 Aligned_cols=69 Identities=14% Similarity=0.226 Sum_probs=46.5
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
+++++||.|+ ..||+.|+.....|.++..++.. ++.++.|..+......+.|.-..+|--++.+.++.+
T Consensus 41 ~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 41 KNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 4555555555 78999999999999888877763 588888887655443444543556655555544433
No 152
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.62 E-value=0.0046 Score=48.26 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=40.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|--++.
T Consensus 19 ~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 19 SVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred CCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 456665555 69999999999999887766654 488888886654433444543455543333
No 153
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.60 E-value=0.00035 Score=54.00 Aligned_cols=43 Identities=16% Similarity=0.260 Sum_probs=31.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCC
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY 273 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~ 273 (399)
++++||.|+ ..|||+|+.....|.+...++.. ++.++.|..+.
T Consensus 19 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 19 DKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 455555555 89999999999988887777654 46777666543
No 154
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.56 E-value=0.0039 Score=48.90 Aligned_cols=67 Identities=12% Similarity=0.225 Sum_probs=44.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
+++++||.|+ ..||+.|+.....|.+...++.. .+.++.|-.+......+.|.-..+|--++...++
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 87 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGE 87 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTE
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEEEECCE
Confidence 3456666665 68999999999888887766653 4888888876654434445434556555554443
No 155
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.55 E-value=0.0041 Score=49.82 Aligned_cols=57 Identities=11% Similarity=0.089 Sum_probs=39.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 288 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f 288 (399)
+++++||.|+ ..|||.|+.....|.++..++ ++.++.|..+......+.|.-..+|-
T Consensus 32 ~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt 88 (117)
T 2xc2_A 32 KNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPT 88 (117)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccce
Confidence 3456666655 589999999999998877666 78999888765544344454345554
No 156
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.55 E-value=0.004 Score=48.99 Aligned_cols=64 Identities=9% Similarity=0.168 Sum_probs=41.5
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
+..+|++|-..|||+|+.....|.+...++. ++.++.|..+......+.|.-..+|.-++...+
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 89 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDG 89 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEEEEEETT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEEEEEeCC
Confidence 4445555556899999999988887766654 688888887654443455543455544444333
No 157
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.54 E-value=0.0049 Score=48.18 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=40.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
+.++.+|++|-..|||.|+.....|.+...++.. .+.++.|..+......+.|.-..+|--++.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 3444444555579999999999998887666643 478888876544333444543455544444
No 158
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.50 E-value=0.0054 Score=48.94 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=42.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|--++.+
T Consensus 30 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 92 (121)
T 2i1u_A 30 NKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLILFK 92 (121)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEEEE
Confidence 456665555 58999999999999887766644 5888888876544434445434555444444
No 159
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.35 E-value=0.0029 Score=51.64 Aligned_cols=68 Identities=6% Similarity=0.056 Sum_probs=43.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-GV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
++++||. |-..||+.|+.....|.++..++... ++.++.|-.+......+.|.-..+|--++.|.+..
T Consensus 25 ~~~vlv~-f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 93 (133)
T 2dj3_A 25 KKDVLIE-FYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDK 93 (133)
T ss_dssp TSEEEEE-ECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCT
T ss_pred CCcEEEE-EECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCc
Confidence 4455555 45789999999999998887777642 46666665443322122343356676677787654
No 160
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.33 E-value=0.0064 Score=54.39 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=49.6
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alG--V~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
.++..+++.+++.|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|--++.+.+
T Consensus 26 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 99 (241)
T 3idv_A 26 DNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKG 99 (241)
T ss_dssp HHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCC
Confidence 3445555555555567899999999999999988888766 88888877655444455554556655554443
No 161
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.33 E-value=0.0069 Score=47.62 Aligned_cols=62 Identities=11% Similarity=0.006 Sum_probs=40.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++++||.| -..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|--++..
T Consensus 21 ~~~v~v~f-~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 1gh2_A 21 SRLAVVKF-TMRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQCQGTAATNNISATPTFQFFR 82 (107)
T ss_dssp TSCEEEEE-ECSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE
T ss_pred CCEEEEEE-ECCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccCHHHHHhcCCCcccEEEEEE
Confidence 45555554 5689999999998888776666 36888888776544334445434555444443
No 162
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.29 E-value=0.0069 Score=49.15 Aligned_cols=67 Identities=12% Similarity=0.014 Sum_probs=45.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
.+++++ ++| +.|-..||+.|+.....|.++..++...++.++.|-.+......+.|.-..+|--++.
T Consensus 18 ~~~~~~-~vl-v~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 18 RELLEG-DWM-IEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp HHHTSS-EEE-EEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred HHHhCC-CEE-EEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEE
Confidence 344443 555 4555689999999999998887777766899999976655443445543455655554
No 163
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.25 E-value=0.0049 Score=52.47 Aligned_cols=65 Identities=8% Similarity=0.024 Sum_probs=45.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
++++||.|+ ..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|.-++.|.++
T Consensus 32 ~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 96 (153)
T 2wz9_A 32 KSLLVVHFW-APWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQ 96 (153)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTE
T ss_pred CCeEEEEEE-CCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCE
Confidence 456666655 789999999998888776655 36899998876554434455445677777777443
No 164
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.23 E-value=0.00074 Score=55.18 Aligned_cols=75 Identities=7% Similarity=0.023 Sum_probs=43.0
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCCh--hhHHhhhcCCCCCceeEe
Q 015842 218 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEYI--ESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 218 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L---~e~~pef~alGV~LVaIspE~~--e~~ik~F~~~~l~f~VLs 292 (399)
.+.+.+.. .+++++||.|+ ..|||+|+.....| .++...+.. ++.++.|-.+.. ....+.|.-..+|.-++.
T Consensus 9 ~~~~~~~~-~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (130)
T 2lst_A 9 PEALALAQ-AHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFL 85 (130)
Confidence 33444443 24556666655 88999999988777 554444433 466666654321 111233333556777788
Q ss_pred ccc
Q 015842 293 DQG 295 (399)
Q Consensus 293 Dp~ 295 (399)
|++
T Consensus 86 d~~ 88 (130)
T 2lst_A 86 VPK 88 (130)
Confidence 753
No 165
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.17 E-value=0.0012 Score=53.47 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=39.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
++++||.|+ ..|||.|+.....|.+...++. ++.++.|-.+......+.|.-..+|.-++
T Consensus 36 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 95 (130)
T 1wmj_A 36 GKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMPTFLF 95 (130)
T ss_dssp TCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSCCCCB
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccceEEE
Confidence 556666655 7999999999888887766664 68888887665443344454344554333
No 166
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.17 E-value=0.011 Score=47.20 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=43.4
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
..+.+++++||.|+ ..|||.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.-++...+
T Consensus 14 ~~~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 14 AHFEGLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp HHHTTCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred HHHHcCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 44444556665555 6899999999988887766654 678888876544333344543455655554333
No 167
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.17 E-value=0.0057 Score=48.91 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=31.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc----CCeEEEEec
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL----GIQLFAVLH 271 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al----GV~LVaIsp 271 (399)
+++++||.|| ..||+.|+.....|.++..++... ++.++.|-.
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~ 70 (121)
T 2djj_A 24 DTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDA 70 (121)
T ss_dssp TTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEET
T ss_pred CCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEEC
Confidence 4556666666 579999999999998887777652 566666654
No 168
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.14 E-value=0.045 Score=44.32 Aligned_cols=85 Identities=11% Similarity=0.060 Sum_probs=51.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCCCccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGKLL 308 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~r~~ 308 (399)
++++||.| -..||+.|+.....+.+...++. ++.++.|- .|....+.+.||+..
T Consensus 20 ~k~vvv~F-~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd---------------------~d~~~~l~~~~~V~~-- 73 (105)
T 3zzx_A 20 NKLVVIDF-YATWCGPCKMIAPKLEELSQSMS--DVVFLKVD---------------------VDECEDIAQDNQIAC-- 73 (105)
T ss_dssp TSEEEEEE-ECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEE---------------------TTTCHHHHHHTTCCB--
T ss_pred CCEEEEEE-ECCCCCCccCCCcchhhhhhccC--CeEEEEEe---------------------cccCHHHHHHcCCCe--
Confidence 34455555 56899999988887776544332 23333222 244556777777641
Q ss_pred ccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 015842 309 KDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 383 (399)
Q Consensus 309 r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l 383 (399)
+| ||++-++| .+...+.+. +.++|.+.+++.
T Consensus 74 ------------------------------------~P-T~~~~~~G-~~v~~~~G~------~~~~l~~~i~k~ 104 (105)
T 3zzx_A 74 ------------------------------------MP-TFLFMKNG-QKLDSLSGA------NYDKLLELVEKN 104 (105)
T ss_dssp ------------------------------------SS-EEEEEETT-EEEEEEESC------CHHHHHHHHHHH
T ss_pred ------------------------------------ec-EEEEEECC-EEEEEEeCc------CHHHHHHHHHhc
Confidence 35 55555675 777777663 567888777653
No 169
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.13 E-value=0.0025 Score=50.31 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=43.1
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 225 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 225 dL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al--GV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
++.++++.+|++|-..|||.|+.....|.+...++... ++.++.|-.+......+.|.-..+|--++...+
T Consensus 19 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 91 (120)
T 1mek_A 19 EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNG 91 (120)
T ss_dssp HHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESS
T ss_pred HHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCC
Confidence 34444445555556789999999999998877777654 466666654433222344543455555544443
No 170
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.08 E-value=0.0097 Score=49.85 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=45.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
.++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|--++.+.++.
T Consensus 54 ~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 121 (148)
T 3p2a_A 54 DDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKM 121 (148)
T ss_dssp CSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred cCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeE
Confidence 3455665555 88999999999999888777654 48888887766554445554455665555554443
No 171
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.05 E-value=0.0071 Score=50.10 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=41.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
+.++.+|++|-..||+.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4455566666688999999999988887766654 478888876544332344433455554444
No 172
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.03 E-value=0.014 Score=50.13 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=48.3
Q ss_pred chhhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 223 ALELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 223 LsdL~~-~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
+.++.+ ++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++...++
T Consensus 57 f~~~~~~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~ 129 (155)
T 2ppt_A 57 LARAERDDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGR 129 (155)
T ss_dssp HHHHTTCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTE
T ss_pred HHHHHhCCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCe
Confidence 444443 457777776 88999999999999888777764 4888888876544434445435566555544333
No 173
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.00 E-value=0.0073 Score=50.03 Aligned_cols=61 Identities=11% Similarity=0.000 Sum_probs=39.1
Q ss_pred hhccC-CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 015842 225 ELWRE-SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 288 (399)
Q Consensus 225 dL~~~-~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f 288 (399)
++++. +++||.|| ..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|-
T Consensus 32 ~~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~d~~~~l~~~~~v~~~Pt 93 (125)
T 1r26_A 32 NIMSEDILTVAWFT-AVWCGPCKTIERPMEKIAYEF--PTVKFAKVDADNNSEIVSKCRVLQLPT 93 (125)
T ss_dssp HHHHSSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred HHHccCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHC--CCCEEEEEECCCCHHHHHHcCCCcccE
Confidence 33344 45565555 789999999999988876666 368888887665433233343234443
No 174
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.94 E-value=0.012 Score=48.05 Aligned_cols=42 Identities=7% Similarity=0.003 Sum_probs=30.9
Q ss_pred CCCEEEEeecCC-------CCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 229 ESPAVLLCIRRP-------GCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 229 ~~pvVLvFyRg~-------gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
++++||.|+ .. |||.|+.....|.++..++.. ++.++.|-.+
T Consensus 24 ~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 24 GKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp TSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred CCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 455555555 55 999999999999887776643 6778777663
No 175
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.93 E-value=0.012 Score=49.01 Aligned_cols=59 Identities=7% Similarity=0.054 Sum_probs=38.8
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 231 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 231 pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
+.||+.|-..||+.|+.....|.++..++ ++.++.|-.+......+.|.-..+|.-++.
T Consensus 41 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 41 SSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEEEEE
Confidence 34555555689999999998888876655 577877776554433344543455655544
No 176
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.92 E-value=0.036 Score=49.75 Aligned_cols=42 Identities=14% Similarity=0.049 Sum_probs=30.8
Q ss_pred cceEEEEecCCCcEEEEE--e-cCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 345 KGGLFIVGRGRSGIAYQF--I-ERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 345 LGGtFVId~gGg~I~yah--~-d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
.|.+++++++| ++.|.. . ..+..+.+...++|+.+..+-.++
T Consensus 105 ~Pt~v~l~~dG-~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~~~ 149 (173)
T 3ira_A 105 WPLNIIMTPGK-KPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQ 149 (173)
T ss_dssp SSEEEEECTTS-CEEEEESSCCSSCBTTBCCHHHHHHHHHHHHHHS
T ss_pred CcceeeECCCC-CceeeeeeCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 58899999996 788873 2 334557788899998887765444
No 177
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.90 E-value=0.0069 Score=53.69 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=45.1
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhc---CCCCCceeEeccchHH
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFW---PRYWGGVVVYDQGMEF 298 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~---~~~l~f~VLsDp~r~l 298 (399)
++++|+.|--.|||.|+.++-.|.++..+.. ++.++.|..+........|. -..+|--++.|.+.++
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 4555555678899999999999988765442 57888887544333345565 2456666888887443
No 178
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.82 E-value=0.0066 Score=52.17 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=26.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCC
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEY 273 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L---~e~~pef~alGV~LVaIspE~ 273 (399)
+++++|| .|-..||+.|+.....+ .++...++. ++.+|.|..+.
T Consensus 46 ~gk~vlv-~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~ 92 (172)
T 3f9u_A 46 HNKPVML-DFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN 92 (172)
T ss_dssp TTCCEEE-EEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC
T ss_pred cCCeEEE-EEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc
Confidence 3455554 55577999999864333 222223333 67888887544
No 179
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=95.80 E-value=0.015 Score=48.28 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=41.7
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
+.+++||. |-..|||.|+.....|.++..++.. ++.++.|-.+......+.|.-..+|.-++..
T Consensus 49 ~~~~vvv~-f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 112 (140)
T 1v98_A 49 GAPLTLVD-FFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLFR 112 (140)
T ss_dssp CCCEEEEE-EECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cCCCEEEE-EECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEEe
Confidence 33455555 4578999999999999887777654 4888888766544334445434556444443
No 180
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.69 E-value=0.014 Score=52.79 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=46.0
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
+++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++.+.++.
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 96 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEV 96 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEE
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeE
Confidence 3456666665 78999999999999888777754 38888888765544344554356665555554443
No 181
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.61 E-value=0.0062 Score=50.49 Aligned_cols=68 Identities=9% Similarity=0.016 Sum_probs=44.5
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCC------CCCceeEeccchHHH
Q 015842 231 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPR------YWGGVVVYDQGMEFF 299 (399)
Q Consensus 231 pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~------~l~f~VLsDp~r~lY 299 (399)
|+||.| -..||+.|+.....|.++..++...++.++.|-.+......+.|.-. .+|--++...++.+.
T Consensus 28 ~vlv~f-~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~ 101 (137)
T 2dj0_A 28 TWIVEF-FANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAM 101 (137)
T ss_dssp CEEEEE-CCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEE
T ss_pred EEEEEE-ECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEE
Confidence 555555 56899999999999988877776557888888765544334444433 555445554444433
No 182
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=95.48 E-value=0.035 Score=45.12 Aligned_cols=67 Identities=9% Similarity=-0.099 Sum_probs=42.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh----cCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA----LGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a----lGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
++++| +.|-..||+.|+.....+.++..++.. .++.++.|-.+......+.|.-..+|--++.+.+.
T Consensus 33 ~~~vl-v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 33 EKDVF-VLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp TCEEE-EEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSC
T ss_pred CCCEE-EEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCC
Confidence 34555 445588999999999988887665542 34677777766544434445434556555555554
No 183
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.17 E-value=0.039 Score=47.12 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=45.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
.+..||+.|-..||+.|+.+...|.++..++... +.++.|-.+......+.|.-..+|.-++...++.+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEE
Confidence 3445555566889999999999998887777542 77888876555443445543566655555555555
No 184
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=95.11 E-value=0.027 Score=49.27 Aligned_cols=74 Identities=9% Similarity=0.044 Sum_probs=45.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEec--CChhhHHhhhcCCCCCceeEecc-chHHHHHhC
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLH--EYIESEVKDFWPRYWGGVVVYDQ-GMEFFKALG 303 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-GV~LVaIsp--E~~e~~ik~F~~~~l~f~VLsDp-~r~lYkaLG 303 (399)
+++|++|.|+ -.||+.|+.....+.+. +++.+. +..+|.|-- +..+. ...|.-.++|--++.|+ ++.+++..|
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m~p~~~~~-~~~~~~~~~~fv~V~vD~e~~~~-~~~~~v~~~PT~~f~~~~G~~v~~~~G 119 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQALKKVFAQN-EEIQEMAQNKFIMLNLMHETTDK-NLSPDGQYVPRIMFVDPSLTVRADIAG 119 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHHHHHHHHC-HHHHHHHHHTCEEEEESSCCSCG-GGCTTCCCSSEEEEECTTSCBCTTCCC
T ss_pred cCCcEEEEEE-CCCCHhHHHHHHHHhcC-HHHHHHhhcCeEEEEecCCchhh-HhhcCCCCCCEEEEECCCCCEEEEEeC
Confidence 4677777776 89999999998888764 444322 223444433 22221 23343356787889995 455666556
Q ss_pred C
Q 015842 304 G 304 (399)
Q Consensus 304 l 304 (399)
.
T Consensus 120 ~ 120 (151)
T 3ph9_A 120 R 120 (151)
T ss_dssp S
T ss_pred C
Confidence 5
No 185
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.08 E-value=0.04 Score=50.21 Aligned_cols=67 Identities=19% Similarity=0.064 Sum_probs=45.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEec--CChhhHHhhhcCCCCCceeEecc
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLH--EYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a--lGV~LVaIsp--E~~e~~ik~F~~~~l~f~VLsDp 294 (399)
..+..+|+.|-..||+.|+.....+.++..++.. .++.++.|-. +......+.|.-..+|--++.++
T Consensus 28 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 28 GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECT
T ss_pred hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeC
Confidence 3334555555578999999999999988877765 4788888887 33333344444356676677776
No 186
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.01 E-value=0.031 Score=44.75 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=26.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
++++||.| -..|||+|+.....|.++..++ +.+++.|..
T Consensus 29 ~~~~~v~f-~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~ 67 (118)
T 1zma_A 29 KETATFFI-GRKTCPYCRKFAGTLSGVVAET---KAHIYFINS 67 (118)
T ss_dssp TCCEEEEE-ECTTCHHHHHHHHHHHHHHHHH---CCCCEEEET
T ss_pred CCeEEEEE-ECCCCccHHHHHHHHHHHHHhc---CCeEEEEEC
Confidence 34555555 5589999999998888766544 356666643
No 187
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=94.90 E-value=0.018 Score=42.84 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=36.4
Q ss_pred EEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 232 AVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 232 vVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
++|++|-..|||+|+.....|.++..++. .++.++.|-.+......+.|.-...|--++
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMENPQKAMEYGIMAVPTIVI 62 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSSCCTTTSTTTCCSSEEEE
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCCHHHHHHCCCcccCEEEE
Confidence 34455557999999999988887655554 267888887544332233333244554444
No 188
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=94.83 E-value=0.022 Score=42.42 Aligned_cols=57 Identities=11% Similarity=0.121 Sum_probs=37.1
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
|+.|-..|||+|+.....|.++..++.. ++.++.|-.+......+.|.-...|--++
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 61 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI 61 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE
Confidence 4445579999999999988877666543 68888887654333234443345565555
No 189
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=94.51 E-value=0.045 Score=46.34 Aligned_cols=73 Identities=12% Similarity=0.013 Sum_probs=45.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhC
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALG 303 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLG 303 (399)
++++||. |-..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|--++.+.++.+...+|
T Consensus 23 ~k~vlv~-F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g 95 (142)
T 1qgv_A 23 DRVVVIR-FGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLG 95 (142)
T ss_dssp SSEEEEE-EECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC
T ss_pred CCEEEEE-EECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecC
Confidence 4455554 5568999999999999887777643 47888886554332233343345565555565555543333
No 190
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=94.30 E-value=0.065 Score=54.12 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=49.8
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
+.++.+.+..+|+.|-..||+.|+.....+.++..++...++.++.|-.+......+.|.-..+|--++...+
T Consensus 24 f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 96 (504)
T 2b5e_A 24 FNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNS 96 (504)
T ss_dssp HHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCC
Confidence 3444555556666666799999999999999888778766899999987665544455543445544443333
No 191
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.27 E-value=0.053 Score=51.87 Aligned_cols=67 Identities=12% Similarity=0.163 Sum_probs=45.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCC--hhhHHhhhcCCCCCceeEeccchH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY--IESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~--~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
++++||.|| ..||+.|+.....|.++..++... +.++.|-.+. .....+.|.-..+|--++.+.+..
T Consensus 35 ~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~ 103 (298)
T 3ed3_A 35 NYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKI 103 (298)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccCHHHHHhCCCCccceEEEEECCce
Confidence 345565555 789999999999998887777543 8888888763 222244444355666666666653
No 192
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.23 E-value=0.13 Score=41.14 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=29.9
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 218 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 218 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
|..-.|.......++|++| -..|||+|+.....|.++.. ++.+.-|--+
T Consensus 4 ~~~~~l~~~~~~~~~v~~f-~~~~C~~C~~~~~~L~~l~~-----~i~~~~vdi~ 52 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLF-TKAPCPLCDEAKEVLQPYKD-----RFILQEVDIT 52 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEE-ECSSCHHHHHHHHHTSTTSS-----SSEEEEEETT
T ss_pred CcchhhhhccCCCCEEEEE-eCCCCcchHHHHHHHHHhhh-----CCeEEEEECC
Confidence 3444444444556666555 56899999877776665432 3666666544
No 193
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=94.22 E-value=0.087 Score=46.78 Aligned_cols=64 Identities=11% Similarity=-0.048 Sum_probs=41.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a---lGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
+++++|+.|-..|||+|+.....|.++..++.. .++.++.|-.+......+.|.-..+|--++.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 199 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQ 199 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEE
Confidence 467845555589999999999999887777763 3677877765543332344433455543333
No 194
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=94.19 E-value=0.048 Score=48.62 Aligned_cols=63 Identities=13% Similarity=0.050 Sum_probs=42.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
.++++||.|+ ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|--++.
T Consensus 113 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 175 (210)
T 3apq_A 113 SGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFIF 175 (210)
T ss_dssp HSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEEE
Confidence 4556665555 68999999999999887776654 488888877655443444543555654444
No 195
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=94.16 E-value=0.044 Score=48.88 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=45.6
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alG--V~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
.++..+++.+++.|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|--++.+.+
T Consensus 141 ~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 214 (241)
T 3idv_A 141 DEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG 214 (241)
T ss_dssp HHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECC
Confidence 3444444455555568899999998888888877777654 77888876554433444443455544454444
No 196
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=93.82 E-value=0.091 Score=52.51 Aligned_cols=67 Identities=7% Similarity=0.018 Sum_probs=42.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeEeccchH
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 297 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-GV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~ 297 (399)
++++||.| -..||+.|+.....|.++...+... ++.++.|-.+..+ ....|.-..+|--++.+.+..
T Consensus 370 ~k~vlv~f-~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~-~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 370 NKDVLIEF-YAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND-VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp TCEEEEEE-ECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSC-CCTTCCCCSSSEEEEECTTCT
T ss_pred CCcEEEEE-ecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchh-hHhhCCCcccCEEEEEeCCCe
Confidence 34555554 5899999999999998887777654 5666666544321 123343356666677777665
No 197
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.78 E-value=0.054 Score=50.17 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=42.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 293 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsD 293 (399)
++++||.|| ..||+.|+.....|.+...++.. .+.++.|-.+......+.|.-..+|--++..
T Consensus 26 ~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 88 (287)
T 3qou_A 26 TTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTVYLFQ 88 (287)
T ss_dssp TSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEEEEEE
T ss_pred CCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeEEEEE
Confidence 456666665 78999999998888877766653 4888888876544434555435556444443
No 198
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.44 E-value=0.062 Score=49.30 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=40.8
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
+++||.|| ..||+.|+.....|.++..++. ++.++.|-.+.+ .....|.-..+|--++...+..+
T Consensus 121 k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~-~l~~~~~i~~~PTl~~~~~G~~v 185 (217)
T 2trc_P 121 TTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNT-GAGDRFSSDVLPTLLVYKGGELI 185 (217)
T ss_dssp CEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHH-TCSTTSCGGGCSEEEEEETTEEE
T ss_pred cEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcH-HHHHHCCCCCCCEEEEEECCEEE
Confidence 46666666 7999999999998888776663 688888876521 11233332445544444444433
No 199
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=92.64 E-value=0.18 Score=52.11 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=45.6
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhc-C------CeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-G------IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-G------V~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
+|+||.|| -.||+.|+...-.+.++..++... | +.++.|-.+......+.|.-..+|--++.+++.
T Consensus 43 k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 43 CPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESS
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCC
Confidence 56776666 689999999999998887777533 3 888888876554434555435566556665543
No 200
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=92.39 E-value=0.067 Score=48.43 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=28.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
+++++|+.|=-+|||||+.....|.+.. +.|++++.+-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~----~~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYN----ALGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHH----hCCcEEEEEE
Confidence 4566777777999999999888877643 2378888763
No 201
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=92.36 E-value=0.21 Score=44.52 Aligned_cols=61 Identities=11% Similarity=0.024 Sum_probs=39.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
++|++|+.|-..||++|+.....+.++..++ -++.++.|-.+......+.|.-..+|--++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 195 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--DYITSKVIDASENQDLAEQFQVVGVPKIVI 195 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 4677666566799999999998887765555 267777776544333344443345555455
No 202
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=92.12 E-value=0.13 Score=44.06 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=33.5
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 218 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 218 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
+..+.+.+ .++|++|+.|=-+|||+|+.....|.+...+.. +++++.+
T Consensus 12 ~~~~~~G~--~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~--~v~~~~~ 59 (175)
T 3gyk_A 12 PNAPVLGN--PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP--NVRLVYR 59 (175)
T ss_dssp TTSCEEEC--TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEE
T ss_pred CCCCCcCC--CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC--CEEEEEE
Confidence 44444555 457888899999999999999988877654432 2455544
No 203
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.08 E-value=0.28 Score=45.21 Aligned_cols=62 Identities=11% Similarity=-0.104 Sum_probs=39.0
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a---lGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
++++|+.|-..|||+|+.....|.++..++.. .++.++.|-........+.|.-..+|--++
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i 202 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI 202 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE
Confidence 56666656669999999999999887666632 467777775543333234443344453344
No 204
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=91.96 E-value=0.39 Score=38.74 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=26.9
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
+.++.+..+++ +|..+ .|||+|+....-|.+ +|+....|-
T Consensus 8 ~~~~i~~~~vv-vy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vd 51 (109)
T 1wik_A 8 LKVLTNKASVM-LFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFD 51 (109)
T ss_dssp HHHHHTTSSEE-EEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEE
T ss_pred HHHHhccCCEE-EEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEE
Confidence 45667777744 57776 999999877666654 356655554
No 205
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=91.95 E-value=0.041 Score=44.68 Aligned_cols=38 Identities=11% Similarity=-0.009 Sum_probs=25.6
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 220 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
.+++++... +++||.|| -.|||.|+.....|.++..++
T Consensus 4 ~~~la~~~~-k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 4 AVGLAAHLR-QIGGTMYG-AYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHHHHHH-HHTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred hhHHHHhcC-CCEEEEEE-CCCCHHHHHHHHHHHHHHHhC
Confidence 445555433 34555554 689999999988888776554
No 206
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=91.81 E-value=0.21 Score=50.35 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=31.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEec
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLH 271 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al--GV~LVaIsp 271 (399)
.++++||.|| ..||+.|+.....+.++..++... ++.++.|-.
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~ 419 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDH 419 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEG
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecC
Confidence 3567777766 699999999999998887777633 455555543
No 207
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=91.68 E-value=0.15 Score=49.86 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=40.7
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-----cCCeEEEEecCChhhHHhhhcCCCCC
Q 015842 225 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-----LGIQLFAVLHEYIESEVKDFWPRYWG 287 (399)
Q Consensus 225 dL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a-----lGV~LVaIspE~~e~~ik~F~~~~l~ 287 (399)
++++++..||+.|-..||+.|+..+..+.++..++++ .++.++.|-.+......+.|.-..+|
T Consensus 17 ~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 17 EILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 3444444555555679999999999999888777753 23778888766544334444323344
No 208
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=91.55 E-value=0.095 Score=41.71 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=21.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhcc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKK 256 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~ 256 (399)
.++.+..++|+ |-..|||+|+.....|.+..
T Consensus 14 ~~~~~~~~vv~--f~a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 14 KELASSAPVVV--FSKTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp HHHHTSSSEEE--EECTTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEE--EECCCChhHHHHHHHHHHcC
Confidence 55566666554 45689999998877776653
No 209
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=91.52 E-value=0.18 Score=41.30 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=37.6
Q ss_pred cCCCEEEEeecCCCCc--------------chHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEe
Q 015842 228 RESPAVLLCIRRPGCI--------------MCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 292 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP--------------~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLs 292 (399)
+.++.||+.|-..||+ .|+.....+.++..++.. .+.++.|-.+......+.|.-..+|--++.
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 96 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 96 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTTGGGGTCCBSSEEEEE
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4444455555678999 999999999888777754 488888876654432344443455655554
No 210
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.37 E-value=0.27 Score=40.86 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=41.9
Q ss_pred EEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCC
Q 015842 232 AVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 304 (399)
Q Consensus 232 vVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl 304 (399)
.||+.|-..||+.|+.....|.++..++ .++.++.|-.+... +.|.-..+|--++.+.++.+.+..|.
T Consensus 32 ~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~ 99 (135)
T 2dbc_A 32 WVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGI 99 (135)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEEST
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeE
Confidence 4445555799999999998888766555 25777777654421 33433455655666655554443343
No 211
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=91.21 E-value=0.15 Score=46.05 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=28.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
+++++|+.|--+|||||+.....|.+ +.+.|++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~----~~~~~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKE----YNDLGITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHH----HHHTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHH----HHhCCcEEEEE
Confidence 46778888889999999988877766 33347888765
No 212
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=91.13 E-value=0.051 Score=43.18 Aligned_cols=53 Identities=21% Similarity=0.531 Sum_probs=46.2
Q ss_pred HHHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 36 ALEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
.-.+..||..-+|-||++.+++.|.+ +..|+.++..|| ..-|+.. ||-.|.+.
T Consensus 16 ~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL-~~lGI~~~GhRkkIl~ 70 (82)
T 2kso_A 16 HMTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDI-KRIGVRLPGHQKRIAY 70 (82)
T ss_dssp --CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHH-HHHHCCCTTHHHHHHH
T ss_pred cchHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHH-HHCCCCChhHHHHHHH
Confidence 34577899999999999999999999 999999999999 7899986 99877653
No 213
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=91.12 E-value=0.2 Score=42.99 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=34.9
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEe
Q 015842 220 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVL 270 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-GV~LVaIs 270 (399)
.+.+.. .+.|+.|+.|=.++||+|...-..+.+...++.+. .++++.+-
T Consensus 19 ~~~~G~--~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~ 68 (175)
T 1z6m_A 19 GLHIGE--SNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKL 68 (175)
T ss_dssp SEEESC--TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CcccCC--CCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEe
Confidence 344444 35788889999999999999988887766555323 47776653
No 214
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=90.99 E-value=0.043 Score=43.26 Aligned_cols=51 Identities=20% Similarity=0.392 Sum_probs=45.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhcccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
++..||+.-+|-||.+.+++.|. ++..|+.++..||. ..|+.. ||-.|.+.
T Consensus 13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~-~lGI~~~GhrkkIl~ 65 (82)
T 1b4f_A 13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDIL-RVGVTLAGHQKKILN 65 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHH-HcCCCCHHHHHHHHH
Confidence 56779999999999999999999 89999999999998 689986 99877653
No 215
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=90.80 E-value=0.6 Score=41.24 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=30.5
Q ss_pred CCCEEEEeecCC-CCcchHHHHHHHHhccchhhhcCCeEEEEecCC
Q 015842 229 ESPAVLLCIRRP-GCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY 273 (399)
Q Consensus 229 ~~pvVLvFyRg~-gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~ 273 (399)
++|++|++|--. ||++|+.....|.++... .-.+.++.|-.+.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~ 64 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDT 64 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTS
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCC
Confidence 467877777777 999999888877775432 2247777777665
No 216
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=90.70 E-value=0.13 Score=45.60 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=25.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L---~e~~pef~alGV~LVaI 269 (399)
..|+||.|+ -+|||+|+.....| .++..++.. .++++-+
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~ 55 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKY 55 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEE
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEE
Confidence 368899888 89999999877654 222222222 5676665
No 217
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=90.57 E-value=0.18 Score=44.09 Aligned_cols=40 Identities=15% Similarity=0.041 Sum_probs=27.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
+++++|+.|-.+|||+|+.....|.++..++.. .+.++-+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQV 63 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEE
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEE
Confidence 456677777799999999988877766544433 4555444
No 218
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=90.54 E-value=0.096 Score=44.82 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=36.0
Q ss_pred chhhccC-CCEEEEeecCC-CCcchHHHHHHHHhccchhhhcCCe--EEEEecCChhhHHhhhcCCCCCceeEeccchHH
Q 015842 223 ALELWRE-SPAVLLCIRRP-GCIMCRAEAHQLYAKKPIFDALGIQ--LFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 298 (399)
Q Consensus 223 LsdL~~~-~pvVLvFyRg~-gCP~Cr~el~~L~e~~pef~alGV~--LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~l 298 (399)
+.++... +.+||.|+-.+ ||+.|+...-.|.++..++ -++. ++.|-.+......+.|.-..+|--++.-.++.+
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v 104 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLR 104 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC---
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEE
Confidence 3344443 45666555333 4999999988888776666 2477 888865543332344543556655555444444
Q ss_pred HH
Q 015842 299 FK 300 (399)
Q Consensus 299 Yk 300 (399)
.+
T Consensus 105 ~~ 106 (142)
T 2es7_A 105 GA 106 (142)
T ss_dssp -C
T ss_pred EE
Confidence 43
No 219
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=90.54 E-value=0.093 Score=46.05 Aligned_cols=55 Identities=24% Similarity=0.471 Sum_probs=50.2
Q ss_pred hHHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhcccc-ccccccccc
Q 015842 35 DALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKR-GHMARFKDR 90 (399)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (399)
+.-.+..||+.=||=||++.+...|.++..|..++..|| .+.|++. ||-.+++..
T Consensus 9 ~~~~V~~WL~~lgL~~Y~~~F~~~g~d~~~l~~lt~~DL-~~lGIt~~gHrkkil~a 64 (149)
T 3sei_A 9 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDL-TAIGVTKPGHRKKIAAE 64 (149)
T ss_dssp HHHHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHH-HHTTCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCcHHHHHHHHHcCCCHHHHccCCHHHH-HHcCCCCHHHHHHHHHH
Confidence 456789999999999999999999999999999999999 6999987 999998763
No 220
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=90.37 E-value=0.16 Score=40.64 Aligned_cols=31 Identities=13% Similarity=0.175 Sum_probs=20.9
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHh
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYA 254 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e 254 (399)
+.++.+..+++| |+.+ .|||+|+....-|.+
T Consensus 10 ~~~~i~~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~ 44 (105)
T 2yan_A 10 LKVLTNKASVML-FMKGNKQEAKCGFSKQILEILNS 44 (105)
T ss_dssp HHHHHTSSSEEE-EESBCSSSBCTTHHHHHHHHHHH
T ss_pred HHHHhccCCEEE-EEecCCCCCCCccHHHHHHHHHH
Confidence 456666667554 6663 899999876655544
No 221
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=90.35 E-value=0.35 Score=48.26 Aligned_cols=64 Identities=11% Similarity=0.029 Sum_probs=43.3
Q ss_pred chhhccCC---CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 015842 223 ALELWRES---PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 287 (399)
Q Consensus 223 LsdL~~~~---pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~ 287 (399)
+.+++.+. ..+|+.|-..||+.|+.....+.++..++... +.++.|-.+......+.|.-..+|
T Consensus 11 f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~P 77 (481)
T 3f8u_A 11 FESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSGYP 77 (481)
T ss_dssp HHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCEES
T ss_pred HHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCCCC
Confidence 34444444 55666666899999999999998888777665 888888876654434444323334
No 222
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.20 E-value=0.22 Score=47.95 Aligned_cols=64 Identities=11% Similarity=-0.004 Sum_probs=37.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHH-------HHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQ-------LYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 287 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~-------L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~ 287 (399)
+.++..+++.+|+.|--.||+ |+..+-. +.++..+++..++.++.|-.+......+.|.-..+|
T Consensus 21 f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 91 (350)
T 1sji_A 21 FKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEG 91 (350)
T ss_dssp HHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTT
T ss_pred HHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccc
Confidence 344455545555555589999 9766444 445555555557888888776554434445423334
No 223
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=90.04 E-value=0.63 Score=33.80 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=32.5
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeE
Q 015842 233 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 291 (399)
Q Consensus 233 VLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VL 291 (399)
.|.||- .|||.|+.....|.++..++.. .+.++.|- ..+ ..+.|.-...|--++
T Consensus 3 ~v~f~a-~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~--~~~-~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 3 KIQIYG-TGCANCQMLEKNAREAVKELGI-DAEFEKIK--EMD-QILEAGLTALPGLAV 56 (77)
T ss_dssp EEEEEC-SSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC--SHH-HHHHHTCSSSSCEEE
T ss_pred EEEEEc-CCChhHHHHHHHHHHHHHHcCC-ceEEEEec--CHH-HHHHCCCCcCCEEEE
Confidence 456666 5999999999888776655432 35555554 222 234443345555455
No 224
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=89.92 E-value=0.077 Score=41.90 Aligned_cols=51 Identities=24% Similarity=0.441 Sum_probs=46.4
Q ss_pred HHhhhccchhhhhhhHHHHHcC-CChHHHhccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASG-KSLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
++..||+.-+|-||++.+++.| .++..|+.++..||.. .|+. .||-.|.+.
T Consensus 17 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~-lGI~~~GhrkkIl~ 69 (83)
T 2qkq_A 17 SVGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLR-IGVTLAGHQKKILA 69 (83)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH-HTCCCHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhCCHHHHHH-CCCCCHHHHHHHHH
Confidence 5678999999999999999999 8999999999999965 8998 899888764
No 225
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=89.87 E-value=0.087 Score=41.52 Aligned_cols=51 Identities=25% Similarity=0.480 Sum_probs=45.6
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
.+..||+.-+|-||++.+++.|.. +..|+.++..||. +-|+.. ||-.|.+.
T Consensus 9 ~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~-~lGI~~~GhrkkIl~ 61 (81)
T 1ucv_A 9 TVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVR-ALGITLMGHQKKILG 61 (81)
T ss_dssp BHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHH-hCCCCChhHHHHHHH
Confidence 456799999999999999999999 9999999999995 799987 99887763
No 226
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=89.85 E-value=0.094 Score=42.35 Aligned_cols=55 Identities=20% Similarity=0.312 Sum_probs=48.7
Q ss_pred hHHHHhhhccch-hhhhhhHHHHHcCCChHHHhccCcccchhhhcccccccccccc
Q 015842 35 DALEIRSYLHDR-ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFKD 89 (399)
Q Consensus 35 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
..=++..||..- |+-+|++.++...++-.-|+.++..||-+..|+|-||.-+.+.
T Consensus 18 s~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~ 73 (89)
T 1kw4_A 18 SVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVA 73 (89)
T ss_dssp CHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHH
Confidence 455778899887 9999999999999999999999999998899999999776543
No 227
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=89.56 E-value=0.097 Score=40.63 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=46.3
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhccc-ccccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
-++..||..-||=+|++.++..+.+-..|+.++..|| .+.|++ -||-.+.+.
T Consensus 8 ~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL-~~lGI~~~Ghr~kIl~ 60 (76)
T 2f3n_A 8 FDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDF-VELGVTRVGHRENIER 60 (76)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGCCHHHH-HHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHcCCCHHHHccCCHHHH-HHcCCCChhHHHHHHH
Confidence 3567799999999999999999999999999999999 799998 799877654
No 228
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=89.43 E-value=0.27 Score=46.35 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=43.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccchHHHHHhCC
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 304 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl 304 (399)
+++|||.|| ..||+.|+.....|.++..++. ++.++.|-.+..+ ....|.-..+|--++.+.+..+.+-.|+
T Consensus 133 ~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~~~-l~~~~~I~~~PTll~~~~G~~v~~~vG~ 204 (245)
T 1a0r_P 133 ITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASNTG-AGDRFSSDVLPTLLVYKGGELLSNFISV 204 (245)
T ss_dssp TCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHHHC-CTTSSCTTTCSEEEEEETTEEEEEETTG
T ss_pred CCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCcHH-HHHHCCCCCCCEEEEEECCEEEEEEeCC
Confidence 345555555 7999999999998888766663 5888888754321 1233433455544454544444433343
No 229
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.33 E-value=0.13 Score=41.17 Aligned_cols=51 Identities=22% Similarity=0.532 Sum_probs=45.6
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
++..||+.-+|-||++.+++.|.+ +..|+.++..||- +-|+.. ||-.|.+.
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~-~lGI~~~GhRkkIl~ 66 (88)
T 2e8n_A 14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVK-RIGVRLPGHQKRIAY 66 (88)
T ss_dssp SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHH-HTTCCSHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCChhHHHHHHH
Confidence 567799999999999999999999 9999999999995 689987 99887763
No 230
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=88.97 E-value=0.11 Score=40.58 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhccccccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFK 88 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (399)
-.+..||..-||-+|++.++..+.++..|..++..|| .+.|+.-||--+-+
T Consensus 3 ~~v~~wL~~lgL~~Y~~~F~~~~id~e~l~~lt~~DL-~~lGI~~G~RkkIl 53 (74)
T 3k1r_B 3 SPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDL-RSISVPLGPREKIL 53 (74)
T ss_dssp CHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHH-HHTTCCHHHHHHHH
T ss_pred chHHHHHHHCCCHHHHHHHHHcCcCHHHHhHCCHHHH-HHcCCCcchHHHHH
Confidence 3578899999999999999999999999999999999 57888888865543
No 231
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=88.90 E-value=0.11 Score=41.33 Aligned_cols=51 Identities=25% Similarity=0.476 Sum_probs=45.3
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-ccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFK 88 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (399)
-.+..||..-+|=||.+.+++.|.+ +..|..++..|| .+.|... ||-.|.+
T Consensus 24 ~~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL-~~lGIt~~GHRkkIL 76 (82)
T 3hil_A 24 RTVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDL-TQMGITLPGHQKRIL 76 (82)
T ss_dssp SSHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTCCHHHH-HHTTCCCHHHHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHHcCCChHHHHhcCCHHHH-HHCCCCCHHHHHHHH
Confidence 3578899999999999999999998 999999999999 7889886 9977654
No 232
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=88.80 E-value=0.073 Score=43.17 Aligned_cols=51 Identities=24% Similarity=0.506 Sum_probs=45.4
Q ss_pred HHHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhcccc-ccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 88 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (399)
-++..||+.-+|-||.+.+++.|. ++..|+.++..||- +-|+.. ||-.|.+
T Consensus 27 ~~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~-~lGI~~~GhrkkIl 79 (94)
T 1b0x_A 27 VSVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLA-RIGITAITHQNKIL 79 (94)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHH-HHTCCCHHHHHHHH
T ss_pred hHHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHH-HCCCCChhHHHHHH
Confidence 356779999999999999999999 89999999999995 689887 9987765
No 233
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=88.64 E-value=0.32 Score=42.41 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=24.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
++|++|+.|=.+|||+|+.....|.++..+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKL 54 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhC
Confidence 5778888888999999999988776654443
No 234
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=88.62 E-value=0.65 Score=48.19 Aligned_cols=67 Identities=12% Similarity=-0.045 Sum_probs=45.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEecCC--hhhHHhhhcCCCCCceeEecc
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLHEY--IESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~a--lGV~LVaIspE~--~e~~ik~F~~~~l~f~VLsDp 294 (399)
+.+..||+.|--.||+.|+...-.|.++..++.. .++.++.|-.+. .....+.|.-..+|--++.++
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcC
Confidence 4444555555678999999999999998888875 368888888743 222244454356666677765
No 235
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=88.16 E-value=0.13 Score=45.09 Aligned_cols=51 Identities=20% Similarity=0.372 Sum_probs=44.9
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
.+..||.+=||=||.+.+.+.|.+ +..|..++..|| .+-|+. -||-.|-+.
T Consensus 81 ~v~~WL~~igL~qY~~~F~~~g~d~~~~l~~lt~~dL-~~lGI~~~gHr~kIl~ 133 (149)
T 3sei_A 81 NLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDL-QEIGITKLGHQKKLML 133 (149)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred cHHHHHHHcCchhhHHHHHHCCCchHHHHhhCCHHHH-HHCCCCCHHHHHHHHH
Confidence 477899999999999999999998 999999999999 789996 689877553
No 236
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=87.89 E-value=0.76 Score=48.91 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=43.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
++++||.|+ -.||+.|+.....|.++..+++. ++.++.|-.+......+.|.-..+|--++...++
T Consensus 675 ~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 740 (780)
T 3apo_A 675 KTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYER 740 (780)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEET
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCC
Confidence 456777666 79999999999888887766654 5888888765544333444434555544443333
No 237
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=87.89 E-value=0.16 Score=39.83 Aligned_cols=53 Identities=34% Similarity=0.523 Sum_probs=45.9
Q ss_pred HHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhcc-cccccccccc
Q 015842 36 ALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGM-KRGHMARFKD 89 (399)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (399)
.-++..||..-||=+|++.++..+.+-.+|+.++..||- +.|+ +-||.-+.+.
T Consensus 12 ~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL~-~lGI~~~ghr~kIl~ 65 (81)
T 3bq7_A 12 TEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLK-DLGVTKVGHMKRILC 65 (81)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHcCCCHHHHCcCCHHHHh-HcCCCCHHHHHHHHH
Confidence 346778999999999999999999999999999999995 5999 5688777653
No 238
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=87.88 E-value=0.4 Score=44.20 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
+.|++|+.|--+|||||+.....|.+... +-+++++.+
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~---~g~v~v~~~ 133 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVD---SGKVQLRTL 133 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHH---TTSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHh---CCcEEEEEE
Confidence 56888888999999999998888776432 224666544
No 239
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=87.55 E-value=0.13 Score=39.36 Aligned_cols=50 Identities=30% Similarity=0.381 Sum_probs=44.6
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 88 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (399)
++..||..-||=+|++.+...+.+-..|+.++..|| .+.|++ -||..+.+
T Consensus 11 ~V~~WL~~~gl~~y~~~F~~~~i~g~~Ll~l~~~dL-~~lGI~~~g~r~kil 61 (74)
T 2gle_A 11 QVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDGNKL-KALGMTSSQDRALVK 61 (74)
T ss_dssp GGHHHHHHTTTHHHHHHHTTTTCCHHHHHTCCHHHH-HTTTCCCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCHHHHhhCCHHHH-HHcCCCCHHHHHHHH
Confidence 467899999999999999999999999999999998 579998 78877765
No 240
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=87.53 E-value=0.2 Score=41.27 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=16.4
Q ss_pred chhhccCCCEEEEeecCCCCcchHHH
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAE 248 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~e 248 (399)
+.++++..+++ +|-..|||+|+..
T Consensus 18 ~~~~i~~~~Vv--vf~~~~Cp~C~~a 41 (118)
T 3c1r_A 18 VKDLIAENEIF--VASKTYCPYCHAA 41 (118)
T ss_dssp HHHHHHHSSEE--EEECSSCHHHHHH
T ss_pred HHHHHccCcEE--EEEcCCCcCHHHH
Confidence 45566655544 3556999999976
No 241
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=87.48 E-value=0.42 Score=35.90 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=21.3
Q ss_pred EeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 235 LCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 235 vFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
.+|-..|||+|+.....|.++..+ .|+.+..+
T Consensus 5 ~~f~~~~C~~C~~~~~~l~~~~~~---~~~~~~~~ 36 (80)
T 2k8s_A 5 AIFYHAGCPVCVSAEQAVANAIDP---SKYTVEIV 36 (80)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCT---TTEEEEEE
T ss_pred EEEeCCCCCchHHHHHHHHHHHHh---cCCeEEEE
Confidence 344468999999998888776543 35554333
No 242
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=87.41 E-value=0.49 Score=35.30 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=23.3
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
|++|-..|||+|+.....|.++..+. .|+.++.|-
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vd 37 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVD 37 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEe
Confidence 34556789999998877777654322 466666553
No 243
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=87.38 E-value=0.52 Score=45.01 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=39.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeEeccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~al-GV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~ 295 (399)
.++.+++.|--.||+.|+.....|.++..+++.. ++.++.|-..... .+.|.-..+|--++.+.+
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSS
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECC
Confidence 3444455555899999999999998887777654 4555555433322 233432455555666443
No 244
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=87.36 E-value=0.93 Score=33.56 Aligned_cols=32 Identities=16% Similarity=0.373 Sum_probs=21.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
|++|-..|||+|+.....|. +.|+.+..|--+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~-------~~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAME-------NRGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHH-------HTTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHH-------HCCCCeEEEECC
Confidence 34566789999998665554 356776666543
No 245
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=85.72 E-value=0.5 Score=36.98 Aligned_cols=31 Identities=19% Similarity=0.344 Sum_probs=20.0
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..+++ + |-..|||+|+.....|.+.
T Consensus 5 ~~~~i~~~~v~-~-f~~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 5 VNSKIQPGKVV-V-FIKPTCPFCRKTQELLSQL 35 (105)
T ss_dssp HHHHCCTTCEE-E-EECSSCHHHHHHHHHHHHS
T ss_pred HHhhcccCCEE-E-EEcCCCHhHHHHHHHHHHc
Confidence 34555655533 3 4469999999876666553
No 246
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=85.68 E-value=0.58 Score=40.48 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=27.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
++++.|+.|=.++||+|......|.++..+... .+.++.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLV 63 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEe
Confidence 456777778899999999988888765444321 3444433
No 247
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.55 E-value=0.2 Score=40.94 Aligned_cols=52 Identities=23% Similarity=0.468 Sum_probs=45.8
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
-++..||+.-+|-||++.+++.|.+ +..|+.++..||- +.|+.. ||-.|.+.
T Consensus 23 ~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~-~lGI~~~GhRkkIl~ 76 (99)
T 2eao_A 23 TTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLL-RIGITLAGHQKKILN 76 (99)
T ss_dssp CBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHH-HCCCCChhHHHHHHH
Confidence 3677799999999999999999999 9999999999996 589986 99877653
No 248
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=85.54 E-value=0.45 Score=40.08 Aligned_cols=27 Identities=22% Similarity=0.577 Sum_probs=18.2
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccc
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKP 257 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~p 257 (399)
+++||.|+ -.||++|+..-..+...++
T Consensus 19 ~~~LV~F~-A~wC~~Ck~~~~~i~~~~~ 45 (116)
T 3dml_A 19 ELRLLMFE-QPGCLYCARWDAEIAPQYP 45 (116)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHTTTTGG
T ss_pred CCEEEEEE-CCCCHHHHHHHHHHHhhHH
Confidence 45666665 5699999988765554433
No 249
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=85.35 E-value=1.5 Score=31.65 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=21.2
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
|.+|-..|||+|+.....|.+ .|+....|--+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEECC
Confidence 345667899999987666654 46666555433
No 250
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=85.30 E-value=0.23 Score=40.15 Aligned_cols=51 Identities=22% Similarity=0.471 Sum_probs=44.8
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
.+..||..-+|-||.+.++..|.+ +..|..++..|| .+.|... ||-.|.+.
T Consensus 27 ~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL-~~lGIt~~GHRkkIL~ 79 (90)
T 3h8m_A 27 SVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDV-MSLGITLVGHQKKIMS 79 (90)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHH-HHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHH-HHCCCCCHHHHHHHHH
Confidence 567899999999999999999999 999999999999 4689886 99777653
No 251
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=84.86 E-value=0.51 Score=39.77 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=27.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKP 257 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~p 257 (399)
+.++++..+.||+|+.-.|||.|+.....|.+...
T Consensus 17 f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~ 51 (112)
T 3iv4_A 17 FEQVIEENKYVFVLKHSETCPISANAYDQFNKFLY 51 (112)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhc
Confidence 55666656678889999999999998888877543
No 252
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=84.45 E-value=0.36 Score=37.44 Aligned_cols=51 Identities=24% Similarity=0.384 Sum_probs=43.6
Q ss_pred HHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhhccc-cccccccc
Q 015842 37 LEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 88 (399)
Q Consensus 37 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (399)
-++..||..- ||-+|++.+...+++-..|+.++..|| .+.|++ -||-.+.+
T Consensus 10 ~~V~~WL~~l~~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL-~~lGI~~~ghr~~il 63 (80)
T 3bs5_B 10 SQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQEL-EDLGVSRIGHQELIL 63 (80)
T ss_dssp HHHHHHHHTSCGGGGGGHHHHHHHTCCHHHHHTCCHHHH-HHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHcCCCHHHHHHCCHHHH-HHcCCCCHHHHHHHH
Confidence 4567788766 799999999999999999999999999 679995 59977654
No 253
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=84.35 E-value=1.5 Score=46.55 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=45.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEecc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 294 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp 294 (399)
+.++ .+++++|.|| -.||+.|+..+..|.++..+++. .+.++.|-.+......+.|.-..+|--++.+.
T Consensus 450 ~~~~-~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 518 (780)
T 3apo_A 450 FPAS-DKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQ 518 (780)
T ss_dssp SCTT-CCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred HHHc-CCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcC
Confidence 3444 5667777665 47999999999999988877764 58888888765444344444344554444443
No 254
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=84.32 E-value=0.83 Score=40.39 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=24.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~ 260 (399)
.++++|+.|--+|||+|+.....|.+...++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~ 54 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFK 54 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 35778888889999999998887776655443
No 255
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.31 E-value=1.3 Score=37.97 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=21.9
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..+++ +|..+ .|||||+.-..-|.+.
T Consensus 28 v~~~i~~~~Vv-vy~ks~~~~~~Cp~C~~ak~~L~~~ 63 (135)
T 2wci_A 28 IQRQIAENPIL-LYMKGSPKLPSCGFSAQAVQALAAC 63 (135)
T ss_dssp HHHHHHHCSEE-EEESBCSSSBSSHHHHHHHHHHHTT
T ss_pred HHHHhccCCEE-EEEEecCCCCCCccHHHHHHHHHHc
Confidence 45566666654 56666 8999999776666553
No 256
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=84.14 E-value=1 Score=37.28 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=26.3
Q ss_pred EEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 015842 232 AVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 271 (399)
Q Consensus 232 vVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIsp 271 (399)
.||+.|-..||+.|+.....|.++..+.. +++++-|-.
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~ 62 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIV 62 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEG
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEh
Confidence 44455557999999999888877655543 467666653
No 257
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=83.94 E-value=1 Score=38.82 Aligned_cols=36 Identities=11% Similarity=0.391 Sum_probs=27.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
.+++++|+.|=.++||||+.....|.++ -.++++.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 5678888889999999999988887654 23566654
No 258
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=83.87 E-value=0.45 Score=38.77 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=21.3
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..+++| |-..|||+|+.-..-|.+.
T Consensus 10 ~~~~i~~~~v~v--y~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 10 LVGLIERSRVVI--FSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp HHHHHHHCSEEE--EECTTCHHHHHHHHHHHHT
T ss_pred HHHHhccCCEEE--EEcCCCCcHHHHHHHHHHc
Confidence 456666667554 5568999998776666553
No 259
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=83.86 E-value=0.44 Score=38.28 Aligned_cols=30 Identities=13% Similarity=0.167 Sum_probs=19.8
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e 254 (399)
+.++.+..+++ +|-..|||+|+....-|.+
T Consensus 12 ~~~~i~~~~v~--vy~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 12 IRKTVTENTVV--IYSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp HHHHHHHSSEE--EEECTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCEE--EEECCCChhHHHHHHHHHH
Confidence 35556666743 3556999999876665554
No 260
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=83.10 E-value=2 Score=37.34 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=38.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHh---ccchhhhcCCeEEEEecCChhh--HHhhhcCCCCCceeEeccc
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFDALGIQLFAVLHEYIES--EVKDFWPRYWGGVVVYDQG 295 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e---~~pef~alGV~LVaIspE~~e~--~ik~F~~~~l~f~VLsDp~ 295 (399)
++|++|. |-..||+.|+..-++.-. ....+++ +.-+|-|-.+..+. ..+.|.-..+|+-++.|++
T Consensus 42 ~K~vlvd-~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~ 111 (153)
T 2dlx_A 42 NKWLMIN-IQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR 111 (153)
T ss_dssp TCEEEEE-EECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTT
T ss_pred CCeEEEE-EECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCC
Confidence 4555555 455799999988776633 2222322 44555554555432 1233434678888999997
No 261
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=83.04 E-value=0.65 Score=38.76 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=23.4
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..++ ++|-.+ +|||||+.-.+-|.+.
T Consensus 9 v~~~i~~~~V-vvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 9 IEDAIESAPV-VLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp HHHHHHSCSE-EEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred HHHHhccCCE-EEEEeccCCCCCCccHHHHHHHHHHc
Confidence 4667777774 467777 6999998877776653
No 262
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=82.58 E-value=0.5 Score=41.73 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=22.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
++++||.|| -+|||+|+.....|.+...++
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh
Confidence 467777777 799999998876666655555
No 263
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=82.56 E-value=2.8 Score=37.66 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=24.8
Q ss_pred CCEEEEeec------CCCCcchHHHHHHHHhccchhh
Q 015842 230 SPAVLLCIR------RPGCIMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 230 ~pvVLvFyR------g~gCP~Cr~el~~L~e~~pef~ 260 (399)
.++||.|.- +.||+.|+...-.|.++..++.
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 467777776 3699999999998888877775
No 264
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.49 E-value=0.36 Score=40.34 Aligned_cols=31 Identities=13% Similarity=0.276 Sum_probs=20.8
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~ 255 (399)
+.+++...+++| |-..|||+|+.....|.+.
T Consensus 20 ~~~~i~~~~vvv--f~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 20 IQETISDNCVVI--FSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp HHHHHHHSSEEE--EECSSCSHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEE--EEcCCChHHHHHHHHHHHc
Confidence 455566666554 5569999998866666543
No 265
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=82.40 E-value=0.83 Score=37.07 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=23.3
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..+++ +|..+ +|||||+.-..-|.+.
T Consensus 11 v~~~i~~~~Vv-vy~k~t~~~p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 11 LEKLVNSEKVV-LFMKGTRDFPMCGFSNTVVQILKNL 46 (109)
T ss_dssp HHHHHTSSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHccCCEE-EEEecCCCCCCChhHHHHHHHHHHc
Confidence 46667777755 67776 6999998877777664
No 266
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=82.22 E-value=0.42 Score=41.63 Aligned_cols=51 Identities=22% Similarity=0.327 Sum_probs=44.8
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhcc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGM-KRGHMARFK 88 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 88 (399)
.+..||.+-+|=||++.+.+.|. ++..|..++..||-...|+ +-||..|-+
T Consensus 90 ~v~~WL~~i~L~qY~~~F~~~g~~~~~~l~~lt~~dLl~~lGI~~~gHrkrIl 142 (148)
T 2kiv_A 90 SVAEWLDSIELGDYTKAFLINGYTSMDLLKKIAEVELINVLKINLIGHRKRIL 142 (148)
T ss_dssp SHHHHHHTTTCCTHHHHHHHHTCCSHHHHTSCCHHHHHHHTCCCCHHHHHHHH
T ss_pred hHHHHHHHCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHhCCCCChhHHHHHH
Confidence 56679999999999999999998 6888999999999899999 578987754
No 267
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=81.91 E-value=2.1 Score=31.51 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=14.5
Q ss_pred EeecCCCCcchHHHHHHHHh
Q 015842 235 LCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 235 vFyRg~gCP~Cr~el~~L~e 254 (399)
.+|-..|||+|+.....|.+
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~ 23 (82)
T 1fov_A 4 EIYTKETCPYCHRAKALLSS 23 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHH
Confidence 34557899999977666654
No 268
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=81.89 E-value=0.48 Score=37.98 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=49.0
Q ss_pred hHHHHhhhccchhh--hhhhHHHHHcCCChHHHhccCcccch-hhhccc-ccccccccc
Q 015842 35 DALEIRSYLHDRAL--MQYADIFEASGKSLPELLNLSTGDLS-SQFGMK-RGHMARFKD 89 (399)
Q Consensus 35 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~ 89 (399)
..=++..||+..|+ =+|++.+....++-.-|+.+...||. ..+|+. -||.-+++.
T Consensus 21 t~~dV~~WL~~~gl~~~~Y~~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~ 79 (91)
T 1v85_A 21 TTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILT 79 (91)
T ss_dssp CHHHHHHHHHHHCGGGHHHHHHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHH
Confidence 45578899999999 99999999999999999999999999 689987 499888864
No 269
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=81.61 E-value=0.91 Score=37.20 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=23.0
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..|+| +|.+| .|||||+.-..-|.+.
T Consensus 9 v~~~i~~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 9 LKKLTHAAPCM-LFMKGTPQEPRCGFSKQMVEILHKH 44 (111)
T ss_dssp HHHHHTSSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHhcCCEE-EEEecCCCCCcchhHHHHHHHHHHc
Confidence 46777887766 55553 8999998877766653
No 270
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=81.55 E-value=0.44 Score=41.39 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=22.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccch
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 258 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pe 258 (399)
+++++|+.|=-+|||+|......|.++..+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~ 50 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKA 50 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHH
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHH
Confidence 456777777899999999877777654433
No 271
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=81.46 E-value=0.51 Score=37.85 Aligned_cols=52 Identities=21% Similarity=0.514 Sum_probs=45.3
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-cccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
-.+..||..-+|=||.+.++..|.. +..|..++..||- +.|... ||-.|.+.
T Consensus 22 ~~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~-~LGIt~~GHRkkIL~ 75 (86)
T 3kka_C 22 RTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIK-RIGVRLPGHQKRIAY 75 (86)
T ss_dssp -CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred hHHHHHHHhCCcHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCCHHHHHHHHH
Confidence 3578899999999999999999998 9999999999995 688887 99877664
No 272
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=81.18 E-value=0.54 Score=38.73 Aligned_cols=54 Identities=31% Similarity=0.456 Sum_probs=47.5
Q ss_pred HHHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhcccc-ccccccccc
Q 015842 36 ALEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKDR 90 (399)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (399)
.-++..||..-+|=||++.+++.|.+ +..|+.++..||- +.|+.. ||-.|.+..
T Consensus 26 ~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLk-eLGIt~~GhRkkIL~a 81 (100)
T 2kg5_A 26 DLDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELK-QLGISATGHRKRILRL 81 (100)
T ss_dssp TCBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHHH
T ss_pred cChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHH-HCCCCChhHHHHHHHH
Confidence 34688999999999999999999999 9999999999996 589885 998887743
No 273
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.55 E-value=2.4 Score=43.25 Aligned_cols=57 Identities=11% Similarity=-0.009 Sum_probs=36.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 287 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~ 287 (399)
++++.|.+|--.|||+|+.....|.+...+.. ++.++.|-.+......+.|.-...|
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~~i~svP 172 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITERNVMGVP 172 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHHhCCCccC
Confidence 46777888889999999998888776543332 5777766554433334444323444
No 274
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=80.13 E-value=0.47 Score=40.88 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=20.6
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e 254 (399)
+.+++++.+++| |-..|||+|+.....|.+
T Consensus 42 ~~~~i~~~~Vvv--f~~~~Cp~C~~~k~~L~~ 71 (146)
T 2ht9_A 42 IQETISDNCVVI--FSKTSCSYCTMAKKLFHD 71 (146)
T ss_dssp HHHHHHHCSEEE--EECTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEE--EECCCChhHHHHHHHHHH
Confidence 456666666554 556999999886665554
No 275
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=79.67 E-value=1.2 Score=36.73 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=23.5
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 233 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 233 VLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
+|+.|-..|||+|+....-|.++..+ .|+.+.-|=
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vD 65 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVIN 65 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEE
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEE
Confidence 35556678999999887777665433 356665554
No 276
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=79.62 E-value=3 Score=31.67 Aligned_cols=21 Identities=29% Similarity=0.618 Sum_probs=15.2
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 015842 234 LLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e 254 (399)
|.+|-..|||+|+.....|.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~ 28 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR 28 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 445667999999976666554
No 277
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=79.54 E-value=1.4 Score=36.75 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=45.1
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--s--pE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-..+||+|+....-|.+ .|+....| . +.+.+ +++.+.. ...+..-+.......|+.+|+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIMTSPLSRD-ELLKILSYTENGTEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHH-HHHHHHHHCSSTHHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecccCCCcHH-HHHHHHhhcCCCHHHhhcCCcHHHHHcCCC
Confidence 678999999999987776654 45555444 2 23333 3566554 4566777888999999999986
No 278
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=79.48 E-value=0.95 Score=34.49 Aligned_cols=21 Identities=24% Similarity=0.591 Sum_probs=15.5
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 015842 234 LLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e 254 (399)
|++|-..|||+|+.....|.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~ 28 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDK 28 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 455677999999976665554
No 279
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=79.19 E-value=4.3 Score=34.04 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=43.6
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ec--CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--sp--E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-..+||+|+....-|.+ .|+....| .. ...+ +++.+.. .+.+..-+.......|+.+|+.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~-el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSID-EIKQILRMTEDGTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHH-HHHHHHHTCSSCGGGTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHH-HHHHHHHHcCCCHHHhhcCCchHHHhcCcc
Confidence 567889999999887766655 46665443 22 2223 3555543 3556777888999999999985
No 280
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=77.85 E-value=2 Score=36.35 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=24.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
..|+|+-|+ -+.||+|...-..+.++..+... ++.++-+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 467888877 79999998876655554433322 3444433
No 281
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=77.70 E-value=1.1 Score=40.19 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=24.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L---~e~~pef~alGV~LVaI 269 (399)
.+++||-||= +|||+|+...-.| .++...+.. ++.++-+
T Consensus 113 ~~~~vveFf~-~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~ 154 (197)
T 1un2_A 113 GAPQVLEFFS-FFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKY 154 (197)
T ss_dssp TCCSEEEEEC-TTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEE
T ss_pred CCCEEEEEEC-CCChhHHHhCcccccHHHHHHHCCC-CCEEEEe
Confidence 3577777776 9999999887554 443333322 4554443
No 282
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.55 E-value=0.9 Score=35.47 Aligned_cols=51 Identities=24% Similarity=0.384 Sum_probs=43.2
Q ss_pred HHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhhccc-cccccccc
Q 015842 37 LEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 88 (399)
Q Consensus 37 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (399)
-++..||..- +|=+|++.+...+++-..|+.++..|| .+.|++ -||-.+.+
T Consensus 14 ~~V~~WL~~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL-~~LGI~~~ghr~~il 67 (83)
T 2ean_A 14 SQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQEL-EDLGVSRIGHQELIL 67 (83)
T ss_dssp THHHHHHTTSCGGGTTTHHHHHHHTCCHHHHTTCCHHHH-HHHTCCCSHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHCCCCHHHHhhCCHHHH-HHhCCCCHHHHHHHH
Confidence 3567788865 688999999999999999999999999 679995 58877664
No 283
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=77.50 E-value=1.4 Score=33.00 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=15.4
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 015842 234 LLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e 254 (399)
|.+|-..|||+|+....-|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHH
Confidence 566778899999876555543
No 284
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=77.49 E-value=0.5 Score=38.05 Aligned_cols=52 Identities=25% Similarity=0.436 Sum_probs=45.4
Q ss_pred HHHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhccc-ccccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
.++..||+.-+|-||++.+++.|. ++..|..++..||. +-|.. -||-.|.+.
T Consensus 16 ~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~-~lGI~~~GHrkkIl~ 69 (91)
T 1x40_A 16 VDIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQ-KIGISPTGHRRRILK 69 (91)
T ss_dssp CBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHH-HCCCCCHhHHHHHHH
Confidence 357889999999999999999998 68999999999995 58886 699888764
No 285
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=77.45 E-value=0.92 Score=37.55 Aligned_cols=54 Identities=13% Similarity=0.278 Sum_probs=46.2
Q ss_pred hHHHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhhccc-ccccccccc
Q 015842 35 DALEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 35 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
..=+.-.||... |+-+|++.+...+++=..|+.++..+| .+.|++ -||.-+++.
T Consensus 27 t~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL-k~LGI~~~GhR~kIl~ 83 (106)
T 3bs5_A 27 TVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSL-QRMGVTDNRDREAIWR 83 (106)
T ss_dssp CHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHH-HhcCCCCHHHHHHHHH
Confidence 345778899877 999999999999999999999999999 579996 488777653
No 286
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=76.97 E-value=3.3 Score=40.18 Aligned_cols=59 Identities=12% Similarity=0.042 Sum_probs=34.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHH------HHHHhccchhhhcCCeEEEEecCChhhHHhhhc
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEA------HQLYAKKPIFDALGIQLFAVLHEYIESEVKDFW 282 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el------~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~ 282 (399)
.++++..+.||+.|--+||+.|+..- -.+.++..+++..++.++.|=++.-....+.|.
T Consensus 24 ~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 88 (367)
T 3us3_A 24 KNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLG 88 (367)
T ss_dssp HHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHT
T ss_pred HHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcC
Confidence 44444445555555579999884432 134455555555578888887765544344554
No 287
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=76.93 E-value=23 Score=37.37 Aligned_cols=127 Identities=12% Similarity=0.051 Sum_probs=70.1
Q ss_pred CCCceechhhcc--CCCEEEEeecCCCCcchHHHHHHHHhccc-------hhhh------cCCeEEEEecCChhh-HHhh
Q 015842 217 KTPPMKALELWR--ESPAVLLCIRRPGCIMCRAEAHQLYAKKP-------IFDA------LGIQLFAVLHEYIES-EVKD 280 (399)
Q Consensus 217 ~G~~VsLsdL~~--~~pvVLvFyRg~gCP~Cr~el~~L~e~~p-------ef~a------lGV~LVaIspE~~e~-~ik~ 280 (399)
+|.++.+.+++. .+.+||+|--..-.+-+...+.++.+... .+.. .-+.++.|.+..... ++.+
T Consensus 495 ~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 574 (665)
T 1pn0_A 495 EGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRIDVITIHSCHRDDIEMHD 574 (665)
T ss_dssp TTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSEEEEEEESSCTTSCCGGG
T ss_pred CCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccceeEEEEEecCCCCccchhh
Confidence 588999999985 35566666433222334455555544321 1111 126777776543221 1122
Q ss_pred hcC----CCCCc-eeEecc------chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEE
Q 015842 281 FWP----RYWGG-VVVYDQ------GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLF 349 (399)
Q Consensus 281 F~~----~~l~f-~VLsDp------~r~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtF 349 (399)
+-+ ..+.+ .+|.|. +..+|+.||+.+ ..|+++
T Consensus 575 ~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~-------------------------------------~~g~~v 617 (665)
T 1pn0_A 575 FPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDE-------------------------------------TKGAVV 617 (665)
T ss_dssp SCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCT-------------------------------------TTCEEE
T ss_pred CCHHHcCcccchheEeecCcccccccccHHHHcCCCC-------------------------------------CCceEE
Confidence 211 01122 488883 455777776631 025889
Q ss_pred EEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 015842 350 IVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 350 VId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~~~ 387 (399)
||.||| -|.|...- .+.++|.+.+..+...+
T Consensus 618 lvRPD~-yV~~~~~~------~~~~~l~~~~~~~~~~~ 648 (665)
T 1pn0_A 618 VVRPDG-YTSLVTDL------EGTAEIDRYFSGILVEP 648 (665)
T ss_dssp EECTTS-BEEEEECT------TTHHHHHHHHHTTBCCC
T ss_pred EECCCC-cEEEEecc------ccHHHHHHHHHHHhcCc
Confidence 999996 78887542 24678888887764433
No 288
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=76.90 E-value=0.85 Score=36.77 Aligned_cols=54 Identities=20% Similarity=0.328 Sum_probs=45.9
Q ss_pred HHHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhhcccccccccccc
Q 015842 36 ALEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFKD 89 (399)
Q Consensus 36 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
.=+.-.||... |+-+||+.+....++=.-|+.++..||-+..|||-|++-+...
T Consensus 19 vedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~ 74 (89)
T 1pk1_B 19 IEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICN 74 (89)
T ss_dssp HHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHH
Confidence 34566788654 8889999999999999999999999999999999999876543
No 289
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=76.67 E-value=0.69 Score=38.88 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=18.1
Q ss_pred chhhccCCCEEEEeecCCCCcchHHH-HHHHH
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAE-AHQLY 253 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~e-l~~L~ 253 (399)
+.+++...+++ +|-..|||||+.. ..-|.
T Consensus 30 v~~~i~~~~Vv--vy~~~~Cp~C~~a~k~~L~ 59 (129)
T 3ctg_A 30 VKDLIGQKEVF--VAAKTYCPYCKATLSTLFQ 59 (129)
T ss_dssp HHHHHHHSSEE--EEECTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCCEE--EEECCCCCchHHHHHHHHH
Confidence 45555555633 3456999999976 44443
No 290
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=76.66 E-value=0.62 Score=37.40 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=42.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhcccc-ccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 88 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (399)
++..||..-+|=||++.+++.|. ++..|..++..||. +-|... ||-.|.+
T Consensus 28 ~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~lt~~DL~-~lGIt~~GHRkkIL 79 (86)
T 2k4p_A 28 GMSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLE-EAGVQDPAHKRLLL 79 (86)
T ss_dssp SSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTCCHHHHH-HTTCCCHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCCHHHHHHHH
Confidence 45669999999999999999998 69999999999995 688875 8877765
No 291
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=76.64 E-value=0.93 Score=34.84 Aligned_cols=51 Identities=14% Similarity=0.307 Sum_probs=43.5
Q ss_pred HHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
+.-.||... |+-+|++.+...+.+-..|+.++..+|. +.|++ -||..+++.
T Consensus 10 ~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~-~lGI~~~g~r~~il~ 63 (78)
T 3bs7_A 10 DVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQ-RMGVTDNRDREAIWR 63 (78)
T ss_dssp HHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHh-HcCCCCHHHHHHHHH
Confidence 456788885 8999999999999999999999999995 79986 588776653
No 292
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=76.52 E-value=4.3 Score=35.85 Aligned_cols=54 Identities=9% Similarity=-0.015 Sum_probs=30.1
Q ss_pred CCCEEEEeecC----CCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhc
Q 015842 229 ESPAVLLCIRR----PGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFW 282 (399)
Q Consensus 229 ~~pvVLvFyRg----~gCP~Cr~el~~L~e~~pef~a-lGV~LVaIspE~~e~~ik~F~ 282 (399)
++|++|.||-. +||+.|+..+..+.++..++.. -.++++.|-.+.-....+.|.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~ 78 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYG 78 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTT
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcC
Confidence 57888888844 4566666666666665433321 246666665544333233443
No 293
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=76.32 E-value=1.5 Score=36.62 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=25.3
Q ss_pred ceechhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 015842 220 PMKALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 255 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e~ 255 (399)
.-.+.++++..++| +|-+. +|||||+.-.+-|.+.
T Consensus 10 ~~~v~~~i~~~~Vv-vfsk~t~~~p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 10 AEQLDALVKKDKVV-VFLKGTPEQPQCGFSNAVVQILRLH 48 (118)
T ss_dssp HHHHHHHHHHSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCEE-EEEecCCCCCccHHHHHHHHHHHHc
Confidence 34567778887755 57776 6999998877766653
No 294
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.94 E-value=0.6 Score=36.43 Aligned_cols=51 Identities=24% Similarity=0.402 Sum_probs=43.3
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
++..||+.-+|=||.+.+++.|.+..+++ .++..||- +.|+. -||-.|.+.
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~dL~-~lGI~~~ghR~kIl~ 68 (80)
T 2eam_A 14 TVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLL-EIGILNSGHRQRILQ 68 (80)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTTHHH-HSSCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHH-HCCCCCHHHHHHHHH
Confidence 45679999999999999999999988876 89999995 68887 589877653
No 295
>2k6l_A Putative uncharacterized protein; xanthonomas axonopodis, RHH, structural proteomics, plasmid, hypothetical DNA binding protein; NMR {Xanthomonas axonopodis PV}
Probab=75.36 E-value=0.52 Score=34.69 Aligned_cols=19 Identities=26% Similarity=0.516 Sum_probs=16.8
Q ss_pred cchhhhccccccccccccc
Q 015842 72 DLSSQFGMKRGHMARFKDR 90 (399)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~ 90 (399)
-|+.+||||||-+++|+|.
T Consensus 21 ~l~~~~G~rKGdlSkfVEe 39 (51)
T 2k6l_A 21 FIAAQGGGRKGDLSRFIED 39 (51)
T ss_dssp HHHHHCSCCSSCHHHHHHH
T ss_pred HHHHhcCCccccHHHHHHH
Confidence 4788999999999999974
No 296
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=75.04 E-value=1.2 Score=35.14 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=15.8
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~ 255 (399)
|+.|-..||++|+....-|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQA 24 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCchHHHHHHHHHHH
Confidence 3455679999999776666554
No 297
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=74.42 E-value=1.6 Score=34.58 Aligned_cols=22 Identities=14% Similarity=0.375 Sum_probs=16.2
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~ 255 (399)
|.+|-..|||+|+....-|.+.
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHc
Confidence 3446778999999877766654
No 298
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=74.05 E-value=0.81 Score=39.75 Aligned_cols=52 Identities=23% Similarity=0.363 Sum_probs=46.2
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhhccc-ccccccccc
Q 015842 37 LEIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
-++..||.+-||=||++.+.+.|....+++ .++..||. ..|++ -||-.+++.
T Consensus 15 ~~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~lt~~DL~-~lGI~~~ghRkkil~ 70 (148)
T 2kiv_A 15 QTVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLL-EIGILNSGHRQRILQ 70 (148)
T ss_dssp CBHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCCCHHHHH-HHCCSSTTSHHHHHH
T ss_pred chHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccCCHHHHH-HCCCCCHHHHHHHHH
Confidence 356779999999999999999999998888 79999997 99998 599988874
No 299
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=73.87 E-value=2.2 Score=35.62 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=45.5
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCC
Q 015842 233 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 233 VLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--s--pE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
.|.+|-.++|++|+...+-|.+ .|+..-.| . |.+.+ ++..+.. .+++..-+.+.....|+.+|+.
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAAS-LIRNWLENSGLELKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHH-HHHHHHHHSCCCGGGGBCTTSHHHHHTTHH
T ss_pred eEEEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHH-HHHHHHHHcCCCHHHHhCCCCcchhhcCcc
Confidence 4678999999999987777654 45554444 3 23333 3566554 4566777889999999999985
No 300
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=73.75 E-value=2.8 Score=34.92 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=44.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCC-ceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWG-GVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--s--pE~~e~~ik~F~~-~~l~-f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-.++|++|+...+-|.+ .|+..-.| . |.+.+ +++.+.. .+++ ..-+.......|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~-eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 75 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVE-ELKRLYQQLGLNEVRAMMRCKEELYKELNLG 75 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHH-HHHHHHHHHTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHH-HHHHHHHHcCCccHHHHhcCCCchhhhcCcc
Confidence 578999999999988777765 35544333 2 33333 3666553 4555 556888899999999986
No 301
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=73.74 E-value=2.4 Score=35.43 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=43.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCC-CceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--s--pE~~e~~ik~F~~-~~l-~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-.++|++|+...+-|.+ .|+..-.| . |.+.+ +++.+.. .++ +..=+.......|+.+|+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLETPPSVD-KLKELLQQLGFSDARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTSCCCHH-HHHHHHHHTTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccCCCcHH-HHHHHHHhcCCcCHHHHhcCCChhhhhcCcc
Confidence 678999999999988877765 34443333 3 23333 3566553 344 4444888899999999986
No 302
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=73.05 E-value=1.7 Score=36.27 Aligned_cols=64 Identities=19% Similarity=0.315 Sum_probs=44.6
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEE--Ee--cCChhhHHhhhcC-CCCCceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFA--VL--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVa--Is--pE~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-.++|++|+...+-|.+ .|+..-. |. |.+.+ ++..+.. .+++..-+.......|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIVDDNPTVE-ELKAWIPLSGLPVKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTTCCCHH-HHHHHHHHHTSCGGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecccCcCCHH-HHHHHHHHcCCCHHHeEeCCCchhhhcCcc
Confidence 678999999999988777765 3544433 33 33333 3555553 4566777888999999999975
No 303
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=72.45 E-value=6.8 Score=30.23 Aligned_cols=30 Identities=17% Similarity=0.011 Sum_probs=17.5
Q ss_pred EeecCCCCcchH-----HHHHHHHhccchhhhcCCeEEEEe
Q 015842 235 LCIRRPGCIMCR-----AEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 235 vFyRg~gCP~Cr-----~el~~L~e~~pef~alGV~LVaIs 270 (399)
++|-..|||+|. ..+.++ |++.|+....|-
T Consensus 5 ~ly~~~~C~~c~~~~~~~~ak~~------L~~~~i~~~~~d 39 (93)
T 1t1v_A 5 RVYSTSVTGSREIKSQQSEVTRI------LDGKRIQYQLVD 39 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHH------HHHTTCCCEEEE
T ss_pred EEEEcCCCCCchhhHHHHHHHHH------HHHCCCceEEEE
Confidence 345578999994 334433 344566655443
No 304
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=72.12 E-value=2.3 Score=35.94 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=21.9
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~ 255 (399)
+.++.+..+++ +| -..|||||+.--+-|.+.
T Consensus 7 ~~~ii~~~~Vv-vy-sk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 7 YSLILDLSPII-IF-SKSTCSYSKGMKELLENE 37 (127)
T ss_dssp HHHHHTSCSEE-EE-ECTTCHHHHHHHHHHHHH
T ss_pred HHHHHccCCEE-EE-EcCCCccHHHHHHHHHHh
Confidence 56677777743 34 459999998877777763
No 305
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=72.09 E-value=2.8 Score=36.45 Aligned_cols=42 Identities=10% Similarity=-0.071 Sum_probs=28.3
Q ss_pred cCCCEEEEeecCCC--CcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 228 RESPAVLLCIRRPG--CIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 228 ~~~pvVLvFyRg~g--CP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
.++|+||.| -..| |+-|+..+--|.++..++....++++-|-
T Consensus 33 ~~~~vlVdF-~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVd 76 (140)
T 2qgv_A 33 QAPDGVVLL-SSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIAD 76 (140)
T ss_dssp TCSSEEEEE-CCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECC
T ss_pred CCCCEEEEE-eCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEE
Confidence 556777744 4667 99999998888887777643224554443
No 306
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.74 E-value=0.83 Score=37.38 Aligned_cols=51 Identities=24% Similarity=0.387 Sum_probs=44.9
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
.+..||..-+|=||++.+.+.|.. +..|..++..|| .+-|+. -||..|-+.
T Consensus 25 sV~eWL~~igL~qY~~~F~~~g~d~le~l~~lt~~DL-~~lGIt~~gHrkkIl~ 77 (97)
T 2dl0_A 25 SVSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCL-QEAGITEERHIRKLLS 77 (97)
T ss_dssp SHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhcCHHHH-HHCCCCCHHHHHHHHH
Confidence 466799999999999999999998 899999999999 478887 699988764
No 307
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=71.48 E-value=1.5 Score=33.33 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=15.8
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~ 255 (399)
|.+|-..|||+|+.....|.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 3456778999998866666553
No 308
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=71.17 E-value=2.2 Score=37.81 Aligned_cols=43 Identities=12% Similarity=0.182 Sum_probs=29.2
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 227 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 227 ~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
|.+.|+.|+.|=-+.||+|......+.+...+...-.+++|..
T Consensus 11 ~g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 11 WGHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp EECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred cCCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3478999999999999999987766655433321123555543
No 309
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=71.07 E-value=1.6 Score=34.91 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=16.4
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAK 255 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~ 255 (399)
|++|-..|||+|+....-|.+.
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHC
Confidence 3456788999998877776653
No 310
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=70.65 E-value=1.8 Score=37.22 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=44.2
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ec--CChhhHHhhhcC-CCCCceeEeccchHHHHHhCCCc
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGK 306 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--sp--E~~e~~ik~F~~-~~l~f~VLsDp~r~lYkaLGl~r 306 (399)
|.+|-..+|++|+...+-|.+ .|+..-.| .. .+.+ ++..+.. .+++..-+.......|+.+|+..
T Consensus 4 itiY~~p~C~~crkak~~L~~-------~gi~~~~idi~~~~~~~~-eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN-------SGTEPTIILYLENPPSRD-ELVKLIADMGISVRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECTTTSCCCHH-HHHHHHHHHTSCHHHHBCSSSHHHHHTTTTS
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCEEEEECCCCCccHH-HHHHHhcccCCCHHHhccCCchhHHhcCCcc
Confidence 568999999999987777655 44443333 32 2333 3555553 45676777789999999999863
No 311
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=70.34 E-value=2.2 Score=34.34 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=17.8
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 015842 224 LELWRESPAVLLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 224 sdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e 254 (399)
.++.+..+ |++ |-..|||+|+.....|.+
T Consensus 13 ~~~i~~~~-vv~-f~~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 13 QQRLANNK-VTI-FVKYTCPFCRNALDILNK 41 (114)
T ss_dssp HTTCCTTC-EEE-EECTTCHHHHHHHHHHTT
T ss_pred HHHhccCC-EEE-EEeCCChhHHHHHHHHHH
Confidence 44555444 333 456899999876655544
No 312
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=70.22 E-value=3.5 Score=35.50 Aligned_cols=41 Identities=7% Similarity=0.177 Sum_probs=27.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHH-hccchhh-hcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLY-AKKPIFD-ALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~-e~~pef~-alGV~LVaI 269 (399)
+.|+.|.+|--+-||+|......+. .+..++- .-.++++..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~ 52 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFV 52 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4678888999999999998877763 3333332 234777664
No 313
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=67.31 E-value=2.5 Score=33.76 Aligned_cols=20 Identities=20% Similarity=0.182 Sum_probs=13.8
Q ss_pred EEeecCCCCcchHHHHHHHH
Q 015842 234 LLCIRRPGCIMCRAEAHQLY 253 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~ 253 (399)
|..|=..|||||..--.-|.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~ 25 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALT 25 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHHH
Confidence 34566799999987554443
No 314
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=66.29 E-value=3.6 Score=33.96 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=40.8
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ecC--ChhhHHhhhcCCCCCceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LHE--YIESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--spE--~~e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-..+||+|+....-|.+ .|+....| ..+ +.+ .++++.. .....-+.......|+.+|+.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~-~l~~~~~-~~g~~~l~n~~~~~~k~l~~~ 73 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAE-TLDRFLK-TVPWEQLLNRAGTTFRKLPED 73 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHH-HHHHHHH-HSCGGGTBCSSSHHHHHSCHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHH-HHHHHHH-HcChHhhccCCchhhHhcCch
Confidence 567889999999987777665 35554443 222 222 2555443 123456678888999999875
No 315
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=64.44 E-value=2.2 Score=33.27 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=41.8
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhhcccc-ccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 88 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (399)
.+..||+.-+|=||++.+.+.|. ++..+..++..||. +-|+.. ||-.|.+
T Consensus 14 ~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~-~lGI~~~ghrkkil 65 (78)
T 1v38_A 14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLI-ELNIADPEDRARLL 65 (78)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHH-HTTTCCHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHH-HcCCCCHHHHHHHH
Confidence 45669999999999999999998 68889999999985 588874 8887765
No 316
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=64.22 E-value=13 Score=37.40 Aligned_cols=83 Identities=18% Similarity=0.130 Sum_probs=50.4
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeEeccch
Q 015842 217 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 296 (399)
Q Consensus 217 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~l~f~VLsDp~r 296 (399)
+|+.+++-||+..+-++|.+-.+ -.+.++. .+ ..++.|+.|-++.-.. . +.|+..
T Consensus 434 ~~~~~~~~dl~g~~f~ll~~~~~----~~~~~~~--~~---~~~~~~~~~~~~~~~~----------~------~~d~~~ 488 (535)
T 3ihg_A 434 HGERLSTVDLFGDGWTLLAGELG----ADWVAAA--EA---VSAELGVPVRAYRVGA----------G------LTDPES 488 (535)
T ss_dssp TTEEEEGGGGCSSSEEEEECTTC----HHHHHHH--HH---HHHHHTCCEEEEEBTT----------T------BBCSSC
T ss_pred CCceeeHHHhcCCceEEEecCCc----cHHHHHH--HH---HHHhcCCceEEEEeCC----------c------cccCcc
Confidence 48889999999777666653211 1111111 11 2244576654443221 0 567877
Q ss_pred HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEec
Q 015842 297 EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIE 364 (399)
Q Consensus 297 ~lYkaLGl~r~~r~s~lsgfl~~P~v~~~~~rA~~~G~~gn~~GD~~qLGGtFVId~gGg~I~yah~d 364 (399)
.+.+++|+.. +|.++|.||| -|.|....
T Consensus 489 ~~~~~~~~~~---------------------------------------~~~~lvRPD~-~va~r~~~ 516 (535)
T 3ihg_A 489 AVSERYGIGK---------------------------------------AGASLVRPDG-IVAWRTDE 516 (535)
T ss_dssp CHHHHHTCTT---------------------------------------TCEEEECTTS-BEEEEESS
T ss_pred hHHHHhCCCC---------------------------------------CceEeeCCCc-eeEEecCC
Confidence 7888777631 3799999996 89988765
No 317
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=64.09 E-value=1.2 Score=36.45 Aligned_cols=51 Identities=24% Similarity=0.402 Sum_probs=44.8
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
++..||+.-||-||++.+.+.|....+++ .++..||- ..|+. -||-.|.+.
T Consensus 24 ~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~lt~~DL~-~lGI~~~GhRkkIl~ 78 (103)
T 2ke7_A 24 TVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLL-EIGILNSGHRQRILQ 78 (103)
T ss_dssp CTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccCCHHHHh-HCCCCCHHHHHHHHH
Confidence 56679999999999999999999998876 99999996 68997 699988864
No 318
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=63.90 E-value=8.4 Score=34.35 Aligned_cols=40 Identities=13% Similarity=-0.005 Sum_probs=27.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
++|||| -|-..||+-|+...--|.++..+... .+.++-|=
T Consensus 41 ~k~VVV-dF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVD 80 (160)
T 2av4_A 41 ERLVCI-RFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVD 80 (160)
T ss_dssp SSEEEE-EEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEE
T ss_pred CCEEEE-EEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEE
Confidence 445554 45679999999999888887777643 14444443
No 319
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.71 E-value=1.4 Score=36.12 Aligned_cols=53 Identities=11% Similarity=0.168 Sum_probs=46.5
Q ss_pred hHHHHhhhccchhhhh--hhHHHHHcCCChHHHhccCcccchhhhcc-ccccccccc
Q 015842 35 DALEIRSYLHDRALMQ--YADIFEASGKSLPELLNLSTGDLSSQFGM-KRGHMARFK 88 (399)
Q Consensus 35 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 88 (399)
..-++-.||...||=+ |++.++..+++-..|+.+...+|- +.|+ +-||.-+++
T Consensus 31 s~~~V~~WL~~lgl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLk-eLGI~~~G~R~kil 86 (103)
T 2e8o_A 31 GPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLDESRFE-NLGVSSLGERKKLL 86 (103)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTCCTTTTTTCCHHHHH-HTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHHHHHHHHcCCCHHHHHhCCHHHHH-HcCCCCHHHHHHHH
Confidence 6678889999999987 999999999999999999999994 6999 569977765
No 320
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=63.13 E-value=4.4 Score=30.80 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=13.6
Q ss_pred EeecCC----CCcchHHHHHHHHh
Q 015842 235 LCIRRP----GCIMCRAEAHQLYA 254 (399)
Q Consensus 235 vFyRg~----gCP~Cr~el~~L~e 254 (399)
++|-.. |||+|+....-|.+
T Consensus 3 ~iY~~~~~~~~Cp~C~~ak~~L~~ 26 (87)
T 1aba_A 3 KVYGYDSNIHKCGPCDNAKRLLTV 26 (87)
T ss_dssp EEEECCTTTSCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCccHHHHHHHHHH
Confidence 345567 99999876655554
No 321
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=60.61 E-value=7.5 Score=33.18 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=24.7
Q ss_pred CCEEEEeecCCCCcchHHHHHHH-HhccchhhhcCCeEEEEe
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQL-YAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L-~e~~pef~alGV~LVaIs 270 (399)
.+++|.|+ .+.||+|......| .++..+.. ..++++.+-
T Consensus 18 ~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~ 57 (195)
T 3c7m_A 18 DKTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFH 57 (195)
T ss_dssp TTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEE
T ss_pred CcEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEe
Confidence 45677777 49999999877766 54433332 135665554
No 322
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=59.65 E-value=15 Score=31.59 Aligned_cols=29 Identities=21% Similarity=0.054 Sum_probs=21.9
Q ss_pred EEEEeecCCCC--cchHHHHHHHHhccchhh
Q 015842 232 AVLLCIRRPGC--IMCRAEAHQLYAKKPIFD 260 (399)
Q Consensus 232 vVLvFyRg~gC--P~Cr~el~~L~e~~pef~ 260 (399)
.||++|...|| +-|+..+--|-++..++.
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~ 65 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFP 65 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTST
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHcc
Confidence 46666677799 999999888777666653
No 323
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.60 E-value=9.2 Score=30.87 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=18.8
Q ss_pred EEeecCCCCcchHH-----HHHHHHhccchhhhcCCeEEEEe
Q 015842 234 LLCIRRPGCIMCRA-----EAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 234 LvFyRg~gCP~Cr~-----el~~L~e~~pef~alGV~LVaIs 270 (399)
|++|-..|||+|.. .+.++ |++.|+....|-
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~------L~~~gi~y~~vd 45 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRF------LEANKIEFEEVD 45 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH------HHHTTCCEEEEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHH------HHHcCCCEEEEE
Confidence 34455789999984 34433 445666655553
No 324
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=58.56 E-value=2.2 Score=34.84 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=45.2
Q ss_pred hHHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchh-hhcc-cccccccccc
Q 015842 35 DALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSS-QFGM-KRGHMARFKD 89 (399)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 89 (399)
..=+...||...|+=+|++.++ . ++=..|+.++..||-. .+|+ +-||.-||+.
T Consensus 21 s~edV~~WL~~~Gl~~Y~~~F~-~-IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~ 75 (97)
T 2d8c_A 21 SPKKVADWLLENAMPEYCEPLE-H-FTGQDLINLTQEDFKKPPLYRVSSDNGQRLLD 75 (97)
T ss_dssp CTTHHHHHHHHTTCTTTTTTTT-T-CCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHH
T ss_pred CHHHHHHHHHHcCCHHHHHHHH-c-CCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHH
Confidence 3446789999999999999995 4 8889999999999988 6786 5799988875
No 325
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=57.53 E-value=27 Score=32.93 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=31.5
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 231 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 231 pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
+.++++|-..||+-|+.....|.++..+++.. +.++.|-.+
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 45555555689999999999999988888754 677777665
No 326
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=54.83 E-value=9.2 Score=34.05 Aligned_cols=25 Identities=12% Similarity=0.380 Sum_probs=19.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQL 252 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L 252 (399)
.+.|+.|+.|=-+.||+|...-..+
T Consensus 27 ~~a~vtvvef~D~~CP~C~~~~~~~ 51 (202)
T 3gha_A 27 DDAPVTVVEFGDYKCPSCKVFNSDI 51 (202)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHh
Confidence 3568888888999999998765544
No 327
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=54.31 E-value=4.7 Score=38.79 Aligned_cols=38 Identities=18% Similarity=0.389 Sum_probs=26.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
+++.+|+.|=.+-||||+....+|.+.. ++..++++.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l---~~~~Vr~i~~ 183 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHL---KENTVRMVVV 183 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHH---HHCEEEEEEC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHh---hCCcEEEEEe
Confidence 3556667777999999999988888544 3445555543
No 328
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=54.08 E-value=22 Score=32.34 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=22.4
Q ss_pred chhhccC--CCEEEEeecCCC-CcchHHHHHHHHhc
Q 015842 223 ALELWRE--SPAVLLCIRRPG-CIMCRAEAHQLYAK 255 (399)
Q Consensus 223 LsdL~~~--~pvVLvFyRg~g-CP~Cr~el~~L~e~ 255 (399)
|.+++++ +|++|.||=-+| |+.|+....-|.++
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~el 52 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLF 52 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHH
Confidence 4566654 799998885443 99998766544443
No 329
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=52.09 E-value=2.8 Score=34.55 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=42.5
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhhcccc-cccccccc
Q 015842 38 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMKR-GHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~ 89 (399)
.+..||..-+|-||++.+++.|..-.|++ .++..|| .+-|... ||-.|.+.
T Consensus 31 ~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~Lt~eDL-~eLGIt~~GHRkkIL~ 85 (101)
T 2lmr_A 31 SVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDL-RDIGISDPQHRRKLLQ 85 (101)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHH-HHCCCCCHHHHHHHHH
Confidence 56779999999999999999999855544 5999998 5789885 99888764
No 330
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=49.92 E-value=12 Score=33.60 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=22.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHh
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e 254 (399)
.+.|+.|+.|=-+-||||+.....+..
T Consensus 13 ~~a~vtivef~D~~Cp~C~~~~~~~~~ 39 (205)
T 3gmf_A 13 PAAKLRLVEFVSYTCPHCSHFEIESEG 39 (205)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHH
Confidence 467999999999999999987765543
No 331
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=49.53 E-value=9.2 Score=31.13 Aligned_cols=64 Identities=11% Similarity=0.050 Sum_probs=40.0
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ecCCh-hhHHhhhcCCCCCceeEeccchHHHHHhCCC
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LHEYI-ESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 305 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI--spE~~-e~~ik~F~~~~l~f~VLsDp~r~lYkaLGl~ 305 (399)
|.+|-..+||+|+...+-|.+ .|+....| ..+.+ ...++.+.. .....-+.......|+.+|+.
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~-~~g~~~l~n~~~~~~k~l~~~ 68 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCA-EHGWQTVLNRAGTTFRKLDEA 68 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHH-HHCHHHHBCTTSHHHHTSCHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHH-hCChHHhccCCcHhHHhcCcc
Confidence 467888999999877766655 46665444 22221 123555543 123456667888999988875
No 332
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=48.71 E-value=10 Score=31.85 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=23.0
Q ss_pred echhhccCCCEEEEeecC----CCCcchHHHHHHHHh
Q 015842 222 KALELWRESPAVLLCIRR----PGCIMCRAEAHQLYA 254 (399)
Q Consensus 222 sLsdL~~~~pvVLvFyRg----~gCP~Cr~el~~L~e 254 (399)
.+.++.++.||| +|-.+ +.||||+.-.+-|.+
T Consensus 12 ~i~~~i~~~~Vv-vF~Kgt~~~P~C~fc~~ak~lL~~ 47 (118)
T 2wul_A 12 QLDALVKKDKVV-VFLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp HHHHHHHHSSEE-EEESBCSSSBSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEE-EEEcCCCCCCCCHHHHHHHHHHHH
Confidence 457777888865 56766 589999887766654
No 333
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.67 E-value=18 Score=32.19 Aligned_cols=46 Identities=7% Similarity=0.065 Sum_probs=30.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhc---cchhhhcCCeEEEEecCCh
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQLYAK---KPIFDALGIQLFAVLHEYI 274 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L~e~---~pef~alGV~LVaIspE~~ 274 (399)
++++.|++++.+.||+.|+...+++-.. ..-|++ +.=+++..-...
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~ 101 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKD 101 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSH
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCc
Confidence 4578899999999999999999877432 333443 444444444443
No 334
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=47.14 E-value=5.7 Score=38.17 Aligned_cols=53 Identities=25% Similarity=0.259 Sum_probs=47.4
Q ss_pred hHHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhcccc-cccccc
Q 015842 35 DALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKR-GHMARF 87 (399)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 87 (399)
++=++-++|..-||=+|.+.+...+++=.+|+++++.||....||+. +|-.++
T Consensus 19 ~~e~V~~WLe~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL 72 (265)
T 3tad_C 19 TKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKL 72 (265)
T ss_dssp CHHHHHHHHHHTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHH
T ss_pred ChHHHHHHHHHHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHH
Confidence 56778899998999999999999999999999999999999999874 666655
No 335
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=46.65 E-value=15 Score=33.54 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=27.0
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH-Hhccchh-hhcCCeEEEE
Q 015842 228 RESPAVLLCIRRPGCIMCRAEAHQL-YAKKPIF-DALGIQLFAV 269 (399)
Q Consensus 228 ~~~pvVLvFyRg~gCP~Cr~el~~L-~e~~pef-~alGV~LVaI 269 (399)
.+.|+.|+.|=-+.||+|+..-..+ .++..++ +.-.++++..
T Consensus 37 ~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~ 80 (226)
T 3f4s_A 37 PKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFR 80 (226)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEE
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 4578888889999999999876543 3333333 2224565544
No 336
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=43.38 E-value=19 Score=31.34 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=24.6
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 231 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 231 pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
|+.|.+|-.+.||+|......+.++.. +...+++++-+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 456788889999999955444444322 333357776553
No 337
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=41.16 E-value=8.7 Score=33.89 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=15.8
Q ss_pred CCEEEEeecCCCCcchHHHHHHH
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQL 252 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L 252 (399)
+++|+ -|=.+|||+|......|
T Consensus 22 ~~~vv-ef~d~~Cp~C~~~~~~l 43 (191)
T 3l9s_A 22 EPQVL-EFFSFYCPHCYQFEEVL 43 (191)
T ss_dssp SSCEE-EEECTTCHHHHHHHHTS
T ss_pred CCeEE-EEECCCChhHHHhChhc
Confidence 45554 55689999999876543
No 338
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=40.33 E-value=16 Score=29.25 Aligned_cols=49 Identities=24% Similarity=0.396 Sum_probs=40.3
Q ss_pred HHhhhcc--chhhhhhhHHHHHcCCChHHHhccCcccchhhhccc-ccccccccc
Q 015842 38 EIRSYLH--DRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 89 (399)
Q Consensus 38 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 89 (399)
+.-.||+ |.++-+| .+.+.+++-..|+.++..||- +.|++ -||.-+.+.
T Consensus 18 ~V~~WL~~l~~~l~~Y--~F~~~~I~G~~LL~Lt~~dL~-~LGI~~~Ghr~~Il~ 69 (91)
T 1wwv_A 18 KVATWLRGLDDSLQDY--PFEDWQLPGKNLLQLCPQSLE-ALAVRSLGHQELILG 69 (91)
T ss_dssp THHHHHHHHCHHHHTS--CHHHHCCCHHHHTTCCTTTGG-GGTCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCccccc--cHHhcCccHHHHhhCCHHHHH-HcCCCcHhHHHHHHH
Confidence 4557887 7789999 799999999999999999996 68875 578766654
No 339
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=39.02 E-value=12 Score=28.85 Aligned_cols=53 Identities=21% Similarity=0.289 Sum_probs=39.0
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFEA 57 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 57 (399)
++.||+-.-=|....+.|++.|+|++.+++ .+|.|..-=|-+-++.=...|..
T Consensus 14 ~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~~lGI~~~ghrkkil~ai~~L~~ 73 (78)
T 1v38_A 14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESLLS 73 (78)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHTTTCCHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 577787777788889999999999988777 55666655677777655555543
No 340
>3pf6_A Hypothetical protein PP-LUZ7_GP033; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.60A {Pseudomonas phage LUZ7}
Probab=38.69 E-value=15 Score=27.25 Aligned_cols=29 Identities=48% Similarity=0.728 Sum_probs=21.9
Q ss_pred CCCccchhhHHHHhhhc------cc--hhhhhhhHHH
Q 015842 27 WDDVPTLKDALEIRSYL------HD--RALMQYADIF 55 (399)
Q Consensus 27 ~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~ 55 (399)
|---|++|||||=-..| || |+||-|-.+|
T Consensus 16 ypth~s~k~aleear~l~pggshhdfmra~mgyhntl 52 (62)
T 3pf6_A 16 YPTHPSTKDALEEARLLFPGGTHHDFMRALMGYHNTL 52 (62)
T ss_dssp SCCCSSHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHHHhCCCCchHHHHHHHHhhhHHH
Confidence 44568999999866555 44 7899998876
No 341
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=36.03 E-value=1.7e+02 Score=30.27 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=19.7
Q ss_pred ceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 015842 346 GGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 382 (399)
Q Consensus 346 GGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~ 382 (399)
|+++||.||| -|.|...- .+.++|-+.+..
T Consensus 606 g~~v~vRPD~-yv~~~~~~------~~~~~l~~~~~~ 635 (639)
T 2dkh_A 606 GALVVVRPDQ-YVAQVLPL------GDHAALSAYFES 635 (639)
T ss_dssp CEEEEECTTS-BEEEEECT------TCHHHHHHHHHT
T ss_pred eEEEEECCCC-ceEEeech------hhHHHHHHHHHH
Confidence 5889999995 78776542 234566555543
No 342
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=35.94 E-value=19 Score=34.42 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=21.3
Q ss_pred CC-EEEEeecCCCCcchHHHHHHHHhcc
Q 015842 230 SP-AVLLCIRRPGCIMCRAEAHQLYAKK 256 (399)
Q Consensus 230 ~p-vVLvFyRg~gCP~Cr~el~~L~e~~ 256 (399)
+| ++|..|-..|||||..--+-|.+..
T Consensus 41 ~~~~~VelyTs~gCp~C~~Ak~lL~~~~ 68 (270)
T 2axo_A 41 AVKGVVELFTSQGCASCPPADEALRKMI 68 (270)
T ss_dssp CCCCEEEEEECTTCTTCHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCChHHHHHHHHHhh
Confidence 44 8899999999999987666666553
No 343
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=35.94 E-value=18 Score=27.99 Aligned_cols=53 Identities=13% Similarity=0.202 Sum_probs=42.2
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFEA 57 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 57 (399)
++.+|+-.-=|..-.+.|.++|+|+...+. ..|.|...=|-+-++.-...|..
T Consensus 9 ~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~l~~ 68 (81)
T 1ucv_A 9 TVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQTMRA 68 (81)
T ss_dssp BHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHHhCCCCChhHHHHHHHHHHHHHH
Confidence 788888887788889999999999765554 56777777888888877777654
No 344
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=34.12 E-value=36 Score=27.31 Aligned_cols=48 Identities=10% Similarity=0.130 Sum_probs=36.4
Q ss_pred cccccccCCCceechhhccCCCEEEEeecCC--CCcchHHHHH-----HHHhccchh
Q 015842 210 MERLVKTKTPPMKALELWRESPAVLLCIRRP--GCIMCRAEAH-----QLYAKKPIF 259 (399)
Q Consensus 210 ~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~--gCP~Cr~el~-----~L~e~~pef 259 (399)
+.|.+..+|-.|.+-++ + ..+|.+-|.|. |||.....+. .|.+..|++
T Consensus 19 IRP~L~~dGGdvelv~v-~-~g~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev 73 (88)
T 1xhj_A 19 LRPFLLRDGGDCTLVDV-E-DGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGV 73 (88)
T ss_dssp HHHHHHHHSCEEEEEEC-C-SSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTC
T ss_pred hcHHHHhcCCeEEEEEE-E-CCEEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCc
Confidence 46677888999999997 4 46787888887 8999999888 444445655
No 345
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=32.15 E-value=16 Score=32.67 Aligned_cols=21 Identities=24% Similarity=0.619 Sum_probs=15.1
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 015842 234 LLCIRRPGCIMCRAEAHQLYA 254 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e 254 (399)
|.+|-..|||+|+.-..-|.+
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 445566899999976666654
No 346
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=31.41 E-value=35 Score=30.35 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=27.0
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 231 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 231 pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
++-|.||--+-||+|..-...|.++..+. +++|+-.
T Consensus 5 ~~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 5 PRVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred CceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 35678899999999999988888865543 6665443
No 347
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=30.26 E-value=22 Score=27.39 Aligned_cols=52 Identities=4% Similarity=0.164 Sum_probs=39.7
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFE 56 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 56 (399)
++.+|+-.-=|..-.+.|.++|++|.-.+. ..|.|...=|-+-++.-...|.
T Consensus 13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~l~ 71 (82)
T 1b4f_A 13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMR 71 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 788888777788889999999998865544 5566777778877777666654
No 348
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=29.93 E-value=33 Score=29.02 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=31.1
Q ss_pred cceEEEEecCCCcEEEEEecCCCCC-----CCCHHHHHHHHHhhhhhh
Q 015842 345 KGGLFIVGRGRSGIAYQFIERNFGD-----WAPLAEVIEICTQLQDQQ 387 (399)
Q Consensus 345 LGGtFVId~gGg~I~yah~d~d~gD-----rad~eeVLaAl~~l~~~~ 387 (399)
.|..+++|++| ++++.+.+..... ..+.+++++.++.+....
T Consensus 104 ~Pt~~~~d~~G-~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 104 IPRILFLDPSG-KVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp SSEEEEECTTS-CBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC-CEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 69999999996 7777666654333 278999999998875444
No 349
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.37 E-value=23 Score=27.83 Aligned_cols=53 Identities=6% Similarity=0.150 Sum_probs=40.9
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFEA 57 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 57 (399)
++.+|+-.-=|....+.|.++|+|++-.+. ..|.|...=|-+-++.-...|..
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhRkkIl~ai~~l~~ 73 (88)
T 2e8n_A 14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLGLKD 73 (88)
T ss_dssp SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 678888777788889999999999765555 56777777788888777666653
No 350
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=29.17 E-value=31 Score=34.47 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=18.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHH
Q 015842 223 ALELWRESPAVLLCIRRPGCIMCRAEAHQL 252 (399)
Q Consensus 223 LsdL~~~~pvVLvFyRg~gCP~Cr~el~~L 252 (399)
+.++.+..+++| |. ..|||||+...+.|
T Consensus 254 V~~lI~~~~VvV-Ys-k~~CPyC~~Ak~~L 281 (362)
T 2jad_A 254 VKDLIAENEIFV-AS-KTYCPYSHAALNTL 281 (362)
T ss_dssp HHHHHHTCSEEE-EE-CTTCHHHHHHHHHH
T ss_pred HHHHhccCCEEE-EE-cCCCcchHHHHHHH
Confidence 455666777554 43 48999998776643
No 351
>1ic9_A TH10AOX; three stranded antiparallel beta-sheet mini-protein motif de novo protein design; HET: DPR DAL; NMR {Synthetic} SCOP: k.26.1.1 PDB: 1ico_A* 1icl_A*
Probab=29.07 E-value=16 Score=23.30 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.4
Q ss_pred eecCCCCcc
Q 015842 236 CIRRPGCIM 244 (399)
Q Consensus 236 FyRg~gCP~ 244 (399)
-||++|||-
T Consensus 11 tfrgpgcpt 19 (29)
T 1ic9_A 11 TFRGPGCPT 19 (29)
T ss_dssp EEECSCCCC
T ss_pred eecCCCCCc
Confidence 479999984
No 352
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=27.90 E-value=27 Score=33.46 Aligned_cols=66 Identities=21% Similarity=0.159 Sum_probs=51.9
Q ss_pred hHhhcCCCCccchhhHHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhhccc-cccccccc
Q 015842 21 KLLEEGWDDVPTLKDALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 88 (399)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (399)
+|...-|+...++..+ -+..||.+=||-||.+.+..+|..-.-|..++-.||- ..||. .||-.+++
T Consensus 78 el~~~~~~~~~~~d~~-wv~~WL~~IGL~QY~~~F~~~~iDg~~L~~LT~~DL~-~LGIt~~~HR~kil 144 (265)
T 3tad_C 78 ALGSEEETNYGKLDFN-WVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLL-SLKVVSVLHHLSIK 144 (265)
T ss_dssp HHHHCSCCSGGGCCHH-HHHHHHHHHTCGGGHHHHHHHTCCHHHHHTCBHHHHH-HTTCCBHHHHHHHH
T ss_pred HhcccccccccccChH-HHHHHHHHcCcHHHHHHHHHcCCCHHHhcccCHHHHH-HcCCCcHHhHHHHH
Confidence 3333345554454422 3569999999999999999999999999999999998 78886 78988876
No 353
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=27.09 E-value=20 Score=35.58 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=52.2
Q ss_pred hHhhcCCC-Cccchh--hHHHHhhhccc-hhhhh-hhHHHHHcCCChHHHhccCcccchhhhcccc-cccccc
Q 015842 21 KLLEEGWD-DVPTLK--DALEIRSYLHD-RALMQ-YADIFEASGKSLPELLNLSTGDLSSQFGMKR-GHMARF 87 (399)
Q Consensus 21 ~~~~~~~~-~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 87 (399)
.|+++..+ ++| .. ++=++.++|.. -|+=+ |.+......|+=..|+++|+.||...+||+. .|--+|
T Consensus 24 ~llee~~r~~~P-fs~W~~~~V~aWLe~~iGmp~~Yv~~~r~nvkSG~~Ll~LSd~dLekeLGI~nPLHRKKL 95 (334)
T 3tac_B 24 ELLEEARRKGLP-FAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKL 95 (334)
T ss_dssp HHHHHHHHTTCC-GGGCCHHHHHHHHHHTTCCCHHHHHHHHHHCCSHHHHHTCCHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHhcccCCCC-hhhCCcHHHHHHHHHHhcChHHHHHHHHHHccchHHHHhCCHHHHHHHhCCCCHHHHHHH
Confidence 45555554 444 33 88899999988 67645 9999999999999999999999999999975 455444
No 354
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=26.92 E-value=1.2e+02 Score=24.21 Aligned_cols=62 Identities=5% Similarity=0.033 Sum_probs=34.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCC--CCceeEec
Q 015842 229 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRY--WGGVVVYD 293 (399)
Q Consensus 229 ~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE~~e~~ik~F~~~~--l~f~VLsD 293 (399)
+.|+|+.|+=- |.-|+.....|.++..+++.. +.++-|-.+.-......|.-.. +|--++.+
T Consensus 23 ~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~ 86 (133)
T 2djk_A 23 GIPLAYIFAET--AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQE 86 (133)
T ss_dssp TSCEEEEECSC--SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEEEEC
T ss_pred CCCEEEEEecC--hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEEEEe
Confidence 46777766533 788998888887776666432 5666665443332233343233 55444443
No 355
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=26.90 E-value=39 Score=29.40 Aligned_cols=33 Identities=6% Similarity=-0.117 Sum_probs=25.9
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 015842 234 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 269 (399)
Q Consensus 234 LvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaI 269 (399)
|.||--+-||+|..-...|.++..++ +++|+-.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~ 35 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYN 35 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 67888999999999999888876655 5665543
No 356
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=25.91 E-value=37 Score=28.31 Aligned_cols=36 Identities=3% Similarity=-0.095 Sum_probs=26.7
Q ss_pred cceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 015842 345 KGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 385 (399)
Q Consensus 345 LGGtFVId~gGg~I~yah~d~d~gDrad~eeVLaAl~~l~~ 385 (399)
.|.++++|++| ++++.+. |-..+.+++++.++.+-.
T Consensus 131 ~Pt~~lid~~G-~~~~~~~----G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 131 QPFYVLIDNEG-NPLNKSY----AYDEDISKYINFLQTGLE 166 (172)
T ss_dssp SSEEEEECTTS-CBSSCCB----CSCCCHHHHHHHHHHHHH
T ss_pred cceEEEECCCC-CEEeecc----CCCCCHHHHHHHHHHHHH
Confidence 69999999996 7777665 444448888888777543
No 357
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=25.74 E-value=29 Score=33.30 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=25.9
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 015842 220 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 259 (399)
Q Consensus 220 ~VsLsdL~~~~pvVLvFyRg~gCP~Cr~el~~L~e~~pef 259 (399)
.+.+.+.+.+..+ +.| --+|||.|+.....+.+...++
T Consensus 189 ~~~la~~l~~~~v-V~F-~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGG-TMY-GAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTC-EEE-ECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCE-EEE-ECCCCHHHHHHHHHHHHHHHHc
Confidence 4556666655543 344 4789999999888887765444
No 358
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=24.87 E-value=50 Score=26.12 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=39.3
Q ss_pred cchhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHHH
Q 015842 4 YAMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFEA 57 (399)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 57 (399)
+++.+|+-.-=|..-.+.|.++|++++..+. ..|.|...=|-+-++.-...|..
T Consensus 16 ~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GHrkkIl~ai~~L~~ 76 (91)
T 1x40_A 16 VDIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHRRRILKQLQIILS 76 (91)
T ss_dssp CBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHHHCCCCCHhHHHHHHHHHHHHHh
Confidence 4567888888888889999999988766655 45666666677777766555543
No 359
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=24.53 E-value=1e+02 Score=28.42 Aligned_cols=43 Identities=5% Similarity=-0.143 Sum_probs=22.2
Q ss_pred hhhcc-CCCEEEEeec-CCCCcchHHHHHHHHhccchhhh-cCCeEEEEe
Q 015842 224 LELWR-ESPAVLLCIR-RPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVL 270 (399)
Q Consensus 224 sdL~~-~~pvVLvFyR-g~gCP~Cr~el~~L~e~~pef~a-lGV~LVaIs 270 (399)
.++.. .+++||.||- .+||+ ..-.+.++..++.. .++.++.|-
T Consensus 16 ~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVD 61 (240)
T 2qc7_A 16 YKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVG 61 (240)
T ss_dssp HHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred HHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEe
Confidence 33444 3456666664 38998 23333333333432 346666676
No 360
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=24.28 E-value=42 Score=30.57 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=30.2
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhh-hcCCeEEEE
Q 015842 230 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD-ALGIQLFAV 269 (399)
Q Consensus 230 ~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~-alGV~LVaI 269 (399)
+|+-|-||--+-||+|..-...|.++..++. ..+++|.-.
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~ 41 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHR 41 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEE
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEE
Confidence 4677899999999999999999988766654 346666543
No 361
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=24.20 E-value=33 Score=26.69 Aligned_cols=53 Identities=6% Similarity=0.150 Sum_probs=41.0
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFEA 57 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 57 (399)
++.+|+-.-=|..-.+.|.++|+|+...+. ..|.|...=|-+-++.-...|.+
T Consensus 18 ~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 18 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 566777666677888999999999776665 67788888888888877766654
No 362
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=23.84 E-value=38 Score=26.90 Aligned_cols=52 Identities=8% Similarity=0.216 Sum_probs=39.1
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFE 56 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 56 (399)
++++|+-.-=|....+.|.++|++|+-.+. ..|.|...=|-+-++.-...|.
T Consensus 28 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~L~ 86 (94)
T 1b0x_A 28 SVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAMR 86 (94)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHH
Confidence 678888777788899999999998876554 4566666667777776666554
No 363
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=23.66 E-value=52 Score=28.68 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=26.3
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 015842 233 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 270 (399)
Q Consensus 233 VLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIs 270 (399)
-|.||--+.||+|..-...|.++..++. .+++++-+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 4678889999999987777776655442 256766554
No 364
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=22.87 E-value=1.2e+02 Score=26.62 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=34.6
Q ss_pred chhhccC-CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 015842 223 ALELWRE-SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 272 (399)
Q Consensus 223 LsdL~~~-~pvVLvFyRg~gCP~Cr~el~~L~e~~pef~alGV~LVaIspE 272 (399)
+..++.. .|.+++||-..||+-|+..+..+.++..+++.. +..+.|-..
T Consensus 123 ~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~ 172 (227)
T 4f9z_D 123 VIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG 172 (227)
T ss_dssp HHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred HHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc
Confidence 3455554 377777777889999999888888877777653 555555553
No 365
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=20.33 E-value=38 Score=26.93 Aligned_cols=52 Identities=10% Similarity=0.218 Sum_probs=37.4
Q ss_pred chhhhhhccccccchhhHhhcCCCCccchh-------hHHHHhhhccchhhhhhhHHHH
Q 015842 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK-------DALEIRSYLHDRALMQYADIFE 56 (399)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 56 (399)
++++|+-.--|....+.|.+.|||+.-.+. ..|.|...=|-+-++.....|.
T Consensus 27 ~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~~GHRkkIL~ai~~Lr 85 (90)
T 3h8m_A 27 SVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMR 85 (90)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 577887766688889999999999766554 3555555557777776666554
Done!