Your job contains 1 sequence.
>015855
MEILSYNCPPNCQVVNLRWKLVKKASQSCESKPPSFREHRILCIRRDFRSGFSGYSISSW
CFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKVLIP
GLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLK
DLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVD
LWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGFSPNPI
RSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI
LETTQHPAAAASFASIMFAPQGNLSFREALSRTSNSFPR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015855
(399 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159033 - symbol:PPH "AT5G13800" species:3702 ... 1139 5.2e-119 2
TAIR|locus:2115440 - symbol:AT4G36530 species:3702 "Arabi... 180 4.0e-19 2
TAIR|locus:2832896 - symbol:AT5G19850 species:3702 "Arabi... 141 4.5e-16 2
UNIPROTKB|Q48LN2 - symbol:catD1 "3-oxoadipate enol-lacton... 95 8.5e-06 2
TAIR|locus:2122654 - symbol:AT4G25290 species:3702 "Arabi... 134 1.5e-05 1
TAIR|locus:2135843 - symbol:AT4G12830 species:3702 "Arabi... 99 0.00019 2
TAIR|locus:2159823 - symbol:AT5G38520 species:3702 "Arabi... 116 0.00056 1
>TAIR|locus:2159033 [details] [associations]
symbol:PPH "AT5G13800" species:3702 "Arabidopsis
thaliana" [GO:0016787 "hydrolase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA;IMP] [GO:0080124 "pheophytinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
eggNOG:COG0596 EMBL:AB005230 GO:GO:0015996 EMBL:AY056386
EMBL:AY070736 EMBL:AY149934 EMBL:AK317089 IPI:IPI00542352
RefSeq:NP_196884.1 RefSeq:NP_850815.1 UniGene:At.23976
ProteinModelPortal:Q9FFZ1 SMR:Q9FFZ1 MEROPS:S33.A34 PRIDE:Q9FFZ1
EnsemblPlants:AT5G13800.1 EnsemblPlants:AT5G13800.2 GeneID:831225
KEGG:ath:AT5G13800 TAIR:At5g13800 HOGENOM:HOG000006184
InParanoid:Q9FFZ1 OMA:VGSFHYE PhylomeDB:Q9FFZ1
ProtClustDB:CLSN2687043 BioCyc:ARA:AT5G13800-MONOMER
BioCyc:MetaCyc:AT5G13800-MONOMER Genevestigator:Q9FFZ1
GO:GO:0080124 Uniprot:Q9FFZ1
Length = 484
Score = 1139 (406.0 bits), Expect = 5.2e-119, Sum P(2) = 5.2e-119
Identities = 207/337 (61%), Positives = 248/337 (73%)
Query: 56 SISSWCFSKNLDREKGSNSSNAVQGFRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIP 115
S+ +W R + SS G + + SG+ DGYV+G +D G + E+
Sbjct: 13 SVVTWSSKLATKRLVPNRSSLLFSGVKKSRLVIRSGNSDGYVVGENDDLGRIARRGESTS 72
Query: 116 KVLIPGLPDEYNGESGAPITSCFWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHY 175
KVLIPGLPDE NGE A I+ EWKPK VHYEKAGC+N+++P VLFLPGFGVGSFHY
Sbjct: 73 KVLIPGLPDESNGEIAARISHSHCEWKPKLRVHYEKAGCDNLDAPAVLFLPGFGVGSFHY 132
Query: 176 EKQLKDLGKDYRAWAIDFLGQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASEL 235
EKQL DLG+DYR WAIDFLGQG+SLP EDPT ++E S+E+K WGFGDK +PWA +L
Sbjct: 133 EKQLTDLGRDYRVWAIDFLGQGLSLPTEDPTTMTEETSSSEDKEPFWGFGDKTEPWADQL 192
Query: 236 AYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVKGVTLLNATPFWGF 295
+S+DLW+DQV YF++EVI EPVY+ GNSLGG+VA+YFAA +PHLVKGVTLLNATPFWGF
Sbjct: 193 VFSLDLWRDQVQYFVEEVIGEPVYIAGNSLGGYVALYFAATHPHLVKGVTLLNATPFWGF 252
Query: 296 SPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDT 355
PNP+RSPKLAR+ PW G FPLP V+K+ E +WQKISDPESIAE+LKQVY DH+ NVD
Sbjct: 253 FPNPVRSPKLARLFPWPGAFPLPERVKKITELVWQKISDPESIAEILKQVYTDHSINVDK 312
Query: 356 VFTRILETTQHPXXXXXXXXXXXXPQGNLSFREALSR 392
VF+RI+E TQHP P G LSF EALSR
Sbjct: 313 VFSRIVEVTQHPAAAASFASIMLAPGGELSFSEALSR 349
Score = 53 (23.7 bits), Expect = 5.2e-119, Sum P(2) = 5.2e-119
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 1 MEILSYNCPPNCQVVNLRWKLVKK 24
MEI+S N P C VV KL K
Sbjct: 1 MEIISLNVVPQCSVVTWSSKLATK 24
>TAIR|locus:2115440 [details] [associations]
symbol:AT4G36530 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR000639
PRINTS:PR00412 InterPro:IPR000073 EMBL:CP002687 GO:GO:0009941
GO:GO:0016787 PRINTS:PR00111 EMBL:AL161589 EMBL:Z99708 HSSP:O31243
EMBL:AY087588 EMBL:AK227038 IPI:IPI00542770 PIR:C85431
RefSeq:NP_195371.1 UniGene:At.4614 ProteinModelPortal:O23227
SMR:O23227 STRING:O23227 MEROPS:S33.A01 PRIDE:O23227
EnsemblPlants:AT4G36530.2 GeneID:829805 KEGG:ath:AT4G36530
TAIR:At4g36530 InParanoid:O23227 OMA:FENLRRP PhylomeDB:O23227
ProtClustDB:PLN02578 ArrayExpress:O23227 Genevestigator:O23227
InterPro:IPR026129 PANTHER:PTHR10992:SF20 Uniprot:O23227
Length = 378
Score = 180 (68.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 221 LWGFGDKAQPWASE--LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNP 278
L GFG W+ + + Y +W DQV F+KEV++EP VVGNSLGGF A+ A P
Sbjct: 133 LLGFG-----WSDKALIEYDAMVWTDQVIDFMKEVVKEPAVVVGNSLGGFTALSVAVGLP 187
Query: 279 HLVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLI-EFIWQKISDPES 337
V GV LLN+ + R ++ PL ++++ F++ + P
Sbjct: 188 EQVTGVALLNSAGQFAAESRK-REEADETVITKFIVKPLKEIFQRVVLGFLFWQAKQPSR 246
Query: 338 IAEVLKQVYADHATNVD 354
I VLK VY D +TNVD
Sbjct: 247 IESVLKSVYID-STNVD 262
Score = 115 (45.5 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 138 FWEWKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQG 197
FWEW+ +HY G P++ + GFG FH+ + +L K Y+ +A+D LG G
Sbjct: 83 FWEWRGH-KIHYVVQG----EGSPLVLIHGFGASVFHWRYNIPELAKKYKVYALDLLGFG 137
Query: 198 MS 199
S
Sbjct: 138 WS 139
>TAIR|locus:2832896 [details] [associations]
symbol:AT5G19850 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=ISS] InterPro:IPR000073 EMBL:CP002688
GO:GO:0016787 PRINTS:PR00111 IPI:IPI00529562 RefSeq:NP_568381.1
UniGene:At.31247 UniGene:At.66697 ProteinModelPortal:F4K2M9
SMR:F4K2M9 PRIDE:F4K2M9 EnsemblPlants:AT5G19850.1 GeneID:832105
KEGG:ath:AT5G19850 OMA:YTFETWG Uniprot:F4K2M9
Length = 359
Score = 141 (54.7 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 81 FRNLNSQVLSGSYDGYVIGGEEDAGSFPKEREAIPKVLIPGLPDEYNGESGAPITSCFWE 140
FR NS ++S S ++ A + I V + DE + E + + W+
Sbjct: 21 FRVKNSSIISFSETHFLRQSISTAIVRSPTKRGIVSVSCSSVTDEASSEE-LQVRTLTWK 79
Query: 141 WKPKFNVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMSL 200
WK +++ Y+ C + P ++ + GFG S H+ K LGK +R ++ID +G G S
Sbjct: 80 WKG-YSIRYQ---CAGTSGPALVLVHGFGANSDHWRKNTPILGKTHRVYSIDLIGYGYS- 134
Query: 201 PDEDPTPRSKEGD 213
+ P PR G+
Sbjct: 135 --DKPNPREFGGE 145
Score = 129 (50.5 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 35/148 (23%), Positives = 69/148 (46%)
Query: 222 WGFGDKAQP--WASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPH 279
+G+ DK P + E Y+ + W +Q+ F +V+++ + + NS+GG V + A P
Sbjct: 131 YGYSDKPNPREFGGEPFYTFETWGEQLNDFCLDVVKDEAFFICNSIGGLVGLQAAVSKPE 190
Query: 280 LVKGVTLLNATPFWGFSPNPIRSPKLARILPWSGTFPLPASVRKLIEFIWQKISDPESIA 339
+ +G+ L+N + + P + R P+ +F + + ++ I+ PE++
Sbjct: 191 ICRGLMLINISLRMLHIK---KQPFIGR--PFIKSFQNLLRNTPVGKLFFKSIAKPETVK 245
Query: 340 EVLKQVYADHATNVDTVFTRILETTQHP 367
+L Q Y D + D + IL P
Sbjct: 246 SILCQCYHDSSQVTDELVEAILRPGLEP 273
>UNIPROTKB|Q48LN2 [details] [associations]
symbol:catD1 "3-oxoadipate enol-lactonase" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0019614
"catechol-containing compound catabolic process" evidence=ISS]
[GO:0042952 "beta-ketoadipate pathway" evidence=ISS] [GO:0047570
"3-oxoadipate enol-lactonase activity" evidence=ISS]
InterPro:IPR000073 eggNOG:COG0596 PRINTS:PR00111 EMBL:CP000058
GenomeReviews:CP000058_GR HOGENOM:HOG000028072 GO:GO:0042952
GO:GO:0019614 GO:GO:0047570 RefSeq:YP_273690.1
ProteinModelPortal:Q48LN2 STRING:Q48LN2 GeneID:3558560
KEGG:psp:PSPPH_1434 PATRIC:19972005 KO:K01055 OMA:FDAIVGW
ProtClustDB:CLSK867833 Uniprot:Q48LN2
Length = 262
Score = 95 (38.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 223 GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACNPHLVK 282
G G +P+ YS+ + V I+ + PV+++G S+GG + A PHL+K
Sbjct: 55 GHGRSDKPYGR---YSIQAMSNDVEALIEHLHLGPVHLIGLSMGGMIGFQLAVDQPHLLK 111
Query: 283 GVTLLNATP 291
+ ++N+ P
Sbjct: 112 SLCIVNSAP 120
Score = 76 (31.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 146 NVHYEKAGCENVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMS 199
++HYE+ G PVL L G G +E Q+ L + YR +D G G S
Sbjct: 10 SLHYEEYGL----GEPVLLLHGLGSSCQDWEYQIPALARQYRVIVMDMRGHGRS 59
>TAIR|locus:2122654 [details] [associations]
symbol:AT4G25290 species:3702 "Arabidopsis thaliana"
[GO:0003913 "DNA photolyase activity" evidence=IEA;ISS] [GO:0006281
"DNA repair" evidence=IEA;ISS] InterPro:IPR006050
InterPro:IPR000073 Pfam:PF00875 EMBL:CP002687 GO:GO:0006281
PRINTS:PR00111 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 IPI:IPI00518108 RefSeq:NP_194259.4 UniGene:At.44762
ProteinModelPortal:F4JSJ6 SMR:F4JSJ6 PRIDE:F4JSJ6
EnsemblPlants:AT4G25290.1 GeneID:828632 KEGG:ath:AT4G25290
OMA:VHGFGAF Uniprot:F4JSJ6
Length = 692
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 208 RSKEGDSTEEKNFLW-----GFGDKAQPWASELAYSVDLWQDQVCYFIKEVIREPVYVVG 262
R + KN +W GFG +P + Y+ LW + + F+ EV+ EP + VG
Sbjct: 433 RDNVDNIVNSKNRVWTITVLGFGKSEKP---NIIYTELLWAELLRDFMAEVVGEPAHCVG 489
Query: 263 NSLGGFVAVYFAACNPHLVKGVTLLNATP--FWGFSPNPIRSPKLARILPWSGTFPLPAS 320
NS+GG+ A P LVK V L+N+ G+SP PI + R+ P+ F
Sbjct: 490 NSIGGYFVALMAFLWPALVKSVVLVNSAGNVVPGYSPLPISRER--RV-PFGAQFG---- 542
Query: 321 VRKLIEFIWQKISDPESIAEVLKQVYADHATNVDT-VFTRILETTQHP 367
+L+ F Q ++ ++LK Y D + T +L ++ P
Sbjct: 543 -SRLLLFFLQL-----NVKKLLKDCYPVKPERADDFLVTEMLRASRDP 584
>TAIR|locus:2135843 [details] [associations]
symbol:AT4G12830 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=ISS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000639 PRINTS:PR00412 InterPro:IPR000073 GO:GO:0009507
EMBL:CP002687 GO:GO:0016787 PRINTS:PR00111 EMBL:AY056437
EMBL:AY090325 IPI:IPI00539162 RefSeq:NP_567394.1 UniGene:At.3098
ProteinModelPortal:Q93ZN4 SMR:Q93ZN4 STRING:Q93ZN4 PRIDE:Q93ZN4
EnsemblPlants:AT4G12830.1 GeneID:826895 KEGG:ath:AT4G12830
TAIR:At4g12830 InParanoid:Q93ZN4 OMA:HEFADCG PhylomeDB:Q93ZN4
ProtClustDB:PLN03084 Genevestigator:Q93ZN4 Uniprot:Q93ZN4
Length = 393
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 156 NVNSPPVLFLPGFGVGSFHYEKQLKDLGKDYRAWAIDFLGQGMS 199
+V+SPPV+ + GF ++ Y K + L K+YRA A D+LG G S
Sbjct: 130 SVDSPPVILIHGFPSQAYSYRKTIPVLSKNYRAIAFDWLGFGFS 173
Score = 64 (27.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 220 FLW-GFGDKAQPWASE-LAYSVDLWQDQVCYFIKEVIREPVYVVGNSLGGFVAVYFAACN 277
F W GFG +P A Y++D + + FI EV V +V V +A
Sbjct: 165 FDWLGFGFSDKPQAGYGFNYTMDEFVSSLESFIDEVTTSKVSLVVQGYFSAAVVKYARNR 224
Query: 278 PHLVKGVTLLN 288
P +K + LLN
Sbjct: 225 PDKIKNLILLN 235
>TAIR|locus:2159823 [details] [associations]
symbol:AT5G38520 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016787 "hydrolase
activity" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009657 "plastid
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] EMBL:CP002688
GO:GO:0009941 GO:GO:0016787 GO:GO:0009534 IPI:IPI00846134
RefSeq:NP_001078682.1 UniGene:At.20746 ProteinModelPortal:F4KBJ3
SMR:F4KBJ3 PRIDE:F4KBJ3 EnsemblPlants:AT5G38520.2 GeneID:833840
KEGG:ath:AT5G38520 OMA:TPILLIW Uniprot:F4KBJ3
Length = 374
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 195 GQGMSLPDEDPTPRSKEGDSTEEKNFLWGFGDKAQPWASELAYSVDLWQDQVCYFIKEVI 254
G G S+P + + T L GFG +P +Y+++ W + + F++EV+
Sbjct: 98 GFGASIPHWRRNINALSKNHTVYAIDLLGFGASDKP--PGFSYTMESWAELILNFLEEVV 155
Query: 255 REPVYVVGNSLGGFVAVYFAA-------------CNPHLVKGVTLLNATPFWGFSPNPIR 301
++P ++GNS+G V A+ LVKG+ LLN G + +
Sbjct: 156 QKPTILIGNSVGSLACVIAASGTKFLIYLEKKTESRGDLVKGLVLLNCAG--GMNNKAVF 213
Query: 302 SP-KLARILPWSGTFPLPASVRKLIEFIWQKISDPESIAEVLKQVYADHATNVDTVFTRI 360
++ ++P R + ++ ++ D E++ +L VY + NVD I
Sbjct: 214 DDWRIKLLMPLLLLIDFLLKQRGIASALFNRVKDRENLKNILTNVYGNK-DNVDDTLVEI 272
Query: 361 L 361
+
Sbjct: 273 I 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 399 387 0.00093 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 627 (67 KB)
Total size of DFA: 290 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.04u 0.10s 32.14t Elapsed: 00:00:03
Total cpu time: 32.04u 0.10s 32.14t Elapsed: 00:00:03
Start: Thu May 9 17:08:09 2013 End: Thu May 9 17:08:12 2013