BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015848
(399 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 212/411 (51%), Gaps = 100/411 (24%)
Query: 1 MEKLQGPINPYFLGDHLSVECFE-QEFINTGALRFEFEEEDEEGPQFTTTPSLEDKMPFL 59
ME+ QG INP F V E Q F A F F+E++EE SL+D +PFL
Sbjct: 1 MERFQGHINPCFFDRKPDVRSLEVQGF--AEAQSFAFKEKEEE--------SLQDTVPFL 50
Query: 60 QMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQET 119
QMLQS S F KEPNF TLL LQ LK+PWEL E ++ E
Sbjct: 51 QMLQSEDPSSFFSIKEPNFLTLLSLQTLKEPWEL------------------ERYLSLED 92
Query: 120 LDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQ 179
HSPV+ ET +EG + + + I P Q
Sbjct: 93 SQFHSPVQSETNRF---------MEGANQAVSSQEI---------------PFSQANMTL 128
Query: 180 SQFSKSPPITREKRKRK-----------------RTKPIKNKEEVESQRMTHIAVERNRR 222
+ SP +RKRK +TKP KN EE+E+QR+ HIAVERNRR
Sbjct: 129 PSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRR 188
Query: 223 RQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAA- 281
RQMN+H+N+LR+L+PP+Y+QRGDQASI+GGAI++VK LEQ++QSLE+QKR + + S
Sbjct: 189 RQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVV 248
Query: 282 --TLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIH 339
L +S TT D+ + +IE VI
Sbjct: 249 ENALNHLSGISSNDLWTTLEDQTCI--------------------------PKIEATVIQ 282
Query: 340 NHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITS-SETTVHYSFNLKV 389
NHV+LK+ C ++ GQLLK I++LE L+LT LHLNIT+ S ++V YSFNLK+
Sbjct: 283 NHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKM 333
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 218 bits (554), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 212/360 (58%), Gaps = 62/360 (17%)
Query: 34 FEFEEEDEEGPQFTTTPSL--EDKMPFLQMLQSVGTPSVF-PFKEPNFQTLLRLQHLKKP 90
F EEE+++ +TPSL + +PFLQMLQ PS F FK+P+F LL LQ L+KP
Sbjct: 48 FALEEEEQQ----LSTPSLLQDTTIPFLQMLQQSEDPSPFLSFKDPSFLALLSLQTLEKP 103
Query: 91 WELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSES 150
WEL E+ + E + HSP+ ET N + +EG++
Sbjct: 104 WEL------------------ENYLPHEVPEFHSPIHSET----NHYYHNPSLEGVNEAI 141
Query: 151 NQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQ 210
+ + + P ++ + R K+ + + +TREKRKR+RTKP KN EE+ESQ
Sbjct: 142 SNQELPFNPLENA----------RSRRKRKNNNLASLMTREKRKRRRTKPTKNIEEIESQ 191
Query: 211 RMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQ 270
RMTHIAVERNRRRQMN HLN+LRS++P +Y+QRGDQASI+GGAIDFVK LEQ LQSLEAQ
Sbjct: 192 RMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQ 251
Query: 271 KRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDG 330
KR S S + L N+ S ++ N EE+ SKL
Sbjct: 252 KR---------------SQQSDDNKEQIPEDNSLRNISS-NKLRASNKEEQ---SSKL-- 290
Query: 331 AEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITS-SETTVHYSFNLKV 389
+IE VI +HVNLKI C R+ GQLL++I+ LE LR T LHLNITS + T+V YSFNLK+
Sbjct: 291 -KIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 190/364 (52%), Gaps = 88/364 (24%)
Query: 29 TGALRFEFEEEDEEGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPN--FQTLLRLQH 86
+G + F E ED+ G TT +E+K+PFLQMLQ + P F EPN Q+LL
Sbjct: 2 SGLMSFG-ELEDQFGQISDTT--MEEKIPFLQMLQCIEHP--FTTTEPNQFLQSLL---- 52
Query: 87 LKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGL 146
QIQ LE +SC+T ET
Sbjct: 53 ------------------QIQTLESKSCLTLET--------------------------- 67
Query: 147 SSESNQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEE 206
+I+ P T P++ R + + + ++++++ P KNK+E
Sbjct: 68 -------NIKRDPGQ------TDDPEKDPRTENGAVT----VKEKRKRKRTRAP-KNKDE 109
Query: 207 VESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQS 266
VE+QRMTHIAVERNRRRQMN+HLN+LRSLMPP+++QRGDQASI+GGAIDF+KELEQLLQS
Sbjct: 110 VENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQS 169
Query: 267 LEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAE- 325
LEA+KR D T T + + + L+ S E A
Sbjct: 170 LEAEKRK-------------DGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARF 216
Query: 326 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 385
D E+E VI NHV+LK+ C R Q+LKAIV++E+L+L LHL I+SS V YSF
Sbjct: 217 GGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSF 276
Query: 386 NLKV 389
NLK+
Sbjct: 277 NLKM 280
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 136/204 (66%)
Query: 192 KRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIG 251
K KRKR + K EEVESQRMTHIAVERNRR+QMN+HL LRSLMP +YVQRGDQASIIG
Sbjct: 177 KSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 236
Query: 252 GAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMS 311
GAI+FV+ELEQLLQ LE+QKR R+ + + +++S+ TT L +++
Sbjct: 237 GAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVT 296
Query: 312 RPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLH 371
E G + AE+K A++EV ++ +KI RRPGQL+K I ALEDL L+ LH
Sbjct: 297 ELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILH 356
Query: 372 LNITSSETTVHYSFNLKVLVSIPF 395
NIT+ E TV YSFN+K+ F
Sbjct: 357 TNITTMEQTVLYSFNVKITSETRF 380
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 125/192 (65%), Gaps = 20/192 (10%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
KNKEE+E+QRMTHIAVERNRR+QMN++L LRSLMPP Y QRGDQASI+GGAI+++KELE
Sbjct: 115 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELE 174
Query: 262 QLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSM----SRPEIGN 317
LQS+E + T + T G D T TT+ + S+ ++ +RP
Sbjct: 175 HHLQSMEPPVK----TATEDTGAGHDQ----TKTTSASSSGPFSDFFAFPQYSNRPTSAA 226
Query: 318 CEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSS 377
E M AEIEV ++ +H +LKI +RP QLLK + +++ LRLT LHLN+T+
Sbjct: 227 AAEGM--------AEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278
Query: 378 ETTVHYSFNLKV 389
+ +V YS ++KV
Sbjct: 279 DDSVLYSISVKV 290
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 119/188 (63%), Gaps = 15/188 (7%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
KNKEE+E+QRMTHIAVERNRR+QMN++L LRSLMP +Y QRGDQASI+GGAI++VKELE
Sbjct: 105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE 164
Query: 262 QLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEK 321
+LQS+E KR R D ++++ TD S P+
Sbjct: 165 HILQSMEP-KRTRTHDPKG------DKTSTSSLVGPFTD--------FFSFPQYSTKSSS 209
Query: 322 MKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTV 381
ES AEIEV V +H N+KI ++P QLLK I +L+ LRLT LHLN+T+ ++
Sbjct: 210 DVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSI 269
Query: 382 HYSFNLKV 389
YS +++V
Sbjct: 270 LYSISVRV 277
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 108/182 (59%), Gaps = 13/182 (7%)
Query: 212 MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQK 271
M+HIAVERNRRRQMN+HL +LRSL P Y++RGDQASIIGG I+F+KEL+QL+Q LE++K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 272 RMR-MGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSR-PEIGNCEEK--MKAESK 327
R + + S +S TT + + NV + S E+G C E+K
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 328 LDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNL 387
+ G+ +V L++ R GQL+K I LE L LHLNI+S E TV Y F +
Sbjct: 121 ISGS---------NVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVV 171
Query: 388 KV 389
K+
Sbjct: 172 KI 173
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
KN+EE E+QRMTHIAVERNRRRQMN HL+ LRSLMP + +GDQASI+GGAIDF+KELE
Sbjct: 78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Query: 262 QLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEK 321
L SLEAQK + T + LS + S
Sbjct: 138 HKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNG 197
Query: 322 MKAESKLDGAEIEVIVIHNHVNLKIHCPRR-----------PGQLLKAIVALEDLRLTFL 370
+ K ++EV +I H N++I RR P QL K + +L+ L L+ L
Sbjct: 198 STSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSIL 257
Query: 371 HLNITSSETTVHYSFNLKV 389
HL++T+ + YS + KV
Sbjct: 258 HLSVTTLDNYAIYSISAKV 276
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 17/185 (9%)
Query: 208 ESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSL 267
E+QRM HIAVERNRR+QMN L+ L+S+MP +Y Q DQASII G I ++K+LEQ LQSL
Sbjct: 98 ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157
Query: 268 EAQ---KRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKA 324
EAQ ++ + ++ T T T T + S+ + R E+
Sbjct: 158 EAQLKATKLNQSPNIFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEV--------- 208
Query: 325 ESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYS 384
A++EV ++ H N+K+ +P L K I L L+ LHLN+T+S+ ++
Sbjct: 209 -----VADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFT 263
Query: 385 FNLKV 389
F++KV
Sbjct: 264 FSVKV 268
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 57/65 (87%)
Query: 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEA 269
Q+M+H+ VERNRR+QMN+HL LRSLMP YV+RGDQASIIGG ++++ EL+Q+LQSLEA
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 270 QKRMR 274
+K+ +
Sbjct: 160 KKQRK 164
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 324 AESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHY 383
A SK A++EV +V LK + PGQ++K I ALEDL L L +NI + + T+
Sbjct: 279 ANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLN 338
Query: 384 SFNLKV 389
SF +K+
Sbjct: 339 SFTIKI 344
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRM 273
++ ER RR+++ND L LRS++P + + D+ASI+G AID++KEL Q + L +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTE--- 322
Query: 274 RMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEI 333
LE ++S+ T T + + V + E+ C K +
Sbjct: 323 ---------LESTPPSSSSLHPLTPTPQTLSYRV----KEEL--CPSSSLPSPKGQQPRV 367
Query: 334 EVIVIHNH-VNLKIHCPRRPGQLLKAIVALEDLRL 367
EV + VN+ + C RRPG LL + AL++L L
Sbjct: 368 EVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGL 402
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRM 273
++ ER RR+++ND L LRS++P + + D+ASI+G AID++KEL Q + L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 274 RMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEI 333
+ +T +L S+ T T T + + E+ C + + K A +
Sbjct: 363 -LESTPPGSLPPTSSSFHPLTPTPQT-------LSCRVKEEL--CPSSLPSP-KGQQARV 411
Query: 334 EVIVIHNH-VNLKIHCPRRPGQLLKAIVALEDLRL 367
EV + VN+ + C RRPG LL + AL++L L
Sbjct: 412 EVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRM 273
++ ER RR+++ND L LRSL+P + + D+ASI+G AI++VKEL+ + L+ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 274 RMGTTSAATL-EGCDSATSTTTTTTTTDKAILSNVYSMSRP-EIGNCEEKMKAE------ 325
T + +G S T T + SNV S+ + ++ N +K +
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 326 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 385
++LDG E V VI C +PG + + AL+ L L + N T + V F
Sbjct: 433 AQLDGREFFVKVI---------CEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVF 483
Query: 386 NLK 388
++
Sbjct: 484 KVE 486
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 185 SPPI--TREKRKRKRTK-PIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYV 241
SP I T K+ +KRTK KN EE HI ER RR++M D + L +L+ P
Sbjct: 42 SPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALL-PQLP 100
Query: 242 QRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAA 281
+ D+++I+ A+ +K LEQ LQ LE QK ++ +SA+
Sbjct: 101 PKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYSSAS 140
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 30/186 (16%)
Query: 191 EKRKRKRT-KPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASI 249
EK+ RKR KP +EE + H+ ER RR ++N +LR+++P V + D+AS+
Sbjct: 397 EKKPRKRGRKPANGREE----PLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKASL 450
Query: 250 IGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYS 309
+G AI ++ EL+ LQ E+ K E ++ +S D+ L+
Sbjct: 451 LGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSS------VKDRKCLN---- 500
Query: 310 MSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTF 369
+ S L E++V +I ++I C +R K + AL++L L
Sbjct: 501 -------------QESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEV 547
Query: 370 LHLNIT 375
H +++
Sbjct: 548 NHASLS 553
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 188 ITREKRKRKRT-KPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQ 246
+ EKR RKR KP +EE + H+ ER RR ++N LRS++P + + D+
Sbjct: 373 VVDEKRPRKRGRKPANGREEP----LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDK 426
Query: 247 ASIIGGAIDFVKELEQLLQSLEAQKRMRMGT 277
AS++G AI ++KEL++ ++ +E + R+GT
Sbjct: 427 ASLLGDAISYIKELQEKVKIMEDE---RVGT 454
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 30/184 (16%)
Query: 195 RKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAI 254
RK TK + +S HI ER RR ++ L +L+P +++ D+AS++G A+
Sbjct: 134 RKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDAL 191
Query: 255 DFVKELEQLLQSLEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAIL-SNVYSMSRP 313
+K L++ + LE QK+ R LE + K IL N S S
Sbjct: 192 KHIKYLQERVGELEEQKKER-------RLE--------SMVLVKKSKLILDDNNQSFS-- 234
Query: 314 EIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLN 373
+CE+ S LD EIEV V +KI C ++ G L K + +E LH+
Sbjct: 235 --SSCEDGF---SDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEK-----LHIL 284
Query: 374 ITSS 377
IT+S
Sbjct: 285 ITNS 288
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 193 RKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGG 252
RKR R +P + E + H+ ER RR ++N LRS++P + + D+AS++G
Sbjct: 418 RKRGR-RPANGRAEA----LNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLGD 470
Query: 253 AIDFVKELEQLLQSLEAQKRMRMGTTS 279
A+ ++ EL L+ +EA+ R R+G +S
Sbjct: 471 AVSYINELHAKLKVMEAE-RERLGYSS 496
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 98/277 (35%), Gaps = 87/277 (31%)
Query: 116 TQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQI 175
T TL + P L + + + S E+ +EH QV+ P Q
Sbjct: 287 TVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKT----------APSSQW 336
Query: 176 RAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSL 235
KQ F P + K KR + + ++H+ ER RR ++N+ TLRS+
Sbjct: 337 VLKQMIFR--VPFLHDNTKDKR---------LPREDLSHVVAERRRREKLNEKFITLRSM 385
Query: 236 MPPAYVQRGDQASIIGGAIDFVKELEQLLQSLE------AQKRMRMGTTSAATLEGCDSA 289
+P +V + D+ SI+G I +V L + + LE KR R C
Sbjct: 386 VP--FVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQHKRTRT----------CKRK 433
Query: 290 TSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCP 349
TS E+EV +I N V L++ C
Sbjct: 434 TS---------------------------------------EEVEVSIIENDVLLEMRCE 454
Query: 350 RRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFN 386
R G LL + L +L + T VH S N
Sbjct: 455 YRDGLLLDILQVLHELGI---------ETTAVHTSVN 482
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 42/201 (20%)
Query: 170 PPQQQIRAKQSQFSKSPPITREKRKR---KRTKPIKNKEEVESQRMTHIAVERNRRRQMN 226
PP + A Q + P+ E + T ++ +++E Q ++ ER RR+++N
Sbjct: 105 PPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLN 164
Query: 227 DHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTTSAATLEGC 286
D L+ LRS++P + + D+ SI+G AID++KEL + L+ ++ +G+ S
Sbjct: 165 DRLSLLRSIVPK--ITKMDRTSILGDAIDYMKELLDKINKLQEDEQ-ELGSNSHL----- 216
Query: 287 DSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKI 346
+T T+++++ N E++ ++ H++ I
Sbjct: 217 --------STLITNESMVRNSLKF---------------------EVDQREVNTHID--I 245
Query: 347 HCPRRPGQLLKAIVALEDLRL 367
CP +PG ++ + LE L L
Sbjct: 246 CCPTKPGLVVSTVSTLETLGL 266
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRM 273
+I ERNRR+++N L LRS++P + + D+ASII AI +++ L+ + LEA+ R
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIR- 112
Query: 274 RMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEI 333
+ +T ++L + + D+ +L V S ++ + + S ++ E+
Sbjct: 113 ELESTPKSSL----------SFSKDFDRDLLVPVTSKKMKQLDSG----SSTSLIEVLEL 158
Query: 334 EVIVIHNH-VNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITS 376
+V + + + + C +R ++K E L L L N+TS
Sbjct: 159 KVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTS 202
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 218 ERNRRRQMNDHLNTLRSLMP-PAYVQRGDQASIIGGAIDFVKELEQLLQSLE-------- 268
ER RR ND L++L+P P + D+ASI+G AID++KEL + ++ +
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKI---DRASIVGEAIDYIKELLRTIEEFKMLVEKKRC 308
Query: 269 ----AQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKA 324
++KR R+G + + T + D++ + + S C +K
Sbjct: 309 GRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSL----RCSW-LKR 363
Query: 325 ESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYS 384
+SK+ E++V +I + V +K+ ++ LL L+ L+L H + + HYS
Sbjct: 364 KSKV--TEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHH--VAGGQIGEHYS 419
Query: 385 F 385
F
Sbjct: 420 F 420
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKR 272
++ ERNRR+++N L LRS++P + + D+AS+I +ID+++EL ++LEA+ R
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEAEIR 111
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQ-RGDQASIIGGAIDFVKEL 260
KN ++ ES++M H +ER RR++++ LR+L+P Y+Q + + I A++++K+L
Sbjct: 66 KNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDL 125
Query: 261 EQLLQSLEAQKRMRMGTTSAAT 282
+ ++ L +KR R+ +AT
Sbjct: 126 QIKIKELN-EKRNRVKKVISAT 146
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 190 REKRKRKRTKPIK--NKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQA 247
R++R++ T + KE+ ++H+ E+ RR ++N LR+++P V R D+A
Sbjct: 224 RKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--VSRMDKA 281
Query: 248 SIIGGAIDFVKELEQLLQSLEAQ-KRMRMGTT 278
S++ A+ +++ L+ + LE + K+M+M T
Sbjct: 282 SLLSDAVSYIESLKSKIDDLETEIKKMKMTET 313
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQK 271
H+ ER RR ++N+ L+SL+P + R ++ASI+ I ++KEL++ +Q LE+ +
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSR 474
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQK 271
H+ ER RR ++N+ L+SL+P + R ++ASI+ I ++KEL++ +Q LE+ +
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSR 472
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 206 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQ 265
+ ++ R + ER RR +M D L LRSL+P + + D+ASI+G A+ +V+EL+ +
Sbjct: 124 KTKTDRSRTLISERRRRGRMKDKLYALRSLVP--NITKMDKASIVGDAVLYVQELQSQAK 181
Query: 266 SLEA 269
L++
Sbjct: 182 KLKS 185
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 198 TKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFV 257
TKP E E H ER RR ++N TLR+++P Q D+AS++G + +
Sbjct: 80 TKPKSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQ--DKASVLGETVRYF 137
Query: 258 KELEQLLQSL 267
EL++++Q +
Sbjct: 138 NELKKMVQDI 147
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRM 273
H+ ER RR+++N+ L L +L+P +++ D+A+++ AI +K+L++ ++ LE ++ +
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 274 RMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEI 333
+ L +++ + ++ S S E+ ++ M I
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPM--------I 242
Query: 334 EVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLH 371
E V + +++HC + G ++K + +LE RL ++
Sbjct: 243 EARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVN 280
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 203 NKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQ 262
N++ S++ ER RR D L++L+P + D+ASI+G AID++KEL +
Sbjct: 206 NRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNP--TKNDRASIVGEAIDYIKELLR 263
Query: 263 LLQS---LEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCE 319
+ L +KR++ EG D + + L N + C
Sbjct: 264 TIDEFKLLVEKKRVKQ-----RNREGDDVVDENFKAQSEVVEQCLIN----KKNNALRCS 314
Query: 320 EKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSET 379
+K +SK +++V +I + V +KI ++ LL ++ L L H + ++
Sbjct: 315 W-LKRKSKF--TDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHH--VAGAQI 369
Query: 380 TVHYSFNLKVLVS 392
H+SF +S
Sbjct: 370 GEHHSFLFNAKIS 382
>sp|Q9DEQ9|MSGN1_CHICK Mesogenin-1 OS=Gallus gallus GN=MSGN1 PE=2 SV=1
Length = 159
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 218 ERNRRRQMNDHLNTLRSLMPPAYVQRGD---QASIIGGAIDFVKELEQLLQSLE 268
E+ R R + D L+TLR+ +PPAY QRG + + I ++ EL +LL S++
Sbjct: 104 EKLRMRTLADALHTLRNYLPPAYSQRGQPLTKIQTLKCTIKYISELTELLNSVK 157
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
K +++E Q ++ ER RR+++ND L+ LRS++P + + D+ SI+G AID++KEL
Sbjct: 167 KKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDAIDYMKELL 224
Query: 262 QLLQSLEAQKR 272
+ L+ +++
Sbjct: 225 DKINKLQDEEQ 235
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 181 QFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAY 240
+FSK I R+ R +++ KP ER RR +N+ L+ L+P
Sbjct: 198 EFSKE--IRRKGRGKRKNKPF--------------TTERERRCHLNERYEALKLLIPSP- 240
Query: 241 VQRGDQASIIGGAIDFVKELEQLLQSLEA-QKRMRMGTTSAATLEGCDSATSTTTTTTTT 299
+GD+ASI+ ID++ EL + + L+ +R R G ++
Sbjct: 241 -SKGDRASILQDGIDYINELRRRVSELKYLVERKRCGGRHKNNEVDDNNNNKNLDDHGNE 299
Query: 300 DKAILSNVYSMSRPE---IGNCEEK-------MKAESKLDGAEIEVIVIHNHVNLKIHCP 349
D +PE I C ++ +SK+ E++V ++ + V +K+
Sbjct: 300 DDDDDDENME-KKPESDVIDQCSSNNSLRCSWLQRKSKV--TEVDVRIVDDEVTIKVVQK 356
Query: 350 RRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 385
++ LL L+ L+L H + + HYSF
Sbjct: 357 KKINCLLLVSKVLDQLQLDLHH--VAGGQIGEHYSF 390
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 205 EEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQ 262
E+ ES +H E+ RR ++N HL LR L+P + + D+A+++ I+ VKEL+Q
Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNS--DKLDKAALLATVIEQVKELKQ 113
>sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100
PE=2 SV=1
Length = 242
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAY-VQRGDQASIIGGAIDFVKELEQLLQS-- 266
+++ H A ER RR+++N ++LRS +PP ++ ++ + A+ ++ EL++ ++
Sbjct: 62 KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121
Query: 267 ---------LEAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGN 317
+ Q+ + ++ + EG S ST ++T ++ ++ + S+
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQT----- 176
Query: 318 CEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPR 350
EK + L G E + +V+ + + H R
Sbjct: 177 --EKCSFGNVLSGVEEDGLVLVGASSSRSHGER 207
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126
PE=2 SV=1
Length = 221
Score = 38.9 bits (89), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 214 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQA--SIIGGAIDFVKELEQLLQSLEAQK 271
H +ER RR++M TLR+ +P Y+ +G +A + GA++F+K+ E ++ L A++
Sbjct: 47 HRDIERQRRQEMATLFATLRTHLPLKYI-KGKRAVSDHVNGAVNFIKDTEARIKELSARR 105
>sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Rattus
norvegicus GN=Sohlh2 PE=2 SV=1
Length = 462
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 200 PIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKE 259
P+ + E + H + E+ RR ++ LR+L+P ++ D AS+I +D+VK+
Sbjct: 191 PLSSPERNKKASFLHSSKEKLRRERIKFCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQ 250
Query: 260 ---------LEQLLQSLEAQKRM 273
+ Q+ +SL++ KR
Sbjct: 251 VRESLSPAIMAQITESLQSNKRF 273
>sp|Q9JK54|MSGN1_MOUSE Mesogenin-1 OS=Mus musculus GN=Msgn1 PE=2 SV=1
Length = 188
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 168 THPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMND 227
+H + S + PP K K K K V+ +R E+ R R + D
Sbjct: 78 SHEAAGLVELDYSMLAFQPPYLHTAGGLKGQKGSKVKMSVQRRRKAS-EREKLRMRTLAD 136
Query: 228 HLNTLRSLMPPAYVQRGD---QASIIGGAIDFVKELEQLLQS 266
L+TLR+ +PP Y QRG + + I ++ EL LL S
Sbjct: 137 ALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLNS 178
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120
PE=2 SV=2
Length = 204
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 200 PIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQA--SIIGGAIDFV 257
P + E + +++ H +ER RR++M +LRS +P Y+ +G +A + GA+ F+
Sbjct: 17 PQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYI-KGKRAMSDHVNGAVSFI 75
Query: 258 KELEQLLQSLEAQK 271
K+ + ++ L A++
Sbjct: 76 KDTQTRIKDLSARR 89
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 202 KNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELE 261
K ++ + R H E+ RR ++N+ LR L+P + +R D AS + ID+V+ L+
Sbjct: 38 KENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKR-DTASFLLEVIDYVQYLQ 96
Query: 262 QLLQSLEA 269
+ +Q E
Sbjct: 97 EKVQKYEG 104
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 201 IKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQ-RGDQASIIGGAIDFVKE 259
+K +E +++R H +ER RR++ LR L+P Y++ + A + A++++K+
Sbjct: 66 MKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKD 125
Query: 260 LEQLLQSLEAQKRMRM 275
L++ ++ + ++KR R+
Sbjct: 126 LQKKIKEV-SEKRDRI 140
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 203 NKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQ 262
N +++ + R H A E+ RR ++ND LR L+P + Q+ D+AS + I++++ L++
Sbjct: 270 NDQKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSD-QKRDKASFLLEVIEYIQFLQE 328
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 193 RKRKRTKPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGG 252
R +R + K KEE E+ + ++ ER RR +++ L LRS +P V +ASI+
Sbjct: 12 RMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVED 69
Query: 253 AIDFVKELEQLLQSL 267
AI ++ EL+ +++L
Sbjct: 70 AITYIGELQNNVKNL 84
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 212 MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQK 271
+ H+ ER RR ++N LR+++P V + D+ S++ A+ ++ EL+ +++E +K
Sbjct: 342 LNHVEAERMRREKLNHRFYALRAVVPN--VSKMDKTSLLEDAVCYINELKSKAENVELEK 399
>sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentrotus purpuratus PE=2
SV=1
Length = 265
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 208 ESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAI----DFVKELEQL 263
E +R TH VER RR ++N+ + L ++P + Q GG + D++ +L
Sbjct: 189 ERRRATHNEVERRRRDKINNWIVKLSKIIPDCNIDHSKQGQSKGGILTKTCDYIHDLRNS 248
Query: 264 LQSLEAQKRMRMGTTS 279
+ R+R G+ S
Sbjct: 249 NTRMAKASRIRKGSPS 264
>sp|Q6PUV5|MYF6_TETNG Myogenic factor 6 OS=Tetraodon nigroviridis GN=myf6 PE=2 SV=2
Length = 239
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 199 KPIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 258
K K K +R ER R +++N+ + L+ QR + I+ AI +++
Sbjct: 86 KVCKRKSAPTDRRKAATLRERRRLKKINEAFDALKRKSVANPNQRLPKVEILRSAISYIE 145
Query: 259 ELEQLLQSLEAQKRMRMGTTSA---------ATLEGCDSATSTTTTTTTTDKAILS 305
L++LLQSL+ Q+R + G + + + C S T T+ AI++
Sbjct: 146 RLQELLQSLDEQERGQSGASDTRNDKEQNRPSGGDYCWKKASETWPTSADHSAIIN 201
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 208 ESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSL 267
+S HI ER RR ++ L +L+P +++ D+AS++G AI +K L++ ++
Sbjct: 121 QSNAQDHILAERKRREKLTQRFVALSALIPG--LKKMDKASVLGDAIKHIKYLQESVKEY 178
Query: 268 EAQKRMRMGTTSAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESK 327
E T+E S ++ D+ +P + + + S
Sbjct: 179 EE-------QKKEKTME---SVVLVKKSSLVLDEN--------HQPSSSSSSDGNRNSSS 220
Query: 328 LDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNI 374
+ EIEV V V +KI C ++ G ++K + +E L L+ + N+
Sbjct: 221 SNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Mus musculus
GN=Sohlh2 PE=1 SV=2
Length = 467
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 200 PIKNKEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKE 259
P+ + ++ + H E+ RR ++ LR+L+P ++ D AS+I +D+VK+
Sbjct: 191 PLSSLDKSKQASFLHSTKEKLRRERIKSCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQ 250
Query: 260 LEQLL 264
+ + L
Sbjct: 251 VRESL 255
>sp|Q68DE3|K2018_HUMAN Basic helix-loop-helix domain-containing protein KIAA2018 OS=Homo
sapiens GN=KIAA2018 PE=1 SV=3
Length = 2245
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 204 KEEVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQ 262
K+ + R TH AVER+R++++N +N + L+P + + + I+ A ++ EL++
Sbjct: 13 KQHRKKNRETHNAVERHRKKKINAGINRIGELIPCSPALKQSKNMILDQAFKYITELKR 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,568,414
Number of Sequences: 539616
Number of extensions: 5472311
Number of successful extensions: 28462
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 27926
Number of HSP's gapped (non-prelim): 512
length of query: 399
length of database: 191,569,459
effective HSP length: 120
effective length of query: 279
effective length of database: 126,815,539
effective search space: 35381535381
effective search space used: 35381535381
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)