Query 015845
Match_columns 399
No_of_seqs 170 out of 337
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 01:26:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 4E-124 8E-129 910.0 18.2 383 9-392 20-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 8E-109 2E-113 830.0 26.4 359 13-376 2-361 (361)
3 KOG1515 Arylacetamide deacetyl 95.5 0.061 1.3E-06 54.5 8.8 69 143-212 143-212 (336)
4 PRK10162 acetyl esterase; Prov 95.0 0.083 1.8E-06 52.6 7.9 44 147-190 132-178 (318)
5 PF00326 Peptidase_S9: Prolyl 93.4 0.078 1.7E-06 48.9 3.6 39 147-185 45-83 (213)
6 PRK13604 luxD acyl transferase 91.8 0.85 1.8E-05 45.8 8.7 51 146-206 91-141 (307)
7 PF00135 COesterase: Carboxyle 91.7 0.63 1.4E-05 48.5 8.2 58 145-207 184-246 (535)
8 PF10340 DUF2424: Protein of u 91.5 1.6 3.4E-05 45.0 10.5 109 49-189 107-218 (374)
9 COG1506 DAP2 Dipeptidyl aminop 91.2 0.27 5.8E-06 53.7 4.9 109 147-270 454-562 (620)
10 PRK10566 esterase; Provisional 89.8 0.71 1.5E-05 43.1 5.9 35 149-183 90-124 (249)
11 PRK10115 protease 2; Provision 88.9 0.55 1.2E-05 52.0 5.0 36 147-182 505-540 (686)
12 PF07859 Abhydrolase_3: alpha/ 88.4 0.83 1.8E-05 41.6 5.2 43 148-190 50-95 (211)
13 cd00312 Esterase_lipase Estera 84.5 1.4 2.9E-05 46.2 4.9 41 146-186 153-196 (493)
14 PF01764 Lipase_3: Lipase (cla 83.7 4 8.6E-05 34.7 6.7 41 165-205 63-104 (140)
15 TIGR01840 esterase_phb esteras 83.1 1.6 3.6E-05 40.3 4.4 37 148-184 77-113 (212)
16 PF12695 Abhydrolase_5: Alpha/ 82.9 1.8 3.9E-05 36.4 4.2 40 145-185 41-80 (145)
17 PF10503 Esterase_phd: Esteras 82.7 5.3 0.00012 38.1 7.7 41 149-193 80-120 (220)
18 COG0657 Aes Esterase/lipase [L 82.3 2.8 6.1E-05 41.1 5.9 42 149-190 132-176 (312)
19 PRK05077 frsA fermentation/res 81.1 7.9 0.00017 40.2 9.0 35 149-183 248-282 (414)
20 COG2939 Carboxypeptidase C (ca 79.5 23 0.00051 37.8 11.7 139 48-202 87-237 (498)
21 PF05677 DUF818: Chlamydia CHL 79.2 4.6 9.9E-05 41.3 6.2 53 150-205 198-254 (365)
22 PLN02408 phospholipase A1 78.5 7 0.00015 40.2 7.4 64 154-224 188-252 (365)
23 COG3509 LpqC Poly(3-hydroxybut 77.2 18 0.00038 36.4 9.5 43 149-191 127-169 (312)
24 PLN02442 S-formylglutathione h 75.4 6.1 0.00013 38.6 5.8 22 164-185 141-162 (283)
25 cd00707 Pancreat_lipase_like P 74.7 7.5 0.00016 38.0 6.2 58 149-209 95-152 (275)
26 PLN02802 triacylglycerol lipas 74.1 10 0.00022 40.6 7.4 52 166-223 330-381 (509)
27 PF00756 Esterase: Putative es 74.0 3.8 8.1E-05 38.4 3.8 43 148-191 97-140 (251)
28 TIGR02821 fghA_ester_D S-formy 72.7 4.5 9.8E-05 39.1 4.1 23 164-186 136-158 (275)
29 PF02230 Abhydrolase_2: Phosph 72.2 8.4 0.00018 35.7 5.7 53 149-207 89-141 (216)
30 PF12242 Eno-Rase_NADH_b: NAD( 70.9 6.5 0.00014 31.7 3.8 45 147-196 20-66 (78)
31 cd00519 Lipase_3 Lipase (class 70.8 13 0.00029 34.7 6.7 39 165-204 127-165 (229)
32 PLN02209 serine carboxypeptida 70.2 59 0.0013 34.2 12.0 144 46-201 52-206 (437)
33 PLN02454 triacylglycerol lipas 68.8 17 0.00037 38.1 7.5 65 153-224 215-282 (414)
34 cd00741 Lipase Lipase. Lipase 67.5 14 0.00031 32.1 5.9 28 164-191 26-53 (153)
35 COG1770 PtrB Protease II [Amin 67.4 5.6 0.00012 43.7 3.7 33 146-178 507-539 (682)
36 KOG4627 Kynurenine formamidase 66.4 6.1 0.00013 38.0 3.3 35 153-188 124-158 (270)
37 cd07224 Pat_like Patatin-like 65.9 6.9 0.00015 37.4 3.7 32 153-185 17-48 (233)
38 KOG1209 1-Acyl dihydroxyaceton 65.6 16 0.00034 35.5 5.9 66 162-227 4-76 (289)
39 PRK10439 enterobactin/ferric e 65.1 12 0.00026 39.0 5.6 43 149-191 265-313 (411)
40 cd07198 Patatin Patatin-like p 64.4 7.8 0.00017 34.8 3.6 30 153-185 16-45 (172)
41 PF03583 LIP: Secretory lipase 63.4 13 0.00028 36.7 5.3 64 145-209 43-115 (290)
42 COG2272 PnbA Carboxylesterase 63.1 8.4 0.00018 41.0 4.0 38 145-182 156-196 (491)
43 PF08840 BAAT_C: BAAT / Acyl-C 62.8 16 0.00036 34.2 5.6 55 149-207 5-59 (213)
44 PF05728 UPF0227: Uncharacteri 62.7 16 0.00035 33.9 5.4 36 151-192 46-81 (187)
45 TIGR03712 acc_sec_asp2 accesso 60.8 4.8 0.0001 42.8 1.7 25 164-188 355-379 (511)
46 PF00975 Thioesterase: Thioest 59.9 34 0.00073 31.3 7.1 52 149-203 51-102 (229)
47 cd07222 Pat_PNPLA4 Patatin-lik 58.5 10 0.00022 36.6 3.4 32 153-184 17-49 (246)
48 PLN03037 lipase class 3 family 57.1 33 0.00071 37.0 7.2 55 164-224 316-370 (525)
49 TIGR03100 hydr1_PEP hydrolase, 57.0 19 0.00041 34.7 5.1 36 148-184 83-118 (274)
50 PF07819 PGAP1: PGAP1-like pro 56.1 17 0.00036 34.6 4.4 35 149-183 65-102 (225)
51 PLN02298 hydrolase, alpha/beta 55.9 34 0.00073 33.5 6.8 36 148-183 116-151 (330)
52 cd07218 Pat_iPLA2 Calcium-inde 55.9 13 0.00029 35.9 3.8 31 153-184 18-48 (245)
53 PHA02857 monoglyceride lipase; 55.7 62 0.0013 30.5 8.3 21 165-185 96-116 (276)
54 cd07204 Pat_PNPLA_like Patatin 54.9 14 0.00029 35.6 3.6 32 153-184 17-49 (243)
55 KOG1282 Serine carboxypeptidas 53.5 1.4E+02 0.003 31.8 11.1 143 45-203 56-209 (454)
56 PLN02324 triacylglycerol lipas 52.5 47 0.001 34.9 7.3 38 152-190 201-239 (415)
57 KOG1516 Carboxylesterase and r 52.2 21 0.00046 37.9 5.0 35 149-183 175-212 (545)
58 PRK11460 putative hydrolase; P 52.1 22 0.00047 33.6 4.5 34 150-183 87-120 (232)
59 TIGR03101 hydr2_PEP hydrolase, 52.0 33 0.00071 33.6 5.9 33 149-184 85-117 (266)
60 PF12740 Chlorophyllase2: Chlo 50.9 19 0.0004 35.4 3.9 40 148-188 65-113 (259)
61 PLN02310 triacylglycerol lipas 50.4 46 0.00099 34.9 6.8 39 165-204 208-246 (405)
62 PF12697 Abhydrolase_6: Alpha/ 50.3 54 0.0012 28.4 6.6 37 166-206 66-102 (228)
63 PF01738 DLH: Dienelactone hyd 49.0 22 0.00049 32.6 4.0 37 147-183 79-115 (218)
64 PLN00021 chlorophyllase 47.3 24 0.00052 35.3 4.1 39 150-188 102-148 (313)
65 KOG4569 Predicted lipase [Lipi 46.1 51 0.0011 33.4 6.3 70 148-225 155-225 (336)
66 PF08237 PE-PPE: PE-PPE domain 45.9 60 0.0013 31.0 6.5 55 145-203 31-88 (225)
67 COG4814 Uncharacterized protei 45.3 25 0.00054 34.8 3.7 45 147-193 119-165 (288)
68 COG0412 Dienelactone hydrolase 45.1 32 0.0007 32.9 4.5 41 147-187 93-133 (236)
69 TIGR03695 menH_SHCHC 2-succiny 44.7 47 0.001 29.3 5.3 23 164-186 68-90 (251)
70 PF06028 DUF915: Alpha/beta hy 44.7 57 0.0012 31.9 6.2 60 144-207 83-144 (255)
71 cd07207 Pat_ExoU_VipD_like Exo 43.7 28 0.00061 31.5 3.7 30 152-184 16-45 (194)
72 PLN02965 Probable pheophorbida 43.7 55 0.0012 30.6 5.9 38 162-203 68-105 (255)
73 KOG2237 Predicted serine prote 43.7 21 0.00046 39.4 3.2 35 145-179 528-562 (712)
74 PLN02211 methyl indole-3-aceta 43.2 65 0.0014 31.0 6.4 24 162-185 83-106 (273)
75 PRK10673 acyl-CoA esterase; Pr 42.6 51 0.0011 30.3 5.4 36 165-204 80-115 (255)
76 PRK10349 carboxylesterase BioH 41.9 60 0.0013 30.1 5.8 47 151-204 62-108 (256)
77 PLN02571 triacylglycerol lipas 41.7 51 0.0011 34.6 5.6 29 162-190 221-250 (413)
78 TIGR03230 lipo_lipase lipoprot 41.0 60 0.0013 34.4 6.1 55 149-208 102-158 (442)
79 PLN00413 triacylglycerol lipas 40.8 42 0.0009 35.9 4.8 36 152-189 272-307 (479)
80 TIGR03056 bchO_mg_che_rel puta 40.3 70 0.0015 29.5 5.9 35 165-203 94-128 (278)
81 KOG3101 Esterase D [General fu 40.2 11 0.00024 36.3 0.5 35 148-182 118-157 (283)
82 TIGR00976 /NonD putative hydro 39.3 39 0.00085 36.2 4.6 37 147-184 79-115 (550)
83 PLN02719 triacylglycerol lipas 38.5 57 0.0012 35.2 5.5 26 165-190 297-322 (518)
84 cd07230 Pat_TGL4-5_like Triacy 38.3 36 0.00078 35.7 4.0 30 153-185 91-120 (421)
85 cd07220 Pat_PNPLA2 Patatin-lik 38.3 35 0.00076 33.2 3.6 31 153-183 22-53 (249)
86 TIGR01738 bioH putative pimelo 37.8 63 0.0014 28.6 5.0 50 150-206 52-101 (245)
87 PRK04940 hypothetical protein; 36.9 59 0.0013 30.2 4.7 23 166-192 60-82 (180)
88 TIGR03611 RutD pyrimidine util 36.6 53 0.0012 29.5 4.4 21 165-185 79-99 (257)
89 PLN02753 triacylglycerol lipas 36.2 66 0.0014 34.8 5.5 54 165-224 311-370 (531)
90 TIGR02240 PHA_depoly_arom poly 35.8 59 0.0013 30.8 4.7 36 165-204 90-125 (276)
91 cd07210 Pat_hypo_W_succinogene 35.3 45 0.00098 31.5 3.8 30 152-184 17-46 (221)
92 cd07205 Pat_PNPLA6_PNPLA7_NTE1 35.1 52 0.0011 29.4 4.0 31 151-184 16-46 (175)
93 PLN02894 hydrolase, alpha/beta 35.0 88 0.0019 32.2 6.2 22 165-186 175-196 (402)
94 PF01734 Patatin: Patatin-like 35.0 29 0.00062 30.0 2.3 19 167-185 28-46 (204)
95 PLN02162 triacylglycerol lipas 34.7 65 0.0014 34.4 5.1 37 151-189 265-301 (475)
96 cd07228 Pat_NTE_like_bacteria 34.4 55 0.0012 29.4 4.1 28 153-183 18-45 (175)
97 PLN02733 phosphatidylcholine-s 34.2 71 0.0015 33.8 5.4 34 149-184 147-180 (440)
98 PF06500 DUF1100: Alpha/beta h 33.7 49 0.0011 34.7 4.0 34 148-181 243-276 (411)
99 PLN02824 hydrolase, alpha/beta 32.8 1.2E+02 0.0025 29.0 6.3 34 166-203 102-135 (294)
100 COG0627 Predicted esterase [Ge 32.8 1.4E+02 0.0029 30.2 6.9 35 167-206 153-187 (316)
101 PRK00870 haloalkane dehalogena 32.2 1.3E+02 0.0029 28.8 6.7 37 165-205 114-150 (302)
102 COG1752 RssA Predicted esteras 32.1 49 0.0011 32.7 3.6 30 153-185 29-58 (306)
103 PLN02847 triacylglycerol lipas 31.9 1.1E+02 0.0025 33.7 6.5 24 166-189 251-274 (633)
104 PF05057 DUF676: Putative seri 31.6 40 0.00088 31.6 2.8 47 141-188 54-100 (217)
105 PF04631 Baculo_44: Baculoviru 31.5 28 0.0006 35.7 1.7 50 39-93 94-149 (371)
106 TIGR03739 PRTRC_D PRTRC system 31.4 81 0.0017 31.4 5.1 34 163-202 272-305 (320)
107 PLN02934 triacylglycerol lipas 31.2 89 0.0019 33.7 5.5 38 150-189 307-344 (515)
108 PF03575 Peptidase_S51: Peptid 30.0 52 0.0011 29.0 3.1 10 168-177 70-79 (154)
109 PTZ00472 serine carboxypeptida 29.5 7E+02 0.015 26.4 12.7 115 59-190 75-195 (462)
110 PRK15231 fimbrial adhesin prot 29.5 81 0.0018 28.4 4.1 62 45-114 78-139 (150)
111 COG0031 CysK Cysteine synthase 29.5 1.3E+02 0.0029 30.2 6.1 57 141-205 238-295 (300)
112 cd07390 MPP_AQ1575 Aquifex aeo 29.4 65 0.0014 28.7 3.7 53 123-176 2-54 (168)
113 TIGR02427 protocat_pcaD 3-oxoa 29.3 81 0.0018 27.9 4.3 21 165-185 78-98 (251)
114 PF03403 PAF-AH_p_II: Platelet 29.2 36 0.00078 35.1 2.2 17 165-181 227-243 (379)
115 cd07209 Pat_hypo_Ecoli_Z1214_l 29.2 61 0.0013 30.3 3.6 29 153-184 16-44 (215)
116 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.9 67 0.0015 32.2 3.9 30 153-185 87-116 (298)
117 cd01819 Patatin_and_cPLA2 Pata 28.8 78 0.0017 28.0 4.0 33 151-184 14-46 (155)
118 PLN02761 lipase class 3 family 28.6 1.1E+02 0.0024 33.1 5.7 25 166-190 294-318 (527)
119 COG4947 Uncharacterized protei 28.5 37 0.0008 31.9 1.8 14 167-180 102-115 (227)
120 cd07225 Pat_PNPLA6_PNPLA7 Pata 28.5 62 0.0013 32.4 3.6 32 152-186 32-63 (306)
121 PF05448 AXE1: Acetyl xylan es 28.4 52 0.0011 33.1 3.1 117 140-271 148-274 (320)
122 PF01083 Cutinase: Cutinase; 28.3 2.4E+02 0.0051 25.7 7.2 41 144-186 61-101 (179)
123 COG1075 LipA Predicted acetylt 28.1 1.3E+02 0.0029 30.3 6.0 44 142-192 106-149 (336)
124 KOG1553 Predicted alpha/beta h 28.0 1.3E+02 0.0028 31.3 5.7 77 142-227 287-364 (517)
125 PF00091 Tubulin: Tubulin/FtsZ 27.9 1.7E+02 0.0036 27.3 6.3 49 146-194 103-156 (216)
126 PF09752 DUF2048: Uncharacteri 27.9 1.2E+02 0.0025 31.3 5.5 37 151-194 163-199 (348)
127 cd07231 Pat_SDP1-like Sugar-De 27.2 76 0.0016 32.3 4.0 30 153-185 86-115 (323)
128 KOG2183 Prolylcarboxypeptidase 26.7 98 0.0021 32.8 4.7 50 140-193 134-190 (492)
129 cd07208 Pat_hypo_Ecoli_yjju_li 26.7 71 0.0015 30.7 3.6 30 152-183 15-44 (266)
130 PF04260 DUF436: Protein of un 26.5 72 0.0016 29.4 3.3 26 150-175 3-28 (172)
131 PRK10279 hypothetical protein; 26.5 71 0.0015 31.9 3.6 29 153-184 23-51 (300)
132 KOG4391 Predicted alpha/beta h 26.4 25 0.00054 34.2 0.4 43 149-191 132-174 (300)
133 KOG4389 Acetylcholinesterase/B 26.3 67 0.0015 34.7 3.5 109 119-232 137-281 (601)
134 PF00151 Lipase: Lipase; Inte 25.9 1.2E+02 0.0026 30.6 5.3 56 151-210 135-193 (331)
135 PLN02872 triacylglycerol lipas 25.5 1.2E+02 0.0025 31.5 5.1 38 142-182 139-176 (395)
136 PF11288 DUF3089: Protein of u 25.5 98 0.0021 29.5 4.2 68 113-181 42-110 (207)
137 PRK10749 lysophospholipase L2; 25.2 2.1E+02 0.0045 28.2 6.7 21 165-185 130-150 (330)
138 TIGR03343 biphenyl_bphD 2-hydr 24.7 99 0.0021 28.9 4.2 23 164-186 99-121 (282)
139 PRK13917 plasmid segregation p 24.7 1.7E+02 0.0037 29.6 6.1 27 162-193 289-315 (344)
140 KOG1552 Predicted alpha/beta h 24.6 99 0.0022 30.4 4.1 92 147-271 112-204 (258)
141 PRK11071 esterase YqiA; Provis 23.8 1.4E+02 0.003 27.2 4.8 34 149-184 46-79 (190)
142 COG4099 Predicted peptidase [G 23.5 95 0.0021 31.6 3.8 43 149-191 252-294 (387)
143 PRK10985 putative hydrolase; P 23.5 1.3E+02 0.0027 29.7 4.8 33 148-182 115-147 (324)
144 COG2382 Fes Enterochelin ester 23.5 1.2E+02 0.0026 30.5 4.5 65 143-212 148-218 (299)
145 PLN03016 sinapoylglucose-malat 23.4 4.3E+02 0.0094 27.8 8.9 132 46-189 50-188 (433)
146 TIGR01392 homoserO_Ac_trn homo 23.0 2E+02 0.0042 28.6 6.1 37 166-206 126-163 (351)
147 PF00561 Abhydrolase_1: alpha/ 22.8 1.5E+02 0.0032 26.2 4.8 39 147-187 27-65 (230)
148 cd07213 Pat17_PNPLA8_PNPLA9_li 22.3 1.3E+02 0.0028 29.5 4.6 38 145-184 13-52 (288)
149 TIGR01836 PHA_synth_III_C poly 22.3 1E+02 0.0022 30.7 3.9 34 149-184 121-154 (350)
150 PF02450 LCAT: Lecithin:choles 22.3 1.2E+02 0.0026 31.2 4.5 37 148-187 104-140 (389)
151 cd07232 Pat_PLPL Patain-like p 22.3 92 0.002 32.5 3.6 31 152-185 84-114 (407)
152 TIGR01250 pro_imino_pep_2 prol 22.2 1.8E+02 0.004 26.4 5.3 21 165-185 95-115 (288)
153 cd07229 Pat_TGL3_like Triacylg 21.9 1E+02 0.0022 32.2 3.8 30 153-185 101-130 (391)
154 cd07227 Pat_Fungal_NTE1 Fungal 21.9 1E+02 0.0022 30.4 3.7 30 153-185 28-57 (269)
155 cd07221 Pat_PNPLA3 Patatin-lik 21.8 1E+02 0.0022 30.0 3.6 32 153-184 18-50 (252)
156 cd07219 Pat_PNPLA1 Patatin-lik 21.6 1E+02 0.0022 32.0 3.8 16 169-184 47-62 (382)
157 PF08538 DUF1749: Protein of u 21.6 1.4E+02 0.0031 30.0 4.7 67 115-189 63-131 (303)
158 PF11187 DUF2974: Protein of u 21.4 1.5E+02 0.0033 28.3 4.7 38 149-189 70-107 (224)
159 cd07386 MPP_DNA_pol_II_small_a 21.4 2.6E+02 0.0057 26.3 6.4 32 146-177 15-48 (243)
160 PRK05579 bifunctional phosphop 20.8 2.4E+02 0.0051 29.4 6.3 78 114-201 143-235 (399)
161 PRK13690 hypothetical protein; 20.7 1.3E+02 0.0028 28.1 3.8 28 148-175 8-35 (184)
162 PF06821 Ser_hydrolase: Serine 20.6 2.3E+02 0.0049 25.7 5.5 34 149-185 41-74 (171)
163 PLN02385 hydrolase; alpha/beta 20.6 1.7E+02 0.0037 29.0 5.1 18 166-183 162-179 (349)
164 PLN02578 hydrolase 20.5 2.6E+02 0.0056 27.9 6.4 25 165-189 151-175 (354)
165 PF05577 Peptidase_S28: Serine 20.2 2.8E+02 0.0061 28.6 6.8 44 164-212 111-154 (434)
166 PRK03592 haloalkane dehalogena 20.2 3E+02 0.0065 26.1 6.6 34 166-203 93-126 (295)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.6e-124 Score=910.01 Aligned_cols=383 Identities=57% Similarity=1.105 Sum_probs=366.8
Q ss_pred HHHHHHHHHHHHhhCCcceeeEEEecccCCCCcccCCCCCcEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCC
Q 015845 9 WLNLLVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLG 88 (399)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ga~C~DGSp~~yy~~~g~g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~g 88 (399)
|...++...+.+......|++|+|+.|.++||+|+|||+||||+.+|+|+|+++|||+|||||||.+..+|..|..|++|
T Consensus 20 ~s~~lv~~~~~~~s~~~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~G 99 (402)
T KOG4287|consen 20 WSIPLVFGSLVIGSPGLMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLG 99 (402)
T ss_pred hhhhhhhhhhcccCccccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhcccc
Confidence 44444444444555568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccCCCCCCCcCcccccEEEEecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeE
Q 015845 89 SSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNA 168 (399)
Q Consensus 89 Ss~~~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v 168 (399)
||++|++++.|.||||+++++||||+|||+|+||||||++|+||.+.... ++++|||++||+|||++|+.+||.+|++.
T Consensus 100 SS~~mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~-t~l~fRG~rIw~av~~eLl~kGms~Ak~a 178 (402)
T KOG4287|consen 100 SSNYMEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNA-TQLQFRGARIWLAVMDELLAKGMSNAKQA 178 (402)
T ss_pred ccccchhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccch-hhhhhhHHHHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999998774333 39999999999999999999999999999
Q ss_pred EEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhcCcCcccCcccccCCCCCcc
Q 015845 169 VLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLC 248 (399)
Q Consensus 169 llsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C 248 (399)
||+||||||+|+++|+|++|+.||++++|+|++|||||||.+|++|...++.+|.+++++||+.++||+.|+++.+|++|
T Consensus 179 lLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~C 258 (402)
T KOG4287|consen 179 LLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLC 258 (402)
T ss_pred HhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHhhccCCCeeeeehhhhHHHHhhhccCCcCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHhhccCCCCce
Q 015845 249 FFPQYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRG 328 (399)
Q Consensus 249 ~f~~~~~~~i~tP~Filns~YD~wQl~nil~~~~~~~~~~w~~C~~~~~~Cs~~q~~~lq~f~~~~~~~l~~~~~~~~~G 328 (399)
|||||+++.|+||+||+|++||+|||++.++|+++|+.|.|..|++|...|+++||+++|+||.+|+.++..+.++...|
T Consensus 259 fFpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g 338 (402)
T KOG4287|consen 259 FFPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNG 338 (402)
T ss_pred cchHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EEecCccccccccccccccccCccccCCeeHHHHhhcccccCCccccccCCCCCCCCCCCCCCC
Q 015845 329 MFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFD 392 (399)
Q Consensus 329 ~F~~SC~~Hc~~~~~~~W~~~~~p~v~g~tl~~al~~W~~~r~~~~~iDc~yPcNptC~~~~~~ 392 (399)
+||+||++|||.+.+++|+++++|++++++|++||+||||+|..+|+|||||||||||+|+++.
T Consensus 339 ~finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 339 LFINSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred eeechHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 9999999999999999999999999999999999999999998899999999999999998763
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=8.1e-109 Score=829.99 Aligned_cols=359 Identities=50% Similarity=0.969 Sum_probs=342.1
Q ss_pred HHHHHHHHhhCCcceeeEEEecccCCCCcccCCCCCcEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCCCccc
Q 015845 13 LVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQ 92 (399)
Q Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~~~ga~C~DGSp~~yy~~~g~g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~ 92 (399)
|+|++++..++...++||+|++|++++|+|+||||++||+|+|+|++++||||||||||||||.++|..|..|.+|||+.
T Consensus 2 ~~~~~~~~~~~~~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~ 81 (361)
T PF03283_consen 2 LICLLVASNAQSDEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKN 81 (361)
T ss_pred eEEEeeeccccccccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccc
Confidence 34445555567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCcCcccccEEEEecCCCCccCCCccc-ccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEE
Q 015845 93 MVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEA-VNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLS 171 (399)
Q Consensus 93 ~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~-~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~vlls 171 (399)
|++.+.+.|||++++++||+|+|||+|||||||||+|+|+++. .+.+.++||||++|++|||+||+++||++|++|||+
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vllt 161 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLT 161 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEe
Confidence 9999999999999999999999999999999999999998773 456789999999999999999999899999999999
Q ss_pred eeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhcCcCcccCcccccCCCCCccccc
Q 015845 172 GCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFP 251 (399)
Q Consensus 172 G~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C~f~ 251 (399)
||||||+||++|+|+||++||+.++|++++|||||+|.++++|...++.++..++++|+++.++|++|.+..++. ||||
T Consensus 162 G~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~-C~f~ 240 (361)
T PF03283_consen 162 GCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE-CFFP 240 (361)
T ss_pred ccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc-ccch
Confidence 999999999999999999999889999999999999999999999999999999999999999999999877666 9999
Q ss_pred hHHhhccCCCeeeeehhhhHHHHhhhccCCcCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHhhccCCCCceEEe
Q 015845 252 QYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFI 331 (399)
Q Consensus 252 ~~~~~~i~tP~Filns~YD~wQl~nil~~~~~~~~~~w~~C~~~~~~Cs~~q~~~lq~f~~~~~~~l~~~~~~~~~G~F~ 331 (399)
||++|+|+||+|||||+||+|||+|+++|.. +.|.+|+.++..|+++|+++||+||++|+++|+.+.+++++|+|+
T Consensus 241 q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~Fi 316 (361)
T PF03283_consen 241 QYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGVFI 316 (361)
T ss_pred HHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEC
Confidence 9999999999999999999999999999954 899999999999999999999999999999999999999999999
Q ss_pred cCccccccccccccccccCccccCCeeHHHHhhcccccCCccccc
Q 015845 332 DACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKI 376 (399)
Q Consensus 332 ~SC~~Hc~~~~~~~W~~~~~p~v~g~tl~~al~~W~~~r~~~~~i 376 (399)
+||++|||++.+++|+.+.+|+|+|+||++||+||||+|+.+|.|
T Consensus 317 ~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 317 PSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred ccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999899988899999999999999999999988765
No 3
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.51 E-value=0.061 Score=54.53 Aligned_cols=69 Identities=17% Similarity=0.076 Sum_probs=40.9
Q ss_pred eeehHHHHHHHHHH-HHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC
Q 015845 143 HFRGARVFQAVMED-LMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 212 (399)
Q Consensus 143 ~frG~~n~~avl~~-l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~ 212 (399)
|.-|..-++-+++. ++. --.+.++|+|+|.||||--|..-+.++++-=+...++++..==-.|+...+.
T Consensus 143 y~D~~~Al~w~~~~~~~~-~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLK-LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred chHHHHHHHHHHHhHHHH-hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 44455555555553 221 3467888999999999988888888887631112334444333344444443
No 4
>PRK10162 acetyl esterase; Provisional
Probab=95.01 E-value=0.083 Score=52.57 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHh--CCC-ccCeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 147 ARVFQAVMEDLMAK--GMK-NAQNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 147 ~~n~~avl~~l~~~--~l~-~a~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
.....++++|+.++ .+. ++++|+|.|.||||.-++.-+-.+++.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 45577888888752 243 678999999999999988877777654
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.37 E-value=0.078 Score=48.86 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
..-+.+++++|.+++.-++++|.+.|.|+||+.|.+-+-
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 445677889998877789999999999999999987655
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=91.76 E-value=0.85 Score=45.79 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 015845 146 GARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (399)
Q Consensus 146 G~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (399)
|..-+.++++||+++ ..+++.|.|+|.||.-+++-+. .-+ ++ .++.|||+.
T Consensus 91 g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~~--v~-~lI~~sp~~ 141 (307)
T PRK13604 91 GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EID--LS-FLITAVGVV 141 (307)
T ss_pred cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CCC--CC-EEEEcCCcc
Confidence 678899999999874 3467999999999988654432 111 21 277888875
No 7
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.73 E-value=0.63 Score=48.50 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=41.3
Q ss_pred ehHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHHHH--hhCCCCcEEEEeecccccc
Q 015845 145 RGARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNFR--ALFPVGTKVKCFADAGYFI 207 (399)
Q Consensus 145 rG~~n~~avl~~l~~~--~l-~~a~~vllsG~SAGG~g~~~~~d~v~--~~lp~~~~v~~l~DSG~fl 207 (399)
.|..-.+++|+|+.++ .| +++++|.|.|.||||..+.+|.-.=. .+|. ++|.-||-.+
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~-----raI~~SGs~~ 246 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH-----RAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS-----EEEEES--TT
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccc-----cccccccccc
Confidence 3677789999999973 56 48999999999999999888766521 2232 5666666433
No 8
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=91.48 E-value=1.6 Score=45.03 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=61.8
Q ss_pred cEEEecC-C--CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcccccEEEEecCC
Q 015845 49 AYHFDKG-F--GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCD 125 (399)
Q Consensus 49 ~yy~~~g-~--g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCd 125 (399)
+|++.+. . ...++..||||=|||++.....+.-.... ...-.|. + . .++.+-|=-
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~------------~i~~~l~---~----~---SILvLDYsL 164 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLL------------NIYKLLP---E----V---SILVLDYSL 164 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHH------------HHHHHcC---C----C---eEEEEeccc
Confidence 3777763 1 23468999999999999876555432100 0011111 0 1 566666632
Q ss_pred CCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 126 GASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 126 Gd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
-.+ ++....|+ .+ ..-+-++.+.|.+. ...++|+|.|.||||--++--..++++
T Consensus 165 t~~--~~~~~~yP-tQ-----L~qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 165 TSS--DEHGHKYP-TQ-----LRQLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred ccc--ccCCCcCc-hH-----HHHHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 210 01111121 11 22344566777731 235889999999999998888888876
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=91.20 E-value=0.27 Score=53.68 Aligned_cols=109 Identities=20% Similarity=0.195 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVV 226 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~ 226 (399)
..-+.+.+++|.+.++-++++|.++|.|.||+-|++-.-.-- .|. .+++.+|.--+...+.... ..++...-
T Consensus 454 ~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~-----a~~~~~~~~~~~~~~~~~~--~~~~~~~~ 525 (620)
T COG1506 454 LEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFK-----AAVAVAGGVDWLLYFGEST--EGLRFDPE 525 (620)
T ss_pred HHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhh-----eEEeccCcchhhhhccccc--hhhcCCHH
Confidence 345667777777677888889999999999999876443332 221 3334443221111111000 00111010
Q ss_pred hhcCcCcccCcccccCCCCCccccchHHhhccCCCeeeeehhhh
Q 015845 227 ATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYD 270 (399)
Q Consensus 227 ~~~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Filns~YD 270 (399)
...+ -+.. ..+...=.-|-+..+.|++|++||++..|
T Consensus 526 ~~~~----~~~~---~~~~~~~~sp~~~~~~i~~P~LliHG~~D 562 (620)
T COG1506 526 ENGG----GPPE---DREKYEDRSPIFYADNIKTPLLLIHGEED 562 (620)
T ss_pred HhCC----Cccc---ChHHHHhcChhhhhcccCCCEEEEeecCC
Confidence 0000 0111 12223445577889999999999999998
No 10
>PRK10566 esterase; Provisional
Probab=89.79 E-value=0.71 Score=43.13 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
-+.+++++|.+++.-+.++|.|.|.|+||+-++.-
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 35567788876555678999999999999998844
No 11
>PRK10115 protease 2; Provisional
Probab=88.85 E-value=0.55 Score=51.99 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~ 182 (399)
..-+.++.++|.++|+-++++|.+.|.||||+-+..
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~ 540 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV 540 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHH
Confidence 556778899999999999999999999999986543
No 12
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.45 E-value=0.83 Score=41.61 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 148 RVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 148 ~n~~avl~~l~~~--~l-~~a~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
.-+.++++|++++ .+ -++++|+|+|.||||.=++.-+-..++.
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh
Confidence 3577788888863 11 3588999999999999988888888775
No 13
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=84.47 E-value=1.4 Score=46.20 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHH
Q 015845 146 GARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 146 G~~n~~avl~~l~~~--~l-~~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
|..-..++|+|+.++ .+ .++++|.|.|.||||..+.++.-.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 667888999999863 33 589999999999999888776543
No 14
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.75 E-value=4 Score=34.69 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=26.6
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCC-CcEEEEeecccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPV-GTKVKCFADAGY 205 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~-~~~v~~l~DSG~ 205 (399)
..+|+++|+|-||.=|.+-+-++.+..+. ..+++++.=++.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P 104 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAP 104 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCc
Confidence 37899999999998555555555554432 345666655443
No 15
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=83.08 E-value=1.6 Score=40.29 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
..++.+++++..+.--++++|+|.|.|+||..++..+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4567788888864334678999999999999876644
No 16
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=82.92 E-value=1.8 Score=36.36 Aligned_cols=40 Identities=28% Similarity=0.434 Sum_probs=30.0
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
.+...++++++++.. ...++++|+|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 344478888888753 2348999999999999987776444
No 17
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=82.74 E-value=5.3 Score=38.15 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCC
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 193 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~ 193 (399)
.+.++++++..+.--++++|.++|.|+||.-+. .+.-.+|.
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 577888988874434899999999999996664 44445663
No 18
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=82.29 E-value=2.8 Score=41.08 Aligned_cols=42 Identities=21% Similarity=0.140 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhC--C-CccCeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 149 VFQAVMEDLMAKG--M-KNAQNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 149 n~~avl~~l~~~~--l-~~a~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
-+.+++.|+.++. + -++++|+|+|.||||.=+..-+...++.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 3667888888632 3 3689999999999999999999999986
No 19
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=81.10 E-value=7.9 Score=40.18 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
..++++++|.....-+.++|.+.|.|.||+-++.-
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~ 282 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRL 282 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHH
Confidence 34789999886433377899999999999877643
No 20
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=79.49 E-value=23 Score=37.84 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=80.9
Q ss_pred CcEEEecCC-CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE--e
Q 015845 48 PAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--R 122 (399)
Q Consensus 48 ~~yy~~~g~-g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--p 122 (399)
+.||..++. ....+-+++.|.||=-|-+..-=. ..+|- ..+.++ . ++....||+=+ +.++||| |
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l----~elGP-----~rI~~~-~-~P~~~~NP~SW~~~adLvFiDqP 155 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLL----GELGP-----KRIQSG-T-SPSYPDNPGSWLDFADLVFIDQP 155 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhh----hhcCC-----eeeeCC-C-CCCCCCCccccccCCceEEEecC
Confidence 345666663 233578999999998887653211 12232 112211 1 33333688544 4689999 5
Q ss_pred cCCCCccC-CCccccc---CCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhh---CCCCc
Q 015845 123 YCDGASFT-GDVEAVN---PANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRAL---FPVGT 195 (399)
Q Consensus 123 YCdGd~~~-G~~~~~~---~~~~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~---lp~~~ 195 (399)
-=||-+.+ |+....+ .+..+ +...+-+++++-+ ..+...+..|+|.|-||.=...-+..|.+. +...+
T Consensus 156 vGTGfS~a~~~e~~~d~~~~~~D~----~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~ 230 (498)
T COG2939 156 VGTGFSRALGDEKKKDFEGAGKDV----YSFLRLFFDKFPH-YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNV 230 (498)
T ss_pred cccCcccccccccccchhccchhH----HHHHHHHHHHHHH-HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCce
Confidence 66776665 3321111 01111 2345556666664 556668899999999998777777777774 33345
Q ss_pred EEEEeec
Q 015845 196 KVKCFAD 202 (399)
Q Consensus 196 ~v~~l~D 202 (399)
.+..+.+
T Consensus 231 nlssvli 237 (498)
T COG2939 231 NLSSVLI 237 (498)
T ss_pred Eeeeeee
Confidence 5666555
No 21
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=79.22 E-value=4.6 Score=41.30 Aligned_cols=53 Identities=23% Similarity=0.310 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhC-CCccCeEEEEeeChhhHHHHHhhHHHHhh-CC--CCcEEEEeecccc
Q 015845 150 FQAVMEDLMAKG-MKNAQNAVLSGCSAGGLTSILHCDNFRAL-FP--VGTKVKCFADAGY 205 (399)
Q Consensus 150 ~~avl~~l~~~~-l~~a~~vllsG~SAGG~g~~~~~d~v~~~-lp--~~~~v~~l~DSG~ 205 (399)
.+|.+++|.++. =.+|+++++-|.|-||.=+. ..+++. +. .+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa---~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA---EALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHH---HHHHhcccccCCCeeEEEEecCCc
Confidence 567888888643 35899999999999985322 233332 21 2577778888775
No 22
>PLN02408 phospholipase A1
Probab=78.53 E-value=7 Score=40.24 Aligned_cols=64 Identities=14% Similarity=0.232 Sum_probs=40.6
Q ss_pred HHHHHHhCCCc-cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 015845 154 MEDLMAKGMKN-AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (399)
Q Consensus 154 l~~l~~~~l~~-a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (399)
|..|++ ..++ ..+|+++|+|-||-=|.+.+.+++..++....|.++.=++. --|+....++++.
T Consensus 188 I~~ll~-~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP------RVGN~~Fa~~~~~ 252 (365)
T PLN02408 188 IARLLQ-SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP------RVGNRSFRRQLEK 252 (365)
T ss_pred HHHHHH-hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC------CcccHHHHHHHHh
Confidence 344444 2343 34799999999999999999999988764323555554432 2345444555443
No 23
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.17 E-value=18 Score=36.42 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
-++++++.|+.+.=-++.+|.++|-|+||.=+..-.-..-++|
T Consensus 127 flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~f 169 (312)
T COG3509 127 FLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIF 169 (312)
T ss_pred HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccc
Confidence 3678888888643347889999999999965444333333333
No 24
>PLN02442 S-formylglutathione hydrolase
Probab=75.42 E-value=6.1 Score=38.57 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=18.8
Q ss_pred ccCeEEEEeeChhhHHHHHhhH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d 185 (399)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 6688999999999999987554
No 25
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.67 E-value=7.5 Score=37.98 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccccc
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINA 209 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~ 209 (399)
.+.+.|+.|.++.-...++|.|.|+|.||.-+.+-+..+.+++. ++.++.=+|.++..
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~---~iv~LDPa~p~f~~ 152 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLG---RITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccc---eeEEecCCcccccC
Confidence 35556677665311256789999999999988877766555442 35555446655443
No 26
>PLN02802 triacylglycerol lipase
Probab=74.09 E-value=10 Score=40.65 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=36.1
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHH
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 223 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~ 223 (399)
.+|+|+|+|-||-=|.+.+.+++...+....|.++.=++. --|+..+.++++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsP------RVGN~aFA~~~~ 381 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGP------RVGNRAFADRLN 381 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCC------CcccHHHHHHHH
Confidence 4799999999999999999999988764334555554432 234544444443
No 27
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=74.03 E-value=3.8 Score=38.40 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 148 RVFQAVMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a-~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
-+.++++.++.+ .++.. ++..|+|+|.||++|+..+-.--+.|
T Consensus 97 ~l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 97 FLTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred ehhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 355556666554 45533 33999999999999997554433444
No 28
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=72.68 E-value=4.5 Score=39.10 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=19.6
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
+.+++.|+|.|+||..++..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999999877654
No 29
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=72.16 E-value=8.4 Score=35.67 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccc
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 207 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fl 207 (399)
.+.++|+.+.+++ -++++|+|.|.|-||.-|+.-+=.-.+.+ + -++.=||+++
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~---~--gvv~lsG~~~ 141 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPL---A--GVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTS---S--EEEEES---T
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCc---C--EEEEeecccc
Confidence 3455666655544 67789999999999988876543322322 1 2334457664
No 30
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=70.88 E-value=6.5 Score=31.67 Aligned_cols=45 Identities=27% Similarity=0.470 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHh-CCCccCeEEEEeeChh-hHHHHHhhHHHHhhCCCCcE
Q 015845 147 ARVFQAVMEDLMAK-GMKNAQNAVLSGCSAG-GLTSILHCDNFRALFPVGTK 196 (399)
Q Consensus 147 ~~n~~avl~~l~~~-~l~~a~~vllsG~SAG-G~g~~~~~d~v~~~lp~~~~ 196 (399)
.++++.-+++.+++ .+..+++||+.|+|.| |+++ +|...|..++.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~ 66 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGAD 66 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--E
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCC
Confidence 46788888888873 4577899999999997 4433 44555543443
No 31
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=70.81 E-value=13 Score=34.69 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=29.1
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 204 (399)
..+|+|+|+|-||.=|.+.+-.++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4679999999999988888888887763 24456655444
No 32
>PLN02209 serine carboxypeptidase
Probab=70.21 E-value=59 Score=34.25 Aligned_cols=144 Identities=12% Similarity=0.089 Sum_probs=69.6
Q ss_pred CCCcEEEecCC-CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE-
Q 015845 46 SPPAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV- 121 (399)
Q Consensus 46 Sp~~yy~~~g~-g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v- 121 (399)
+-..|+|-+.. ....+-++|.|+||=-|-+..-... .+|--..-++ ...|-. ..-..||+-+ ..|+|||
T Consensus 52 ~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~----e~GP~~~~~~--~~~~~~-~~l~~n~~sW~~~anllfiD 124 (437)
T PLN02209 52 VQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF----ENGPLALKNK--VYNGSV-PSLVSTTYSWTKTANIIFLD 124 (437)
T ss_pred eEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHH----hcCCceeccC--CCCCCc-ccceeCCCchhhcCcEEEec
Confidence 33344443332 1234689999999966665432222 2221110000 000100 1234566433 4688888
Q ss_pred -ecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCc--cCeEEEEeeChhhHHHHHhhHHHHhhCC----CC
Q 015845 122 -RYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKN--AQNAVLSGCSAGGLTSILHCDNFRALFP----VG 194 (399)
Q Consensus 122 -pYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~--a~~vllsG~SAGG~g~~~~~d~v~~~lp----~~ 194 (399)
|-=+|-+++.+... +...+ -....+++.+..++.. +++ ...+.|+|.|-||.=+..-+.+|.+.-. ..
T Consensus 125 qPvGtGfSy~~~~~~-~~~~~--~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 125 QPVGSGFSYSKTPIE-RTSDT--SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred CCCCCCccCCCCCCC-ccCCH--HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 44455554432211 11110 0123444444444432 432 3469999999999777666777765321 13
Q ss_pred cEEEEee
Q 015845 195 TKVKCFA 201 (399)
Q Consensus 195 ~~v~~l~ 201 (399)
..++++.
T Consensus 200 inl~Gi~ 206 (437)
T PLN02209 200 INLQGYV 206 (437)
T ss_pred eeeeeEE
Confidence 4566554
No 33
>PLN02454 triacylglycerol lipase
Probab=68.84 E-value=17 Score=38.08 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=39.1
Q ss_pred HHHHHHHhCCCccC-eEEEEeeChhhHHHHHhhHHHHhhCC--CCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 015845 153 VMEDLMAKGMKNAQ-NAVLSGCSAGGLTSILHCDNFRALFP--VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (399)
Q Consensus 153 vl~~l~~~~l~~a~-~vllsG~SAGG~g~~~~~d~v~~~lp--~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (399)
.|+.|++ ..++.+ +|+++|+|-||.-|.+.+.+++.... ....|.++.=++. --|+..+.++++.
T Consensus 215 ~V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsP------RVGN~~Fa~~~~~ 282 (414)
T PLN02454 215 KIKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSP------QVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCC------cccCHHHHHHHHh
Confidence 3444554 234433 69999999999999999988877532 2234555544332 2344444555543
No 34
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=67.46 E-value=14 Score=32.12 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=22.2
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
...+|+|+|+|.||-=|.+-+-+++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 4578999999999977777777777654
No 35
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=67.44 E-value=5.6 Score=43.74 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHhCCCccCeEEEEeeChhhH
Q 015845 146 GARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGL 178 (399)
Q Consensus 146 G~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~ 178 (399)
...-+-|+-+.|...|+...++++..|.||||+
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhH
Confidence 456778899999999999999999999999996
No 36
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=66.41 E-value=6.1 Score=37.96 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFR 188 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~ 188 (399)
-+++++. -+++++.|+++|+|||+-=++.-.-++|
T Consensus 124 gv~filk-~~~n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 124 GVNFILK-YTENTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred HHHHHHH-hcccceeEEEcccchHHHHHHHHHHHhc
Confidence 3567774 6899999999999999866555444433
No 37
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=65.91 E-value=6.9 Score=37.39 Aligned_cols=32 Identities=31% Similarity=0.495 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++.|+++|+.. +...++|.|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~~-~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVIN-ETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCCC-CCCEEEEEcHHHHHHHHHHc
Confidence 567787777652 34689999999998777654
No 38
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=65.57 E-value=16 Score=35.47 Aligned_cols=66 Identities=21% Similarity=0.253 Sum_probs=40.6
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCC------CCcEEEEee-ccccccccCCCCchhHHHHHHHHHHh
Q 015845 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFP------VGTKVKCFA-DAGYFINAKDVSGASHIEQFYAQVVA 227 (399)
Q Consensus 162 l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp------~~~~v~~l~-DSG~fld~~~~~g~~~~~~~~~~~~~ 227 (399)
...++.|+++|||-||+|--+--..-++-+- +-.+..-+. |+|.+.-.-|++-.+.+..+-.++..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 3578899999999999997665444443221 000112223 88888766666666666666555544
No 39
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=65.14 E-value=12 Score=39.01 Aligned_cols=43 Identities=26% Similarity=0.412 Sum_probs=28.5
Q ss_pred HHHHHHHHHHH---hC---CCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 149 VFQAVMEDLMA---KG---MKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 149 n~~avl~~l~~---~~---l~~a~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
-.+.+.++|++ +. ..++++.+|+|.|.||++|+.-+=.--++|
T Consensus 265 f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 265 FWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 34555566653 12 357889999999999999986544433444
No 40
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=64.37 E-value=7.8 Score=34.83 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=23.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++.|.++|+. --+++|+|||++-+.+.+-
T Consensus 16 vl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 16 VAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 56777777776 5689999999988766554
No 41
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=63.38 E-value=13 Score=36.67 Aligned_cols=64 Identities=19% Similarity=0.246 Sum_probs=40.1
Q ss_pred ehHHHHHHHHHHHHH-------hCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcE--EEEeecccccccc
Q 015845 145 RGARVFQAVMEDLMA-------KGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTK--VKCFADAGYFINA 209 (399)
Q Consensus 145 rG~~n~~avl~~l~~-------~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~--v~~l~DSG~fld~ 209 (399)
.|..--.++||-+.. .|++...+|.+.|.|=||.++..-+ .++..+-++.+ +++.+=.|+-.|.
T Consensus 43 ~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 43 NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 344444455544442 2555668999999999999997554 55555544566 6666655554443
No 42
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=63.09 E-value=8.4 Score=41.03 Aligned_cols=38 Identities=21% Similarity=0.164 Sum_probs=31.3
Q ss_pred ehHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHH
Q 015845 145 RGARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSIL 182 (399)
Q Consensus 145 rG~~n~~avl~~l~~~--~l-~~a~~vllsG~SAGG~g~~~ 182 (399)
-|..-...+|+|..++ .| +++++|-|.|.||||..++.
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT 196 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHH
Confidence 5777888999999973 45 58999999999999987543
No 43
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=62.79 E-value=16 Score=34.18 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccc
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 207 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fl 207 (399)
-++.+++||.++..-++++|-|.|.|-||--|++ ++..+|.=..|..++.|++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 3678999999654446789999999999988886 455566323366667776654
No 44
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=62.72 E-value=16 Score=33.92 Aligned_cols=36 Identities=31% Similarity=0.517 Sum_probs=22.6
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp 192 (399)
.+.++.++++ .. ++.++|.|+|.||+-|.. ++++++
T Consensus 46 ~~~l~~~i~~-~~-~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 46 IAQLEQLIEE-LK-PENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHHh-CC-CCCeEEEEEChHHHHHHH----HHHHhC
Confidence 3444555542 22 233999999999977664 555554
No 45
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=60.77 E-value=4.8 Score=42.84 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=21.1
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDNFR 188 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~v~ 188 (399)
+++++||+|-|+|.+||+++...+.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCC
Confidence 5678999999999999999876543
No 46
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=59.92 E-value=34 Score=31.26 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 203 (399)
.....++.+++. .++ ...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 444455555542 222 2899999999999999888888877 333445566775
No 47
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=58.47 E-value=10 Score=36.58 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCccCeE-EEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNAQNA-VLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a~~v-llsG~SAGG~g~~~~~ 184 (399)
|++.|+++|..--+++ .++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 5677777666433333 7999999999877764
No 48
>PLN03037 lipase class 3 family protein; Provisional
Probab=57.13 E-value=33 Score=37.04 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=37.5
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (399)
+..+|+|+|+|-||-=|.+++-+++..+|....|.++.=++. --|+....++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsP------RVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAP------RVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCC------CccCHHHHHHHHh
Confidence 456799999999999999999999988774324555543332 2355554555543
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=57.05 E-value=19 Score=34.73 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
.-+.+++++|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 457888888875 344557899999999999887764
No 50
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=56.08 E-value=17 Score=34.60 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHh---CCCccCeEEEEeeChhhHHHHHh
Q 015845 149 VFQAVMEDLMAK---GMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 149 n~~avl~~l~~~---~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
-+...++.+++. .....++|+|.|+|.||+-+-.-
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~ 102 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSA 102 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHH
Confidence 344555666542 34688999999999999865543
No 51
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=55.86 E-value=34 Score=33.51 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
+.+.++++.|....-....+++|.|.|.||.-++..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 457778888775321123469999999999877643
No 52
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=55.86 E-value=13 Score=35.86 Aligned_cols=31 Identities=29% Similarity=0.176 Sum_probs=20.5
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
|++.|++++...... .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 456667666322222 3999999999887654
No 53
>PHA02857 monoglyceride lipase; Provisional
Probab=55.71 E-value=62 Score=30.46 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=16.3
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 015845 165 AQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d 185 (399)
.+.++|.|.|.||.=++..+.
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHH
Confidence 456999999999987665543
No 54
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=54.87 E-value=14 Score=35.63 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCccCe-EEEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNAQN-AVLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a~~-vllsG~SAGG~g~~~~~ 184 (399)
|++-|+++|..-..+ -.++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 567777666543332 48999999999877544
No 55
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=53.54 E-value=1.4e+02 Score=31.80 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=87.4
Q ss_pred CCCCcEEEecCC-CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE
Q 015845 45 GSPPAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV 121 (399)
Q Consensus 45 GSp~~yy~~~g~-g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v 121 (399)
|..-.|||-+.. ...++-+||-|.||=-|-+.. -....+|-.. +...|- .-..||+=| ..|++||
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~----G~~~E~GPf~-----v~~~G~---tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG----GLFEENGPFR-----VKYNGK---TLYLNPYSWNKEANILFL 123 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchh----hhhhhcCCeE-----EcCCCC---cceeCCccccccccEEEE
Confidence 555567775542 123355999999999998764 1223344221 112222 345576322 4678888
Q ss_pred --ecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHhhCC----C
Q 015845 122 --RYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFP----V 193 (399)
Q Consensus 122 --pYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~--~a~~vllsG~SAGG~g~~~~~d~v~~~lp----~ 193 (399)
|==+|-+++.+... +. ..-.....++..+.++|+.. ++ .-....++|.|-+|.=+..-++.|.+.=. .
T Consensus 124 d~PvGvGFSYs~~~~~-~~-~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSD-YK-TGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred ecCCcCCccccCCCCc-Cc-CCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 55666666665431 11 22223457899999999984 44 34689999999999888888888877532 1
Q ss_pred CcEEEEeecc
Q 015845 194 GTKVKCFADA 203 (399)
Q Consensus 194 ~~~v~~l~DS 203 (399)
...+++++=.
T Consensus 200 ~iNLkG~~IG 209 (454)
T KOG1282|consen 200 NINLKGYAIG 209 (454)
T ss_pred cccceEEEec
Confidence 3566666543
No 56
>PLN02324 triacylglycerol lipase
Probab=52.54 E-value=47 Score=34.90 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 152 AVMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 152 avl~~l~~~~l~~a-~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
+-|..|++ ..++. .+|++||+|-||-=|.+.+-+|...
T Consensus 201 ~eV~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 201 GELKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 33444554 34544 4799999999999998888877653
No 57
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=52.16 E-value=21 Score=37.85 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHh
Q 015845 149 VFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 149 n~~avl~~l~~~--~l-~~a~~vllsG~SAGG~g~~~~ 183 (399)
-..++|+|+..+ .| +++++|.|.|.||||..+-++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 566788888863 44 599999999999999887543
No 58
>PRK11460 putative hydrolase; Provisional
Probab=52.14 E-value=22 Score=33.62 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 150 ~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
+.++++++..+.--+.++|+|.|.|.||.-++..
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~ 120 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEA 120 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHH
Confidence 3445555554322356889999999999988753
No 59
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=52.04 E-value=33 Score=33.61 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
-+.+++++|.+. ..++|+|.|.|.||.=++..+
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHH
Confidence 355667777653 256899999999998877543
No 60
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=50.94 E-value=19 Score=35.45 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCC---------CccCeEEEEeeChhhHHHHHhhHHHH
Q 015845 148 RVFQAVMEDLMAKGM---------KNAQNAVLSGCSAGGLTSILHCDNFR 188 (399)
Q Consensus 148 ~n~~avl~~l~~~~l---------~~a~~vllsG~SAGG~g~~~~~d~v~ 188 (399)
+.++++++||.+ ++ .+.++|-|+|+|+||-.++..+-..+
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 357889999885 33 25579999999999998876555543
No 61
>PLN02310 triacylglycerol lipase
Probab=50.36 E-value=46 Score=34.88 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=29.7
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 204 (399)
..+|++||+|-||-=|.+.+..++..++ ...|.++.=++
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~-~~~v~vyTFGs 246 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIP-DLFVSVISFGA 246 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCc-CcceeEEEecC
Confidence 3579999999999999999988887766 34455555444
No 62
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=50.30 E-value=54 Score=28.38 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=24.7
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (399)
++++|.|+|.||.-++..+.. .|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR----YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH----SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccc----cccccccceeeccccc
Confidence 689999999999877765543 4443443445565554
No 63
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=48.96 E-value=22 Score=32.63 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
...+++++++|.+..-...++|.+.|.|.||.-++..
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~ 115 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLL 115 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhh
Confidence 4456677888885433478999999999999888753
No 64
>PLN00021 chlorophyllase
Probab=47.26 E-value=24 Score=35.33 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=26.9
Q ss_pred HHHHHHHHHHh---C-----CCccCeEEEEeeChhhHHHHHhhHHHH
Q 015845 150 FQAVMEDLMAK---G-----MKNAQNAVLSGCSAGGLTSILHCDNFR 188 (399)
Q Consensus 150 ~~avl~~l~~~---~-----l~~a~~vllsG~SAGG~g~~~~~d~v~ 188 (399)
..++++|+.+. - -.+.+++.|.|+|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45666766641 1 134588999999999999887664443
No 65
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=46.08 E-value=51 Score=33.35 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC-CCcEEEEeeccccccccCCCCchhHHHHHHHHH
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP-VGTKVKCFADAGYFINAKDVSGASHIEQFYAQV 225 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp-~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~ 225 (399)
.-+++.++.|++ .++ --+|++||+|.||-=|.+-+.++...-. ...+|+++.=++ +-.|+....+.++..
T Consensus 155 ~~~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~~ 225 (336)
T KOG4569|consen 155 SGLDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDEL 225 (336)
T ss_pred HHHHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHhh
Confidence 346677777775 345 5579999999999877777777776543 234566665443 334555555555543
No 66
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=45.87 E-value=60 Score=31.03 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=39.4
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC---CCcEEEEeecc
Q 015845 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP---VGTKVKCFADA 203 (399)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp---~~~~v~~l~DS 203 (399)
.|..++.+.|+... ...+.|+|.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 57777777777433 366789999999999999998888887432 23455555553
No 67
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=45.31 E-value=25 Score=34.77 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh--hCCC
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPV 193 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~--~lp~ 193 (399)
..=++.+|.+|.++ -+-+++=+.|+|+||+|...+.-.... .||+
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 44578999999963 334456688999999998877666653 4774
No 68
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.11 E-value=32 Score=32.87 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v 187 (399)
...+++++++|..+...++++|.++|.|.||.=|++.+...
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 45688999999975557889999999999998877755443
No 69
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=44.74 E-value=47 Score=29.31 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.3
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
..++++|.|.|+||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 34679999999999888776554
No 70
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=44.67 E-value=57 Score=31.85 Aligned_cols=60 Identities=27% Similarity=0.282 Sum_probs=36.6
Q ss_pred eehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH--HhhCCCCcEEEEeecccccc
Q 015845 144 FRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF--RALFPVGTKVKCFADAGYFI 207 (399)
Q Consensus 144 frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v--~~~lp~~~~v~~l~DSG~fl 207 (399)
.+-..=+++||..|.++ -.-+++=+.|+|.||++++...-.- ...+|+ + -+++.=+|.|-
T Consensus 83 ~~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~-l-~K~V~Ia~pfn 144 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPK-L-NKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-E-E-EEEEEES--TT
T ss_pred HHHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcc-c-ceEEEeccccC
Confidence 34455688899999863 3567899999999999987544332 223664 2 24455566654
No 71
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=43.71 E-value=28 Score=31.48 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=21.3
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
-|++.|.++++.- =+++|.|||++=+.+.+
T Consensus 16 Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 16 GALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 4667777665543 68999999998765544
No 72
>PLN02965 Probable pheophorbidase
Probab=43.71 E-value=55 Score=30.64 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=23.1
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 015845 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (399)
Q Consensus 162 l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 203 (399)
++..++++|.|+|.||.=+...+. ..|..++-.++.++
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAA 105 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHHH----hCchheeEEEEEcc
Confidence 433368999999999975554332 34544443444444
No 73
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=43.70 E-value=21 Score=39.36 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=30.7
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHH
Q 015845 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLT 179 (399)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g 179 (399)
++..-+.+..++|.++|+-.++++-+.|.||||+=
T Consensus 528 N~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred ccHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 34556888999999999999999999999999974
No 74
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=43.18 E-value=65 Score=31.02 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=18.6
Q ss_pred CCccCeEEEEeeChhhHHHHHhhH
Q 015845 162 MKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 162 l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
+...++++|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434588999999999997666553
No 75
>PRK10673 acyl-CoA esterase; Provisional
Probab=42.56 E-value=51 Score=30.28 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=22.8
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 204 (399)
.++++|.|+|.||.-++..+.. .|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~----~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTAL----APDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHh----CHhhcceEEEEecC
Confidence 3569999999999877765533 44333334444544
No 76
>PRK10349 carboxylesterase BioH; Provisional
Probab=41.94 E-value=60 Score=30.14 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 204 (399)
....+++.+.+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+.
T Consensus 62 ~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~ 108 (256)
T PRK10349 62 ADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASS 108 (256)
T ss_pred HHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCc
Confidence 34455555422 367999999999998775443 344434434445654
No 77
>PLN02571 triacylglycerol lipase
Probab=41.68 E-value=51 Score=34.61 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=22.7
Q ss_pred CCccC-eEEEEeeChhhHHHHHhhHHHHhh
Q 015845 162 MKNAQ-NAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 162 l~~a~-~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
+++.+ +|+++|+|-||.=|.+.+..++..
T Consensus 221 y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 221 YKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred cCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 44433 699999999998888888888753
No 78
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=41.04 E-value=60 Score=34.39 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHh-CCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCc-EEEEeeccccccc
Q 015845 149 VFQAVMEDLMAK-GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGT-KVKCFADAGYFIN 208 (399)
Q Consensus 149 n~~avl~~l~~~-~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~-~v~~l~DSG~fld 208 (399)
.+.+.|++|... ++ ..++|.|.|+|.||.-+..-.. ++|..+ ++.++.=+|.++.
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCccc
Confidence 455667777642 33 5688999999999987776543 344322 3555544665544
No 79
>PLN00413 triacylglycerol lipase
Probab=40.81 E-value=42 Score=35.88 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
..+++++. ..++. +|+++|+|.||-=|.+.+..++.
T Consensus 272 ~~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 272 RHLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 34444553 24444 59999999999888888877664
No 80
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=40.29 E-value=70 Score=29.52 Aligned_cols=35 Identities=20% Similarity=0.105 Sum_probs=22.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 203 (399)
.++++|.|.|.||.-++..+ ...|..++..++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLA----LDGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHH----HhCCcccceEEEEcC
Confidence 36789999999998877654 344533333333443
No 81
>KOG3101 consensus Esterase D [General function prediction only]
Probab=40.20 E-value=11 Score=36.32 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHH----hCCC-ccCeEEEEeeChhhHHHHH
Q 015845 148 RVFQAVMEDLMA----KGMK-NAQNAVLSGCSAGGLTSIL 182 (399)
Q Consensus 148 ~n~~avl~~l~~----~~l~-~a~~vllsG~SAGG~g~~~ 182 (399)
+...-|.++|.+ ..++ ++.++-++|+|+||.||+.
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 334444555543 2333 5567899999999999875
No 82
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=39.26 E-value=39 Score=36.22 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
..-+.++|+||..+...+ .+|.+.|.|.||.-+++-+
T Consensus 79 ~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred chHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 345789999998754444 6899999999997766543
No 83
>PLN02719 triacylglycerol lipase
Probab=38.53 E-value=57 Score=35.18 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=23.1
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
..+|+++|+|-||-=|.+.+.++++.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999875
No 84
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=38.33 E-value=36 Score=35.68 Aligned_cols=30 Identities=27% Similarity=0.622 Sum_probs=21.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++.|.++|+.- + +++|+|||++-+.+.+.
T Consensus 91 VLkaL~E~gl~p-~--vIsGTSaGAivAal~as 120 (421)
T cd07230 91 VLKALFEANLLP-R--IISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 557777677753 2 79999999988766553
No 85
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.32 E-value=35 Score=33.17 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=20.0
Q ss_pred HHHHHHHhCCC-ccCeEEEEeeChhhHHHHHh
Q 015845 153 VMEDLMAKGMK-NAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 153 vl~~l~~~~l~-~a~~vllsG~SAGG~g~~~~ 183 (399)
|++.|++++.. -.+--.++|+|||++-+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 45666665532 11135688999999987753
No 86
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=37.80 E-value=63 Score=28.59 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 015845 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (399)
Q Consensus 150 ~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (399)
++.+.+++... +. ++++|.|.|.||.-++..+. ..|..++-.++.+++..
T Consensus 52 ~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 52 LADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 45566666642 22 67999999999987765443 33432333344455443
No 87
>PRK04940 hypothetical protein; Provisional
Probab=36.92 E-value=59 Score=30.23 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=18.6
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCC
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRALFP 192 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~lp 192 (399)
+.++|.|+|-|| +++-++.+++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 569999999999 56677777764
No 88
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=36.59 E-value=53 Score=29.54 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=16.8
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 015845 165 AQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d 185 (399)
.++++|.|.|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987776544
No 89
>PLN02753 triacylglycerol lipase
Probab=36.15 E-value=66 Score=34.83 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=35.1
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhh-CCC-----CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~-lp~-----~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (399)
..+|++||+|-||-=|.+.+.+++.. +++ ...|.++.=++ +--|+....++++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~~ 370 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRMEE 370 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHHh
Confidence 46899999999999999999888864 321 13355554333 23355555555543
No 90
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=35.77 E-value=59 Score=30.78 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=22.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 204 (399)
.++++|.|.|.||.=++.-+- ..|..++-.++.++.
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~----~~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAH----DYPERCKKLILAATA 125 (276)
T ss_pred cCceEEEEECHHHHHHHHHHH----HCHHHhhheEEeccC
Confidence 356999999999987665443 333333334444543
No 91
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.25 E-value=45 Score=31.55 Aligned_cols=30 Identities=30% Similarity=0.531 Sum_probs=21.3
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
-|++.|.++|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 356666666653 2 36999999999876655
No 92
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=35.10 E-value=52 Score=29.36 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
--+++.|.++++. . =+++|.|||++-+.+.+
T Consensus 16 ~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 16 IGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 4466777766653 3 48999999999876655
No 93
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=35.04 E-value=88 Score=32.17 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=17.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHH
Q 015845 165 AQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~ 186 (399)
.++++|.|+|.||+-++..+-.
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 3579999999999987765543
No 94
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.97 E-value=29 Score=29.97 Aligned_cols=19 Identities=42% Similarity=0.461 Sum_probs=14.1
Q ss_pred eEEEEeeChhhHHHHHhhH
Q 015845 167 NAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 167 ~vllsG~SAGG~g~~~~~d 185 (399)
--+++|+||||+-+.+.+-
T Consensus 28 ~d~i~GtS~Gal~a~~~~~ 46 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLAL 46 (204)
T ss_dssp -SEEEEECCHHHHHHHHHT
T ss_pred ccEEEEcChhhhhHHHHHh
Confidence 3469999999998855443
No 95
>PLN02162 triacylglycerol lipase
Probab=34.66 E-value=65 Score=34.41 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
++.+++++.+ .+ -.++++||+|-||-=|.+.+..++.
T Consensus 265 ~~~L~~lL~k-~p-~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 265 RQMLRDKLAR-NK-NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHh-CC-CceEEEEecChHHHHHHHHHHHHHH
Confidence 3344444432 33 3479999999999888888777764
No 96
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.38 E-value=55 Score=29.41 Aligned_cols=28 Identities=29% Similarity=0.528 Sum_probs=19.4
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
+++.|.++++. -=+++|.|||++-+.+.
T Consensus 18 vl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 18 VLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 55666666653 35899999999855443
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=34.20 E-value=71 Score=33.75 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
.+++.++.+.++ ...++|+|.|+|+||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 344444444431 2357899999999998877544
No 98
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=33.74 E-value=49 Score=34.73 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHH
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSI 181 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~ 181 (399)
+-+++||++|.+...=+.++|.+.|-|.||+-++
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 4678999999864333778999999999997664
No 99
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=32.82 E-value=1.2e+02 Score=28.95 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=22.2
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 203 (399)
++++|.|.|.||.=++..+- ..|+.++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~----~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAV----DAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHH----hChhheeEEEEECC
Confidence 77999999999987765443 34443433444454
No 100
>COG0627 Predicted esterase [General function prediction only]
Probab=32.79 E-value=1.4e+02 Score=30.25 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=25.9
Q ss_pred eEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 015845 167 NAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (399)
Q Consensus 167 ~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (399)
+--++|.|.||.||+..+-+--++|+ .+.+.||+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~-----~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFK-----SASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhc-----eeccccccc
Confidence 78999999999999985554445553 556677755
No 101
>PRK00870 haloalkane dehalogenase; Provisional
Probab=32.23 E-value=1.3e+02 Score=28.79 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=23.7
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccc
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 205 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~ 205 (399)
.++|+|.|+|.||.=++.-+. ..|..++-.++.+++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLAA----EHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHHH----hChhheeEEEEeCCCC
Confidence 357999999999976664443 3454444445556654
No 102
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.06 E-value=49 Score=32.72 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=21.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++.|.+.| -+--+++|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 567777655 445689999999987666554
No 103
>PLN02847 triacylglycerol lipase
Probab=31.90 E-value=1.1e+02 Score=33.70 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=18.8
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHh
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
-+|+|+|+|-||-=|.+-+-.+|+
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 479999999998666666777775
No 104
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=31.64 E-value=40 Score=31.59 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=30.9
Q ss_pred ceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHH
Q 015845 141 NLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFR 188 (399)
Q Consensus 141 ~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~ 188 (399)
.+.-.|.+.++++++.+... -....+|++.|+|.||+=+-.-.-.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~-~~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDY-ESKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred hhHHHHHHHHHHHHHhcccc-ccccccceEEEecccHHHHHHHHHHhh
Confidence 45556777777777766642 122468999999999986554444333
No 105
>PF04631 Baculo_44: Baculovirus hypothetical protein; InterPro: IPR006725 This family includes several hypothetical baculoviral proteins, with predicted molecular weights of approximately 44 kDa.
Probab=31.52 E-value=28 Score=35.72 Aligned_cols=50 Identities=20% Similarity=0.462 Sum_probs=35.0
Q ss_pred CCcccCCCCCcEEEecCCCCCCCcEEE---EecccccccCc---hhhhcccCCCCCCcccc
Q 015845 39 GAVCLDGSPPAYHFDKGFGAGINNWLV---HIEGGGWCNNV---TTCLERKKTRLGSSKQM 93 (399)
Q Consensus 39 ga~C~DGSp~~yy~~~g~g~~s~k~lI---~leGGG~C~~~---~tC~~r~~t~~gSs~~~ 93 (399)
.++|.|.|...||+.+. +|++| .|.-||||... ..|......-+.|...|
T Consensus 94 t~iC~n~sA~yf~V~~~-----dkfvvng~~L~~GgYCttnsvPrnCNreTSvvl~slNqW 149 (371)
T PF04631_consen 94 TSICDNPSAVYFFVGEH-----DKFVVNGQRLSPGGYCTTNSVPRNCNRETSVVLHSLNQW 149 (371)
T ss_pred hhhcCCCcceEEEecCC-----ceEEEcCcCccCCccccCCCcccccCccceEEEEcCCcE
Confidence 45899999888888765 67776 58899999763 47883322235566655
No 106
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=31.44 E-value=81 Score=31.38 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=24.4
Q ss_pred CccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeec
Q 015845 163 KNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFAD 202 (399)
Q Consensus 163 ~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~D 202 (399)
.+.+.|+|+|. |+.+..+++++.||+ +++.++.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999874 344668999999995 55555545
No 107
>PLN02934 triacylglycerol lipase
Probab=31.22 E-value=89 Score=33.73 Aligned_cols=38 Identities=26% Similarity=0.381 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 150 ~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
++..|++++++ .++ .+|++||+|-||-=|.+.+..++.
T Consensus 307 v~~~lk~ll~~-~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 307 VRSKLKSLLKE-HKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHH-CCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 55556666653 444 469999999999888888776654
No 108
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=30.01 E-value=52 Score=29.04 Aligned_cols=10 Identities=50% Similarity=0.757 Sum_probs=9.3
Q ss_pred EEEEeeChhh
Q 015845 168 AVLSGCSAGG 177 (399)
Q Consensus 168 vllsG~SAGG 177 (399)
+++.|.|||+
T Consensus 70 ~vi~G~SAGA 79 (154)
T PF03575_consen 70 GVIIGTSAGA 79 (154)
T ss_dssp SEEEEETHHH
T ss_pred CEEEEEChHH
Confidence 7899999999
No 109
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=29.54 E-value=7e+02 Score=26.37 Aligned_cols=115 Identities=15% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEEecC--CCCccCCCcc
Q 015845 59 GINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKVRYC--DGASFTGDVE 134 (399)
Q Consensus 59 ~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~vpYC--dGd~~~G~~~ 134 (399)
..+-++|.|+||=-|-+..-.. ..+|--. +...+ ..-..||.=+ ..|+|||--= +|-++.-...
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f----~E~GP~~-----i~~~~---~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~ 142 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALL----AENGPCL-----MNETT---GDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD 142 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhh----ccCCCeE-----EeCCC---CceeECCcccccccCeEEEeCCCCcCcccCCCCC
Confidence 3467999999997776542111 2233211 11111 1123455222 2567777533 3333321111
Q ss_pred cccCCCceeeehHHHHHHHHHHHHHhCCCc--cCeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 135 AVNPANNLHFRGARVFQAVMEDLMAKGMKN--AQNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 135 ~~~~~~~l~frG~~n~~avl~~l~~~~l~~--a~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
+. ... ..-...+.++|+.+++ .++. -..+.|+|.|.||.=+...+.+|.+.
T Consensus 143 --~~-~~~-~~~a~d~~~~l~~f~~-~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 143 --YD-HNE-SEVSEDMYNFLQAFFG-SHEDLRANDLFVVGESYGGHYAPATAYRINMG 195 (462)
T ss_pred --CC-CCh-HHHHHHHHHHHHHHHH-hCccccCCCEEEEeecchhhhHHHHHHHHHhh
Confidence 11 111 1123334444444443 2443 36899999999998887777777643
No 110
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=29.50 E-value=81 Score=28.43 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=38.1
Q ss_pred CCCCcEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc
Q 015845 45 GSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY 114 (399)
Q Consensus 45 GSp~~yy~~~g~g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~ 114 (399)
|-.|+.|+-.|.....+++-|=++|.||=-|. ..+ |-++.-.+...|.=+.+.++...|+-|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g~-----Giv~~~~eqa~FDVv~DGnQ~V~pD~Y 139 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SGI-----GMVSHSDFTNEFNIYYFGNGDIPVDTY 139 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CCC-----ceEeecccceeEEEEEeCCeecCCCeE
Confidence 44556666556555678999999999998776 222 211111244455556666777777544
No 111
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=29.49 E-value=1.3e+02 Score=30.20 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=39.9
Q ss_pred ceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCC-cEEEEeecccc
Q 015845 141 NLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG-TKVKCFADAGY 205 (399)
Q Consensus 141 ~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~-~~v~~l~DSG~ 205 (399)
.++.....-.-+...+|.+ +.=++.|.|.|+ ++.-+-.+++.++++ .-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLAR------EEGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHH------HhCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 4555566666666777775 346788888886 555567888888744 45888899984
No 112
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=29.42 E-value=65 Score=28.75 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=32.0
Q ss_pred cCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChh
Q 015845 123 YCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAG 176 (399)
Q Consensus 123 YCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAG 176 (399)
|+-+|.|.|..........-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 7788999997542111001111112234667777775 5788999999996543
No 113
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=29.28 E-value=81 Score=27.90 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=16.5
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 015845 165 AQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d 185 (399)
.++|+|.|.|.||.-++..+.
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 367999999999987765543
No 114
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=29.22 E-value=36 Score=35.08 Aligned_cols=17 Identities=35% Similarity=0.470 Sum_probs=15.2
Q ss_pred cCeEEEEeeChhhHHHH
Q 015845 165 AQNAVLSGCSAGGLTSI 181 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~ 181 (399)
.++|.++|+|-||..++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 56899999999998887
No 115
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.20 E-value=61 Score=30.32 Aligned_cols=29 Identities=28% Similarity=0.547 Sum_probs=20.5
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
|++.|.++|+ .--+++|.|||++=+.+.+
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~a 44 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALIA 44 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHHH
Confidence 5666776666 3348999999998655543
No 116
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.87 E-value=67 Score=32.23 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++.|.++++.. + +++|.|||++-+.+.+-
T Consensus 87 vl~aL~e~~l~~-~--~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQDLLP-R--VISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHcCCCC-C--EEEEEcHHHHHHHHHHc
Confidence 445566566642 2 69999999998877664
No 117
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=28.77 E-value=78 Score=28.01 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
--|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 14 ~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 34566677666542 3457899999999888877
No 118
>PLN02761 lipase class 3 family protein
Probab=28.61 E-value=1.1e+02 Score=33.09 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=21.9
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhh
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRAL 190 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~ 190 (399)
-+|+++|+|-||-=|.+.+.+|+..
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~ 318 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAEL 318 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4899999999999999999888764
No 119
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.48 E-value=37 Score=31.86 Aligned_cols=14 Identities=36% Similarity=0.859 Sum_probs=11.3
Q ss_pred eEEEEeeChhhHHH
Q 015845 167 NAVLSGCSAGGLTS 180 (399)
Q Consensus 167 ~vllsG~SAGG~g~ 180 (399)
..+++|||.||+=+
T Consensus 102 s~~~sgcsmGayhA 115 (227)
T COG4947 102 STIVSGCSMGAYHA 115 (227)
T ss_pred Cccccccchhhhhh
Confidence 37899999999544
No 120
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=28.46 E-value=62 Score=32.36 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=23.5
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
-||+.|.++|++ --+++|+|||++=+.+.+-.
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 366777777775 35899999999877665543
No 121
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=28.38 E-value=52 Score=33.11 Aligned_cols=117 Identities=14% Similarity=0.162 Sum_probs=57.0
Q ss_pred CceeeehH-HHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC----
Q 015845 140 NNLHFRGA-RVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV---- 212 (399)
Q Consensus 140 ~~l~frG~-~n~~avl~~l~~~~l~--~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~---- 212 (399)
.+.|||+- ......++.|. .++ ++++|.++|.|-||.=|++-+- |.+.++ .++++--++=|.+..
T Consensus 148 e~~yyr~~~~D~~ravd~l~--slpevD~~rI~v~G~SqGG~lal~~aa-----Ld~rv~-~~~~~vP~l~d~~~~~~~~ 219 (320)
T PF05448_consen 148 EDYYYRRVYLDAVRAVDFLR--SLPEVDGKRIGVTGGSQGGGLALAAAA-----LDPRVK-AAAADVPFLCDFRRALELR 219 (320)
T ss_dssp TT-HHHHHHHHHHHHHHHHH--TSTTEEEEEEEEEEETHHHHHHHHHHH-----HSST-S-EEEEESESSSSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH--hCCCcCcceEEEEeecCchHHHHHHHH-----hCcccc-EEEecCCCccchhhhhhcC
Confidence 46788874 34444556666 466 5789999999999977665433 222221 244454455443210
Q ss_pred ---CchhHHHHHHHHHHhhcCcCcccCcccccCCCCCccccchHHhhccCCCeeeeehhhhH
Q 015845 213 ---SGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYDS 271 (399)
Q Consensus 213 ---~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Filns~YD~ 271 (399)
.+-..+..++...- . .++.-.+-.+.-.=|=..+..+.|+.|+++--++.|.
T Consensus 220 ~~~~~y~~~~~~~~~~d-~------~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~ 274 (320)
T PF05448_consen 220 ADEGPYPEIRRYFRWRD-P------HHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDP 274 (320)
T ss_dssp --STTTHHHHHHHHHHS-C------THCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-S
T ss_pred CccccHHHHHHHHhccC-C------CcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCC
Confidence 11122233333100 0 0000000000011223567889999999999999993
No 122
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=28.34 E-value=2.4e+02 Score=25.73 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=30.0
Q ss_pred eehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 015845 144 FRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 144 frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
..|..++...|++...+ -++ .+++|+|.|-|+.-+......
T Consensus 61 ~~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 45777888888887763 343 489999999999776655444
No 123
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=28.15 E-value=1.3e+02 Score=30.29 Aligned_cols=44 Identities=34% Similarity=0.446 Sum_probs=29.1
Q ss_pred eeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 015845 142 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (399)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp 192 (399)
..=+|....+-|-+-|. ...+++|.|.|+|+||.-+. ++...++
T Consensus 106 ~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 34455554444444444 35679999999999998887 5555555
No 124
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=28.02 E-value=1.3e+02 Score=31.34 Aligned_cols=77 Identities=17% Similarity=0.262 Sum_probs=48.1
Q ss_pred eeeehHHHHHHHHHHHHHhCCC-ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHH
Q 015845 142 LHFRGARVFQAVMEDLMAKGMK-NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQ 220 (399)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~-~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~ 220 (399)
.-+.-..-++||+..... .++ ..+.|||-|.|-||+-+. +.+..+| +++ -++-|+-| =|.-+. .-..|+.
T Consensus 287 ~p~n~~nA~DaVvQfAI~-~Lgf~~edIilygWSIGGF~~~----waAs~YP-dVk-avvLDAtF-DDllpL-Al~rMP~ 357 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQ-VLGFRQEDIILYGWSIGGFPVA----WAASNYP-DVK-AVVLDATF-DDLLPL-ALFRMPT 357 (517)
T ss_pred CcccchHHHHHHHHHHHH-HcCCCccceEEEEeecCCchHH----HHhhcCC-Cce-EEEeecch-hhhhhH-HhhhchH
Confidence 334456678888888885 454 567899999999998765 5667788 343 22346643 222211 1234567
Q ss_pred HHHHHHh
Q 015845 221 FYAQVVA 227 (399)
Q Consensus 221 ~~~~~~~ 227 (399)
+|.++|+
T Consensus 358 ~~~giV~ 364 (517)
T KOG1553|consen 358 FFSGIVE 364 (517)
T ss_pred HHHHHHH
Confidence 7877764
No 125
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=27.88 E-value=1.7e+02 Score=27.35 Aligned_cols=49 Identities=14% Similarity=0.304 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHh--CCCccCeEEEEeeChhhHHH---HHhhHHHHhhCCCC
Q 015845 146 GARVFQAVMEDLMAK--GMKNAQNAVLSGCSAGGLTS---ILHCDNFRALFPVG 194 (399)
Q Consensus 146 G~~n~~avl~~l~~~--~l~~a~~vllsG~SAGG~g~---~~~~d~v~~~lp~~ 194 (399)
|...++.+++.+.+. ..+..+-++|.-+-+||.|+ .+-++.+++.+|..
T Consensus 103 ~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 103 GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred ccccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 444778888887752 34889999999888888774 56688889999853
No 126
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=27.87 E-value=1.2e+02 Score=31.28 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCC
Q 015845 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG 194 (399)
Q Consensus 151 ~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~ 194 (399)
++.++||.++|+. ++-|+|-|.||. ++.-.....|+.
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~p 199 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRP 199 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCc
Confidence 4567899876554 799999999995 444555666653
No 127
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.20 E-value=76 Score=32.28 Aligned_cols=30 Identities=20% Similarity=0.404 Sum_probs=21.4
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++-|.++|+.. -+++|+|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHc
Confidence 456666667743 259999999998776654
No 128
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=26.71 E-value=98 Score=32.79 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=36.9
Q ss_pred CceeeehHHHHHHHHHHHH-------HhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCC
Q 015845 140 NNLHFRGARVFQAVMEDLM-------AKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 193 (399)
Q Consensus 140 ~~l~frG~~n~~avl~~l~-------~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~ 193 (399)
+...|-|+.+.+.+|+|.. +.--.++..||+.|.|-|| +-+.++|-.+|.
T Consensus 134 k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWfRlKYPH 190 (492)
T KOG2183|consen 134 KDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWFRLKYPH 190 (492)
T ss_pred cChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh----HHHHHHHhcChh
Confidence 3566788888888776543 2222467899999999999 667788888884
No 129
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.68 E-value=71 Score=30.68 Aligned_cols=30 Identities=23% Similarity=0.471 Sum_probs=21.2
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~ 183 (399)
-||+.|.++++. .==+++|.|||++=+.+.
T Consensus 15 Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 15 GVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 356777766665 223889999999876654
No 130
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=26.49 E-value=72 Score=29.45 Aligned_cols=26 Identities=19% Similarity=0.498 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeCh
Q 015845 150 FQAVMEDLMAKGMKNAQNAVLSGCSA 175 (399)
Q Consensus 150 ~~avl~~l~~~~l~~a~~vllsG~SA 175 (399)
+++++++|+++.--++.++++.|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67899999987666788999999994
No 131
>PRK10279 hypothetical protein; Provisional
Probab=26.49 E-value=71 Score=31.93 Aligned_cols=29 Identities=28% Similarity=0.545 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
||+.|.+.|++ --+++|+|||++=+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 56777777775 368999999998766655
No 132
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=26.36 E-value=25 Score=34.16 Aligned_cols=43 Identities=26% Similarity=0.246 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
--+++|++|..+-.-+-++++|.|-|-||.-|+.-+...++++
T Consensus 132 Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri 174 (300)
T KOG4391|consen 132 DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRI 174 (300)
T ss_pred cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhe
Confidence 3689999999765556678999999999966655554444443
No 133
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=26.28 E-value=67 Score=34.67 Aligned_cols=109 Identities=19% Similarity=0.212 Sum_probs=64.1
Q ss_pred EEEecCCCCccCCCccc-ccCC---------------------Cceee---------ehHHHHHHHHHHHHHh--CC-Cc
Q 015845 119 IKVRYCDGASFTGDVEA-VNPA---------------------NNLHF---------RGARVFQAVMEDLMAK--GM-KN 164 (399)
Q Consensus 119 V~vpYCdGd~~~G~~~~-~~~~---------------------~~l~f---------rG~~n~~avl~~l~~~--~l-~~ 164 (399)
|.|.-=-|..++|..+- .|.+ .=||+ +|..-=+-+|.|+.++ -| ++
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGn 216 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGN 216 (601)
T ss_pred EEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCC
Confidence 77777788888987653 2321 12344 4666667788888863 34 58
Q ss_pred cCeEEEEeeChhhHHHHHhhH--HHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHhhcCcC
Q 015845 165 AQNAVLSGCSAGGLTSILHCD--NFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSA 232 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d--~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~~~ 232 (399)
+++|-|.|.|||+-.+.+|.= --|.++ -++|.-||-+-+.-.+.+...+++.-..+.++-|+.
T Consensus 217 p~~vTLFGESAGaASv~aHLlsP~S~glF-----~raIlQSGS~~~pWA~~s~~~A~~~s~~La~lvgC~ 281 (601)
T KOG4389|consen 217 PSRVTLFGESAGAASVVAHLLSPGSRGLF-----HRAILQSGSLNNPWAIVSPGEARQRSTALANLVGCN 281 (601)
T ss_pred cceEEEeccccchhhhhheecCCCchhhH-----HHHHhhcCCCCCCccccChHHHHHHHHHHHHHhCCC
Confidence 999999999999987776631 111112 134555665544433333333333333455555554
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=25.90 E-value=1.2e+02 Score=30.64 Aligned_cols=56 Identities=16% Similarity=0.225 Sum_probs=38.3
Q ss_pred HHHHHHHHH-hCCCccCeEEEEeeChhhHHHHHhhHHHHh--hCCCCcEEEEeeccccccccC
Q 015845 151 QAVMEDLMA-KGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPVGTKVKCFADAGYFINAK 210 (399)
Q Consensus 151 ~avl~~l~~-~~l~~a~~vllsG~SAGG~g~~~~~d~v~~--~lp~~~~v~~l~DSG~fld~~ 210 (399)
-..|+.|.. .++ ..++|-|.|+|-||--+-+-..++.. +++ ++.+|.=||.++...
T Consensus 135 a~~l~~L~~~~g~-~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~---rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 135 AKFLSFLINNFGV-PPENIHLIGHSLGAHVAGFAGKYLKGGGKIG---RITGLDPAGPLFENN 193 (331)
T ss_dssp HHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---SS---EEEEES-B-TTTTTS
T ss_pred HHHHHHHHhhcCC-ChhHEEEEeeccchhhhhhhhhhccCcceee---EEEecCcccccccCC
Confidence 334555553 344 47889999999999988888888887 553 689998899887654
No 135
>PLN02872 triacylglycerol lipase
Probab=25.53 E-value=1.2e+02 Score=31.52 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=28.5
Q ss_pred eeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 015845 142 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (399)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~ 182 (399)
++-.+..-+.|+++++++. . .++|.+.|+|.||.-++.
T Consensus 139 ~~e~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~~ 176 (395)
T PLN02872 139 WQELALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSLA 176 (395)
T ss_pred HHHHHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHHH
Confidence 3444556789999999853 2 368999999999987653
No 136
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=25.51 E-value=98 Score=29.45 Aligned_cols=68 Identities=15% Similarity=0.159 Sum_probs=38.9
Q ss_pred cccccEEEEecCCCCccCCCccc-ccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHH
Q 015845 113 FYNWNRIKVRYCDGASFTGDVEA-VNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSI 181 (399)
Q Consensus 113 f~nwN~V~vpYCdGd~~~G~~~~-~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~ 181 (399)
|..--.||-||=-......-... ........=-++.-+++++++.+. +..+-.-+||+|+|-|+.-..
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~l~ 110 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMHLL 110 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHHHH
Confidence 44455566665443332222100 011122233456677888888775 566667899999999985443
No 137
>PRK10749 lysophospholipase L2; Provisional
Probab=25.24 E-value=2.1e+02 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=16.8
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 015845 165 AQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d 185 (399)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999987765544
No 138
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=24.73 E-value=99 Score=28.89 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=18.4
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDN 186 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~ 186 (399)
..++++|.|.|.||.=++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 44689999999999888876643
No 139
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=24.72 E-value=1.7e+02 Score=29.60 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=21.0
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCCC
Q 015845 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 193 (399)
Q Consensus 162 l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~ 193 (399)
..+.++|+|+|.+|- +..++|++.||+
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999997763 356999999984
No 140
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.62 E-value=99 Score=30.45 Aligned_cols=92 Identities=23% Similarity=0.350 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVV 226 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~ 226 (399)
+.-++||.++|.+. .++.++|+|-|.|.|..-++ +++.+.|- +-| +-.|.| .+|- +..++.
T Consensus 112 y~Di~avye~Lr~~-~g~~~~Iil~G~SiGt~~tv----~Lasr~~~-~al--VL~SPf------~S~~---rv~~~~-- 172 (258)
T KOG1552|consen 112 YADIKAVYEWLRNR-YGSPERIILYGQSIGTVPTV----DLASRYPL-AAV--VLHSPF------TSGM---RVAFPD-- 172 (258)
T ss_pred hhhHHHHHHHHHhh-cCCCceEEEEEecCCchhhh----hHhhcCCc-ceE--EEeccc------hhhh---hhhccC--
Confidence 45689999999973 44889999999999986633 44555551 212 222221 1221 111111
Q ss_pred hhcCcCcccCcccccCCCCCccccc-hHHhhccCCCeeeeehhhhH
Q 015845 227 ATHGSAKHLPASCTSRLSPGLCFFP-QYMARQITTPLFIINAAYDS 271 (399)
Q Consensus 227 ~~~~~~~~lp~~C~~~~~~~~C~f~-~~~~~~i~tP~Filns~YD~ 271 (399)
+... .|.-.|+ ..-++.|+.|+.|+++-=|.
T Consensus 173 -------------~~~~-~~~d~f~~i~kI~~i~~PVLiiHgtdDe 204 (258)
T KOG1552|consen 173 -------------TKTT-YCFDAFPNIEKISKITCPVLIIHGTDDE 204 (258)
T ss_pred -------------cceE-EeeccccccCcceeccCCEEEEecccCc
Confidence 1111 1111233 56688899999999998885
No 141
>PRK11071 esterase YqiA; Provisional
Probab=23.76 E-value=1.4e+02 Score=27.22 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
.+.+.+++++++ ++ .++++|.|.|.||.=++.-+
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 355566666652 32 35799999999998776543
No 142
>COG4099 Predicted peptidase [General function prediction only]
Probab=23.54 E-value=95 Score=31.63 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~~l 191 (399)
-++.+.+.|.+.---+-.+|.++|-|-||+|++.-...+-+.|
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhh
Confidence 4556666677632235578999999999999997655544444
No 143
>PRK10985 putative hydrolase; Provisional
Probab=23.47 E-value=1.3e+02 Score=29.70 Aligned_cols=33 Identities=15% Similarity=0.045 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~ 182 (399)
..+.++++++.++ ++ .+++++.|.|.||.=+..
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHH
Confidence 4577788888853 33 356999999999964443
No 144
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=23.45 E-value=1.2e+02 Score=30.53 Aligned_cols=65 Identities=20% Similarity=0.229 Sum_probs=45.7
Q ss_pred eeehHHHHHHHHHHHHHh------CCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC
Q 015845 143 HFRGARVFQAVMEDLMAK------GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 212 (399)
Q Consensus 143 ~frG~~n~~avl~~l~~~------~l~~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~ 212 (399)
+|.=..-++.+.++|++. -.+.++.=+|+|.|-||+.+++-.-.-=++| =.+++=||.|.+.+.-
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~F-----G~V~s~Sps~~~~~~~ 218 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERF-----GHVLSQSGSFWWTPLD 218 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhh-----ceeeccCCccccCccc
Confidence 335555678888888852 2356788899999999999887554433444 3677888988877653
No 145
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=23.35 E-value=4.3e+02 Score=27.76 Aligned_cols=132 Identities=14% Similarity=0.086 Sum_probs=63.8
Q ss_pred CCCcEEEecC-CCCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEEe
Q 015845 46 SPPAYHFDKG-FGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKVR 122 (399)
Q Consensus 46 Sp~~yy~~~g-~g~~s~k~lI~leGGG~C~~~~tC~~r~~t~~gSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~vp 122 (399)
+.-.|+|-+. .....+-++|.|+||=-|-+..-... .+|--..-.+... | -...-..||.=+ ..|++||=
T Consensus 50 ~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~----e~GP~~~~~~~~~--~-~~~~l~~n~~sW~~~anllfiD 122 (433)
T PLN03016 50 VQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIF----ENGPVGLKFEVFN--G-SAPSLFSTTYSWTKMANIIFLD 122 (433)
T ss_pred eEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHH----hcCCceeeccccC--C-CCCceeeCCCchhhcCcEEEec
Confidence 3344555332 12345789999999966666533332 2222110000000 1 001224455322 36788884
Q ss_pred --cCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 123 --YCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 123 --YCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~--~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
-=+|-+++-+... +.+ .. -....+.+.+..++.. ++ ....+.|+|.|-||.=+..-+.+|.+
T Consensus 123 qPvGtGfSy~~~~~~-~~~-d~-~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 123 QPVGSGFSYSKTPID-KTG-DI-SEVKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred CCCCCCccCCCCCCC-ccC-CH-HHHHHHHHHHHHHHHh--ChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 3334443322110 110 10 1113444555555542 33 24569999999999777666666654
No 146
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=22.96 E-value=2e+02 Score=28.61 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=24.1
Q ss_pred Ce-EEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 015845 166 QN-AVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (399)
Q Consensus 166 ~~-vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (399)
++ ++|.|.|.||.=++..+-. .|..++-.++.|++..
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSAR 163 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCc
Confidence 45 9999999999777665544 3433333455666544
No 147
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=22.82 E-value=1.5e+02 Score=26.17 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 015845 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (399)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v 187 (399)
..-+.+.++.+++ .++..+ +.+.|.|.||.=++..+..-
T Consensus 27 ~~~~~~~~~~~~~-~l~~~~-~~~vG~S~Gg~~~~~~a~~~ 65 (230)
T PF00561_consen 27 TDDLAADLEALRE-ALGIKK-INLVGHSMGGMLALEYAAQY 65 (230)
T ss_dssp HHHHHHHHHHHHH-HHTTSS-EEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-HhCCCC-eEEEEECCChHHHHHHHHHC
Confidence 3345555555664 233333 99999999998777665443
No 148
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.34 E-value=1.3e+02 Score=29.45 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=23.2
Q ss_pred ehHHHHHHHHHHHHHhCCCccC--eEEEEeeChhhHHHHHhh
Q 015845 145 RGARVFQAVMEDLMAKGMKNAQ--NAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~--~vllsG~SAGG~g~~~~~ 184 (399)
|| ..--.+|+.|.+++ ++.. ==+++|.||||+=+...+
T Consensus 13 RG-i~~~~vL~~Le~~~-~~~~~~fD~i~GTSaGaiia~~la 52 (288)
T cd07213 13 KG-IVQLVLLKRLAEEF-PSFLDQIDLFAGTSAGSLIALGLA 52 (288)
T ss_pred HH-HHHHHHHHHHHHhC-cccccceeEEEEeCHHHHHHHHHH
Confidence 44 23445667777653 2211 237999999998776543
No 149
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=22.33 E-value=1e+02 Score=30.73 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~ 184 (399)
.+.+++++++++ ...+++.|.|.|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 467788888863 2457899999999998776543
No 150
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=22.27 E-value=1.2e+02 Score=31.24 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v 187 (399)
..+++.|+.+... +-++|+|.|+|.||+=+.......
T Consensus 104 ~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhc
Confidence 3466666666642 278999999999998877665555
No 151
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.27 E-value=92 Score=32.53 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 152 avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
-|++-|.++|+. ++ +++|+|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 356777777764 22 59999999998776664
No 152
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=22.15 E-value=1.8e+02 Score=26.36 Aligned_cols=21 Identities=24% Similarity=0.134 Sum_probs=16.4
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 015845 165 AQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d 185 (399)
.++++|.|.|.||.=++..+.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHH
Confidence 356999999999987766543
No 153
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=21.90 E-value=1e+02 Score=32.17 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=20.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
|++-|.++|+..- +++|+|||++=+.+.+.
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 4566666666432 59999999987666554
No 154
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=21.87 E-value=1e+02 Score=30.36 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 153 vl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
||+.|.++|++ -=+++|.|||++=+.+.+-
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 55666666775 4579999999987766654
No 155
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.77 E-value=1e+02 Score=30.01 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=20.0
Q ss_pred HHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhh
Q 015845 153 VMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHC 184 (399)
Q Consensus 153 vl~~l~~~~l~~a-~~vllsG~SAGG~g~~~~~ 184 (399)
|++-|++++..-- +--.++|.|||++-+...+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 4555665432211 1246899999999877664
No 156
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=21.62 E-value=1e+02 Score=32.04 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=13.2
Q ss_pred EEEeeChhhHHHHHhh
Q 015845 169 VLSGCSAGGLTSILHC 184 (399)
Q Consensus 169 llsG~SAGG~g~~~~~ 184 (399)
.++|.|||++-+.+.+
T Consensus 47 ~IaGtSAGALvAAl~a 62 (382)
T cd07219 47 RVAGTSAGSVIAALVV 62 (382)
T ss_pred eEEEEcHHHHHHHHHH
Confidence 5899999999877654
No 157
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.57 E-value=1.4e+02 Score=30.00 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=38.3
Q ss_pred cccEEEEecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHh--CCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 115 NWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAK--GMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 115 nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~--~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
+|..|.+.-.+ +|.|-... .| =|=..-+.+.+++|... |..+.++|+|.|+|-|.--++........
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~-----SL-~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTS-----SL-DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S-------H-HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcc-----hh-hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 68888887655 34442211 00 01144688899999974 44578999999999999988877666553
No 158
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=21.41 E-value=1.5e+02 Score=28.26 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
...+.++.++. .+++ .+.|+|+|=||.=|.+-+-.+.+
T Consensus 70 ~A~~yl~~~~~-~~~~--~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 70 SALAYLKKIAK-KYPG--KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHH-hCCC--CEEEEEechhhHHHHHHHHHccH
Confidence 33444444443 2333 59999999999766665555443
No 159
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=21.36 E-value=2.6e+02 Score=26.33 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHhC--CCccCeEEEEeeChhh
Q 015845 146 GARVFQAVMEDLMAKG--MKNAQNAVLSGCSAGG 177 (399)
Q Consensus 146 G~~n~~avl~~l~~~~--l~~a~~vllsG~SAGG 177 (399)
+...++..+++|.... -.+++.||++|-...+
T Consensus 15 ~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 15 LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred hHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 3456677777777311 1267999999987765
No 160
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=20.81 E-value=2.4e+02 Score=29.43 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=45.7
Q ss_pred ccccEEEEecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEee---------------ChhhH
Q 015845 114 YNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGC---------------SAGGL 178 (399)
Q Consensus 114 ~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~vllsG~---------------SAGG~ 178 (399)
.+|..++||=..|.+--|+.-. .-.=-=..|+..+...|.++.+ .-++|++||. |.|.+
T Consensus 143 ~~~G~~ii~P~~g~la~~~~g~-----gr~~~~~~I~~~~~~~~~~~~l-~gk~vlITgG~T~E~ID~VR~isN~SSG~~ 216 (399)
T PRK05579 143 RSRGVEIIGPASGRLACGDVGP-----GRMAEPEEIVAAAERALSPKDL-AGKRVLITAGPTREPIDPVRYITNRSSGKM 216 (399)
T ss_pred HHCCCEEECCCCccccCCCcCC-----CCCCCHHHHHHHHHHHhhhccc-CCCEEEEeCCCccccccceeeeccCCcchH
Confidence 3677788887666655554221 0000113456666555543334 3478999999 99988
Q ss_pred HHHHhhHHHHhhCCCCcEEEEee
Q 015845 179 TSILHCDNFRALFPVGTKVKCFA 201 (399)
Q Consensus 179 g~~~~~d~v~~~lp~~~~v~~l~ 201 (399)
|..+--...+ .+++|.++.
T Consensus 217 G~aiA~~l~~----~Ga~V~~v~ 235 (399)
T PRK05579 217 GYALARAAAR----RGADVTLVS 235 (399)
T ss_pred HHHHHHHHHH----CCCEEEEeC
Confidence 8765433333 367787764
No 161
>PRK13690 hypothetical protein; Provisional
Probab=20.73 E-value=1.3e+02 Score=28.12 Aligned_cols=28 Identities=18% Similarity=0.450 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeCh
Q 015845 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSA 175 (399)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~vllsG~SA 175 (399)
..+++++++|++..--++.++++.|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 4578889999986555677899999984
No 162
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=20.62 E-value=2.3e+02 Score=25.70 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 015845 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (399)
Q Consensus 149 n~~avl~~l~~~~l~~a~~vllsG~SAGG~g~~~~~d 185 (399)
.|.+.|+.-+. .+ .+.++|.|+|.|.+.++.+..
T Consensus 41 ~W~~~l~~~i~-~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 41 EWVQALDQAID-AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHCCH-C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 45555554332 22 345999999999999998876
No 163
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=20.58 E-value=1.7e+02 Score=29.00 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=14.6
Q ss_pred CeEEEEeeChhhHHHHHh
Q 015845 166 QNAVLSGCSAGGLTSILH 183 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~ 183 (399)
.+++|.|.|.||.-++..
T Consensus 162 ~~~~LvGhSmGG~val~~ 179 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKV 179 (349)
T ss_pred CCEEEEEeccchHHHHHH
Confidence 469999999999877643
No 164
>PLN02578 hydrolase
Probab=20.52 E-value=2.6e+02 Score=27.87 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=18.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHh
Q 015845 165 AQNAVLSGCSAGGLTSILHCDNFRA 189 (399)
Q Consensus 165 a~~vllsG~SAGG~g~~~~~d~v~~ 189 (399)
.++++|.|.|.||+=++..+....+
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~ 175 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPE 175 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChH
Confidence 3679999999999876665554333
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.20 E-value=2.8e+02 Score=28.57 Aligned_cols=44 Identities=20% Similarity=0.188 Sum_probs=25.8
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC
Q 015845 164 NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 212 (399)
Q Consensus 164 ~a~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~ 212 (399)
....+|+.|+|-|| .-+.++|..+|. .-.-.++-|+...-..++
T Consensus 111 ~~~pwI~~GgSY~G----~Laaw~r~kyP~-~~~ga~ASSapv~a~~df 154 (434)
T PF05577_consen 111 PNSPWIVFGGSYGG----ALAAWFRLKYPH-LFDGAWASSAPVQAKVDF 154 (434)
T ss_dssp CC--EEEEEETHHH----HHHHHHHHH-TT-T-SEEEEET--CCHCCTT
T ss_pred CCCCEEEECCcchh----HHHHHHHhhCCC-eeEEEEeccceeeeeccc
Confidence 33468888888777 455678999996 435666777776655544
No 166
>PRK03592 haloalkane dehalogenase; Provisional
Probab=20.16 E-value=3e+02 Score=26.12 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=22.5
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 015845 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (399)
Q Consensus 166 ~~vllsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 203 (399)
++++|.|.|.||.=++..+ .+.|..++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998776443 345654443444454
Done!