Query 015847
Match_columns 399
No_of_seqs 392 out of 1500
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 01:27:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.7E-32 3.6E-37 244.5 25.9 289 38-378 10-300 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 1E-31 2.3E-36 236.1 17.6 326 37-392 25-359 (448)
3 PRK14995 methyl viologen resis 100.0 4.4E-30 9.6E-35 245.6 28.8 306 40-373 5-344 (495)
4 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.7E-29 3.6E-34 236.2 27.2 307 39-367 6-323 (412)
5 PRK09556 uhpT sugar phosphate 100.0 1.6E-30 3.4E-35 247.3 20.4 297 43-365 31-335 (467)
6 PRK03545 putative arabinose tr 100.0 5E-29 1.1E-33 231.9 27.8 275 40-368 8-284 (390)
7 PRK10406 alpha-ketoglutarate t 100.0 1.3E-28 2.8E-33 231.9 27.5 285 41-364 22-319 (432)
8 TIGR00711 efflux_EmrB drug res 100.0 1.5E-28 3.2E-33 235.6 27.1 303 42-372 3-339 (485)
9 PRK10213 nepI ribonucleoside t 100.0 6.1E-28 1.3E-32 224.3 30.4 269 39-362 18-289 (394)
10 TIGR00710 efflux_Bcr_CflA drug 100.0 2.7E-28 5.8E-33 226.8 27.7 285 41-373 5-291 (385)
11 PRK11663 regulatory protein Uh 100.0 1.7E-28 3.8E-33 231.1 26.2 280 41-351 23-306 (434)
12 PRK10133 L-fucose transporter; 100.0 3.8E-28 8.2E-33 228.2 27.8 302 40-373 25-344 (438)
13 TIGR00891 2A0112 putative sial 100.0 3.5E-28 7.6E-33 227.5 26.9 302 37-365 8-315 (405)
14 PRK10091 MFS transport protein 100.0 4.6E-28 1E-32 224.7 26.9 280 41-373 3-284 (382)
15 PRK12307 putative sialic acid 100.0 3.2E-28 6.9E-33 229.4 26.1 294 39-371 16-313 (426)
16 TIGR00903 2A0129 major facilit 100.0 2.7E-28 5.8E-33 223.6 24.4 247 55-353 5-252 (368)
17 TIGR00893 2A0114 d-galactonate 100.0 2.7E-28 5.9E-33 227.2 24.4 277 51-355 4-282 (399)
18 PLN00028 nitrate transmembrane 100.0 4.3E-28 9.4E-33 230.5 25.9 282 40-354 35-318 (476)
19 TIGR00900 2A0121 H+ Antiporter 100.0 3.4E-28 7.4E-33 224.2 24.5 288 46-375 4-298 (365)
20 PF07690 MFS_1: Major Facilita 100.0 3.6E-28 7.8E-33 223.0 23.9 289 47-376 2-295 (352)
21 PRK11551 putative 3-hydroxyphe 100.0 1.1E-27 2.4E-32 224.3 27.1 292 38-374 12-305 (406)
22 PRK09705 cynX putative cyanate 100.0 1.7E-27 3.7E-32 221.5 28.0 262 58-372 26-288 (393)
23 PRK15034 nitrate/nitrite trans 100.0 1.6E-27 3.4E-32 220.2 27.2 285 38-369 31-331 (462)
24 TIGR00886 2A0108 nitrite extru 100.0 5.4E-28 1.2E-32 223.2 24.0 301 43-372 3-309 (366)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 7.9E-28 1.7E-32 222.7 25.1 272 56-375 18-291 (377)
26 PRK15402 multidrug efflux syst 100.0 1.9E-27 4.1E-32 222.5 26.8 283 45-374 17-301 (406)
27 TIGR01299 synapt_SV2 synaptic 100.0 5.3E-28 1.2E-32 236.0 23.8 189 43-244 169-362 (742)
28 PRK10642 proline/glycine betai 100.0 1.7E-27 3.6E-32 227.8 26.2 300 41-365 16-327 (490)
29 PRK03699 putative transporter; 100.0 4.7E-27 1E-31 218.9 28.0 283 40-372 6-289 (394)
30 PRK10504 putative transporter; 100.0 4.7E-27 1E-31 224.2 28.4 306 40-374 9-347 (471)
31 PRK15403 multidrug efflux syst 100.0 5.5E-27 1.2E-31 219.1 28.3 263 46-354 21-285 (413)
32 PRK10473 multidrug efflux syst 100.0 8.6E-27 1.9E-31 217.2 29.3 283 45-376 7-291 (392)
33 TIGR00881 2A0104 phosphoglycer 100.0 1.4E-27 3E-32 221.3 21.8 275 49-352 3-280 (379)
34 COG2223 NarK Nitrate/nitrite t 100.0 8.1E-28 1.8E-32 212.1 18.8 289 37-375 10-305 (417)
35 PRK11195 lysophospholipid tran 100.0 9.2E-27 2E-31 216.3 25.0 274 42-361 4-278 (393)
36 PRK15075 citrate-proton sympor 100.0 2.4E-26 5.1E-31 216.7 27.1 284 40-364 14-314 (434)
37 TIGR00894 2A0114euk Na(+)-depe 100.0 1.4E-26 3E-31 220.5 25.3 284 39-354 17-327 (465)
38 KOG2615 Permease of the major 100.0 6.5E-28 1.4E-32 208.4 14.6 302 58-374 42-349 (451)
39 PRK03633 putative MFS family t 100.0 5.7E-26 1.2E-30 210.6 28.4 276 41-371 6-282 (381)
40 PRK11102 bicyclomycin/multidru 100.0 2.2E-26 4.8E-31 213.3 25.2 266 55-366 5-272 (377)
41 PRK09952 shikimate transporter 100.0 4.1E-26 8.9E-31 215.1 27.2 296 40-368 21-330 (438)
42 PRK10077 xylE D-xylose transpo 100.0 4.1E-26 8.8E-31 218.3 27.3 312 40-374 11-356 (479)
43 PRK03893 putative sialic acid 100.0 6.6E-26 1.4E-30 217.8 27.8 305 38-370 17-357 (496)
44 PRK11043 putative transporter; 100.0 1.3E-25 2.8E-30 209.8 28.5 273 44-368 9-282 (401)
45 TIGR00885 fucP L-fucose:H+ sym 99.9 1.6E-25 3.4E-30 208.7 27.9 304 42-376 4-321 (410)
46 TIGR00895 2A0115 benzoate tran 99.9 4.7E-26 1E-30 212.5 24.5 293 40-361 16-322 (398)
47 TIGR00879 SP MFS transporter, 99.9 4.5E-26 9.7E-31 217.8 24.4 298 46-372 33-367 (481)
48 TIGR00805 oat sodium-independe 99.9 5E-27 1.1E-31 228.5 17.2 311 45-370 37-415 (633)
49 PRK05122 major facilitator sup 99.9 2E-25 4.3E-30 208.5 26.9 277 40-375 14-300 (399)
50 TIGR00897 2A0118 polyol permea 99.9 4E-25 8.6E-30 206.4 28.9 273 41-358 13-291 (402)
51 TIGR00899 2A0120 sugar efflux 99.9 3.1E-25 6.6E-30 205.5 27.8 274 48-372 4-283 (375)
52 KOG1330 Sugar transporter/spin 99.9 3.8E-27 8.1E-32 209.4 14.0 280 36-351 28-310 (493)
53 TIGR00892 2A0113 monocarboxyla 99.9 4.3E-25 9.4E-30 208.9 29.0 282 39-350 17-302 (455)
54 PRK11273 glpT sn-glycerol-3-ph 99.9 1.1E-25 2.5E-30 213.1 24.8 274 48-352 36-317 (452)
55 PRK11652 emrD multidrug resist 99.9 3.8E-25 8.2E-30 206.2 27.3 265 39-353 6-272 (394)
56 TIGR00887 2A0109 phosphate:H+ 99.9 1.2E-25 2.7E-30 215.6 23.6 319 41-373 16-384 (502)
57 PRK12382 putative transporter; 99.9 5.6E-25 1.2E-29 205.0 27.2 276 41-375 15-300 (392)
58 PRK09874 drug efflux system pr 99.9 7.7E-25 1.7E-29 205.2 28.0 293 41-374 14-308 (408)
59 TIGR00896 CynX cyanate transpo 99.9 8.2E-25 1.8E-29 201.1 26.5 267 56-374 15-283 (355)
60 PRK11646 multidrug resistance 99.9 1.3E-24 2.9E-29 202.4 28.0 281 44-376 13-296 (400)
61 PRK10054 putative transporter; 99.9 5.3E-25 1.1E-29 204.7 24.7 284 41-373 7-293 (395)
62 TIGR00898 2A0119 cation transp 99.9 1.1E-25 2.5E-30 216.6 20.9 279 62-375 110-406 (505)
63 PRK10489 enterobactin exporter 99.9 3.2E-25 6.9E-30 208.2 23.4 284 45-375 21-310 (417)
64 KOG2532 Permease of the major 99.9 1.4E-25 3E-30 208.7 20.4 277 69-376 66-355 (466)
65 TIGR00712 glpT glycerol-3-phos 99.9 6.4E-25 1.4E-29 207.2 24.8 284 41-354 27-317 (438)
66 TIGR00902 2A0127 phenyl propri 99.9 4.1E-24 8.8E-29 198.2 27.4 282 44-377 7-293 (382)
67 KOG2533 Permease of the major 99.9 2.8E-25 6E-30 207.1 17.4 292 48-362 52-351 (495)
68 PRK11128 putative 3-phenylprop 99.9 6.5E-24 1.4E-28 196.9 26.2 275 50-376 13-292 (382)
69 KOG3764 Vesicular amine transp 99.9 8E-26 1.7E-30 196.7 11.5 262 84-389 108-373 (464)
70 cd06174 MFS The Major Facilita 99.9 1.4E-23 3.1E-28 192.3 26.3 260 45-376 3-264 (352)
71 TIGR00883 2A0106 metabolite-pr 99.9 7.3E-24 1.6E-28 197.4 24.2 274 52-364 4-295 (394)
72 KOG0569 Permease of the major 99.9 1.4E-23 3.1E-28 193.1 25.3 291 68-375 46-356 (485)
73 TIGR00901 2A0125 AmpG-related 99.9 3.9E-23 8.4E-28 190.0 25.3 278 56-374 3-295 (356)
74 PRK11902 ampG muropeptide tran 99.9 1E-22 2.2E-27 190.3 27.4 276 47-369 5-291 (402)
75 PRK11010 ampG muropeptide tran 99.9 1.7E-22 3.6E-27 192.7 28.7 282 40-368 11-303 (491)
76 PRK15011 sugar efflux transpor 99.9 4.6E-22 9.9E-27 185.2 30.0 273 44-370 18-298 (393)
77 COG0738 FucP Fucose permease [ 99.9 4.1E-22 8.9E-27 175.0 25.8 303 40-376 12-324 (422)
78 PRK08633 2-acyl-glycerophospho 99.9 1.1E-22 2.4E-27 214.4 25.3 304 41-375 9-320 (1146)
79 PF05977 MFS_3: Transmembrane 99.9 2.7E-22 5.7E-27 190.0 24.7 296 38-378 7-308 (524)
80 TIGR00882 2A0105 oligosacchari 99.9 5.3E-22 1.2E-26 185.1 24.3 290 42-373 3-303 (396)
81 KOG0254 Predicted transporter 99.9 6.8E-22 1.5E-26 189.9 24.6 297 57-376 63-381 (513)
82 KOG2504 Monocarboxylate transp 99.9 1.5E-21 3.2E-26 184.1 25.2 321 38-388 43-399 (509)
83 PF06609 TRI12: Fungal trichot 99.9 2.2E-21 4.7E-26 183.2 26.0 293 51-372 54-398 (599)
84 PRK06814 acylglycerophosphoeth 99.9 6.9E-22 1.5E-26 207.8 25.1 249 84-369 54-306 (1140)
85 PRK09528 lacY galactoside perm 99.9 1.4E-21 2.9E-26 183.8 22.0 294 42-376 11-314 (420)
86 PRK10207 dipeptide/tripeptide 99.9 1.9E-20 4.2E-25 177.7 26.9 158 40-210 13-176 (489)
87 TIGR00889 2A0110 nucleoside tr 99.9 1.6E-20 3.4E-25 175.8 23.5 281 46-373 7-300 (418)
88 TIGR00806 rfc RFC reduced fola 99.9 3.2E-20 7E-25 168.7 24.2 166 57-241 42-207 (511)
89 TIGR00924 yjdL_sub1_fam amino 99.9 5.5E-20 1.2E-24 174.6 26.1 149 41-195 10-166 (475)
90 TIGR00792 gph sugar (Glycoside 99.9 1.6E-20 3.5E-25 177.6 22.5 278 57-374 15-307 (437)
91 TIGR02718 sider_RhtX_FptX side 99.9 2E-19 4.2E-24 167.5 28.9 274 43-365 3-285 (390)
92 COG2807 CynX Cyanate permease 99.9 1E-18 2.2E-23 151.5 26.6 268 56-376 27-296 (395)
93 KOG0255 Synaptic vesicle trans 99.8 1.1E-19 2.3E-24 175.6 22.0 277 68-379 110-405 (521)
94 KOG0253 Synaptic vesicle trans 99.8 1E-18 2.2E-23 151.0 21.1 186 40-248 77-262 (528)
95 PF00083 Sugar_tr: Sugar (and 99.8 2.9E-23 6.2E-28 197.1 -10.6 306 49-372 8-334 (451)
96 TIGR01301 GPH_sucrose GPH fami 99.8 1.8E-17 4E-22 154.6 26.5 315 39-376 2-358 (477)
97 KOG0252 Inorganic phosphate tr 99.8 2.5E-20 5.4E-25 165.6 5.4 323 44-375 44-399 (538)
98 PRK09669 putative symporter Ya 99.8 2.1E-17 4.5E-22 156.5 25.2 269 57-368 25-308 (444)
99 PRK09584 tppB putative tripept 99.8 4.7E-17 1E-21 155.5 26.4 157 41-210 21-183 (500)
100 PF13347 MFS_2: MFS/sugar tran 99.8 1.8E-17 3.9E-22 156.1 21.5 287 64-391 25-327 (428)
101 PRK10429 melibiose:sodium symp 99.8 4.4E-17 9.6E-22 155.2 23.2 286 48-371 13-313 (473)
102 KOG2325 Predicted transporter/ 99.8 1.2E-16 2.5E-21 146.5 23.3 200 36-246 29-239 (488)
103 PF03825 Nuc_H_symport: Nucleo 99.8 1.8E-16 3.9E-21 146.1 24.3 283 46-374 7-293 (400)
104 PTZ00207 hypothetical protein; 99.8 8.6E-17 1.9E-21 153.2 22.7 129 58-194 44-180 (591)
105 PRK15462 dipeptide/tripeptide 99.8 9.4E-16 2E-20 143.8 26.2 149 41-195 9-163 (493)
106 PRK09848 glucuronide transport 99.7 1.3E-15 2.9E-20 144.4 25.9 286 40-373 7-313 (448)
107 PF01306 LacY_symp: LacY proto 99.7 4.6E-16 1E-20 141.0 19.1 295 41-377 7-312 (412)
108 COG2211 MelB Na+/melibiose sym 99.7 2.4E-15 5.3E-20 137.6 23.7 318 38-393 9-341 (467)
109 PRK11462 putative transporter; 99.7 4.5E-15 9.8E-20 140.6 26.2 274 49-366 17-305 (460)
110 PF03137 OATP: Organic Anion T 99.7 8.3E-19 1.8E-23 166.9 -0.3 313 45-369 7-389 (539)
111 TIGR00788 fbt folate/biopterin 99.7 3.5E-16 7.5E-21 148.3 16.9 298 39-370 24-334 (468)
112 KOG3626 Organic anion transpor 99.7 2.2E-16 4.9E-21 150.4 15.1 314 45-370 101-477 (735)
113 TIGR01272 gluP glucose/galacto 99.7 4E-15 8.7E-20 133.3 21.2 217 131-372 6-226 (310)
114 KOG2563 Permease of the major 99.7 2.8E-14 6E-19 127.5 21.4 286 45-367 49-345 (480)
115 KOG2816 Predicted transporter 99.7 2.6E-14 5.6E-19 133.0 21.9 307 45-383 26-337 (463)
116 KOG4686 Predicted sugar transp 99.6 4.8E-16 1.1E-20 129.9 8.6 291 42-371 45-348 (459)
117 PRK10642 proline/glycine betai 99.6 1.1E-14 2.4E-19 139.5 17.2 174 51-245 260-438 (490)
118 PF03209 PUCC: PUCC protein; 99.6 2E-13 4.4E-18 121.8 22.0 289 67-396 6-318 (403)
119 TIGR00889 2A0110 nucleoside tr 99.6 6.9E-15 1.5E-19 137.8 13.4 174 59-242 226-408 (418)
120 PF05631 DUF791: Protein of un 99.6 3.8E-13 8.3E-18 118.1 23.1 276 49-370 42-325 (354)
121 TIGR01299 synapt_SV2 synaptic 99.6 1.3E-14 2.8E-19 142.6 15.1 140 85-241 598-738 (742)
122 PRK15011 sugar efflux transpor 99.6 4.5E-14 9.8E-19 131.6 15.8 157 59-238 234-392 (393)
123 TIGR00880 2_A_01_02 Multidrug 99.6 1.7E-14 3.6E-19 113.6 10.0 135 88-238 4-140 (141)
124 PRK11551 putative 3-hydroxyphe 99.6 4.8E-14 1E-18 132.1 14.6 134 56-195 235-369 (406)
125 PRK05122 major facilitator sup 99.6 7.9E-14 1.7E-18 130.3 15.7 160 58-241 233-393 (399)
126 PF11700 ATG22: Vacuole efflux 99.6 4.4E-12 9.6E-17 119.4 27.0 257 82-364 70-359 (477)
127 TIGR00890 2A0111 Oxalate/Forma 99.6 3.2E-14 7E-19 131.6 12.2 140 50-195 214-356 (377)
128 TIGR00902 2A0127 phenyl propri 99.5 1.3E-13 2.9E-18 127.9 14.8 148 41-195 205-354 (382)
129 COG3104 PTR2 Dipeptide/tripept 99.5 1.8E-12 4E-17 118.0 21.5 176 41-238 21-207 (498)
130 PRK09528 lacY galactoside perm 99.5 2.4E-14 5.2E-19 134.7 9.1 139 84-238 264-405 (420)
131 cd06174 MFS The Major Facilita 99.5 2.9E-13 6.2E-18 123.9 15.2 163 50-234 184-349 (352)
132 PRK10489 enterobactin exporter 99.5 2.2E-13 4.8E-18 128.1 14.7 162 59-242 241-405 (417)
133 TIGR00899 2A0120 sugar efflux 99.5 3.4E-13 7.3E-18 124.9 15.2 155 61-238 219-375 (375)
134 PRK09705 cynX putative cyanate 99.5 8.4E-13 1.8E-17 123.0 17.8 179 42-243 206-388 (393)
135 TIGR00892 2A0113 monocarboxyla 99.5 1.2E-13 2.6E-18 131.0 11.0 147 43-195 243-394 (455)
136 PRK12382 putative transporter; 99.5 6.2E-13 1.3E-17 124.0 15.6 155 56-234 231-386 (392)
137 PRK03633 putative MFS family t 99.5 6.6E-13 1.4E-17 123.3 15.4 153 58-235 217-370 (381)
138 PRK09874 drug efflux system pr 99.5 4.5E-13 9.8E-18 125.6 13.3 159 57-233 235-394 (408)
139 TIGR00897 2A0118 polyol permea 99.5 6.6E-13 1.4E-17 124.2 14.1 171 43-236 224-400 (402)
140 TIGR00893 2A0114 d-galactonate 99.5 1.4E-12 3E-17 121.4 14.9 148 41-195 215-372 (399)
141 PRK03545 putative arabinose tr 99.5 1.9E-12 4.1E-17 120.6 15.7 149 62-234 226-377 (390)
142 PRK03699 putative transporter; 99.5 1.1E-12 2.3E-17 122.4 13.9 146 43-195 207-354 (394)
143 PRK03893 putative sialic acid 99.5 1.8E-12 3.9E-17 124.7 15.8 131 59-195 293-427 (496)
144 PRK09556 uhpT sugar phosphate 99.4 1.6E-12 3.4E-17 124.0 13.9 148 42-195 259-411 (467)
145 PRK09952 shikimate transporter 99.4 2.4E-12 5.2E-17 121.6 14.6 167 53-239 262-435 (438)
146 COG2270 Permeases of the major 99.4 8.5E-11 1.8E-15 105.0 22.5 275 81-376 57-340 (438)
147 PRK11128 putative 3-phenylprop 99.4 5.3E-12 1.1E-16 117.3 14.8 146 43-195 207-354 (382)
148 TIGR00879 SP MFS transporter, 99.4 7.6E-12 1.7E-16 119.6 16.0 174 45-240 288-474 (481)
149 TIGR00883 2A0106 metabolite-pr 99.4 1E-12 2.2E-17 122.4 9.2 147 43-195 221-374 (394)
150 TIGR00895 2A0115 benzoate tran 99.4 3.5E-12 7.5E-17 119.0 11.6 141 47-193 256-397 (398)
151 PRK11273 glpT sn-glycerol-3-ph 99.4 5.4E-12 1.2E-16 119.8 12.6 171 43-235 255-433 (452)
152 PRK11663 regulatory protein Uh 99.4 1.7E-11 3.6E-16 115.9 15.3 168 43-233 245-420 (434)
153 TIGR00891 2A0112 putative sial 99.4 5E-12 1.1E-16 118.3 11.1 130 60-195 257-389 (405)
154 TIGR00900 2A0121 H+ Antiporter 99.3 3.1E-12 6.7E-17 117.8 9.4 128 62-195 232-362 (365)
155 PRK12307 putative sialic acid 99.3 1.1E-11 2.5E-16 116.8 13.4 130 60-195 250-382 (426)
156 COG2814 AraJ Arabinose efflux 99.3 4.7E-11 1E-15 107.5 15.9 172 40-235 210-384 (394)
157 TIGR00887 2A0109 phosphate:H+ 99.3 3E-11 6.5E-16 116.3 14.4 179 58-242 305-494 (502)
158 PRK10504 putative transporter; 99.3 3E-11 6.5E-16 115.5 14.2 147 43-195 263-414 (471)
159 KOG0569 Permease of the major 99.3 5E-11 1.1E-15 110.6 14.9 177 46-244 275-462 (485)
160 PF05977 MFS_3: Transmembrane 99.3 8.3E-11 1.8E-15 112.1 16.5 136 54-195 231-368 (524)
161 PF11700 ATG22: Vacuole efflux 99.3 5.9E-11 1.3E-15 111.9 15.3 177 43-240 283-471 (477)
162 PRK11010 ampG muropeptide tran 99.3 4.8E-10 1E-14 107.3 20.7 153 65-239 247-405 (491)
163 TIGR00882 2A0105 oligosacchari 99.3 2.5E-11 5.4E-16 113.3 11.6 132 84-231 256-389 (396)
164 COG2271 UhpC Sugar phosphate p 99.3 2.5E-11 5.5E-16 108.1 10.7 158 40-210 251-416 (448)
165 TIGR02718 sider_RhtX_FptX side 99.3 3.4E-11 7.4E-16 112.2 11.6 139 51-195 218-365 (390)
166 PRK10077 xylE D-xylose transpo 99.3 1.1E-10 2.3E-15 112.0 15.2 133 56-194 286-424 (479)
167 PLN00028 nitrate transmembrane 99.3 2.3E-11 5E-16 116.1 10.5 154 60-237 271-433 (476)
168 TIGR00898 2A0119 cation transp 99.3 3.3E-11 7.1E-16 116.3 11.1 137 88-242 361-500 (505)
169 PRK15075 citrate-proton sympor 99.3 9.7E-11 2.1E-15 110.7 14.1 137 53-195 250-393 (434)
170 TIGR00881 2A0104 phosphoglycer 99.3 2.5E-11 5.4E-16 112.3 9.8 153 44-209 219-378 (379)
171 TIGR00896 CynX cyanate transpo 99.2 1.3E-10 2.9E-15 106.8 14.1 141 49-196 205-348 (355)
172 TIGR00792 gph sugar (Glycoside 99.2 1.9E-11 4.1E-16 115.7 8.0 112 84-195 259-379 (437)
173 PF01770 Folate_carrier: Reduc 99.2 2.7E-08 5.9E-13 90.3 27.2 275 65-362 28-323 (412)
174 PRK10406 alpha-ketoglutarate t 99.2 2.6E-10 5.6E-15 107.8 15.1 135 54-194 256-397 (432)
175 KOG0637 Sucrose transporter an 99.2 1E-09 2.3E-14 98.7 17.7 147 41-193 32-202 (498)
176 PRK15402 multidrug efflux syst 99.2 1.5E-10 3.2E-15 108.5 13.2 128 61-195 235-369 (406)
177 PF03825 Nuc_H_symport: Nucleo 99.2 1.9E-10 4.1E-15 106.4 13.3 182 42-239 208-398 (400)
178 TIGR00712 glpT glycerol-3-phos 99.2 1.5E-10 3.3E-15 109.5 12.9 174 45-240 255-437 (438)
179 PRK10054 putative transporter; 99.2 1E-10 2.2E-15 109.0 11.4 111 84-195 246-358 (395)
180 PRK10213 nepI ribonucleoside t 99.2 4.6E-10 1E-14 104.6 15.4 125 64-195 240-365 (394)
181 KOG4686 Predicted sugar transp 99.2 5.6E-10 1.2E-14 94.1 13.1 125 66-198 290-416 (459)
182 KOG0253 Synaptic vesicle trans 99.2 4.4E-11 9.5E-16 104.3 6.8 129 91-237 390-519 (528)
183 KOG2504 Monocarboxylate transp 99.2 2.2E-10 4.7E-15 108.8 11.8 175 42-237 299-476 (509)
184 PF06813 Nodulin-like: Nodulin 99.2 1.1E-09 2.4E-14 93.3 14.9 132 56-195 17-156 (250)
185 PRK10091 MFS transport protein 99.2 6.8E-10 1.5E-14 103.1 14.8 123 65-195 224-349 (382)
186 TIGR01272 gluP glucose/galacto 99.2 6E-10 1.3E-14 100.0 13.6 146 41-195 140-289 (310)
187 TIGR00894 2A0114euk Na(+)-depe 99.1 6.4E-10 1.4E-14 106.2 13.4 177 41-237 261-450 (465)
188 PRK11646 multidrug resistance 99.1 3.2E-10 6.9E-15 105.9 11.1 130 61-196 228-359 (400)
189 COG2270 Permeases of the major 99.1 6.1E-10 1.3E-14 99.6 11.7 161 58-239 269-431 (438)
190 TIGR02332 HpaX 4-hydroxyphenyl 99.1 7.1E-10 1.5E-14 104.0 12.9 146 44-195 245-394 (412)
191 COG2223 NarK Nitrate/nitrite t 99.1 6.8E-10 1.5E-14 99.2 11.7 150 40-196 217-375 (417)
192 PRK11902 ampG muropeptide tran 99.1 5.1E-10 1.1E-14 104.7 11.6 149 65-239 234-392 (402)
193 PF03092 BT1: BT1 family; Int 99.1 4.5E-09 9.8E-14 98.6 17.9 274 61-366 10-297 (433)
194 TIGR00711 efflux_EmrB drug res 99.1 8.1E-10 1.8E-14 106.1 11.5 143 47-195 261-409 (485)
195 PF01306 LacY_symp: LacY proto 99.1 1.8E-09 3.9E-14 98.4 11.8 142 84-241 261-405 (412)
196 TIGR00901 2A0125 AmpG-related 99.0 1.1E-09 2.4E-14 100.7 10.5 132 43-180 211-355 (356)
197 PF13347 MFS_2: MFS/sugar tran 99.0 4.3E-09 9.3E-14 99.3 14.4 149 41-195 225-383 (428)
198 PRK10473 multidrug efflux syst 99.0 2.4E-09 5.3E-14 99.8 12.6 123 63-195 225-348 (392)
199 PF07690 MFS_1: Major Facilita 99.0 5.2E-10 1.1E-14 102.5 7.9 134 48-187 213-352 (352)
200 PRK08633 2-acyl-glycerophospho 99.0 3E-09 6.5E-14 113.0 14.5 131 59-195 250-383 (1146)
201 PRK14995 methyl viologen resis 99.0 2E-09 4.2E-14 103.5 11.5 140 50-195 268-412 (495)
202 TIGR00710 efflux_Bcr_CflA drug 99.0 3.4E-09 7.3E-14 98.5 12.1 127 60-194 225-359 (385)
203 TIGR00926 2A1704 Peptide:H+ sy 99.0 2E-07 4.3E-12 91.3 24.0 158 61-233 8-178 (654)
204 TIGR00903 2A0129 major facilit 99.0 1.2E-08 2.6E-13 94.0 14.7 144 41-194 192-340 (368)
205 PRK06814 acylglycerophosphoeth 99.0 5E-09 1.1E-13 111.0 13.3 147 43-195 227-395 (1140)
206 PRK15034 nitrate/nitrite trans 99.0 9.2E-09 2E-13 96.0 13.2 149 41-196 252-428 (462)
207 PRK11043 putative transporter; 99.0 9.6E-09 2.1E-13 96.1 13.4 129 60-195 222-356 (401)
208 PRK11195 lysophospholipid tran 99.0 1.9E-08 4E-13 93.8 15.0 122 66-194 231-354 (393)
209 PRK09848 glucuronide transport 98.9 1.6E-09 3.4E-14 102.9 7.5 147 43-195 230-387 (448)
210 PF06963 FPN1: Ferroportin1 (F 98.9 6.2E-07 1.3E-11 83.0 23.8 297 42-368 3-337 (432)
211 PRK10429 melibiose:sodium symp 98.9 2.5E-09 5.4E-14 102.2 8.4 149 41-195 231-392 (473)
212 PRK10133 L-fucose transporter; 98.9 9.4E-09 2E-13 97.0 11.8 125 62-195 279-406 (438)
213 PRK11102 bicyclomycin/multidru 98.9 1.6E-08 3.4E-13 93.8 12.5 126 59-191 212-344 (377)
214 PRK09669 putative symporter Ya 98.9 3.9E-09 8.5E-14 100.1 8.0 112 84-195 266-387 (444)
215 TIGR00788 fbt folate/biopterin 98.9 1E-08 2.3E-13 97.5 9.5 156 69-238 281-447 (468)
216 KOG2532 Permease of the major 98.9 2.3E-08 5E-13 93.9 11.4 174 43-236 260-446 (466)
217 KOG0252 Inorganic phosphate tr 98.8 7.1E-09 1.5E-13 93.5 6.6 195 41-246 304-507 (538)
218 COG0477 ProP Permeases of the 98.8 2.5E-07 5.4E-12 82.6 16.3 141 49-195 10-157 (338)
219 KOG3762 Predicted transporter 98.8 2.1E-08 4.5E-13 92.2 7.7 141 49-195 379-521 (618)
220 TIGR00769 AAA ADP/ATP carrier 98.8 3.1E-06 6.7E-11 79.3 22.3 293 40-364 6-343 (472)
221 COG2807 CynX Cyanate permease 98.7 4.4E-07 9.5E-12 79.9 14.7 151 41-198 208-361 (395)
222 TIGR00886 2A0108 nitrite extru 98.7 2.5E-08 5.4E-13 92.0 7.6 118 58-182 242-365 (366)
223 PRK11652 emrD multidrug resist 98.7 1.3E-07 2.9E-12 88.2 12.5 126 63-195 229-359 (394)
224 TIGR00885 fucP L-fucose:H+ sym 98.7 1.3E-07 2.9E-12 88.4 12.0 143 46-195 237-380 (410)
225 PF00083 Sugar_tr: Sugar (and 98.7 1.2E-10 2.7E-15 110.6 -8.7 165 56-244 268-444 (451)
226 PRK11462 putative transporter; 98.6 2.7E-07 5.9E-12 87.7 11.5 141 49-195 236-386 (460)
227 TIGR00924 yjdL_sub1_fam amino 98.6 9.3E-07 2E-11 84.4 14.4 112 84-195 314-442 (475)
228 KOG3098 Uncharacterized conser 98.6 5.1E-06 1.1E-10 77.0 18.6 107 88-195 56-163 (461)
229 COG2211 MelB Na+/melibiose sym 98.6 2.3E-07 5E-12 85.7 9.1 149 41-195 236-395 (467)
230 KOG3764 Vesicular amine transp 98.5 1.8E-07 3.8E-12 83.2 6.4 160 51-232 280-449 (464)
231 PF05978 UNC-93: Ion channel r 98.5 2E-06 4.3E-11 67.9 11.3 109 86-195 41-150 (156)
232 PF03209 PUCC: PUCC protein; 98.5 1.2E-06 2.6E-11 79.0 11.0 136 54-195 221-362 (403)
233 COG0738 FucP Fucose permease [ 98.5 7.3E-07 1.6E-11 79.7 9.0 147 40-195 235-383 (422)
234 PRK15403 multidrug efflux syst 98.5 1.8E-06 3.9E-11 81.1 12.1 147 42-195 219-372 (413)
235 PF06779 DUF1228: Protein of u 98.5 2.6E-07 5.6E-12 63.9 4.7 80 53-138 4-83 (85)
236 PF02487 CLN3: CLN3 protein; 98.4 0.00011 2.4E-09 67.1 21.6 136 84-239 61-198 (402)
237 PRK09584 tppB putative tripept 98.4 2.8E-06 6.2E-11 81.6 11.8 109 84-192 318-440 (500)
238 KOG0254 Predicted transporter 98.4 6.6E-06 1.4E-10 79.6 14.2 181 42-244 296-491 (513)
239 PF12832 MFS_1_like: MFS_1 lik 98.4 6.1E-07 1.3E-11 61.7 4.4 70 46-121 5-74 (77)
240 KOG4332 Predicted sugar transp 98.3 4.4E-06 9.5E-11 70.4 9.5 108 49-163 45-154 (454)
241 PRK10207 dipeptide/tripeptide 98.3 5.8E-06 1.3E-10 79.1 11.5 111 84-194 311-439 (489)
242 PTZ00207 hypothetical protein; 98.3 4.4E-06 9.5E-11 80.6 10.4 186 40-235 352-550 (591)
243 TIGR01301 GPH_sucrose GPH fami 98.2 4.8E-05 1E-09 71.9 14.9 185 42-240 259-475 (477)
244 KOG2533 Permease of the major 98.2 2.7E-06 5.8E-11 80.5 6.1 142 42-189 274-423 (495)
245 KOG3574 Acetyl-CoA transporter 98.2 3.1E-05 6.7E-10 68.7 12.0 141 39-188 29-187 (510)
246 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0009 1.9E-08 63.4 20.3 247 94-360 71-355 (491)
247 KOG2615 Permease of the major 98.0 6.8E-05 1.5E-09 66.7 11.3 121 69-195 290-413 (451)
248 KOG2816 Predicted transporter 98.0 4.5E-05 9.8E-10 71.7 10.2 124 66-195 267-391 (463)
249 PF06609 TRI12: Fungal trichot 97.9 0.00014 3E-09 70.2 11.6 193 42-241 311-558 (599)
250 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00019 4.1E-09 49.3 9.3 71 286-363 4-74 (77)
251 KOG0255 Synaptic vesicle trans 97.9 0.00039 8.5E-09 67.5 14.8 142 86-244 354-500 (521)
252 KOG3810 Micronutrient transpor 97.9 0.00012 2.5E-09 64.3 9.4 128 99-240 59-186 (433)
253 COG3202 ATP/ADP translocase [E 97.7 0.01 2.2E-07 55.1 20.2 299 40-366 26-364 (509)
254 PRK15462 dipeptide/tripeptide 97.6 0.00096 2.1E-08 63.5 13.0 85 282-372 9-94 (493)
255 PF00854 PTR2: POT family; In 97.5 0.00081 1.8E-08 62.2 9.8 108 113-236 2-122 (372)
256 PF13000 Acatn: Acetyl-coenzym 97.4 0.012 2.6E-07 54.8 16.4 72 44-118 3-76 (544)
257 COG3104 PTR2 Dipeptide/tripept 97.4 0.0024 5.1E-08 59.4 11.5 97 277-375 15-113 (498)
258 PF02487 CLN3: CLN3 protein; 97.3 0.0071 1.5E-07 55.5 13.1 109 84-194 283-395 (402)
259 PF03092 BT1: BT1 family; Int 97.3 0.00061 1.3E-08 64.2 6.5 154 73-241 252-417 (433)
260 KOG1330 Sugar transporter/spin 97.3 0.0016 3.5E-08 59.8 8.8 126 66-197 273-413 (493)
261 KOG2563 Permease of the major 97.0 0.00075 1.6E-08 61.7 4.5 132 58-195 283-420 (480)
262 TIGR00806 rfc RFC reduced fola 97.0 0.02 4.3E-07 53.8 13.1 63 318-381 56-119 (511)
263 KOG1237 H+/oligopeptide sympor 96.9 0.023 4.9E-07 55.3 13.5 159 39-210 35-227 (571)
264 PF06963 FPN1: Ferroportin1 (F 96.8 0.0078 1.7E-07 56.2 9.3 130 60-195 277-417 (432)
265 KOG3762 Predicted transporter 96.7 0.00083 1.8E-08 62.7 1.9 85 42-132 12-97 (618)
266 PF06779 DUF1228: Protein of u 96.6 0.026 5.7E-07 39.2 8.6 74 297-377 7-80 (85)
267 KOG2325 Predicted transporter/ 96.6 0.0039 8.4E-08 58.5 5.6 155 39-195 260-449 (488)
268 KOG3097 Predicted membrane pro 96.5 0.5 1.1E-05 41.9 17.5 66 97-163 73-139 (390)
269 PRK03612 spermidine synthase; 96.3 0.15 3.2E-06 49.4 14.5 121 67-195 41-170 (521)
270 KOG3098 Uncharacterized conser 96.0 0.1 2.3E-06 48.9 11.5 143 43-191 242-409 (461)
271 PF05631 DUF791: Protein of un 96.0 0.24 5.1E-06 44.6 13.0 52 318-370 64-115 (354)
272 TIGR00939 2a57 Equilibrative N 96.0 0.1 2.3E-06 49.2 11.5 109 84-193 309-431 (437)
273 PF03137 OATP: Organic Anion T 95.6 0.0032 7E-08 60.9 0.0 148 43-196 307-514 (539)
274 KOG1479 Nucleoside transporter 95.5 2.1 4.5E-05 39.6 17.6 122 42-168 19-150 (406)
275 PF07672 MFS_Mycoplasma: Mycop 95.5 0.043 9.4E-07 46.8 6.2 106 166-296 2-108 (267)
276 TIGR00939 2a57 Equilibrative N 95.4 1.7 3.7E-05 41.1 17.4 51 134-189 105-156 (437)
277 TIGR00805 oat sodium-independe 94.7 0.074 1.6E-06 52.9 6.6 79 43-127 332-414 (633)
278 KOG4830 Predicted sugar transp 94.3 0.025 5.4E-07 48.0 1.7 63 273-340 192-254 (412)
279 KOG3880 Predicted small molecu 94.2 0.64 1.4E-05 40.9 10.1 173 45-235 16-197 (409)
280 PF01733 Nucleoside_tran: Nucl 93.9 0.019 4.2E-07 51.5 0.5 106 86-192 186-306 (309)
281 PF01770 Folate_carrier: Reduc 93.2 1.4 3.1E-05 40.8 11.3 98 80-177 283-383 (412)
282 TIGR00880 2_A_01_02 Multidrug 92.6 0.17 3.8E-06 38.6 4.1 44 331-375 6-49 (141)
283 KOG1479 Nucleoside transporter 91.3 4.8 0.0001 37.2 12.1 106 84-191 284-400 (406)
284 PF06813 Nodulin-like: Nodulin 90.2 2.4 5.3E-05 36.6 8.8 56 317-374 31-86 (250)
285 PF13000 Acatn: Acetyl-coenzym 86.4 3.6 7.7E-05 39.1 7.8 55 141-195 411-466 (544)
286 TIGR00926 2A1704 Peptide:H+ sy 86.0 3.9 8.4E-05 40.9 8.5 69 300-374 5-74 (654)
287 KOG2601 Iron transporter [Inor 85.8 2.6 5.7E-05 38.3 6.4 150 41-195 27-200 (503)
288 PF07672 MFS_Mycoplasma: Mycop 84.8 11 0.00024 32.6 9.4 101 84-185 143-254 (267)
289 TIGR00769 AAA ADP/ATP carrier 83.3 21 0.00044 34.2 11.6 147 45-193 268-436 (472)
290 KOG3880 Predicted small molecu 80.6 8.6 0.00019 34.2 7.3 105 84-193 290-401 (409)
291 KOG0637 Sucrose transporter an 78.3 1.6 3.4E-05 40.8 2.3 88 283-377 33-125 (498)
292 KOG3574 Acetyl-CoA transporter 77.3 6.9 0.00015 35.9 5.9 54 142-195 376-430 (510)
293 KOG3626 Organic anion transpor 77.0 2.8 6E-05 41.9 3.8 77 43-125 394-474 (735)
294 COG1971 Predicted membrane pro 75.5 43 0.00094 27.4 16.8 29 342-370 155-183 (190)
295 PRK11469 hypothetical protein; 73.9 49 0.0011 27.2 16.8 52 319-370 130-181 (188)
296 COG3559 TnrB3 Putative exporte 73.7 79 0.0017 29.5 19.7 82 141-231 164-257 (536)
297 TIGR02840 spore_YtaF putative 72.1 57 0.0012 27.2 16.5 48 319-367 153-202 (206)
298 KOG4332 Predicted sugar transp 71.1 52 0.0011 28.9 9.3 98 84-181 284-391 (454)
299 TIGR02230 ATPase_gene1 F0F1-AT 69.7 30 0.00065 25.0 6.6 28 342-369 61-88 (100)
300 PF05978 UNC-93: Ion channel r 68.0 59 0.0013 25.8 10.9 37 334-371 48-84 (156)
301 KOG3810 Micronutrient transpor 67.5 44 0.00095 30.6 8.5 112 81-195 270-384 (433)
302 KOG2881 Predicted membrane pro 64.8 93 0.002 26.9 10.7 28 343-370 259-286 (294)
303 PF07857 DUF1632: CEO family ( 63.3 1E+02 0.0022 26.8 13.7 20 220-239 119-138 (254)
304 PF02990 EMP70: Endomembrane p 58.1 1.2E+02 0.0027 29.5 10.6 28 325-353 299-326 (521)
305 COG5336 Uncharacterized protei 54.6 17 0.00036 26.4 3.0 27 88-114 48-75 (116)
306 COG0477 ProP Permeases of the 51.1 1.6E+02 0.0034 25.2 10.1 44 323-367 39-82 (338)
307 COG2233 UraA Xanthine/uracil p 49.3 93 0.002 29.5 7.8 81 39-127 14-94 (451)
308 PF02694 UPF0060: Uncharacteri 47.1 38 0.00082 24.6 3.9 48 84-131 56-103 (107)
309 PF06912 DUF1275: Protein of u 45.5 1.8E+02 0.0039 24.2 11.2 21 175-195 167-187 (209)
310 PRK13629 threonine/serine tran 42.4 3.1E+02 0.0067 26.1 13.4 31 163-193 17-47 (443)
311 KOG1237 H+/oligopeptide sympor 41.5 1E+02 0.0022 30.6 7.2 63 134-196 457-520 (571)
312 PF00854 PTR2: POT family; In 40.9 1E+02 0.0022 28.3 7.0 85 47-132 37-122 (372)
313 PF11947 DUF3464: Protein of u 40.8 42 0.00091 26.4 3.6 51 133-185 95-145 (153)
314 PF01733 Nucleoside_tran: Nucl 39.3 9.9 0.00021 34.1 0.0 20 327-347 186-205 (309)
315 PF07760 DUF1616: Protein of u 38.7 2.8E+02 0.0061 24.6 11.9 57 138-194 22-78 (287)
316 PRK02237 hypothetical protein; 38.0 66 0.0014 23.5 3.9 48 84-131 58-105 (109)
317 COG2836 Uncharacterized conser 31.5 3.3E+02 0.007 23.2 13.2 42 321-363 162-206 (232)
318 PF06341 DUF1056: Protein of u 31.4 88 0.0019 20.3 3.3 36 134-169 27-62 (63)
319 PF11299 DUF3100: Protein of u 29.0 72 0.0016 27.0 3.4 50 143-193 179-229 (241)
320 PF03219 TLC: TLC ATP/ADP tran 28.8 5.5E+02 0.012 24.9 13.7 51 145-195 292-344 (491)
321 COG5547 Small integral membran 27.6 1.5E+02 0.0032 18.8 3.7 38 112-151 8-47 (62)
322 COG1268 BioY Uncharacterized c 27.6 1.1E+02 0.0024 25.0 4.2 24 88-111 88-111 (184)
323 PF02694 UPF0060: Uncharacteri 26.2 1.2E+02 0.0025 22.2 3.6 50 322-372 53-102 (107)
324 KOG4830 Predicted sugar transp 26.1 1E+02 0.0022 27.0 3.8 64 288-357 23-94 (412)
325 PF04281 Tom22: Mitochondrial 25.9 2.8E+02 0.0061 21.4 5.9 28 157-184 58-85 (137)
326 PF09527 ATPase_gene1: Putativ 25.8 1.7E+02 0.0037 18.1 6.6 26 341-366 18-43 (55)
327 COG4769 Predicted membrane pro 24.5 66 0.0014 25.5 2.3 53 90-148 81-133 (181)
328 PF11151 DUF2929: Protein of u 23.8 2E+02 0.0044 18.3 5.9 28 212-239 28-55 (57)
329 TIGR00801 ncs2 uracil-xanthine 23.5 5.7E+02 0.012 24.1 8.8 96 69-172 31-132 (415)
330 PRK02237 hypothetical protein; 23.2 1.9E+02 0.0042 21.2 4.2 49 323-372 56-104 (109)
331 PF03773 DUF318: Predicted per 22.6 5.6E+02 0.012 22.9 12.2 6 203-208 107-112 (307)
332 COG1230 CzcD Co/Zn/Cd efflux s 21.7 5.8E+02 0.013 22.8 9.2 70 49-130 33-105 (296)
333 PF02632 BioY: BioY family; I 20.5 1.9E+02 0.0042 22.7 4.2 25 89-113 60-84 (148)
334 KOG2927 Membrane component of 20.3 67 0.0014 29.0 1.8 21 173-193 217-237 (372)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=244.48 Aligned_cols=289 Identities=20% Similarity=0.228 Sum_probs=250.4
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
..+..++.+.++.|............+|++.+|+|+|..+ .|+..+.|.++..++.|+...+.||+.||++++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 4456778888899999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
...++.++++++++++|++.++++|++.|+..|.+.+. .++.++..|+++|++++++...+..++.++|.+++.++.+
T Consensus 84 ~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~- 162 (394)
T COG2814 84 LLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ- 162 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-
Confidence 99999999999999999999999999999999988885 9999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccc
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
.+|||..| ...+.++++..+. +..+| |+..+++.+ . +..+.
T Consensus 163 ------~~GWR~~F---------~~ia~l~ll~~~~~~~~lP--~~~~~~~~~-~--------------------~~~~~ 204 (394)
T COG2814 163 ------LFGWRATF---------LAIAVLALLALLLLWKLLP--PSEISGSLP-G--------------------PLRTL 204 (394)
T ss_pred ------HhhHHHHH---------HHHHHHHHHHHHHHHHhCC--CccCCCCCC-c--------------------chhHH
Confidence 66666665 7777777776554 56677 211111110 0 11234
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 015847 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (399)
.+.+|+|+++...+..++.....+...+++..++++. .|++++..++++..++++.++++. +++++.|| +.++
T Consensus 205 ~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~~ 277 (394)
T COG2814 205 LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPRR 277 (394)
T ss_pred HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cchh
Confidence 5789999999999999999999999999999888887 899999999999999999999995 99999999 8888
Q ss_pred HHHHHHHHHHHHHhHHhHHHHHH
Q 015847 356 VARIAGVLTIPLLTSYPYIAMLS 378 (399)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~ 378 (399)
.+.....+.++.++.+.+.....
T Consensus 278 ~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 278 ALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcchH
Confidence 88888788877777776665544
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1e-31 Score=236.08 Aligned_cols=326 Identities=20% Similarity=0.156 Sum_probs=252.6
Q ss_pred CCChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhH
Q 015847 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (399)
+.+++.++.+++++...++.+..++...|.+.++.++|..| .|++.+++.+.+.++..+.|.++||.+.|+.+.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~ 98 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeeh
Confidence 34455666788888888999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh--hhh
Q 015847 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFL 193 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~--~~l 193 (399)
+++++.++.+++++++++.+.+.++.+++|..+|...| +...++.|++++|||+..++.+++.++|+.+.|++. +++
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999766 699999999999999999999999999999999999 888
Q ss_pred cCCCCCCCCcccccccccCCcchhhHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhcc--cc
Q 015847 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE--GR 270 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 270 (399)
.. +.+||..| ++.++++++ .++.++..+++|+...-++-++-.. +..+.. +++++.+ ..
T Consensus 179 ~~-------~~~w~~~f---------~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~-d~~e~~-~~~~~~~~ls~ 240 (448)
T COG2271 179 AF-------HGGWRAAF---------YFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG-DPLEIY-EEEKENEGLTA 240 (448)
T ss_pred Hh-------ccchhHHH---------HHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc-Cchhhh-hhhccCCCccH
Confidence 76 44555555 777776665 4555667788776543222111000 111100 0000000 00
Q ss_pred CCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (399)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
...-.+.+++||.+|.+.+..++....-.+...+.|.|+.+. .|++...++...+.+=.+++.+.+ +.||++||
T Consensus 241 ~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~L-l~GwlSDk 314 (448)
T COG2271 241 WQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTL-LAGWLSDK 314 (448)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHH-HHHHHHHH
Confidence 112345678999999999999999999999999999999997 899999999999999999999995 99999999
Q ss_pred h--cchhHHHH-HHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhh
Q 015847 351 L--GPIMVARI-AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVV 392 (399)
Q Consensus 351 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
+ |||....+ .++...+++..+...+.........+++..++.
T Consensus 315 lfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 315 LFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 5 55555443 344444444444444433334444444444443
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=4.4e-30 Score=245.63 Aligned_cols=306 Identities=15% Similarity=0.116 Sum_probs=239.6
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+..+..+++..++...+..+++..+|.+.+++|.+..+ .+|+.+++.++..++++++|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45566788899999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhc-cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
++..++++.+++++|++.++++|+++|++.+...+. ...+.+.+ |+++|++++|+......+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999998887774 67776665 68999999999999999999999999999998
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhh---------hhhhhhhh-----
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALESASA----- 262 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~----- 262 (399)
.+|||+.| ++...+.++. ++..+.+||++++..++.+...... ...+...+
T Consensus 157 -----~~gwr~~f---------~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 -----HFYWGSVF---------LINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred -----cCChHHHH---------HHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 56676665 5555444443 3345566775433222211111000 00000000
Q ss_pred -----------------hhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhH
Q 015847 263 -----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (399)
Q Consensus 263 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (399)
...+.+.+.+....+++|+|.+....+..++......+...++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 00112223344456788999988877777777777777777889888876 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhH
Q 015847 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
|..+.+..++..++. ++.+++.||+++|+.+..+.++..++...+..
T Consensus 298 g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 298 GMFMLPVMVASGFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 48899999999999888888777776665543
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=1.7e-29 Score=236.19 Aligned_cols=307 Identities=14% Similarity=0.068 Sum_probs=227.8
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
+++.++.+++.+++++++....+...|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 79 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGI 79 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHH
Confidence 456667788888899999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.++..++.+++++++|++.+++.|++.|++.+...|. ..++.|++|+++|++++++++.+.++|..++|.+++++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 80 MVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998888775 788999999999999999999999999999999999887411
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCC-CCccchhhhhhhhhh---hhhhhccccCC
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDD-DDSCDVSYDALESAS---AEVKEEEGREA 272 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~ 272 (399)
+ ..+..|||+.| .+.++..++. .+..+++||+|++.+.. +++++...+..+... ++.++..++.+
T Consensus 160 ~-~~~~~gwr~~f---------~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (412)
T TIGR02332 160 G-LMALKGWQWLF---------LLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAA 229 (412)
T ss_pred C-CCCccchhHHH---------HHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhcccccccccccccccc
Confidence 0 00124555554 7766666554 44456678877542211 111111101111000 00000000000
Q ss_pred ----cccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 273 ----TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (399)
Q Consensus 273 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (399)
..++++ .+|.++...+.+++.......+.+++|.++++. +.+++..+++.......++.+++.. +.+++.
T Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l~ 303 (412)
T TIGR02332 230 MPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRHS 303 (412)
T ss_pred ccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHHh
Confidence 112233 357788878888887778888889999998762 1467788889999999999999984 899999
Q ss_pred HHhcchhH-HHHHHHHHHHH
Q 015847 349 RILGPIMV-ARIAGVLTIPL 367 (399)
Q Consensus 349 ~~~~~~~~-~~~~~~~~~~~ 367 (399)
||+++|+. ......+..++
T Consensus 304 dr~~~r~~~~~~~~~~~~~~ 323 (412)
T TIGR02332 304 DRLKERKHHTALPYLFAAAG 323 (412)
T ss_pred cccCccHHHHHHHHHHHHHH
Confidence 99987664 33333333333
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=1.6e-30 Score=247.33 Aligned_cols=297 Identities=13% Similarity=0.060 Sum_probs=216.5
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (399)
+....+.++..+.+...+.+..|.+.+++|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.+++
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 33566677777888999999999999999999999 999999999999999999999999999999998888887
Q ss_pred HHHHHHHhc-----cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 123 ~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
++..++.++ +++++.+++.|++.|++.+...|. .++++|++|+++||+++|+...+.++|.++++.++.++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 777665554 689999999999999998887775 89999999999999999999999999999999998776641
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCc-c
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-P 274 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 274 (399)
.. ..+||. .+.+.+++.++. ++.+++.+++|++....++++ ...+..+...+..++++..... .
T Consensus 185 ~~----~~~~~~---------~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 250 (467)
T PRK09556 185 FF----DGHVIG---------MFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQIF 250 (467)
T ss_pred hc----cCcchh---------HHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHHH
Confidence 00 012433 335555554443 333444565543322111100 0000000000000000000001 1
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
.+..+++|.+|...+..++......+...++|.|+.+. +|+++.+++...+...++.+++. ++.++++||+++|
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r 324 (467)
T PRK09556 251 VEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGR 324 (467)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCC
Confidence 12367899999988888888877778888999998776 89999999999998899999998 4999999999988
Q ss_pred hHHHHHHHHHH
Q 015847 355 MVARIAGVLTI 365 (399)
Q Consensus 355 ~~~~~~~~~~~ 365 (399)
+..........
T Consensus 325 ~~~~~~~~~~~ 335 (467)
T PRK09556 325 RALVACIALAL 335 (467)
T ss_pred chHHHHHHHHH
Confidence 87665544333
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=5e-29 Score=231.90 Aligned_cols=275 Identities=16% Similarity=0.158 Sum_probs=209.8
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+..++.+.+..+..........+.+|.+.+++|.++.+ .++..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 33444445555554444445667789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
++.+++++.+++++|++.+++.|+++|++.+...+. .+++.|++|+++|++++|+...+.++|..++|++++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~--- 158 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ--- 158 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---
Confidence 999999999999999999999999999998887775 8999999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (399)
..|||+.| ...++..++.... ...+||.++++ ++ + .++.++
T Consensus 159 ----~~gw~~~f---------~~~~~~~~l~~~~~~~~~~~~~~~~---~~--~--------------------~~~~~~ 200 (390)
T PRK03545 159 ----YLGWRTTF---------LAIGGGALITLLLLIKLLPLLPSEH---SG--S--------------------LKSLPL 200 (390)
T ss_pred ----HhcHHHHH---------HHHHHHHHHHHHHHHHhCCCCCCCC---cc--h--------------------HHHHHH
Confidence 45565554 6666655554333 34455543211 00 0 012345
Q ss_pred ccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 015847 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (399)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (399)
.+|+|.++......++..........+++.++.+. .|+++.+++.+....+++.++++. ..+++.||.++++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQV-----AGLSENFATLLLLLFGGAGIIGSV-LFSRLGNRHPSGFLL 274 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHH-HHHHHhhccchhHHH
Confidence 77888877655555554444444555666666554 688999999999999999999985 889999999877653
Q ss_pred HHHHHHHHHHH
Q 015847 358 RIAGVLTIPLL 368 (399)
Q Consensus 358 ~~~~~~~~~~~ 368 (399)
.+..+..++.
T Consensus 275 -~~~~~~~~~~ 284 (390)
T PRK03545 275 -IAIALLLVCL 284 (390)
T ss_pred -HHHHHHHHHH
Confidence 4444444433
No 7
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=231.91 Aligned_cols=285 Identities=14% Similarity=0.106 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhcc---CccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
+.+...+++.+++.++...+....|.+.++++. +..+ ....+...+...++..++++++|+++||+|||+++..
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 344456677888999999988889999999863 3332 0113344455566667999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHH--------HHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHH
Q 015847 118 GTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 188 (399)
+.++++++++++++++++. .++++|+++|++.|...+. .++++|++|+++|++..++.+.+...|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 5889999999998887774 999999999999999999988888888888887
Q ss_pred hhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhcc
Q 015847 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (399)
Q Consensus 189 i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (399)
+...+..... -. ....++||.+|.+.++++++.......+||+++++.++.
T Consensus 179 ~~~~~~~~~~-------~~-~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~--------------------- 229 (432)
T PRK10406 179 VVVVLQQTLE-------DA-ELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRAL--------------------- 229 (432)
T ss_pred HHHHHHHhCC-------HH-HHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhh---------------------
Confidence 7655542100 00 000345566667777776665544455566543211000
Q ss_pred ccCCcccccccccchhHHHHHHHHHH-HhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 269 GREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (399)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l 347 (399)
++..+.++++++++.+...+...+. ......+..++|.|+.+. +|++..+.+.......+...+++. +.+++
T Consensus 230 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l 302 (432)
T PRK10406 230 -KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-----AGMHANVASGIMTAALFVFMLIQP-LIGAL 302 (432)
T ss_pred -cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0012355677888777655554433 555666778889888665 788888888888888888888875 77899
Q ss_pred HHHhcchhHHHHHHHHH
Q 015847 348 ERILGPIMVARIAGVLT 364 (399)
Q Consensus 348 ~~~~~~~~~~~~~~~~~ 364 (399)
.||++||+.+..+..+.
T Consensus 303 ~Dr~grr~~~~~~~~~~ 319 (432)
T PRK10406 303 SDKIGRRTSMLCFGSLA 319 (432)
T ss_pred HHHcCchHHHHHHHHHH
Confidence 99999998877665543
No 8
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1.5e-28 Score=235.64 Aligned_cols=303 Identities=16% Similarity=0.197 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
.+..+++..++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 345666788888888899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCC
Q 015847 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (399)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 200 (399)
..++.++++++++++.+++.|+++|++.+...+. .+++.|++|+++|++++++......+|..+||.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 9999999999999999999999999998887775 9999999999999999999999999999999999999988
Q ss_pred CCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhh-------------hhhhhhhh----
Q 015847 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSY-------------DALESASA---- 262 (399)
Q Consensus 201 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~-------------~~~~~~~~---- 262 (399)
..|||+.| ++.+...++.. +..+..||++++..++.+...... +..+....
T Consensus 152 --~~~w~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 --NYHWRWIF---------LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred --CcCceehh---------hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 56676665 55544444433 334456664432222111100000 00000000
Q ss_pred ---------------hhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHH
Q 015847 263 ---------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (399)
Q Consensus 263 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 327 (399)
..++.+.+++....+.+++|+++...+..++..........++|.|+++. +|+++.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 00111122233345678899988888888888887788888899998876 7899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
......++..++.. +.+++.||+++|+.+..+..+.+++..++.
T Consensus 296 ~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 296 HILPVGLAPMLSSP-IAGRMGDKIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999984 889999999999998888887777766654
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=6.1e-28 Score=224.28 Aligned_cols=269 Identities=18% Similarity=0.190 Sum_probs=205.2
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
.|+.++.+....+..........+.+|.+.+++|.++.+ .++..+++.++..+++++.|+++||+|||++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 345545555554444545556667789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.++.+++.++++++++++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+.++|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999998887775 8899999999999999999999999999999999999998
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccc
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (399)
.+|||+.| .+.++++++..+. ....||+++++++ + ....+
T Consensus 170 -----~~gw~~~f---------~~~~~l~~~~~l~~~~~~p~~~~~~~~-----~--------------------~~~~~ 210 (394)
T PRK10213 170 -----LIGWRNVF---------NAAAVMGVLCIFWIIKSLPSLPGEPSH-----Q--------------------KQNTF 210 (394)
T ss_pred -----hcCHHHHH---------HHHHHHHHHHHHHHHHHCCCCCccccc-----c--------------------hhHHH
Confidence 55665555 5555555443333 3345654321100 0 01234
Q ss_pred cccccchhHHHHHHHHHHHhhhhhHHHHH-HHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 015847 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (399)
+.+++|.++...+..++..........++ |.|..+ +|+++.+.+..+...+++.++++. +.+++.||.++ +
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~iig~~-~~~~l~~r~~~-~ 282 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL------AGFGVDGLTLVLLSFGIASFVGTS-LSSFILKRSVK-L 282 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhccch-h
Confidence 56788888876666555555555555555 555433 788999999999999999999984 88889998544 4
Q ss_pred HHHHHHH
Q 015847 356 VARIAGV 362 (399)
Q Consensus 356 ~~~~~~~ 362 (399)
.+..+..
T Consensus 283 ~l~~~~~ 289 (394)
T PRK10213 283 ALAGAPL 289 (394)
T ss_pred HHHHHHH
Confidence 4333333
No 10
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=2.7e-28 Score=226.79 Aligned_cols=285 Identities=18% Similarity=0.182 Sum_probs=223.3
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+....+....+....+.....+.+|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 3444455555666777888889999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
+.+++.+.++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccc
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
..||| ..+.+.++..++..+. .+..||+++++++++. + +..+..++.
T Consensus 155 ---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~~~ 202 (385)
T TIGR00710 155 ---WLSWH---------AIFAFLSLAGILLSALIFFILPETLPYEARIQI--S------------------TYFETFLLL 202 (385)
T ss_pred ---HcCHH---------HHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCH--H------------------HHHHHHHHH
Confidence 34444 4446655555544333 4455665432211100 0 001133456
Q ss_pred cccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
+++|+++...+...+..........+.|.++.+. +|+++.+.+.+.....++.++++. +.+++.||+++|+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI-----MGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHH
Confidence 7788888776666665555566666667766544 788999999999999999999884 8899999999999888
Q ss_pred HHHHHHHHHHhHHhH
Q 015847 359 IAGVLTIPLLTSYPY 373 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~ 373 (399)
.+..+..++..++..
T Consensus 277 ~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 277 MGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHH
Confidence 877776666555543
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.7e-28 Score=231.13 Aligned_cols=280 Identities=16% Similarity=0.159 Sum_probs=213.1
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+......+..++..+........+|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 3444556677777777778889999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
+.+++.++++++++++.+++.|++.|++.|...+ ..+++.|++|+++|++++++.+.+.++|..++|.+++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---- 172 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---- 172 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999998877666 48999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc-c-c
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-K-K 276 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 276 (399)
.+|||+.| .+.++..++. ++..+.+||++++...++..+... +. ++..++. +.+..+..+ . .
T Consensus 173 ---~~gw~~~f---------~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~ 237 (434)
T PRK11663 173 ---HYGWRYGM---------MIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DA-LELAQQQ-EGAGLSRKEILTK 237 (434)
T ss_pred ---cccHHHHH---------HHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cc-cccchhc-cccCCChhhhHHH
Confidence 44555444 6666555443 334456777654321111000000 00 0000000 000001111 1 1
Q ss_pred cccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015847 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (399)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (399)
..+++|.++...+..++..........++|.|+.+. +|++..+++...+...++..+++. +.+++.||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~~-~~g~l~dr~ 306 (434)
T PRK11663 238 YVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSET-----LGVDLVTANSAVSMFELGGFIGAL-VAGWGSDKL 306 (434)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHhhhHHHh
Confidence 256788888877777777777777788899988665 789999999999999999999994 889999998
No 12
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=3.8e-28 Score=228.16 Aligned_cols=302 Identities=15% Similarity=0.153 Sum_probs=225.0
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
...+..+...+++..+......+..|.+++++|.++.+ .++..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34455666777777888888999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---hccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 120 ~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
++++++.+++ .++++++.++++|+++|++.+...+. .+++.|..++++|.+.++..+....+|..++|.+++.+..
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999775 46889999999999999998887775 8888998777777778999999999999999999887652
Q ss_pred CCCC---------C--CCcccccccccCCcchhhHHHHHHHHH-HHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhh
Q 015847 196 PAEK---------Y--PNLFSSESLFGKFPYFLPCLCISLFAF-GVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASA 262 (399)
Q Consensus 196 ~~~~---------~--~~~~gw~~~f~~~~~~~~~~~~~~~~~-~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (399)
...+ . ....+||..+ ..+|+.+++....... +.++. ...+||.++++ +++ .+
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~--~~~-~~----------- 243 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN--HSD-AK----------- 243 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--ccc-cc-----------
Confidence 1000 0 0012566554 3467777764333322 22222 22334322110 000 00
Q ss_pred hhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhh-cCCcccCccccchhhHHHHHHHHHHHHHHHHH
Q 015847 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWA-NSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (399)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 341 (399)
+.+.....++++++|.++...+..++......+...+++.|+ ++. +|+++.+++..+....++.++++.
T Consensus 244 -----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~-----~g~s~~~ag~~~~~~~~~~~vG~~ 313 (438)
T PRK10133 244 -----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI-----PGMTAGFAANYLTGTMVCFFIGRF 313 (438)
T ss_pred -----ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000112345678899888777777777777776777778775 333 799999999999999999999994
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHhHHhH
Q 015847 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
.++++.||+++|+++..+..+..+.+++..+
T Consensus 314 -~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 314 -TGTWLISRFAPHKVLAAYALIAMALCLISAF 344 (438)
T ss_pred -HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999988887776655554433
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=3.5e-28 Score=227.49 Aligned_cols=302 Identities=13% Similarity=0.150 Sum_probs=218.2
Q ss_pred CCChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhH
Q 015847 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (399)
+.+++.+...++..+.+.++.....+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34566677888899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.++.+++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887774 9999999999999999999999999999999999999886
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhh---hhccccCC
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV---KEEEGREA 272 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 272 (399)
..+ .+|+..+.+.++..++.++....+||++++.++++++.+ ..+..++..++. ++..+...
T Consensus 162 -------~~~-------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 -------VWG-------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred -------hcC-------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhh
Confidence 222 124444466555555555555667776543221111100 000000000000 00000000
Q ss_pred ccccccc-ccc-hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 273 TPKKSLL-KNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (399)
Q Consensus 273 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
...++.. +++ .+........+.+........++|.|+.+. +|+++.+.+.+....+++.++++. +.+++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0001111 111 122223333333344445556677777654 789999999999999999999984 88999999
Q ss_pred hcchhHHHHHHHHHH
Q 015847 351 LGPIMVARIAGVLTI 365 (399)
Q Consensus 351 ~~~~~~~~~~~~~~~ 365 (399)
+++|+.+..+.....
T Consensus 301 ~g~~~~~~~~~~~~~ 315 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQ 315 (405)
T ss_pred hCchhhhHHHHHHHH
Confidence 999998877766553
No 14
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=4.6e-28 Score=224.65 Aligned_cols=280 Identities=18% Similarity=0.256 Sum_probs=219.2
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.++.+....++.........+.+|.+.+++|.+..+ .++..+++.++..+++++.|+++||+|||+++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 3455677778888888888999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
+.+++.+++++++|++.+++.|++.|++.+...+. ..++.|++++++|+++++....+..+|..++|.+++++.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 99999999999999999999999999998887665 7888999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccc
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
..|||+.| .+.++..++..+ ....+||.+++.+ . +.. ...+.
T Consensus 153 ---~~gwr~~f---------~~~~~~~~~~~~~~~~~lp~~~~~~~--~---~~~--------------------~~~~~ 195 (382)
T PRK10091 153 ---EFSWRYTF---------LLIAVFNIAVLASIYFWVPDIRDEAK--G---GLR--------------------EQFHF 195 (382)
T ss_pred ---hccHHHHH---------HHHHHHHHHHHHHHHHhCCCCCcccc--c---CHH--------------------HHHHH
Confidence 45555544 666655554433 3455676532110 0 000 01123
Q ss_pred cccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
++++..+......++..........+++.++.+. +|+++.+.+.+.+..+++.++++. +.+++.||+++++.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFI-----SGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAA 269 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHH
Confidence 5666666555444443333334444555555544 788999999999999999999995 8899999999999988
Q ss_pred HHHHHHHHHHhHHhH
Q 015847 359 IAGVLTIPLLTSYPY 373 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~ 373 (399)
.+..+.+++.+.+..
T Consensus 270 ~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 270 VTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887777776655443
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=3.2e-28 Score=229.35 Aligned_cols=294 Identities=17% Similarity=0.275 Sum_probs=217.6
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
+++.+...++..+.+.++.....+..|.+.+++|.++.+ .++..+++.++..+++++.|+++||+|||+++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 344566777788888888888899999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.++.+++.++++++++++.++++|++.|++.+...+. ..++.|++|+++|+++.++...+..+|..++|.+.+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-- 167 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-- 167 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc--
Confidence 9999999999999999999999999999998877764 8999999999999999999999999999999999998887
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccc
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (399)
..|||+.| .+..+..++........||++++.+++.++.+ ++.++.........++
T Consensus 168 -----~~~w~~~f---------~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 223 (426)
T PRK12307 168 -----AYGWRAAF---------FVGLLPVLLVIYIRARAPESKEWEEAKLSGKG----------KHSQSAWSVFSLSMKG 223 (426)
T ss_pred -----cCCHHHHH---------HHHHHHHHHHHHHHHHCCCChHHHHhhhhccc----------cccccchhhhhHHHHH
Confidence 45565554 54433333222222233443321111000000 0000000001123456
Q ss_pred ccccchhHHHHHHHHH---HHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 278 LLKNWPLMSSIIVYCV---FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 278 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
.+++|.++........ ..........++|.|+.+ .|+++.+.+.+.+..+++.++++. +.+++.||++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~ 296 (426)
T PRK12307 224 LFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGLK 296 (426)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccH
Confidence 7777777654433222 222223355677877765 578888999999999999999984 889999999999
Q ss_pred hHHHHHHHHHHHHHhHH
Q 015847 355 MVARIAGVLTIPLLTSY 371 (399)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ 371 (399)
+....+.++..+..+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~ 313 (426)
T PRK12307 297 KTFSIGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98888877766655444
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=2.7e-28 Score=223.62 Aligned_cols=247 Identities=15% Similarity=0.064 Sum_probs=187.1
Q ss_pred ccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccch
Q 015847 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (399)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (399)
.....+.+.+|.+.+|+|.++.+ .|++.+++.+++.+++++.|+++||+|||+++..+......+.......++
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 78 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFN 78 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 34456788999999999999999 999999999999999999999999999999876655555444433333479
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 135 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
++.+++.|+++|++.+...+....++|++|+++|++++++.+.+..+|..+++++++++.+ .+|||..|
T Consensus 79 ~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~gWr~~f---- 147 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGGLQLLI---- 147 (368)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccchHHHH----
Confidence 9999999999999988765567777999999999999999999999999999999999987 45666555
Q ss_pred chhhHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHH
Q 015847 215 YFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (399)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (399)
.+.++++++ .++..+.+||++++++++. +.. + ..++.++++++|.+|...+.+++
T Consensus 148 -----~~~~~l~~~~~~~~~~~lp~~p~~~~~~~---~~~--------~--------~~~~~~~ll~~~~~~~~~~~~~~ 203 (368)
T TIGR00903 148 -----IPIAAVAAAGIILVLAALPALPFQAAEGF---GFK--------D--------AVKEFGALAGRKDLWIIGAILGF 203 (368)
T ss_pred -----HHHHHHHHHHHHHHHHHcCCCCCCCCCCc---chH--------H--------HHHHHHHHHcChhHHHHHHHHHH
Confidence 666666554 4445667888765432110 000 0 00135678899999999999999
Q ss_pred HHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
......++.+++|.|+.+ .|++.. .+.......+.+.++ .+++.||..|
T Consensus 204 ~~~~~~~~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g----~~~~~d~~~r 252 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRP------AGLEDI-AGDAVALAILAGLIG----VAVIPDRVAR 252 (368)
T ss_pred HHHHHHHHHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHH----HHHhhHHhhh
Confidence 999999999999999965 456654 555555555555544 3566666543
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=2.7e-28 Score=227.25 Aligned_cols=277 Identities=17% Similarity=0.153 Sum_probs=215.4
Q ss_pred HHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh
Q 015847 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (399)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (399)
++...+...+....|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 345566677788889999999999999 99999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccccccc
Q 015847 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (399)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~ 209 (399)
++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ ..+||
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~-- 148 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------HFSWQ-- 148 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------hCCch--
Confidence 9999999999999999998887775 9999999999999999999999999999999999999887 34444
Q ss_pred ccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHH
Q 015847 210 FGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 288 (399)
Q Consensus 210 f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (399)
..+...++..++..+. .+..||++++.+..+++.+....+......+.+++++......++.+++|+++...
T Consensus 149 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
T TIGR00893 149 -------WAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLA 221 (399)
T ss_pred -------HHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHH
Confidence 4446666665554443 34456654332211111110000000000001111122333456778899999888
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 015847 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (399)
+..++.......+..++|.|+.+. +|.++.+.+.+.....++..++.. +.+++.||+++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 282 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Confidence 888888888888888999888776 788899999999999999999984 8899999999885
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=4.3e-28 Score=230.51 Aligned_cols=282 Identities=13% Similarity=0.108 Sum_probs=204.7
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
++.+...+...++.........+..|.+.+++|.+..+ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34445556666666666677888899999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
++.+++.++++++++++.++++|++.|++.+...+...+++|++|+++|++++++.+...++|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776555667889999999999999999877777777776666544321000
Q ss_pred --CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccc
Q 015847 200 --YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (399)
Q Consensus 200 --~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (399)
.....|||+.| .+.+++.++..+..+++++++++...++ .+ +. .+.++.+.....++
T Consensus 189 ~~~~~~~gWr~~f---------~i~g~l~l~~~l~~~~~~~~~p~~~~~~--~~-------~~---~~~~~~~~~~~~~~ 247 (476)
T PLN00028 189 AGAPSFTAWRIAF---------FVPGLLHIIMGILVLTLGQDLPDGNYRE--LK-------KS---GTMPKDSFSKVLRY 247 (476)
T ss_pred cCCcchhhhHHHH---------HHHHHHHHHHHHHHHHHcCcCCCCchhh--HH-------hc---CccccccHHHHHHH
Confidence 00023455444 7777666655554444444322111000 00 00 00000000112345
Q ss_pred ccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
.++++++|...+.+++.......+..++|.|+.+. +|+++.+++.+.+..+++..++++ +.++++||+++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r 318 (476)
T PLN00028 248 GVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDR-----FGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARR 318 (476)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHh
Confidence 67788888777776666655566677788887654 789999999999999999999995 899999999765
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=3.4e-28 Score=224.24 Aligned_cols=288 Identities=16% Similarity=0.119 Sum_probs=221.4
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
+....++..++.....+.+|.+..+++.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 45567777788888889999999999999998 999999999999999999999999999999999999998888
Q ss_pred HHHHhccc-----hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 126 ~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
.++.++.+ +++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88887777 9999999999999998888875 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccc
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (399)
..|||.. +...++..++..+....+++++++++++++.+++. .++..+..+..+
T Consensus 154 ---~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ---TLGIKWA---------IWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ---HhhHHHH---------HHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 4455444 46655555544444333332211111110000000 000111344567
Q ss_pred ccchhHHHHHHHHHHHhhhhhHH-HHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
++|.++...+..++......... .+.|.|..+. +|.++.+.+.+....+++..++.. ..+++.||.++++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHH
Confidence 88888887777776666665555 6778777654 688999999999999999999885 7889999999999888
Q ss_pred HHHHHHHHHHhHHhHHH
Q 015847 359 IAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (399)
.+..+.++++..+.+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 77777666666655544
No 20
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=3.6e-28 Score=223.02 Aligned_cols=289 Identities=25% Similarity=0.422 Sum_probs=220.7
Q ss_pred HHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
++..++.........+.+| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 4566777778888899999 888999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcc
Q 015847 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (399)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~ 204 (399)
.++..++++.+.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+ ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~ 148 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------YF 148 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HC
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------cc
Confidence 666666688889999999999998888775 9999999999999999999999999999999999999997 55
Q ss_pred cccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCc-ccccccccc
Q 015847 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNW 282 (399)
Q Consensus 205 gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 282 (399)
|||..| ++.++..++..+. ..++++++++++.++++++. ++.++... ..+..+++|
T Consensus 149 ~~~~~~---------~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 206 (352)
T PF07690_consen 149 GWRWAF---------LISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKNP 206 (352)
T ss_dssp HHCCHH---------HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHH
T ss_pred cccccc---------ccccchhhhhhhhHhhhhhhcccccccccccccc-------------cccccccccccccccccc
Confidence 555554 7777776665543 34555544433332221110 00001111 255667777
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (399)
.+|......++..+.......+.|.|+.+. +|++ ..+.+.+....++...+++. +.+++.||+++++......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 280 (352)
T PF07690_consen 207 VLWILLIAFFLFFFVFSGFSFFLPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGSL-LAGRLSDRFGRRRRLLIAI 280 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhhcccchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHH
Confidence 777555666666666667888888886665 7888 78999999999999999884 8899999999877777766
Q ss_pred HHHHHHHhHHhHHHH
Q 015847 362 VLTIPLLTSYPYIAM 376 (399)
Q Consensus 362 ~~~~~~~~~~~~~~~ 376 (399)
....+....+.....
T Consensus 281 ~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 281 LLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHCCSHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666555554443
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=1.1e-27 Score=224.29 Aligned_cols=292 Identities=16% Similarity=0.078 Sum_probs=218.3
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
+++..+...+...++++++.....+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4455566777788888888888999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
+.++..++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccc
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
..+|| ..+.+.++..++.. +...++||++++.++++++.+.. + . ....
T Consensus 165 ------~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-------~-------~~~~ 213 (406)
T PRK11551 165 ------DAAWR---------HIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA--P-------V-------LRAL 213 (406)
T ss_pred ------ccCHH---------HHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh--h-------h-------HHHH
Confidence 34444 44466555444433 34456788654322211100000 0 0 0000
Q ss_pred ccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 015847 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (399)
.+..+.+..+......++..........++|.+..+ .|+++.+.+......+++.++++. +.+++.||.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~ 286 (406)
T PRK11551 214 FGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLRPRR 286 (406)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhHHH
Confidence 000111223333333344444445566677877765 688999999999999999999985 8899999999999
Q ss_pred HHHHHHHHHHHHHhHHhHH
Q 015847 356 VARIAGVLTIPLLTSYPYI 374 (399)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~ 374 (399)
.+..+.+...++++.+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 287 VVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8877666666655554433
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=1.7e-27 Score=221.45 Aligned_cols=262 Identities=13% Similarity=0.061 Sum_probs=207.3
Q ss_pred cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (399)
....+.+|.+.+|+|.|..+ .++..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+.+++++|++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 66789999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
+++.|+++|++.+...+. ..++.|++| ++|+++++.+..+..+|..+++.+++++.+. ..+||..+
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~~~~------ 166 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWYQTL------ 166 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHHHHH------
Confidence 999999999998887775 888899987 7899999999999999999999999998871 12565543
Q ss_pred hhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHh
Q 015847 217 LPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (399)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
...++..++.....+...++.+++ +++ + +...++.+++++.+...+.+++...
T Consensus 167 ---~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~--------------------~~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 167 ---AWWALPAVVALFAWWWQSAREVAS--SHK--T--------------------TTTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCCcc--ccC--C--------------------CcCCcccccCHhHHHHHHHHHHHHH
Confidence 333333333333222222211110 000 0 0012345567777777777777777
Q ss_pred hhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
.......++|.|+.+ +|+++.++|...+..+++.++++. ..+++.||.++++....+..+..++...+.
T Consensus 220 ~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~ 288 (393)
T PRK09705 220 GYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 777788889988765 688999999999999999999995 889999999999988888777766665543
No 23
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=1.6e-27 Score=220.22 Aligned_cols=285 Identities=12% Similarity=0.075 Sum_probs=212.3
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (399)
..++.++...+..++.........+..+.+.+ ++|+|++| .+++.+++.+++.++.++.|++.||+|.|+++.
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~ 104 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 34567777778888888888889998888876 89999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc-----chHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 117 MGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
++.++.++.++..+++ ++++.+++.|++.|++.+.+.+....+++++|+++||+++|+.....++|..+++++..
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999998876 89999999999999985545556999999999999999999997666666665555554
Q ss_pred hhc-----CCCCCCCCccccccccc----CCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhh
Q 015847 192 FLA-----QPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESAS 261 (399)
Q Consensus 192 ~l~-----~~~~~~~~~~gw~~~f~----~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (399)
.+. + .+||+.... ..+|+....+...+.++..+. ++.+++.++ . +.
T Consensus 185 ~~i~~~l~~-------~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~--~~-------------- 240 (462)
T PRK15034 185 LVIFVPVFA-------FLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-S--RA-------------- 240 (462)
T ss_pred HHHHHHHHH-------HhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-c--cc--------------
Confidence 332 3 344443321 222555445555555444433 334343221 1 00
Q ss_pred hhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHH
Q 015847 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 341 (399)
..++.++.+|+|+.|...+.+++.+..+.++..++|.|..+. + +............+...+.+
T Consensus 241 ---------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-----~--~~~~~l~~~~l~~l~~~l~r- 303 (462)
T PRK15034 241 ---------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-----F--PDVNILRLAFFGPFIGAIAR- 303 (462)
T ss_pred ---------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c--ChHHHHHHHHHHHHHHHHHH-
Confidence 011345688999999999999999989888988999987663 2 22223322334456677777
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHh
Q 015847 342 SLYPFLERILGPIMVARIAGVLTIPLLT 369 (399)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (399)
+++|+++||+|+++++.++.+...++..
T Consensus 304 plgG~LADRiG~~~vl~~~~i~~~i~~~ 331 (462)
T PRK15034 304 SVGGAISDKFGGVRVTLINFIFMAIFSA 331 (462)
T ss_pred HhhHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 5899999999999999888876666553
No 24
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=5.4e-28 Score=223.23 Aligned_cols=301 Identities=12% Similarity=0.100 Sum_probs=218.3
Q ss_pred HHHHHHHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
++..++..++.........+..|. +.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+.+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 345666777777778888999995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc-hHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC--
Q 015847 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (399)
Q Consensus 122 ~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~-- 198 (399)
.+++.+++++++ +++.+++.|+++|++.+...+..++++|++|+++|++++++.....++|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999876665568899999999999999999998888888877777766653100
Q ss_pred -CCCCcccccccccCCcchhhHHHHHHH-HHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccc
Q 015847 199 -KYPNLFSSESLFGKFPYFLPCLCISLF-AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (399)
Q Consensus 199 -~~~~~~gw~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (399)
+.....+||+.| . ...++. .+..++.....+|++++++++++.+... +. .. .++......+
T Consensus 157 ~~~~~~~~w~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~---~~~~~~~~~~ 219 (366)
T TIGR00886 157 AGLPAHLAWGWAF-----V---IVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG-AR-----WS---VGTGALGDQL 219 (366)
T ss_pred ccccccccccchh-----H---HHHHHHHHHHHHHHHHhcccCCcccccchhccccc-cc-----cc---ccchhHHHHH
Confidence 000123454443 0 222222 2333334445566543321111100000 00 00 0000111345
Q ss_pred cccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Q 015847 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (399)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 356 (399)
+.+++|+++...+..++..........+.|.|+.+. +|+++.+++.+.....+..++++ ++.+++.||+++|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 220 KVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGGARK 293 (366)
T ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhccchh
Confidence 577888888877777776666777788888888765 78899999999998899998888 488999999999887
Q ss_pred HHHHHHHHHHHHhHHh
Q 015847 357 ARIAGVLTIPLLTSYP 372 (399)
Q Consensus 357 ~~~~~~~~~~~~~~~~ 372 (399)
...+.....++..++.
T Consensus 294 ~~~~~~~~~~~~~~~~ 309 (366)
T TIGR00886 294 LLMSFLGVAMGAFLVV 309 (366)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7776666555554443
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=7.9e-28 Score=222.73 Aligned_cols=272 Identities=13% Similarity=0.111 Sum_probs=207.5
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
......+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+.+++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~ 91 (377)
T TIGR00890 18 YVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL 91 (377)
T ss_pred HHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH
Confidence 3556788899999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
+.++++|++.|++.+...+ ....+.|++| ++|+++.++...+.++|..+++.+.+.+.+ ..|||
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~------- 156 (377)
T TIGR00890 92 AALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN-------LEGVP------- 156 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-------cccHH-------
Confidence 9999999999999887655 4777888887 679999999999999999887767666665 34444
Q ss_pred chhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHH
Q 015847 215 YFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (399)
..+.+.++..++..+. .++++|++++..+++++.+ +.....++.+++|.++...+..++
T Consensus 157 --~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T TIGR00890 157 --AAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVLYLSFFL 216 (377)
T ss_pred --HHHHHHHHHHHHHHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHHHHHHHH
Confidence 4447766666655443 4445544322111110000 001133456778888777666666
Q ss_pred HHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhH
Q 015847 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
..........+++.|.++ +|.+..+.+.+.....++..+++. ..+++.||++||+.+..+..+.+++.+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T TIGR00890 217 NAVSGLLLIGLYKPYGQS------LGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGISAVGMAAMLF 289 (377)
T ss_pred HhHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 555555555556656443 677888889999999999999984 8899999999999988888877777766554
Q ss_pred HH
Q 015847 374 IA 375 (399)
Q Consensus 374 ~~ 375 (399)
.+
T Consensus 290 ~~ 291 (377)
T TIGR00890 290 IP 291 (377)
T ss_pred cc
Confidence 44
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=1.9e-27 Score=222.54 Aligned_cols=283 Identities=17% Similarity=0.151 Sum_probs=221.1
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+.+..++..+....+.+.+|.+.+++|.+..+ .++..+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455566666778888889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc
Q 015847 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (399)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~ 203 (399)
+.+.+.++++++.+++.|+++|++.+...+. .+.+.|.+|+++|++.+++......+|..++|.+++.+.+ .
T Consensus 91 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~ 163 (406)
T PRK15402 91 TCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------V 163 (406)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------c
Confidence 9999999999999999999999998887664 8899999999999999999988888999999999999987 4
Q ss_pred ccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccc
Q 015847 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (399)
Q Consensus 204 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (399)
.+||+.| .+.++..++..+ .....||++++.+++.+. + +..++.++.+++|
T Consensus 164 ~~w~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~ 215 (406)
T PRK15402 164 LPWRGMF---------VLFAALAALSFFGLWRAMPETAGRVGEKLSL-K------------------ELGRDYKLVLKNR 215 (406)
T ss_pred cCccHHH---------HHHHHHHHHHHHHHHHhCCCCCccccccccH-H------------------HHHHHHHHHHcCc
Confidence 5555544 665555555443 334566654322111000 0 0011345678889
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (399)
+++...+..++.......+..+.|.++.+. +|+++.+.+.......++..++. ++.+++.||.++++.+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISG-----EQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 888877776666655556666677776554 78899999988777777787887 488999999999999888887
Q ss_pred HHHHHHhHHhHH
Q 015847 363 LTIPLLTSYPYI 374 (399)
Q Consensus 363 ~~~~~~~~~~~~ 374 (399)
+..++...+...
T Consensus 290 ~~~~g~~~~~~~ 301 (406)
T PRK15402 290 PMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHHHHHH
Confidence 777666665543
No 27
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=5.3e-28 Score=236.01 Aligned_cols=189 Identities=19% Similarity=0.245 Sum_probs=164.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (399)
++.+.++.+..++....+...+|.+.+++|.+..+ .+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 169 ~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 169 FFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33455566666777777888999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCC
Q 015847 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (399)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~ 201 (399)
+++.++++++++++.++++|++.|++.+...+. .++++|++|+++|++.+++..++..+|.++++.++..+..
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~------ 316 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP------ 316 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred Cccccccc----ccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCC
Q 015847 202 NLFSSESL----FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (399)
Q Consensus 202 ~~~gw~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (399)
.+||+.. +...+|+..+++.+++.++.++..+++||+|++..
T Consensus 317 -~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~ 362 (742)
T TIGR01299 317 -HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFL 362 (742)
T ss_pred -hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 5666532 22356888888888888877778888999988643
No 28
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=1.7e-27 Score=227.76 Aligned_cols=300 Identities=13% Similarity=0.105 Sum_probs=205.8
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhH-HHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+.+....++.+++.++...+....|.+.++++.+.++.. .....+ ..++..++..++++++|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 445567788999999999999999999999876553310 111111 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHH--------HHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
++++++.+++++++|++. ++++|+++|++.|...+ ..++++|++|+++|++..++...+..+|..+|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 88999999999888777 499999999999999999999988888888888776
Q ss_pred hhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhcccc
Q 015847 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (399)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (399)
..+...... ..+..++||.++++.++++++.++....+||++++...+++.++.. .+. ..+.
T Consensus 175 ~~~~~~~~~--------~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~-------~~~---~~~~ 236 (490)
T PRK10642 175 VLISTIVGE--------ANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD-------REG---LQDG 236 (490)
T ss_pred HHHHHhcCH--------HHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc-------ccc---cccc
Confidence 554321000 0000344555557766666655555567788765321111000000 000 0001
Q ss_pred CCccccccccc-chhHH-HHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (399)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (399)
.+.+.++++++ ++.+. .....++..........++|.|+.+. +|++..+.+.......++..++. ++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-----LHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 11223344442 22222 22223334455566777888888654 67888777777777778888877 4889999
Q ss_pred HHhcchhHHHHHHHHHH
Q 015847 349 RILGPIMVARIAGVLTI 365 (399)
Q Consensus 349 ~~~~~~~~~~~~~~~~~ 365 (399)
||+|||+.+..+.+...
T Consensus 311 dr~grr~~~~~~~~~~~ 327 (490)
T PRK10642 311 DRFGRRPFVILGSVALF 327 (490)
T ss_pred HHhccHHHHHHHHHHHH
Confidence 99999998877765433
No 29
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=4.7e-27 Score=218.85 Aligned_cols=283 Identities=12% Similarity=0.136 Sum_probs=217.1
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
++..+...+..++.........+.+|.+.+++|+|+.+ .+++.+.+.++..+++++.|++.||+|||+++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455666777777777788889999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
++.+++.++++++++++.+++.|++.|++.+...+ ..+++.|++|+++|+++++..+....+|..++|.+.+.+.+.
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 157 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 99999999999999999999999999998887666 488999999999999999999999999999999998887641
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
..|||+.| ...+++.++..+..+. ++.|+.++++++ +. + + ..+.
T Consensus 158 ----~~gw~~~f---------~~~~~~~~~~~~~~~~-~~~p~~~~~~~~--~~---------------~-~---~~~~- 201 (394)
T PRK03699 158 ----SIEWYWVY---------ACIGLVYVAIFILTLF-SEFPALGKHAPK--AD---------------K-P---VAKE- 201 (394)
T ss_pred ----cccHHHHH---------HHHHHHHHHHHHHHHh-cCCccccccCcc--cc---------------C-c---cccc-
Confidence 24555444 6666555544433332 222211111000 00 0 0 0011
Q ss_pred cccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
..++.++...+..++.......+..++|.|+++. +|+++.+.+.+.+...++..+++. +.+++.||+++|+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK-----FGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRILT 275 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHHH
Confidence 1235566666666666666777888999998665 789999999999999999999985 8899999999999887
Q ss_pred HHHHHHHHHHhHHh
Q 015847 359 IAGVLTIPLLTSYP 372 (399)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (399)
....+..+.+.++.
T Consensus 276 ~~~~~~~~~~~~~~ 289 (394)
T PRK03699 276 VLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666655554443
No 30
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=4.7e-27 Score=224.23 Aligned_cols=306 Identities=15% Similarity=0.128 Sum_probs=231.0
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
.+.++.++...++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34566777788888888888999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
++.+++.++++++++++.+++.|+++|++.+...+. .+++.|.+|+++|++++++.+...++|..+||.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999988889999999999999999998887775 8899999999999999999999999999999999999998
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhh---------hhhhhhh------
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYD---------ALESASA------ 262 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~~------ 262 (399)
..|||+.| .+......+..+. ....|+.+... .+.+....... ..+....
T Consensus 160 ----~~gw~~~f---------~~~~~~~~l~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 ----YASWHWIF---------LINIPVGIIGAIATLMLMPNYTMQT-RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred ----hccHHHHH---------HHHHHHHHHHHHHHHHhCCCccccC-CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 45565554 5555444443333 33344432211 11111000000 0000000
Q ss_pred ----------------hhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHH
Q 015847 263 ----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (399)
Q Consensus 263 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 326 (399)
..++++..++....++++||+++......++..........+.|.|.+.. .|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHH
Confidence 00111111222234578999998888877777777767777888887755 788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHH
Q 015847 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (399)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (399)
+......++..++. ++.+++.||+++|+.+..+..+.++...++.+.
T Consensus 301 ~~~~~~~~~~~~~~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 301 LMMIPMVLGSMGMK-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888777 478999999999999988888777766555443
No 31
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=5.5e-27 Score=219.15 Aligned_cols=263 Identities=15% Similarity=0.191 Sum_probs=208.0
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
+.+..+..........|.+|.+.+++|.+..+ .++..+++.++..+++++.|+++||+|||++++.+.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 94 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA 94 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH
Confidence 44555666778889999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcc
Q 015847 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (399)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~ 204 (399)
.++++++++++.++++|+++|++.+...+. ..++.|++|+++|++++++......+|..+||.+++.+.+ ..
T Consensus 95 ~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~~ 167 (413)
T PRK15403 95 CAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------FV 167 (413)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hc
Confidence 999999999999999999999987765554 7889999999999999999999999999999999999987 44
Q ss_pred cccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccch
Q 015847 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (399)
Q Consensus 205 gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (399)
|||+.| ++.++..++..+. .+.+||++++++++.+ .+ ...+..++.++||.
T Consensus 168 gw~~~f---------~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~------------------~~~~~~~~ll~~~~ 219 (413)
T PRK15403 168 HWKVLF---------AIIAVMGLIAFVGLLLAMPETVKRGAVPFS-AK------------------SVLRDFRNVFRNRL 219 (413)
T ss_pred CHHHHH---------HHHHHHHHHHHHHHHHhCCCCccccCCCCC-hH------------------HHHHHHHHHHcCHH
Confidence 555544 6666666655443 4557876532111100 00 01124557789999
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
++...+..++.......+..+.|.++.+. +|+++.+.++.......+..++......++.|+.++|
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 99888887777777777777888888775 7899999999888777787777654444444544443
No 32
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=8.6e-27 Score=217.15 Aligned_cols=283 Identities=20% Similarity=0.209 Sum_probs=215.8
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
......+....+.....+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+++..+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 444555666666677778999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc
Q 015847 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (399)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~ 203 (399)
+.+++..+++.+.+++.|+++|++.+...+ ..+++.|.+|+++|+++++..+....+|..++|.+++.+.+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-------~ 153 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-------K 153 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------C
Confidence 999999999999999999999999887666 59999999999999999999999999999999999999876 3
Q ss_pred ccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccc
Q 015847 204 FSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (399)
Q Consensus 204 ~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (399)
.|||.. +.+.++..++.. +....+||++++++++++ + ..+..++.++++
T Consensus 154 ~g~~~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~ 203 (392)
T PRK10473 154 FPWQSL---------FYTMAAMGILVLLLSLFILKETRPARAPAAS--S-------------------KPRENSESLLNR 203 (392)
T ss_pred cChHHH---------HHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--c-------------------hHHHHHHHHhCH
Confidence 445444 366655555433 345566776432211100 0 001223456777
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (399)
+++...+...+.......+..+.|.+..+. +|+++.+.+.+....+++.+++.. ..+++.||+++|+.+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 204 FFLSRLVITTLSVTVILTFVNTSPVLLMEQ-----MGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 766544444433333334444555555443 788999999999999999999984 88999999999999888888
Q ss_pred HHHHHHhHHhHHHH
Q 015847 363 LTIPLLTSYPYIAM 376 (399)
Q Consensus 363 ~~~~~~~~~~~~~~ 376 (399)
+..++...+...+.
T Consensus 278 ~~~~~~~~~~~~~~ 291 (392)
T PRK10473 278 LFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666555443
No 33
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1.4e-27 Score=221.26 Aligned_cols=275 Identities=17% Similarity=0.165 Sum_probs=209.4
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
.++.............|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 34556677778888899999999999999 999999999999999999999999999999999999999999999
Q ss_pred HhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHH-HhhhhhcCCCCCCCCcccc
Q 015847 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (399)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p-~i~~~l~~~~~~~~~~~gw 206 (399)
++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++| .+++.+.+ ..+|
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~ 149 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYSW 149 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCCc
Confidence 999999999999999999998887774 99999999999999999999999999999999 56666665 3445
Q ss_pred cccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhH
Q 015847 207 ESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (399)
Q Consensus 207 ~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (399)
|.. +.+.+++.++. ++..+..||++++.+.++++++.. ++.++..++.+++....+...++.+++|.++
T Consensus 150 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 150 HWV---------FIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred hhH---------HHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHH
Confidence 444 46655555443 444555666554322111111100 0000000000011111122345677889988
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015847 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (399)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (399)
...+..++..........+.|.|..+. +|+++.+.+.......++.++++. +.+++.||..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~ 280 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQE-----KGFSKEKASWAFTLYELGGLVGTL-LAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhHH-HHHHHHHHHc
Confidence 888888887777778888899888765 788999999999999999999985 8899999863
No 34
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=8.1e-28 Score=212.06 Aligned_cols=289 Identities=14% Similarity=0.148 Sum_probs=238.5
Q ss_pred CCChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhH
Q 015847 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (399)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (399)
+...+.++...+...+.........+..+.+.+++|+|+.| .+++.++..+...+..++.|.+.||+|.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34456777777788888888888899999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccc---hHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 117 MGTASVVIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
++.++..+-++..+++. +++++++++++.|++.+.+....+.+++++|||++|.++|+.. ..++|..+...++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 99999999999888875 4559999999999999999989999999999999999999998 8888888888888777
Q ss_pred cCCCCCCCCccc---ccccccCCcchhhHHHHHHHHH-HHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccc
Q 015847 194 AQPAEKYPNLFS---SESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (399)
Q Consensus 194 ~~~~~~~~~~~g---w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
.. ..| |+.. ..+.....+ ..+..++...+.++.+...++..
T Consensus 163 ~~-------~~g~~~w~~~---------~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------------- 207 (417)
T COG2223 163 AV-------AFGFLAWRNV---------AGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------------- 207 (417)
T ss_pred HH-------HHhhHHHHHH---------HHHHHHHHHHHHHHHHHHhCCChhhhccccccc-------------------
Confidence 76 444 4433 233333333 34555666666554322211111
Q ss_pred cCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (399)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
+...+.++++++.|...+.|+.....+.++..++|.|++++ ++.++.++|.......+.+.+.+ +.+|+++|
T Consensus 208 --~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsD 279 (417)
T COG2223 208 --PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALAR-PLGGWLSD 279 (417)
T ss_pred --hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHH-hccchhhh
Confidence 02455678899999999999999999999999999999998 99999999999999999999999 59999999
Q ss_pred HhcchhHHHHHHHHHHHHHhHHhHHH
Q 015847 350 ILGPIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
|+|.+|++......++++........
T Consensus 280 R~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 280 RIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred hccchhHHHHHHHHHHHHHHHHHccc
Confidence 99999998888888877777665543
No 35
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=9.2e-27 Score=216.35 Aligned_cols=274 Identities=14% Similarity=0.106 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
.++.++.+.++..++........+.+.++++.+..+ .+++.+++.+++.+.++++|+++||+|||++++.+.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 345667778887877666777777778999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCC
Q 015847 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (399)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 200 (399)
..+++++++++.+. ++.|+++|++.+...|+ .+++.|++|+++|++++++.+....+|..+||.++|++.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 98888877776664 67899999999998886 9999999999999999999999999999999999999986
Q ss_pred CCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccc
Q 015847 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (399)
Q Consensus 201 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (399)
. .|+.++.+.+...++..+....+||+++++++++.+.... . ++. ....+.+++
T Consensus 150 --~----------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~----~~~-------~~~~~~l~~ 203 (393)
T PRK11195 150 --P----------HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIAL---L----RDF-------FHACRVLWR 203 (393)
T ss_pred --H----------HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHH---H----HHH-------HHHHHHHHh
Confidence 1 1333344444444444455566787653322111110000 0 000 011245677
Q ss_pred cchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 015847 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (399)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (399)
+|.+........+...........++.|.++. +|.++.+.|.+....+++.++++. ..+++.||.++++.+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA-----LGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHH
Confidence 77766555544444444445555666676655 788999999999999999999985 778888888887777666
Q ss_pred H
Q 015847 361 G 361 (399)
Q Consensus 361 ~ 361 (399)
.
T Consensus 278 ~ 278 (393)
T PRK11195 278 I 278 (393)
T ss_pred H
Confidence 4
No 36
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=2.4e-26 Score=216.72 Aligned_cols=284 Identities=17% Similarity=0.115 Sum_probs=195.4
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHH-HH-----HHHHHHhhhhcccccccccCCch
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVG-SS-----FMFGRALTSVFWGLVADRYGRKP 113 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~G~l~dr~Grr~ 113 (399)
++....++++.++++++...+....|.+.++++.++.+ .+... +. ..++..+++++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 44556788899999999999999999999999988876 44332 22 23334578899999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccchHH--------HHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHh
Q 015847 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI 184 (399)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (399)
+++.+.++.+++.++++++++++ .+++.|+++|++.+...+ ...+++|++|+++|++++++...+.++|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999877 468899999999888776 489999999999999999999999888888
Q ss_pred HHHHhhhhhcCCCCCC-CCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhh
Q 015847 185 IGPALGGFLAQPAEKY-PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (399)
Q Consensus 185 ~~p~i~~~l~~~~~~~-~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (399)
+++.+++.+......+ ...+|| +.++++......+........||+++..++++
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gW---------r~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~---------------- 222 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGW---------RIPFLIGCLIVPFIFLIRRSLEETEEFLARKH---------------- 222 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccch---------HHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh----------------
Confidence 8888887764311000 002344 44445543332222221122222210000000
Q ss_pred hhhccccCCcccccccccchhHHH-HHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHH
Q 015847 264 VKEEEGREATPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (399)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 342 (399)
+.+.....+...++++.+.. ....++..........+.|.|+++. +|++..+.+.......++.+++. +
T Consensus 223 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~ 292 (434)
T PRK15075 223 ----RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWL-P 292 (434)
T ss_pred ----ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-H
Confidence 00001112223344444332 2233333444555667788888765 68888888888888888888888 4
Q ss_pred HHHHHHHHhcchhHHHHHHHHH
Q 015847 343 LYPFLERILGPIMVARIAGVLT 364 (399)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~ 364 (399)
+.+++.||++||+....+..+.
T Consensus 293 ~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 293 IGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHHHHHhcchHHHHHHHHHH
Confidence 8899999999999877665443
No 37
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=1.4e-26 Score=220.53 Aligned_cols=284 Identities=14% Similarity=0.145 Sum_probs=215.0
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHH----------------------HhccCccccchhhhhhHHHHHHHHHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFGRA 96 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
++.....++++..+.+.++...+...+.+.+ |++.+..+ .|++.+++.+++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~ 90 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYGQI 90 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHHHH
Confidence 3444445666666677777666666665554 67788877 9999999999999
Q ss_pred hhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHH
Q 015847 97 LTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLS 173 (399)
Q Consensus 97 ~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~ 173 (399)
+++++.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+...+. ..+++|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999998888776543 56888999999999999998885 999999999999999999
Q ss_pred HHHHHHHHHHhHHHHhhhhhcCCCCCCCCc-ccccccccCCcchhhHHHHHHHHHHHHHHHHh-cccCCCCCCCCCCccc
Q 015847 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCD 251 (399)
Q Consensus 174 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~ 251 (399)
+...+..+|..++|.+++.+.+ . .|||..| .+.++..++..+.++. .+|+|+.+++.+++++
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f---------~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIF---------YVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeeh---------hhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence 9999999999999999999987 4 3666555 6666666655544443 4555433222111110
Q ss_pred hhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHH
Q 015847 252 VSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI 331 (399)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 331 (399)
+..++..+ .++++.+.+.++++.++++.++...+..++.......+.+++|.|+.+. +|++..+.+...+.
T Consensus 235 ---~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 235 ---KYINSSLQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV-----LRVSGKENGLLSSL 305 (465)
T ss_pred ---HHHHhhcc-cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcChHHhHHHHHH
Confidence 11111100 0011111233567889999999999998888888888889999998776 78899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcch
Q 015847 332 TGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 332 ~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
..++..++.. +.+++.||.++|
T Consensus 306 ~~~~~~i~~~-~~g~l~d~~~~~ 327 (465)
T TIGR00894 306 PYLFAWLCSI-FAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHc
Confidence 9999999884 889999987543
No 38
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=6.5e-28 Score=208.43 Aligned_cols=302 Identities=40% Similarity=0.638 Sum_probs=217.0
Q ss_pred cchhhhHHHHHHHhccCccccc--hhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 58 SSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
....++.....++|+....+.+ ...+.|.+.+.+++.+.+.++.+|.++||+|||+++.+|++..++...+.+.+.|+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F 121 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF 121 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566677766544433 66779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcc
Q 015847 136 WMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~ 215 (399)
..++++|++.|+..|-..++.++++|++++|+|+++++.+++.+++|.++||.+||++.. +. ..++++.+
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~--------f~--~~~g~~p~ 191 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ--------FS--SISGSYPF 191 (451)
T ss_pred HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh--------hH--hhhccCch
Confidence 777777999999999999999999999999999999999999999999999999999986 11 22335666
Q ss_pred hhhHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHH
Q 015847 216 FLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (399)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
..|.+...+.+.. .....+++||+.+.+++++ +.... ++..+.+++..+.........++|++.......+..+
T Consensus 192 alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~-~~~~~----~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~ 266 (451)
T KOG2615|consen 192 ALPCLLVFILAAGDVTFFPWFLPETLPLRKRND-EHSTL----QEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIF 266 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccchhhcc-cccch----hhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHH
Confidence 6666665555555 5556788999976554441 11111 1111111111111122233456777766666677777
Q ss_pred HhhhhhHHHHHHHhhcCCccc--CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHhHH
Q 015847 295 SLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSY 371 (399)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 371 (399)
....+.+..+++.+..++... +++|+++.+.|.+++..++.+.+.+..+.+.+.+..+. +-.+..+..++...++++
T Consensus 267 ~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~lll 346 (451)
T KOG2615|consen 267 GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLL 346 (451)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 777777777777777666555 66999999999999999999998886554444333332 233344444444444444
Q ss_pred hHH
Q 015847 372 PYI 374 (399)
Q Consensus 372 ~~~ 374 (399)
...
T Consensus 347 s~~ 349 (451)
T KOG2615|consen 347 SLA 349 (451)
T ss_pred hcc
Confidence 433
No 39
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=5.7e-26 Score=210.65 Aligned_cols=276 Identities=15% Similarity=0.157 Sum_probs=209.4
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.++.+....++.........+.+|.+.+++|.|..+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~ 79 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
+.+++.+.+++++|++.++++|+++|++.+...+. .+.+.|..++++|+++++..+.+.++|..+||.+++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 156 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE--- 156 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---
Confidence 99999999999999999999999999998887774 77788899999999999999999999999999999998761
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccc
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (399)
..| ...| ... ......+. ..+.+.++++. +++ ...+.++.+
T Consensus 157 ----~~~-----~~~~----~~~-~~~~~~~~-~~~~~~~~~~~-~~~-----------------------~~~~~~~~~ 197 (381)
T PRK03633 157 ----LMS-----VLPW----VTG-LVLAAILP-LLFTRILNQQA-ENH-----------------------DSTSIWPML 197 (381)
T ss_pred ----ccc-----hHHH----HHH-HHHHHHHH-HHHhcccCCCC-CCC-----------------------CCCCHHHHH
Confidence 111 1112 111 11111111 11212111110 000 001233456
Q ss_pred ccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Q 015847 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (399)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (399)
++|.++......+...........++|.|.++ .|.++.+.+.+.+...++.++++. ..+++.||+++|+.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLRV 270 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHHH
Confidence 77776654444444444445566678888765 578888999999999999999985 78999999999998887
Q ss_pred HHHHHHHHHhHH
Q 015847 360 AGVLTIPLLTSY 371 (399)
Q Consensus 360 ~~~~~~~~~~~~ 371 (399)
+..+..++...+
T Consensus 271 ~~~~~~~~~~~~ 282 (381)
T PRK03633 271 QVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHH
Confidence 777666655443
No 40
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=2.2e-26 Score=213.32 Aligned_cols=266 Identities=21% Similarity=0.285 Sum_probs=207.1
Q ss_pred ccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccch
Q 015847 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (399)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (399)
+......|.+|.+.+++|.++.+ .++..+++.++..+++++.|+++||+|||+++..+.++.+++.+.+.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 34456779999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCC
Q 015847 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (399)
Q Consensus 135 ~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~ 213 (399)
++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ ..|||
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~------ 145 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-------WFSWH------ 145 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcChH------
Confidence 999999999999998887764 8999999999999999999999999999999999999987 34444
Q ss_pred cchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHH
Q 015847 214 PYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (399)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (399)
..+.+.++..++.. +..+.+||+++++++++.+.+ +..++.++.+++|+++...+..+
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 146 ---AIFWVLALAAILAAALVFFFIPETLPKERRQPFHLR------------------TTIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChH------------------HHHHHHHHHHcChHHHHHHHHHH
Confidence 44466665555543 344566765432211110000 00113345677887776666555
Q ss_pred HHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 015847 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (399)
+.......+..+.|.+..+. +|+++.+.+.+.....++.++++. ..+++.||+++|+.+..+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIEL-----NGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 54444445555555555444 688999999999999999999984 889999999999988877765443
No 41
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=4.1e-26 Score=215.07 Aligned_cols=296 Identities=15% Similarity=0.132 Sum_probs=199.4
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHH-HHHHh--ccCccccchhhh-hhHHHHHHHHHHHhhhhcccccccccCCchhh
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (399)
++......+..+++.++........|. +.+++ +.++.+ ... .....++..++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 345556677888899988888877774 44555 555432 111 11122455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchHH--------HHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHH
Q 015847 116 IMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (399)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (399)
..+.++++++++++++++++. .++++|+++|++.|...+ ...++.|++|+++|++..+....+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999888777 48999999999999999999999999999998
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhh
Q 015847 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (399)
Q Consensus 187 p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (399)
+.+...+...... + .+..++||.++++.++..++........||++++.+++++.++
T Consensus 178 ~~~~~~l~~~~~~------~--~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~--------------- 234 (438)
T PRK09952 178 TGLVSLISMMTTD------E--QFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA--------------- 234 (438)
T ss_pred HHHHHHHHHhCCH------H--HhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc---------------
Confidence 8877766531110 0 0113456666677766655544444456666532211100000
Q ss_pred ccccCCcccccccccchhHHHHH-HHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015847 267 EEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (399)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 345 (399)
.++.....+.++++|+.+.... ..++..........+.|.|..+. +|++...........++...++. ++.+
T Consensus 235 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~g~s~~~~~~~~~~~g~~~~i~~-~~~g 307 (438)
T PRK09952 235 -AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----LGLPRELFLNIGLLVGGLSCLTI-PCFA 307 (438)
T ss_pred -ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 0000001123456666655433 33344445555667788777655 67777665555556666667776 4789
Q ss_pred HHHHHhcchhHHHHHHHHHHHHH
Q 015847 346 FLERILGPIMVARIAGVLTIPLL 368 (399)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~ 368 (399)
++.||++||+.+..+.++..++.
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~ 330 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSA 330 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHH
Confidence 99999999998887766554443
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=4.1e-26 Score=218.35 Aligned_cols=312 Identities=15% Similarity=0.048 Sum_probs=206.2
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHh--------ccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr 111 (399)
.+......++.+..+++...+.+..|.+.+++ +.+..+ .+++.+++.++..++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Gr 84 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGR 84 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34445666778888889999999999888887 666777 9999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHhcc------------chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHH
Q 015847 112 KPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTA 178 (399)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~ 178 (399)
|++++++.++.+++.+.++++ +.++.+++.|+++|++.|...+ ..++++|++|+++|++++++.+.+
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 999999999998888877653 2356788999999999888777 499999999999999999999999
Q ss_pred HHHHHhHHHHhhhhhcCCCCC-CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchh--hh
Q 015847 179 WGIGLIIGPALGGFLAQPAEK-YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YD 255 (399)
Q Consensus 179 ~~~g~~~~p~i~~~l~~~~~~-~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~ 255 (399)
..+|..+++.+++.+...... ... .++||.++.+.++..++..+..+++||++++...+++.++.. .+
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~~~~~---------~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 235 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDASWLN---------TDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILR 235 (479)
T ss_pred HHHHHHHHHHHHHHHhccCcccccc---------cCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHH
Confidence 999999999888776531100 001 334555557777777666666777899875422111111100 00
Q ss_pred hhh---hhhh---hhhhccccCCcccccccccchhHHHHHHHHHHHh----hhhhHHHHHHHhhcCCcccCccccchhhH
Q 015847 256 ALE---SASA---EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL----HDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (399)
Q Consensus 256 ~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (399)
+.. +..+ +..+....+....+..+.- .............+ .......+.|.+..+ .|++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~------~g~~~~~~ 308 (479)
T PRK10077 236 KIMGNTLATQALQEIKHSLDHGRKTGGKLLMF-GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT------LGASTDIA 308 (479)
T ss_pred HHcCChhHHHHHHHHHHHHHHhhhhhhhhcch-hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH------cCCCCchH
Confidence 000 0000 0000000000000111110 00111111111111 111122233444333 67777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHH
Q 015847 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (399)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (399)
+......++..+++. ++.+++.||++||+.+..+.++.+++.+.+...
T Consensus 309 ~~~~~~~~~~~~i~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~ 356 (479)
T PRK10077 309 LLQTIIVGVINLTFT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTA 356 (479)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHH
Confidence 777777788888888 488999999999999999988888877766543
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=6.6e-26 Score=217.81 Aligned_cols=305 Identities=15% Similarity=0.186 Sum_probs=213.7
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
.+++.+..+++..++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||+.+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3445666788888888899999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
+.++.+++.++++++++++.+++.|++.|++.+...+ ..+++.|.+|+++|++++++...+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP- 169 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999999998777666 48999999999999999999999999999999999999987
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccc--hhhhhhhhhhhhhhhc-------
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASAEVKEE------- 267 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 267 (399)
..|||+.| .+..+..++.++....+||++++.++++++.+ ...+.......+....
T Consensus 170 ------~~~w~~~f---------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 170 ------VWGWRALF---------FIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred ------cCCHHHHH---------HHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 45565544 54444333333334455665432211111100 0000000000000000
Q ss_pred -------cccCCccc-------------------ccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccc
Q 015847 268 -------EGREATPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (399)
Q Consensus 268 -------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (399)
.......+ ....+.+.........+...........++|.|+++. +|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~ 309 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYD 309 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCC
Confidence 00000000 0000011111111111222222223456788888654 7899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 322 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
+.+++.+.+...++.++++. +.+++.||+++|+.+..+..+..+..+.
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 357 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCC-VGGFLGDWLGTRKAYVCSLLISQLLIIP 357 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 8899999999999887776665554433
No 44
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=209.84 Aligned_cols=273 Identities=17% Similarity=0.189 Sum_probs=209.7
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 123 (399)
........+..+..+...|.+|.+.+++|.++.+ .++..+++.++..++++++|+++||+|||+++..+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 82 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFA 82 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHH
Confidence 3344445556667778889999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCC
Q 015847 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (399)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~ 202 (399)
++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|++..+.......+|..++|.+++++.+
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------- 155 (401)
T PRK11043 83 LGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------- 155 (401)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 99999999999999999999999987776664 8889999999999999999988999999999999999987
Q ss_pred cccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccc
Q 015847 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (399)
Q Consensus 203 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (399)
..|||.. +.+.++..++..+..+.++|++++++++ + .+.+.++.+++|
T Consensus 156 ~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------------~~~~~~~~~~~~ 203 (401)
T PRK11043 156 HFGWQAI---------FATLFAITLLLILPTLRLKPSKKARKQS---Q--------------------DALTFKQLLKSK 203 (401)
T ss_pred cCChHHH---------HHHHHHHHHHHHHHHHHcCCCCCccccc---h--------------------HHHHHHHHHcCh
Confidence 4455444 4666666665555555555543221100 0 011345667777
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (399)
+++...+...+.......+..+.|.+.++ +|+++.+.|.......++..+++. ..+++.||+++++.......
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~~ 276 (401)
T PRK11043 204 TYLGNVLIFAACSAAFFAWLTGSPFILEQ------MGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLLV 276 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHHH
Confidence 77765555555555555666677777654 688999999888888888888874 78899999998887655554
Q ss_pred HHHHHH
Q 015847 363 LTIPLL 368 (399)
Q Consensus 363 ~~~~~~ 368 (399)
..+++.
T Consensus 277 ~~~~~~ 282 (401)
T PRK11043 277 LFAVSV 282 (401)
T ss_pred HHHHHH
Confidence 444443
No 45
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=1.6e-25 Score=208.68 Aligned_cols=304 Identities=13% Similarity=0.064 Sum_probs=221.9
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
.+..++...+..++..+...+.+|.+++++|.+..+ .|++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 345666777778888888899999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc---cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 122 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.+++.+++.. .++++.+++.|++.|++.|...+. .+++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999887644 468999999999999999988774 889999999999999999999999999999999999886421
Q ss_pred CCC-CCccccccc---------ccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhc
Q 015847 198 EKY-PNLFSSESL---------FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (399)
Q Consensus 198 ~~~-~~~~gw~~~---------f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (399)
... ....-++.. -...+|+.++.+.+++.++..+...+.++++.++ ++++ ++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-~~~~-~~---------------- 219 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-SDAK-QI---------------- 219 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cccc-cc----------------
Confidence 000 000000000 0012466666777776655444433332221111 0000 00
Q ss_pred cccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (399)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l 347 (399)
+.....++.+|+|.++...+..+++...+.+..++++.|..+.. .+.+....+...+.......+++ ++++++
T Consensus 220 --~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~----~~~~~~~a~~~~~~~~~~~~vGR-~~~~~l 292 (410)
T TIGR00885 220 --SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI----PGMTAGFAANYNIGAMVIFFISR-FIGTWL 292 (410)
T ss_pred --cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 00112346778888888888888888888788888888876421 23444445555555566777888 489999
Q ss_pred HHHhcchhHHHHHHHHHHHHHhHHhHHHH
Q 015847 348 ERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
.||+++|+.+.+......+..++..+.+.
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~~ 321 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAGG 321 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999988888877777776665433
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=4.7e-26 Score=212.49 Aligned_cols=293 Identities=19% Similarity=0.268 Sum_probs=206.1
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
++.+.......+..+.......+..|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 34444555566666777777788899999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
++..++.++..++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++...+..+|..++|.+++++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 166 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP--- 166 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999998887774 9999999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHH-HHHHHHHHhcccCCCCCCCCCCcc-chhhhhhhhhhh-h---hhhcc-c--
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFA-FGVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASA-E---VKEEE-G-- 269 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~-~-- 269 (399)
..||+..| .+.++.. +...+...++||+++...+++++. ++..++.+.... + ..+++ .
T Consensus 167 ----~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T TIGR00895 167 ----VFGWRSLF---------YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQ 233 (398)
T ss_pred ----cccceeeh---------hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccccccc
Confidence 55666555 5553333 334444566777654322211110 000000000000 0 00000 0
Q ss_pred cCCcc-ccccccc---chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 REATP-KKSLLKN---WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (399)
Q Consensus 270 ~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 345 (399)
+..+. .+..+++ +..+......++..........++|.+..+ +|+++.+.+.......++.+++.. +.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 306 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE------LGFSLSLAATGGALFNFGGVIGSI-IFG 306 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 00111 1112222 223333344444444555555666744433 688999999999999999999984 889
Q ss_pred HHHHHhcchhHHHHHH
Q 015847 346 FLERILGPIMVARIAG 361 (399)
Q Consensus 346 ~l~~~~~~~~~~~~~~ 361 (399)
++.||+++++......
T Consensus 307 ~l~~~~~~~~~~~~~~ 322 (398)
T TIGR00895 307 WLADRLGPRVTALLLL 322 (398)
T ss_pred HHHhhcchHHHHHHHH
Confidence 9999999885444333
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=4.5e-26 Score=217.83 Aligned_cols=298 Identities=20% Similarity=0.153 Sum_probs=204.6
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccC--------ccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
..+..++..++.....+..+.+..+++.+ ..+ .+++.+++.++..+++++.|+++||+|||+++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33445566677778888888888888777 566 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc---chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh---
Q 015847 118 GTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--- 190 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~--- 190 (399)
+.++..++.+++.+. .+++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888543 45668999999999998887775 99999999999999999999999999999999998
Q ss_pred hhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccch--hhhhh--------hhh
Q 015847 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV--SYDAL--------ESA 260 (399)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~--------~~~ 260 (399)
+...+ ..+|| ..+.+.++..++.++..+++||+++....+++..+. ...+. +..
T Consensus 187 ~~~~~-------~~~w~---------~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (481)
T TIGR00879 187 VSLNN-------TLGWR---------IPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL 250 (481)
T ss_pred hcCCC-------CccHH---------HHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence 55544 34444 444666666666666667788876421111110000 00000 000
Q ss_pred h------hhhhhccccCCcccccccc------cchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHH
Q 015847 261 S------AEVKEEEGREATPKKSLLK------NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 328 (399)
Q Consensus 261 ~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 328 (399)
. .....+.+.....+.+.++ .+.++...+..+...........+.|.+..+ .|++..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 324 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN------AGVSTDHAFLV 324 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH------cCCCchHHHHH
Confidence 0 0000000000011112222 2222333333333333333444555655544 68888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
.....++.+++.. +.+++.||+++|+.+..+.++.+++++.+.
T Consensus 325 ~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 325 SIIVGAVNFAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888888885 889999999999998888777777766655
No 48
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=5e-27 Score=228.54 Aligned_cols=311 Identities=16% Similarity=0.136 Sum_probs=231.1
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
...+..+......+...+.++.++++|+++..+ .|++.+.+.+++.++.++.|+++||+|||+.+.++.+++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 344456666666778888899999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccc---------------------------------------------------hHHHHHHHHHHHhhhccchh
Q 015847 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (399)
Q Consensus 125 ~~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~ 153 (399)
+++++++.+ .+..++++|+++|+|.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999887753 24567899999999998888
Q ss_pred hH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCC---------cccccccccCCcchhhHHHHH
Q 015847 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN---------LFSSESLFGKFPYFLPCLCIS 223 (399)
Q Consensus 154 ~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~---------~~gw~~~f~~~~~~~~~~~~~ 223 (399)
+. .+++.|++|+++|++++++++.+..+|.++|+++++++.+...+|+. -.+||| ..+||..|++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW---iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW---IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH---HHHHHHHHHHHH
Confidence 85 99999999999999999999999999999999999999863222210 011222 123788888888
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhh-h---hccccCCcccccccccchhHHHHHHHHHHHhhhh
Q 015847 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (399)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
++.++..+.++++|++.++...+.+.+....+..++..++. . +...+.+...+++++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 88777666667777654432111100000000000000000 0 0001122345678999999999999999999999
Q ss_pred hHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHhH
Q 015847 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS-LLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 370 (399)
++..++|.|+++. +|+++.+++.+.+...+. .+++. ++++++.||++ .++.+..+.++..++++.
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 9999999999877 899999999998887764 45555 68999999987 456666666666555443
No 49
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=2e-25 Score=208.52 Aligned_cols=277 Identities=20% Similarity=0.143 Sum_probs=196.8
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
++.+..+.+..++..++..+..+.+|. +.+++|.|+.+ .|++.+++.++..+++++.|+++||+||||+++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG 87 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH
Confidence 456777888888888888999999996 56889999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc--------chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHh
Q 015847 119 TASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 119 ~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
.++.+++.+.+.++ .+++.+++.|+++|++.+...+. .+++.|++|+++|++++++......+|..+||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 167 (399)
T PRK05122 88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPL 167 (399)
T ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHH
Confidence 98887776655442 25678899999999998887775 8889999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccc
Q 015847 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (399)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
++.+.+ ..|| +..+.+..+..++..+.....|++++ ++++ +.
T Consensus 168 ~~~l~~-------~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------ 209 (399)
T PRK05122 168 GVLLYH-------WGGL---------AGLGLLIMLLALLGLLLARPRPAVPP---VKGE-RL------------------ 209 (399)
T ss_pred HHHHHH-------cccH---------HHHHHHHHHHHHHHHHHHhcCCCCCC---CCcc-ch------------------
Confidence 999987 3444 43335544444333322222222111 1000 00
Q ss_pred cCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (399)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
+.++.++ +.+.......+..........+++.|..+ .|+ .+.+......+++.++++. ..+++.|
T Consensus 210 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~-~~g~l~~ 274 (399)
T PRK05122 210 ----PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGARL-LFGNLIN 274 (399)
T ss_pred ----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111111 11222222223333344455566776644 343 2345666777888888874 7899999
Q ss_pred HhcchhHHHHHHHHHHHHHhHHhHHH
Q 015847 350 ILGPIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
|+++++.+..+..+.+++...+...+
T Consensus 275 r~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 275 RLGGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988888777777766655443
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=4e-25 Score=206.37 Aligned_cols=273 Identities=14% Similarity=0.178 Sum_probs=202.9
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.+....++.++.........+.++.+.+++|.++.+ .++..+.+.++..+++++.|+++||+||||++..+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~ 86 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLL 86 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4555666777777777777777888888999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---hc-cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHH-hHHHHhhhhhc
Q 015847 121 SVVIFNTLF---GL-SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLA 194 (399)
Q Consensus 121 ~~~~~~~~~---~~-~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~p~i~~~l~ 194 (399)
+.+++.+++ +. .++++.+++.|++.|++.+...+ ..+.+.|.+|+++|++++|+.+.+.++|. .++|.+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 988887654 23 35788889999999998777665 47888899999999999999999999997 68999999988
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (399)
+ .+||+..+ |+..+.. .+..++..+..++.+++++++ + +++. ++..+.
T Consensus 167 ~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~-~~~~---------------~~~~~~ 214 (402)
T TIGR00897 167 P-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQ-T-REKF---------------SELGKA 214 (402)
T ss_pred c-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCccccc-C-Ccch---------------hhHHHH
Confidence 7 45554332 2222111 111222233334432111110 0 0000 000113
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
.+.++++|+++...+..++.........++.|.|..+ +|+++.+.+.+.+...++..++.. ..+++.||++||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~ 287 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGDKLGWM 287 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcch
Confidence 4467889999887777777777777788889988754 688999999988888999999985 889999999988
Q ss_pred hHHH
Q 015847 355 MVAR 358 (399)
Q Consensus 355 ~~~~ 358 (399)
+...
T Consensus 288 ~~~~ 291 (402)
T TIGR00897 288 NTVR 291 (402)
T ss_pred hHHH
Confidence 7653
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=3.1e-25 Score=205.51 Aligned_cols=274 Identities=16% Similarity=0.162 Sum_probs=199.4
Q ss_pred HHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH-HHHHHHHH
Q 015847 48 IIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (399)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~ 125 (399)
+..++..+......|.+|. +.+++|.+..+ .|++.+++.+...+.+++.|+++||+||||.++. +.....++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 3466677777888899985 56789999999 9999999999999999999999999999887654 55666677
Q ss_pred HHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHH--HHHHHHHHHHHHhHHHHhhhhhcCCCCCCCC
Q 015847 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (399)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~ 202 (399)
.++++++++++.+++.|++.|.+.+...|. .++..|+.|+++|++. .+......++|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 788888999999999999988876666675 7888898887777654 577788889999999999999987
Q ss_pred cccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccccc
Q 015847 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (399)
Q Consensus 203 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (399)
.+|| +..+.+.++..++..+. .+.+||.+++.+++++ ..+.++.+++
T Consensus 151 ~~~~---------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 GFGF---------TVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred hccc---------HHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 3444 44447776665554443 4557876543211100 0012234566
Q ss_pred chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015847 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (399)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (399)
++++......++.......+...+|.|+.+. +|.++.+.+.+.........++. ++.+++.||+++|+.+..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHH
Confidence 6666555554444444444555677776554 78889999988877777777776 48899999999999887776
Q ss_pred HHHHHHHhHHh
Q 015847 362 VLTIPLLTSYP 372 (399)
Q Consensus 362 ~~~~~~~~~~~ 372 (399)
+...+....+.
T Consensus 273 ~~~~~~~~~~~ 283 (375)
T TIGR00899 273 LAGVAFYTGLA 283 (375)
T ss_pred HHHHHHHHHHH
Confidence 66555544443
No 52
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.8e-27 Score=209.43 Aligned_cols=280 Identities=18% Similarity=0.154 Sum_probs=214.5
Q ss_pred CCCChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhh
Q 015847 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (399)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (399)
...+++.+..+++..+++..+.+.+....+.+++.+|++++. .|++++.+.+.+.+.+|+.|+++||+.||+++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 345567777889999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.+|.+++.++.++++++..+|++.++|.+.|+|.+.+.|. +++++|.+|.++|++++++++.+..+|..+|.+++..+.
T Consensus 102 ~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 9999999999999999999999999999999999999885 999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccc-ccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCC
Q 015847 195 QPAEKYPNLFS-SESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (399)
Q Consensus 195 ~~~~~~~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (399)
+ ..+ ||+.| ...+++.++..+ ..++.+|+++...++.+..... ........
T Consensus 182 ~-------~~~~Wr~af---------~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~ 234 (493)
T KOG1330|consen 182 S-------LTFWWRWAF---------RGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVW 234 (493)
T ss_pred c-------CccceEEEE---------EeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchH
Confidence 7 333 66666 556666666444 4555666654322221111100 00111222
Q ss_pred cccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015847 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (399)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (399)
++.+.+.+++.+....+.+....+....+.-+.|.+....+.. .|.+.++.-++..+...++.++.+ +++.++||+
T Consensus 235 kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~~ 310 (493)
T KOG1330|consen 235 KDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVL-FGGIISDKL 310 (493)
T ss_pred HHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhhe-ehHHHHHHH
Confidence 3444555666666666666666666666666666655443333 344555555666666777777764 788888874
No 53
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=4.3e-25 Score=208.92 Aligned_cols=282 Identities=14% Similarity=0.102 Sum_probs=198.1
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
+|..+....+................|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 90 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAG 90 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhh
Confidence 344444444444444444455677889999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHH-HHHHHhhhccch-hhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLL-GPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
.++..+++++++++++++.+++ .|++.|++.+.. .+..+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~- 168 (455)
T TIGR00892 91 GLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE- 168 (455)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-
Confidence 9999999999999999998865 468999988765 445788889885 789999999999999999999999999987
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhc-ccCCCCCCCCCCccchh-hhhhhhhhhhhhhccccCCcc
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVS-YDALESASAEVKEEEGREATP 274 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 274 (399)
.+|||+.| ++.+++.++..+..+++ ++.+.+...+.++.+.. .+...+..+.....++..+..
T Consensus 169 ------~~gwr~~f---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
T TIGR00892 169 ------SFGWRGSF---------LILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFL 233 (455)
T ss_pred ------HhChHHHH---------HHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhc
Confidence 45555554 66666655544433333 32211110000000000 000000000000000001111
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (399)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
..+.+++|+++......++..........+++.|..+ .|+++.+++.+.+..+++.++++. ..+++.||
T Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~ 302 (455)
T TIGR00892 234 DFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFARP-SCGLIAGL 302 (455)
T ss_pred chHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence 1257788998888777777777766777788888754 688999999999999999999884 78888886
No 54
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=1.1e-25 Score=213.12 Aligned_cols=274 Identities=11% Similarity=0.024 Sum_probs=194.7
Q ss_pred HHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHH
Q 015847 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (399)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 127 (399)
+................|++.++ |.+..+ .++..+++.++..+++++.|+++||+|||++++++.++.+++.+
T Consensus 36 ~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~ 108 (452)
T PRK11273 36 FGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML 108 (452)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHH
Confidence 34444444444566777888887 999999 99999999999999999999999999999999999999999988
Q ss_pred HHhcc----chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHh-HHHHhhhhhcCCCCCCC
Q 015847 128 LFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKYP 201 (399)
Q Consensus 128 ~~~~~----~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~p~i~~~l~~~~~~~~ 201 (399)
++++. .+++.+++.|++.|++.+...+ ....+.|++|+++|++++++.+.+.++|.. .+|+++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~------ 182 (452)
T PRK11273 109 FMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW------ 182 (452)
T ss_pred HHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH------
Confidence 88775 3788889999999998887766 477889999999999999999999999875 45555434432
Q ss_pred CcccccccccCCcchhhHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc-ccccc
Q 015847 202 NLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLL 279 (399)
Q Consensus 202 ~~~gw~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 279 (399)
..|||+. +++.+++.++ .++..+++||+++....+++++.+ ++.++..++.++++.+.... ....+
T Consensus 183 -~~gw~~~---------f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T PRK11273 183 -FNDWHAA---------LYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDYPDDYNEKHEQELTAKQIFMQYVL 250 (452)
T ss_pred -hccHHHH---------HHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hccccccccccCCCccHHHHHHHHHH
Confidence 2345444 4666555544 345566678766532111110000 00000000000000000001 12367
Q ss_pred ccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015847 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (399)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (399)
|++.+|...+..++..........++|.|+++. .|++..+++.......++.+++. ++.+++.||++
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~ 317 (452)
T PRK11273 251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVF 317 (452)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHc
Confidence 889998888887777777777888999998876 68888889988888888888888 48999999983
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=3.8e-25 Score=206.25 Aligned_cols=265 Identities=16% Similarity=0.259 Sum_probs=202.9
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
+++.+.......++..+......|.+|.+.+++|.++.+ .++..+++.++..+++++.|+++||+|||+++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~ 79 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 455666666666666777778889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.++..++.+.+.++++++.+++.|++.|++.+...+. ..+..|.+++++|+++.+..+.+..++..++|.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-- 157 (394)
T PRK11652 80 MSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-- 157 (394)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999988876665 7888999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccc
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (399)
..|||.. +.+.++..++. .+..++.||+++.+++++ + .....+
T Consensus 158 -----~~g~~~~---------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~~ 201 (394)
T PRK11652 158 -----LFGWRAC---------YLFLLLLGAGVTFSMARWMPETRPADARRT---R-------------------VLASYR 201 (394)
T ss_pred -----ccChHHH---------HHHHHHHHHHHHHHHHHhCCccCccccchh---H-------------------HHHHHH
Confidence 4455444 46655544443 334456677543221110 0 011334
Q ss_pred cccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
+.+++|.++...+..+........+....+.+..+. +|+++.+.+.+.....++..+++ .+.+++.||.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~ 272 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV-----LGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFST 272 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 566777776655554444444444455555565554 78889999998888888887777 477888888873
No 56
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=1.2e-25 Score=215.60 Aligned_cols=319 Identities=14% Similarity=0.117 Sum_probs=205.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHh-----ccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhh
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDF-----QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (399)
+.+..+.++.+.++++....+...|.+.+++ +.+..+ .+++.+...++..+++++.|+++||+|||+++
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 4444667788888888888888888776653 122333 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccch------HHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHH
Q 015847 116 IMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (399)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 188 (399)
.++.++..++.++++++++ ++.+++.|++.|++.|...+ ...+++|++|+++|++++++.+....+|..+++.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888765 78899999999999888777 5999999999999999999999999999999999
Q ss_pred hhhhhcCCCCC-CCCccc-----ccc--cccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcc---chhhhhh
Q 015847 189 LGGFLAQPAEK-YPNLFS-----SES--LFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSC---DVSYDAL 257 (399)
Q Consensus 189 i~~~l~~~~~~-~~~~~g-----w~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~ 257 (399)
++..+...... +....+ ++. .. .++||.++.+.++.+++..+..+++||+|++...+++++ .+...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAV-DYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchh-cccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 98776431100 000000 000 11 356888888888888877777888999998643222211 1100110
Q ss_pred hh-----hhhhhh---hccccCCccccccccc---chhHHHH----HHHHHHHhhhhhHHHHHHHhhcCCcccCccccch
Q 015847 258 ES-----ASAEVK---EEEGREATPKKSLLKN---WPLMSSI----IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (399)
Q Consensus 258 ~~-----~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 322 (399)
.. ..++.+ ++++.....+++++++ ++.+... ...+.......+...+.|.++.+ .|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~------~G~~~ 322 (502)
T TIGR00887 249 LQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA------IGYSP 322 (502)
T ss_pred hccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH------HcCCC
Confidence 00 000000 0000011234455542 2221111 11222222223333344555433 45443
Q ss_pred hhHH-----------H-HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhH
Q 015847 323 QMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 323 ~~~g-----------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
...+ . ......++.+++. ++.+++.||+|||+.+..+..+..+++..+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 323 PAATNNAYEELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 3211 1 1223334455555 57899999999999988887777766655543
No 57
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=5.6e-25 Score=204.96 Aligned_cols=276 Identities=16% Similarity=0.175 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+.++.+.+..++.....+...|.+|. +.+++|.|..+ .|++.+++.++..++++++|+++||+||||++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 45556666777777778888899985 56899999999 999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH---hc-----cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 120 ASVVIFNTLF---GL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 120 ~~~~~~~~~~---~~-----~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
+...++.+.+ +. .++++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+.+...|..++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 8776654432 21 357889999999999998887775 88999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhcccc
Q 015847 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (399)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (399)
+++.+ ..| |+..+.+..+..++........||.+++ ++++ +
T Consensus 169 ~~l~~-------~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------- 209 (392)
T PRK12382 169 LLLHS-------HFG---------FAALALTTMVLPLLAWAFNGTVRKVPAH---AGER-P------------------- 209 (392)
T ss_pred HHHHh-------ccC---------hHHHHHHHHHHHHHHHHHHHhccCCCCC---cccC-c-------------------
Confidence 99987 334 4433344333333222222222322111 0000 0
Q ss_pred CCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (399)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
+.++..+ .++...+..++..........+.+.|+.+ .+++. .+......+++.++++ +..+++.||
T Consensus 210 ---~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r 275 (392)
T PRK12382 210 ---SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWAM--AGFTLTAFGGAFVLMR-VLFGWMPDR 275 (392)
T ss_pred ---hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCch--hHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 0011111 11111112222233333455566766654 34433 4555666777777777 478899999
Q ss_pred hcchhHHHHHHHHHHHHHhHHhHHH
Q 015847 351 LGPIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
+++|+.+..+..+..++...+...+
T Consensus 276 ~g~~~~~~~~~~~~~~~~~~~~~~~ 300 (392)
T PRK12382 276 FGGVKVAIVSLLVETVGLLLLWLAP 300 (392)
T ss_pred cCCCeehHHHHHHHHHHHHHHHHcc
Confidence 9999998888887777766655443
No 58
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=7.7e-25 Score=205.21 Aligned_cols=293 Identities=22% Similarity=0.365 Sum_probs=204.6
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.....++..++.........+.+|.+.+++|.+..+. ...+.|++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34556677788888888889999999999999887541 01124889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 200 (399)
+.+++.+++.+.++++.+++.|++.|++.+...+..+++.|.+|+++|++++++......+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999988889999999999999999766544457888999999999999999999999999999999999987
Q ss_pred CCcccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccc
Q 015847 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (399)
Q Consensus 201 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (399)
..+||..| .+.++..++..+ ..+.+||++++.+++++ .+ .++..+.+
T Consensus 168 --~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~ 215 (408)
T PRK09874 168 --SYGLRPVF---------FITASVLFLCFLVTLFCIRENFQPVSKKEM-LH--------------------MREVVTSL 215 (408)
T ss_pred --HhCHHHHH---------HHHHHHHHHHHHHHHHHhccCcccccchhh-hH--------------------HHHHHHhC
Confidence 44555444 666655554433 34555654322111100 00 00112334
Q ss_pred ccchhHHHH-HHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 280 KNWPLMSSI-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
++++++... ...+...........+++.|..+.... .+......+.+....+++..++. +..+++.||+++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGN--VSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHH
Confidence 566654432 223333334444555666665542100 01111234556666677777777 47889999999999988
Q ss_pred HHHHHHHHHHhHHhHH
Q 015847 359 IAGVLTIPLLTSYPYI 374 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~~ 374 (399)
.+.....++.+...+.
T Consensus 293 ~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 293 TALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877766666554443
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=8.2e-25 Score=201.06 Aligned_cols=267 Identities=15% Similarity=0.088 Sum_probs=202.5
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
......+.+|.+.+++|.+..+ .++..+.+.++..+++++.|+++||+|||+++.++.++..++.+.+ ..++.
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~ 87 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGT 87 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccH
Confidence 4466789999999999999999 9999999999999999999999999999999999998888888777 77889
Q ss_pred HHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
+.+++.|++.|++.+...+. ..++.|++| ++|++++++.+....+|..+++.+++.+.+ ..+ .+
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~~ 152 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------GH 152 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------hh
Confidence 99999999999998876664 778888886 689999999999999999999999998876 211 11
Q ss_pred chhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHH
Q 015847 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
|+..+...++..++.. ..++|+.+++++++++ ......++.+|+|.++...+..++.
T Consensus 153 w~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (355)
T TIGR00896 153 WQQALAWWALPALLAL--LAWIPQVRRRVAANQT---------------------TTRLTPVRIWRSPLAWQVTVFFGLQ 209 (355)
T ss_pred HHHHHHHHHHHHHHHH--HHHhhhhccccCCCCC---------------------CCCCCCchhhcCHhHHHHHHHHHHH
Confidence 3333344444333222 2334544322111000 0112345677888888776666666
Q ss_pred HhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHHhHHhH
Q 015847 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
.........++|.|+++ .|+++.+.+.+.+...++.++++. ..+++.||+ ++|+.+..+..+.+++...+.+
T Consensus 210 ~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 210 SGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASAL-LIPALARRVKDQRGIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred HHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 66677777888988865 688999999999999999999995 889999999 4566666666666666655544
Q ss_pred H
Q 015847 374 I 374 (399)
Q Consensus 374 ~ 374 (399)
.
T Consensus 283 ~ 283 (355)
T TIGR00896 283 A 283 (355)
T ss_pred h
Confidence 3
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.3e-24 Score=202.38 Aligned_cols=281 Identities=16% Similarity=0.175 Sum_probs=206.5
Q ss_pred HHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (399)
..+....++.........|+++ ++.+++|.+..+ .|+..+...+...+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 3344566666666677788887 456889999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCC
Q 015847 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (399)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~ 201 (399)
+++.+.+.++++++.+++.|+++|++.+...+. .+++.|.+|+++|++++++.+...++|..+||.+++++.+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~------ 160 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ------ 160 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998877775 8999999999999999999999999999999999999973
Q ss_pred CcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccc
Q 015847 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (399)
Q Consensus 202 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (399)
.|||+.| .+.++..++.. +..+..||.++. +.+ ++ .....++.++
T Consensus 161 --~g~~~~f---------~~~~~~~~~~~i~~~~~~~~~~~~---~~~--~~------------------~~~~~~~~~~ 206 (400)
T PRK11646 161 --YDFRLVC---------ATGAVLFVLAAAFNAWLLPAYKLS---TVR--TP------------------VREGMTRVLR 206 (400)
T ss_pred --hhHHHHH---------HHHHHHHHHHHHHHHHhCCccccc---ccc--hh------------------hHHHHHHHHc
Confidence 3444443 55555544433 333445542211 000 00 0113445677
Q ss_pred cchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 015847 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (399)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (399)
+|+++...+..+...........++|.|.++. +.++.+.+.+++..++..........++.+||.+.++.+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 280 (400)
T PRK11646 207 DKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI------AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAG 280 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh------cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 88877655554444433334455677777653 346778888888877777666555667777777766666677
Q ss_pred HHHHHHHHhHHhHHHH
Q 015847 361 GVLTIPLLTSYPYIAM 376 (399)
Q Consensus 361 ~~~~~~~~~~~~~~~~ 376 (399)
..+.+++...+...+.
T Consensus 281 ~~~~~~~~~~l~~~~~ 296 (400)
T PRK11646 281 LLIMSLSMFPIGMVSN 296 (400)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 7777766666554443
No 61
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=5.3e-25 Score=204.71 Aligned_cols=284 Identities=14% Similarity=0.171 Sum_probs=213.8
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+.++.+....++...+.+...+.+|. +.+++|.+..+ .|+..+.+.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 34556667777788888888888874 55789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
++..++.+..+++++++.++++|.+.|.+.+...+. .++..|.+|+++|++++++.+...++|..++|.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999998998888876666664 8899999999999999999999999999999999998864
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (399)
.||+..| ...++..++.++ ..+.+||+++++++++ ++ ..+.++
T Consensus 158 -----~g~~~~f---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~ 201 (395)
T PRK10054 158 -----QSINLPF---------WLAAICSAFPLVFIQIWVQRSEKAIATET---GS-------------------VWSPSV 201 (395)
T ss_pred -----hccCcHH---------HHHHHHHHHHHHHHHHHHhccccccccch---hh-------------------hhhhhh
Confidence 3454444 656555555433 3344555432211100 00 012246
Q ss_pred ccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 015847 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (399)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (399)
.+++|+++...+..++.......+..+.+.|.... .+.+.+....+.++...++.....+. ..+++.||.++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQY-SVGRRLNAANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeehh-HHHHHHccCCchhHH
Confidence 78888888777776666655555555566665432 12566777888888888777777763 667788889999988
Q ss_pred HHHHHHHHHHHhHHhH
Q 015847 358 RIAGVLTIPLLTSYPY 373 (399)
Q Consensus 358 ~~~~~~~~~~~~~~~~ 373 (399)
..+..+..++...+..
T Consensus 278 ~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 278 TAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777777665544
No 62
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=1.1e-25 Score=216.60 Aligned_cols=279 Identities=17% Similarity=0.215 Sum_probs=198.7
Q ss_pred hhHHHHHHHhccC---ccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHH
Q 015847 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (399)
Q Consensus 62 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 138 (399)
+..+.+.+|++++ ..+ .++..+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5667888999998 677 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchh
Q 015847 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (399)
Q Consensus 139 ~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~ 217 (399)
++.|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|.+++|.+++.+.+ |+.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 9999999999888776 49999999999999999999999999999999998876642 444
Q ss_pred hHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchh--hhhhhh---------hhh---hhhhccccCCcccccccccch
Q 015847 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALES---------ASA---EVKEEEGREATPKKSLLKNWP 283 (399)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~ 283 (399)
.+.+.+++.++..+..+++||++++...+.+.++.. .++..+ ..+ +.++++.+.+...++++++|.
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 447777777766666688899887543322211111 000000 000 000001111235667888888
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (399)
++...+...+..+........++.+... .+.+.. ......++..+++. ++.+++.||+|||+.+..+.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~ 394 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLDLGN------LGGNIY---LDLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLL 394 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc------cCCChH---HHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHH
Confidence 8776655544433322222222322221 344433 23334456666666 4788999999999999988888
Q ss_pred HHHHHhHHhHHH
Q 015847 364 TIPLLTSYPYIA 375 (399)
Q Consensus 364 ~~~~~~~~~~~~ 375 (399)
.+++.+.+.+.+
T Consensus 395 ~~~~~l~~~~~~ 406 (505)
T TIGR00898 395 AGVALLLLLFVP 406 (505)
T ss_pred HHHHHHHHHHcC
Confidence 887776665543
No 63
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=3.2e-25 Score=208.24 Aligned_cols=284 Identities=13% Similarity=0.081 Sum_probs=211.4
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+....++..+......+.+|.+.++++.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 344456666677778888899999999888888 99999999999999999999999999999999988877777
Q ss_pred HHHHHh-----ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 125 FNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 125 ~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
+.+..+ ..++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.....++|..+||.+++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~--- 171 (417)
T PRK10489 95 GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA--- 171 (417)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH---
Confidence 665443 2567889999999999988877665 8899999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
..||++. +.+.++..++..+..+.+||++++++++++..+ +..+..+..
T Consensus 172 ----~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------------~~~~~~~~~ 220 (417)
T PRK10489 172 ----AGGVAWN---------YGLAAAGTFITLLPLLRLPALPPPPQPREHPLR------------------SLLAGFRFL 220 (417)
T ss_pred ----HHhhHHH---------HHHHHHHHHHHHHHHHhCCCCCCCCcccccchH------------------HHHHHHHHH
Confidence 3444443 356555555555556667765432211100000 001123345
Q ss_pred cccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
+++|.++...+..++... ......++|.|..+. +|.++.+.|.+.+..+++.+++.. +.+++.||.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLML 293 (417)
T ss_pred HcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHH
Confidence 677776655544444332 345666788887775 788999999999999999999985 7889999877777777
Q ss_pred HHHHHHHHHHhHHhHHH
Q 015847 359 IAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (399)
.+.++..++++.+...+
T Consensus 294 ~~~~~~~~~~~~~~~~~ 310 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMP 310 (417)
T ss_pred HHHHHHHHHHHHHHccc
Confidence 77777666666554443
No 64
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.4e-25 Score=208.65 Aligned_cols=277 Identities=17% Similarity=0.248 Sum_probs=221.1
Q ss_pred HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHh
Q 015847 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (399)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 146 (399)
.+++.+..+ .+++.+++..|+++++++.|+++||+|-|+++..+.++.++++++...+. +++.+++.|+++|
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 467788888 99999999999999999999999999999999999999999999988864 4567899999999
Q ss_pred hhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHH
Q 015847 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 225 (399)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~ 225 (399)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++-+++|++.+. .+||+..| ++.+..
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~sif---------Y~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWPSIF---------YVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCchHH---------HHHHHH
Confidence 999998886 99999999999999999999999999999999999999982 25666555 888888
Q ss_pred HHHHHHHHHh-cccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHH
Q 015847 226 AFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 304 (399)
Q Consensus 226 ~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
+++..++++. ..|+|.+++.-.++ | .+.+++.+.+...+ ++.+.+++++++++.+|...+..+..+.....+..+
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~-E--l~~I~~~k~~~~~~-~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISEK-E--LKYIEKGKSEAHVK-KKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHH-H--HHHHHhcccccccC-CCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776666544 45555442221111 1 11111111111111 115678999999999999999999999999999999
Q ss_pred HHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------hhHHHHHHHHHHHHHhHHhHHH
Q 015847 305 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
.|.|+.++ +|++..+.|++.++..+...+... +++.++||+.+ |..-.++....+++++.+++.+
T Consensus 281 ~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k~-~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 281 LPTYLKEV-----LGFDVRETGFLSALPFLAMAIVKF-VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 99999998 899999999999999999999984 89999998754 2223455666666666666665
Q ss_pred H
Q 015847 376 M 376 (399)
Q Consensus 376 ~ 376 (399)
.
T Consensus 355 ~ 355 (466)
T KOG2532|consen 355 D 355 (466)
T ss_pred C
Confidence 3
No 65
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=6.4e-25 Score=207.24 Aligned_cols=284 Identities=14% Similarity=0.066 Sum_probs=202.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.++...+.....+..........|.+.+ +|.++.+ .++..+++.++..+++++.|+++||+|||+++..+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~ 99 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 99 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHH
Confidence 33344445555556666666667777765 5999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc----chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 121 SVVIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 121 ~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+++.++.+.. ++++.+.+.|++.|++.+...+ ....+.|++|+++|++++++.+.+.++|+.++|.+.+...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 100 LSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 999888877664 4677888999999999887666 58889999999999999999999999999999888776543
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (399)
. ..+||..| +..++..++. ++..+.+||++++...++.+..+. +..+...++ .+++.+.+..
T Consensus 180 ~------~~~w~~~f---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 242 (438)
T TIGR00712 180 W------FNDWHAAL---------YFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNEK-AEQELTAKEI 242 (438)
T ss_pred H------hhhhHHHH---------HHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccccccc-cccccchHHH
Confidence 1 23455444 6666665553 444566777654321111000000 000000000 0000000001
Q ss_pred -cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 275 -KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
.+..++++.++...+..++......+...++|.|+++. .|+++.+++.......+..++++. +.+++.||.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~ 316 (438)
T TIGR00712 243 FMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFK 316 (438)
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 12367888888877776666666667778899998875 688999999999999999999884 89999999864
Q ss_pred h
Q 015847 354 I 354 (399)
Q Consensus 354 ~ 354 (399)
+
T Consensus 317 ~ 317 (438)
T TIGR00712 317 G 317 (438)
T ss_pred C
Confidence 3
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.94 E-value=4.1e-24 Score=198.21 Aligned_cols=282 Identities=15% Similarity=0.145 Sum_probs=210.8
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhh----HHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGT 119 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~ 119 (399)
..+...++......+...|++|.+.+++|.|..+ +|++.+++.+...++++++|+++||+|||+.. ..+.
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 80 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3355667777777788999999999999999999 99999999999999999999999999985433 2222
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
.+..+ ..+..+++++.+++.|+++|.+.+...|. .++..|+ +++|++.+|......++|.+++|.+++.+.+
T Consensus 81 ~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~--- 153 (382)
T TIGR00902 81 AIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG--- 153 (382)
T ss_pred HHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH---
Confidence 22222 23446789999999999999887666664 6666554 5788999999999999999999999999998
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
.+|||..| .+.....++.+ ....++|++++++++++ + +.....+.++.
T Consensus 154 ----~~g~~~~f---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~ 201 (382)
T TIGR00902 154 ----MFDEQNIL---------AILTAGLAFML-IGFLIKPTIPPKDAIPE--D----------------ESQGDSAFIAL 201 (382)
T ss_pred ----HcChhHHH---------HHHHHHHHHHH-HHHHcCCCCCCCccccc--c----------------ccccchhHHHH
Confidence 55666554 44443322222 22333443211111100 0 00011235678
Q ss_pred cccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (399)
+|+|+++...+..++.......+.++.|.|+++ .|.++.++|.+++...+..++.. ...+++.||+++++.+.
T Consensus 202 l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~ 274 (382)
T TIGR00902 202 LKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLL 274 (382)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHH
Confidence 899999998888888888888888899988865 68999999999998888888887 58899999999999999
Q ss_pred HHHHHHHHHHhHHhHHHHH
Q 015847 359 IAGVLTIPLLTSYPYIAML 377 (399)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~ 377 (399)
++.+...+....+.+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR00902 275 ISAIACVGRWAIIGAIEAF 293 (382)
T ss_pred HHHHHHHHHHHHHHhHhhH
Confidence 9999998888877665543
No 67
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.8e-25 Score=207.08 Aligned_cols=292 Identities=16% Similarity=0.134 Sum_probs=222.8
Q ss_pred HHHHHhhccc-cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH
Q 015847 48 IIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (399)
Q Consensus 48 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 126 (399)
..++...... +...+.+..+.+|.+....+ .+.+.++++++++++++++|.+.||++-.+.+....+++.+..
T Consensus 52 ~~y~~~~~d~~si~~a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~ 125 (495)
T KOG2533|consen 52 YLYFHAYLDKSSIVNASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFG 125 (495)
T ss_pred HHHHHHhcchhcchhHHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 3334444433 23334444455788888888 9999999999999999999999999999999998888888888
Q ss_pred HHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccc
Q 015847 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (399)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~g 205 (399)
++.+..+|++.+++.|++.|+.++...|+ ..+++.|+.+++|++.++++.+..++|+++|.+++..+.+. .+.....|
T Consensus 126 ~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~-~~~~~~~g 204 (495)
T KOG2533|consen 126 FLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKL-NGSGGLAG 204 (495)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhh-cCCCCcCC
Confidence 88878999999999999999999998886 99999999999999999999999999999999999987542 11122566
Q ss_pred ccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchh-hhhhhhhhhhhhhccccCCcccccccccch
Q 015847 206 SESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVS-YDALESASAEVKEEEGREATPKKSLLKNWP 283 (399)
Q Consensus 206 w~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (399)
||+.| ++.+++.++. +++.+++|+.|.+..-.+++++.. .++.++......+++ .++...++.+++|.
T Consensus 205 W~~~F---------iI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~dp~ 274 (495)
T KOG2533|consen 205 WRWLF---------IIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKDPG 274 (495)
T ss_pred ceeeh---------hHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhchh
Confidence 76666 7877777664 455778898887543222211111 111111111111111 44556778899999
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cchhHHHH
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL----GPIMVARI 359 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~ 359 (399)
+|...+..++......++.+++|.|+.+. .|++..++..+..+..++++++.+ +.++++||+ .++.....
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGLI-LAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcC-----CCcChHHhccccchHHhhhHHHHH-HHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999884 679999999999999999999985 899999994 44444444
Q ss_pred HHH
Q 015847 360 AGV 362 (399)
Q Consensus 360 ~~~ 362 (399)
...
T Consensus 349 ~~~ 351 (495)
T KOG2533|consen 349 FLC 351 (495)
T ss_pred HHH
Confidence 333
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=6.5e-24 Score=196.89 Aligned_cols=275 Identities=14% Similarity=0.153 Sum_probs=201.5
Q ss_pred HHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCc----hhhHHHHHHHHHH
Q 015847 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (399)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~ 125 (399)
.+......+...|.+|.+.+++|.|..+ +|+..+++.++..++++++|+++||+||| +.+.++..+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4444556688899999999999999999 99999999999999999999999999984 3333222222 2
Q ss_pred HHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcc
Q 015847 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (399)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~ 204 (399)
......+++++.+++.|++.|++.+...|. .++..++ +++|+++++......++|..+||++++++.+ .+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-------~~ 155 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-------WF 155 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-------Hc
Confidence 233344688999999999999987777765 6666665 4668888999999999999999999999998 44
Q ss_pred cccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchh
Q 015847 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (399)
Q Consensus 205 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (399)
|||.. ++..++..++..+..+..||++++.++++ + .++...+.++++|+|.+
T Consensus 156 g~~~~---------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 156 GEQAI---------LWILTAGVASMLLGQLLRPTIMPQGESRQ---Q----------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred ChhHH---------HHHHHHHHHHHHHHHHccCCCCCcccccc---c----------------cccccchHHHHHcChhH
Confidence 55544 45555444433333344454322111100 0 00012356678899999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 015847 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (399)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (399)
+...+..++..........+++.|..+ .|+++.+.|.+.+...+..++.. +..+++.||+++++.+..+.+..
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHH
Confidence 988777777777777777788888754 68899999999998888888877 48889999999999988888888
Q ss_pred HHHHhHHhHHHH
Q 015847 365 IPLLTSYPYIAM 376 (399)
Q Consensus 365 ~~~~~~~~~~~~ 376 (399)
++..+.+...++
T Consensus 281 ~~~~~~~~~~~~ 292 (382)
T PRK11128 281 VVRWGLMGSTTA 292 (382)
T ss_pred HHHHHHHHhhhh
Confidence 877766655443
No 69
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=8e-26 Score=196.74 Aligned_cols=262 Identities=16% Similarity=0.156 Sum_probs=212.3
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (399)
+|++.++..+.+.+.+++.|.+.||+|+|.++++|.+.+..+++++++.++++.++++|.+||+|.++..++ .++++|.
T Consensus 108 iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~ 187 (464)
T KOG3764|consen 108 IGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADV 187 (464)
T ss_pred hhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998886 9999999
Q ss_pred ccch-hhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCC
Q 015847 163 FREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (399)
Q Consensus 163 ~~~~-~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (399)
+|++ +|++++|+...+.++|..+||.+||.+.+ ..+++.||.+.+++.++-....+++-|+.+
T Consensus 188 f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 188 FPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred cccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 9965 58999999999999999999999999998 566778889999998887666555544332
Q ss_pred CCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccc
Q 015847 242 RHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (399)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (399)
.++++. .+..+.++++++|.++.........+.......-.++.|..+. +.-+
T Consensus 252 ~~~~~~----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~-----m~~p 304 (464)
T KOG3764|consen 252 MDPDST----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET-----MFTP 304 (464)
T ss_pred cCcccc----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh-----ccCC
Confidence 222111 1123577899999998877776666666666666677776665 5534
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHH
Q 015847 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCA 389 (399)
Q Consensus 322 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
.-+.|..+....+...++.. +.+.+.||++ |......+.+...++...+++.+.....++.......
T Consensus 305 ~w~~G~~fLp~~~~y~ig~~-lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~ 373 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGTN-LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGF 373 (464)
T ss_pred CcceeeeecccccchhccCc-hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHH
Confidence 44889999999999999984 8899999999 6555566777777778888888877776654444333
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=1.4e-23 Score=192.26 Aligned_cols=260 Identities=24% Similarity=0.392 Sum_probs=221.0
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+....+....+.....+..|.+.+++|.+..+ .++..+...++..+++++.|+++||+|||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345566777888888999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc
Q 015847 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (399)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~ 203 (399)
+.+...+.++++.+++.|++.|++.+...+. .+++.|++|+|+|++.+++.+....+|..++|.+++.+.+ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~ 149 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------S 149 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-------H
Confidence 9999999999999999999999998887775 9999999999999999999999999999999999999987 3
Q ss_pred ccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccch
Q 015847 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (399)
Q Consensus 204 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (399)
.+| +..+.+.++..++..+...+++ |.
T Consensus 150 ~~~---------~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 150 LGW---------RWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred hhH---------HHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 344 4444666666665555444443 34
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-HHHHHHH
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 362 (399)
++...+..++..........+.+.+..+. .|.+..+.+.......++..++.. +.+++.||.++|+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGAL-LGGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHH
Confidence 66667777777777778888888887764 588999999999999999999984 8889999999999 8888888
Q ss_pred HHHHHHhHHhHHHH
Q 015847 363 LTIPLLTSYPYIAM 376 (399)
Q Consensus 363 ~~~~~~~~~~~~~~ 376 (399)
+..++...+...++
T Consensus 251 ~~~i~~~~~~~~~~ 264 (352)
T cd06174 251 LAALGLLLLALAPS 264 (352)
T ss_pred HHHHHHHHHHHhcc
Confidence 88888777765543
No 71
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=7.3e-24 Score=197.38 Aligned_cols=274 Identities=15% Similarity=0.135 Sum_probs=192.8
Q ss_pred HhhccccchhhhHHHHHHHhcc--CccccchhhhhhHHH-----HHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 52 CTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVG-----SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+.++...+....+.+.+++.. ++.+ .+... ....++..+++++.|+++||+|||+++..+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~ 77 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGI 77 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHH
Confidence 4556666677777777777543 3333 33333 334444567899999999999999999999999999
Q ss_pred HHHHHhccchHH--------HHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 125 FNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 125 ~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+++++++++. .+++.|+++|++.+...+ ..+++.|++|+++|++..+..+.+..+|..+++.++..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~ 157 (394)
T TIGR00883 78 GTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSY 157 (394)
T ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988865 478899999999888766 49999999999999999999999999999999998877653
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccc
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
. .+.... ..++|+.++.+.++..++........||++++++++++ +++...+.
T Consensus 158 ~-------~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 210 (394)
T TIGR00883 158 L-------LGDDAL-LEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGPI 210 (394)
T ss_pred h-------cCHHHh-hccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCCH
Confidence 1 110000 13456666676666655555444555665432211100 00111233
Q ss_pred ccccccch--hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 276 KSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 276 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
++.+++++ ++......++..........++|.|..+. +|.++.+.+.......++..++. ++.+++.||+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~ 284 (394)
T TIGR00883 211 RETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----LGLSANSALLVLMLSLILFFITI-PLSGALSDRIGR 284 (394)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhch
Confidence 44455544 56656666666666666777888888655 78888999999999999999988 488999999999
Q ss_pred hhHHHHHHHHH
Q 015847 354 IMVARIAGVLT 364 (399)
Q Consensus 354 ~~~~~~~~~~~ 364 (399)
|+.+..+..+.
T Consensus 285 ~~~~~~~~~~~ 295 (394)
T TIGR00883 285 RPVLIIFTVLA 295 (394)
T ss_pred HHHHHHHHHHH
Confidence 98776554433
No 72
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=193.09 Aligned_cols=291 Identities=21% Similarity=0.221 Sum_probs=207.7
Q ss_pred HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc---cchHHHHHHHHHH
Q 015847 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (399)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l 144 (399)
.+++|.+.++++.....+.+.+++.+|.++|+++.|.++||+|||..+.++.++..++.+++.+ .+++..++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3567766666667777999999999999999999999999999999999999888887777665 5789999999999
Q ss_pred HhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHH
Q 015847 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (399)
Q Consensus 145 ~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 223 (399)
.|+..|..... ..++.|..|.+.||..-.+.+.+..+|..++..++.--. +|- ...|.+.+....
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------lGt-----~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------LGT-----EDLWPYLLAFPL 191 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------cCC-----CcchHHHHHHHH
Confidence 99998887774 999999999999999988889999999888866553221 110 223566667788
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-CCCccchhh--h----------hhhhhhhhhhhccc--cCCcccccccccchhHHHH
Q 015847 224 LFAFGVTIAAFWLPETLHRHND-DDDSCDVSY--D----------ALESASAEVKEEEG--REATPKKSLLKNWPLMSSI 288 (399)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~--~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 288 (399)
+++++.++...++||+|++.-. +++++++.+ + +.++..++.++++. +...+.++++++|..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 8888888889999999997654 233222211 0 01111111111111 2445677888887776542
Q ss_pred HHHH-HHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 015847 289 IVYC-VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (399)
Q Consensus 289 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (399)
...+ +..............|..+ ...+.|++..++-+.....++...+.++ ++.++.||.|||++++.+..++.+.
T Consensus 272 ~i~~~v~~~qq~sGi~ai~~Yst~--i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGINAIFFYSTS--IFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHhcCcceeHHHHHH--HHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 2222 2222222222222222221 2222789999999999999999999994 9999999999999999999888887
Q ss_pred HhHHhHHH
Q 015847 368 LTSYPYIA 375 (399)
Q Consensus 368 ~~~~~~~~ 375 (399)
.+++....
T Consensus 349 ~~~~~~~~ 356 (485)
T KOG0569|consen 349 LLLMSIAL 356 (485)
T ss_pred HHHHHHHH
Confidence 77665443
No 73
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=3.9e-23 Score=190.05 Aligned_cols=278 Identities=12% Similarity=0.202 Sum_probs=198.6
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-----CCchh-hHHHHHHHHHHHHHH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLF 129 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~ 129 (399)
......+.+|.+.+|+|+|.++ .|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....
T Consensus 3 ~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 3 PLGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred CchhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999999999 9998755 444444 89999999998 89887 466777777776666
Q ss_pred hcc---chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccc
Q 015847 130 GLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (399)
Q Consensus 130 ~~~---~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~g 205 (399)
++. .+.+.+....++.+++.+...+. .+++.|++|+|+|+++.++...+..+|..+++.+++.+.+ ..|
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g 147 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEF 147 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hcc
Confidence 666 45666777777788777776665 9999999999999999999999999999999999999987 333
Q ss_pred ccccccCCcchhhHHHHHHHHHHHHHHHHh-cccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccch-
Q 015847 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP- 283 (399)
Q Consensus 206 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (399)
... +.+++|+.++.+.++..++..+..++ .||+.++.+.+ + +.. . +.....++++++|.
T Consensus 148 ~~~-~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~--~~~--------~-------~~~~~~~~~~~~~~~ 208 (356)
T TIGR00901 148 ANT-GLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP-K--PLT--------Q-------AVLKPIREFFQRKNM 208 (356)
T ss_pred ccc-ccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc-h--hHH--------H-------HHHHHHHHHHHhcCc
Confidence 222 12555777778887776665555443 46643211110 0 000 0 00112344556654
Q ss_pred --hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcchhHHHHH
Q 015847 284 --LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIA 360 (399)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (399)
++...+..++..........++|.|+.+ +|+++.+.+.+....+. ..+++. ++++++.||+++|+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 209 IQALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLF 281 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHH
Confidence 6666666666666667777888888765 68899999988887774 555666 5889999999999988888
Q ss_pred HHHHHHHHhHHhHH
Q 015847 361 GVLTIPLLTSYPYI 374 (399)
Q Consensus 361 ~~~~~~~~~~~~~~ 374 (399)
.++.++....+.+.
T Consensus 282 ~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 282 GIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777666555443
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=1e-22 Score=190.28 Aligned_cols=276 Identities=14% Similarity=0.210 Sum_probs=200.3
Q ss_pred HHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-----CCch-hhHHHHH
Q 015847 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (399)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~ 120 (399)
...++..+...+.....+|.+.++.|++.++ +|++..+... .+..+++|+++||+ |||| .+.++.+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 3456677788888899999999999999999 9999777765 58899999999999 8875 6888888
Q ss_pred HHHHHHHHHhcc---chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 121 ~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
+.+++....++. ++++.+++..++.++..+...+. .+++.|++|+++|+++.++...+.++|..+++.+++.+.+
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~- 155 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD- 155 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-
Confidence 887777776665 35777777777788777777775 9999999999999999999999999999999999999886
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccc
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (399)
.. ++|+..+.+.++..++..+..++.||++++++++++ .. + +.....+
T Consensus 156 ------~~--------~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~---~~--------~-------~~~~~~~ 203 (402)
T PRK11902 156 ------RV--------LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRS---LG--------E-------AVVGPLR 203 (402)
T ss_pred ------cc--------cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccch---hH--------H-------HHHHHHH
Confidence 21 244555577666666555555667775433211100 00 0 0112455
Q ss_pred cccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcchh
Q 015847 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 355 (399)
+++|+|.++...+..++..........+.+.++.+. +|+++.+.+.+....+. +.+++. .+.+++.||+++|+
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~-----~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRG-----AGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHH
Confidence 678899888777766665554433333444444433 78899999998876654 466666 58899999999988
Q ss_pred HHHHHHHHHHHHHh
Q 015847 356 VARIAGVLTIPLLT 369 (399)
Q Consensus 356 ~~~~~~~~~~~~~~ 369 (399)
.+..+.....+..+
T Consensus 278 ~l~~~~~~~~l~~l 291 (402)
T PRK11902 278 SLMLFGVLQAVSNL 291 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 87766666555443
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=1.7e-22 Score=192.65 Aligned_cols=282 Identities=13% Similarity=0.162 Sum_probs=202.8
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-----CCchh
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~ 114 (399)
+++...++...+..+.......+.+|.+.++.|.+..+ ++.. +...... ++.+++|+++||+ ||||.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 34566666777778888888899999999999999988 8886 3333333 5889999999999 99885
Q ss_pred -hHHHHHHHHHHHHHHhcc---chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHh
Q 015847 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 115 -l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
+..+.+..+++...+++. ++++.+.+.+++.+++.+...+. .++..|++|+++|+++.++...+..+|..+++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777777666664 47888999999999987777664 9999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccc
Q 015847 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (399)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
++++.+. ..| |+..+++.++..++..+..++.||++++.++++ +.. +
T Consensus 163 ~~~l~~~------~~G---------Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~~---~~~---------------~ 209 (491)
T PRK11010 163 ALWLADR------YLG---------WQGMYWLMAALLIPCIIATLLAPEPTDTIPVPK---TLE---------------Q 209 (491)
T ss_pred HHHHHhc------ccC---------HHHHHHHHHHHHHHHHHHHHhcCCCcccccccc---chh---------------h
Confidence 9999861 124 455557777776666655556777543211100 000 0
Q ss_pred cCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHH-HHHHHHHHHHHHHHHHHH
Q 015847 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLE 348 (399)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~~~~~~~~~~~~~~l~ 348 (399)
....+.++.+++++.+...+..++..........+.+.|+.+. +|+++.+.+.... ...++.+++. ++++++.
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~-----~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~ 283 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRG-----VGFDAGEVGLVNKTLGLLATIVGA-LYGGILM 283 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0011344566677766665555555555555566667676544 7899999999875 4456777777 5899999
Q ss_pred HHhcchhHHHHHHHHHHHHH
Q 015847 349 RILGPIMVARIAGVLTIPLL 368 (399)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~ 368 (399)
||+++++.+.++.++.++..
T Consensus 284 dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 284 QRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHhHHHHHHHHHHHHHHHH
Confidence 99999887776655544433
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=4.6e-22 Score=185.20 Aligned_cols=273 Identities=15% Similarity=0.205 Sum_probs=181.7
Q ss_pred HHHHHHHHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccCCchhh-HHHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGTA 120 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~ 120 (399)
....+..++.........|.+|. +.+++|.++.+ .|+..+...+ +..++.++.|+ +||+||||.+ ..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~ 90 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCL 90 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHH
Confidence 34455577777777778888885 56889999999 9999876655 55555555555 9999999875 45566
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhh--hHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ--ALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
..+++..+.+++++++.+++.+.+.|...+...|. .++..|+.++++| +...+..+.+.++|..+||++++++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-- 168 (393)
T PRK15011 91 LGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-- 168 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--
Confidence 66677777888899998876665555444455664 7788887776655 344578888999999999999999987
Q ss_pred CCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccc
Q 015847 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (399)
Q Consensus 198 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (399)
.+|||..| ...++..++.. .....+||.+++++++++ + . + ..
T Consensus 169 -----~~gw~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~----------------~---~~- 211 (393)
T PRK15011 169 -----GFSFTVMY---------LSAAVAFIVCGVMVWLFLPSMRKELPLATG--T-L----------------E---AP- 211 (393)
T ss_pred -----hcChHHHH---------HHHHHHHHHHHHHHHhhcCccCCCCccccc--c-c----------------c---cc-
Confidence 45555444 66666555543 345557776432211100 0 0 0 00
Q ss_pred ccccc-chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 015847 277 SLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (399)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (399)
.++ +..+...............+..++|.|+++. +|+++.+++.+.+...++.+++. ++.+++.||+++|+
T Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~ 283 (393)
T PRK15011 212 --RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRF 283 (393)
T ss_pred --ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHH
Confidence 011 2223333333333344445556788787665 78899999988887777777777 58899999999998
Q ss_pred HHHHHHHHHHHHHhH
Q 015847 356 VARIAGVLTIPLLTS 370 (399)
Q Consensus 356 ~~~~~~~~~~~~~~~ 370 (399)
.+..+.....+....
T Consensus 284 ~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 284 LMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHHHH
Confidence 877665555444433
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=4.1e-22 Score=174.95 Aligned_cols=303 Identities=17% Similarity=0.163 Sum_probs=239.6
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+..+..+....++.++......+.+|.+.+.++++..| .+++..+++.++.+.+++.|++.+|+|+|+-++.|.
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHH
Confidence 34556677778888888899999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh---ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++++++.++. ...++..++++-++.|.|.+...+. .++++...++++..+.+++.+...++|.+++|++++.+..
T Consensus 86 ~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 86 LLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999884 5578889999999999999998885 9999999999999999999999999999999999999986
Q ss_pred CCC----CCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcc--cCCCCCCCCCCccchhhhhhhhhhhhhhhccc
Q 015847 196 PAE----KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP--ETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (399)
Q Consensus 196 ~~~----~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
+.. +-.....|+... --.++.++...+...++..+.....| +.++..+++.+
T Consensus 166 s~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~--------------------- 223 (422)
T COG0738 166 SGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA--------------------- 223 (422)
T ss_pred hhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc---------------------
Confidence 210 000011233322 22255555666555544444433322 22211111110
Q ss_pred cCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (399)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
.......+++++|.++...+..+++...+....++++.|+.+. .|.+..+++...+..-.+.++++ +++.++.+
T Consensus 224 ~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGR-Fig~~lm~ 297 (422)
T COG0738 224 SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGR-FIGSALMS 297 (422)
T ss_pred cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0111456889999999999999999999999999999999887 78899999999999999999999 58888888
Q ss_pred HhcchhHHHHHHHHHHHHHhHHhHHHH
Q 015847 350 ILGPIMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
|+...|.+....+...+.++...+.++
T Consensus 298 ~~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 298 RIKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988877776666666655554
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.91 E-value=1.1e-22 Score=214.38 Aligned_cols=304 Identities=18% Similarity=0.122 Sum_probs=209.9
Q ss_pred hHHHHHHHHHHHhhcccc-chhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPIS-SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+.+...++..++..+... ......+.+..+++.+... ...+++.+++.++..++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 344444555555544443 3334445666666654332 22789999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh---ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
++.++..++.. ..++++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+..+|.++||.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665554433 4578999999999999999988886 9999999999999999999999999999999999999986
Q ss_pred CCCCCCCcccc--cccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCc
Q 015847 196 PAEKYPNLFSS--ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (399)
Q Consensus 196 ~~~~~~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (399)
. +++ ...+ .+.++..++......++.++..+.+||.++....+.+..+.. . ......
T Consensus 165 ~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ 223 (1146)
T PRK08633 165 S-------VNGNTPSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL--F-----------PKLLWR 223 (1146)
T ss_pred h-------hcccccccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc--c-----------HHHHHH
Confidence 2 000 0000 111222223333333344444556677654332211000000 0 000111
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015847 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILG 352 (399)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (399)
..+.+++++.++...+..++.......+..++|.|+.+. +|++.. +.+++.+..+++.+++.. +.+++.||.+
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~ 297 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV-----LGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHI 297 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCce
Confidence 345567888888777777766666666777888887765 788888 899999999999999884 8899999999
Q ss_pred chhHHHHHHHHHHHHHhHHhHHH
Q 015847 353 PIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
+++.+.++.++.+++++.+.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 298 ELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred EccchhHHHHHHHHHHHHHHHhh
Confidence 88888887777777666665444
No 79
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=2.7e-22 Score=190.01 Aligned_cols=296 Identities=21% Similarity=0.239 Sum_probs=228.8
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
.+.+.+..++.+.++..++..+....++-+..+..-|+.. .+++..+..+...+.++++|.++||++|||+++.
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili~ 80 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILIL 80 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence 3446677888899999999999998888888777777777 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-----cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 118 GTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 118 ~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
+-++.++..+..++ ..+.+.+++.-++.|++.+...|+ .+++.|..|+++...++++.+...++...+||.++|
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 98877655544433 247888999999999999999997 999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccC
Q 015847 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (399)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (399)
.+.. ..+....+.+.++..++.+......+.+.++.+.++ +.. .+..
T Consensus 161 ~Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~---e~~--------------~~~l 207 (524)
T PF05977_consen 161 ILVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR---ERF--------------FSAL 207 (524)
T ss_pred HHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccch---hhh--------------hhhH
Confidence 9987 233334446666555555544444443322111111 000 0011
Q ss_pred CcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015847 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (399)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (399)
....+...++|.+...++..+++++....+...+|.+..+. +|.++...|++.+..+++.+++.+ +.+++.+|+
T Consensus 208 ~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-----l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~ 281 (524)
T PF05977_consen 208 REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-----LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRL 281 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhccc
Confidence 12445566677777766666666766667777888887766 788999999999999999999995 788899999
Q ss_pred cchhHHHHHHHHHHHHHhHHhHHHHHH
Q 015847 352 GPIMVARIAGVLTIPLLTSYPYIAMLS 378 (399)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (399)
++++.+..+.+..+++++.+++.++..
T Consensus 282 ~~~~lv~~~~~~~a~~~~~lal~~~~~ 308 (524)
T PF05977_consen 282 SSRRLVLLASLLFALALLLLALSPSFW 308 (524)
T ss_pred CcchhhHHHHHHHHHHHHHHhcchHHH
Confidence 998888888888888887777665543
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=5.3e-22 Score=185.10 Aligned_cols=290 Identities=13% Similarity=0.145 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
.++.+....++.........|.+|.+ .+++|.+..+ .|++.+++.++..+++++.|+++||+|||+.++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34556666777777788888999865 4678999999 9999999999999999999999999999999988776
Q ss_pred HHHHHHHHH---hccc-----hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 121 SVVIFNTLF---GLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 121 ~~~~~~~~~---~~~~-----~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
..+++.... .+.+ ....+++.+++.|++.+...+. ..+..|.. +++++.++......++|.++||.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHh
Confidence 665544322 1121 2334566788888887776664 66666643 33456777888888999999999999
Q ss_pred hhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhc-ccCCCCCCCCCCccchhhhhhhhhhhhhhhcccc
Q 015847 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (399)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (399)
.+.+ .+ |+.++...+++.++..+..+.. ||+++++ ++++..+ .++++.
T Consensus 155 ~l~~--------~~---------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~ 203 (396)
T TIGR00882 155 ILFS--------ID---------PQIVFWLGSGFALILMLLLMFAKPKAPSSA-TVANALG-------------ANASAF 203 (396)
T ss_pred hhhc--------cC---------chHHHHHHHHHHHHHHHHHHHhCCCCchhh-hhhcccc-------------cccCCC
Confidence 8864 23 4445566666666554444443 3332211 0000000 000111
Q ss_pred CCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (399)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
+.++.++.+|||+++...+..+...........+++.|+.+.... .+.+....|...+...+...++. ...+++.||
T Consensus 204 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~--~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r 280 (396)
T TIGR00882 204 SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFAT--PQQGTRVFGYVTTMGELLNALIM-FCAPLIINR 280 (396)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cccchHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 122456778899887766665555554445555667776554211 24566678888888888888887 478999999
Q ss_pred hcchhHHHHHHHHHHHHHhHHhH
Q 015847 351 LGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
+++|+.+.++..+.++....+..
T Consensus 281 ~g~~~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 281 IGAKNALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred hccchhHHHHHHHHHHHHHHHHh
Confidence 99999988888877776655443
No 81
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=6.8e-22 Score=189.90 Aligned_cols=297 Identities=15% Similarity=0.117 Sum_probs=193.5
Q ss_pred ccchhhhHHHHHHHhccCccccchh-hhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 57 ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
.....+....+.++...+....... ...+++.++..++..+++++.|+++|++|||+.++++.+.+.++.+++++++|+
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~ 142 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW 142 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4555666666655432222111100 115899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
++++++|++.|+|.|.... +..+++|..|++.||...+..+....+|..++..++....+ . .++
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-------~--------~~~ 207 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-------V--------YAG 207 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------C--------Ccc
Confidence 9999999999999888666 59999999999999999999999999999999655555543 0 035
Q ss_pred chhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchh--hhhhhh------------hhhhh-hhccc-cCCcccccc
Q 015847 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALES------------ASAEV-KEEEG-REATPKKSL 278 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~------------~~~~~-~~~~~-~~~~~~~~~ 278 (399)
||.++.+..+.+++..+..+++||+|++..++.+..+.. ...+.. .+.+. .+... .....+.++
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGEL 287 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHh
Confidence 666778888888887777888999998765433222211 111110 00000 00000 011112333
Q ss_pred cccchhHHHHHHHHHHHhhhhh----HHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 015847 279 LKNWPLMSSIIVYCVFSLHDMA----YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (399)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (399)
++........+...+..+++.. ...+.+...+. .|.+... .......++..+++.. ++..+.||.|||
T Consensus 288 ~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~------~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr 359 (513)
T KOG0254|consen 288 FSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS------AGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRR 359 (513)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh------cCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccH
Confidence 3321222222233333333222 22222322222 3444332 3334444555555553 668899999999
Q ss_pred hHHHHHHHHHHHHHhHHhHHHH
Q 015847 355 MVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
+.++.+...+.++.++++....
T Consensus 360 ~lll~s~~~m~~~~~~~~~~~~ 381 (513)
T KOG0254|consen 360 KLLLFGAAGMSICLVILAVVGV 381 (513)
T ss_pred HHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999988887765543
No 82
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.5e-21 Score=184.11 Aligned_cols=321 Identities=17% Similarity=0.165 Sum_probs=230.5
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
+.|-..+...+..............+.+.++++++.+..+ ++|+.++......+..|+.+.+.||+|.|.+.+.
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~ 116 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIA 116 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHH
Confidence 3444444444444444444555567788999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHH-HHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 118 GTASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
|.++..++.++.+++++.|++++.. ++.|+|.|+... ...++..+| +|+|+.+.|+...+.++|..+-|.+..++.+
T Consensus 117 G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 117 GGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 9999999999999999999998877 888999888554 577777555 5889999999999999999999999999998
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhccc-CCCCCCCC--------------C-----Cc---cch
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHNDD--------------D-----DS---CDV 252 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~--------------~-----~~---~~~ 252 (399)
+++|+...++.+.+.+-.++....+++ +++..+.+ . +. ...
T Consensus 196 ----------------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (509)
T KOG2504|consen 196 ----------------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSG 259 (509)
T ss_pred ----------------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCC
Confidence 444454446666666655555444433 22211110 0 00 000
Q ss_pred hhh----hhhhhhhhhhhcc-ccCCc----ccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchh
Q 015847 253 SYD----ALESASAEVKEEE-GREAT----PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (399)
Q Consensus 253 ~~~----~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (399)
... ..+...+..++.+ ..... -..+++++|.++...+...+..........++|.|..+ .+++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~~~~ 333 (509)
T KOG2504|consen 260 LKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGLSSN 333 (509)
T ss_pred CCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCChh
Confidence 000 0000000000000 01111 13578999999999999999999999999999988885 799999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Q 015847 324 MVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNC 388 (399)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
+++.+++..++..+++++ +.|++.|+.. ++.+..++.+..+++....++.+.......+.+++.
T Consensus 334 ~aa~l~Siigi~~i~gRi-~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 334 DAAFLLSIIGVSDIIGRI-ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred hhHHHHHHHHHhhhhhhh-hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999995 8999999876 444555666666777666666666545444444433
No 83
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=2.2e-21 Score=183.24 Aligned_cols=293 Identities=13% Similarity=0.154 Sum_probs=197.0
Q ss_pred HHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh
Q 015847 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (399)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (399)
....+........++.+.+++|-++. ..|+.+...++..++.++.|+++|.+|||+.++.+.++..++.+.++
T Consensus 54 ~~~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 54 IAAYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 33444555566778899999988654 78999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccc
Q 015847 131 LSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (399)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f 210 (399)
-++|...++.+..+.|+|.|........++|..|.|.|+...++......+....+|.++..+.. ..+|||.|
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~ 199 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIF 199 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHH
Confidence 99999999999999999987776667779999999999888877776666666678888877765 45677666
Q ss_pred cCCcchhhHHHHHHHHHHHHHH--HHhcccCCCCCCCCCCccchhhhhhhh-------------------------hhhh
Q 015847 211 GKFPYFLPCLCISLFAFGVTIA--AFWLPETLHRHNDDDDSCDVSYDALES-------------------------ASAE 263 (399)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~ 263 (399)
++.++...+.++. .+..|++.+..+.++...++...++|. .++.
T Consensus 200 ---------~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~S 270 (599)
T PF06609_consen 200 ---------YIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKS 270 (599)
T ss_pred ---------HHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 4444433333222 233343322211111111111111111 0000
Q ss_pred h------------------hhcc--ccCCcccccccccc-hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccch
Q 015847 264 V------------------KEEE--GREATPKKSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (399)
Q Consensus 264 ~------------------~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 322 (399)
. .|.. .+.+.-..+++|++ .+...++..++....+++...++|...... ++-++
T Consensus 271 a~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~ 345 (599)
T PF06609_consen 271 AHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDP 345 (599)
T ss_pred ccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCC
Confidence 0 0211 23455667888884 455556666677667777777788766554 33333
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHHHhHHh
Q 015847 323 ---QMVGEVLAITGFSLLVFQLSLYPFLERILGPI-MVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 323 ---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~ 372 (399)
...++.....+++..++.. +.+.+.+++++. +.++++.+++.+++..+.
T Consensus 346 ~~~~~~~~~s~~~~fg~~~g~~-i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama 398 (599)
T PF06609_consen 346 ISITEIGWISSPVGFGSCAGAV-ILGLLFSKIRHIKWQLIFGSVLMTAFCGAMA 398 (599)
T ss_pred cccceeehhhhhHHHHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHHHHHHHH
Confidence 2467777788888888774 667777777654 444566666555544443
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=6.9e-22 Score=207.79 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=184.3
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHH---HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHH
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~ 159 (399)
.++..+++.+.+.++++++|+++||+|||+++.. ..+..++..+.....++++.++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888999999999999999999999999997633 22222222233334589999999999999999998886 9999
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccC
Q 015847 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (399)
.|++|+++|++++|+.+++.++|.++||+++|++.+ ..|| +..++..++..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-------SGNF---------VILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-------cccc---------HHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999987 3444 444445555555555556667765
Q ss_pred CCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccc
Q 015847 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (399)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (399)
++.....+...... ......++.+.+++.++...+..++..+....+..++|.|+.+. +|
T Consensus 198 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII---------------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LG 257 (1140)
T ss_pred CCCCCCCeeccchH---------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cC
Confidence 43222111100000 00011455677889999888888887777778888899998776 78
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHh
Q 015847 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (399)
Q Consensus 320 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (399)
.++.+.|.+++..+++.+++.. +.+++.++..+++.+..+.++.+++.+
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSF-LASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHH-HHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 8999999999999999999985 788888776666655555444444333
No 85
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=1.4e-21 Score=183.80 Aligned_cols=294 Identities=13% Similarity=0.101 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
.++.+....++.....+...+++|.+. +++|.+..+ .|++.+++.++..+++++.|+++||+|||++++++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 445555566666666677788888554 559999999 9999999999999999999999999999999988766
Q ss_pred HHHHHHHHHh---ccc-----hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 121 SVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 121 ~~~~~~~~~~---~~~-----~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
+.++...... ..+ .....++.+++.|.+.....+. ..+. |.. ++++++.+|......++|..++|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHHH
Confidence 6554433211 111 1111222233333332222222 2222 222 345677888888999999999999999
Q ss_pred hhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccC
Q 015847 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (399)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (399)
.+.+ .+| +.+++..++..++..+..+..+++++++.+++++.+. +++...
T Consensus 163 ~l~~--------~~~---------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 212 (420)
T PRK09528 163 ILFN--------INP---------QINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAVS 212 (420)
T ss_pred HHHh--------cCc---------hHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------cccccc
Confidence 9975 233 3444666666655555544443332221110000000 000001
Q ss_pred CcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015847 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (399)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (399)
.++.++.+|+|.++...+..+............+|.|..+.... .+.+..+.|.+.+...+...++. +..+++.||+
T Consensus 213 ~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~ 289 (420)
T PRK09528 213 LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFAT--PEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRI 289 (420)
T ss_pred HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 12334567788776655544444444444445566665543111 35567788999999888888887 4889999999
Q ss_pred cchhHHHHHHHHHHHHHhHHhHHHH
Q 015847 352 GPIMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
++|+.+..+.++..+...++.+.++
T Consensus 290 g~~~~~~~~~~l~~~~~~l~~~~~~ 314 (420)
T PRK09528 290 GAKNALLLAGTIMAVRIIGSGFATG 314 (420)
T ss_pred CcchhhHHHHHHHHHHHHHHHhccc
Confidence 9999988888887777766655443
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=1.9e-20 Score=177.72 Aligned_cols=158 Identities=17% Similarity=0.180 Sum_probs=134.1
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc-cCCchhhHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~~ 117 (399)
++.++.++...+...+..+...+.++ ++.+++|.+..+ .+++.+.+.....+..++.|+++|| +||||++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 35666677777777787777777766 556789999988 9999999998888889999999999 999999999
Q ss_pred HHHHHHHHHHHHhccchHHH-HHHHHHHHhhhccchhhH-HHHHhhhccch--hhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 118 GTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
+.+++.++.+.++++.+... ++++|+++|++.|...|. .+++.|.+|++ +|.+++++++.+.++|..+||.+++++
T Consensus 87 g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876444 558899999999988774 99999999877 457899999999999999999999999
Q ss_pred cCCCCCCCCcccccccc
Q 015847 194 AQPAEKYPNLFSSESLF 210 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f 210 (399)
.+ ..|||+.|
T Consensus 167 ~~-------~~gw~~~F 176 (489)
T PRK10207 167 AD-------KFGYSVTY 176 (489)
T ss_pred HH-------hhChHHHH
Confidence 98 45665554
No 87
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=1.6e-20 Score=175.79 Aligned_cols=281 Identities=12% Similarity=0.042 Sum_probs=189.8
Q ss_pred HHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC-chhhHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVV 123 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~ 123 (399)
+....++.+.......|.++ .+.+++|.+..+ +|++.+++.++..++++++|+++||+|| |+++.++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~ 80 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGA 80 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 45556666777777766665 556779999999 9999999999999999999999999965 778888888888
Q ss_pred HHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHH----h----hhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA----C----EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~----~----~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
++.....+.++++.+++.|++.|++.+...+. .++. . |......|.+.+| .+|.++||.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~ 154 (418)
T TIGR00889 81 LLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLD 154 (418)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhc
Confidence 88888888899999999999999976655442 3332 2 2233334444444 478888899988874
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (399)
. ...| .+++..++..++..+..+.+||+++.+++++. +.. +.....
T Consensus 155 ~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~~---------------~~~~~~ 200 (418)
T TIGR00889 155 I----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKM--SIK---------------VMLGLD 200 (418)
T ss_pred c----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCcccccc--CHH---------------HHhhhh
Confidence 3 1112 23455555555555555677876432211110 000 000112
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccC--ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015847 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG--GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (399)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (399)
.++.+|+|.++...+..++..........+++.|..+..... .-+++....+...+...+..+++. +..+++.||+|
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g 279 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFG 279 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence 335678888777766666655544455566666665420000 012345677999999999999998 48899999999
Q ss_pred chhHHHHHHHHHHHHHhHHhH
Q 015847 353 PIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~ 373 (399)
+|+.+..+.++..+...++..
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888777655544
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=3.2e-20 Score=168.72 Aligned_cols=166 Identities=13% Similarity=0.110 Sum_probs=141.5
Q ss_pred ccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHH
Q 015847 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (399)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (399)
........|++.+++|+++.+. .|.+.+++..++++..++.|+++||+|.|+++.++.+.+.+..++.++++++.
T Consensus 42 R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~ 116 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW 116 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667788999999998762 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 137 MAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 137 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
.+.+.|++.|++.|...+...++..++|+++|+++.++.+++..+|.++++++++++. .+|||+..
T Consensus 117 ~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~--------s~gWr~y~------ 182 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV--------TLGWISYS------ 182 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCchhHH------
Confidence 9999999999998887755999999999999999999999999999999999999944 46777543
Q ss_pred hhHHHHHHHHHHHHHHHHhcccCCC
Q 015847 217 LPCLCISLFAFGVTIAAFWLPETLH 241 (399)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (399)
...++......++++..+++|..++
T Consensus 183 ~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 183 TLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCch
Confidence 2334444444555666778884443
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.87 E-value=5.5e-20 Score=174.57 Aligned_cols=149 Identities=15% Similarity=0.236 Sum_probs=133.8
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHH-H--hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc-cCCchhhH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-D--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~ 116 (399)
+.++.+....++..+..+...+.+|.+.+ + +|.+..+ .+++.+.+.++..+++++.|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 44566777788888888888888886654 4 8999999 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchh---hhHHHHHHHHHHHHHHhHHHHhhhh
Q 015847 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~p~i~~~ 192 (399)
++.++.+++.++.+++++++.+++.|.+.|++.|...+. .++++|++|+++ |++++++.+.+.++|..+||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999989989999999999999887775 899999998754 8889999999999999999999999
Q ss_pred hcC
Q 015847 193 LAQ 195 (399)
Q Consensus 193 l~~ 195 (399)
+.+
T Consensus 164 l~~ 166 (475)
T TIGR00924 164 IAE 166 (475)
T ss_pred HHH
Confidence 987
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=1.6e-20 Score=177.58 Aligned_cols=278 Identities=15% Similarity=0.124 Sum_probs=189.9
Q ss_pred ccchhhhH-HHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc----cCCch-hhHHHHHHHHHHHHHHh
Q 015847 57 ISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTLFG 130 (399)
Q Consensus 57 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~ 130 (399)
.....+++ +++.+++|+++.+ .|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 34444444 4666789999999 9999999999999999999999998 67755 56677788887777776
Q ss_pred ccch------HHHHHHHHHHHhhhccchhh-HHHHHhhhc-cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCC
Q 015847 131 LSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (399)
Q Consensus 131 ~~~~------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~ 202 (399)
..++ ...+++.+++.+++.+...+ ..++..|.. ++++|++..+..+.+..+|..+++.+.+.+....++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~ 168 (437)
T TIGR00792 89 TTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDD 168 (437)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6543 45667777888888776554 588888887 478999999999999999988887776666531110000
Q ss_pred cccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccccc
Q 015847 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (399)
Q Consensus 203 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (399)
.++|+..+.+.+++.++..+. .+..||++++.+++++++ .+..+..+.++++
T Consensus 169 ---------~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~------------------~~~~~~~~~l~~~ 221 (437)
T TIGR00792 169 ---------KFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKK------------------LSLKQIFKALFKN 221 (437)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccC------------------CCHHHHHHHHhCC
Confidence 334565557776666654433 455666542211110000 0011134567889
Q ss_pred chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015847 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (399)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (399)
|.++...+..++..........+.+.|.+.. .+ ++.+.+.+.....++.+++. ++.+++.||+|+|+.+..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~~~~ 294 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFAGGI 294 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHH
Confidence 9988877777766666555555555444332 34 45566777777788888887 48899999999999998888
Q ss_pred HHHHHHHhHHhHH
Q 015847 362 VLTIPLLTSYPYI 374 (399)
Q Consensus 362 ~~~~~~~~~~~~~ 374 (399)
.+.+++.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~ 307 (437)
T TIGR00792 295 LLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHHc
Confidence 8777776665543
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.87 E-value=2e-19 Score=167.52 Aligned_cols=274 Identities=12% Similarity=0.052 Sum_probs=192.2
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHH--HHHHHHHHHhhhhcc-cccccccCCchhhHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFW-GLVADRYGRKPVIIMGT 119 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-G~l~dr~Grr~~l~~~~ 119 (399)
+..+...++.+++..+...|.+|.+.++.|.+..+ +|+. .+.+.+...+.+|++ ++..||+||||..++..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 44566778889999999999999999999999999 9997 467788888888888 45799999999876665
Q ss_pred HHH-HHHHHHHh---ccch-HHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 120 ~~~-~~~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
.+. ++.....+ ...+ ...++....+.++..+...+. .++..|..++++++...+....+..+|..+|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 21222222 2222 223333444444555555554 77888888888888888888888899999999999899
Q ss_pred cCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCc
Q 015847 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (399)
.+ .+| |+.++++.++..++..+..++++|++++++++++ + ...
T Consensus 157 ~~-------~~g---------w~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~ 199 (390)
T TIGR02718 157 FG-------KFG---------QRPAFLLVACVPLASLVCVLWLKDRAVASPEAPL--A-------------------RRA 199 (390)
T ss_pred HH-------HhC---------HHHHHHHHHHHHHHHHHHHHHcCCCCcCccccch--h-------------------hHH
Confidence 87 444 4555577777766655555555543321111000 0 011
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
+.++.+|+|.++......++..........+.+.|+.+ .|+++++.|.+....+....+.+.+..+++.||+++
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34567888888877777777777777777788877765 689999999998888764444433588999999999
Q ss_pred hhHHHHHHHHHH
Q 015847 354 IMVARIAGVLTI 365 (399)
Q Consensus 354 ~~~~~~~~~~~~ 365 (399)
++.+..+..+.+
T Consensus 274 ~~~l~~~~~~~~ 285 (390)
T TIGR02718 274 WRTFILGVGLAG 285 (390)
T ss_pred HHHHHHHHHHHH
Confidence 998887766553
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.85 E-value=1e-18 Score=151.50 Aligned_cols=268 Identities=16% Similarity=0.121 Sum_probs=218.1
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
....+.|.++.+.+++|+|.+. .|++++...++..+.+++..++++|+|.++.+..++++.+++.++-... +.
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cH
Confidence 4567889999999999999999 9999999999999999999999999999999999999999999988777 77
Q ss_pred HHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
..++.+-.+.|.+.+...+. ++++.+.|| |+-+..+|++.+...+|+.+++.+.-.+.++ ..|||...
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~------~~gW~~aL---- 168 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQH------SGGWRGAL---- 168 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHh------hccHHHHH----
Confidence 88888999999999999886 999999998 5568999999999999999999999999872 12455443
Q ss_pred chhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHH
Q 015847 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
..-++++++.++.++ |...+++....+ ....+...++|+|.-|...+.+.+.
T Consensus 169 -----~~WAl~allAl~~Wl--Pq~~r~~~~~~~---------------------~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 169 -----GFWALLALLALLIWL--PQALREQAASIA---------------------TKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred -----HHHHHHHHHHHHHHh--hhcccccccccc---------------------cccccccccccCchhHHHHHHHHhh
Confidence 555566665555544 443221111100 0112345689999999999999999
Q ss_pred HhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHHhHHhH
Q 015847 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
++..+....++|.++.+ .|+|+.++|.+.+...+.....++ ..+++.+|. ++|+.......++.++...+.+
T Consensus 221 S~~~Y~~~~WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~ 293 (395)
T COG2807 221 SLLYYIVIGWLPAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVGLVGLLL 293 (395)
T ss_pred HHHHHHHHHHHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 699999999999999999999995 888888864 5666667777777777777665
Q ss_pred HHH
Q 015847 374 IAM 376 (399)
Q Consensus 374 ~~~ 376 (399)
.+.
T Consensus 294 ~P~ 296 (395)
T COG2807 294 APG 296 (395)
T ss_pred hhh
Confidence 554
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=1.1e-19 Score=175.57 Aligned_cols=277 Identities=17% Similarity=0.136 Sum_probs=188.4
Q ss_pred HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhh
Q 015847 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (399)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 147 (399)
.+.++.+... ..+..+++.+|..+|++++|+++||+|||++++.+.++..++.++.++++|++.+++.|++.|+
T Consensus 110 ~~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 110 WNLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred hceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 3555666666 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHH
Q 015847 148 LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 226 (399)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~ 226 (399)
+.+.... ...+++|++++++|+.+..+ ......++.++|..++++.. +||+.+ ++..++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---------~Wr~~~---------~~~~~~~ 244 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---------DWRWLF---------WIISIPS 244 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---------hHHHHH---------HHHHHHH
Confidence 8666555 59999999999999999999 77778888888888888864 455444 7777777
Q ss_pred HHHHHHHHhcccCCCCCCCCCCccchh--hhhhhh------h----hhhh---hhc---cccCCcccccccccchhHHHH
Q 015847 227 FGVTIAAFWLPETLHRHNDDDDSCDVS--YDALES------A----SAEV---KEE---EGREATPKKSLLKNWPLMSSI 288 (399)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~------~----~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (399)
++.++..+..||++++...+.+.++.. .++..+ . .+.. +++ ..+.......+++.|++....
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence 766666666779998765444332211 111100 0 0000 000 011223456677777654444
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 015847 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (399)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (399)
+...+..+.......-++..... +|.+. .......+....... ...+...++.|||.....+..+..+++
T Consensus 325 ~~~~~~~~~~~~~y~gl~~~~~~------lg~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~ 394 (521)
T KOG0255|consen 325 LYLLFIWFVFSLVYYGLSLNVSG------LGGNI---YLNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGL 394 (521)
T ss_pred HHHHHHHHHHhHHHHhhhhhhhh------cCchH---HHHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 43333332222221111211111 33232 233333333444444 366788899999999999999999999
Q ss_pred hHHhHHHHHHH
Q 015847 369 TSYPYIAMLSG 379 (399)
Q Consensus 369 ~~~~~~~~~~~ 379 (399)
+...+......
T Consensus 395 ~~~~~~~~~~~ 405 (521)
T KOG0255|consen 395 LLFGWLPDDLG 405 (521)
T ss_pred HHHHHhhccch
Confidence 88887765443
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1e-18 Score=150.97 Aligned_cols=186 Identities=20% Similarity=0.168 Sum_probs=153.3
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+..............+......-+.|...+..|.+..+ ..++......+..+++..+|..+|++|||+.+.+..
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 34444445555555555555666667788888988888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
...++..++.+.++|+..+++.|.+.|+|.|......++-.|..|..+|...+-.. ..+.+|.++...++-....
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~---- 225 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS---- 225 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999999887433588889999999998877766 9999999999999988887
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCC
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDD 248 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 248 (399)
.+|||+.+ +....+..+.....+++||+++....+.+
T Consensus 226 ---~~gwr~~l---------~~~~~pl~~~a~f~~w~~ESpRf~~~~G~ 262 (528)
T KOG0253|consen 226 ---NFGWRYLL---------FTSSTPLMFAARFLVWVYESPRFYLAKGD 262 (528)
T ss_pred ---hhhHHHHH---------HHHHhHHHHHHHHHhhcccCcchhhhcCC
Confidence 56776655 66666666777778899999987654433
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.82 E-value=2.9e-23 Score=197.13 Aligned_cols=306 Identities=18% Similarity=0.246 Sum_probs=192.6
Q ss_pred HHHHhhccccchhhhHHHHH--HHhccCccccc---hhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 123 (399)
+.+..+++........+... .+++.+..... .....++..+...++..+|++++|.++||+|||+.+.++.++..
T Consensus 8 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~ 87 (451)
T PF00083_consen 8 GGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMI 87 (451)
T ss_pred HHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 34555665555555544333 22333322211 22347899999999999999999999999999999999999999
Q ss_pred HHHHHHhccc---hHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCC
Q 015847 124 IFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (399)
Q Consensus 124 ~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~ 199 (399)
++.++.++++ +++.+.++|++.|++.|...+ ...++.|..|+++|++..++.+....+|..++..++..+...
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~--- 164 (451)
T PF00083_consen 88 IGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY--- 164 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence 9999999999 999999999999999888776 599999999999999999999999999999888887655431
Q ss_pred CCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchh--hhhhh---hhhhhhhhc----cc-
Q 015847 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALE---SASAEVKEE----EG- 269 (399)
Q Consensus 200 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~----~~- 269 (399)
.+ .+.||..+...++++++..+...++||+|++...+++.++.. .++.+ ..+++.++. ++
T Consensus 165 ----~~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~ 234 (451)
T PF00083_consen 165 ----SD------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKES 234 (451)
T ss_pred ----cc------cccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccc
Confidence 11 123444447777777777777788999998865444332221 11111 001111110 00
Q ss_pred -cCCcccccccccchh-HHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 -REATPKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (399)
Q Consensus 270 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l 347 (399)
+....++++++++.. +.......+..............|.. ...+..+.+.. -......++...++. +++.++
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~--~i~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~ 309 (451)
T PF00083_consen 235 QESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSP--SIFENAGISNS--FLATLILGLVNFLGT-LLAIFL 309 (451)
T ss_pred cccceeeeecccccccccccccccccccccccccccccccccc--ccccccccccc--ccccccccccccccc-cccccc
Confidence 111345666666442 12222222222221111111111111 11122455554 112222334444444 356689
Q ss_pred HHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 348 ERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
.||+|||+.+..+.....++...+.
T Consensus 310 ~~~~GRr~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 310 IDRFGRRKLLIIGLLLMAICSLILG 334 (451)
T ss_pred ccccccccccccccccccccccccc
Confidence 9999999999888888777766653
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.81 E-value=1.8e-17 Score=154.60 Aligned_cols=315 Identities=17% Similarity=0.170 Sum_probs=198.1
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc----ccCCchh
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~ 114 (399)
|.++++.++...+...+......+.++.+.+++|.+... .+++..+..+...+.+|+.|+++| |+||||+
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 345667777777777788888889999899999999988 999999999999999999999999 5999999
Q ss_pred hHHH-HHHHHHHHHHHhccchHH-----------------HHHHHHHHHhhhccch-hhHHHHHhhhccchhh--hHHHH
Q 015847 115 IIMG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLNGLL-GPIKAYACEIFREEHQ--ALGLS 173 (399)
Q Consensus 115 l~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~r--~~~~~ 173 (399)
++++ ....+++.++++++++.+ ..+++-.+..++.... .|..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8875 666666767777766542 2222333344455544 4469999999998865 57899
Q ss_pred HHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccc--cc--cCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCC
Q 015847 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES--LF--GKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDD 248 (399)
Q Consensus 174 ~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~--~f--~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~ 248 (399)
+.+.+.++|..+|+.++++..... .+++.. .. -..+.+..|.+.++..++.. +..+..||.+...+++.+
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~ 230 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch
Confidence 999999999999999998752100 111100 00 01245666677776666544 445667886643221110
Q ss_pred ccchhhhhhhhhhhhhhhccccCCcccccccc-----cchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccch-
Q 015847 249 SCDVSYDALESASAEVKEEEGREATPKKSLLK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST- 322 (399)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 322 (399)
+++ .++.. +.......+++++ .+.++..++..++..+..+.+..+.+.|..+......-+-+.
T Consensus 231 ~~~-----~~~~~------~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~ 299 (477)
T TIGR01301 231 NSE-----AAPPS------KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAK 299 (477)
T ss_pred hhh-----ccccc------ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhH
Confidence 000 00000 0000011122222 256677788888877777777666665544321111000000
Q ss_pred -hh---HH-HHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHhHHhHHHH
Q 015847 323 -QM---VG-EVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 323 -~~---~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
++ .| +....+++...+.+ ++..++.+++|+ |+....+.++.++++....+.+.
T Consensus 300 y~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~ 358 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTY 358 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 11 12 23444455555666 367888999985 66668888888888887776554
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=2.5e-20 Score=165.57 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=197.2
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHh-ccCccc-cchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKRE-EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
.....+.+.+.++...++.+.|-+...| |.++.. ..-+...+.+..+..+|.++||+++|+++||+|||+++...+++
T Consensus 44 ~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liI 123 (538)
T KOG0252|consen 44 IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELII 123 (538)
T ss_pred HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHH
Confidence 3455677888888888888888776543 333211 11122278999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc-------hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 122 VVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 122 ~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
..+++++++++. -++++...|++.|+|.|.-.|. .+..+|...++.||...+..-+..+.|...|.+++-.+
T Consensus 124 mIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 124 MIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred HHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 999998887742 2578889999999999998886 88899999999999999988777777777666666544
Q ss_pred cCCCCCCCCcccccccc--cCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCcc----chhhhhhhhh--hhhhh
Q 015847 194 AQPAEKYPNLFSSESLF--GKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSC----DVSYDALESA--SAEVK 265 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----~~~~~~~~~~--~~~~~ 265 (399)
..-... .++-+... -+.-||+.+.+.+++++..+...+.+||+++......++. ++..+.+... .++..
T Consensus 204 ~~~fe~---~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~ 280 (538)
T KOG0252|consen 204 SAIFEK---IFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTA 280 (538)
T ss_pred HHHHhc---cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcc
Confidence 321000 11111000 0223677668888888888888888999987652111110 0000000000 00000
Q ss_pred hccccCCcc----cccccccc---hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHH--------HHH
Q 015847 266 EEEGREATP----KKSLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE--------VLA 330 (399)
Q Consensus 266 ~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~ 330 (399)
+...+.+.. +...+..+ .++.....+++.-...+....+....+.. .|+.+..... ...
T Consensus 281 ~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~------ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 281 ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA------IGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh------hccCCCcchHHHHHHHHHHHH
Confidence 111111111 11222222 23334445555544444444443333332 3444433332 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHH
Q 015847 331 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 331 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
+...+..+-...+...+.|++||+++...+++++.+..+.++...
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y 399 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY 399 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc
Confidence 222222221223455678999999999999999998888776543
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.80 E-value=2.1e-17 Score=156.46 Aligned_cols=269 Identities=17% Similarity=0.070 Sum_probs=168.3
Q ss_pred ccchhhhH-HHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc----cCCch-hhHHHHHHHHHHHHHHh
Q 015847 57 ISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTLFG 130 (399)
Q Consensus 57 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~ 130 (399)
......++ .++.+++|++..+ +|.+.++..+...+..|+.|.++|| +|||| .++.+.+..+++.++..
T Consensus 25 ~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f 98 (444)
T PRK09669 25 WQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF 98 (444)
T ss_pred HHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 33344444 4667889999999 9999999999999999999999998 78754 45567677766665544
Q ss_pred ccch------HHHHHHHHHHHhhhccch-hhHHHHHhhhc-cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCC
Q 015847 131 LSVN------FWMAVLTRFLLGSLNGLL-GPIKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (399)
Q Consensus 131 ~~~~------~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~ 202 (399)
..++ .+.+++..++.+.+.... .|..++.+|+. ++++|.+..+.......+|..+++.+...+...
T Consensus 99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~------ 172 (444)
T PRK09669 99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI------ 172 (444)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 4432 455556666667654444 44588999988 568899988888888888888887766555431
Q ss_pred cccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCccccccccc
Q 015847 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (399)
Q Consensus 203 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (399)
++.+. . +.+|+..+.+.++++++..+. .+..+|..++++++ + .+..+..+..+||
T Consensus 173 -~~~~~-~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~-~--------------------~~~~~~~~~~~~n 228 (444)
T PRK09669 173 -LGKGD-E-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDN-S--------------------SSVWKDLKLLLGN 228 (444)
T ss_pred -hCCCc-h-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcC-C--------------------CCHHHHHHHHhCC
Confidence 11100 0 234555555555555444333 34445532221100 0 0011245667899
Q ss_pred chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015847 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (399)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (399)
|+++...+..++............++|.... .+ ++...+.+.....+..+++. ++.+++.||+|+|+....+.
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~~~~~~ 301 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYV-----LL-RPDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRAFKWTI 301 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeee-----cC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHH
Confidence 9988877776665555544444333333222 22 23333444554455666665 57889999999999988777
Q ss_pred HHHHHHH
Q 015847 362 VLTIPLL 368 (399)
Q Consensus 362 ~~~~~~~ 368 (399)
+...+..
T Consensus 302 ~~~~~~~ 308 (444)
T PRK09669 302 VAFVILS 308 (444)
T ss_pred HHHHHHH
Confidence 6555433
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.80 E-value=4.7e-17 Score=155.50 Aligned_cols=157 Identities=17% Similarity=0.190 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc-cCCchhhHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~ 118 (399)
+.++.++...+...+..+...+.++ ++.+++|.+..+ .+++.+.+........++.|+++|| +|||+.+..+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 3456666677777777777777776 445889999988 8888877776666667789999999 5999999999
Q ss_pred HHHHHHHHHHHhccc-hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchh--hhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.++.+++.+++++++ +.+.+++.|+++|++.|...+. .+++.|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888864 5666778899999998887775 889999998643 456888889999999999999999998
Q ss_pred CCCCCCCCcccccccc
Q 015847 195 QPAEKYPNLFSSESLF 210 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f 210 (399)
+ .+|||+.|
T Consensus 175 ~-------~~g~~~~F 183 (500)
T PRK09584 175 A-------KYGWSVAF 183 (500)
T ss_pred H-------hhCHHHHH
Confidence 8 45555554
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.79 E-value=1.8e-17 Score=156.14 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=201.7
Q ss_pred HHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc----ccCCchhh-HHHHHHHHHHHHHHhcc-c----
Q 015847 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVI-IMGTASVVIFNTLFGLS-V---- 133 (399)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~-~---- 133 (399)
.+++.+.+|+++.. .|.+..+..+..++..|+.|.++| |+||||.. ++|.+..+++.+++... +
T Consensus 25 ~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~ 98 (428)
T PF13347_consen 25 LYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS 98 (428)
T ss_pred HHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh
Confidence 45666778999988 999999999999999999999999 89977654 56778888887777765 3
Q ss_pred ---hHHHHHHHHHHHhhhccchhh-HHHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccc
Q 015847 134 ---NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (399)
Q Consensus 134 ---~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~ 208 (399)
....+.+..++..++...... ..++..|..+ +++|.+..+....+..+|..+...+.+.+.+..+ ...
T Consensus 99 ~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g-------~~~ 171 (428)
T PF13347_consen 99 FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFG-------GGD 171 (428)
T ss_pred hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhc-------cCc
Confidence 223346666667777666555 5999999998 5799999999999999998877777777765221 110
Q ss_pred cccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHH
Q 015847 209 LFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (399)
Q Consensus 209 ~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (399)
. ..+|+....+.+++.++..+ ..+..||..++.+++++ +.+..+..+++++||+++..
T Consensus 172 ~--~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~l 230 (428)
T PF13347_consen 172 T--SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRIL 230 (428)
T ss_pred c--chHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHHH
Confidence 0 01455555666666655443 45556772211111111 11223457788999999998
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 015847 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (399)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (399)
....++............+.|.+.. .|.+ ...+.+.....++.+++. ++.+++.||+|+|+.+..+..+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHH
Confidence 8888888787777777777777665 4434 456667777777777777 58899999999999999999999998
Q ss_pred HhHHhHHHHHHHHHHHHHHHHHHh
Q 015847 368 LTSYPYIAMLSGFGLAFLLNCASV 391 (399)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
.+.+.+.+..............++
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi 327 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGI 327 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHh
Confidence 888777763333333334344433
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=4.4e-17 Score=155.23 Aligned_cols=286 Identities=12% Similarity=0.093 Sum_probs=178.9
Q ss_pred HHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc----ccCC-chhhHHHHHH
Q 015847 48 IIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPVIIMGTAS 121 (399)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~ 121 (399)
++.+...+......++++ ++.+.+|++... +|.+..+.-+..++..|+.|.++| |+|| |+.++++.+.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~ 86 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLA 86 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHH
Confidence 344444555555666665 555667999999 999999999999999999999999 6698 5566667777
Q ss_pred HHHHHHHHhccch------HHHHHHHHHHHhhhccchhh-HHHHHhhhc-cchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 122 VVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 122 ~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
.+++.+++...++ +..+++..++.+++.....+ ..++..|.. ++++|.+..+......++|+.+.+.+...+
T Consensus 87 ~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 87 NSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777655544321 33445555666776666554 588999998 589999999987777788777666655544
Q ss_pred cCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCC
Q 015847 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (399)
.+. +|.... ..+|+....+.+++.++.. ...+..||.++....+.++++ +.+..
T Consensus 167 ~~~-------~g~~~~--~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----------------~~~~~ 221 (473)
T PRK10429 167 VNY-------VGGGDR--GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS----------------HLTLK 221 (473)
T ss_pred HHH-------hCCCch--hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc----------------CCCHH
Confidence 321 110000 1234444444444444433 333446665322111100000 00011
Q ss_pred cccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015847 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (399)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (399)
...+.+++||.++..+...++..........+.+.|.... .+ ++...+.+....+++.+++. ++.+++.||+|
T Consensus 222 ~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g 294 (473)
T PRK10429 222 DIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLS 294 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 1334567888888877777777666655555555443332 22 45556667777677787877 47899999999
Q ss_pred chhHHHHHHHHHHHHHhHH
Q 015847 353 PIMVARIAGVLTIPLLTSY 371 (399)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ 371 (399)
+|+.+..+..+.+++.+.+
T Consensus 295 kk~~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 295 RRILWAGASIFPVLSCGVL 313 (473)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999887777655554443
No 102
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.77 E-value=1.2e-16 Score=146.52 Aligned_cols=200 Identities=17% Similarity=0.231 Sum_probs=160.7
Q ss_pred CCCChhHHHHHHHHHHHhhccccchhhhHHHHHHH--hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC-c
Q 015847 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-K 112 (399)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r 112 (399)
++.+|+.++...+..++.....+.+.+..-.+.++ .+.+.+. .|++.++..++.+++++++|+++.|.++ |
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~~~k 102 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTGSVK 102 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccCCcc
Confidence 45678888999999999999999988888777777 5555566 9999999999999999999999999997 8
Q ss_pred hhhHHHHHHHHHHHHHH-hc---cc-hHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHH
Q 015847 113 PVIIMGTASVVIFNTLF-GL---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (399)
Q Consensus 113 ~~l~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 187 (399)
++++.|.++.++++++. ++ .+ ..+.++++|++.|+|.|......+|+++....++|.++++....+..+|..+||
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp 182 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGP 182 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhH
Confidence 99999999999999988 33 23 678899999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCCCCCCCccccccc--ccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCC
Q 015847 188 ALGGFLAQPAEKYPNLFSSESL--FGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDD 246 (399)
Q Consensus 188 ~i~~~l~~~~~~~~~~~gw~~~--f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~ 246 (399)
.++..+.... .-|++.. .-.+-+..+.++++++.++.++. .++++|..+...++
T Consensus 183 ~~q~~f~~Lg-----~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~ 239 (488)
T KOG2325|consen 183 TIQLAFTPLG-----EKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDK 239 (488)
T ss_pred HHHHHHhhhc-----CCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccc
Confidence 9887776522 1222221 10234667778888888775544 56677776554333
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=1.8e-16 Score=146.12 Aligned_cols=283 Identities=17% Similarity=0.254 Sum_probs=206.5
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC-CchhhHHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVVI 124 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~ 124 (399)
+....++.....+...|.++.+.++.|.|..| +|.+.+...+..+++++++|.++||.+ +||.+.+..++.++
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 45556666777778889999999999999999 999999999999999999999999986 57888787777777
Q ss_pred HHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh-hhhcCCCCCCCC
Q 015847 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYPN 202 (399)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~-~~l~~~~~~~~~ 202 (399)
........++++.+++..++..+......|. .++..+... ++++-.|-.....++|.+++.... +.+...
T Consensus 81 ~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~------ 152 (400)
T PF03825_consen 81 ALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY------ 152 (400)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh------
Confidence 7777777888988888877777776666664 666666664 445667777777788887775542 333321
Q ss_pred cccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccc
Q 015847 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (399)
Q Consensus 203 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (399)
.++ ......+++.+...++.....+.+|+.+++++.+++.++ ....+..+++|+|
T Consensus 153 -~~~------~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~~ 207 (400)
T PF03825_consen 153 -LGI------SGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKNP 207 (400)
T ss_pred -hcc------ccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcCc
Confidence 111 111122344444444444445667877633222211111 1112335789999
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (399)
++....+..++.......+.++.+.|+++ .| .+....+.+++...+..++.. +..+++.+|+|.++++.++.
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~------~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQE------LGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHH
Confidence 99998888888888899999999999887 45 777888888888888888887 48899999999999999999
Q ss_pred HHHHHHHhHHhHH
Q 015847 362 VLTIPLLTSYPYI 374 (399)
Q Consensus 362 ~~~~~~~~~~~~~ 374 (399)
+..++=..+++..
T Consensus 281 ~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 281 VAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHh
Confidence 8888877777665
No 104
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=8.6e-17 Score=153.20 Aligned_cols=129 Identities=13% Similarity=0.160 Sum_probs=109.2
Q ss_pred cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc-----
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----- 132 (399)
+.++.+.+.+.+++|++..+ .+++.++. .....++++.|+++||+|||+++.++.+++.++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45566778899999999998 88888764 3445677789999999999999999999999999999987
Q ss_pred -chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhH-HHHhhhhhc
Q 015847 133 -VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLA 194 (399)
Q Consensus 133 -~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~i~~~l~ 194 (399)
++++.+++.|++.|++.+...+ +...+.+++| ++||++.|+...+.++|.++ +++..+++.
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999887766 4778889986 78999999999999999975 555555554
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.75 E-value=9.4e-16 Score=143.80 Aligned_cols=149 Identities=16% Similarity=0.262 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-CCchhhHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMG 118 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~ 118 (399)
+.+..++...+...+..+.....+|.+ .+++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||+++++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 456666666677777777777788755 5678999998 99999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHhccc-hHHHHHHHHHHHhhhccchhh-HHHHHhhhccch--hhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.++..++.++++..+ +...+.+...+.+++.|...+ ..++++|.+|++ +|.+++++.....++|+.++|.+.+++.
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887776543 223344444455566666666 488999999875 7999999999999999999999999998
Q ss_pred C
Q 015847 195 Q 195 (399)
Q Consensus 195 ~ 195 (399)
+
T Consensus 163 ~ 163 (493)
T PRK15462 163 E 163 (493)
T ss_pred h
Confidence 7
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=1.3e-15 Score=144.39 Aligned_cols=286 Identities=17% Similarity=0.126 Sum_probs=170.5
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc----CCchh
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRKPV 114 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~----Grr~~ 114 (399)
+++.+.-.++.+..........++++ ++.+.+|++..+ +|.+.+...+..++..++.|+++||. ||||.
T Consensus 7 ~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~ 80 (448)
T PRK09848 7 WRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRP 80 (448)
T ss_pred HHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchH
Confidence 33433333344444444445555554 566678999999 99999999999999999999999996 77765
Q ss_pred h-HHHHHHHHHHHHHH-hc----cch--HHHHHHHHHHHhhhccchhh-HHHHHhhhcc-chhhhHHHHHHHHHH-----
Q 015847 115 I-IMGTASVVIFNTLF-GL----SVN--FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAW----- 179 (399)
Q Consensus 115 l-~~~~~~~~~~~~~~-~~----~~~--~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~----- 179 (399)
. ..+.+...+..++. .. .++ .+..++...+.+++.+...+ ..++..|..+ +++|.+..+.-..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~ 160 (448)
T PRK09848 81 FLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV 160 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5 55555444433332 21 112 22334445666777666655 4666676664 577888766655433
Q ss_pred HHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCCCCCCCCCCccchhhhhhh
Q 015847 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALE 258 (399)
Q Consensus 180 ~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 258 (399)
.++..++|.+++...+. . ...|.....+.++++++. ++.....||+.+++.++.
T Consensus 161 ~~~~~~~p~i~~~~g~~-------~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~----------- 215 (448)
T PRK09848 161 CLAFLIGPSIKNSSPEE-------M-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP----------- 215 (448)
T ss_pred HHHHHHHHHHHHhCCCc-------h-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC-----------
Confidence 35555666666543210 0 001111112222222222 222333455432211100
Q ss_pred hhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHH
Q 015847 259 SASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLV 338 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 338 (399)
......+.+++||.++...+..++............+.|.++. +|.++...+.......++.++
T Consensus 216 -----------~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~ 279 (448)
T PRK09848 216 -----------SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGTVA 279 (448)
T ss_pred -----------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHHHH
Confidence 0111355688999998888887777777677766667666655 666665555444444555666
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhH
Q 015847 339 FQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (399)
Q Consensus 339 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (399)
+. ++.+++.||+++|+.+.++.++.+++.+.+.+
T Consensus 280 ~~-~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~ 313 (448)
T PRK09848 280 SA-PLVPGMVARIGKKNTFLIGALLGTCGYLLFFW 313 (448)
T ss_pred HH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 66 57889999999999999998887777666554
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=4.6e-16 Score=140.96 Aligned_cols=295 Identities=16% Similarity=0.165 Sum_probs=180.5
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+..+......+...+..+...|+.+.+.+ +.|++.++ +|.+.++..+...+.+|+.|.++||.|.||-++...
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 45666666777777778888999997776 48999999 999999999999999999999999999776655443
Q ss_pred HHH--HHHHH-HHhcc----chHH-HHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 120 ASV--VIFNT-LFGLS----VNFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 120 ~~~--~~~~~-~~~~~----~~~~-~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
... ..+.+ ...+. .|.+ ..+++-+..|+......|. -+++.+.. ++.+.-.|-.....++|.+++..++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 322 22222 22222 2222 1222222223322222332 33433332 3445567778888999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcc-cCCCCCCCCCCccchhhhhhhhhhhhhhhccc
Q 015847 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP-ETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (399)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
|.+.+ . +....+++..+.+++..+..+..+ +.+++.+.++...++. ++
T Consensus 159 G~L~~----------------i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~ 207 (412)
T PF01306_consen 159 GILFN----------------I-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DK 207 (412)
T ss_dssp HHHHH----------------H-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------------------
T ss_pred heeee----------------e-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CC
Confidence 99985 1 122333444444444444333333 3222211111100000 00
Q ss_pred cCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (399)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
...++..+++|+|++|...+........+..+...++.|....... .+.+....|++.+...+..++.. .+.+++.+
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~--~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~ 284 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS--AGQGNQMYGYLWSVQVFLEALMM-FFSPWLIN 284 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccChhHHhHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1112456789999999988877766666667666666666543221 45567789999999889998887 58999999
Q ss_pred HhcchhHHHHHHHHHHHHHhHHhHHHHH
Q 015847 350 ILGPIMVARIAGVLTIPLLTSYPYIAML 377 (399)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (399)
|+|.|+.++++..+..+=....++.++.
T Consensus 285 rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 285 RIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred hcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 9999999999988888877776655543
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.72 E-value=2.4e-15 Score=137.65 Aligned_cols=318 Identities=18% Similarity=0.149 Sum_probs=218.1
Q ss_pred CChhHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc----cCCc
Q 015847 38 LPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK 112 (399)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr----~Grr 112 (399)
.+.++...-....+...........++. ++.+.+|++... +|.+..+.-+--++..|+.|.++|| +||+
T Consensus 9 Ls~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Grf 82 (467)
T COG2211 9 LSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGRF 82 (467)
T ss_pred ccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeecccccccccc
Confidence 4445555445555556566666666666 555778999998 9999999999999999999999995 7875
Q ss_pred -hhhHHHHHHHHHHHHHHhccch------HHHHHHHHHHHhhhccch-hhHHHHHhhhcc-chhhhHHHHHHHHHHHHHH
Q 015847 113 -PVIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLL-GPIKAYACEIFR-EEHQALGLSTVSTAWGIGL 183 (399)
Q Consensus 113 -~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~ 183 (399)
+.++.+.+..++.+.++..+++ ....++...+.+++.... .|-.++.+|..+ ++||.+..+.-+.+.++|.
T Consensus 83 RP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~ 162 (467)
T COG2211 83 RPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGG 162 (467)
T ss_pred cHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 4566677888888888877663 444566678888886654 456888899886 7899999999999999998
Q ss_pred hHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhh
Q 015847 184 IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASA 262 (399)
Q Consensus 184 ~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (399)
.+...+...+....++-.. ..+|+....+.++++++.. .+++..+|+..+....++..+
T Consensus 163 ~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~----------- 222 (467)
T COG2211 163 LLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK----------- 222 (467)
T ss_pred HHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc-----------
Confidence 7777666666652221111 2345555566666655544 345556776653322211000
Q ss_pred hhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHH
Q 015847 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (399)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 342 (399)
.+........++||+++..++...+.........+...+|.+.. +|.+.......+.....+.+++. +
T Consensus 223 ------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~-~ 290 (467)
T COG2211 223 ------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGL-I 290 (467)
T ss_pred ------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHH-H
Confidence 01112334678999999888888887777777777777777666 67777777777666666666655 5
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhhh
Q 015847 343 LYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (399)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
+.+++.+|+|+|++..++.++..++.+.+.+.+........+...+..+..
T Consensus 291 ~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 291 LWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGT 341 (467)
T ss_pred hHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHh
Confidence 889999999999999999999999988887776333333333333333333
No 109
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=4.5e-15 Score=140.57 Aligned_cols=274 Identities=14% Similarity=0.048 Sum_probs=171.2
Q ss_pred HHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc----cCCchhh-HHHHHHH
Q 015847 49 IVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVI-IMGTASV 122 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr----~Grr~~l-~~~~~~~ 122 (399)
+.+...........++. ++.+..|++... +|.+..+.-+--++..|+.|.++|| +||||+. +++.+..
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~ 90 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPF 90 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHH
Confidence 33333444444454444 556778999998 9999999999999999999999995 7886554 5566777
Q ss_pred HHHHHHHhccch------HHHHHHHHHHHhhhccchh-hHHHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 123 VIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLG-PIKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 123 ~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
+++.+++...++ ...+.+...+..++..... |-.++.+|..+ ++||.+..+....+..+|..+++.+...+.
T Consensus 91 ~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 91 GIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766654442 3345555566677755544 45889999987 799999999999999999888887776655
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCc
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (399)
+. +|-+.. ..+|.....+.++++++.... ....+|.++.++++ . +...
T Consensus 171 ~~-------~g~~~~--~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~----~------------------~~~~ 219 (460)
T PRK11462 171 NL-------IGGDNK--PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTT----T------------------SMRE 219 (460)
T ss_pred HH-------hCCCch--hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccC----C------------------CHHH
Confidence 42 110000 123444445555554444333 33345532211100 0 0111
Q ss_pred ccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
..+..++|+.++......++..............|.... .| ++...+.++....++.+++. ++.+++.||+++
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g-~~~~~~~~l~~~~i~~iig~-~l~~~l~~r~gk 292 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LG-TPEVFVAFLTTYCVGNLIGS-ALAKPLTDWKCK 292 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCh
Confidence 345677888887766665555555444444444443332 23 23344556677777777777 588999999999
Q ss_pred hhHHHHHHHHHHH
Q 015847 354 IMVARIAGVLTIP 366 (399)
Q Consensus 354 ~~~~~~~~~~~~~ 366 (399)
|+....+..+..+
T Consensus 293 k~~~~~~~~~~~~ 305 (460)
T PRK11462 293 VTIFWWTNALLAV 305 (460)
T ss_pred HHHHHHHHHHHHH
Confidence 8887655444333
No 110
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.71 E-value=8.3e-19 Score=166.87 Aligned_cols=313 Identities=16% Similarity=0.211 Sum_probs=2.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+++..+......+.....+..++++|+++..+ .|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 445555566666677778889999999999999 99999999999999999999999998888999999999999
Q ss_pred HHHHHhccc--------------------------------------------------hHHHHHHHHHHHhhhccchhh
Q 015847 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (399)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~~~~~~ 154 (399)
+++++++-+ -+..++++.++.|+|.....+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 998877410 135677888999999999888
Q ss_pred H-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcc----c---ccccccCCcchhhHHHHHHHH
Q 015847 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF----S---SESLFGKFPYFLPCLCISLFA 226 (399)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~----g---w~~~f~~~~~~~~~~~~~~~~ 226 (399)
. .+|+-|..++++-+..+|+..+...+|.++|-++++.+.+..-.++..- + .+..| --.||..+++.+.+.
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 6 9999999999999999999999999999999999998876322221110 1 11112 335788888888888
Q ss_pred HHHHHHHHhcccCCCCCCCCCCccch---hhhhhhhhh--hhh-----hhccccCCcccccccccchhHHHHHHHHHHHh
Q 015847 227 FGVTIAAFWLPETLHRHNDDDDSCDV---SYDALESAS--AEV-----KEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (399)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~---~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
++..+..+.+|+..+...+.+++.+. ..++.++.. ++. .+..++.+...+++++||.+....+.......
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 88777777777765544111111110 000000000 000 11223445667889999999999999999999
Q ss_pred hhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHh
Q 015847 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLT 369 (399)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~ 369 (399)
...++.++.|.|+++. ++.++.+++.+.....+.....+.+++|++.+|++ .|+.+....+...++.+
T Consensus 320 ~~~G~~tF~pKylE~Q-----F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQ-----FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHH-----hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999887 99999999999888888666666679999999875 45555554444444433
No 111
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.71 E-value=3.5e-16 Score=148.27 Aligned_cols=298 Identities=13% Similarity=0.030 Sum_probs=187.0
Q ss_pred ChhHHHHHHHHHHHhhccccchhhh-HHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC-----Cc
Q 015847 39 PITELFSIWIIVLCTALPISSLFPF-LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RK 112 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G-----rr 112 (399)
+...+..+...++..++. ...... .+.+.+++|++..+ ++...+...+...+-.+ +|+++||++ ||
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr 95 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKR 95 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccch
Confidence 334555666677778887 544444 45666679999999 99999999999887555 999999998 77
Q ss_pred hhhHHHHHHH-HHHHHHHhccchHHHHH-HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHH---HHHHHHHHHhHH
Q 015847 113 PVIIMGTASV-VIFNTLFGLSVNFWMAV-LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLST---VSTAWGIGLIIG 186 (399)
Q Consensus 113 ~~l~~~~~~~-~~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~---~~~~~~~g~~~~ 186 (399)
+.++++.++. ++.....+..++..... +..++.+++.+...++ .++..|..+ +++....+. .....++|..+|
T Consensus 96 ~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg 174 (468)
T TIGR00788 96 WYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLIS 174 (468)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHH
Confidence 8888887766 34444444445544444 4778888888887774 999999998 555443333 333445899999
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhh
Q 015847 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (399)
Q Consensus 187 p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (399)
+.++|.+.+ .++|+ ..+.+.++..++..+...+++|+++....+.++.+..... .......+
T Consensus 175 ~~l~G~l~~-------~~~~~---------~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~~~~ 236 (468)
T TIGR00788 175 SLLGGPLLD-------KTLTR---------ILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMA--LLTLGVLA 236 (468)
T ss_pred HHHHHHHHH-------hcCcc---------hHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhh--hhhhhHHH
Confidence 999999987 44444 4446766666666555677788642111110000000000 00000000
Q ss_pred ccccCCcccccccccchhHHHHHHHHH-HHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015847 267 EEGREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (399)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 345 (399)
...+.....++.+++|.++...+..++ +....... .+.++. .....|+++.+.|......+++.+++.. ..+
T Consensus 237 ~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~---~~~f~~---~~~~lG~s~~~~G~~~~~~~v~~i~g~~-~~~ 309 (468)
T TIGR00788 237 NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGAS---GSVFCA---TTQCLPGGPSFSGMSKVVGNLGSLCGVG-GYD 309 (468)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCC---ceeEEE---EcccCCCCcchhhhHHHHHHHHHHHHHH-HHH
Confidence 000011133445677888775555444 22221111 111111 1123899999999999999999999985 677
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 346 FLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
+..+|++.|+.+.++.++.+++.+.
T Consensus 310 ~~~~~~~~r~~l~~~~~l~~~~~~~ 334 (468)
T TIGR00788 310 RFLKTFPYRLLFGVTTLLYTLSSLF 334 (468)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHhC
Confidence 7778999999998888888776543
No 112
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.70 E-value=2.2e-16 Score=150.42 Aligned_cols=314 Identities=16% Similarity=0.196 Sum_probs=239.1
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.+.+..+...+....+...+..+.+.|+++.++ .|++.+.+-++..+...+..+..-|.-|-+.+-+|.+++++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 455666777777778888889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhcc--------------------c-----------------------------h--HH-HHHHHHHHHhhhccch
Q 015847 125 FNTLFGLS--------------------V-----------------------------N--FW-MAVLTRFLLGSLNGLL 152 (399)
Q Consensus 125 ~~~~~~~~--------------------~-----------------------------~--~~-~l~~~r~l~G~~~~~~ 152 (399)
+++++++- + + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99988741 0 0 23 5667789999999998
Q ss_pred hhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCC-CCccc---ccccccCCcchhhHHHHHHHHH
Q 015847 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFS---SESLFGKFPYFLPCLCISLFAF 227 (399)
Q Consensus 153 ~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~-~~~~g---w~~~f~~~~~~~~~~~~~~~~~ 227 (399)
.+. .+|+-|...+++-...+|+..+...+|.++|-++++++......+ ....+ -+..| --.||..|++.+.+.+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLL 333 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 886 999999999999999999999999999999999999998643222 11111 11112 3358899999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCCccchhhhhhhhh----hhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHH
Q 015847 228 GVTIAAFWLPETLHRHNDDDDSCDVSYDALESA----SAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 303 (399)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
+..+.++++|+..++..++.+..+......++. .....++.++.+...+++++||.+....+...+......++.+
T Consensus 334 ~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 988888888887665443211111110000000 0000111123345677889999999999999999999999999
Q ss_pred HHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHhH
Q 015847 304 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 370 (399)
++|.|+++. +|.++..+..+.+..++.....+++++|++.+|+. .|....+..+...+.++.
T Consensus 414 FlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 414 FLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred hhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 999999988 99999999999999999888888889999999865 445555444444444433
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.69 E-value=4e-15 Score=133.34 Aligned_cols=217 Identities=14% Similarity=0.093 Sum_probs=153.0
Q ss_pred ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc-ccccc
Q 015847 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSES 208 (399)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~-~gw~~ 208 (399)
..++++.++++-++.|.|.+...+. ++++++..++|++.+.+++.+.++++|..++|.+++.+.......... .+-..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999998885 999999999999999999999999999999999999888421100000 00000
Q ss_pred cccCCcchhhHHHHHHHHHHHHHHHHhc--ccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHH
Q 015847 209 LFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (399)
Q Consensus 209 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (399)
.. .+.|+.++++.+...++..+.+.+. ||.++++. ++... ++..+.++.+++|.++.
T Consensus 86 ~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~---~~~~~-----------------~~~~~~~~~~~~~~~~l 144 (310)
T TIGR01272 86 AE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV---ARVSS-----------------GDTTQKTSAFQFTHLVL 144 (310)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc---ccccc-----------------ccccchhhHHhhHHHHH
Confidence 00 1245666675555544433333333 44221110 00000 00011234677888888
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 015847 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (399)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (399)
..+..+++.....+...+++.|+.++ +.+|+++.+.+...+.+..+.++++ ++++++.||+++++.+.++..+..+
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88888888889999999999999643 1168899999999999999999999 4999999999999988887777766
Q ss_pred HHhHHh
Q 015847 367 LLTSYP 372 (399)
Q Consensus 367 ~~~~~~ 372 (399)
+.++..
T Consensus 221 ~~~l~~ 226 (310)
T TIGR01272 221 LSIGAA 226 (310)
T ss_pred HHHHHH
Confidence 654443
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.66 E-value=2.8e-14 Score=127.55 Aligned_cols=286 Identities=12% Similarity=0.087 Sum_probs=189.4
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
...+..+.+.+....+.+...+...-|| +.+. .-|...+|++.+....+++-|+.||+|-|...+++..+.++
T Consensus 49 ~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~i 121 (480)
T KOG2563|consen 49 AFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGI 121 (480)
T ss_pred HHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHH
Confidence 4444555555555555666667777778 5555 88999999999999999999999999999999999999999
Q ss_pred HHHHHhccc------hHH--HHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 125 FNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 125 ~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+..+-..+. .++ ....+..+.+.++-..... .-+..-||++++|..+..+-..+..+|.++|.++...+..
T Consensus 122 Ga~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 122 GAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 998766542 344 4556666666666665555 4566678999999999999999999999999999999987
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcc
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (399)
+..+ .+...|. ....++...+++.+.+ +..+..++.|+..+...+..+. +.+-...
T Consensus 202 ~~~~-~~~~~~~-------~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~~s 258 (480)
T KOG2563|consen 202 SSKD-SEDNSWL-------FFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFPKS 258 (480)
T ss_pred CCCC-cchhHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHHHH
Confidence 4421 1122222 1212343333333333 2333334433322221111100 1112346
Q ss_pred cccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Q 015847 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP- 353 (399)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 353 (399)
.++.++|+++....+.+........+..+.+..-+.. -|++...+|.......++++++.+ +.+.+.||.+.
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~------sgY~~~~aG~ig~l~iv~Gmlga~-~~gii~Dktk~f 331 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP------SGYEGVFAGYIGALMIVAGMLGAL-ASGIIADKTKKF 331 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc------ccCCccccchhHHHHHHHHHHHHH-HHHhhhhhhhhH
Confidence 6788999999888888877666666665554432222 456668889999998999999985 77888888665
Q ss_pred hhHHHHHHHHHHHH
Q 015847 354 IMVARIAGVLTIPL 367 (399)
Q Consensus 354 ~~~~~~~~~~~~~~ 367 (399)
|....+......++
T Consensus 332 k~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 332 KLTTLVLYLFALVG 345 (480)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444444
No 115
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.65 E-value=2.6e-14 Score=132.96 Aligned_cols=307 Identities=20% Similarity=0.279 Sum_probs=198.0
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
...+..+..++......+..+.....++.+.... .....+.......+...+.++..|.++||+|||..+....+...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 3444445555555555555555555554443321 111133333344677788999999999999999999999998888
Q ss_pred HHHHHhccchHHHHHHHHHHHhhhcc---chhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCC
Q 015847 125 FNTLFGLSVNFWMAVLTRFLLGSLNG---LLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (399)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~ 201 (399)
..+...+.. |++++ +.++..+ ......++++|....++|...+|+.+.....+..++|.+++.+.+
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 887776655 33333 5555333 334459999999999999999999999999999999999999998
Q ss_pred CcccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccc
Q 015847 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (399)
Q Consensus 202 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (399)
..+...++.+..+..++..+ ...++||+..++++++...... ..+ . ....+..+........-.
T Consensus 174 ----------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~~~~~~ 238 (463)
T KOG2816|consen 174 ----------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL--TPG--S-LDSSHVADAFQSLTKVGP 238 (463)
T ss_pred ----------hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc--CCC--c-ccchhhhhhhhhhcccCC
Confidence 45566677777777766544 4677888876554432000000 000 0 000000011111112223
Q ss_pred cchhHHHHHHHHHHHhhhh-hHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Q 015847 281 NWPLMSSIIVYCVFSLHDM-AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (399)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (399)
+|..+.+....+....... ......+.|+..+ ++++..+.+.+.+..++...+++.+..+.+.+.++.++.+..
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~-----f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK-----FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeee-----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 3444443333333322222 2221234455554 899999999999999999999998888899999999999899
Q ss_pred HHHHHHHHHhHHhHHHHHHHHHHH
Q 015847 360 AGVLTIPLLTSYPYIAMLSGFGLA 383 (399)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (399)
|...-.+....+++.+.....+..
T Consensus 314 Gl~~~~~~~~~~af~~~~w~~~~~ 337 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFATETWMMFAA 337 (463)
T ss_pred HHHHHHHHHHHHHHhccchhhhHH
Confidence 999999999998887765554433
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.65 E-value=4.8e-16 Score=129.90 Aligned_cols=291 Identities=14% Similarity=0.121 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc-cCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~ 120 (399)
.+..+++..|.+++.+..-.....++.++.+++..+ ..++.+.++....+.+++.|++.|| +|-|..-++-+.
T Consensus 45 ~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 45 ALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred HHHHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 344556666666777777777777888888888888 8999999999999999999999997 577776666666
Q ss_pred HHHHHHHHHhc---cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 121 SVVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 121 ~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
...++.+.++. .+.+|.+..+|++.|+|.-...++ ..+..-|+..|+.+.++|+......+|..+--.+.+++.+.
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 66777776654 689999999999999987666665 99999999999999999999999999998887777777763
Q ss_pred CCCCCCcccccccccCCcchh---hHHHHHHHHHHHHHHHH---hcccCCCCCCCCCCccchhhhhhhhhhhhhhhcccc
Q 015847 197 AEKYPNLFSSESLFGKFPYFL---PCLCISLFAFGVTIAAF---WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~---~~~~~~~~~~~~~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (399)
.+. .++ .-+-.. ...+....+...++... +..+..++..++++ . ...
T Consensus 199 ~~~---~~~------~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~-----------g-------~~G 251 (459)
T KOG4686|consen 199 MGR---MFP------GVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEE-----------G-------FLG 251 (459)
T ss_pred HHH---hcc------cchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhc-----------C-------ccc
Confidence 211 010 000000 00111111111111111 11111100000000 0 000
Q ss_pred CCccccccc-ccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015847 271 EATPKKSLL-KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (399)
Q Consensus 271 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (399)
+..+..+.. -.|++|...+..+++....+-+.+.-|.+.++. +|+|+..++.+.+.......+.. ++.+.++|
T Consensus 252 e~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r-----fGlS~~~a~~i~s~vy~Isav~s-pvfg~i~D 325 (459)
T KOG4686|consen 252 EEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKR-----FGLSAVSAGNILSTVYGISAVLS-PVFGAISD 325 (459)
T ss_pred CCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----hCCChhhccchhhhhhhhhhhhh-hhHHHhHh
Confidence 000111111 247889888888888888888888888888777 99999999998888877777777 58899999
Q ss_pred HhcchhHHHHHH-HHHHHHHhHH
Q 015847 350 ILGPIMVARIAG-VLTIPLLTSY 371 (399)
Q Consensus 350 ~~~~~~~~~~~~-~~~~~~~~~~ 371 (399)
|.|++-..+.+. +....+-..+
T Consensus 326 k~G~n~~wv~~a~~~tl~~H~~l 348 (459)
T KOG4686|consen 326 KYGFNLWWVASACILTLLGHSGL 348 (459)
T ss_pred hhcceehhHHHHHHHHHHHhhhH
Confidence 999876655443 3334443333
No 117
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=1.1e-14 Score=139.47 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=125.0
Q ss_pred HHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH-
Q 015847 51 LCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL- 128 (399)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~- 128 (399)
++..........++|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+.+..+.++..+..+.
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333444455566777665 567888776 777888888999999999999999999999988887654433322
Q ss_pred --HhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccc
Q 015847 129 --FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (399)
Q Consensus 129 --~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~g 205 (399)
...+++...+++++++.|++.+.... ...++.|.+|++.|+++++.......+++.++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--------- 404 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--------- 404 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 22345677788889888887655444 477888999999999999985444566678899999988762
Q ss_pred ccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 015847 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (399)
Q Consensus 206 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (399)
..+|+.++.+..+.+++.++..+++||++++..+
T Consensus 405 ------~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 ------TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1124445555566666666667778999876543
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.61 E-value=2e-13 Score=121.77 Aligned_cols=289 Identities=17% Similarity=0.092 Sum_probs=181.3
Q ss_pred HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC-----CchhhHHH-HHHHHHHHHHHhc-----cc--
Q 015847 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMG-TASVVIFNTLFGL-----SV-- 133 (399)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~-~~~~~~~~~~~~~-----~~-- 133 (399)
+..|++++..- .+...+...+.. ...+.+|+.||+.+ ||..+++. ....+.+..+.++ +.
T Consensus 6 MIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~ 78 (403)
T PF03209_consen 6 MIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESG 78 (403)
T ss_pred HHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 45678887776 888888888775 46889999999999 88666554 5555555444443 12
Q ss_pred -----hH--H--HHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc
Q 015847 134 -----NF--W--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (399)
Q Consensus 134 -----~~--~--~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~ 203 (399)
+. + ...+...+.|+|.+...+. .++++|..|+|+|+++.++...+.-+|.+++..+.+.+.+.
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~------- 151 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP------- 151 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-------
Confidence 12 2 2344557778887776665 99999999999999999999999999999999999998872
Q ss_pred ccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccch
Q 015847 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (399)
Q Consensus 204 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (399)
++-.- ........+++.+...+...+-.|++..+..+.++++ +.+....++++..+|+
T Consensus 152 ~s~~r------L~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~~~~ 209 (403)
T PF03209_consen 152 FSPER------LIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWASPQ 209 (403)
T ss_pred cCHHH------HHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHhCCC
Confidence 11110 1111111122222222222222333322222111100 0111224556667777
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (399)
........++.......-... -+|+.-+-+|++..+...+....+.+..++....+.++.+|.++++...+++..
T Consensus 210 a~~f~~fl~l~t~a~~~QD~i-----LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 210 ARRFFVFLFLGTLAFFMQDVI-----LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLL 284 (403)
T ss_pred hhHHHHHHHHHHHHHHhhHHH-----cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 776666655554444333333 345444459999999999999999999888865555566678888888899998
Q ss_pred HHHHHhHHhHHHHHH-HHHHHHHHHHHHhhhhhc
Q 015847 364 TIPLLTSYPYIAMLS-GFGLAFLLNCASVVKNLL 396 (399)
Q Consensus 364 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 396 (399)
.++++.++....... .......++..++..+.+
T Consensus 285 ~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 285 GALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 888887776554432 223444445555544443
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=6.9e-15 Score=137.82 Aligned_cols=174 Identities=12% Similarity=0.123 Sum_probs=126.4
Q ss_pred chhhhHHHHHHHhccCcccc--chhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccc---
Q 015847 59 SLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--- 133 (399)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--- 133 (399)
......+.+.++.|.++... ......+...++..++..++.++.|+++||+|||+++..+.++..++..+.....
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~ 305 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEY 305 (418)
T ss_pred HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcch
Confidence 34455566666776554210 0001178999999999999999999999999999999999998888876665532
Q ss_pred -hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHH-HHHHHHHhHHHHhhhhhcCCCCCCCCcccccccc
Q 015847 134 -NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (399)
Q Consensus 134 -~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f 210 (399)
+.+.+++.+++.|++.+...+. ..++.|.+|+++|++++|+.+ ...++|..+||.++|++.+..++. ..+||+.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~-~~~~~~~-- 382 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY-GTFDWQT-- 382 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-cCCchHH--
Confidence 2456777889999988877775 889999999999999999997 678999999999999998832210 0123444
Q ss_pred cCCcchhhHHHHHHHHHHH-HHHHHhcccCCCC
Q 015847 211 GKFPYFLPCLCISLFAFGV-TIAAFWLPETLHR 242 (399)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~ 242 (399)
.+.+.++..++. ++..+++||+.+.
T Consensus 383 -------~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 383 -------MWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 446665555543 4456667776443
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.61 E-value=3.8e-13 Score=118.15 Aligned_cols=276 Identities=15% Similarity=0.107 Sum_probs=176.4
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
.+.+...+....+|+.-.+.+++|.++.| ++.+.........+..++.|.++||+|||+.-++.+++..++++.
T Consensus 42 vY~La~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 42 VYLLAMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred HHHHHHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 34445556677788888778899999999 999999999999999999999999999999999999999999975
Q ss_pred HhccchHHHHHHHHHHHhhhccchhhH-HH-HHhhhc----cchhhhHHHHHHH-HHHHHHHhHHHHhhhhhcCCCCCCC
Q 015847 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KA-YACEIF----REEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYP 201 (399)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~-~~~~~~----~~~~r~~~~~~~~-~~~~~g~~~~p~i~~~l~~~~~~~~ 201 (399)
. ..++++.++++|++.|++......+ -+ ++.|.- |++..+..++... ...++-.+.+..++-++.+..
T Consensus 116 k-~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~---- 190 (354)
T PF05631_consen 116 K-HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF---- 190 (354)
T ss_pred H-hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh----
Confidence 4 5688999999999999998887664 44 455653 3333333333333 223344445555555555511
Q ss_pred CcccccccccCCcchhhHHHHHHHHHHHHHHH-HhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccc
Q 015847 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (399)
Q Consensus 202 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (399)
..+...||.....+.++..+.+ ..-+|......++.+..+. .....+.+.+
T Consensus 191 ----------~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------------~~~a~~~i~~ 242 (354)
T PF05631_consen 191 ----------GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------------FREAWRAILS 242 (354)
T ss_pred ----------CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH------------------HHHHHHHHHc
Confidence 2223556666666655544443 3345654432221111110 0113455778
Q ss_pred cchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 015847 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (399)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (399)
||+++.+.+...++-.....+. ++.+|.... .+ ...-.|++++......++++.+......++......+...
T Consensus 243 d~ril~LG~~qslFE~smy~FV-----flWtPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v 315 (354)
T PF05631_consen 243 DPRILLLGLIQSLFEGSMYLFV-----FLWTPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYV 315 (354)
T ss_pred CchhHHHHHHHHHHHHHHHHhe-----eeeeceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 8999888888777766655442 233333221 11 2334799999999999999863334455555555555555
Q ss_pred HHHHHHHHhH
Q 015847 361 GVLTIPLLTS 370 (399)
Q Consensus 361 ~~~~~~~~~~ 370 (399)
..+.++++.+
T Consensus 316 ~~~aa~~l~~ 325 (354)
T PF05631_consen 316 FAVAAVSLAI 325 (354)
T ss_pred HHHHHHHHHH
Confidence 5555544444
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=1.3e-14 Score=142.56 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhc
Q 015847 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF 163 (399)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~ 163 (399)
.+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.+...+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445667788999999999999999999999999999999999998888888888888888886555555 599999999
Q ss_pred cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCC
Q 015847 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (399)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (399)
|.++|++++|+.+....+|.++||.+++.+.+ . ....++++.+++.++..+...++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999998875 1 1345667777666766666777888764
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=4.5e-14 Score=131.57 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=122.4
Q ss_pred chhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 015847 59 SLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (399)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (399)
......|.+ .+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAI 307 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 344556644 5678998888 888888877888889999999999999999888777666655555555677888
Q ss_pred HHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
+++.+++.+++.+...+. ..+..|.+|+ +|++++++++....+|..++|.++|.+.+ .++|+
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g~~ 370 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWNYH 370 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhhhH
Confidence 888888888876665553 6778898885 59999999988899999999999999988 34455
Q ss_pred hhHHHHHHHHHHHHHHHHhccc
Q 015847 217 LPCLCISLFAFGVTIAAFWLPE 238 (399)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e 238 (399)
.++.+..++.++.++..++.||
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 371 AVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 5557777777777777777665
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=1.7e-14 Score=113.60 Aligned_cols=135 Identities=33% Similarity=0.576 Sum_probs=111.2
Q ss_pred HHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccch
Q 015847 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (399)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~ 166 (399)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+. .+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44566788889999999999999999999999999999888888899999999999999998877775 89999999999
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhccc
Q 015847 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (399)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (399)
+|++.++..+....+|..++|.+++.+.+ ..+| +..+.+.+...++..+. .+..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ-------FLGW---------RAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc-------ccch---------HHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999987 3344 44446655555554443 333444
No 124
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=4.8e-14 Score=132.09 Aligned_cols=134 Identities=21% Similarity=0.275 Sum_probs=114.9
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
.........|.+.++.|.+..+ .+...+...++..++.++.|+++||+|||+.+..+.+...++.+...+.++.
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSF 308 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 3344455678888888999888 9999999999999999999999999999999988777777777777777788
Q ss_pred HHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+.+..++.|++.+...+ ..++..|.+|+++|++++|+.+....+|..++|.++|.+.+
T Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 309 AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 7777777888887655555 48899999999999999999999999999999999999987
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=7.9e-14 Score=130.32 Aligned_cols=160 Identities=19% Similarity=0.165 Sum_probs=126.2
Q ss_pred cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (399)
......++.+.++.|. .+ .++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T PRK05122 233 GTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWM 304 (399)
T ss_pred HHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3444556655566665 33 566677888888999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
+++..++.|++.+...+. .....|.+|+++|+++.++++....+|..++|.+.|.+.+ .++|+
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~g~~ 368 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WFGYP 368 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcCHH
Confidence 888899999988776664 7778899999999999999999999999999999999987 33444
Q ss_pred hhHHHHHHHHHHHHHHHHhcccCCC
Q 015847 217 LPCLCISLFAFGVTIAAFWLPETLH 241 (399)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (399)
..+...+++.++..+....++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 369 SIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 4557776666666666555555443
No 126
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.56 E-value=4.4e-12 Score=119.42 Aligned_cols=257 Identities=18% Similarity=0.152 Sum_probs=176.1
Q ss_pred hhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH-HHHHHHHHHHHhcc-ch-HHHHHHHHHHHhhhccchhhH-HH
Q 015847 82 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG-TASVVIFNTLFGLS-VN-FWMAVLTRFLLGSLNGLLGPI-KA 157 (399)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~-~~-~~~l~~~r~l~G~~~~~~~~~-~~ 157 (399)
.+.++..++..+..++..|+.|.++|+-|+||.++.. ..+..+++.++.+. ++ ++...+..++.-++.+...+. .+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888899999999999999999999977665544 45555566665553 33 333334444444565555554 99
Q ss_pred HHhhhccchhh--------------------------hHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccccccccc
Q 015847 158 YACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (399)
Q Consensus 158 ~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~ 211 (399)
++.|..+++++ ++..+.-.....+|+.+.-.+.-.+....+.. .-.
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--------~~~ 221 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--------ASN 221 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--------ccc
Confidence 99999998888 88888888888888888777766654322110 000
Q ss_pred CCcchhhHHHHHHHHHH-HHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHH
Q 015847 212 KFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 290 (399)
Q Consensus 212 ~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (399)
.++.+..+.+.++..++ .+...+++||.++....++... ......+ +.....++..|.|+....++.
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~-~~~~g~~-----------~l~~t~k~~~~~~~~~~fLia 289 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS-YLRFGFK-----------RLWRTFKEIRKLRQLFLFLIA 289 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh-HHHHHHH-----------HHHHHHHHHHhChHHHHHHHH
Confidence 23456666666666555 3445667787765322211110 0000000 011234556677888899999
Q ss_pred HHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHH
Q 015847 291 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLT 364 (399)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ 364 (399)
++++.-.......+...|..+. +|++..+...+.....+..+++.. +.+++.||+|.| +.+..+.++.
T Consensus 290 ~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 290 YFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHH
Confidence 9999988888888999898877 899999999999999999999995 889999999988 6666655554
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=3.2e-14 Score=131.59 Aligned_cols=140 Identities=13% Similarity=0.016 Sum_probs=113.2
Q ss_pred HHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH
Q 015847 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (399)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (399)
.+.............+.+.+++|.++.+ .++..+...++..++.++.|+++||+|||+.+.++.++..++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 287 (377)
T TIGR00890 214 FFLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM 287 (377)
T ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3333333333444556667888888877 8999999999999999999999999999999999988888888777
Q ss_pred hccchH--HHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 130 GLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 130 ~~~~~~--~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.++. ..++...++.|++.+...+. .+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 288 LFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666543 33445667778876666554 8889999999999999999999999999999999999988
No 128
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=1.3e-13 Score=127.90 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.++...+..++............|.+.+++|.++.+ .|...+...++..+..++.+++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 4444444555555555666677778777889999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHH-HHHHHHHhHHHHhhhhhcC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~i~~~l~~ 195 (399)
...+..+..+++++.+.+++.+++.|+..+...+. ..++.+. |+++|++..++++ ...++|..++|.++|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888875 8899988 9999999999985 5788999999999999998
No 129
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.54 E-value=1.8e-12 Score=117.97 Aligned_cols=176 Identities=17% Similarity=0.214 Sum_probs=140.6
Q ss_pred hHHHHHHHHHHHhhccccchhhhHH-HHHHHhc----cCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-CCchh
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPV 114 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~ 114 (399)
+.++.+...-+.+-+.++.....+- ++..+++ .++++ ..-+.++|..-.-+..+++|+++||+ |+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 5667777778888887776666654 5556666 88877 66666776666667889999999996 99999
Q ss_pred hHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHhhhccchhhH-HHHHhhhccch--hhhHHHHHHHHHHHHHHhHHHHh
Q 015847 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
+.+|.++..++.++.+.+. +...++++-++.++|.|..-+. .+++.|.+|++ +|-..++++..+.++|+.++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 7888999999999999999884 99999999853 46778888999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhccc
Q 015847 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (399)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (399)
.+++.+ +++|...|...++-..+.++.....+.
T Consensus 175 ~~~~~~----------------~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 175 TGLLAI----------------NYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHH----------------hhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999998 455555556666666666665555553
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=2.4e-14 Score=134.67 Aligned_cols=139 Identities=18% Similarity=0.146 Sum_probs=114.1
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~ 162 (399)
.|++.++..++..++.++.|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+ ...++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999998888888899999999999999988777655 48899999
Q ss_pred ccchhhhHHHHH-HHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhccc
Q 015847 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (399)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (399)
+|++.|++..+. ++....+|..++|.+.|++.+ .+||+ ..+...+++.++..+. ...+++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-------~~G~~---------~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-------SIGFQ---------GTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------hhCch---------HHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999888765 677889999999999999998 44444 4446666665544433 344444
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=2.9e-13 Score=123.90 Aligned_cols=163 Identities=22% Similarity=0.316 Sum_probs=136.5
Q ss_pred HHHhhccccchhhhHHHHHHHh-ccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCch-hhHHHHHHHHHHHH
Q 015847 50 VLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNT 127 (399)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~ 127 (399)
.+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344444555666677666554 888888 999999999999999999999999999999 99999999999999
Q ss_pred HHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccc
Q 015847 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (399)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw 206 (399)
.....++.+.+.+..++.|++.+...+. .+++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~----------- 326 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD----------- 326 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999898999999999999998887775 9999999999999999999999999999999999999997
Q ss_pred cccccCCcchhhHHHHHHHHHHHHHHHH
Q 015847 207 ESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (399)
Q Consensus 207 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (399)
..+|+..+.+.+++.++..+...
T Consensus 327 -----~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 327 -----TGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred -----ccCcchHHHHHHHHHHHHHHHhe
Confidence 33444444777776666555443
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=2.2e-13 Score=128.07 Aligned_cols=162 Identities=17% Similarity=0.120 Sum_probs=129.5
Q ss_pred chhhhHHHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 015847 59 SLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (399)
Q Consensus 59 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (399)
......|.+.++ +|.+..+ .+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 314 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWIL 314 (417)
T ss_pred hHHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHH
Confidence 345566766666 8998888 999999999999999999999999988888888888888888888888888888
Q ss_pred HHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
..++.++.|++.+...+. .+++.|..|++.|++++|+++....+|..+||.+.|.+.+ .++.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~ 378 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPV 378 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchh
Confidence 888888899887777665 7899999999999999999999999999999999999998 33333
Q ss_pred hhHHHHHHHHHH-HHHHHHhcccCCCC
Q 015847 217 LPCLCISLFAFG-VTIAAFWLPETLHR 242 (399)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~e~~~~ 242 (399)
..+...++..++ ..+....+||.++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 379 ASASASGFGLLIIGVLLLLVLGELRRF 405 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHhccccccc
Confidence 334544444333 44455666665543
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.51 E-value=3.4e-13 Score=124.92 Aligned_cols=155 Identities=15% Similarity=0.294 Sum_probs=120.8
Q ss_pred hhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 015847 61 FPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (399)
Q Consensus 61 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (399)
....|. +.+++|.++.+ .++..+...+...++.++.|++.||+|||+.+.++.++..+......+.++.+.++
T Consensus 219 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALL 292 (375)
T ss_pred HhhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454 45778998888 88888887777788899999999999999999888777666666666677888888
Q ss_pred HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhh
Q 015847 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~ 218 (399)
+.+++.|++.+...+. ..++.|..|+ +|++++++.+....+|..++|.++|.+.+ .++|+..
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~~ 355 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHAV 355 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchhH
Confidence 8889999987776664 7888898875 56799999999999999999999999988 3344444
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 015847 219 CLCISLFAFGVTIAAFWLPE 238 (399)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e 238 (399)
+...++..++..+...+++|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 356 YWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHheecC
Confidence 57776666666666555543
No 134
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=8.4e-13 Score=122.99 Aligned_cols=179 Identities=12% Similarity=0.077 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
..+.+....++..........++|.+.+++|.+..+ .+...+.+.++..++.++.|++.||+|||+.+..+..+
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l 279 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVL 279 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Confidence 334344444444455556667778777788999888 99999999999999999999999999999999888877
Q ss_pred HHHHHHHHhc-cchHHHHHHHHHHHhhhccchhh-HHHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 122 VVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 122 ~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
..++.++... .++...+. -++.|++.+...+ ......+..+ +++|++.+++.+....++..++|.+.|++.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~- 356 (393)
T PRK09705 280 QLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS- 356 (393)
T ss_pred HHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 7777665543 33322222 2456777666656 4556667764 678999999999999999999999999999832
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCC
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRH 243 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~ 243 (399)
| ++...+.+.++.++..... ..+.||++++.
T Consensus 357 ------g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 357 ------G--------NYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred ------C--------CchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1 1344445555555554443 55567765544
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=1.2e-13 Score=131.02 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=116.6
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc--CCchhhHH--H
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM--G 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~l~~--~ 118 (399)
++......++..........++|.+.+++|.+..+ .+++.++..++..+++++.|+++||. ++|+...+ +
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 316 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFA 316 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHH
Confidence 44444445555555556666778777888999888 99999999999999999999999984 33433333 3
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+..+++.++....++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 317 ~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 317 LLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 3444455556667788888899999999998887775 8999999999999999999999999999999999999987
No 136
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=6.2e-13 Score=123.97 Aligned_cols=155 Identities=21% Similarity=0.206 Sum_probs=123.0
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (399)
.........+.+.++.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWAM--------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA 302 (392)
T ss_pred HHhHHHHHHHHHHHhcCCch--------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccH
Confidence 33444556666666666543 5566677788888999999999999999999999998888888888888888
Q ss_pred HHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 136 ~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
+.+++..++.|++.+...+. .+.+.|.+|+++|++++|+.+....+|..++|.+.+++.+ ..||+.
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-------~~g~~~------ 369 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT-------SFGYPS------ 369 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCchH------
Confidence 88888899999988877664 7888999999999999999999999999999999999998 444444
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q 015847 215 YFLPCLCISLFAFGVTIAAF 234 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (399)
.+...+++.++..+...
T Consensus 370 ---~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 370 ---VFLAGAISAVLGIIVTI 386 (392)
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 44666666665544433
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=6.6e-13 Score=123.25 Aligned_cols=153 Identities=20% Similarity=0.271 Sum_probs=116.6
Q ss_pred cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (399)
.....++|.+.++.|.++.+ .++..+...++..+++++.|++.||+|+|+++..+.....++.+... + ...
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~ 287 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAA 287 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHH
Confidence 34445678777888988888 89999999999999999999999999999999888887777665443 2 233
Q ss_pred HHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch
Q 015847 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~ 216 (399)
.....++.|++.....|. .+.+.|..|+++++...+..+...++|..+||.++|++.+ +.|| +
T Consensus 288 ~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~-------~~g~---------~ 351 (381)
T PRK03633 288 MAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ-------NYSD---------N 351 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCc---------c
Confidence 345667777765555664 8888999999888888888888999999999999999998 3343 4
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 015847 217 LPCLCISLFAFGVTIAAFW 235 (399)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~ 235 (399)
..+.+.+.+.++.....++
T Consensus 352 ~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 352 LLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4446666666554444443
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=4.5e-13 Score=125.59 Aligned_cols=159 Identities=18% Similarity=0.215 Sum_probs=122.8
Q ss_pred ccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHH
Q 015847 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (399)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (399)
.....+..+.+.++.+.+..+ .....+.+.++..++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPL 312 (408)
T ss_pred HHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHH
Confidence 344556666665554333222 112256666777888889999999999999999999999888888877777778888
Q ss_pred HHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcc
Q 015847 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (399)
Q Consensus 137 ~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~ 215 (399)
.+++.+++.|++.+...+. .+.+.+..|+++|++.++..+....+|..+||.++|.+.+ .. +|
T Consensus 313 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~-------~~---------g~ 376 (408)
T PRK09874 313 QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA-------NY---------GF 376 (408)
T ss_pred HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh-------hc---------ch
Confidence 8889999999998887775 8888899999999999999999999999999999999988 33 44
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 015847 216 FLPCLCISLFAFGVTIAA 233 (399)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~ 233 (399)
+..+.+.++..++..+..
T Consensus 377 ~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 377 RAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 444577766666654443
No 139
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.47 E-value=6.6e-13 Score=124.15 Aligned_cols=171 Identities=15% Similarity=0.239 Sum_probs=123.1
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhH-HHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~ 121 (399)
++...+..++............|.+.+++|.+..+ .++..+...++..++.++.|+++||+|||+.+. .+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~ 297 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVG 297 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 33344444444555555667788888889999988 889889999999999999999999999988764 33333
Q ss_pred HHHHHHHHh-----ccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 122 VVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 122 ~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
..++.+... ..++.+..++..++.|++.+...+....+.|.. +++|++++|+.+....+|..++|.+++.+.+
T Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~- 375 (402)
T TIGR00897 298 CGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG- 375 (402)
T ss_pred HHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 333332222 134666777788888887666555556667764 4689999999999999999999999999998
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhc
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
.+++...+.+.+++.++..+...++
T Consensus 376 ---------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ---------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ---------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555567766666655554443
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=1.4e-12 Score=121.38 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCch--hhH-
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP--VII- 116 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~--~l~- 116 (399)
+.++......++............|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 3444555555666666666677777554 568888888 999999999999999999999999999996 111
Q ss_pred -----HHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 117 -----MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 117 -----~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
.+.++..+........++.+..+....+.+.+.+ ..+ ..+++.|.+|+++|++++++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 1111111112222223344444444444444555 455 599999999999999999999999999999999999
Q ss_pred hhhcC
Q 015847 191 GFLAQ 195 (399)
Q Consensus 191 ~~l~~ 195 (399)
+.+.+
T Consensus 368 g~l~~ 372 (399)
T TIGR00893 368 GAIAA 372 (399)
T ss_pred hhhcc
Confidence 99998
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=1.9e-12 Score=120.58 Aligned_cols=149 Identities=13% Similarity=0.146 Sum_probs=112.3
Q ss_pred hhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH-HHHhccchHHHHH
Q 015847 62 PFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWMAV 139 (399)
Q Consensus 62 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~ 139 (399)
..++ .+.+++|.+..+ .++..+...++..+++++.|+++||+|||+... +..+..++. ......++.+.++
T Consensus 226 ~~~~~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 298 (390)
T PRK03545 226 SYIEPFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLS 298 (390)
T ss_pred HHHHHHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHH
Confidence 3444 445567888888 999999999999999999999999999887544 444333333 3344567788888
Q ss_pred HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhh
Q 015847 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~ 218 (399)
++.++.|++.+...+. .+.+.|..| ++|++++|.++....+|..+||+++|.+.+ .++++..
T Consensus 299 ~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~ 361 (390)
T PRK03545 299 VLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSI 361 (390)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHH
Confidence 8888999986665554 777778766 688999999999999999999999999998 4444444
Q ss_pred HHHHHHHHHHHHHHHH
Q 015847 219 CLCISLFAFGVTIAAF 234 (399)
Q Consensus 219 ~~~~~~~~~~~~~~~~ 234 (399)
+...+.+.++..+...
T Consensus 362 ~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 362 GYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5777766666554433
No 142
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=1.1e-12 Score=122.37 Aligned_cols=146 Identities=11% Similarity=0.112 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
++...+..++..........+.|.+. +++|.+..+ .+++.+.+.++..++.++.|+++||+|||+.+.....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~ 280 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 33444444444444455667788666 668999988 99999999999999999999999999999999888877
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++...+....++.+.+.+..++.|++.+...+. .++..|..| +++++..+.......+|..++|.+.|++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 281 ALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 7777777666777777777778888876655554 677777765 456778888888889999999999999998
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=1.8e-12 Score=124.75 Aligned_cols=131 Identities=20% Similarity=0.245 Sum_probs=103.7
Q ss_pred chhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc--chH
Q 015847 59 SLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNF 135 (399)
Q Consensus 59 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~ 135 (399)
.....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHH
Confidence 3456778766 588999988 9999999999999999999999999999999888877666655444332 344
Q ss_pred HHHHHHHHHHhh-hccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 136 WMAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 136 ~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+.+..++.+. +.+......+++.|.+|+++|++++++.+....+|..+||.++|.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 444444454444 334333347889999999999999999999999999999999999998
No 144
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=1.6e-12 Score=123.99 Aligned_cols=148 Identities=15% Similarity=0.159 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
.++...+..++..........++|.+ .+++|.+..+ .++..+...++..++.++.|+++||+|||+.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 34445555555555555566778855 4678999988 8999999999999999999999999999988766544
Q ss_pred HHHHHH--HHHhccchHHHHHHHHHHHhhhc-cchhhHHHHHhhhccchhhhHHHHHHHHHHHH-HHhHHHHhhhhhcC
Q 015847 121 SVVIFN--TLFGLSVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (399)
Q Consensus 121 ~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~i~~~l~~ 195 (399)
+..++. +.....++.....+.+++.|+.. +..........|.+|+++||++.|+.+....+ |..++|.+.|++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 443332 22233456666767788888643 33333356777999999999999999988886 77999999999988
No 145
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=2.4e-12 Score=121.65 Aligned_cols=167 Identities=15% Similarity=0.149 Sum_probs=114.7
Q ss_pred hhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc
Q 015847 53 TALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (399)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (399)
..........+.|.+ .+++|.+... ...+.....+...++.++.|+++||+|||+++..+.++.+++.+.+..
T Consensus 262 ~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 335 (438)
T PRK09952 262 ELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFM 335 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 333444455566644 4667887765 555555666677788899999999999999988887666554433322
Q ss_pred ---c-chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHH-HHHHHHHHhHHHHhhhhhcCCCCCCCCccc
Q 015847 132 ---S-VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (399)
Q Consensus 132 ---~-~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~i~~~l~~~~~~~~~~~g 205 (399)
. ++.+.+++..++.+++.+...+ ..+++.|.+|++.|+++.++. +.+..+|+.++|.+.+++.+..
T Consensus 336 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~-------- 407 (438)
T PRK09952 336 ALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF-------- 407 (438)
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 2 2344444555666777666555 489999999999999999985 4555689999999999998721
Q ss_pred ccccccCCcchhhHHHHHHHHHHHHHHHHhcccC
Q 015847 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 206 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (399)
..+|..++.+.++.+++..+..+.++|+
T Consensus 408 ------~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 408 ------GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 1224555566777777766666666653
No 146
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.42 E-value=8.5e-11 Score=104.95 Aligned_cols=275 Identities=12% Similarity=0.012 Sum_probs=176.9
Q ss_pred hhhhhHHHHHHHHHHHhhhhcccccccccCCchhh-HHHHHHHHHHHHHHhccch--HH-HHHHHHHHHhhhccchhhH-
Q 015847 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI-IMGTASVVIFNTLFGLSVN--FW-MAVLTRFLLGSLNGLLGPI- 155 (399)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~--~~-~l~~~r~l~G~~~~~~~~~- 155 (399)
..+.+...++..+..++.+|+.|.++|+.|+||.. -....+..++.++..+.++ ++ ..++...+..++.....+.
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 34488888999999999999999999999966554 4445555566666666554 44 4455557777776666664
Q ss_pred HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh--hhhcCCCCCCCC-cccccccccCCcchhhHHHHHHHHHHHHHH
Q 015847 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYPN-LFSSESLFGKFPYFLPCLCISLFAFGVTIA 232 (399)
Q Consensus 156 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~--~~l~~~~~~~~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (399)
.+++.+..++++-++..+.-.....+|+.+.-.+. +.......+.+. .++-.... ...-+..+.+.++-.++..+-
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhH
Confidence 99999999998888877776666666666554443 222111111100 01111112 334555556666665554433
Q ss_pred -HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcC
Q 015847 233 -AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS 311 (399)
Q Consensus 233 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (399)
++..++.++...+.. ....+..+ +.....++..+++++...++..+++.=...+...+-..|...
T Consensus 216 m~~~v~~~~~~~~~~~---~~l~~g~k-----------~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~ 281 (438)
T COG2270 216 MILNVHDAEKISSPPP---TALRNGFK-----------ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA 281 (438)
T ss_pred HHhcccccccccccch---HHHHHHHH-----------HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344444432110110 11001111 112245566677788888888888887777777777777775
Q ss_pred CcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHHH
Q 015847 312 PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 312 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
. +|++..+...+.....+..+++.+ +.+++++|++.|+++..+.++..+..+...+...
T Consensus 282 ~-----~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~ 340 (438)
T COG2270 282 D-----LGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG 340 (438)
T ss_pred H-----cCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc
Confidence 5 899999999999999999999995 8899999999999988888777666555444433
No 147
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.40 E-value=5.3e-12 Score=117.26 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (399)
++......++............|.+.+|.|.++.+ .|...+...++..+..++.|++.||+|+|+.+..+.++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 33333334444444444556667666788999888 899999999999999999999999999999999999998
Q ss_pred HHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHH-HHHHHHHhHHHHhhhhhcC
Q 015847 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~i~~~l~~ 195 (399)
+++.+..+..++.+.+++..++.|++.+...+. ..++.+. +++++++..+..+ ....+|..+||.++|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 281 VVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999999999998877775 7777776 5666788899885 6677888999999999998
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=7.6e-12 Score=119.58 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=123.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
...+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+..+.++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 361 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAI 361 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 334444444445556667778888899999877 88899999999999999999999999999999998888777
Q ss_pred HHHHHhc-----cc------hHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhh
Q 015847 125 FNTLFGL-----SV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (399)
Q Consensus 125 ~~~~~~~-----~~------~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 192 (399)
+.++.++ .+ +...+....+..+.......+ ...++.|.+|+++|++++++.+....+|..++|.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 362 CLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666652 11 222333333333322222334 37788999999999999999999999999999999999
Q ss_pred hcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccCC
Q 015847 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETL 240 (399)
Q Consensus 193 l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~ 240 (399)
+.+ ..+|+..| .+.++++++..+. .++.||++
T Consensus 442 ~~~-------~~~~~~~f---------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 442 MLE-------SIGVGGVF---------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHH-------hcCcccee---------hhHHHHHHHHHHHHheecccCC
Confidence 987 34454444 5555555554444 34456544
No 149
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.39 E-value=1e-12 Score=122.36 Aligned_cols=147 Identities=20% Similarity=0.215 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
+.......++............|.+. +++|.++.+ .+...+...++..++.++.|+++||+|||+.+..+..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 34444444444555555666777665 678888888 89999999999999999999999999999987755544
Q ss_pred HHHHH--HHHhc--cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHH-HHHHHHHHhHHHHhhhhhcC
Q 015847 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 122 ~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+.. +...+ .++.+.++...++.|++.+...+ ..+++.|.+|+++|++++++. +....+|..++|.++|.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 43332 12222 24666677777888887766655 599999999999999999984 56677899999999999998
No 150
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=3.5e-12 Score=118.96 Aligned_cols=141 Identities=20% Similarity=0.259 Sum_probs=111.6
Q ss_pred HHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH
Q 015847 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (399)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 126 (399)
+...++..........+.|.+.+++|.+..+ .++..+...++..++.++.|+++||+|||+.+....+......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAV 329 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 3334444444555566778888899999888 9999999999999999999999999999955544444433333
Q ss_pred HHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
++....++.+.+++..++.|++.+...+. .+++.|.+|+++|++++|+......+|..+||.++|++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 330 LVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33333567777778888999987777664 99999999999999999999999999999999999876
No 151
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=5.4e-12 Score=119.81 Aligned_cols=171 Identities=13% Similarity=0.080 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc--CCchhh-HHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IMG 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~ 118 (399)
++...+..++..........++|.+.+ +.|.+..+ .++....+.++..++.++.|+++||+ +||+.. ...
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 344444444444444556677886665 47888888 88888899999999999999999999 555432 222
Q ss_pred HHHHHHHHHHHhc--cchHHHHHHHHHHHhhhccc-hhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhH-HHHhhhhhc
Q 015847 119 TASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLA 194 (399)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~i~~~l~ 194 (399)
..+..++.+...+ ..+.+...++.++.|.+... ......+..|.+|+++||+++|+.+....+|+.+ +|.+.|.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2233333322222 23444444444555543222 2223456789999999999999998888887654 799999999
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHh
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
+ .+||+ ..+.+.++.+++.++....
T Consensus 409 ~-------~~g~~---------~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 409 D-------FFGWD---------GGFMVMIGGSILAVILLIV 433 (452)
T ss_pred H-------Hhcch---------HHHHHHHHHHHHHHHHHHH
Confidence 8 44444 4446666655555444433
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.36 E-value=1.7e-11 Score=115.86 Aligned_cols=168 Identities=13% Similarity=0.017 Sum_probs=108.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc--CCchhh-HHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IMG 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~ 118 (399)
++.+....++..........++|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++|+.. ...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 33344444444444455566777665 668999988 89999999999999999999999999 333332 221
Q ss_pred H---HHHHHHHHHHhccchHHHHHHHHHHHhhhccchh-hHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 119 T---ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLG-PIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 119 ~---~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
. ....+...... ..+........+..|++..... .......|.+|+++|++++|+.+....+|..++|.+.|++.
T Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 1 11111112222 2333333334444454322222 23556789999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHH
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (399)
+ ..|| ...+...++++++..+..
T Consensus 398 ~-------~~g~---------~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 398 E-------IWHW---------TGFFVVISIAAGISALLL 420 (434)
T ss_pred H-------hccc---------HHHHHHHHHHHHHHHHHH
Confidence 8 3444 444466666665544433
No 153
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=5e-12 Score=118.29 Aligned_cols=130 Identities=18% Similarity=0.246 Sum_probs=104.4
Q ss_pred hhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH-HHHhccchHHH
Q 015847 60 LFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWM 137 (399)
Q Consensus 60 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~ 137 (399)
.....|. +.+++|.+..+ .+++.+...++..++.++.|++.||+|||+.+.++.++..+.. ......++.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAV 330 (405)
T ss_pred hhhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHH
Confidence 3445554 44678999888 9999999999999999999999999999999988877653333 23334556666
Q ss_pred HHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 138 AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+..++.|+..+...+ ..+++.|.+|+++|++++|+.+....+|..++|+++|++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 331 LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777765444444 58889999999999999999999999999999999999998
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=3.1e-12 Score=117.83 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=114.0
Q ss_pred hhHHHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccch-HHHHH
Q 015847 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (399)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~ 139 (399)
...|.+.++ +|.+..+ .++..+...++..++.++.+++.||+|||+.+..+..+.+++.+...+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777665 8988888 999999999999999999999999999999999888888888777777764 88888
Q ss_pred HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+..++.|++.+...+. .+++.|.+|+++|++..++.+....+|..++|.++|.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998887775 8999999999999999999999999999999999999987
No 155
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.35 E-value=1.1e-11 Score=116.80 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=98.8
Q ss_pred hhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 015847 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (399)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (399)
+...+|.+.++.|.+..+ .+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 455677777778888877 88888999999999999999999999999999888877766655443322211122
Q ss_pred HHHHHHhh--hccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 140 ~~r~l~G~--~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.-.+.|. +.....+ ...++.|.+|+++|++++|+......+|+.++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22233333 2222333 47788999999999999999999999999999999999987
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=4.7e-11 Score=107.53 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=131.0
Q ss_pred hhHHHHHHHHHHHhhccccchhhhH-HHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
++.+.......++...+......++ |.+.+..|.+.+. ++++...+.++..+++.+.|+++|| +.|+.+...
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~ 282 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAA 282 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHH
Confidence 3455555556666666666556665 5666778999999 9999999999999999999999999 989988888
Q ss_pred HHHHHHHHHHHhc-cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 119 TASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
..+.++..+.+.+ .++.+..++.-++.|++.+..... ...+++ ..|+.+..+.++.....++|..+|..++|.+.+
T Consensus 283 ~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~- 360 (394)
T COG2814 283 LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD- 360 (394)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 7777777666555 455556666666777765554443 666666 556889999999999999999999999999999
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHh
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
++++....+..+++.++.+...+.
T Consensus 361 ---------------~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 361 ---------------ALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred ---------------hhchHHHHHHHHHHHHHHHHHHHH
Confidence 555666667777777776655444
No 157
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=3e-11 Score=116.30 Aligned_cols=179 Identities=15% Similarity=0.036 Sum_probs=108.5
Q ss_pred cchhhhHHHHHHHhccCccccchh-----hh-hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIG-----SY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (399)
+......|.+.++.|.+..+.... .. .........++..++.++.++++||+|||++++++.++.+++.++.++
T Consensus 305 y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 305 YGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred HccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 344455787778888875431000 00 011233444566678889999999999999998888777776655554
Q ss_pred cc----hHHHHHHHHHHHhhh-ccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccc
Q 015847 132 SV----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (399)
Q Consensus 132 ~~----~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw 206 (399)
.. +...+...-+...++ .+.....+.+.+|.+|.+.|++++|+.+....+|..++|.+.+++.+..+. ..|+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~ 461 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDP---TKGY 461 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccc---cccc
Confidence 32 111111111112222 222233477789999999999999999999999999999999999872210 0000
Q ss_pred cccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCC
Q 015847 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (399)
Q Consensus 207 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (399)
.. ..++...+.+.++..++..+..+++||++.+
T Consensus 462 ~~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 462 PT---GIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred cc---cccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 00 1123334455555555555555677987654
No 158
>PRK10504 putative transporter; Provisional
Probab=99.31 E-value=3e-11 Score=115.50 Aligned_cols=147 Identities=16% Similarity=0.188 Sum_probs=114.6
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
+.......++............|++.+ .+|.++.+ .++......++..++.++.|++.||+|||+++..+..+
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~ 336 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG 336 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 334444444445544555566776665 57888888 88888888888888889999999999999999988887
Q ss_pred HHHHHHHHhcc---chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 122 VVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 122 ~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++..++..+. ++.+.+.+..++.|++.+...+ ...+..+..|+++|+.++++.+....+|..+|+.+++.+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 337 LALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776655543 3344445566777887777665 48888899999999999999999999999999999999877
No 159
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=5e-11 Score=110.61 Aligned_cols=177 Identities=18% Similarity=0.228 Sum_probs=123.7
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
+.+.......+.+.+..+...+.++-|++..+ .-+......+...+..+++..+.||+|||+.++.+..+..+.
T Consensus 275 ~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 275 IVVSFAQQFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 33334444446667777777888999999998 889999999999999999999999999999999999988888
Q ss_pred HHHHhccc----hH--HH---HHHHHHHHhhhccc-hhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 126 NTLFGLSV----NF--WM---AVLTRFLLGSLNGL-LGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 126 ~~~~~~~~----~~--~~---l~~~r~l~G~~~~~-~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.+++.... .. |. .+++.++..+..+. ..| .+-+.+|.+|++.|..++++.....-+...+-...-..+.
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665431 11 11 23333444444333 345 4889999999999999999988888887776666666665
Q ss_pred CCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCC
Q 015847 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (399)
Q Consensus 195 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (399)
+ .++-.....+.+...+..+..+..+||++.+..
T Consensus 429 ~----------------~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 429 N----------------VIGPYVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred H----------------HhcchhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 5 111111122333333445666888999976543
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.30 E-value=8.3e-11 Score=112.08 Aligned_cols=136 Identities=18% Similarity=0.271 Sum_probs=121.1
Q ss_pred hccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc
Q 015847 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (399)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (399)
++....+...+|.+. +++|.+... .|++.++..+|.+++.+..+++.+|+++++.+..+.++.+++.+..+++
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc
Confidence 333444556678665 568888888 9999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 133 VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 133 ~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
++.+..++..++.|++.....+ ..+.+.+..|++.||++++++.+....+..+|.++.|.+.+
T Consensus 305 ~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998777666 48899999999999999999999999999999999999998
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.30 E-value=5.9e-11 Score=111.86 Aligned_cols=177 Identities=13% Similarity=0.170 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCc--hhhHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGT 119 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~ 119 (399)
+....++.++..-+.+.+......+ .+++|.+..+ ...+..+..+..+++++++|++.||+|.| +++.++.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l 356 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL 356 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 3334444444444445455555444 4689999999 88888899999999999999999999999 8888888
Q ss_pred HHHHHHHHHHhc--------cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 120 ASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 120 ~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
+++.+.++...+ .++.+.+.+.-++.|+..|...+. .++.+|..|+++.+..+|++....-....+||++-
T Consensus 357 ~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 357 ILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 877655554444 577888999999999998888875 99999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCC
Q 015847 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (399)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (399)
|.+.+..+ +.|..+....++.++.++....+++++
T Consensus 437 g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 437 GLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 99998432 134444666666666666666666543
No 162
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.28 E-value=4.8e-10 Score=107.35 Aligned_cols=153 Identities=12% Similarity=0.143 Sum_probs=113.4
Q ss_pred HHHHHHhccCccccchhhhhhHHHH-HHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH---hcc-chHHHHH
Q 015847 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (399)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (399)
|++.+++|.+..+ .++... ...++..++.++.|+++||+|+|+.+.++.++.++..+.+ +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4445778999998 999874 5568999999999999999999988777666555443322 232 3555555
Q ss_pred HHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhh
Q 015847 140 LTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~ 218 (399)
..-++..++.|...+ ..++..+..+++.+++.+++.+...++|..+++.++|++.+ .. +|...
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~-------~~---------G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE-------AH---------GWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hh---------ChHHH
Confidence 555665655555445 48888999999999999999999999999999999999998 33 44445
Q ss_pred HHHHHHHHHHHHHHHHhcccC
Q 015847 219 CLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (399)
+.+.++++++.++....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 577777777766666666654
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.28 E-value=2.5e-11 Score=113.33 Aligned_cols=132 Identities=16% Similarity=0.103 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~ 162 (399)
.|...+...+...++.+..|++.||+|||+.+.++.++.++...+...+++.+.+++.+++.|++...... ...+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888889999999999999999999999999998888888878888999888899999988655544 36677788
Q ss_pred ccchhhhHHHHH-HHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHH
Q 015847 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (399)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 231 (399)
.+++.+++..+. .+....+|..++|.++|++.+ .++|..++.+.++..++..+
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~----------------~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD----------------SIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH----------------hcccHHHHHHHHHHHHHHHH
Confidence 888888887766 678899999999999999998 33455555666666555433
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=2.5e-11 Score=108.13 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=124.3
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc--CCchhhH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVII 116 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~l~ 116 (399)
.+.++.++++.++.++.+..+.-+.| ++.|+.|.|..+ .++..+.+-.+.+.+.+++|+++||+ |||.+..
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~ 324 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA 324 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence 35566788888888999999999999 556778999999 99999999999999999999999996 6776654
Q ss_pred HH-HHHHHHHHHHHhccc--hHHHHHHHHHHHhhh-ccchhhHHHHHhhhccchhhhHHHHHHHHHHHH-HHhHHHHhhh
Q 015847 117 MG-TASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGG 191 (399)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~i~~ 191 (399)
+. .++..++.+..-+++ |++...++-++.|+. .|...-......|..|++--|++.|+.+.+..+ |...+....+
T Consensus 325 ~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 325 LIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 44 444444445555554 457777777888875 444444577789999999999999999888888 8888988889
Q ss_pred hhcCCCCCCCCcccccccc
Q 015847 192 FLAQPAEKYPNLFSSESLF 210 (399)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~f 210 (399)
++.| .+||...|
T Consensus 405 ~i~d-------~~gW~g~F 416 (448)
T COG2271 405 YIAD-------TWGWDGGF 416 (448)
T ss_pred eeEe-------cCCCcchH
Confidence 9988 46666555
No 165
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=3.4e-11 Score=112.17 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=100.8
Q ss_pred HHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH
Q 015847 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (399)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (399)
++............+.+.+|.|.++++ +|++...... ...++.++.|++.||+|+|+.+..+..+.++..+..
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~ 291 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW 291 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 333333444445666677788999998 9998887764 666778999999999999999888776653332222
Q ss_pred hc------cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccc-hhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 130 GL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 130 ~~------~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.. .++...+.....+.+++.+...+. .+.+.+..++ +++++.++..+...++|..+||.++|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 292 FAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 233344444455566666666554 7777777765 889999999999999999999999999998
No 166
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.27 E-value=1.1e-10 Score=112.00 Aligned_cols=133 Identities=17% Similarity=0.141 Sum_probs=99.3
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccc--
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-- 133 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-- 133 (399)
+.+......|.+.++.|.+... ..+......++..++.++.|+++||+|||++++.+.++.+++.++++...
T Consensus 286 ~~~~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 286 GINVVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred ChhHHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc
Confidence 3444455668888889988776 67777778888899999999999999999999999998888877665421
Q ss_pred h-HH-HHHHHHHHHhhhccc-hhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 134 N-FW-MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 134 ~-~~-~l~~~r~l~G~~~~~-~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
+ .+ ....+.++.+.+.+. ..+. .+++.|.+|+++|++++|+......+|..+++.+.+.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1 11 222233344443332 3454 899999999999999999999999999998877766554
No 167
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.27 E-value=2.3e-11 Score=116.07 Aligned_cols=154 Identities=10% Similarity=0.056 Sum_probs=99.1
Q ss_pred hhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCc-------hhhHHHHHHHHHHHHHHhc
Q 015847 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGL 131 (399)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~ 131 (399)
....+|.+ .+++|.+..+ .+.+.+.+.++..++.++.|+++||+||| ....+..++.++..++...
T Consensus 271 ~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34455544 5678999888 99999999999999999999999999865 2333333333344445555
Q ss_pred cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccc
Q 015847 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (399)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f 210 (399)
.++.+..++..++.+++.+.... ..+++.+.. +++|+...|+.+.+..+|+.++|.+.+ ..+
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~--------------- 407 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS--------------- 407 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC---------------
Confidence 66665555555566665433333 355666654 478999999987776777777666543 111
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHhcc
Q 015847 211 GKFPYFLPCLCISLFAFGVTIAAFWLP 237 (399)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
..+|...+.+.+++.++..+..++++
T Consensus 408 -~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 -SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 12344445666666666666555554
No 168
>TIGR00898 2A0119 cation transport protein.
Probab=99.26 E-value=3.3e-11 Score=116.32 Aligned_cols=137 Identities=20% Similarity=0.119 Sum_probs=103.5
Q ss_pred HHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchH--HHHHHHHHHHhhhccchhh-HHHHHhhhcc
Q 015847 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFR 164 (399)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~ 164 (399)
.....+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.+...+ .+.+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334456667788899999999999999999999888888777766543 4444445555665555445 4889999999
Q ss_pred chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCC
Q 015847 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (399)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (399)
++.|++++|+.+....+|.+++|.+.+ +.+ .++..++.+.++..++..+..+++||+..+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 500 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKGV 500 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999999999999999998 432 223445566666666666667788887643
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=99.25 E-value=9.7e-11 Score=110.69 Aligned_cols=137 Identities=19% Similarity=0.170 Sum_probs=99.0
Q ss_pred hhccccchhhhHHHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHH-HH-
Q 015847 53 TALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LF- 129 (399)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~- 129 (399)
..........+.|.+.++ +|.+..+ .++....+.++..++.++.|+++||+|||+++..+.++.++..+ ..
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344445566677876654 7998888 88888888999999999999999999999998876554433221 11
Q ss_pred --hccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHH-HHHHHHHHhHHHHhhhhhcC
Q 015847 130 --GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 130 --~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~i~~~l~~ 195 (399)
...++.....+..++.|++.+...+. ..++.|.+|+++|++++++. +.+..+++.++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 12234444444455566666665553 77889999999999999986 44444567889999999988
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=2.5e-11 Score=112.33 Aligned_cols=153 Identities=16% Similarity=0.143 Sum_probs=105.7
Q ss_pred HHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC-chhhH-HHH-
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVII-MGT- 119 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~l~-~~~- 119 (399)
+.+.+..++............|.+. +++|.+..+ .++..+...++..++.++.|+++||.++ |+... ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~ 292 (379)
T TIGR00881 219 WYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFM 292 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHH
Confidence 3344444444444455566666554 667998888 9999999999999999999999998643 33222 222
Q ss_pred HHHHHHHHHHhc--cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 120 ASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 120 ~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
....++...... ..+.....+..++.|.......+ ...+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~- 371 (379)
T TIGR00881 293 ALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD- 371 (379)
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH-
Confidence 222222222222 23455555666677765433333 47788999999999999999999999999999999999998
Q ss_pred CCCCCCccccccc
Q 015847 197 AEKYPNLFSSESL 209 (399)
Q Consensus 197 ~~~~~~~~gw~~~ 209 (399)
..||+..
T Consensus 372 ------~~g~~~~ 378 (379)
T TIGR00881 372 ------GFGWAGA 378 (379)
T ss_pred ------hhccccc
Confidence 5666543
No 171
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.25 E-value=1.3e-10 Score=106.77 Aligned_cols=141 Identities=13% Similarity=0.032 Sum_probs=107.9
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-CCchhhHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNT 127 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~ 127 (399)
..++..........++|.+.++.|.+..+ .+...+...++..++.++.|+++||+ +||+.+..+.++.+++.+
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence 33333444445566778787888998888 99999999999999999999999999 566777777777777776
Q ss_pred HHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
.+.+.++..... ..++.|++.+...+. .+.+.+..+ +++++...++.+....+|..++|.+.|++.+.
T Consensus 279 ~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 279 GLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655433222 346788888887774 666665554 56778999998888899999999999999984
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.23 E-value=1.9e-11 Score=115.70 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=95.2
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHhhhccchhhH-HHHHhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~ 161 (399)
.+++.+...++..++.+++++++||+|+|+++..+.++.+++.+...+. ++.+.+++..++.|++.+...+. .++++|
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVAD 338 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6777788899999999999999999999999999988888877766654 45666777778888888776664 888888
Q ss_pred hcc-------chhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 162 IFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 162 ~~~-------~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+ ++++|..+|+.+....+|..+++.+.|.+.+
T Consensus 339 ~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 339 TVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 865 5567999999999999999999999999987
No 173
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.22 E-value=2.7e-08 Score=90.31 Aligned_cols=275 Identities=13% Similarity=0.052 Sum_probs=166.6
Q ss_pred HHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHH
Q 015847 65 YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (399)
Q Consensus 65 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 143 (399)
|++.+. .|+++.|- ..-+.-...-.+.+..++...+.|..|.|++++++.+...+...+.-+.++...+.+..+
T Consensus 28 ~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred HHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 344443 67777762 223333344455667788889999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHH
Q 015847 144 LLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (399)
Q Consensus 144 l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 223 (399)
.-|++.+.-.+.++++--..|+++--++.+...+..-+|..++.++|-.+... + ..++.....+..
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~--------~------~~sy~~L~~isl 168 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF--------G------GVSYFQLNYISL 168 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c------CCCHHHHHHHHH
Confidence 99999888666689998888988888999999999999999999999988751 1 333444445555
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCCc---c---chhhhhhhhhhhhh---hhccc-----------cCCcccccccccch
Q 015847 224 LFAFGVTIAAFWLPETLHRHNDDDDS---C---DVSYDALESASAEV---KEEEG-----------REATPKKSLLKNWP 283 (399)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~---~---~~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~ 283 (399)
....++++..+++|..++..--+++. . +...+..++..++. .+.+. ...++.++..++|.
T Consensus 169 ~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ 248 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPR 248 (412)
T ss_pred HHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCch
Confidence 54555566667788755422111100 0 00000000000000 00000 01123345567777
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 015847 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (399)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (399)
++.-.+-+.+.........++......+. .. -+-.....|.+-+...+.+.++. +..+++..+..+..-+.++..
T Consensus 249 ll~WSlWWa~atcgy~qv~nYvQ~LW~~v-~~--~~~~~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~ 323 (412)
T PF01770_consen 249 LLLWSLWWAFATCGYYQVINYVQSLWDTV-PP--SDNESVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVF 323 (412)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CC--CCCCcccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHH
Confidence 76655544444444444433333322222 00 12234445666666666666666 366777655665444444433
No 174
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=2.6e-10 Score=107.75 Aligned_cols=135 Identities=12% Similarity=0.064 Sum_probs=89.0
Q ss_pred hccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh--
Q 015847 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG-- 130 (399)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-- 130 (399)
.........++|.+. +++|.+..+ .+...++..++..+++++.|+++||+|||+++.++.++.++..+...
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 333444566777654 567888877 88888888888889999999999999999988776654433332111
Q ss_pred --ccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHH-HHHhHHHHhhhhhc
Q 015847 131 --LSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALGGFLA 194 (399)
Q Consensus 131 --~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~p~i~~~l~ 194 (399)
..++....+..-.+.+...+...+ ...+.+|.+|++.|++++|+.+...+ +.+...|.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 330 LQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 122333222222222233333333 47889999999999999999866544 43555888888664
No 175
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1e-09 Score=98.69 Aligned_cols=147 Identities=21% Similarity=0.318 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc----ccCCchhhH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII 116 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~l~ 116 (399)
+.++.+....+..-++...-..+.+++.++.|++... .+.+-.+..+...+.+|+.|..+| ||||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 5555666666666666677777888889999999887 777777788888899999999999 489988776
Q ss_pred HH-HHHHHHHHHHHhccchH-----------------HHHHHHHHHHhhhc-cchhhHHHHHhhhccchhhhH-HHHHHH
Q 015847 117 MG-TASVVIFNTLFGLSVNF-----------------WMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (399)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~~~-----------------~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~r~~-~~~~~~ 176 (399)
.. .+...++.++..++.++ ..+++...+.-++. -...|+.+++.|...++++.+ +++.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 65 45555666666665432 23344445555554 446678999999998777777 999999
Q ss_pred HHHHHHHhHHHHhhhhh
Q 015847 177 TAWGIGLIIGPALGGFL 193 (399)
Q Consensus 177 ~~~~~g~~~~p~i~~~l 193 (399)
.+.++|+.+|...++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998888643
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.22 E-value=1.5e-10 Score=108.53 Aligned_cols=128 Identities=13% Similarity=0.013 Sum_probs=101.2
Q ss_pred hhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc-----ch
Q 015847 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VN 134 (399)
Q Consensus 61 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~ 134 (399)
....|.+ .+++|.++.+ .++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. ++
T Consensus 235 ~~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 308 (406)
T PRK15402 235 IALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHA 308 (406)
T ss_pred HHHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 3345544 4668888887 8888888888889999999999999999999998888777776665542 35
Q ss_pred HHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 135 ~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.+++..++.|++.+...+. ..... ..++++||+..+..+....+|..+|+.+++.+.+
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 666777788889887776554 44443 3345899999999999999999999999999987
No 177
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.21 E-value=1.9e-10 Score=106.39 Aligned_cols=182 Identities=16% Similarity=0.275 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhc-cCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
++....+..++..........+.+.+.++.| .+... .+.+.+...++-++.-...+++..|+|.|+++.++.+
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3444445556666667777788887888888 66666 7888888888899999999999999999999999999
Q ss_pred HHHHHHHHHhcc-chHHHHHHH----HHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHH-HHHHHHhHHHHhhhhh
Q 015847 121 SVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFL 193 (399)
Q Consensus 121 ~~~~~~~~~~~~-~~~~~l~~~----r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~i~~~l 193 (399)
.+++=..+++.. ++.+...+. ..+.|+..+...++ ..++.+..|++.|+++.++++. ..++|..+|..++|++
T Consensus 282 ~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999988888877 554443333 45689988887775 9999999999999999999855 6789999999999999
Q ss_pred cCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHH-HHHhcccC
Q 015847 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPET 239 (399)
Q Consensus 194 ~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~ 239 (399)
.+ .+|-+..| + |...+.+.+++.++..+ .+++.||+
T Consensus 362 ~~-------~~g~~~~~-~--~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 362 YD-------AFGARGMF-D--WSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HH-------Hhcchhhh-h--HHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 98 45544433 1 33333445554444333 33444443
No 178
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.21 E-value=1.5e-10 Score=109.52 Aligned_cols=174 Identities=11% Similarity=0.032 Sum_probs=106.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 123 (399)
......++............|.+.+ ..|.+..+ .++....+.++..++.++.|+++||+++++....+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~ 328 (438)
T TIGR00712 255 YIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMT 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHH
Confidence 3333334444444455567776665 46888888 8999999999999999999999999975432223332221
Q ss_pred ---HHHHHHhc--cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHH-HhHHHHhhhhhcCC
Q 015847 124 ---IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLAQP 196 (399)
Q Consensus 124 ---~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~p~i~~~l~~~ 196 (399)
++.+.... ..+.+...+..++.|++...... ......|.+|+++|+++.|+.+....+| ..++|.+.|.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~- 407 (438)
T TIGR00712 329 LVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD- 407 (438)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH-
Confidence 22222222 22344333444445543222222 2456789999999999999998877776 5789999999998
Q ss_pred CCCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCC
Q 015847 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (399)
Q Consensus 197 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (399)
..||+. .+.+.++..++. +.....+||.+
T Consensus 408 ------~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 408 ------FFGWDG---------GFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred ------hccchH---------HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344433 335544444443 34455566643
No 179
>PRK10054 putative transporter; Provisional
Probab=99.21 E-value=1e-10 Score=109.05 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=94.3
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHhhhccchhhH-HHHHhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~ 161 (399)
.+++.+...+.....+++.|++.||+++|+.+..+..+..++.....+. ++.+.+++..++.|++.+...|. .+.+.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7788888888777888899999999999999999988888887777654 56777777888999988877775 889999
Q ss_pred hccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..|++.|++.++..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988665 556899999999999998
No 180
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=4.6e-10 Score=104.60 Aligned_cols=125 Identities=11% Similarity=0.004 Sum_probs=98.5
Q ss_pred HHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHH
Q 015847 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (399)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 143 (399)
.|.+.+++|.+..+ .+.....+.++..++.++.|++.||.+++..+....+......++....++.+.+.+..+
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 36777888999988 999999999999999999999999965443334333334444455555667778888889
Q ss_pred HHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 144 l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.|++.+...+. .+++.+..| +++++..+.......+|..+||.++|.+.+
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988887775 778888887 556677788888889999999999999998
No 181
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=5.6e-10 Score=94.08 Aligned_cols=125 Identities=20% Similarity=0.273 Sum_probs=100.1
Q ss_pred HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHH-HHHHHHHhccchHHHHHHHHHH
Q 015847 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV-VIFNTLFGLSVNFWMAVLTRFL 144 (399)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~r~l 144 (399)
.+++++|+|+.+ .+-+.+......++.+++.|.++||+|++...+.+..+. .++-....++ .+.=++...+
T Consensus 290 fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~ 361 (459)
T KOG4686|consen 290 FFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTF 361 (459)
T ss_pred HHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHH
Confidence 567899999998 888998888888999999999999999998777665443 3443443332 2223345567
Q ss_pred HhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 145 ~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
.|......... +..++...|+++.|++.|..+...++|-++-|+++|++.+..+
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 78877766664 8888999999999999999999999999999999999999554
No 182
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.18 E-value=4.4e-11 Score=104.29 Aligned_cols=129 Identities=20% Similarity=0.267 Sum_probs=96.0
Q ss_pred HHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhh-ccchhhHHHHHhhhccchhhh
Q 015847 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQA 169 (399)
Q Consensus 91 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~ 169 (399)
..+....|.++.+++.||+|||+.+..+.+++++..++...+.+-....+.-+..-+. .+.+.+++.|..|++|.+.|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 3556678899999999999999999999999999988877765433222222222222 455666799999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcc
Q 015847 170 LGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (399)
Q Consensus 170 ~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
++.|.-..+..+|+++.|+++ ...+ -.-..+..+...+++++.++..++|
T Consensus 470 tgvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeee
Confidence 999999999999999999999 3332 2223444566666666667767776
No 183
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.17 E-value=2.2e-10 Score=108.75 Aligned_cols=175 Identities=15% Similarity=0.226 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC--CchhhHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGT 119 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~ 119 (399)
.++...+...+..++.......+|.+.++.+.++.+ .+.+.++..+...++.++.|+++|+.. ++.+..++.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~l 372 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTL 372 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHH
Confidence 344555666667777777788889999999999999 999999999999999999999999988 456677788
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~ 198 (399)
+..+++.+.++++++++.++..-++.|++.|..... ...+.|..+.++-..+.|+.....+++..+||+++|.+.+.++
T Consensus 373 l~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 373 LIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC
Confidence 888888889999999999999999999999998886 5689999999999999999999999999999999999988433
Q ss_pred CCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcc
Q 015847 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (399)
Q Consensus 199 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
+ |...+..+++..++....++..|
T Consensus 453 ~---------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 N---------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred C---------------eeeehhhcChHHHHHHHHHHHhH
Confidence 2 33344666666666666666555
No 184
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=1.1e-09 Score=93.34 Aligned_cols=132 Identities=14% Similarity=0.195 Sum_probs=108.6
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc---
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--- 132 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--- 132 (399)
..+.+..+.|.+.+++|+|.+| ...+.++-.+|..+ .++.|.+.|++|+|.++.+|.+...++..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4566778889999999999999 99999999999876 5889999999999999999999999998777652
Q ss_pred ----chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 133 ----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 133 ----~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++|.+.+..++.|.+.+.... +.....+.|| ++||++.|+.-...++++.+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 4677777777777777666555 4566668887 589999999999999998887777666654
No 185
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=6.8e-10 Score=103.14 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=91.6
Q ss_pred HHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc-cchHHHHHHHHH
Q 015847 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (399)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 143 (399)
|.+.+.+|.++.+ .++..+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555668999888 999999999999999999999999999999999888887777655543 455555555666
Q ss_pred HHhhhccc-hhhHH-HHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 144 LLGSLNGL-LGPIK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 144 l~G~~~~~-~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+.+.+... ..+.. ....+..+++.++.+. .+....+|..+||.++|++.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHH
Confidence 66665433 33343 3444555555565543 366788999999999999987
No 186
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=6e-10 Score=99.97 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=109.2
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHH---hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
+.+....+..++..........+.+.+.++ +|.++.+ .+...+.+..+..++.++.+++.||+|+||.+.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 334444444554444556666777766643 5888888 9999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+..+.+++.++....++...+ ..-++.|++.+...|. .+...+..|++ .+++.++. .+..+|+.++|.+.|.+.|
T Consensus 214 ~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 214 NAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 888887777666555544333 3455788888887775 88888887753 44556665 5667999999999999998
No 187
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.14 E-value=6.4e-10 Score=106.19 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhh----
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI---- 115 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l---- 115 (399)
+.++...+..+...........++|.+. +++|.+..+ .++..++..++..++.++.|+++||+++|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~ 334 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTA 334 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 3445555666666666666677788554 668999988 99999999999999999999999998754321
Q ss_pred ----HHHHHHH--HHHHHHHhc-cchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHH
Q 015847 116 ----IMGTASV--VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (399)
Q Consensus 116 ----~~~~~~~--~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 187 (399)
..+.... ++..+.... ..+....++.-.+.+.+.+...+. .....|..| +.+|...++.+....+|+.++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 335 ARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111111122 234444444444444444443343 445556665 5899999999999999999999
Q ss_pred HhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcc
Q 015847 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (399)
Q Consensus 188 ~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
.+.+.+.+.. + ...|...+.+.++..++..+.....+
T Consensus 414 ~l~g~~~~~~-------~------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 414 TLAGNILSQD-------S------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HhhheeeCCC-------C------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999888621 1 11245555776666666555544443
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.14 E-value=3.2e-10 Score=105.89 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=104.3
Q ss_pred hhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc-ccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 015847 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (399)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (399)
....|.+.++.+.++.+ .+++.+...++...+..+.+++.| |++.|+.+..+.++.+++.++.++.++.+.+.
T Consensus 228 ~~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34567766666556666 888888877776666666666665 46667777788888888887887888888777
Q ss_pred HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
+...+.+++.+...|. .+++.|..|+++||+++|+.+....+|..+||.++|++.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 7778888887777675 88999999999999999999999999999999999999983
No 189
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.13 E-value=6.1e-10 Score=99.57 Aligned_cols=161 Identities=14% Similarity=0.174 Sum_probs=130.2
Q ss_pred cchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHH
Q 015847 58 SSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (399)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (399)
+.+......+. .++|++..+ ...+.....+..+++++++|++.||+|.|+++..+.++..+.++..-+.....
T Consensus 269 ~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~ 342 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGEL 342 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccH
Confidence 33444444444 499999999 99999999999999999999999999999999999999998888777777777
Q ss_pred HHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcc
Q 015847 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (399)
Q Consensus 137 ~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~ 215 (399)
.+.++-.+.|...|..+. +.++.++..|+++-++.+|+++.....+..+||.+-+.+.+.+++ -
T Consensus 343 ~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~---------------~ 407 (438)
T COG2270 343 DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS---------------S 407 (438)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc---------------h
Confidence 777778899998888777 599999999999999999999999999999999999999884322 2
Q ss_pred hhhHHHHHHHHHHHHHHHHhcccC
Q 015847 216 FLPCLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~e~ 239 (399)
+..+....++..+.++....+|++
T Consensus 408 r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 408 RAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhHHHHHHHHHHhhHhhEEeecCC
Confidence 333355555555555666666654
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=7.1e-10 Score=103.98 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=99.2
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHh--ccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchh-hHHHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGTA 120 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~ 120 (399)
+......++.......+...+|.+.+++ +.+..+ .+...+...++..++.++.|+++||++||+. +....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~ 318 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYL 318 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHH
Confidence 3344445555555666778889888775 556666 8899999999999999999999999997774 343443
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
...++.++....++....+.+-.+.+++.....+. .....|.+|+++|++++|+.+....+|+.++|.+.+.+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 319 FAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 44433322222223222222222223332222333 4555788999999999999999999999999999999998
No 191
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.12 E-value=6.8e-10 Score=99.22 Aligned_cols=150 Identities=18% Similarity=0.199 Sum_probs=114.7
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
.++.+.+++.++...-+.-.+...+| ++.++|+.++.+ .|...+.+.+...+..+..|+++||+|.+|++.+.
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 34556666666666666666677777 667889999999 99999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcc-------chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 119 TASVVIFNTLFGLS-------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 119 ~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
...++++.....+. .+....+...+..++..|.-.. ++.++..++|+ +-|.+.|+.....++|+..-|..-
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHH
Confidence 88888888777665 3444444444444444444332 36666777764 778899999999999999999999
Q ss_pred hhhcCC
Q 015847 191 GFLAQP 196 (399)
Q Consensus 191 ~~l~~~ 196 (399)
+...+.
T Consensus 370 g~~~~~ 375 (417)
T COG2223 370 GVSLDL 375 (417)
T ss_pred HHHHHh
Confidence 988873
No 192
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=5.1e-10 Score=104.71 Aligned_cols=149 Identities=14% Similarity=0.169 Sum_probs=99.9
Q ss_pred HHHHHHhccCccccchhhhhhHHHHHHH-HHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH---hcc-chHHHHH
Q 015847 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (399)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (399)
+.+.+++|.++.+ .+++.+... ++..++.++.|++.||+|||+.+..+.++..+..+.. ++. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 899886654 5678999999999999999998877776665554333 343 4556555
Q ss_pred HHHHH----HhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCc
Q 015847 140 LTRFL----LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (399)
Q Consensus 140 ~~r~l----~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~ 214 (399)
+.-++ .|++.+...+. ..++.+.+|.+++ +..+...++|...++.++|.+.+ .+|
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~-------~~G--------- 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE-------AYG--------- 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH-------HhC---------
Confidence 55444 34444444443 6677777775554 55555567787767778999998 444
Q ss_pred chhhHHHHHHHHHHHHHHHHhcccC
Q 015847 215 YFLPCLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (399)
|...+...++++++.++.....+.+
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444477777776666555555444
No 193
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.12 E-value=4.5e-09 Score=98.62 Aligned_cols=274 Identities=19% Similarity=0.218 Sum_probs=159.1
Q ss_pred hhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC-----CchhhHHHHHHHHHHHHHHhcc---
Q 015847 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMGTASVVIFNTLFGLS--- 132 (399)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~--- 132 (399)
.+..+.+.+++|+++.+ .....+...+.. ..-++.|.++|-+. ||+.++++.++.+++.+..+..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 34557788999999998 777777777665 35678999999863 5566677777776555555543
Q ss_pred -chHHHHHHHHHHHhhhccchhhH-HHHHhhhcc--chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccc
Q 015847 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (399)
Q Consensus 133 -~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~ 208 (399)
.+.....+.-++..+|.....++ -+...|... ++.||...+.......+|.+++..++|.+.+ ..+.|.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~ 155 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQG 155 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeE
Confidence 24555556667777777776664 888888873 3448888889899999999999999999988 444444
Q ss_pred cccCCcchhhHHHHHHHHHHHHHH-HHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHH
Q 015847 209 LFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (399)
Q Consensus 209 ~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (399)
.| .+.+...++..+. .+..+|..++...+...... ++.+..... .++.....++.++.|.++..
T Consensus 156 ~f---------~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 156 VF---------LISAALPLLMLIVALFLLEERKVRPADEVFSFGK--EEVPCLFGS----FREQLSELWRALQQRAIWQP 220 (433)
T ss_pred Ee---------hHHHHHHHHHHHHHHHhhhhccccccchhhcccc--cccchhhHH----HHHHHHHHHHHHhhhHHHHH
Confidence 44 5555554444434 44444422111111000000 000000000 00111244566777777776
Q ss_pred HH-HHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 015847 288 II-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (399)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (399)
.+ ..++.......-.. -..|..++. ..+.|+++...+.+..+..++.+++.. +....-.+..-|+++.+..++..+
T Consensus 221 ~~~~~~~~~~~~~~~~a-~~fy~~~~~-~~gp~fs~~f~~~~~~vg~~~~l~g~~-~y~~~~~~~~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSA-SSFYFQTDA-LGGPHFSPSFYGTLSIVGSIASLLGIL-LYRKYFSNWSWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHHhccCCCCc-cEEEEEecc-ccccccCHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHH
Confidence 65 33332222111111 011222111 113458999999888777777777764 555555555666666665555443
No 194
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.08 E-value=8.1e-10 Score=106.05 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=115.0
Q ss_pred HHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 47 WIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
.+..++...........+|.+. +.+|.++.+ .++......++..++.++.|++.||+|||+.+.++..+.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Confidence 3344444444444455667555 457999988 999999999999999999999999999999999998888888
Q ss_pred HHHHhc----cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 126 NTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 126 ~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+..+ ..+.+.+....++.|++.+...+ ......+..|+++|+++.++.+....+|+.+|+.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 335 FYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877662 23566677778889998877654 57777788999999999999999999999999999988875
No 195
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.05 E-value=1.8e-09 Score=98.39 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=117.9
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (399)
.|.+.+...+.-++...+..++.+|+|.|+.++++.++.++=..+++++++.+.+.+.+.+.|+-.+..... .-++++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999988887774 9999999
Q ss_pred ccchhhhHHHHHH-HHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHH-HHHHHhcccCC
Q 015847 163 FREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (399)
Q Consensus 163 ~~~~~r~~~~~~~-~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (399)
+|+|..++...+. +...++|..+.+.++|.+.| +.+++..+++.+.+.+.. ++..+.+++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 9999998988885 88999999999999999998 555555557777666654 44456666544
Q ss_pred C
Q 015847 241 H 241 (399)
Q Consensus 241 ~ 241 (399)
+
T Consensus 405 ~ 405 (412)
T PF01306_consen 405 K 405 (412)
T ss_dssp S
T ss_pred c
Confidence 3
No 196
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.05 E-value=1.1e-09 Score=100.73 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHH-HHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
++...+..++............|.+.+++|.+..+ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 33333344444455555667777777778999888 888887665 57789999999999999999999888888
Q ss_pred HHHHHHHHhcc-----------chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHH
Q 015847 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (399)
Q Consensus 122 ~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (399)
.+++..+..+. ++.+.+..+.++.+++.+...+. .+++.|.+|+++||+.+|+.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 77766654432 45577777888899998887775 9999999999999999999877654
No 197
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.04 E-value=4.3e-09 Score=99.33 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.+..+....++............+++.++.--++.. .+.+..+..++..++.+++++++||+|+|+.+..+.+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 4555666667777777777777777776654333355 7888889999999999999999999999999999999
Q ss_pred HHHHHHHHHhccc--hHHHHHHHHHHHhhhccchhhH-HHHHhhhccc-------hhhhHHHHHHHHHHHHHHhHHHHhh
Q 015847 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALG 190 (399)
Q Consensus 121 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~p~i~ 190 (399)
+.+++.++..+.+ |.+.+++..++.|++.+...+. .++++|..+. ++.|..++..+....+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 299 LAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999998888875 8999999999999998887775 8999998873 3458889999999999999999999
Q ss_pred hhhcC
Q 015847 191 GFLAQ 195 (399)
Q Consensus 191 ~~l~~ 195 (399)
+.+.+
T Consensus 379 g~~l~ 383 (428)
T PF13347_consen 379 GLLLA 383 (428)
T ss_pred HHHHH
Confidence 98876
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.04 E-value=2.4e-09 Score=99.80 Aligned_cols=123 Identities=11% Similarity=0.033 Sum_probs=84.6
Q ss_pred hHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHH
Q 015847 63 FLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLT 141 (399)
Q Consensus 63 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 141 (399)
..| .+.+++|.++.+ .+...+...++..++.++.|++.||+|||+.+.++..+..++.++..+.++.+..+..
T Consensus 225 ~~~~~~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK10473 225 TSPVLLMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFG 298 (392)
T ss_pred hCHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334 345678988888 8999999999999999999999999999999999998888888777776655544444
Q ss_pred HHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 142 RFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 142 r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
-.+.+.+.+...+ .....+..|.++|+ +.......++..+++.+++++.+
T Consensus 299 ~~l~~~g~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 299 ITLICAGFSVGFG-VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHHHHHHhH-HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443333222 12223344544443 44445556777777777777776
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.04 E-value=5.2e-10 Score=102.51 Aligned_cols=134 Identities=21% Similarity=0.258 Sum_probs=109.7
Q ss_pred HHHHHhhccccchhhhHHHH-HHHhccC-ccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 48 IIVLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
...+.............|.+ .+++|.+ ..+ .+...+...++..++.++.|+++||+|+|+..........+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 213 IAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILG 286 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 33333344445577777876 7889999 677 899999999999999999999999999988888887777777
Q ss_pred HHHHhccc---hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHH
Q 015847 126 NTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (399)
Q Consensus 126 ~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 187 (399)
.+...+.. +....++..++.|++.+...+. .+++.|.+|+++|+++.|+.+...++|..+||
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 287 ALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 76666543 4466667788899988887775 99999999999999999999999999999987
No 200
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.03 E-value=3e-09 Score=112.95 Aligned_cols=131 Identities=14% Similarity=0.128 Sum_probs=112.9
Q ss_pred chhhhHH-HHHHHhccCcc-ccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHH
Q 015847 59 SLFPFLY-FMIKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (399)
Q Consensus 59 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (399)
.....+| ++.+++|.+.. + .+++.+...++.++++++.|+++||+++|+.+.++.++.+++.++..+..+.+
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLA 323 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHH
Confidence 3444555 44567899888 7 99999999999999999999999999999999999888888888888888888
Q ss_pred HHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 137 ~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+++..++.|++.+...+ ..+++.+..|+++||+++++.+....+|..+++.+++.+..
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 324 SVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999998887666 48999999999999999999999999999888888877653
No 201
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.02 E-value=2e-09 Score=103.51 Aligned_cols=140 Identities=17% Similarity=0.131 Sum_probs=112.3
Q ss_pred HHHhhccccchhhhHHH-HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 50 VLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 50 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
.+.............|. +++.+|.++.+ .|+......++..++.++.|++.||+|+|+.+..+.++.+++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~ 341 (495)
T PRK14995 268 AMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYG 341 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33333333334455564 45568999999 999999999999999999999999999999999888888777665
Q ss_pred Hhc---cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 129 FGL---SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 129 ~~~---~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
... .++.+......++.|++.|...+ ....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 342 l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 342 LAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 24566666778899999888666 57788888999999999999999999999999999988865
No 202
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.01 E-value=3.4e-09 Score=98.49 Aligned_cols=127 Identities=18% Similarity=0.259 Sum_probs=93.7
Q ss_pred hhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc-----c
Q 015847 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----V 133 (399)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~ 133 (399)
.....|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.+++... +
T Consensus 225 ~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG 298 (385)
T ss_pred HHHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445644 4578998888 9999999999999999999999999999999988887777766655442 2
Q ss_pred hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHH-HHHhHHHHhhhhhc
Q 015847 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALGGFLA 194 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~p~i~~~l~ 194 (399)
+...++...++.|++.+...+. .....|..| ++|+++.++.+.... .|...+|.++ .+.
T Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~ 359 (385)
T TIGR00710 299 SWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIH 359 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 3444555567788887776664 777788776 679999999876655 4555555544 443
No 203
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.99 E-value=2e-07 Score=91.26 Aligned_cols=158 Identities=15% Similarity=0.149 Sum_probs=113.2
Q ss_pred hhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc-cCCchhhHHHHHHHHHHHHHHhccch-----
Q 015847 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN----- 134 (399)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~----- 134 (399)
.....++.+.+|.+..+ ...+...+....-+..++.|.++|+ +||++.+.++.++..++.++.++...
T Consensus 8 aiLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 8 TILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred HHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 34445667778888887 7777777777777888999999997 59999999999999999887766421
Q ss_pred ---HHHHHHHHHHHhhhccchhhH-HHHHhhhccch---hhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCccccc
Q 015847 135 ---FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (399)
Q Consensus 135 ---~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~ 207 (399)
....+++-.+..+|.|..-|+ .+...|.++++ +|-..+.++..+.++|+.+++.+.+++.+..+.+..
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~----- 156 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC----- 156 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----
Confidence 123455566667788887775 89999999754 467788888999999999999999988752111000
Q ss_pred ccccCCcchhhHHHHHHHHHHHHHHH
Q 015847 208 SLFGKFPYFLPCLCISLFAFGVTIAA 233 (399)
Q Consensus 208 ~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (399)
..+|...+.+.++..++.++..
T Consensus 157 ----~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 157 ----QDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHH
Confidence 1235555566666655554443
No 204
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.99 E-value=1.2e-08 Score=93.97 Aligned_cols=144 Identities=12% Similarity=0.053 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCc---hhhHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK---PVIIM 117 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr---~~l~~ 117 (399)
+.++.+....++.......+..++|.+.++.|.+. + .+...++..+...++. ++++||.+|| +....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIR 261 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHH
Confidence 34455555666666666677788998888877664 3 4555555555555554 6777777543 33332
Q ss_pred -HHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
..++.++.....++.++....++.-.+.+++.....+ .+++.+|.+|++.|+++.|+.+....+|+..+|.+.+.+.
T Consensus 262 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 262 AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3344444444445555544444445556665555545 5889999999999999999999999999999999988776
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.97 E-value=5e-09 Score=111.05 Aligned_cols=147 Identities=13% Similarity=0.088 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
++...+..++..+........+|.+. +.+|.+..+ .|++.+.+.++.++++++.|+++|+.++++.+..+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 33333333333333444555667555 557999888 99999999999999999999999988887776666666
Q ss_pred HHHHHHHHhcc--------------------chHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHH
Q 015847 122 VVIFNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG 180 (399)
Q Consensus 122 ~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (399)
.+++.+..++. ++.+.+++..++.|++.+...+ ..+++.+.+|++.||+++|..+....
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 55555433332 6777788888899998888766 59999999999999999999999999
Q ss_pred HHHhHHHHhhhhhcC
Q 015847 181 IGLIIGPALGGFLAQ 195 (399)
Q Consensus 181 ~g~~~~p~i~~~l~~ 195 (399)
+|..+++++.+.+.+
T Consensus 381 ~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 381 AFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999874
No 206
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=9.2e-09 Score=96.01 Aligned_cols=149 Identities=19% Similarity=0.125 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
++.+.+++.+++.+.....+...+|.+.++ ..+... ......+..+...+..+++|+++||+|+||++.++.+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i 324 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFI 324 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHH
Confidence 344555555555555555556667766544 222222 3333444567778889999999999999999998887
Q ss_pred HHHHHHHHHh-cc-----chHHHHHHHHHHHhhhccchhh-HHHHHhhhccc---------------------hhhhHHH
Q 015847 121 SVVIFNTLFG-LS-----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGL 172 (399)
Q Consensus 121 ~~~~~~~~~~-~~-----~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~---------------------~~r~~~~ 172 (399)
...+...... .. .+++.+.+..+...++.|.... ...++.+++|+ ++-|.+.
T Consensus 325 ~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 404 (462)
T PRK15034 325 FMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAAL 404 (462)
T ss_pred HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHH
Confidence 7766653322 11 2455555555444445555433 36667676663 2567888
Q ss_pred HHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 173 STVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 173 ~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
|+..+..++|+.+-|.+-+...+.
T Consensus 405 G~v~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 405 GFISAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHcccchhhHHHHHHHHH
Confidence 899999999999999887777763
No 207
>PRK11043 putative transporter; Provisional
Probab=98.96 E-value=9.6e-09 Score=96.12 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=96.0
Q ss_pred hhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH---hc--cch
Q 015847 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GL--SVN 134 (399)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~--~~~ 134 (399)
.....|.+.+++|.+..+ .++......++..++..+.+++.||+|+|+.+....+..+++.+.. .. .++
T Consensus 222 ~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (401)
T PRK11043 222 WLTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS 295 (401)
T ss_pred HHHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 344567777888998888 8888888888889999999999999999987665554444433222 12 345
Q ss_pred HHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 135 ~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.+++...+.|++.+...+. .+...|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 555556667777777776664 666667765 679999999998888888888888888876
No 208
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.96 E-value=1.9e-08 Score=93.80 Aligned_cols=122 Identities=13% Similarity=0.095 Sum_probs=99.6
Q ss_pred HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Q 015847 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (399)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 145 (399)
...+.+|.++.+ .|++.+...++..++++..+++.||.++|+++..+.. .++..+..++.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 445668999988 9999999999999999999999999999988887753 344444555667777777777889
Q ss_pred hhhccchhh-HHHHHhhhccchh-hhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 146 G~~~~~~~~-~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
|++.+...+ ..+.+.|..|++. +|++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998777665 5777888766654 799999999999999999999998774
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=98.95 E-value=1.6e-09 Score=102.90 Aligned_cols=147 Identities=16% Similarity=0.145 Sum_probs=106.0
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
+....+..++............|++.+ .+|.+... .++......++..++.++.+++.||+|+|+++.++.++
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~ 303 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALL 303 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 333333344444433344444554433 45654433 44444444677788999999999999999999999988
Q ss_pred HHHHHHHHhccc--hHHHHHHHHHHHhhhccchhhH-HHHHhhhccch-------hhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 122 VVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 122 ~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
.+++.+...+.+ +.+.+++..++.|+|.+...+. .++.+|..|.+ ++|...+..+....+|..+|+.+.+
T Consensus 304 ~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 304 GTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877766643 5667777778889988887664 88888888754 3588999999999999999999999
Q ss_pred hhcC
Q 015847 192 FLAQ 195 (399)
Q Consensus 192 ~l~~ 195 (399)
.+.+
T Consensus 384 ~~l~ 387 (448)
T PRK09848 384 FILG 387 (448)
T ss_pred HHHH
Confidence 8876
No 210
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.94 E-value=6.2e-07 Score=82.97 Aligned_cols=297 Identities=14% Similarity=0.139 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhcc-CccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQI-AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
..+.++...++...+.-+.....+.+..+... +--. .+.....-.+..++.++..|.+.||..|.++...+.+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 34567778888888888888888877666533 2222 4555555566778888999999999999998766654
Q ss_pred HHHHH----HHHHhc----cc----hHHH---HHHHHHHHhhhccchhhHH--HHHhhhc------cchhhhHHHHHHHH
Q 015847 121 SVVIF----NTLFGL----SV----NFWM---AVLTRFLLGSLNGLLGPIK--AYACEIF------REEHQALGLSTVST 177 (399)
Q Consensus 121 ~~~~~----~~~~~~----~~----~~~~---l~~~r~l~G~~~~~~~~~~--~~~~~~~------~~~~r~~~~~~~~~ 177 (399)
..-++ +.+... .+ +.+. +++.-.+.|...-....+. +.=-||. +++.+.+.++.+.-
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 43322 222211 11 1122 2222222222222222222 2223332 34556677777777
Q ss_pred HHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhc-------ccCCCCCCCCCCc
Q 015847 178 AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWL-------PETLHRHNDDDDS 249 (399)
Q Consensus 178 ~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~e~~~~~~~~~~~ 249 (399)
.-.+.-+++|++.|.+.+ ..+......+.++..+..... ++++ |+-..++++++++
T Consensus 157 IDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~ 220 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE 220 (432)
T ss_pred HHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc
Confidence 777899999999999987 344444445555555544332 2222 2211111111111
Q ss_pred cchhhhh-hhhhh-----hhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchh
Q 015847 250 CDVSYDA-LESAS-----AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (399)
Q Consensus 250 ~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (399)
.+...++ .+... +...+.-......++..++.|-+... +...+.++...++...+..|+.+ .|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~------~G~s~~ 293 (432)
T PF06963_consen 221 SSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKS------QGYSPS 293 (432)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHH------CCCCHH
Confidence 1100000 00000 00001111123345566666655544 44444444455677777778877 599999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 015847 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (399)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (399)
..|.+-+...+.++.+. ++.+++.+|+|..|.-.++.....+++
T Consensus 294 ~igi~R~~gav~Gl~gT-~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 294 VIGIFRGLGAVFGLLGT-WVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 99999999999999998 599999999998888777766555443
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.94 E-value=2.5e-09 Score=102.16 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+.+..+....++............+++.+...-+... .+++.+...++.+++.+++++++||+|+|+.+.++..
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 3344444444444444444444445454443333444 6677777778889999999999999999999988887
Q ss_pred HHHHHHHHHhc-----cchHHHHHHHHHHHhhhccchhhH-HHHHhhhcc-------chhhhHHHHHHHHHHHHHHhHHH
Q 015847 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (399)
Q Consensus 121 ~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p 187 (399)
+.+++.+...+ .++.+.+++.-++.|++.+...+. .++++|..+ +++.|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 76665544432 345666777778888887776664 889999865 34456688899999999999999
Q ss_pred HhhhhhcC
Q 015847 188 ALGGFLAQ 195 (399)
Q Consensus 188 ~i~~~l~~ 195 (399)
.+.|++.+
T Consensus 385 ~i~g~~l~ 392 (473)
T PRK10429 385 FFIGVVLG 392 (473)
T ss_pred HHHHHHHH
Confidence 99999887
No 212
>PRK10133 L-fucose transporter; Provisional
Probab=98.92 E-value=9.4e-09 Score=97.04 Aligned_cols=125 Identities=11% Similarity=0.021 Sum_probs=98.3
Q ss_pred hhHHHH--HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHH
Q 015847 62 PFLYFM--IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (399)
Q Consensus 62 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (399)
.+.+.+ .+.+|.++.+ .++....+.++..++.++.|++.||+|||+++..+.++.++..++..+.++... +
T Consensus 279 ~~~~~~l~~~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ 351 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-L 351 (438)
T ss_pred HHHHHHHhhhcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-H
Confidence 344433 3467999999 999999999999999999999999999999999888877777666655555432 4
Q ss_pred HHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 140 ~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..-.+.|++.+...|. .+...|..|+ +.+.+.++... ..+|+.++|.+.|.+.+
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 4567889998888885 8888888775 45677777754 44788899999999987
No 213
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.91 E-value=1.6e-08 Score=93.84 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=85.1
Q ss_pred chhhhHH-HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh---c-cc
Q 015847 59 SLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L-SV 133 (399)
Q Consensus 59 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~ 133 (399)
......| .+.+++|.++.+ .++..+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..
T Consensus 212 ~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
T PRK11102 212 SFLTAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDL 285 (377)
T ss_pred HHHHcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334445 445668999888 99999999999999999999999999999999888766544332221 1 22
Q ss_pred hHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHH-HHHHHHhHHHHhhh
Q 015847 134 NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGG 191 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~i~~ 191 (399)
+.+...++-.+.+.+.+.... ....+.|..| ++|+++.+..+. ...+|..+++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 286 GFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444444444333 3566777766 789999988754 45577777776654
No 214
>PRK09669 putative symporter YagG; Provisional
Probab=98.89 E-value=3.9e-09 Score=100.08 Aligned_cols=112 Identities=19% Similarity=0.262 Sum_probs=87.5
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHH-hc-cchHHHHHHHHHHHhhhccchhhH-HHHHh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF-GL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~-~~-~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~ 160 (399)
.+.+.....++..++.+++++++||+|+|+.+..+.++.++..+.. .. .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666677788888999999999999999988877665443322 22 356777788888999998887775 89999
Q ss_pred hhccc-------hhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
|..+. +..|..++.......+|..+|+.++|.+.+
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98862 334667788888999999999999999987
No 215
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=1e-08 Score=97.45 Aligned_cols=156 Identities=10% Similarity=-0.033 Sum_probs=117.8
Q ss_pred HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc----------chHHHH
Q 015847 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (399)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l 138 (399)
+.+|.++.+ .|.......++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999999 9999999999999999999999999999999999999998887654321 333344
Q ss_pred HHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchh
Q 015847 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (399)
Q Consensus 139 ~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~ 217 (399)
...-++.+++.+.... ...++.+..|++++|+..++.+...++|..+++.+++.+.+. .|-..-+ ....+.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~-------~g~~~~~-~~~~~~ 426 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET-------IGITCDN-SNNLWL 426 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCccc-ccchHH
Confidence 5556788887777554 699999999999999999999999999999999999999883 3311111 111122
Q ss_pred hHHHHHHHHHHHHHHHHhccc
Q 015847 218 PCLCISLFAFGVTIAAFWLPE 238 (399)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e 238 (399)
...+..+..++.+.....+|+
T Consensus 427 ~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 427 LILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 234444444555555567886
No 216
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.3e-08 Score=93.92 Aligned_cols=174 Identities=13% Similarity=0.205 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCc--------h
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--------P 113 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr--------~ 113 (399)
++.+++..+....+...+...+|.+. +-+|.+..+ .|+..++..+...+..+++|.++||.-+| |
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 44677888888888888999999555 568999999 99999999999999999999999987552 2
Q ss_pred -hhHHHHHHHHHHHHHHhccch-HHHHHHHHHHHhhh-ccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHh
Q 015847 114 -VIIMGTASVVIFNTLFGLSVN-FWMAVLTRFLLGSL-NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 114 -~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~-~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
.-.++....++..+..++.++ .....+.-...+.+ .|.... ...-..|. .|+.-+..+|+.+....+.+.++|.+
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 224444555555566666542 11111111222222 222222 12233333 45778999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhc
Q 015847 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (399)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
.+.+.+. + .... |+..|++.+++.++..+...+.
T Consensus 413 vg~~~~~-~---t~~e---------W~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 413 VGIIVTD-N---TREE---------WRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeeEeCC-C---CHHH---------HHHHHHHHHHHHHHhchheeEe
Confidence 9999951 1 1233 4555577777766655444333
No 217
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.82 E-value=7.1e-09 Score=93.46 Aligned_cols=195 Identities=14% Similarity=0.071 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhh--hhhHHHHH-HHHHHHhhhhcccccccccCCchhhHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGS--YAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIM 117 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (399)
+.++..+..+|+.-+..+..+.....+.+++|..+.+++... .......+ ...+++.+-.+...+.|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 344455667777777777778888888898888776633211 12222222 233444577888999999999999999
Q ss_pred HHHHHHHHHHHHhccch----HHHHHHHHHHHhhh--ccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 118 GTASVVIFNTLFGLSVN----FWMAVLTRFLLGSL--NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 118 ~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
|.+++.+..+..+...| -..+++...+..+. .|.......+-+|.+|.+.|++..|+..++.=.|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999988888765 22233333333332 2233334667799999999999999999999999999998888
Q ss_pred hhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 015847 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDD 246 (399)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 246 (399)
++.+.. ++...|.|..+ ++.+.+.++..+..+++||+..+..++
T Consensus 464 ~~t~~~--yp~~~g~~~v~---------~i~~~~~~~gi~~T~l~pEtk~~~lee 507 (538)
T KOG0252|consen 464 YLTDHN--YPPNIGVRNVF---------IILAGCMLLGILFTLLIPETKGKSLEE 507 (538)
T ss_pred Hhhhcc--CCccccchHHH---------HHHHHHHHHhHheeEEeecccccCHHH
Confidence 887733 44444444444 788888888888888899887665443
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.80 E-value=2.5e-07 Score=82.64 Aligned_cols=141 Identities=30% Similarity=0.485 Sum_probs=115.5
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCc--cccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 126 (399)
..+..........+..+.+..+++.+. .. .++..+.+.++..++.++.|.++||+|||+.+..+.....++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 83 (338)
T COG0477 10 AALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGT 83 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHH
Confidence 334444666666777888888877666 35 8999999999999999999999999999988888887655666
Q ss_pred HHHhccch--HHHHHHHHHHHhhhccchhhH-HHHHhhhccc-hhhhHHHHHHHH-HHHHHHhHHHHhhhhhcC
Q 015847 127 TLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 127 ~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~p~i~~~l~~ 195 (399)
+..++..+ .+.+++.|+..|++.+...+. .+++.|..|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 84 LLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665 889999999999998877775 9999999998 789999998877 688899999988888876
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.76 E-value=2.1e-08 Score=92.17 Aligned_cols=141 Identities=22% Similarity=0.333 Sum_probs=119.9
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
..++.+.+...+..++--..++.+-.+.- .|........+-++.-++.+++..|+|+-+++.+++.+..+=.+.
T Consensus 379 ~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~ 452 (618)
T KOG3762|consen 379 VAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLY 452 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHH
Confidence 33344444455555554456787766666 788788888888888899999999999999999999999999999
Q ss_pred HhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHH-HHHHHHHHhHHHHhhhhhcC
Q 015847 129 FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+.+|.|+.+-.-+++|+..+.... +.+|++...||+.|.++.++. ....++|-.+|.+++|.+.+
T Consensus 453 ~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 453 YSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 99999999999999999999888776 499999999999999999998 66889999999999999998
No 220
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.76 E-value=3.1e-06 Score=79.34 Aligned_cols=293 Identities=9% Similarity=0.116 Sum_probs=158.8
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCc-----cccchhhhhhHHHHHHHHHHHhh-hhcccccccccCCch
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKP 113 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~l~dr~Grr~ 113 (399)
.+.++...+..|+..+.++. +-.+.+.+.++. +. +.++-+...+...+. .++.+++++|++|++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 34555555556655555443 344555655532 33 777777776665555 889999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcc-----c--------------------------hHHHHHHHHHHHhhhccchhh-H-HHHHh
Q 015847 114 VIIMGTASVVIFNTLFGLS-----V--------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYAC 160 (399)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~-----~--------------------------~~~~l~~~r~l~G~~~~~~~~-~-~~~~~ 160 (399)
++-.....+.....++++. + +.|...+..+...+-+..... . +++.+
T Consensus 76 lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877766666655555442 1 122333333444443333333 4 89999
Q ss_pred hhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcch--hhHHHHHHHHHHHHHHHHhccc
Q 015847 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF--LPCLCISLFAFGVTIAAFWLPE 238 (399)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~e 238 (399)
|.++.+|-.|-++++..+.++|..+++.+..++.+.....+...+ .|... ....+.++..++.+.+..++.+
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~~~~~~~~~~~~~l~~ 229 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVD------GWHVSLKNLMVIVICSGLAIILLYWWVNR 229 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC------hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888741110000000 11111 1122233333333344444432
Q ss_pred CCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCcc
Q 015847 239 TLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL 318 (399)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (399)
....++...+.++ +++.++.+.......+.++++|.++...+...+++..........-....+. +
T Consensus 230 ~~~~~~~~~~~~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~-----~ 295 (472)
T TIGR00769 230 NVLTDPRSYNPAL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQ-----Y 295 (472)
T ss_pred cccCCccccchhh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----C
Confidence 2211110000000 0000000111223456678899888776666665444433333222222221 1
Q ss_pred ccchh----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 015847 319 NYSTQ----MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (399)
Q Consensus 319 g~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (399)
-+++ -.|.+....++..++.++ +.+++.+|+|-+....+.-++.
T Consensus 296 -p~~~~~~~f~g~~~~~~gi~tl~~~l-~~~~l~~~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 296 -PSPNEYSAFMGDFSTWTGVVSVTMML-LSGNVIRKYGWLTAALITPLVM 343 (472)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHH
Confidence 2332 244455566666766665 4488999988766555444433
No 221
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4.4e-07 Score=79.89 Aligned_cols=151 Identities=17% Similarity=0.110 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-CCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~ 119 (399)
+..+.+.+..-+.....+....++|.+..|.|.|..+ .|++.+...+.....++....+.+|. ++|+..+...
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3445556666667777888899999999999999999 99999999999999999999999965 5777777778
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCC
Q 015847 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~ 197 (399)
.++.++.+.+.+.+.-..+.- -++.|+|.|...+ +..++.+..+ +++-++..++.+....+=..+||.+.|++-|..
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 888888887777664433333 4899999888777 4888888776 455566666667777777789999999999854
Q ss_pred C
Q 015847 198 E 198 (399)
Q Consensus 198 ~ 198 (399)
+
T Consensus 361 g 361 (395)
T COG2807 361 G 361 (395)
T ss_pred C
Confidence 3
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.73 E-value=2.5e-08 Score=92.02 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=84.7
Q ss_pred cchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc--cc-
Q 015847 58 SSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SV- 133 (399)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~- 133 (399)
.......|.+. +.+|.++.+ .++..+...++..++.++.|+++||+|||+.+..+......+..+..+ .+
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVT------AGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP 315 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc
Confidence 34455556454 567998888 999999999999999999999999999998887776666555544433 22
Q ss_pred -hHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHH
Q 015847 134 -NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG 182 (399)
Q Consensus 134 -~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g 182 (399)
+.+...+...+.++..|.... ..+.+.|..| ++||+++|+.+...++|
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 316 LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 555555555555555555444 4677778776 68999999988877665
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.73 E-value=1.3e-07 Score=88.16 Aligned_cols=126 Identities=14% Similarity=0.070 Sum_probs=91.6
Q ss_pred hHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH-HHHHHHHHHHhc--cchHHHH
Q 015847 63 FLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT-ASVVIFNTLFGL--SVNFWMA 138 (399)
Q Consensus 63 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~-~~~~~~~~~~~~--~~~~~~l 138 (399)
..+.+. +.+|.+..+ .++......++..++.++.+++.||++++....... ....+....... ..+.+.+
T Consensus 229 ~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (394)
T PRK11652 229 CSGVLMGAVLGLSSMT------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTL 302 (394)
T ss_pred hChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 334344 448888888 899988889999999999999999998433322222 222222122221 2356667
Q ss_pred HHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 139 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
....++.|++.+...|. .++..|.+| +++++..++.+....+|..+++.+++.+.+
T Consensus 303 ~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 303 LVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 77788889888887775 888888886 578999999999999999999999998875
No 224
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.72 E-value=1.3e-07 Score=88.44 Aligned_cols=143 Identities=12% Similarity=-0.039 Sum_probs=97.5
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
..+..++...........++.+.++.+...+... .+...+.+..+..++.++.+++.||+++|+++.++.++.++.
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~----a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGF----AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 3333444333333445566666555432222211 444566666777889999999999999999999998888888
Q ss_pred HHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+++..+.++... ..+-++.|++.+...|. .+...+..+++.+....++... .+|+++.|.+.|++.|
T Consensus 313 ~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 313 CLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHH
Confidence 888888776554 45556677766665574 9999999987665434444333 3999999999999998
No 225
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.71 E-value=1.2e-10 Score=110.62 Aligned_cols=165 Identities=19% Similarity=0.249 Sum_probs=103.3
Q ss_pred cccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh--c--
Q 015847 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L-- 131 (399)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~-- 131 (399)
+......+.+.+.++.+.+... . ... ...+...++.+....+.||+|||++++.+..+.+++.+..+ .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~ 339 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNSF-L----ATL---ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFL 339 (451)
T ss_pred cccccccccccccccccccccc-c----ccc---cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445556676777766652 0 222 22344456677777999999999999999988887777664 1
Q ss_pred -cch-----HHHHHHHHHHHhhh-ccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCc
Q 015847 132 -SVN-----FWMAVLTRFLLGSL-NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (399)
Q Consensus 132 -~~~-----~~~l~~~r~l~G~~-~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~ 203 (399)
.++ ...+. .-.+.... .....+ ...+.+|.+|.+.|+++.++......++..++|.+...+.+.
T Consensus 340 ~~~~~~~~~~~~i~-~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~------- 411 (451)
T PF00083_consen 340 GVSSSSWWSILSIV-FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN------- 411 (451)
T ss_pred ccccccccccccce-eeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 121 12222 22222222 212334 478889999999999999999888889999998888777762
Q ss_pred ccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCC
Q 015847 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (399)
Q Consensus 204 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (399)
.+ .+.......++..+..++..+++||+..+..
T Consensus 412 ~~--------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 412 LG--------GWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred cc--------ccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 11 0112223333344445566788999876543
No 226
>PRK11462 putative transporter; Provisional
Probab=98.63 E-value=2.7e-07 Score=87.71 Aligned_cols=141 Identities=12% Similarity=0.152 Sum_probs=89.3
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
..++.............++.+...-++.. .+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~~~~------~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGTPEV------FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 33334443333344444444443323333 566777888888999999999999999999877555544443333
Q ss_pred Hhcc-c-hHHHHHHHHHHHhhhccchhhH-HHHHhhhcc-------chhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 129 FGLS-V-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 129 ~~~~-~-~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+. . +...+++.-++.|++.+...+. .++++|..+ +++.|..++......-+|..+++.++|.+.+
T Consensus 310 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 310 MFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3232 2 2333444456667766665554 777777766 3334555677778888999999999998886
No 227
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.61 E-value=9.3e-07 Score=84.42 Aligned_cols=112 Identities=15% Similarity=0.098 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHHhhhhccc----ccccc-cCCchhh--HHHHHHHHHHHHHHhc---------cchHHHHHHHHHHHhh
Q 015847 84 AGYVGSSFMFGRALTSVFWG----LVADR-YGRKPVI--IMGTASVVIFNTLFGL---------SVNFWMAVLTRFLLGS 147 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G----~l~dr-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~ 147 (399)
.+++.+...+...+.+++.. ++.|| .+.+... .+|.++.+++.+..++ ..|+++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 67888888888888887755 45554 3334433 7788888888777664 4689999999999999
Q ss_pred hccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
|.....|. .++++|..|++.||+.+|++.....+|..+++.+.....+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998886 9999999999999999999999999999999999887765
No 228
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=5.1e-06 Score=76.98 Aligned_cols=107 Identities=19% Similarity=0.108 Sum_probs=91.0
Q ss_pred HHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccch
Q 015847 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (399)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~ 166 (399)
.++.+....+.+++.+.+.|+.|.|+.++++........+.+-+ .|-+.++++-.+.|+|.+..... ..+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67778888899999999999999999999999998887776644 55777888999999999998885 99999999999
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.+..++.-+....+..+|..+...+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~ 163 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQ 163 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeE
Confidence 99999999888888888887666555443
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.58 E-value=2.3e-07 Score=85.75 Aligned_cols=149 Identities=12% Similarity=0.207 Sum_probs=112.0
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHH-HhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (399)
+.+..+++..++.....+.......++.+ -+|.++.. ..+.......+.+++.+++.++++|+|+|+++.++.
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 34444555555556666666666655543 23444444 667777777777788999999999999999999999
Q ss_pred HHHHHHHHHHhccc--hHHHHHHHHHHHhhhccchhhH-HHHHhhhcc-------chhhhHHHHHHHHHHHHHHhHHHHh
Q 015847 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 120 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
++.+++.++..+.+ +.+.+++..++.+++.+...+. .++++|..+ .+.-|...+......=+|.+++..+
T Consensus 310 ~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999998888765 7888888889999998887775 888888764 2334667777777777888888888
Q ss_pred hhhhcC
Q 015847 190 GGFLAQ 195 (399)
Q Consensus 190 ~~~l~~ 195 (399)
.|+..+
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 888876
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.53 E-value=1.8e-07 Score=83.15 Aligned_cols=160 Identities=18% Similarity=0.193 Sum_probs=116.1
Q ss_pred HHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC--CchhhHHHHHHHHHHHH
Q 015847 51 LCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNT 127 (399)
Q Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~~~~ 127 (399)
...+......-|.++.+ .+.+..+..+ .|...--..+.+.++..+.|.++||++ |......+.+.....+.
T Consensus 280 ~~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 280 TFSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhc
Confidence 33445556667777754 4666655556 888888888999999999999999999 54444555556666667
Q ss_pred HHhccchHHHHHHHHHHHhhhccchhh----HHHHHhhhccch---hhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCC
Q 015847 128 LFGLSVNFWMAVLTRFLLGSLNGLLGP----IKAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (399)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~~~~~~----~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~ 200 (399)
...+++++.++.+-++..+++.+.... ...++-|.-..+ .-|...++...++.+|..+||.++|.+.+
T Consensus 354 ~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~----- 428 (464)
T KOG3764|consen 354 PIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE----- 428 (464)
T ss_pred hhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee-----
Confidence 777899999999988888887665443 333444433333 55788999999999999999999999998
Q ss_pred CCcccccccccCCcchhhHHHHHHHHHHHHHH
Q 015847 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIA 232 (399)
Q Consensus 201 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (399)
++++.+...+.++..++-...
T Consensus 429 -----------~iGF~wl~~iig~~n~iyapv 449 (464)
T KOG3764|consen 429 -----------AIGFEWLMTIIGILNLIYAPV 449 (464)
T ss_pred -----------ehhHHHHHHHHHHHHHHHHHH
Confidence 555665556666666654433
No 231
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.51 E-value=2e-06 Score=67.92 Aligned_cols=109 Identities=21% Similarity=0.208 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhcc
Q 015847 86 YVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR 164 (399)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~ 164 (399)
.-.++......+.+++.+.+.+++|.|+.+++|.+...+-.... +-++.+.++.+-++.|++.+...++ ..++.+..+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34455666667788888899999999999999999988665554 4567888999999999999998886 889999999
Q ss_pred chhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+++|++..+++-.....+.++|.++..++..
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988888888888877765543
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.50 E-value=1.2e-06 Score=78.99 Aligned_cols=136 Identities=21% Similarity=0.166 Sum_probs=113.1
Q ss_pred hccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc-ccCCchhhHHHHHHHHHHHHHHh-
Q 015847 54 ALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFG- 130 (399)
Q Consensus 54 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~- 130 (399)
.+...+...++.++ .+-||.+..+ ...++.....+..++....|++.. |.++|+.-.+|+...+++..+..
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~ 294 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL 294 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 33444455566444 4679999999 889999999999999999998777 67888888888887777665543
Q ss_pred --ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 131 --LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 131 --~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
...+.+.+...-++.|++.|.+.+. .+.+.|...+++.|..+|.+.....++..+|..++|.+.|
T Consensus 295 a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 295 AGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999885 9999999999999999999999999999999999999987
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=7.3e-07 Score=79.69 Aligned_cols=147 Identities=16% Similarity=0.131 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
.+++..-.++.|+..........+++.+.+| .|.++.+ .....+.+..+..+|.++.-++..|+...|.+.+.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~ 308 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFY 308 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3455556666777666677778888877766 7888888 88999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++..+.++..++.++...++ +-++.|+..+...|. .+...+..|+ .....|..-.+..+|+++-|.+.|++.|
T Consensus 309 a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfslal~~l~~--~ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 309 ALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLALKNLGE--HTSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHhccCc--cccccceeeeeheecchHHHHHHHHHHH
Confidence 999999999999999866554 346778888887774 9998999883 3344455566677999999999999998
No 234
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.47 E-value=1.8e-06 Score=81.07 Aligned_cols=147 Identities=8% Similarity=0.006 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHH-HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
.++...+...+............|.+. +.+|.+..+ .++.......+..+++.+.+.+.+|.++++.......
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 292 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ------FAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVP 292 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Confidence 333333333333333344445567555 456899988 8998888888888888888887655444444332222
Q ss_pred HHHHHHHHHh-----ccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 121 SVVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 121 ~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
+..++.++.. ..++++..++..++.++|.+...|. .+. +..-.+..+|++.++.+.....+...++.+++++.
T Consensus 293 ~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~-al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~ 371 (413)
T PRK15403 293 IQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRF-TLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLW 371 (413)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHH-HhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222221 2234444566777888887776664 432 22222334789999998888888899999999887
Q ss_pred C
Q 015847 195 Q 195 (399)
Q Consensus 195 ~ 195 (399)
+
T Consensus 372 ~ 372 (413)
T PRK15403 372 F 372 (413)
T ss_pred H
Confidence 5
No 235
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.47 E-value=2.6e-07 Score=63.92 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=73.6
Q ss_pred hhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc
Q 015847 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (399)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (399)
.++++..+.|.+|.+++|.++|.++ .|++.+..++|+.+|.+...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778899999999999999999 9999999999999999999999999888999999999999999999998
Q ss_pred chHHHH
Q 015847 133 VNFWMA 138 (399)
Q Consensus 133 ~~~~~l 138 (399)
++++.+
T Consensus 78 ~~~~~w 83 (85)
T PF06779_consen 78 HSFWLW 83 (85)
T ss_pred hchHHH
Confidence 887764
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.41 E-value=0.00011 Score=67.12 Aligned_cols=136 Identities=17% Similarity=0.103 Sum_probs=93.0
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~ 162 (399)
.+.+.-+-.+...+..+.+.++.+|+..+.=.....++++++.++.+++++.+.-+++-++.+++.|..-.. ..+ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 455666666677777788888899998665556677788889999999999998888888888887776554 454 445
Q ss_pred ccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHH-HHhcccC
Q 015847 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPET 239 (399)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~ 239 (399)
+++ ...+-+..+.+.++++|+..-..+.+ . ....+........+.++..+. ++.+|++
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~--------------g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-L--------------GLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-h--------------CcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 554 35677888888888888877655553 1 334454455555555444444 3344543
No 237
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.40 E-value=2.8e-06 Score=81.61 Aligned_cols=109 Identities=8% Similarity=-0.035 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHhhhhcc----cccccccCCchhhHHHHHHHHHHHHHHhccch---------HHHHHHHHHHHhhhcc
Q 015847 84 AGYVGSSFMFGRALTSVFW----GLVADRYGRKPVIIMGTASVVIFNTLFGLSVN---------FWMAVLTRFLLGSLNG 150 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~----G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~l~~~r~l~G~~~~ 150 (399)
.+++.+...+...+..++. +++.||++.++.+.+|.++.+++.+..+...+ .++++..+++.|+|.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5666777776666666655 77777777778889999999999888766544 5678889999999999
Q ss_pred chhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhh
Q 015847 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (399)
Q Consensus 151 ~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 192 (399)
...|. .+++.+..|++.||+.+|.+.....+|..++..+...
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99996 9999999999999999998887777777777666653
No 238
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.39 E-value=6.6e-06 Score=79.55 Aligned_cols=181 Identities=14% Similarity=0.148 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
....+.+..+....+.+....+.+.+.+..|.+.+. .+...+..+...++..+...+.||+|||+.++.+...
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHH
Confidence 333455566666667788888888888888776541 2334444445556666668999999999999999999
Q ss_pred HHHHHHHHhccch-------------HHHHHHHH-HHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHH
Q 015847 122 VVIFNTLFGLSVN-------------FWMAVLTR-FLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (399)
Q Consensus 122 ~~~~~~~~~~~~~-------------~~~l~~~r-~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 187 (399)
+.++.++.+.... ...+...- ++..+..+.......+.+|.+|.+.|+++.++......+...+-.
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 9999887775311 11122222 222333333333477889999999999999887665555444333
Q ss_pred HhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCCCCCC
Q 015847 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHN 244 (399)
Q Consensus 188 ~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ 244 (399)
...-.+.+ ..++...| +.+.++..+... ...+++||+.....
T Consensus 449 ~~~~~~~~-------~~~~~~~f--------~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 449 FFFPFITE-------ALGIGGTF--------GYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred HHHHHHHH-------hccccchH--------HHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 33223322 11111111 233344444444 56778899876543
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.36 E-value=6.1e-07 Score=61.68 Aligned_cols=70 Identities=23% Similarity=0.529 Sum_probs=60.4
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
+-...++.....+...|++|.+.++.|++..+ +|.+.++..+...++++++|.++||+++++..+....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34455666677788899999999999999999 99999999999999999999999999998887766544
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.33 E-value=4.4e-06 Score=70.41 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=83.2
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (399)
.+++...+.....|+.-++.+.+|..+.+ +|.+..+......+...+.|.++||-|||+.-+.-++-+.++|+
T Consensus 45 VyslmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi- 117 (454)
T KOG4332|consen 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI- 117 (454)
T ss_pred HHHHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-
Confidence 34455556677788888888999999999 88877777777778888999999999999976665555555544
Q ss_pred HhccchHHHHHHHHHHHhhhccchhhH--HHHHhhhc
Q 015847 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIF 163 (399)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~~~~~~~--~~~~~~~~ 163 (399)
.-.++.+-.++++|++-|++.+....+ .-+++|..
T Consensus 118 TKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 118 TKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 335788899999999999998876554 44567765
No 241
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.31 E-value=5.8e-06 Score=79.11 Aligned_cols=111 Identities=12% Similarity=0.056 Sum_probs=90.5
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchh-------hHHHHHHHHHHHHHH-----hc-----cchHHHHHHHHHHHh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPV-------IIMGTASVVIFNTLF-----GL-----SVNFWMAVLTRFLLG 146 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~-------l~~~~~~~~~~~~~~-----~~-----~~~~~~l~~~r~l~G 146 (399)
.+++.+...+...+..++.+++.||.|+|+. +.+|.++.+++.+.. .+ ..+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4667777777787889999999999999874 677777766665432 11 135777888889999
Q ss_pred hhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
+|.+...|. .+++.+..|++.++.++|++....++|+.+|..++....
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~ 439 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTA 439 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998886 999999999999999999999999999999998887664
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=98.30 E-value=4.4e-06 Score=80.61 Aligned_cols=186 Identities=11% Similarity=0.065 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHh-ccCccccchhhhhhH-HHHHHHHHHHhhhhccccccc---c------
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVAD---R------ 108 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~l~d---r------ 108 (399)
..+++.++...++.......+..-+.++.+.+ |.+.+++ ... +.+...++..+|.+..|.++. |
T Consensus 352 ~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~-----~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r 426 (591)
T PTZ00207 352 TARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA-----LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDR 426 (591)
T ss_pred chhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc-----ceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccc
Confidence 34566777777776666556666677888888 6633221 122 667777777777777777661 1
Q ss_pred cCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHH-
Q 015847 109 YGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG- 186 (399)
Q Consensus 109 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~- 186 (399)
+.|--.+.+..+ +.++.+++++.-....+++..++.|++.|...+. ...++|.|. |+-|+-..+......+|..+-
T Consensus 427 ~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n 504 (591)
T PTZ00207 427 VPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLN 504 (591)
T ss_pred cchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHH
Confidence 222223334444 6666666666544468999999999999998885 999999999 899999998888888888765
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHh
Q 015847 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (399)
Q Consensus 187 p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
-.+.|.+.|.... -.|-....|+..++.++++.+++++...+....
T Consensus 505 ~~l~G~~Yd~ea~---k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 505 RLLYGEWYTQQAD---KLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHHHh---hCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 6677777763210 023345677888999999998888877665433
No 243
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.20 E-value=4.8e-05 Score=71.85 Aligned_cols=185 Identities=15% Similarity=0.041 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHH-H-HhccCccccc---hh-hhhhHHHHHHHHHHHhhhhcccccccccCC-chh
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMI-K-DFQIAKREED---IG-SYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPV 114 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~ 114 (399)
.+..+++..++.-++...+..+...+. + -|+-++.+.. .+ ....+....+.+...+.+++.-++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 344566666666665554444444333 2 2443332110 01 112344445555555777778889999995 677
Q ss_pred hHHHHHHHHHHHHHHhccch---------------------HHHHHHHHHHHhhhccchhhH-HHHHhhhccc--hhhhH
Q 015847 115 IIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQAL 170 (399)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~--~~r~~ 170 (399)
..++.++.+++.....+.++ .+..++...+.|+..+..... ++++++..++ ++.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 78888888877777665432 366777778899988877665 9999999995 45599
Q ss_pred HHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHH-HHHHhcccCC
Q 015847 171 GLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETL 240 (399)
Q Consensus 171 ~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~ 240 (399)
.+|+.+.+..+.+++..+..|.+.+. +|-+ -...+.+.++..+++. ...+.+|+++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~-------~g~~-------~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQL-------FGGG-------NLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-------cCCC-------CeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999888886552 2211 1223355555555544 4456677654
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.19 E-value=2.7e-06 Score=80.46 Aligned_cols=142 Identities=12% Similarity=0.067 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHH-hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc----cCCchhhH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr----~Grr~~l~ 116 (399)
.++...+..++.....+....++|.+.++ .|.+..+ .+.+...+.++.+++.+++|+++|| ..+|....
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFI 347 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34456677777788888899999988887 5688888 9999999999999999999999999 66777666
Q ss_pred HHHHHHHHHH-HHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhh-hHHHHHHHHHHHHHHhHHHHh
Q 015847 117 MGTASVVIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~p~i 189 (399)
....+..+.. +.....++.......-+....+.....++ ....++...++.| -...+....+.+.++.++|.+
T Consensus 348 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~ 423 (495)
T KOG2533|consen 348 VFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL 423 (495)
T ss_pred HHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence 6655554433 44444433333333223333334444453 7777777765444 444444455555555555444
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.18 E-value=3.1e-05 Score=68.69 Aligned_cols=141 Identities=13% Similarity=0.231 Sum_probs=84.2
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc-----ccCCch
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKP 113 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d-----r~Grr~ 113 (399)
.++.+..+.+.+.+.++..+... .+|.+.+.-|+|.++ .+....++.= ...-+.|.++.| |+||||
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grrk 99 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRK 99 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhhhH--HHHHHHHHhhhHHHHHHhhcccc
Confidence 34567778888999999998888 899999888888877 4444333321 123568888999 999988
Q ss_pred hhHHH-HHHHHHHHHHHhcc-----------chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHH
Q 015847 114 VIIMG-TASVVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (399)
Q Consensus 114 ~l~~~-~~~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (399)
.-++- ..+....+...+.. ++...+....++.-+..+....+ -.+.-.+..+++-|-+......+..
T Consensus 100 sWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~ 179 (510)
T KOG3574|consen 100 SWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT 179 (510)
T ss_pred ceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence 65433 33333333333321 23333333334445555554443 5666666677776655554444445
Q ss_pred HHHhHHHH
Q 015847 181 IGLIIGPA 188 (399)
Q Consensus 181 ~g~~~~p~ 188 (399)
.|..++..
T Consensus 180 ~GyfL~~~ 187 (510)
T KOG3574|consen 180 AGYFLGNV 187 (510)
T ss_pred hhHHhhcc
Confidence 55444433
No 246
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.07 E-value=0.0009 Score=63.39 Aligned_cols=247 Identities=15% Similarity=0.143 Sum_probs=129.6
Q ss_pred HHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhcc---------c----------------------hHHHHHHHH
Q 015847 94 GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------V----------------------NFWMAVLTR 142 (399)
Q Consensus 94 ~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~----------------------~~~~l~~~r 142 (399)
+..+...+..+++|+++|.+++-+....+.....++++. + +.|...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344556778999999999998877666666555555431 1 122333333
Q ss_pred HHHhhhccc-hhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC-CCCCCCCcccccccccCCcchhhH
Q 015847 143 FLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPNLFSSESLFGKFPYFLPC 219 (399)
Q Consensus 143 ~l~G~~~~~-~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~-~~~~~~~~~gw~~~f~~~~~~~~~ 219 (399)
++.-+-+.. .... +.+..|.++.+|-.+..+++..+.++|.+++..+..++.+ ... ... .+...|....
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~----~~~----~~~~~~~~~l 222 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRK----SLP----AGVDAWELSL 222 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hcc----cccccHhHHH
Confidence 333332223 3334 8899999999999999999999999999999988888876 111 000 0011122111
Q ss_pred ----HHHHHHHHHHHHHHHhcccCCCCCCCCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHH
Q 015847 220 ----LCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFS 295 (399)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
....+.+++......++.+....++...++.+. ++.++.+.......+.++++|.+..+.+...+++
T Consensus 223 ~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~---------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Yg 293 (491)
T PF03219_consen 223 NSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKK---------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYG 293 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhc---------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 112222222222233332211111000000000 0000001111234556778888887776666655
Q ss_pred hhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 015847 296 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (399)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (399)
..........-....+.+... ..++ .-.|-.....++..++.. ++++.+.+|+|-+....+.
T Consensus 294 i~inLvE~~wK~~lk~~~~~~-~~ys-afmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 294 ISINLVEVVWKSQLKQLYPDP-NDYS-AFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHCCCc-hHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 554444433333333221111 1112 224555666677777776 5788888988876665544
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.03 E-value=6.8e-05 Score=66.73 Aligned_cols=121 Identities=14% Similarity=0.069 Sum_probs=108.0
Q ss_pred HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccC--CchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHh
Q 015847 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (399)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 146 (399)
+.+|.++.| .|-+.+...+...+.+....+..||.. -+-.+..+..+..-..++...++....+..+..+-.
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 678999988 888888888888899999999999987 777888888888888888888899899999999999
Q ss_pred hhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+..+...++ ..++....|+++||..+|+......++-++||+++|.+..
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 988888886 8889999999999999999999999999999999998876
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.99 E-value=4.5e-05 Score=71.70 Aligned_cols=124 Identities=20% Similarity=0.281 Sum_probs=107.6
Q ss_pred HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccc-ccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHH
Q 015847 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 144 (399)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 144 (399)
+....++.++.+ .+...+...+...+++.+.. .+...+|-|+++..|.+.-.+..+..+++++.|+++....+
T Consensus 267 yl~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 267 YLKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 344578899988 88888888888888888776 78888999999999999999999999999999999998888
Q ss_pred HhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 145 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 145 ~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.++.........+.++.+.+++++|+++++.....++...++|.+-+.+..
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 887655555569999999999999999999999999999999998887754
No 249
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.89 E-value=0.00014 Score=70.16 Aligned_cols=193 Identities=18% Similarity=0.166 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHH-HHhccCcc---ccchhhhhhHHHHHHHHHHHhhhhcccccccccCC-chhhH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKR---EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVII 116 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~l~ 116 (399)
.+....+..++.+........+.|... .-|+-+.. + .++....+.++..+++.+.|.+..+++| |+.++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li 384 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITE------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLI 384 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccce------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHHH
Confidence 344444555556555555555666443 34544442 4 6788888888989999999999998887 55556
Q ss_pred HHHHHHHHHHHHHhc--cchHHHHHHHHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 117 MGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
++.+++.+++-+++. .+|....+..-++.|++.|.... ......-..|++.-+.+.++..+.-.+|+.+|..+..-+
T Consensus 385 ~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 777666655444433 34555556667888888776554 466666677889999999999888888888887665333
Q ss_pred cCCC---------------CCCCC--------------------cc------------cccccccCCcchhhHHHHHHHH
Q 015847 194 AQPA---------------EKYPN--------------------LF------------SSESLFGKFPYFLPCLCISLFA 226 (399)
Q Consensus 194 ~~~~---------------~~~~~--------------------~~------------gw~~~f~~~~~~~~~~~~~~~~ 226 (399)
..+. .+.+. .- .-|..| ..+++.+++.....+
T Consensus 465 ~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~siaFG 543 (599)
T PF06609_consen 465 FTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSSIAFG 543 (599)
T ss_pred HHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 2100 00000 00 123445 566788888888888
Q ss_pred HHHHHHHHhcccCCC
Q 015847 227 FGVTIAAFWLPETLH 241 (399)
Q Consensus 227 ~~~~~~~~~~~e~~~ 241 (399)
.+++++.+++++..+
T Consensus 544 ~vaiiaa~fl~d~~~ 558 (599)
T PF06609_consen 544 VVAIIAALFLGDIDK 558 (599)
T ss_pred HHHHHHHHHcCChHH
Confidence 889999899887654
No 250
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.89 E-value=0.00019 Score=49.30 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 015847 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (399)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (399)
..-..++++.....+...++|.|+.+ .|+++.++|.+.++..+..+++. ++.+++.||.++++.......+
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 34556677777777888888888876 79999999999999999999999 5899999999998887665543
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=0.00039 Score=67.51 Aligned_cols=142 Identities=19% Similarity=0.144 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHH---HHHHHHHHhhhccc-hhhHHHHHhh
Q 015847 86 YVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGL-LGPIKAYACE 161 (399)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---l~~~r~l~G~~~~~-~~~~~~~~~~ 161 (399)
.................+...|++|||.....+.++..++++..++..+... ..+...+...+.+. ......+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333344555556688999999999999999999999999888664433 33333344444444 3335889999
Q ss_pred hccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHH-HHHHHHHhcccCC
Q 015847 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETL 240 (399)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~ 240 (399)
.+|...|..+.+..+....+|.+++|.+....... . ...+....+..+. ...+...++||+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------F--PLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------c--ccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999999999999988666431 0 1111122233333 3445558899987
Q ss_pred CCCC
Q 015847 241 HRHN 244 (399)
Q Consensus 241 ~~~~ 244 (399)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 6654
No 252
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.85 E-value=0.00012 Score=64.33 Aligned_cols=128 Identities=16% Similarity=0.123 Sum_probs=98.2
Q ss_pred hhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHH
Q 015847 99 SVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTA 178 (399)
Q Consensus 99 ~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 178 (399)
-.+.=.+.|..-.|++++.-.+.......+.-+.++.+.+-+.-+..|...+.-..-++++-+..+|+++.++.+...+.
T Consensus 59 LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA 138 (433)
T KOG3810|consen 59 LVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAA 138 (433)
T ss_pred HHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHH
Confidence 33444678999999999888888888888888899999999989999988777666699999999999999999999999
Q ss_pred HHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCC
Q 015847 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (399)
Q Consensus 179 ~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (399)
.-.|-..|..++..+.... ..++...-.+......++....+++|..+
T Consensus 139 ~L~g~~~g~vlaQlLvs~~--------------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 139 FLVGKFVGSVLAQLLVSLE--------------TLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHhHHHhHHHHHHhhhc--------------ccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 9999999999998888621 22233333444444444555667777655
No 253
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.72 E-value=0.01 Score=55.15 Aligned_cols=299 Identities=12% Similarity=0.121 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccCCchhhHHH
Q 015847 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
++.+..+.+..++..+.. ..+-.+.+.+.++....+ .+.++=+..-+ +..+..++.+++.++..|.+++-+-
T Consensus 26 ~~kflpl~Ll~f~I~~ny----~~lR~lKDslvv~~~gae---~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 26 LKKFLPLALLFFCILFNY----NLLRSLKDSLVVTRQGAE---SISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHhhhheEeecCcch---hhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 445555555555555543 334445566655532211 15555555555 5667888999999999999998777
Q ss_pred HHHHHHHHHHHhcc---------ch-----------------------HHHHHHHHHHHhhhccchhh-H-HHHHhhhcc
Q 015847 119 TASVVIFNTLFGLS---------VN-----------------------FWMAVLTRFLLGSLNGLLGP-I-KAYACEIFR 164 (399)
Q Consensus 119 ~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~~~~~~-~-~~~~~~~~~ 164 (399)
...+....+++++. ++ .|...+..++.-+=...... . .....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77666666666641 11 13333333333332223222 4 788899999
Q ss_pred chhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCCCCC
Q 015847 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (399)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (399)
.+|-.|-+++++.+.+++..++..+..++.+..... -.-+-....+..+.+..+.+++.+....++.+...+++
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~------~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~ 252 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDAL------ASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDP 252 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 999999999999999999999999998887621100 00000001233334444444444444444322111111
Q ss_pred C-----CCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccc
Q 015847 245 D-----DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (399)
Q Consensus 245 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (399)
. +++++++ ..+..-....+.+.++|.++...+...+++.....+....-.-....+.. .+
T Consensus 253 ~f~~~~~~kk~~~-------------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~--~~ 317 (509)
T COG3202 253 LFYLRAKKKKKKK-------------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPT--TN 317 (509)
T ss_pred chhHHHhcccccc-------------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC--hh
Confidence 1 0000000 00011122345567788887766666555544433332221111111000 00
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 015847 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (399)
Q Consensus 320 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (399)
--..-.|-+....++...+...+.++-+.+|.|=.....+.-++..+
T Consensus 318 ~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~li 364 (509)
T COG3202 318 EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLI 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHH
Confidence 01223344555666665555666788888887755544444333333
No 254
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.64 E-value=0.00096 Score=63.49 Aligned_cols=85 Identities=13% Similarity=0.079 Sum_probs=70.8
Q ss_pred chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHH
Q 015847 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIA 360 (399)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 360 (399)
+.++..........+..++...++|.|+.+. +|+++.+++.+.+.+.....++. +++|++.||+ |||+.+.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHH
Confidence 4456666666667777788888999998876 79999999999999998888887 4899999998 999999999
Q ss_pred HHHHHHHHhHHh
Q 015847 361 GVLTIPLLTSYP 372 (399)
Q Consensus 361 ~~~~~~~~~~~~ 372 (399)
.++..++.+++.
T Consensus 83 ~il~~lg~lll~ 94 (493)
T PRK15462 83 ALLMAIGHVVLG 94 (493)
T ss_pred HHHHHHHHHHHH
Confidence 999888876654
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.46 E-value=0.00081 Score=62.24 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=82.0
Q ss_pred hhhHHHHHHHHHHHHHHhccc---------hHHHHHHHHHHHhhhccchhhH-HHHHhhhccch---hhhHHHHHHHHHH
Q 015847 113 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (399)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~ 179 (399)
|++++|.++.++|.++..++. +.+.++++-.+.++|.|..-|. .++.+|.++++ +|.+.+..+..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888744431 2357888889999999999885 99999999865 5677888889999
Q ss_pred HHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhc
Q 015847 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (399)
Q Consensus 180 ~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
++|..+++.+.+++.+ +++|...|.+.++..+++++....-
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999987 5556666677777666665554443
No 256
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.42 E-value=0.012 Score=54.83 Aligned_cols=72 Identities=17% Similarity=0.272 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHH--hccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
..+.+.+++.++..+.....+|.+.++ -+.|.+|+....++++-.|.=.+ =+.++=...+.|+||||..++-
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlL---WaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLL---WAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHh---hhhhhhhhcccccCCcchhhhH
Confidence 356678888999888887888988888 78888773322223333333221 1222333445599999876554
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0024 Score=59.43 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=79.1
Q ss_pred ccccc-chhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcch
Q 015847 277 SLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPI 354 (399)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 354 (399)
..++. |.++.+...-+.--+.+++....+..|+.....+. +|++.+++..+++.++.-.-+.. .++||++|| +|+|
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~ 92 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTR 92 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchh
Confidence 34443 45667777777778888889999999988875555 78999999988888877777776 499999999 6999
Q ss_pred hHHHHHHHHHHHHHhHHhHHH
Q 015847 355 MVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~ 375 (399)
+.+..+.++.+++.+++....
T Consensus 93 ~tI~lGail~~iGh~~L~~~~ 113 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISS 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999987664
No 258
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.26 E-value=0.0071 Score=55.52 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHH---HHHhccchHHHHHHHHHHHhhhccchhh-HHHHH
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN---TLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYA 159 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~ 159 (399)
..+...+|.+|..++.--...+ |+.+-+++.+--++..+.. ...-+.++.|..++.-+..|+.+|...+ ....+
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I 360 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRI 360 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 7788888888877776533222 4433233222222222222 2233457889888889999998787776 57788
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.|..++++|-.++|....+-++|..++.+++-.+-
T Consensus 361 ~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 361 SEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88899999999999999999999999988886664
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.26 E-value=0.00061 Score=64.22 Aligned_cols=154 Identities=15% Similarity=0.176 Sum_probs=104.5
Q ss_pred cCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc-c---------chHHHHHHHH
Q 015847 73 IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-S---------VNFWMAVLTR 142 (399)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~---------~~~~~l~~~r 142 (399)
.++.. .+.+..+..++..++..+...+--+..-|+++..+.++.++..+.-.. . ++.+..+.--
T Consensus 252 fs~~f------~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~ 325 (433)
T PF03092_consen 252 FSPSF------YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDT 325 (433)
T ss_pred cCHHH------HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhH
Confidence 55555 778888888888888888888777888888888888777665543221 1 1222222333
Q ss_pred HHHhhhccc-hhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccc-cccccCCcchhhHH
Q 015847 143 FLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS-ESLFGKFPYFLPCL 220 (399)
Q Consensus 143 ~l~G~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw-~~~f~~~~~~~~~~ 220 (399)
++..+..+. ..|...+++|..|+...|+.+++.....++|..++..++..+.+. ++. +..| .+.+...+
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~-------~~vt~~~f--~~l~~lil 396 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL-------FGVTRDDF--SNLWLLIL 396 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCcccc--cchHHHHH
Confidence 555554444 566788999999999999999999999999999999999999873 332 1112 22233334
Q ss_pred HHHHHHHHHHHHHHhcccCCC
Q 015847 221 CISLFAFGVTIAAFWLPETLH 241 (399)
Q Consensus 221 ~~~~~~~~~~~~~~~~~e~~~ 241 (399)
+..+..++.+....++|+..+
T Consensus 397 i~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 397 ICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHcCCCch
Confidence 445555555666667776544
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.26 E-value=0.0016 Score=59.82 Aligned_cols=126 Identities=15% Similarity=0.160 Sum_probs=74.8
Q ss_pred HHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC----chhhHHHHHHHHHH-------HHHHhc-cc
Q 015847 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR----KPVIIMGTASVVIF-------NTLFGL-SV 133 (399)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr----r~~l~~~~~~~~~~-------~~~~~~-~~ 133 (399)
...+-.|.+..+ .-++..+...+..+|.++.|.++||+-| -....+..+..+.+ .++... ..
T Consensus 273 ~~~~~~~~~~~~------~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~ 346 (493)
T KOG1330|consen 273 YSYELIGFDHNA------TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS 346 (493)
T ss_pred HHHHHhCCcccc------chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh
Confidence 333444555555 5677777888888999999999999432 11222222222111 111111 22
Q ss_pred hHHHHHHHHHHHhhhccchhh--HHHHHhhhccchhhhHHHHHHHH-HHHHHHhHHHHhhhhhcCCC
Q 015847 134 NFWMAVLTRFLLGSLNGLLGP--IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQPA 197 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~i~~~l~~~~ 197 (399)
+...+.+..++.|........ ..-+..|..|+++|..++++-.. ....|..-+|.+-|.+.++.
T Consensus 347 ~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 347 SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 333333444555654333322 36678899999999999999754 44556666676999998854
No 261
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.04 E-value=0.00075 Score=61.68 Aligned_cols=132 Identities=18% Similarity=0.107 Sum_probs=88.6
Q ss_pred cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCC-chhhHHHHHHHHHHHHHHh-c---c
Q 015847 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVIFNTLFG-L---S 132 (399)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~-~---~ 132 (399)
+.....+......-|.+... .|++.....++..+++.+.|.+.||... |.++++......++..... . .
T Consensus 283 ~~l~~~l~~~l~~sgY~~~~------aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~ 356 (480)
T KOG2563|consen 283 NSLSTLLNLALCPSGYEGVF------AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFL 356 (480)
T ss_pred HHHHHHhhhccccccCCccc------cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 33333343333445666656 8999999999999999999999999874 5555555555555532221 1 1
Q ss_pred chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 133 ~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+.+.++..-.+.|++.....|. .-+-.|..-|..-+...|+.+...++-+.+-..+-+...+
T Consensus 357 ~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 357 GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 23345555667777776666665 7777777766666677888888777777777777777776
No 262
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.97 E-value=0.02 Score=53.76 Aligned_cols=63 Identities=13% Similarity=0.094 Sum_probs=55.1
Q ss_pred cccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHHHHHHHH
Q 015847 318 LNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG 381 (399)
Q Consensus 318 ~g~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (399)
+|++..+ .|.+.+....+..+..+ .++++.||+|.|+++.++.+.-.+...+.++.++.....
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 99999999999999995 889999999999999999999888888888766544433
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.89 E-value=0.023 Score=55.29 Aligned_cols=159 Identities=13% Similarity=0.071 Sum_probs=110.8
Q ss_pred ChhHHHHHHHHHHHhhccc-cchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccccc-CCchhhH
Q 015847 39 PITELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVII 116 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~l~ 116 (399)
.|+....+.....+.-... +.....+.++.++++.+... +.-..+.+........+..+.++|-| ||-+++.
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~ 108 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTIN 108 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3444443333333333333 34567777888999998877 77777888888888889999999976 8889999
Q ss_pred HHHHHHHHHHHHHhccc----------------------h---HHHHHHHHHHHhhhccchhhH-HHHHhhhcc---chh
Q 015847 117 MGTASVVIFNTLFGLSV----------------------N---FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EEH 167 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~~----------------------~---~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~---~~~ 167 (399)
++.++..++..+..++. + ...++...-+..+|.|..-|+ .++-+|.++ +++
T Consensus 109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~ 188 (571)
T KOG1237|consen 109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE 188 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence 99888888765444311 1 124555556666788887786 889999998 322
Q ss_pred -h--hHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccc
Q 015847 168 -Q--ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (399)
Q Consensus 168 -r--~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f 210 (399)
+ ..-+..+....++|..++-.+-.+..+ ..||...|
T Consensus 189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~-------~~~w~lgf 227 (571)
T KOG1237|consen 189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQD-------NVGWKLGF 227 (571)
T ss_pred hhCcccchhHHHHHHHHHHHHHHHHHHhhhh-------cccceeec
Confidence 2 356677788889999999888888876 56675555
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.82 E-value=0.0078 Score=56.17 Aligned_cols=130 Identities=8% Similarity=-0.103 Sum_probs=92.4
Q ss_pred hhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh---cc---c
Q 015847 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LS---V 133 (399)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~---~ 133 (399)
....+..+...-|+++.. +|..-+...+....+.....++.+|+|..|.=.++.........++. +. +
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 355555566666999999 99999999999999999999999999988887777664443332222 11 1
Q ss_pred ----hHHHHHHHHHHHhhh-ccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 134 ----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 134 ----~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+...++.+-.+.=+| .+.-....-++.|..|+++||...|.-....++-..+...++-.+.+
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 222333333333444 22333347888999999999999999999999988888777655544
No 265
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.69 E-value=0.00083 Score=62.73 Aligned_cols=85 Identities=22% Similarity=0.396 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH-HH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG-TA 120 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~-~~ 120 (399)
.++.+=+..+..+...+.+.|.++.+.+++|+++.+ .|.+...-.+..+++.|++|.++||+-+||.++++ .+
T Consensus 12 ~l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~------~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~ 85 (618)
T KOG3762|consen 12 ALIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAV------VGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLL 85 (618)
T ss_pred hhheeeeeeeeeeecccccchHHHHHHHHcCCCHHH------hhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHH
Confidence 344444445556677788899999999999999999 99999999999999999999999999877666655 45
Q ss_pred HHHHHHHHHhcc
Q 015847 121 SVVIFNTLFGLS 132 (399)
Q Consensus 121 ~~~~~~~~~~~~ 132 (399)
....+.++..+.
T Consensus 86 ~~v~a~fll~fv 97 (618)
T KOG3762|consen 86 LSVTATFLLVFV 97 (618)
T ss_pred HHHHHHHheeec
Confidence 555566665553
No 266
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.63 E-value=0.026 Score=39.22 Aligned_cols=74 Identities=20% Similarity=0.165 Sum_probs=59.3
Q ss_pred hhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHHH
Q 015847 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (399)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (399)
.-+.+...+|...++ .++|..+.|++-+.+.++..++.+ ...++.++.++++.+..+.+...+.....++.++
T Consensus 7 gRFayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566677766555 799999999999999999999995 7788888777888888898888888888776654
Q ss_pred H
Q 015847 377 L 377 (399)
Q Consensus 377 ~ 377 (399)
.
T Consensus 80 ~ 80 (85)
T PF06779_consen 80 F 80 (85)
T ss_pred h
Confidence 3
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.59 E-value=0.0039 Score=58.47 Aligned_cols=155 Identities=10% Similarity=0.149 Sum_probs=88.4
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhH-HHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccc-cccCCchhhH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVA-DRYGRKPVII 116 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~-dr~Grr~~l~ 116 (399)
.+...+.+....+...+......... +.....++.+.++ +..+-|...++..+-.....+..+... -++.+|+.+.
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~--av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~ 337 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSE--AVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIIL 337 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccch--HHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeee
Confidence 34444444444444444333322322 3444556766655 222244444444444444444444433 3445566666
Q ss_pred HHHHHHHHHHHHHhcc-------------------------------chHHHHHHHH-HHHhhhccchhh-HHHHHhhhc
Q 015847 117 MGTASVVIFNTLFGLS-------------------------------VNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIF 163 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~-------------------------------~~~~~l~~~r-~l~G~~~~~~~~-~~~~~~~~~ 163 (399)
.+.++........-+. .+.+.+++.+ ++.|.+.-.... ..++-+|..
T Consensus 338 ~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiL 417 (488)
T KOG2325|consen 338 LGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKIL 417 (488)
T ss_pred ehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHh
Confidence 6644444433332210 1223334443 455665555444 488999999
Q ss_pred cchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.|++++...+.+......+..+||++......
T Consensus 418 gp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~ 449 (488)
T KOG2325|consen 418 GPRDQGTMQGVFSISGSIARVVGPIFSTAIFT 449 (488)
T ss_pred CCccccceeEEEEeccchhhhhhHHHHhhhHH
Confidence 99999999999999999999999999988877
No 268
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.53 E-value=0.5 Score=41.91 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=47.5
Q ss_pred hhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhH-HHHHhhhc
Q 015847 97 LTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (399)
Q Consensus 97 ~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~ 163 (399)
..+.+.+.+.+++|-|+++.++...+...... -+-+.+..++-.-...|++.+..... .+++++.-
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 44445558889999999999988877654432 23467788888889999988876664 55655544
No 269
>PRK03612 spermidine synthase; Provisional
Probab=96.28 E-value=0.15 Score=49.37 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=69.5
Q ss_pred HHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH---HH-HHHh---ccchH-HHH
Q 015847 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI---FN-TLFG---LSVNF-WMA 138 (399)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~---~~-~~~~---~~~~~-~~l 138 (399)
+..-+|-+..+ .+.+.+++..|..+|+...+++.++--|+. ..+-..+..+ +. ++.. +.... ..+
T Consensus 41 l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~ 113 (521)
T PRK03612 41 ASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLL 113 (521)
T ss_pred HHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777777 899999999999999999888764322222 1111111111 11 1111 11111 112
Q ss_pred HHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 139 ~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
+...++.++..|+..|. ..+..+ ...++-++..|.......+|.++|.++.+++.-
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 23334556666666664 333333 222234567788888889999999998887763
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.98 E-value=0.1 Score=48.93 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH---HHhccCccccchhhhhhHHHHHHHHHHHhhhhccccccc---ccCCchhhH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFMI---KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVII 116 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~d---r~Grr~~l~ 116 (399)
++.+....+..+..........|.-. +..+.+... +.+.......++..++..+.+.+++ ++||++.+.
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-----~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-----LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-----HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 33444445555554444444444222 222222221 1444444455555666666666665 578999999
Q ss_pred HHHHHHHHHHHHHhcc------------------chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHH
Q 015847 117 MGTASVVIFNTLFGLS------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST 177 (399)
Q Consensus 117 ~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~ 177 (399)
++.++..+.+++.-.. ++.....+.-++.|++-+..... +.++.+.. +++|..+.++...
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kf 395 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKF 395 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHH
Confidence 9998888887776542 24556677778999998887775 88888888 6788888888877
Q ss_pred HHHHHHhHHHHhhh
Q 015847 178 AWGIGLIIGPALGG 191 (399)
Q Consensus 178 ~~~~g~~~~p~i~~ 191 (399)
-..++..++-....
T Consensus 396 yq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 396 YQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHhhhhh
Confidence 77777765544443
No 271
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.95 E-value=0.24 Score=44.65 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=45.3
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 318 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
+|++..+++.++........+.+. +.|.+.||+|||+..+..+++..++.+.
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 799999999999888888888874 7899999999999998888888887764
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.95 E-value=0.1 Score=49.15 Aligned_cols=109 Identities=13% Similarity=0.027 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCc-hhhHHHHHH---HHHHHHHHhc---------cchHHHHHHHHHHHhhhcc
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTAS---VVIFNTLFGL---------SVNFWMAVLTRFLLGSLNG 150 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr-~~l~~~~~~---~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~ 150 (399)
.-.....+.++-.+|..+..+.. .-++| +.+.+..++ +....++|.. -++-+..++..++.|+.+|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 56777888888888887654431 11222 133333333 3333333332 2456667777899999999
Q ss_pred chhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 151 ~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
..... ..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98774 88888889999999998888999999998888776443
No 273
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.60 E-value=0.0032 Score=60.87 Aligned_cols=148 Identities=14% Similarity=0.241 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccC--CchhhHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIMG 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~G--rr~~l~~~ 118 (399)
+....++..........+..+.| +++.+|+.++++ .+++..+..+ +.++|.+++|++..|+. .|+.+...
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~ 380 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ------ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFC 380 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHH
Confidence 33455666666777777888888 666789999988 7777766555 66788899999999875 45555444
Q ss_pred HHHHHHHHHHHh---c--c-------------------------------------------------chHHHHHHHHHH
Q 015847 119 TASVVIFNTLFG---L--S-------------------------------------------------VNFWMAVLTRFL 144 (399)
Q Consensus 119 ~~~~~~~~~~~~---~--~-------------------------------------------------~~~~~l~~~r~l 144 (399)
.+...++.++.. + + +.+..+++..++
T Consensus 381 ~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~ 460 (539)
T PF03137_consen 381 IVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFI 460 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHH
Confidence 444444333211 0 0 011222233333
Q ss_pred Hhhhccc-hhhHHHHHhhhccchhhhHHHHHHHH-HHHHHHhHHHHhhhhhcCC
Q 015847 145 LGSLNGL-LGPIKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 145 ~G~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~i~~~l~~~ 196 (399)
.-+..+. ..|....+-+.+++++|..++|+... .-.+|.+=||++-|.+.|.
T Consensus 461 ~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 461 LSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 3232333 34456666788999999999999855 4557788899999999983
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.48 E-value=2.1 Score=39.55 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHH
Q 015847 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (399)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (399)
..+..++..+......+......+++.+++--+..+ ............+...+....--.+.-|. |+++.......
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~ 94 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLI 94 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 334444455555567778888888887776443332 11233444444445555555555566662 22222211222
Q ss_pred HHHHHHHHhcc---------chHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhh
Q 015847 122 VVIFNTLFGLS---------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ 168 (399)
Q Consensus 122 ~~~~~~~~~~~---------~~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r 168 (399)
..+..+.+.++ ..+...++.-.+.+.+.|..... +...+ .+|+|.-
T Consensus 95 ~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~yt 150 (406)
T KOG1479|consen 95 AILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYT 150 (406)
T ss_pred HHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHH
Confidence 22122222221 23445555566667776666554 44444 4455543
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.46 E-value=0.043 Score=46.80 Aligned_cols=106 Identities=12% Similarity=0.025 Sum_probs=50.7
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHhhhhhcCCCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHhcccCCC-CCC
Q 015847 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH-RHN 244 (399)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ 244 (399)
|+|+........+.++|.++.-..--.-.+. +. ..+-.|+..+.+.+++.++.++.+..+-+.-+ ..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~----------~~-~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~ 70 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSV----------VI-ALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSP 70 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchH----------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCc
Confidence 4555555555667777776654332111010 00 11334666667777666665555544422211 111
Q ss_pred CCCCccchhhhhhhhhhhhhhhccccCCcccccccccchhHHHHHHHHHHHh
Q 015847 245 DDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (399)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
++++++.+ .....+....+.+|++..|...+.+.....
T Consensus 71 ~~k~~k~~--------------~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv 108 (267)
T PF07672_consen 71 KEKQEKEN--------------STLSKKPSYKSILKEKETWKWILIYGIWLV 108 (267)
T ss_pred cccccccc--------------ccccccchHHHHHccchHHHHHHHHHHHhe
Confidence 10110000 011123466788899888877766665443
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.42 E-value=1.7 Score=41.08 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHh
Q 015847 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i 189 (399)
.++..++.-++.|++.+..... .++.+ .+|++. ++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHH
Confidence 4556666667788887777765 55555 666543 444555556666555544
No 277
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.72 E-value=0.074 Score=52.89 Aligned_cols=79 Identities=11% Similarity=0.190 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccCC--chhhHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGR--KPVIIMG 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~Gr--r~~l~~~ 118 (399)
++...+..++..........++|.+ .+++|.+..+ .+++.+...+ +.+++.++.|+++||+++ |+.+.++
T Consensus 332 f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~------ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~ 405 (633)
T TIGR00805 332 YMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAE------ANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFA 405 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHH
Confidence 3344455555566666677788855 4579999998 9998887776 568899999999999984 5666666
Q ss_pred HHHHHHHHH
Q 015847 119 TASVVIFNT 127 (399)
Q Consensus 119 ~~~~~~~~~ 127 (399)
.++..++.+
T Consensus 406 ~~~~~~~~~ 414 (633)
T TIGR00805 406 ICLSTLSYL 414 (633)
T ss_pred HHHHHHHHH
Confidence 655555543
No 278
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.26 E-value=0.025 Score=48.01 Aligned_cols=63 Identities=8% Similarity=0.034 Sum_probs=43.1
Q ss_pred cccccccccchhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHH
Q 015847 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQ 340 (399)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 340 (399)
..+...+++-.+....+.+.+.-........+++.|..++ ++++.+...++-.+..+.....+
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfvidd-----lqm~qsakAllP~v~Yl~SF~VS 254 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDD-----LQMEQSAKALLPMVAYLSSFSVS 254 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeeh-----hhHHHHHhhhhHHHHHHhhhhHH
Confidence 4566777887888888888777766666677777776665 66666666666666555555544
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.22 E-value=0.64 Score=40.90 Aligned_cols=173 Identities=13% Similarity=0.051 Sum_probs=96.4
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccc---------cchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhh
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE---------EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (399)
..++..+++++++........++..+-.-++.. +-.+...|.+.-+-.+-..+..+.+..+.||+.--.=.
T Consensus 16 ~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri 95 (409)
T KOG3880|consen 16 AFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGFRI 95 (409)
T ss_pred HHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccchHH
Confidence 344555666666555544445554332211100 00111145555556666667777777888887643334
Q ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.+..++.+.+.++.+++++.++-+.+-.+..++.|..-...--++..+++. ..+-+..+.+.++.+|..--.++.+
T Consensus 96 ~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 96 ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSI----VIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCc----eeccccCCCCcchhhhhhHHHHHhh
Confidence 556677788888999999999888888888888777555433333344432 2333444445555555554444443
Q ss_pred CCCCCCCcccccccccCCcchhhHHHHHHHHHHHHHHHHh
Q 015847 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (399)
Q Consensus 196 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
. + +...+...++...+.++....+++
T Consensus 172 ~-------------~-~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 172 W-------------A-NLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred h-------------c-CCChhhHHHHHHHHHHHHHHHHHh
Confidence 1 1 344555556665555554444444
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.89 E-value=0.019 Score=51.54 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHhhhhccccccccc-CCchhhHHHHHHHHH---HHHHHh----------ccchHHHHHHHHHHHhhhccc
Q 015847 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVI---FNTLFG----------LSVNFWMAVLTRFLLGSLNGL 151 (399)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~---~~~~~~----------~~~~~~~l~~~r~l~G~~~~~ 151 (399)
.....+.++-.+|..+.++.--+. .+|++. +..++-.+ ..+++. +.+|-+..++..++.|+.+|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678888888888776532111 244443 33322222 222221 123456677778899999999
Q ss_pred hhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhh
Q 015847 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (399)
Q Consensus 152 ~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~ 192 (399)
.... ..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8774 8888999999999888888888888888888776543
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.22 E-value=1.4 Score=40.84 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=72.3
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH--HHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HH
Q 015847 80 IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG--TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IK 156 (399)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~ 156 (399)
...+-|.+-++..+...++.+..|++..++.+..-+.++ .++.+...++++..+|.|..+++.++.+.......+ +.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345589999999999999999999998787775544444 344455566777889999999999888877555555 46
Q ss_pred HHHhhhccchhhhHHHHHHHH
Q 015847 157 AYACEIFREEHQALGLSTVST 177 (399)
Q Consensus 157 ~~~~~~~~~~~r~~~~~~~~~ 177 (399)
.-++....++.-+..+|+...
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHhccccceeeeeeeHHH
Confidence 667777777777777776544
No 282
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=92.61 E-value=0.17 Score=38.61 Aligned_cols=44 Identities=11% Similarity=0.122 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHHH
Q 015847 331 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 375 (399)
Q Consensus 331 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (399)
...++..++. +..+++.||++||+.+..+.....++.......+
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 49 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS 49 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc
Confidence 3455666676 4788999999999999888877777766655443
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.29 E-value=4.8 Score=37.23 Aligned_cols=106 Identities=18% Similarity=0.092 Sum_probs=72.6
Q ss_pred hhHHHHH-HHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHh---------ccchHHHHHHHHHHHhhhccchh
Q 015847 84 AGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---------LSVNFWMAVLTRFLLGSLNGLLG 153 (399)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~~~~~~~ 153 (399)
.-....+ +.+...+|.+.+.++-++= ||+. .+..++-.+..-++. .-++-+.+++...+.|+..|-..
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 5555566 8888888877777665553 3433 333333333322222 23566778888899999999988
Q ss_pred hH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhh
Q 015847 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (399)
Q Consensus 154 ~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~ 191 (399)
.+ ..+..+..|++++-.+-.+.......|...|..++.
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 86 889999999988877777777777777777776653
No 284
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=90.16 E-value=2.4 Score=36.58 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=48.7
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHhHH
Q 015847 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 374 (399)
Q Consensus 317 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (399)
.+|+|.++...+.....++..++ +..|.+.|+.+++.++.+|.+...++...+...
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999998888888775 478999999999999999999999998877554
No 285
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.44 E-value=3.6 Score=39.07 Aligned_cols=55 Identities=13% Similarity=0.075 Sum_probs=43.2
Q ss_pred HHHHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 141 TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 141 ~r~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..++.-+..-...+ ..++-+.+.+|..-|+.|.+.++..++|+.--..+.-+++|
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 33555555555555 48899999999999999999999999999877777666666
No 286
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=86.01 E-value=3.9 Score=40.93 Aligned_cols=69 Identities=10% Similarity=0.083 Sum_probs=50.0
Q ss_pred hHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHHhHHhHH
Q 015847 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYI 374 (399)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 374 (399)
+....+..|+... +|++...+..++..+....-+..+ +++++.|+ +|+++.+.++.++..++..++...
T Consensus 5 Gm~aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~pi-lGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 5 GMRTILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTPL-IGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred ecHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3444555666554 788888877777766666666664 77777776 799999999999888888776543
No 287
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=85.81 E-value=2.6 Score=38.30 Aligned_cols=150 Identities=9% Similarity=-0.062 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH
Q 015847 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (399)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (399)
+..+.+..++++...+.-+.......++.+++-+.-. +...-...-.....+..++.|...|+..|+|++.....
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~-----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL-----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh-----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 4445677778888877777777777677666543322 13333334445556778889999999999998866554
Q ss_pred HHHHHH------HHHhcc-c-----hHHHHHHHHHHHhhhc--cchhh-HHHHH--hhhc-------cchhhhHHHHHHH
Q 015847 121 SVVIFN------TLFGLS-V-----NFWMAVLTRFLLGSLN--GLLGP-IKAYA--CEIF-------REEHQALGLSTVS 176 (399)
Q Consensus 121 ~~~~~~------~~~~~~-~-----~~~~l~~~r~l~G~~~--~~~~~-~~~~~--~~~~-------~~~~r~~~~~~~~ 176 (399)
+.-++. +...+. + +...+..+-++.-... +-... +.+++ .||. ++....+..+...
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir 181 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIR 181 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhh
Confidence 332222 222222 2 3444444433333221 11222 22222 2333 2223333335555
Q ss_pred HHHHHHHhHHHHhhhhhcC
Q 015847 177 TAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 177 ~~~~~g~~~~p~i~~~l~~ 195 (399)
..-..-..++|.+.|.+.+
T Consensus 182 ~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 182 GIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred hhhhhhhchhhhhhcccce
Confidence 5556677899999999887
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.82 E-value=11 Score=32.55 Aligned_cols=101 Identities=23% Similarity=0.277 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHhhhhcccccccc-cCCchhhH----HHHHHHHHHHHHHhc-c----chHHHHHHHHHHHhhh-ccch
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSL-NGLL 152 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~-~~~~ 152 (399)
......++..+..+|....|.+... +.||+.+. .+.+..++..++.+. . .+...+++.-++.|.+ .|..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4566667777788888888988764 34555433 233444444443211 1 1355677777788875 4444
Q ss_pred hhHHHHHhhhccchhhhHHHHHHHHHHHHHHhH
Q 015847 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (399)
Q Consensus 153 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (399)
.+.. .+..-++..++-+.--.++..+++|.++
T Consensus 223 ~ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 GVIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHh-cChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3322 2332233222222222334555555543
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=83.30 E-value=21 Score=34.24 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=77.2
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHH
Q 015847 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (399)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (399)
.++...++.+...+.+........++...++.+ ...+.|.......+...+.+++.+++.+|+|-+....+.-+...+
T Consensus 268 ~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~--~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 268 DLALLVIAYGISINLVEVTWKSKLKAQYPSPNE--YSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344444444444454444444444554444433 233456666666677777777779999999988777666554444
Q ss_pred H---HHHHhccc------------hH-H-HHHHH---HHHHhhh-ccchhhHHHHHhhhccchhhhHHHHHH-HHHHHHH
Q 015847 125 F---NTLFGLSV------------NF-W-MAVLT---RFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTV-STAWGIG 182 (399)
Q Consensus 125 ~---~~~~~~~~------------~~-~-~l~~~---r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g 182 (399)
. .+.+.+.+ ++ . ..+++ .++.-.+ .+...|+--++.--.+++.|.++=+.. ..+..+|
T Consensus 346 t~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~G 425 (472)
T TIGR00769 346 TGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLG 425 (472)
T ss_pred HHHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhh
Confidence 2 22111111 11 0 01111 1122222 233444433333345678888888877 5566677
Q ss_pred HhHHHHhhhhh
Q 015847 183 LIIGPALGGFL 193 (399)
Q Consensus 183 ~~~~p~i~~~l 193 (399)
-..|..+...+
T Consensus 426 ks~gs~i~~~l 436 (472)
T TIGR00769 426 KSGGALIQQGL 436 (472)
T ss_pred hHHHHHHHHHH
Confidence 77776655543
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.57 E-value=8.6 Score=34.20 Aligned_cols=105 Identities=11% Similarity=0.125 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCC-chh--h---HHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HH
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGR-KPV--I---IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IK 156 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~--l---~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~ 156 (399)
.-|....|.+|..+..- +-|+=+ +.. + ..-..++.+.-....+.++++..++.-+..|+-+|...+ ..
T Consensus 290 YRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf 364 (409)
T KOG3880|consen 290 YRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTF 364 (409)
T ss_pred chhhheeeeeeEEEEec-----cceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHH
Confidence 56777777766443332 222211 111 1 122233344445566788999988888999997666665 46
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 157 AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 157 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
--+.+-.++++|-.+++....+-++|..++.+++-.+
T Consensus 365 ~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 365 HNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 6677777889999999999888888888877776544
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=78.29 E-value=1.6 Score=40.81 Aligned_cols=88 Identities=15% Similarity=0.016 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----hcchhH-H
Q 015847 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMV-A 357 (399)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~-~ 357 (399)
+........+...+....-.++.+.|+++ .|.+....+.++.+.-+.+.+.+ ++.|..+|| +||||. +
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~------lGvphk~~S~iw~~gPi~G~~vQ-P~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS------LGVPHKWSSIIWLCGPLSGLLVQ-PLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH------cCCCcccccccccccccccceec-ccccccccccccccccccchH
Confidence 33344444444455555556667777776 79999999999888888888888 477888876 566665 4
Q ss_pred HHHHHHHHHHHhHHhHHHHH
Q 015847 358 RIAGVLTIPLLTSYPYIAML 377 (399)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~ 377 (399)
..+.....+++.++++....
T Consensus 106 ~~~s~~i~~~l~Lig~aaDi 125 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADI 125 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhh
Confidence 55667777788877776553
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=77.31 E-value=6.9 Score=35.94 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=43.4
Q ss_pred HHHHhhh-ccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 142 RFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 142 r~l~G~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
..+.+.. ..++...++..+++.+|..-|+.|.+.++..++|+---..+..+++|
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 3444443 33344458899999999999999999999999999988888888887
No 293
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=77.01 E-value=2.8 Score=41.88 Aligned_cols=77 Identities=16% Similarity=0.254 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhccccchhhhHH-HHHHHhccCccccchhhhhhHHHHHHHH-HHHhhhhcccccccccC--CchhhHHH
Q 015847 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIMG 118 (399)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~G--rr~~l~~~ 118 (399)
+....++..+..........++| ++.++||.+.+. +..++....+ +.++|..+.|++..|+- .|....+.
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~------An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~ 467 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASL------ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFV 467 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH------HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHH
Confidence 33456667777777788888888 666789999988 7777755544 45577889999999875 34444444
Q ss_pred HHHHHHH
Q 015847 119 TASVVIF 125 (399)
Q Consensus 119 ~~~~~~~ 125 (399)
++...+.
T Consensus 468 ~~~~~l~ 474 (735)
T KOG3626|consen 468 IVCSVLS 474 (735)
T ss_pred HHHHHHH
Confidence 4443333
No 294
>COG1971 Predicted membrane protein [Function unknown]
Probab=75.49 E-value=43 Score=27.36 Aligned_cols=29 Identities=14% Similarity=-0.112 Sum_probs=17.0
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 342 SLYPFLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
.++..+...+|.+.-+..+.++..++.-.
T Consensus 155 ~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 155 IIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 35555556566666666666665555433
No 295
>PRK11469 hypothetical protein; Provisional
Probab=73.89 E-value=49 Score=27.21 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=32.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 319 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
|.+.....................++.++.++++++.-+.-|.++..++.-.
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555556677777777776666666666666544
No 296
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=73.68 E-value=79 Score=29.55 Aligned_cols=82 Identities=10% Similarity=0.098 Sum_probs=37.8
Q ss_pred HHHHHhhh---ccchhhH-HHHHhhhccchhhhHHHH--HHHHHHHHHHhHHHHhhhhhcC---CCCCCCCcccccc---
Q 015847 141 TRFLLGSL---NGLLGPI-KAYACEIFREEHQALGLS--TVSTAWGIGLIIGPALGGFLAQ---PAEKYPNLFSSES--- 208 (399)
Q Consensus 141 ~r~l~G~~---~~~~~~~-~~~~~~~~~~~~r~~~~~--~~~~~~~~g~~~~p~i~~~l~~---~~~~~~~~~gw~~--- 208 (399)
+.+..|+. .|+...+ .++..+.++...-.+.++ .....+.+ -.+.| .+-+|.+-.||+.
T Consensus 164 gs~afgvtl~~tg~~~~avaalf~qL~~~a~~t~g~~f~llG~aflv---------Rmi~Dvss~~L~WfsPlgW~~~~~ 234 (536)
T COG3559 164 GSVAFGVTLAATGMVFTAVAALFAQLSPSARFTRGVAFALLGTAFLV---------RMIGDVSSGTLSWFSPLGWSLQVR 234 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCccccccchhHHHHHHHHHHH---------HHHhcccccccccccCccceEEee
Confidence 34455552 3444444 666677777544333333 32222211 12222 2234555567764
Q ss_pred cccCCcchhhHHHHHHHHHHHHH
Q 015847 209 LFGKFPYFLPCLCISLFAFGVTI 231 (399)
Q Consensus 209 ~f~~~~~~~~~~~~~~~~~~~~~ 231 (399)
.|.+..|+..+...+..+++..+
T Consensus 235 pyv~e~Wl~~llt~~~aa~l~gv 257 (536)
T COG3559 235 PYVGERWLVLLLTLATAAVLTGV 257 (536)
T ss_pred ecccchHHHHHHHHHHHHHHHHH
Confidence 24355566655555544444433
No 297
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=72.07 E-value=57 Score=27.25 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=22.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHH
Q 015847 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGPIMVARIAGVLTIPL 367 (399)
Q Consensus 319 g~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 367 (399)
|.+............+.....+..++.++.++ .+++. +.-|.++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 44454455555554544444444455555544 34443 44444444433
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.13 E-value=52 Score=28.93 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCc--hhhHHHHHHHHHHHHHHh----ccc---hHHHHHHHHHHHhhhccchhh
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFG----LSV---NFWMAVLTRFLLGSLNGLLGP 154 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~----~~~---~~~~l~~~r~l~G~~~~~~~~ 154 (399)
-|.+.+.++++..+|+-+..++..|-..| ..+.+..+...+...+.. .++ +...-+++..+.-.+.|.+.|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 68899999999999999888877765544 344444444333332222 122 222224444555566788888
Q ss_pred H-HHHHhhhccchhhhHHHHHHHHHHHH
Q 015847 155 I-KAYACEIFREEHQALGLSTVSTAWGI 181 (399)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~ 181 (399)
. .-+-+++.|++.|.+.+..+..-.++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 6 77778899999999998887665444
No 299
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=69.72 E-value=30 Score=24.97 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=17.4
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHh
Q 015847 342 SLYPFLERILGPIMVARIAGVLTIPLLT 369 (399)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (399)
+++.|++++++......+.+++.+++..
T Consensus 61 ~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 61 AVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 5778888888865554444444444433
No 300
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=68.04 E-value=59 Score=25.77 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHH
Q 015847 334 FSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 371 (399)
Q Consensus 334 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (399)
....+.. ++.+.+.+++|.|+.+.++.+...+-....
T Consensus 48 ~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~ 84 (156)
T PF05978_consen 48 GSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASF 84 (156)
T ss_pred HHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3344444 366788899999999999888877655544
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.54 E-value=44 Score=30.55 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=78.8
Q ss_pred hhhhhHHHHHHHHHHHhhhhcccccccccCCch--hhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccchhh-HHH
Q 015847 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP--VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (399)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~ 157 (399)
..+-|..-++..+..+++.+..|.+.-++.|.. .+.++.+..+...+.++.+++.|..+++.++.+..-....+ +..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 445778888888888999999999988887763 34444455555556777788999999888888776666555 477
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
-+++....+.-|..+|+.... +-++-.++.-...|
T Consensus 350 ~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 788888877778777765443 33444444444554
No 302
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=64.81 E-value=93 Score=26.89 Aligned_cols=28 Identities=21% Similarity=0.129 Sum_probs=19.9
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHhH
Q 015847 343 LYPFLERILGPIMVARIAGVLTIPLLTS 370 (399)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (399)
.+..++.|+..|++.+.+.+++.+..+.
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~Fgl~ 286 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFIIFGLV 286 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHHHHHH
Confidence 5567788899888887777766655433
No 303
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=63.33 E-value=1e+02 Score=26.78 Aligned_cols=20 Identities=5% Similarity=-0.082 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHhcccC
Q 015847 220 LCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e~ 239 (399)
++..++.++......+++.+
T Consensus 119 ~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHHHHHheeeecCC
Confidence 33444444444444444433
No 304
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=58.10 E-value=1.2e+02 Score=29.55 Aligned_cols=28 Identities=7% Similarity=0.141 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 015847 325 VGEVLAITGFSLLVFQLSLYPFLERILGP 353 (399)
Q Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (399)
.......+.+.+.+++ +.++++-+.++.
T Consensus 299 ~t~~i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 299 LTAAIILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 3344555555565555 366666666553
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.64 E-value=17 Score=26.41 Aligned_cols=27 Identities=26% Similarity=0.314 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhhccccccccc-CCchh
Q 015847 88 GSSFMFGRALTSVFWGLVADRY-GRKPV 114 (399)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~-Grr~~ 114 (399)
.+.-+++..+.....||+.||| |.++.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3444566667777889999997 44443
No 306
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=51.06 E-value=1.6e+02 Score=25.19 Aligned_cols=44 Identities=18% Similarity=-0.011 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 015847 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (399)
Q Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (399)
...+.......+...++. +..+.+.||.|||+.+..+.....++
T Consensus 39 ~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLG 82 (338)
T ss_pred HHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHH
Confidence 467888888888888887 58899999999887777666543333
No 307
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=49.29 E-value=93 Score=29.52 Aligned_cols=81 Identities=14% Similarity=0.203 Sum_probs=48.1
Q ss_pred ChhHHHHHHHHHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHH
Q 015847 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (399)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (399)
+..+...+.+-.++..++.....|.+ +..++|++.++ ...+.+.-.+...++.++--....+.|-|-....+
T Consensus 14 ~~~~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG 85 (451)
T COG2233 14 PLGKLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLG 85 (451)
T ss_pred ChHHHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEe
Confidence 34445555554555454443333332 33678888888 88888888888888887665533346656555555
Q ss_pred HHHHHHHHH
Q 015847 119 TASVVIFNT 127 (399)
Q Consensus 119 ~~~~~~~~~ 127 (399)
.-...++.+
T Consensus 86 ~sFafi~p~ 94 (451)
T COG2233 86 SSFAFVAPM 94 (451)
T ss_pred chHHHHHHH
Confidence 444444443
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.13 E-value=38 Score=24.64 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (399)
.|-+.++|.-.+++.++.+++..|+.-+-+.=.+|..+..++.....+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 889999999999999999999999998777777777777666655444
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=45.45 E-value=1.8e+02 Score=24.21 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=11.1
Q ss_pred HHHHHHHHHhHHHHhhhhhcC
Q 015847 175 VSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 175 ~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.....-++..+|..+++.+.+
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555656554
No 310
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=42.38 E-value=3.1e+02 Score=26.13 Aligned_cols=31 Identities=29% Similarity=0.460 Sum_probs=23.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
+.+++.+...++.+++.+.|...-|...|..
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~ 47 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFG 47 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcc
Confidence 3445667788888888888888888877544
No 311
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=41.47 E-value=1e+02 Score=30.56 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhhhccchhhH-HHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhcCC
Q 015847 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~~ 196 (399)
|.++++--.++.|++.....+. .-+.-+.+|++.|..+.+++....++|..+...+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666678999998888775 88899999999999999999999999999999988777653
No 312
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=40.86 E-value=1e+02 Score=28.34 Aligned_cols=85 Identities=9% Similarity=0.120 Sum_probs=58.1
Q ss_pred HHHHHHhhccccchhhhHHHH-HHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHH
Q 015847 47 WIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (399)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (399)
.++..+..++.+.+-|-++.+ .++++-+. +........+......+|..++..+.+++.|++|....+.+..+...++
T Consensus 37 ~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 37 YIGLALIAVGTGGIKPNISPFGADQYDEDD-DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccccHHHHHHHHhcccc-hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence 333444566666677777654 45555432 2223334668888889999999999999999999888888888887777
Q ss_pred HHHHhcc
Q 015847 126 NTLFGLS 132 (399)
Q Consensus 126 ~~~~~~~ 132 (399)
.+.+...
T Consensus 116 ~~~f~~~ 122 (372)
T PF00854_consen 116 LIVFLSG 122 (372)
T ss_dssp HHHHHCC
T ss_pred HHHHHhC
Confidence 7766554
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=40.81 E-value=42 Score=26.41 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhH
Q 015847 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (399)
Q Consensus 133 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (399)
+++..+++..++.|+ |.....|.+++--+++++.|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~--gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGL--GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHH--HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344455555444444 334445777777888888899999888877776543
No 314
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=39.33 E-value=9.9 Score=34.11 Aligned_cols=20 Identities=5% Similarity=0.119 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 015847 327 EVLAITGFSLLVFQLSLYPFL 347 (399)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l 347 (399)
.++..+.++-.+|+. +..+.
T Consensus 186 ~~fl~Fn~gD~iGR~-l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRF-LASWP 205 (309)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHHhcch-hccee
Confidence 356678888888884 55554
No 315
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=38.75 E-value=2.8e+02 Score=24.57 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhccchhhHHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhhc
Q 015847 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (399)
Q Consensus 138 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~ 194 (399)
.-..|.+.|+-.-.+.|.++++.-.||++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888876667778999999999665443333344455556666677665554
No 316
>PRK02237 hypothetical protein; Provisional
Probab=38.04 E-value=66 Score=23.50 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhc
Q 015847 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (399)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (399)
.|-+.++|.-.+++.++.+++..|+.-+-+.=.+|..+..++..+..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 788999999999999999999999987766667777666666654433
No 317
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=31.53 E-value=3.3e+02 Score=23.16 Aligned_cols=42 Identities=19% Similarity=0.103 Sum_probs=25.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHH
Q 015847 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILG---PIMVARIAGVL 363 (399)
Q Consensus 321 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~ 363 (399)
|+.+-+..+..++++..... +..+..++++. |++....+..+
T Consensus 162 S~~~Gal~mlaFGlGTlP~l-l~~G~~s~~~s~~~r~~~~rl~~gl 206 (232)
T COG2836 162 SAFEGALVMLAFGLGTLPNL-LAMGIFSSKLSKSSRKRLNRLSGGL 206 (232)
T ss_pred CHHHHHHHHHHHhhcccHHH-HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 66666777777787777665 35666666543 44444444433
No 318
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=31.36 E-value=88 Score=20.32 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhhhccchhhHHHHHhhhccchhhh
Q 015847 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (399)
Q Consensus 134 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~r~ 169 (399)
++..+..-....++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 344444444444455566566678888888875443
No 319
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=29.04 E-value=72 Score=27.05 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=31.7
Q ss_pred HHHhhhccchhh-HHHHHhhhccchhhhHHHHHHHHHHHHHHhHHHHhhhhh
Q 015847 143 FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 143 ~l~G~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~i~~~l 193 (399)
.-.|+|+|.... +..-+.+.+| +......++..++.-+....|-.+.-++
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456887766655 4667777776 5555666666666666666665555444
No 320
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=28.78 E-value=5.5e+02 Score=24.94 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=33.8
Q ss_pred HhhhccchhhH-HHHHhhhcc-chhhhHHHHHHHHHHHHHHhHHHHhhhhhcC
Q 015847 145 LGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (399)
Q Consensus 145 ~G~~~~~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~i~~~l~~ 195 (399)
.|+..-..... -..+.+.+| ++++...+|-++...++-..+-..+++.+.+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir 344 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIR 344 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33443333333 556667776 5677888888877777777666688888887
No 321
>COG5547 Small integral membrane protein [Function unknown]
Probab=27.62 E-value=1.5e+02 Score=18.78 Aligned_cols=38 Identities=34% Similarity=0.530 Sum_probs=19.0
Q ss_pred chhhHHHHHHHHHHHHHHhccchHHH--HHHHHHHHhhhccc
Q 015847 112 KPVIIMGTASVVIFNTLFGLSVNFWM--AVLTRFLLGSLNGL 151 (399)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~~~~~~--l~~~r~l~G~~~~~ 151 (399)
|+.++.+.+...++++.+.+ .+|- +++.-.+.|++.|.
T Consensus 8 kypIIgglvglliAili~t~--GfwKtilviil~~lGv~iGl 47 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTF--GFWKTILVIILILLGVYIGL 47 (62)
T ss_pred ccchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666655544 3332 33333444554443
No 322
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=27.57 E-value=1.1e+02 Score=24.97 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhhcccccccccCC
Q 015847 88 GSSFMFGRALTSVFWGLVADRYGR 111 (399)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Gr 111 (399)
+.-|.+++.+...+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 345677788888999999999875
No 323
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.22 E-value=1.2e+02 Score=22.22 Aligned_cols=50 Identities=20% Similarity=0.184 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 322 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
+...|-.+..++-..++.++ +-++..|+..+.+-=.+|..++.++..++.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl-~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASL-LWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHH-HHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 36678899999999999885 888999988877766777777766665543
No 324
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=26.05 E-value=1e+02 Score=27.01 Aligned_cols=64 Identities=9% Similarity=0.007 Sum_probs=41.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhcCCcccCccccchhhHHHHHHHHHHHHHHHHHHH--------HHHHHHHhcchhHH
Q 015847 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL--------YPFLERILGPIMVA 357 (399)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~--------~~~l~~~~~~~~~~ 357 (399)
-+..+..-.......+++-+|+++ .|.++.....++....+...+...+. ..+-.||+||++..
T Consensus 23 GvGHmlNDitAScWFTYlllfltq------iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQ------IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHH------hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 344444444555666677777776 58888888877777777777665322 24456788887653
No 325
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.95 E-value=2.8e+02 Score=21.43 Aligned_cols=28 Identities=25% Similarity=-0.032 Sum_probs=20.5
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHh
Q 015847 157 AYACEIFREEHQALGLSTVSTAWGIGLI 184 (399)
Q Consensus 157 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (399)
.-+.|++|+..|....+..+.......-
T Consensus 58 ~aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 58 WALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999888877655554443
No 326
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=25.83 E-value=1.7e+02 Score=18.13 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHH
Q 015847 341 LSLYPFLERILGPIMVARIAGVLTIP 366 (399)
Q Consensus 341 ~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (399)
..++.+++++++..+...+..++..+
T Consensus 18 ~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 18 FFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 35778888888885554444444333
No 327
>COG4769 Predicted membrane protein [Function unknown]
Probab=24.50 E-value=66 Score=25.54 Aligned_cols=53 Identities=17% Similarity=0.308 Sum_probs=35.7
Q ss_pred HHHHHHHhhhhcccccccccCCchhhHHHHHHHHHHHHHHhccchHHHHHHHHHHHhhh
Q 015847 90 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (399)
Q Consensus 90 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 148 (399)
.+.++..+.+...-++..++|+|..-.+|.-. .-++.+|..++.+.+++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcc
Confidence 34444555566667788899988874444322 335678999999988887754
No 328
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.81 E-value=2e+02 Score=18.25 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=14.8
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHhcccC
Q 015847 212 KFPYFLPCLCISLFAFGVTIAAFWLPET 239 (399)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (399)
.+++.....+..+.+++.......+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445555555556665555554455543
No 329
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=23.50 E-value=5.7e+02 Score=24.11 Aligned_cols=96 Identities=9% Similarity=0.052 Sum_probs=51.7
Q ss_pred HHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccccCCchhhHHHHH-HHHHHHHHHhccchHHHHHHHHHHHhh
Q 015847 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA-SVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (399)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~ 147 (399)
... .++++ ...+.+...+...++.++-+....+. -|-....|.. .............++.....+-++.|+
T Consensus 31 ~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl 102 (415)
T TIGR00801 31 LAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGL 102 (415)
T ss_pred ccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 444 67777 77888888888888888887766654 2223333322 222222222222344444444455555
Q ss_pred hccchhhH-----HHHHhhhccchhhhHHH
Q 015847 148 LNGLLGPI-----KAYACEIFREEHQALGL 172 (399)
Q Consensus 148 ~~~~~~~~-----~~~~~~~~~~~~r~~~~ 172 (399)
........ ...+.+.+|+.-.+...
T Consensus 103 ~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 103 VYTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 43333321 23557778887776543
No 330
>PRK02237 hypothetical protein; Provisional
Probab=23.25 E-value=1.9e+02 Score=21.19 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhHHh
Q 015847 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (399)
Q Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (399)
...|-.+..++-..++.++ +.++..|+..+-+-=.+|..++.++..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl-~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSL-LWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHH-HHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 4588999999999999885 889999988776666677777766665543
No 331
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=22.63 E-value=5.6e+02 Score=22.91 Aligned_cols=6 Identities=0% Similarity=-0.203 Sum_probs=2.6
Q ss_pred cccccc
Q 015847 203 LFSSES 208 (399)
Q Consensus 203 ~~gw~~ 208 (399)
.+||+.
T Consensus 107 ~lg~~~ 112 (307)
T PF03773_consen 107 ALGWKF 112 (307)
T ss_pred HhCcHH
Confidence 344443
No 332
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=21.74 E-value=5.8e+02 Score=22.79 Aligned_cols=70 Identities=9% Similarity=0.058 Sum_probs=37.0
Q ss_pred HHHHhhccccchhhhHHHHHHHhccCccccchhhhhhHHHHHHHHHHHhhhhcccccccc---cCCchhhHHHHHHHHHH
Q 015847 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR---YGRKPVIIMGTASVVIF 125 (399)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~dr---~Grr~~l~~~~~~~~~~ 125 (399)
.+++.-+..+.....+..+.+..+...+. .++..+.... .++.+-.++ ||.||.=+++.+..++.
T Consensus 33 ~f~~iE~i~g~~s~SlaLLADa~Hml~D~------~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~~nav~ 100 (296)
T COG1230 33 AFMLIEIIGGLLTGSLALLADALHMLSDA------LALLLALIAI------KLARRPATKRFTFGYKRLEILAAFLNALL 100 (296)
T ss_pred HHHHHHHHHHHHhccHHHHHhHHHHHHHH------HHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHHHHHHH
Confidence 33333333444445555666777766655 5554444332 233344444 78888777766666555
Q ss_pred HHHHh
Q 015847 126 NTLFG 130 (399)
Q Consensus 126 ~~~~~ 130 (399)
.+..+
T Consensus 101 Li~~s 105 (296)
T COG1230 101 LIVVS 105 (296)
T ss_pred HHHHH
Confidence 44433
No 333
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.51 E-value=1.9e+02 Score=22.67 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=19.4
Q ss_pred HHHHHHHHhhhhcccccccccCCch
Q 015847 89 SSFMFGRALTSVFWGLVADRYGRKP 113 (399)
Q Consensus 89 ~~~~~~~~~~~~~~G~l~dr~Grr~ 113 (399)
.-|.++..+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4456777788888999999988764
No 334
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.34 E-value=67 Score=28.97 Aligned_cols=21 Identities=14% Similarity=0.001 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHhHHHHhhhhh
Q 015847 173 STVSTAWGIGLIIGPALGGFL 193 (399)
Q Consensus 173 ~~~~~~~~~g~~~~p~i~~~l 193 (399)
|+++.+.+.|++++.++.-.+
T Consensus 217 gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 217 GVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred ceeeeecchhHHHHHHHHHHH
Confidence 444444455555554444333
Done!