Query 015858
Match_columns 399
No_of_seqs 269 out of 1666
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 01:33:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015858.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015858hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6.4E-88 1.4E-92 684.4 28.8 313 25-389 22-341 (454)
2 PLN03016 sinapoylglucose-malat 100.0 1.8E-75 3.8E-80 597.0 31.2 311 25-391 15-330 (433)
3 PLN02209 serine carboxypeptida 100.0 4.2E-75 9.1E-80 594.4 32.3 318 18-390 10-333 (437)
4 PF00450 Peptidase_S10: Serine 100.0 2.1E-73 4.6E-78 577.5 24.6 297 37-388 1-306 (415)
5 PTZ00472 serine carboxypeptida 100.0 5.1E-66 1.1E-70 532.5 29.4 278 41-388 41-341 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 1.6E-50 3.4E-55 408.0 17.6 238 42-289 71-333 (498)
7 PLN02213 sinapoylglucose-malat 100.0 1.3E-45 2.9E-50 364.6 20.2 213 125-393 1-218 (319)
8 KOG1283 Serine carboxypeptidas 100.0 3.7E-43 8.1E-48 334.3 10.8 231 47-290 3-242 (414)
9 TIGR03611 RutD pyrimidine util 98.4 1.8E-06 3.8E-11 79.9 9.3 116 63-223 2-117 (257)
10 PLN02824 hydrolase, alpha/beta 98.4 2.7E-06 5.9E-11 82.3 10.8 123 50-221 11-137 (294)
11 TIGR01250 pro_imino_pep_2 prol 98.4 2.1E-06 4.5E-11 80.6 9.7 128 48-221 3-131 (288)
12 PRK00870 haloalkane dehalogena 98.3 7.5E-06 1.6E-10 79.7 12.8 141 29-220 7-149 (302)
13 TIGR03056 bchO_mg_che_rel puta 98.3 6.3E-06 1.4E-10 77.9 11.4 123 51-223 10-132 (278)
14 PHA02857 monoglyceride lipase; 98.2 6.4E-06 1.4E-10 78.7 10.4 125 58-223 9-134 (276)
15 TIGR01249 pro_imino_pep_1 prol 98.2 9.2E-06 2E-10 79.5 11.0 126 49-222 6-131 (306)
16 PRK10673 acyl-CoA esterase; Pr 98.1 1.4E-05 2.9E-10 75.0 9.5 104 71-219 11-114 (255)
17 PLN02298 hydrolase, alpha/beta 98.1 1.7E-05 3.7E-10 78.2 10.4 141 45-223 30-171 (330)
18 PRK03592 haloalkane dehalogena 98.0 4E-05 8.8E-10 74.1 11.5 120 51-223 11-130 (295)
19 PLN02385 hydrolase; alpha/beta 98.0 7.8E-05 1.7E-09 74.4 13.0 128 58-222 70-198 (349)
20 TIGR02240 PHA_depoly_arom poly 98.0 4.3E-05 9.3E-10 73.3 10.7 117 59-222 11-127 (276)
21 PRK03204 haloalkane dehalogena 98.0 7.9E-05 1.7E-09 72.3 12.3 123 47-221 14-136 (286)
22 PF12697 Abhydrolase_6: Alpha/ 98.0 2.3E-05 5.1E-10 70.1 7.7 103 79-223 1-103 (228)
23 PRK06489 hypothetical protein; 97.9 0.00014 3.1E-09 73.0 11.9 141 44-220 38-188 (360)
24 PLN02578 hydrolase 97.8 0.00021 4.6E-09 71.6 12.8 112 59-220 75-186 (354)
25 TIGR02427 protocat_pcaD 3-oxoa 97.8 8.5E-05 1.8E-09 67.8 9.0 90 73-196 10-99 (251)
26 PF10340 DUF2424: Protein of u 97.8 8.4E-05 1.8E-09 74.9 8.7 129 61-225 105-239 (374)
27 PLN03084 alpha/beta hydrolase 97.8 0.00021 4.5E-09 72.8 11.4 131 44-221 101-232 (383)
28 PRK11126 2-succinyl-6-hydroxy- 97.8 0.00012 2.6E-09 68.2 8.8 100 76-220 2-101 (242)
29 PLN02652 hydrolase; alpha/beta 97.7 0.00037 8.1E-09 71.3 13.0 128 58-222 119-246 (395)
30 TIGR03695 menH_SHCHC 2-succiny 97.7 0.00017 3.7E-09 65.5 8.9 105 76-221 1-105 (251)
31 PRK10749 lysophospholipase L2; 97.7 0.00029 6.2E-09 69.9 11.1 126 58-222 39-167 (330)
32 PLN02679 hydrolase, alpha/beta 97.7 0.00033 7.1E-09 70.5 11.6 127 49-220 63-190 (360)
33 PLN02894 hydrolase, alpha/beta 97.7 0.00039 8.4E-09 71.2 12.3 108 74-221 103-211 (402)
34 PRK14875 acetoin dehydrogenase 97.5 0.00055 1.2E-08 68.1 10.7 114 59-220 118-231 (371)
35 KOG4409 Predicted hydrolase/ac 97.5 0.0004 8.6E-09 68.9 9.3 135 44-224 62-198 (365)
36 TIGR03343 biphenyl_bphD 2-hydr 97.5 0.0004 8.8E-09 66.1 9.1 107 75-220 29-135 (282)
37 PRK10349 carboxylesterase BioH 97.5 0.00031 6.8E-09 66.3 7.9 95 77-220 14-108 (256)
38 PLN03087 BODYGUARD 1 domain co 97.5 0.0011 2.4E-08 69.5 12.6 135 45-220 174-308 (481)
39 PRK05077 frsA fermentation/res 97.4 0.00084 1.8E-08 69.1 10.4 79 126-222 223-301 (414)
40 PLN02211 methyl indole-3-aceta 97.4 0.00089 1.9E-08 64.7 10.0 106 74-220 16-121 (273)
41 TIGR02821 fghA_ester_D S-formy 97.4 0.0032 6.9E-08 60.9 13.5 42 173-224 135-176 (275)
42 PLN02965 Probable pheophorbida 97.4 0.00068 1.5E-08 64.3 8.3 101 79-220 6-106 (255)
43 TIGR01738 bioH putative pimelo 97.4 0.00058 1.2E-08 62.1 7.4 96 76-220 4-99 (245)
44 COG1506 DAP2 Dipeptidyl aminop 97.3 0.00035 7.7E-09 75.5 6.5 133 58-225 374-511 (620)
45 PRK08775 homoserine O-acetyltr 97.2 0.0014 3E-08 65.3 9.3 76 124-221 98-173 (343)
46 PRK05855 short chain dehydroge 97.2 0.0018 3.9E-08 68.2 10.6 100 59-193 12-111 (582)
47 TIGR03101 hydr2_PEP hydrolase, 97.2 0.0012 2.6E-08 64.1 8.1 128 59-224 9-137 (266)
48 COG2267 PldB Lysophospholipase 97.0 0.0061 1.3E-07 60.0 11.5 139 45-224 7-145 (298)
49 PRK10566 esterase; Provisional 97.0 0.0033 7.2E-08 59.0 9.3 110 63-196 14-127 (249)
50 PLN02980 2-oxoglutarate decarb 97.0 0.0034 7.4E-08 74.9 11.1 108 72-220 1367-1479(1655)
51 COG0596 MhpC Predicted hydrola 97.0 0.0057 1.2E-07 54.8 10.1 104 76-222 21-124 (282)
52 PRK07581 hypothetical protein; 97.0 0.0038 8.3E-08 61.8 9.5 128 59-220 25-158 (339)
53 TIGR01840 esterase_phb esteras 97.0 0.0036 7.9E-08 57.9 8.7 115 73-220 10-129 (212)
54 PLN02511 hydrolase 96.9 0.0052 1.1E-07 62.7 10.1 118 47-195 71-192 (388)
55 PRK10985 putative hydrolase; P 96.8 0.0094 2E-07 59.0 10.7 115 50-195 34-150 (324)
56 KOG1455 Lysophospholipase [Lip 96.8 0.015 3.2E-07 56.9 11.7 129 58-221 36-164 (313)
57 PLN02442 S-formylglutathione h 96.8 0.013 2.8E-07 57.1 11.2 56 156-224 126-181 (283)
58 PF00561 Abhydrolase_1: alpha/ 96.8 0.002 4.2E-08 58.6 5.1 75 126-220 1-78 (230)
59 COG3509 LpqC Poly(3-hydroxybut 96.7 0.016 3.4E-07 56.6 11.2 146 59-242 44-202 (312)
60 KOG1515 Arylacetamide deacetyl 96.6 0.016 3.5E-07 58.0 10.6 144 49-224 63-210 (336)
61 KOG4178 Soluble epoxide hydrol 96.5 0.021 4.5E-07 56.5 10.4 138 45-225 20-157 (322)
62 cd00707 Pancreat_lipase_like P 96.5 0.003 6.4E-08 61.5 4.4 81 125-220 66-146 (275)
63 PRK00175 metX homoserine O-ace 96.3 0.036 7.7E-07 56.2 11.5 137 59-221 32-182 (379)
64 TIGR03100 hydr1_PEP hydrolase, 96.3 0.023 4.9E-07 54.9 9.2 79 126-223 58-136 (274)
65 TIGR03230 lipo_lipase lipoprot 96.2 0.015 3.3E-07 60.2 8.0 80 125-220 73-153 (442)
66 TIGR01607 PST-A Plasmodium sub 96.2 0.014 3E-07 58.1 7.4 95 125-222 74-186 (332)
67 KOG2564 Predicted acetyltransf 96.1 0.013 2.8E-07 56.8 6.4 107 74-218 72-179 (343)
68 TIGR00976 /NonD putative hydro 96.0 0.022 4.7E-07 60.8 8.4 131 58-224 5-135 (550)
69 PF00326 Peptidase_S9: Prolyl 95.3 0.012 2.6E-07 54.2 2.8 92 125-227 14-105 (213)
70 PRK10162 acetyl esterase; Prov 95.3 0.063 1.4E-06 53.1 8.0 63 156-223 135-197 (318)
71 PRK10115 protease 2; Provision 95.1 0.042 9E-07 60.3 6.7 138 57-226 424-564 (686)
72 PF00975 Thioesterase: Thioest 95.1 0.1 2.2E-06 48.2 8.5 101 78-220 2-103 (229)
73 PF06500 DUF1100: Alpha/beta h 95.1 0.011 2.5E-07 60.4 2.1 80 126-223 219-298 (411)
74 PF12695 Abhydrolase_5: Alpha/ 95.0 0.047 1E-06 46.2 5.3 95 78-221 1-95 (145)
75 PLN00021 chlorophyllase 94.9 0.21 4.5E-06 49.6 10.4 116 73-223 49-168 (313)
76 TIGR01392 homoserO_Ac_trn homo 94.8 0.27 5.7E-06 49.1 11.0 128 58-221 14-162 (351)
77 PF10230 DUF2305: Uncharacteri 94.6 0.23 5E-06 48.1 9.6 118 76-223 2-124 (266)
78 KOG2100 Dipeptidyl aminopeptid 94.1 0.15 3.2E-06 56.7 8.0 137 59-225 507-648 (755)
79 PLN02872 triacylglycerol lipas 94.1 0.19 4.2E-06 51.5 8.2 126 43-191 40-175 (395)
80 KOG1838 Alpha/beta hydrolase [ 94.0 0.5 1.1E-05 48.4 10.9 109 73-221 122-236 (409)
81 cd00312 Esterase_lipase Estera 93.9 0.29 6.4E-06 51.0 9.3 38 156-194 157-194 (493)
82 PF10503 Esterase_phd: Esteras 93.7 0.24 5.2E-06 46.8 7.5 43 168-220 89-131 (220)
83 PRK11460 putative hydrolase; P 93.4 0.41 8.8E-06 45.1 8.7 37 158-195 86-122 (232)
84 PF05577 Peptidase_S28: Serine 93.3 0.24 5.3E-06 51.0 7.5 95 126-231 60-158 (434)
85 PRK11071 esterase YqiA; Provis 93.2 0.32 6.8E-06 44.5 7.2 34 160-196 48-81 (190)
86 KOG4391 Predicted alpha/beta h 93.0 0.86 1.9E-05 43.0 9.7 130 52-223 57-186 (300)
87 COG0400 Predicted esterase [Ge 93.0 0.61 1.3E-05 43.6 8.9 79 152-241 76-157 (207)
88 COG0657 Aes Esterase/lipase [L 92.5 0.94 2E-05 44.3 10.0 45 175-225 151-195 (312)
89 KOG1454 Predicted hydrolase/ac 92.4 0.48 1E-05 47.3 7.9 66 126-200 87-152 (326)
90 COG4099 Predicted peptidase [G 92.0 2.5 5.3E-05 41.8 11.8 119 57-199 169-292 (387)
91 PLN02454 triacylglycerol lipas 91.3 0.56 1.2E-05 48.3 7.0 69 152-223 205-273 (414)
92 PRK05371 x-prolyl-dipeptidyl a 91.0 0.51 1.1E-05 52.5 6.9 84 124-223 278-375 (767)
93 PF02129 Peptidase_S15: X-Pro 90.2 0.36 7.8E-06 46.4 4.3 83 126-225 58-140 (272)
94 PF07859 Abhydrolase_3: alpha/ 89.3 0.7 1.5E-05 42.0 5.4 45 173-223 68-112 (211)
95 PF01764 Lipase_3: Lipase (cla 89.2 0.82 1.8E-05 38.8 5.4 62 154-221 45-106 (140)
96 cd00741 Lipase Lipase. Lipase 88.8 0.9 1.9E-05 39.6 5.4 43 155-200 10-52 (153)
97 PF02230 Abhydrolase_2: Phosph 88.7 0.7 1.5E-05 42.7 5.0 74 154-239 85-164 (216)
98 PF05990 DUF900: Alpha/beta hy 87.5 0.94 2E-05 43.0 5.0 67 154-224 74-140 (233)
99 cd00519 Lipase_3 Lipase (class 87.4 1.3 2.9E-05 41.3 6.0 60 155-222 110-169 (229)
100 TIGR03502 lipase_Pla1_cef extr 86.8 2.6 5.7E-05 46.9 8.7 46 151-196 521-575 (792)
101 PLN02733 phosphatidylcholine-s 86.5 1.8 3.8E-05 45.2 6.8 40 153-195 142-181 (440)
102 PRK10252 entF enterobactin syn 86.3 5 0.00011 46.9 11.2 90 76-200 1068-1157(1296)
103 PLN02571 triacylglycerol lipas 85.8 2.5 5.3E-05 43.6 7.3 69 153-222 204-276 (413)
104 PRK10439 enterobactin/ferric e 84.6 4.5 9.8E-05 41.7 8.7 36 176-221 288-323 (411)
105 PRK13604 luxD acyl transferase 84.5 5.4 0.00012 39.6 8.8 122 58-222 18-142 (307)
106 PF05728 UPF0227: Uncharacteri 83.9 1.1 2.4E-05 41.1 3.5 51 161-227 47-97 (187)
107 PF11144 DUF2920: Protein of u 83.3 2.1 4.6E-05 43.8 5.5 61 154-224 161-222 (403)
108 PF11288 DUF3089: Protein of u 83.1 1.7 3.6E-05 40.7 4.3 61 156-221 77-137 (207)
109 KOG2183 Prolylcarboxypeptidase 82.4 3.8 8.2E-05 42.1 6.8 64 126-192 112-183 (492)
110 COG3319 Thioesterase domains o 82.1 8.9 0.00019 37.1 9.1 89 77-201 1-90 (257)
111 PRK04940 hypothetical protein; 81.7 2.1 4.5E-05 39.2 4.3 39 176-227 60-98 (180)
112 KOG1552 Predicted alpha/beta h 81.5 4 8.8E-05 39.3 6.4 79 125-224 88-166 (258)
113 PLN02753 triacylglycerol lipas 80.7 4.8 0.0001 42.7 7.1 72 151-222 285-360 (531)
114 PF08237 PE-PPE: PE-PPE domain 80.5 6.2 0.00013 37.3 7.3 86 127-220 4-89 (225)
115 PF05677 DUF818: Chlamydia CHL 80.5 4.1 8.8E-05 41.0 6.2 60 125-192 171-231 (365)
116 PRK06765 homoserine O-acetyltr 80.2 12 0.00026 38.3 9.8 53 150-219 141-194 (389)
117 PLN02719 triacylglycerol lipas 79.9 4.9 0.00011 42.5 6.8 71 152-222 272-346 (518)
118 PF00151 Lipase: Lipase; Inte 79.8 0.71 1.5E-05 46.3 0.7 70 125-199 104-173 (331)
119 KOG3975 Uncharacterized conser 79.7 4 8.6E-05 39.4 5.6 104 73-200 26-130 (301)
120 PF06057 VirJ: Bacterial virul 79.0 4.2 9.2E-05 37.5 5.4 63 150-221 45-107 (192)
121 COG2272 PnbA Carboxylesterase 77.9 16 0.00034 38.5 9.7 34 160-194 165-198 (491)
122 KOG3101 Esterase D [General fu 77.7 11 0.00025 35.5 7.8 182 46-252 8-206 (283)
123 PF03283 PAE: Pectinacetyleste 77.0 19 0.00041 36.6 10.0 153 59-222 34-198 (361)
124 PLN02324 triacylglycerol lipas 76.2 8.3 0.00018 39.8 7.1 69 153-222 193-266 (415)
125 smart00824 PKS_TE Thioesterase 75.7 13 0.00028 32.7 7.6 64 125-200 25-88 (212)
126 COG0429 Predicted hydrolase of 74.0 52 0.0011 33.1 11.8 120 59-220 60-185 (345)
127 TIGR01836 PHA_synth_III_C poly 73.9 7.3 0.00016 38.7 6.1 78 126-223 95-173 (350)
128 PLN02761 lipase class 3 family 73.3 10 0.00022 40.3 7.0 70 153-222 268-343 (527)
129 KOG4627 Kynurenine formamidase 73.1 2.4 5.3E-05 39.7 2.2 73 136-223 102-174 (270)
130 PF05057 DUF676: Putative seri 72.9 11 0.00025 35.0 6.8 50 151-201 54-103 (217)
131 PF07819 PGAP1: PGAP1-like pro 72.5 17 0.00038 34.1 8.0 36 154-189 61-98 (225)
132 COG0627 Predicted esterase [Ge 71.6 9.2 0.0002 38.1 6.1 131 75-224 52-190 (316)
133 PF06342 DUF1057: Alpha/beta h 70.3 29 0.00062 34.2 8.9 103 73-220 32-136 (297)
134 PF12146 Hydrolase_4: Putative 70.1 26 0.00056 27.3 7.2 78 60-164 2-79 (79)
135 PF11187 DUF2974: Protein of u 69.6 7.2 0.00016 36.8 4.6 39 158-200 70-108 (224)
136 PRK14566 triosephosphate isome 68.1 12 0.00027 36.2 6.0 61 153-224 188-248 (260)
137 COG4757 Predicted alpha/beta h 67.3 12 0.00025 36.0 5.4 66 126-195 58-124 (281)
138 KOG2281 Dipeptidyl aminopeptid 66.6 22 0.00048 38.7 7.8 117 75-230 641-771 (867)
139 PLN00413 triacylglycerol lipas 65.8 11 0.00024 39.5 5.5 39 158-199 269-307 (479)
140 PF05448 AXE1: Acetyl xylan es 64.5 31 0.00068 34.3 8.3 141 58-223 65-211 (320)
141 PLN02802 triacylglycerol lipas 63.4 15 0.00033 38.8 5.9 64 154-222 309-372 (509)
142 PLN02310 triacylglycerol lipas 63.3 16 0.00035 37.6 6.0 64 154-222 186-250 (405)
143 PLN02408 phospholipase A1 62.0 12 0.00026 38.1 4.7 46 154-200 179-224 (365)
144 PF06259 Abhydrolase_8: Alpha/ 59.9 15 0.00033 33.4 4.6 65 124-196 62-129 (177)
145 KOG4569 Predicted lipase [Lipi 59.3 18 0.00038 36.3 5.4 59 158-222 156-214 (336)
146 PRK14567 triosephosphate isome 59.2 20 0.00044 34.6 5.6 61 153-224 178-238 (253)
147 KOG2984 Predicted hydrolase [G 58.0 11 0.00023 35.5 3.2 102 59-196 30-134 (277)
148 PLN02934 triacylglycerol lipas 57.6 24 0.00052 37.4 6.2 40 158-200 306-345 (515)
149 PLN02847 triacylglycerol lipas 56.6 18 0.0004 39.0 5.2 52 159-218 237-288 (633)
150 PLN02429 triosephosphate isome 56.4 22 0.00048 35.4 5.4 61 153-224 238-299 (315)
151 PLN02162 triacylglycerol lipas 55.9 13 0.00028 38.9 3.9 39 158-199 263-301 (475)
152 PF07849 DUF1641: Protein of u 54.3 4.7 0.0001 27.8 0.3 16 359-374 16-31 (42)
153 TIGR01838 PHA_synth_I poly(R)- 54.2 65 0.0014 34.5 8.9 85 126-224 221-305 (532)
154 PLN03037 lipase class 3 family 54.1 27 0.00058 37.2 5.8 45 156-200 297-342 (525)
155 COG2945 Predicted hydrolase of 54.0 13 0.00028 34.5 3.1 64 128-199 63-126 (210)
156 PF08840 BAAT_C: BAAT / Acyl-C 51.8 9.9 0.00021 35.3 2.1 34 165-198 11-44 (213)
157 PF07519 Tannase: Tannase and 51.4 49 0.0011 34.9 7.4 85 155-253 98-191 (474)
158 PF10081 Abhydrolase_9: Alpha/ 50.9 20 0.00043 35.2 4.0 37 153-189 86-122 (289)
159 COG3208 GrsT Predicted thioest 49.6 37 0.0008 32.6 5.5 65 126-200 34-98 (244)
160 TIGR03712 acc_sec_asp2 accesso 48.1 36 0.00079 35.9 5.6 114 60-223 276-392 (511)
161 KOG3079 Uridylate kinase/adeny 45.9 12 0.00025 34.6 1.5 15 75-89 6-20 (195)
162 PF01083 Cutinase: Cutinase; 43.1 55 0.0012 29.6 5.5 81 128-223 42-125 (179)
163 PF05049 IIGP: Interferon-indu 42.9 13 0.00028 38.0 1.5 64 74-138 32-97 (376)
164 KOG1516 Carboxylesterase and r 42.4 1.6E+02 0.0035 31.0 9.8 34 160-194 180-213 (545)
165 cd00311 TIM Triosephosphate is 42.1 67 0.0015 30.7 6.2 59 153-223 175-234 (242)
166 PF03583 LIP: Secretory lipase 40.9 79 0.0017 30.8 6.6 67 153-224 45-116 (290)
167 KOG2182 Hydrolytic enzymes of 40.9 84 0.0018 33.3 7.0 69 126-195 119-191 (514)
168 PLN02561 triosephosphate isome 40.0 54 0.0012 31.7 5.1 60 153-223 179-239 (253)
169 KOG3724 Negative regulator of 39.5 41 0.00089 37.6 4.6 93 78-190 91-196 (973)
170 PF00756 Esterase: Putative es 39.4 24 0.00052 32.8 2.6 56 155-224 98-153 (251)
171 PF12740 Chlorophyllase2: Chlo 39.3 48 0.0011 32.1 4.7 64 151-221 62-131 (259)
172 PF02450 LCAT: Lecithin:choles 38.8 32 0.0007 35.1 3.7 39 155-197 102-140 (389)
173 PRK00042 tpiA triosephosphate 38.5 82 0.0018 30.3 6.2 60 153-224 179-239 (250)
174 PRK07868 acyl-CoA synthetase; 38.0 59 0.0013 37.4 6.0 38 176-222 141-178 (994)
175 KOG2382 Predicted alpha/beta h 37.6 65 0.0014 32.1 5.4 53 127-187 82-134 (315)
176 PF00681 Plectin: Plectin repe 36.7 31 0.00067 23.9 2.2 33 218-250 11-43 (45)
177 PF06821 Ser_hydrolase: Serine 35.9 51 0.0011 29.6 4.1 39 175-222 54-92 (171)
178 COG4782 Uncharacterized protei 35.7 59 0.0013 33.1 4.8 48 176-225 191-238 (377)
179 COG3673 Uncharacterized conser 35.0 36 0.00079 34.1 3.1 68 125-197 65-143 (423)
180 COG3596 Predicted GTPase [Gene 34.2 52 0.0011 32.3 4.0 60 74-141 36-101 (296)
181 PF12728 HTH_17: Helix-turn-he 33.9 9.4 0.0002 26.7 -0.8 31 362-392 1-31 (51)
182 PF05576 Peptidase_S37: PS-10 32.4 4.6E+02 0.0099 27.4 10.5 60 125-190 88-148 (448)
183 PRK13962 bifunctional phosphog 32.2 78 0.0017 34.8 5.4 61 153-224 574-635 (645)
184 KOG3967 Uncharacterized conser 31.3 1.3E+02 0.0027 28.7 5.8 79 114-199 121-213 (297)
185 PRK15492 triosephosphate isome 30.7 1.1E+02 0.0023 29.8 5.5 60 153-224 188-248 (260)
186 PF04414 tRNA_deacylase: D-ami 29.5 1.1E+02 0.0025 28.7 5.3 62 126-200 90-152 (213)
187 PF08538 DUF1749: Protein of u 29.2 88 0.0019 31.1 4.8 70 151-225 82-152 (303)
188 KOG1553 Predicted alpha/beta h 29.0 1.6E+02 0.0036 30.0 6.5 59 148-222 287-345 (517)
189 PF09292 Neil1-DNA_bind: Endon 28.8 33 0.00072 23.1 1.2 11 77-87 25-35 (39)
190 COG3545 Predicted esterase of 28.6 1.2E+02 0.0027 27.7 5.2 36 175-220 58-93 (181)
191 COG3571 Predicted hydrolase of 28.3 67 0.0015 29.3 3.4 28 172-199 85-112 (213)
192 PF03959 FSH1: Serine hydrolas 27.9 77 0.0017 29.2 4.0 64 155-224 85-148 (212)
193 COG4425 Predicted membrane pro 27.7 80 0.0017 33.1 4.2 36 153-188 374-409 (588)
194 COG3150 Predicted esterase [Ge 27.3 63 0.0014 29.5 3.1 58 151-228 41-98 (191)
195 PF07389 DUF1500: Protein of u 26.9 49 0.0011 26.6 2.0 27 157-185 7-33 (100)
196 COG0412 Dienelactone hydrolase 26.7 1.1E+02 0.0024 28.9 4.8 43 153-196 90-132 (236)
197 PF03403 PAF-AH_p_II: Platelet 25.8 43 0.00093 34.2 2.0 37 177-224 229-265 (379)
198 PTZ00333 triosephosphate isome 25.5 1.3E+02 0.0028 29.1 5.1 61 152-223 181-242 (255)
199 PRK14565 triosephosphate isome 25.3 1.2E+02 0.0027 28.9 4.8 54 152-224 172-225 (237)
200 PF05277 DUF726: Protein of un 24.9 2.4E+02 0.0051 28.6 7.0 61 156-221 201-261 (345)
201 COG0218 Predicted GTPase [Gene 24.2 1.1E+02 0.0024 28.5 4.2 69 86-170 35-104 (200)
202 PRK03995 hypothetical protein; 24.2 1.3E+02 0.0028 29.3 4.8 48 150-200 156-203 (267)
203 PF15169 DUF4564: Domain of un 23.7 93 0.002 28.6 3.5 44 125-171 122-165 (187)
204 PF06309 Torsin: Torsin; Inte 22.8 69 0.0015 27.6 2.4 17 73-89 49-65 (127)
205 PRK06762 hypothetical protein; 22.5 51 0.0011 28.7 1.6 13 77-89 2-14 (166)
206 PF15613 WHIM2: WSTF, HB1, Itc 22.4 1.6E+02 0.0034 19.9 3.6 28 60-87 11-38 (38)
207 PF01738 DLH: Dienelactone hyd 22.3 68 0.0015 29.2 2.5 41 154-195 77-117 (218)
208 smart00581 PSP proline-rich do 22.1 49 0.0011 24.2 1.1 19 365-383 10-28 (54)
209 KOG2565 Predicted hydrolases o 22.0 5.7E+02 0.012 26.5 8.9 116 58-199 132-252 (469)
210 PF04046 PSP: PSP; InterPro: 21.8 52 0.0011 23.5 1.2 19 365-383 6-24 (48)
211 KOG3877 NADH:ubiquinone oxidor 21.7 99 0.0021 30.6 3.4 50 123-189 68-117 (393)
212 PLN02517 phosphatidylcholine-s 21.6 95 0.0021 33.8 3.6 21 175-195 212-232 (642)
213 PF15253 STIL_N: SCL-interrupt 20.8 1.1E+02 0.0024 31.6 3.8 36 46-84 199-235 (410)
214 COG0529 CysC Adenylylsulfate k 20.2 89 0.0019 28.9 2.6 22 74-95 20-43 (197)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-88 Score=684.36 Aligned_cols=313 Identities=48% Similarity=0.832 Sum_probs=277.8
Q ss_pred cCCCCCCccccCCCCCCCCCcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceee
Q 015858 25 HSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFE 104 (399)
Q Consensus 25 ~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~ 104 (399)
.+.++.++|+.|||++++++|++|||||+|+++.+++|||||+||+.+|+++||||||||||||||+.|+|.|+|||+++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 46678899999999998899999999999999889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeec
Q 015858 105 APTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGES 184 (399)
Q Consensus 105 ~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GES 184 (399)
.++.+|..|||||||.||||||||||||||||+++..++.++|+.+|+|++.||++||++||||++|||||+|||
T Consensus 102 -----~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 -----YNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred -----CCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 677799999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHhccCC---CC--C
Q 015858 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNF---YN--P 259 (399)
Q Consensus 185 YgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~---~~--~ 259 (399)
|||||||+||++|+++|++...+.|||||++||||++|+..|..++++|+|+||+||+++++.+++.|+... .. .
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 999999999999999997655678999999999999999999999999999999999999999999997633 22 3
Q ss_pred chHHHHHHHHHHH-HHhCCCCcccCCccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCCCCCC
Q 015858 260 LSEACDSKLSEVE-KDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGI 338 (399)
Q Consensus 260 ~~~~C~~~~~~~~-~~~~~in~YdI~~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (399)
.+..|..+++.+. +..+++|.|+|+.++|.. .++ . + + ..+
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~-~~~---------------------~---~--~-----~~~------- 297 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYP-TSY---------------------E---L--K-----KPT------- 297 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhcc-ccc---------------------c---c--c-----ccc-------
Confidence 4778999999988 666899999998774432 010 0 0 0 000
Q ss_pred CCCCccccCCCCCCCCCchhHhhhcCchHHHhhhcCCCCCCCce-ecCCCCC
Q 015858 339 VPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPVSDLNF-ICYLSVP 389 (399)
Q Consensus 339 ~~~~~~~~~~~~~pC~~~~~~~~YLN~pdVr~ALHV~~~~~~~w-~C~~~~~ 389 (399)
....+++|.+++ .+.|||+|+||+||||+...+.+| .||..+.
T Consensus 298 -------~~~~~~~c~~~~-~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~ 341 (454)
T KOG1282|consen 298 -------DCYGYDPCLSDY-AEKYLNRPEVRKALHANKTSIGKWERCNDEVN 341 (454)
T ss_pred -------cccccCCchhhh-HHHhcCCHHHHHHhCCCCCCCCcccccChhhh
Confidence 013568999987 489999999999999998877567 5999874
No 2
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.8e-75 Score=596.99 Aligned_cols=311 Identities=39% Similarity=0.795 Sum_probs=264.5
Q ss_pred cCCCCCCccccCCCCCCCCCcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceee
Q 015858 25 HSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFE 104 (399)
Q Consensus 25 ~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~ 104 (399)
.++++++.|++|||+.+++++++||||++|+++.+.+|||||+||+.+|+++||||||||||||||+.|+|.|+|||+++
T Consensus 15 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~ 94 (433)
T PLN03016 15 HHVDSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLK 94 (433)
T ss_pred hcccccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceee
Confidence 34457799999999988899999999999987678899999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeec
Q 015858 105 APTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGES 184 (399)
Q Consensus 105 ~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GES 184 (399)
.+..+.+.+++..|++||++.||||||||||||||||+.+..+. .+|.++|+++++||+.||++||+|+++|+||+|||
T Consensus 95 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 173 (433)
T PLN03016 95 FEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDS 173 (433)
T ss_pred ccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccC
Confidence 44222334689999999999999999999999999998765443 56677789999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHhccCCCC--CchH
Q 015858 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSE 262 (399)
Q Consensus 185 YgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~--~~~~ 262 (399)
|||||||.+|++|+++|+....+.||||||+||||+++|..|..++.+|+++||+|++++++.+++.|+..... .+..
T Consensus 174 YaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~ 253 (433)
T PLN03016 174 YSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNT 253 (433)
T ss_pred ccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchH
Confidence 99999999999999988755567899999999999999999999999999999999999999999999754322 3567
Q ss_pred HHHHHHHHHHHHhCCCCcccCCccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCCCCCCCCCC
Q 015858 263 ACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSW 342 (399)
Q Consensus 263 ~C~~~~~~~~~~~~~in~YdI~~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (399)
.|.+++..+....+++|+|||+.+||.. . . .
T Consensus 254 ~C~~~~~~~~~~~~~~n~yni~~~~~~~--~----------------------~-------------~------------ 284 (433)
T PLN03016 254 QCLKLTEEYHKCTAKINIHHILTPDCDV--T----------------------N-------------V------------ 284 (433)
T ss_pred HHHHHHHHHHHHhcCCChhhccCCcccc--c----------------------c-------------c------------
Confidence 8999999888888999999999776532 0 0 0
Q ss_pred ccccCCCCCCCCCc--hhHhhhcCchHHHhhhcCCCCCCCce-ecCCCCCcc
Q 015858 343 PQLLNSNSVPCTDD--RVATLWLNDAAVRTAIHAEPVSDLNF-ICYLSVPNF 391 (399)
Q Consensus 343 ~~~~~~~~~pC~~~--~~~~~YLN~pdVr~ALHV~~~~~~~w-~C~~~~~~~ 391 (399)
....|..+ ...+.|||+++||+||||++.....| .||..+...
T Consensus 285 ------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~~~ 330 (433)
T PLN03016 285 ------TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYN 330 (433)
T ss_pred ------CCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccccc
Confidence 00246542 23678999999999999986544456 599876533
No 3
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.2e-75 Score=594.43 Aligned_cols=318 Identities=36% Similarity=0.748 Sum_probs=265.8
Q ss_pred HHHHhhhcCCCCCCccccCCCCCCCCCcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhh
Q 015858 18 LSFSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYE 97 (399)
Q Consensus 18 ~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e 97 (399)
|.++..+.+++++++|+.|||+.++++++++|||++|+++.+++|||||+||+.+|+++||||||||||||||+.|+|.|
T Consensus 10 ~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e 89 (437)
T PLN02209 10 LILLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFE 89 (437)
T ss_pred HHHHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHh
Confidence 33444556778889999999998889999999999999777899999999999999999999999999999999999999
Q ss_pred cCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCC
Q 015858 98 HGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANP 177 (399)
Q Consensus 98 ~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~ 177 (399)
+|||+++.++......++++||+||++.||||||||||||||||+.+.... .+++++|+++++||+.||++||+|+++|
T Consensus 90 ~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~ 168 (437)
T PLN02209 90 NGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNP 168 (437)
T ss_pred cCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCC
Confidence 999999843222222578999999999999999999999999998765444 4566788999999999999999999999
Q ss_pred EEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHhccCCC
Q 015858 178 FFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFY 257 (399)
Q Consensus 178 ~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~ 257 (399)
+||+||||||||||.+|.+|+++|++..++.||||||+||||++||..|..++++|++.||+|++++++.+++.|.....
T Consensus 169 ~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~ 248 (437)
T PLN02209 169 FYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYF 248 (437)
T ss_pred EEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccc
Confidence 99999999999999999999998865556789999999999999999999999999999999999999999999965332
Q ss_pred --CCchHHHHHHHHHHHHHhCCCCcccCC-ccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCC
Q 015858 258 --NPLSEACDSKLSEVEKDIAGLNMYDIL-EPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPV 334 (399)
Q Consensus 258 --~~~~~~C~~~~~~~~~~~~~in~YdI~-~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (399)
.+.+..|.+++..+..+.+.+|+|+++ ..|... .. .
T Consensus 249 ~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~--~~---------------------~------------------ 287 (437)
T PLN02209 249 SVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDS--NT---------------------Q------------------ 287 (437)
T ss_pred cCCCChHHHHHHHHHHHHHhhcCCcccccccccccc--cc---------------------c------------------
Confidence 235678999988887777889998754 556421 00 0
Q ss_pred CCCCCCCCccccCCCCCCCCC--chhHhhhcCchHHHhhhcCCCCCCCce-ecCCCCCc
Q 015858 335 RDGIVPSWPQLLNSNSVPCTD--DRVATLWLNDAAVRTAIHAEPVSDLNF-ICYLSVPN 390 (399)
Q Consensus 335 ~~~~~~~~~~~~~~~~~pC~~--~~~~~~YLN~pdVr~ALHV~~~~~~~w-~C~~~~~~ 390 (399)
....+|.. ....+.|||+|+||+||||+......| .|+..+..
T Consensus 288 -------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~~~ 333 (437)
T PLN02209 288 -------------HISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPY 333 (437)
T ss_pred -------------cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchhhc
Confidence 00135643 223678999999999999986555677 49875433
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.1e-73 Score=577.48 Aligned_cols=297 Identities=39% Similarity=0.749 Sum_probs=240.6
Q ss_pred CCCCCCCCcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCC-CCcc
Q 015858 37 PGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGS-LPKL 115 (399)
Q Consensus 37 pg~~~~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~-~~~l 115 (399)
||++.++++++|||||+|+++.+++||||||||+.+|+++||||||||||||||+.|+|+|+|||+++ .+ ..++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~-----~~~~~~l 75 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRIN-----PDGPYTL 75 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEE-----TTSTSEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEe-----ecccccc
Confidence 89988899999999999997788999999999999999999999999999999999999999999999 33 4789
Q ss_pred cccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 116 HVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 116 ~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
+.||+||+++||||||||||||||||+.+..++.++++++|+++++||+.||.+||+|+++|+||+||||||||||.+|.
T Consensus 76 ~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 76 EDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp EE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred cccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 99999999999999999999999999987766778999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHhccC-CCCCchHHHHHHHHHHHH-
Q 015858 196 EVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGN-FYNPLSEACDSKLSEVEK- 273 (399)
Q Consensus 196 ~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~-~~~~~~~~C~~~~~~~~~- 273 (399)
+|++++..+..+.||||||+||||++||..|..++.+|++.||+|+++.++.+.+.|... ........|..+++.+..
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhh
Confidence 999999766557899999999999999999999999999999999999999999999643 223467889988877665
Q ss_pred -----HhCCCCcccCCccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCCCCCCCCCCccccCC
Q 015858 274 -----DIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNS 348 (399)
Q Consensus 274 -----~~~~in~YdI~~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (399)
..+++|+|||+.+|+.. +. ... . ..
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~--~~-------------------~~~-------------~----------------~~ 265 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNP--SR-------------------SSY-------------D----------------NS 265 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT---SH-------------------CTT-------------C----------------CC
T ss_pred cccccccCCcceeeeecccccc--cc-------------------ccc-------------c----------------cc
Confidence 34799999999999753 10 000 0 01
Q ss_pred CCCCCCCchhHhhhcCchHHHhhhcCCCCCCCce-ecCCCC
Q 015858 349 NSVPCTDDRVATLWLNDAAVRTAIHAEPVSDLNF-ICYLSV 388 (399)
Q Consensus 349 ~~~pC~~~~~~~~YLN~pdVr~ALHV~~~~~~~w-~C~~~~ 388 (399)
....|.+....+.|||+++||+||||+......| .|+..+
T Consensus 266 ~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V 306 (415)
T PF00450_consen 266 PSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAV 306 (415)
T ss_dssp CTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHH
T ss_pred ccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccc
Confidence 1245555444789999999999999986555566 598755
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=5.1e-66 Score=532.47 Aligned_cols=278 Identities=29% Similarity=0.608 Sum_probs=231.8
Q ss_pred CCCCcceEEEEEEecC-CCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccC
Q 015858 41 GNLPSKHYSGYVTVDE-SHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNP 119 (399)
Q Consensus 41 ~~~~~~~~sGyl~v~~-~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~ 119 (399)
.+.++++|+|||+|++ ..+++||||||||+.+|+++||+|||||||||||+.|+|.|+|||+++ .++.++..|+
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~-----~~~~~~~~n~ 115 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMN-----ETTGDIYNNT 115 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEe-----CCCCceeECC
Confidence 4567999999999975 457899999999999999999999999999999999999999999999 5556899999
Q ss_pred CCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 120 YSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 120 ~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
+||++.+||||||||+||||||+... ++..++++.|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 99999999999999999999998653 45677899999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCeeeeeeeeecCCccCcccccccchhhhhc-------cCCCCHHHHHHHHH---Hhcc-----CCC-CCchHH
Q 015858 200 GIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHG-------MGLISDDLYEEVQN---LCQG-----NFY-NPLSEA 263 (399)
Q Consensus 200 ~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~C~~-----~~~-~~~~~~ 263 (399)
+|+.+....||||||+||||++||.+|..++.+|++. +|+|++++++.+.+ .|.. ... ......
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~ 274 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSS 274 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchH
Confidence 9876656789999999999999999999999999985 58999999987764 3421 111 112234
Q ss_pred HHHHHHHHHH-----HhCCCCcccCCccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCCCCCC
Q 015858 264 CDSKLSEVEK-----DIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGI 338 (399)
Q Consensus 264 C~~~~~~~~~-----~~~~in~YdI~~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (399)
|..+...|.+ ..+++|+|||+.+|..
T Consensus 275 c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~------------------------------------------------- 305 (462)
T PTZ00472 275 CSVARALCNEYIAVYSATGLNNYDIRKPCIG------------------------------------------------- 305 (462)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheeccCCC-------------------------------------------------
Confidence 5433322211 1368999999998832
Q ss_pred CCCCccccCCCCCCCCCchhHhhhcCchHHHhhhcCCCCCCCce-ecCCCC
Q 015858 339 VPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPVSDLNF-ICYLSV 388 (399)
Q Consensus 339 ~~~~~~~~~~~~~pC~~~~~~~~YLN~pdVr~ALHV~~~~~~~w-~C~~~~ 388 (399)
++|.+...++.|||+|+||+||||+. ..| .|+..+
T Consensus 306 ------------~~c~~~~~~~~yLN~~~Vq~AL~v~~---~~w~~c~~~V 341 (462)
T PTZ00472 306 ------------PLCYNMDNTIAFMNREDVQSSLGVKP---ATWQSCNMEV 341 (462)
T ss_pred ------------CCccCHHHHHHHhCCHHHHHHhCCCC---CCceeCCHHH
Confidence 24665444788999999999999973 346 598764
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-50 Score=407.96 Aligned_cols=238 Identities=32% Similarity=0.637 Sum_probs=191.8
Q ss_pred CCCcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCC
Q 015858 42 NLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYS 121 (399)
Q Consensus 42 ~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~s 121 (399)
.+++++|+||.... -.+|||+++++++|.++|+||||||||||||+.|+|.|+||++|+.+. .+.--.||+|
T Consensus 71 ~lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~----~P~~~~NP~S 142 (498)
T COG2939 71 ILPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT----SPSYPDNPGS 142 (498)
T ss_pred ccchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC----CCCCCCCccc
Confidence 34566677773332 138999999999999999999999999999999999999999999331 1211269999
Q ss_pred CccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCC--CEEEEeecccccchHHHHHHHHH
Q 015858 122 WTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLAN--PFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 122 W~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvp~la~~i~~ 199 (399)
|++++||||||||+||||||+. .++...+.....+|++.|++.||+.||+|.+. |+||+||||||+|+|.+|.+|++
T Consensus 143 W~~~adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 143 WLDFADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred cccCCceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 9999999999999999999973 23445666778899999999999999999887 99999999999999999999999
Q ss_pred hcccCCCCeeeeeeeeecCC-ccCcccccccchhhhhc----cCCCCHHHHHHHHHHhccCCC---------CCchHHHH
Q 015858 200 GIDAGEKPVLNFKGYLVGNG-VTDEEIDGNALVPFVHG----MGLISDDLYEEVQNLCQGNFY---------NPLSEACD 265 (399)
Q Consensus 200 ~~~~~~~~~inLkGi~igNg-~~d~~~~~~~~~~~~~~----~gli~~~~~~~~~~~C~~~~~---------~~~~~~C~ 265 (399)
++ ...+..+||++++|||| +|+|..+...+.+++.. ++..+.+.++.+.+.|+.... ......|.
T Consensus 222 ~~-~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~ 300 (498)
T COG2939 222 DN-IALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCE 300 (498)
T ss_pred hc-cccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHH
Confidence 86 33345799999999999 99999999888888864 456677888888888865331 12345677
Q ss_pred HHHHHHHHHh------CC---CCcccCCccCCC
Q 015858 266 SKLSEVEKDI------AG---LNMYDILEPCYH 289 (399)
Q Consensus 266 ~~~~~~~~~~------~~---in~YdI~~~c~~ 289 (399)
.+...+.... .+ +|+|||+..|..
T Consensus 301 ~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d 333 (498)
T COG2939 301 NASAYLTGLMREYVGRAGGRLLNVYDIREECRD 333 (498)
T ss_pred HHHHHHHhcchhhhccccccccccccchhhcCC
Confidence 7666554432 34 899999988864
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.3e-45 Score=364.59 Aligned_cols=213 Identities=37% Similarity=0.700 Sum_probs=175.5
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
+||||||||||||||||+.+..++ .+|+++|+|++.||+.||++||+|+++||||+||||||||||++|.+|+++|...
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765443 5666777999999999999999999999999999999999999999999988655
Q ss_pred CCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHhccCCCC--CchHHHHHHHHHHHHHhCCCCccc
Q 015858 205 EKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYD 282 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~--~~~~~C~~~~~~~~~~~~~in~Yd 282 (399)
..+.||||||+||||+++|..|..++.+|++.||+|++++++.+.+.|...... ++...|.+++..+..+.+++|+||
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 566899999999999999999999999999999999999999999999754322 356789999988888888999999
Q ss_pred CCccCCCCCcchHHHhhhccCcccccccCCCCCCchhhhhccCCCCCCCCCCCCCCCCCCccccCCCCCCCCC--chhHh
Q 015858 283 ILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTD--DRVAT 360 (399)
Q Consensus 283 I~~~c~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pC~~--~~~~~ 360 (399)
|+.+||.. . . .+ .+.|.. ....+
T Consensus 160 ~~~~~~~~--~----------------------~-------------~~------------------~~~c~~~~~~~~~ 184 (319)
T PLN02213 160 ILTPDCDV--T----------------------N-------------VT------------------SPDCYYYPYHLIE 184 (319)
T ss_pred cccCcccC--c----------------------c-------------CC------------------CCCcccchhHHHH
Confidence 99775532 0 0 00 024653 22368
Q ss_pred hhcCchHHHhhhcCCCCCCCce-ecCCCCCccce
Q 015858 361 LWLNDAAVRTAIHAEPVSDLNF-ICYLSVPNFGA 393 (399)
Q Consensus 361 ~YLN~pdVr~ALHV~~~~~~~w-~C~~~~~~~~~ 393 (399)
.|||+++||+||||++.....| .||..+....+
T Consensus 185 ~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d 218 (319)
T PLN02213 185 CWANDESVREALHIEKGSKGKWARCNRTIPYNHD 218 (319)
T ss_pred HHhCCHHHHHHhCcCCCCCCCCccCCcccccccc
Confidence 8999999999999986543446 59987654443
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-43 Score=334.27 Aligned_cols=231 Identities=27% Similarity=0.505 Sum_probs=196.6
Q ss_pred eEEEEEEecCCCCeeEEEEEEecCCCC-CCCCeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCcc
Q 015858 47 HYSGYVTVDESHGRNLFYYFVESEGNP-SKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (399)
Q Consensus 47 ~~sGyl~v~~~~~~~lfy~f~~s~~~p-~~~PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (399)
.-.||++++ .++|+|||++.+..+- ..+|+.|||+||||+||.. |+|+|+||...+ +.+|+.+|.+
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TWlk 70 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTWLK 70 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchhhh
Confidence 457999998 5899999999886543 7899999999999999986 999999998877 4479999999
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
.|||||||.|||+||||.+..+.|+++++++|.|+.+.|+.||..||||+..||||+-|||||+.++.+|..+.+..+.+
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999999887665
Q ss_pred CCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHH---HHhccC----CCCCchHHHHHHHHHHHHHhCC
Q 015858 205 EKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQ---NLCQGN----FYNPLSEACDSKLSEVEKDIAG 277 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~---~~C~~~----~~~~~~~~C~~~~~~~~~~~~~ 277 (399)
....|+.|+++|+.||+|..-..++.+|++..+++|+...+... +.|... .+..+.......-..+.....+
T Consensus 151 -~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~ 229 (414)
T KOG1283|consen 151 -EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNG 229 (414)
T ss_pred -ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccC
Confidence 35789999999999999999999999999999999998876554 345321 1222333233334456667789
Q ss_pred CCcccCCccCCCC
Q 015858 278 LNMYDILEPCYHG 290 (399)
Q Consensus 278 in~YdI~~~c~~~ 290 (399)
+|.|||..+...+
T Consensus 230 VdfYNil~~t~~d 242 (414)
T KOG1283|consen 230 VDFYNILTKTLGD 242 (414)
T ss_pred cceeeeeccCCCc
Confidence 9999999876544
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.37 E-value=1.8e-06 Score=79.94 Aligned_cols=116 Identities=20% Similarity=0.191 Sum_probs=76.9
Q ss_pred EEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccc
Q 015858 63 FYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYS 142 (399)
Q Consensus 63 fy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~ 142 (399)
+|..+.. ..++.|+||+++|.+|.+..+..+.+ .+ .+..+++.+|.| |.|.|..
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~D~~-G~G~S~~ 55 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYWAPQLD----------------VL-------TQRFHVVTYDHR-GTGRSPG 55 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHHHHHHH----------------HH-------HhccEEEEEcCC-CCCCCCC
Confidence 4555432 22467999999999887766533211 11 124689999988 9999964
Q ss_pred cCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 143 ENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 143 ~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
.... ..+.++.++++.++++. . ...+++|+|+|+||..+..+|.+..+ .++++++.+++..
T Consensus 56 ~~~~--~~~~~~~~~~~~~~i~~----~---~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 56 ELPP--GYSIAHMADDVLQLLDA----L---NIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSR 116 (257)
T ss_pred CCcc--cCCHHHHHHHHHHHHHH----h---CCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCC
Confidence 3222 23556667777776653 2 23579999999999998888875332 2678887777654
Q ss_pred c
Q 015858 223 E 223 (399)
Q Consensus 223 ~ 223 (399)
+
T Consensus 117 ~ 117 (257)
T TIGR03611 117 P 117 (257)
T ss_pred C
Confidence 4
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.36 E-value=2.7e-06 Score=82.28 Aligned_cols=123 Identities=18% Similarity=0.148 Sum_probs=83.7
Q ss_pred EEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceE
Q 015858 50 GYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSII 129 (399)
Q Consensus 50 Gyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 129 (399)
=|++++ +.+++|.-. ++ ..|.||+++|.++++..+..+.+ .| .+.++++
T Consensus 11 ~~~~~~---~~~i~y~~~---G~--~~~~vlllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi 59 (294)
T PLN02824 11 RTWRWK---GYNIRYQRA---GT--SGPALVLVHGFGGNADHWRKNTP----------------VL-------AKSHRVY 59 (294)
T ss_pred ceEEEc---CeEEEEEEc---CC--CCCeEEEECCCCCChhHHHHHHH----------------HH-------HhCCeEE
Confidence 367775 567776431 21 23789999999999988754422 11 2346899
Q ss_pred EeeCCCccccccccCCC----CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 130 YLDSPAGVGLSYSENKT----DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 130 fiD~PvG~GfSy~~~~~----~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
.+|.| |.|.|-..+.. ....+.++.|+++.++|... ...+++|+|+|.||..+-.+|.+-.+
T Consensus 60 ~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~------ 125 (294)
T PLN02824 60 AIDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE------ 125 (294)
T ss_pred EEcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh------
Confidence 99998 99999643221 11245667777777777643 23689999999999998888765332
Q ss_pred CCeeeeeeeeecCCcc
Q 015858 206 KPVLNFKGYLVGNGVT 221 (399)
Q Consensus 206 ~~~inLkGi~igNg~~ 221 (399)
.++++++.|+..
T Consensus 126 ----~v~~lili~~~~ 137 (294)
T PLN02824 126 ----LVRGVMLINISL 137 (294)
T ss_pred ----heeEEEEECCCc
Confidence 378888888754
No 11
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.36 E-value=2.1e-06 Score=80.56 Aligned_cols=128 Identities=22% Similarity=0.303 Sum_probs=79.1
Q ss_pred EEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCcccc
Q 015858 48 YSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS 126 (399)
Q Consensus 48 ~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 126 (399)
..++++++ +..+.|.-+. .+...|.||+++||||+++.+ ..+.+ .+.. +-.
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~----------------~l~~------~g~ 54 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE----------------LLKE------EGR 54 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH----------------HHHh------cCC
Confidence 35566665 3445454322 233468899999999998653 22211 1111 136
Q ss_pred ceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCC
Q 015858 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (399)
Q Consensus 127 nllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 206 (399)
+++.+|.| |.|.|..........+.++.++++..++.. +...+++|+|+|+||..+..+|..-
T Consensus 55 ~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~--------- 117 (288)
T TIGR01250 55 EVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY--------- 117 (288)
T ss_pred EEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------
Confidence 79999988 999986432211013455666666555542 2235799999999999988888642
Q ss_pred CeeeeeeeeecCCcc
Q 015858 207 PVLNFKGYLVGNGVT 221 (399)
Q Consensus 207 ~~inLkGi~igNg~~ 221 (399)
.-.++++++.++..
T Consensus 118 -p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 118 -GQHLKGLIISSMLD 131 (288)
T ss_pred -ccccceeeEecccc
Confidence 22377888877754
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.31 E-value=7.5e-06 Score=79.67 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=89.0
Q ss_pred CCCccccCCCCCCCCCcceEEEEEEecCCCC--eeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCC
Q 015858 29 ETALIAQIPGFSGNLPSKHYSGYVTVDESHG--RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAP 106 (399)
Q Consensus 29 ~~~~v~~lpg~~~~~~~~~~sGyl~v~~~~~--~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~ 106 (399)
++.+++.||.++. .-.|++++...| .+++|.- .+++ +.|.||.++|.|+.+..+..+. |
T Consensus 7 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w~~~~---~------ 67 (302)
T PRK00870 7 PDSRFENLPDYPF------APHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLYRKMI---P------ 67 (302)
T ss_pred CcccccCCcCCCC------CceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhHHHHH---H------
Confidence 4566777886542 456788875333 3566652 2333 4688999999988887764331 1
Q ss_pred CCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeeccc
Q 015858 107 TTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYA 186 (399)
Q Consensus 107 ~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 186 (399)
.|.. +-.+++.+|.| |.|.|-.... ....+.++.++++.++|.. +...++.|+|+|+|
T Consensus 68 -------~L~~------~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~G 125 (302)
T PRK00870 68 -------ILAA------AGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWG 125 (302)
T ss_pred -------HHHh------CCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChH
Confidence 1111 23679999988 9999843211 1113455666666666543 22358999999999
Q ss_pred ccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 187 GIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 187 G~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
|..+-.+|.+-.+ .++++++.++.
T Consensus 126 g~ia~~~a~~~p~----------~v~~lvl~~~~ 149 (302)
T PRK00870 126 GLIGLRLAAEHPD----------RFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHhChh----------heeEEEEeCCC
Confidence 9988877764221 27788877764
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.29 E-value=6.3e-06 Score=77.86 Aligned_cols=123 Identities=17% Similarity=0.107 Sum_probs=79.9
Q ss_pred EEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEE
Q 015858 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (399)
Q Consensus 51 yl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (399)
|++++ +.+++|- +..+.+.|+||+++|.+|.+..+..+.+ .| .+..+++.
T Consensus 10 ~~~~~---~~~~~~~----~~g~~~~~~vv~~hG~~~~~~~~~~~~~----------------~l-------~~~~~vi~ 59 (278)
T TIGR03056 10 RVTVG---PFHWHVQ----DMGPTAGPLLLLLHGTGASTHSWRDLMP----------------PL-------ARSFRVVA 59 (278)
T ss_pred eeeEC---CEEEEEE----ecCCCCCCeEEEEcCCCCCHHHHHHHHH----------------HH-------hhCcEEEe
Confidence 44554 5566553 2234456899999999888776533211 12 12368999
Q ss_pred eeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeee
Q 015858 131 LDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (399)
Q Consensus 131 iD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in 210 (399)
+|.| |.|.|..... ...+....++++.++++. +...+++|+|+|+||..+..+|.+. .-.
T Consensus 60 ~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~ 119 (278)
T TIGR03056 60 PDLP-GHGFTRAPFR--FRFTLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVT 119 (278)
T ss_pred ecCC-CCCCCCCccc--cCCCHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------Ccc
Confidence 9988 9999864322 124566777777777653 2235789999999998877776532 123
Q ss_pred eeeeeecCCccCc
Q 015858 211 FKGYLVGNGVTDE 223 (399)
Q Consensus 211 LkGi~igNg~~d~ 223 (399)
++++++.++..++
T Consensus 120 v~~~v~~~~~~~~ 132 (278)
T TIGR03056 120 PRMVVGINAALMP 132 (278)
T ss_pred cceEEEEcCcccc
Confidence 6788888886654
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.24 E-value=6.4e-06 Score=78.73 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=82.6
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc-ccceEEeeCCCc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPAG 136 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiD~PvG 136 (399)
+|..|+|.+++.. +..+|+||.++|..++|..+-.+.+ . +.+ -..++-+|.| |
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~----------------~-------l~~~g~~via~D~~-G 62 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAE----------------N-------ISSLGILVFSHDHI-G 62 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHH----------------H-------HHhCCCEEEEccCC-C
Confidence 4778999877764 3446999999999777766533311 1 112 2569999988 9
Q ss_pred cccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeee
Q 015858 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (399)
Q Consensus 137 ~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~i 216 (399)
.|.|-.... ...+-....+|+.+++....+.++ ..+++|+|+|.||..+..+|.+ . +-+++|+++
T Consensus 63 ~G~S~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~---~-------p~~i~~lil 127 (276)
T PHA02857 63 HGRSNGEKM--MIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK---N-------PNLFTAMIL 127 (276)
T ss_pred CCCCCCccC--CcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh---C-------ccccceEEE
Confidence 999853211 112334455667777765444443 4689999999999877666643 1 124899999
Q ss_pred cCCccCc
Q 015858 217 GNGVTDE 223 (399)
Q Consensus 217 gNg~~d~ 223 (399)
.+|.+++
T Consensus 128 ~~p~~~~ 134 (276)
T PHA02857 128 MSPLVNA 134 (276)
T ss_pred ecccccc
Confidence 9987663
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.21 E-value=9.2e-06 Score=79.52 Aligned_cols=126 Identities=21% Similarity=0.301 Sum_probs=76.9
Q ss_pred EEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccce
Q 015858 49 SGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSI 128 (399)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 128 (399)
.+|+.+. .+..++|.-. +.+. .|-||+++|+||.++..... . .+ . .+..++
T Consensus 6 ~~~~~~~--~~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~~--------~---------~~--~----~~~~~v 56 (306)
T TIGR01249 6 SGYLNVS--DNHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGCR--------R---------FF--D----PETYRI 56 (306)
T ss_pred CCeEEcC--CCcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHHH--------h---------cc--C----ccCCEE
Confidence 4788887 3677887642 2233 34578899999886532110 0 00 0 134789
Q ss_pred EEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCe
Q 015858 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (399)
Q Consensus 129 lfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~ 208 (399)
+.+|.| |.|.|..... ....+..+.++++..+++ .. ...+++++|+||||..+-.+|.+-.+
T Consensus 57 i~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~--------- 118 (306)
T TIGR01249 57 VLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE--------- 118 (306)
T ss_pred EEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH---------
Confidence 999988 9999964221 122334455555554443 32 23579999999999887777765322
Q ss_pred eeeeeeeecCCccC
Q 015858 209 LNFKGYLVGNGVTD 222 (399)
Q Consensus 209 inLkGi~igNg~~d 222 (399)
.++++++.+....
T Consensus 119 -~v~~lvl~~~~~~ 131 (306)
T TIGR01249 119 -VVTGLVLRGIFLL 131 (306)
T ss_pred -hhhhheeeccccC
Confidence 2677777766543
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.12 E-value=1.4e-05 Score=75.05 Aligned_cols=104 Identities=18% Similarity=0.113 Sum_probs=74.1
Q ss_pred CCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCcc
Q 015858 71 GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT 150 (399)
Q Consensus 71 ~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~ 150 (399)
..+.++|.||+++|.+|.+..+..+.+ . +.+..+++.+|.| |-|.|... .. .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~----------------~-------l~~~~~vi~~D~~-G~G~s~~~--~~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLAR----------------D-------LVNDHDIIQVDMR-NHGLSPRD--PV--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHH----------------H-------HhhCCeEEEECCC-CCCCCCCC--CC--C
Confidence 456678999999999998876543311 1 1234689999998 99988532 12 3
Q ss_pred ChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCC
Q 015858 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg 219 (399)
+..+.++|+.++|..+ ...+++|+|+|.||..+..+|.+..+ .++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEec
Confidence 5667788888888642 23579999999999998888865332 2677777653
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.10 E-value=1.7e-05 Score=78.21 Aligned_cols=141 Identities=18% Similarity=0.168 Sum_probs=87.2
Q ss_pred cceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc
Q 015858 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (399)
Q Consensus 45 ~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (399)
.+...+++... +|..++|+..........+|+|++++|..+.++.. +.+ + ...+.+
T Consensus 30 ~~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~--~~~-----------------~---~~~L~~ 85 (330)
T PLN02298 30 IKGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWT--FQS-----------------T---AIFLAQ 85 (330)
T ss_pred CccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCccee--hhH-----------------H---HHHHHh
Confidence 44556777765 47889886543322223568999999985332210 100 0 001222
Q ss_pred -ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhccc
Q 015858 125 -VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (399)
Q Consensus 125 -~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 203 (399)
-.+++.+|.| |.|.|-.. .++..+.+..++|+..+++.... ..++...+++|+|+|.||..+-.++.+ .
T Consensus 86 ~Gy~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~---~--- 155 (330)
T PLN02298 86 MGFACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLA---N--- 155 (330)
T ss_pred CCCEEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhc---C---
Confidence 3789999999 99998432 22334556678888888865433 223444689999999999877655532 1
Q ss_pred CCCCeeeeeeeeecCCccCc
Q 015858 204 GEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 204 ~~~~~inLkGi~igNg~~d~ 223 (399)
.-.++|+++.+++.+.
T Consensus 156 ----p~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 156 ----PEGFDGAVLVAPMCKI 171 (330)
T ss_pred ----cccceeEEEecccccC
Confidence 1248899998887643
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.04 E-value=4e-05 Score=74.11 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=80.9
Q ss_pred EEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEE
Q 015858 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (399)
Q Consensus 51 yl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (399)
+++++ +.+++|.-. + +.|.||+++|.|+.+..+-.+.+ .| .+...++-
T Consensus 11 ~~~~~---g~~i~y~~~---G---~g~~vvllHG~~~~~~~w~~~~~----------------~L-------~~~~~via 58 (295)
T PRK03592 11 RVEVL---GSRMAYIET---G---EGDPIVFLHGNPTSSYLWRNIIP----------------HL-------AGLGRCLA 58 (295)
T ss_pred EEEEC---CEEEEEEEe---C---CCCEEEEECCCCCCHHHHHHHHH----------------HH-------hhCCEEEE
Confidence 45554 567777532 1 34789999999999888743311 11 22347999
Q ss_pred eeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeee
Q 015858 131 LDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (399)
Q Consensus 131 iD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in 210 (399)
+|.| |.|.|-... .+ .+....|+|+..+++.. ...+++|+|+|.||.++-.+|.+-.+ .
T Consensus 59 ~D~~-G~G~S~~~~-~~--~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~----------~ 117 (295)
T PRK03592 59 PDLI-GMGASDKPD-ID--YTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPD----------R 117 (295)
T ss_pred EcCC-CCCCCCCCC-CC--CCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChh----------h
Confidence 9988 999995322 12 35566777777776542 23689999999999988777765332 2
Q ss_pred eeeeeecCCccCc
Q 015858 211 FKGYLVGNGVTDE 223 (399)
Q Consensus 211 LkGi~igNg~~d~ 223 (399)
++++++.|+...+
T Consensus 118 v~~lil~~~~~~~ 130 (295)
T PRK03592 118 VRGIAFMEAIVRP 130 (295)
T ss_pred eeEEEEECCCCCC
Confidence 7899998885443
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.00 E-value=7.8e-05 Score=74.40 Aligned_cols=128 Identities=21% Similarity=0.251 Sum_probs=80.8
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAG 136 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG 136 (399)
.|..+||...... +...+|+||+++|..+.++.+ -.+ .+ .|.. +-.+++-+|.| |
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~---~~-------------~l~~------~g~~v~~~D~~-G 125 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGI---AR-------------KIAS------SGYGVFAMDYP-G 125 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHH---HH-------------HHHh------CCCEEEEecCC-C
Confidence 4778888655432 224569999999986654432 111 00 1111 12679999998 9
Q ss_pred cccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeee
Q 015858 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (399)
Q Consensus 137 ~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~i 216 (399)
.|.|-.. .++..+-+..++|+.+++.. +...+++...+++|+|+|+||..+-.+|.+ + .-.++|+++
T Consensus 126 ~G~S~~~--~~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-------p~~v~glVL 192 (349)
T PLN02385 126 FGLSEGL--HGYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-------PNAWDGAIL 192 (349)
T ss_pred CCCCCCC--CCCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-------cchhhheeE
Confidence 9998532 12323555677788777765 333345555689999999999887666543 1 123788888
Q ss_pred cCCccC
Q 015858 217 GNGVTD 222 (399)
Q Consensus 217 gNg~~d 222 (399)
.+|...
T Consensus 193 i~p~~~ 198 (349)
T PLN02385 193 VAPMCK 198 (349)
T ss_pred eccccc
Confidence 887643
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.00 E-value=4.3e-05 Score=73.29 Aligned_cols=117 Identities=17% Similarity=0.078 Sum_probs=76.4
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
+..+.|+..+. + ...|.||+++|-++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE----------------AL-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH----------------Hh-------ccCceEEEECCC-CCC
Confidence 56788876431 2 234678999997777666532211 11 234689999988 999
Q ss_pred cccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecC
Q 015858 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (399)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igN 218 (399)
.|-.. . ...+.+..++++.+++... .-.+++|+|+|+||..+-.+|.+-.+ .++++++.|
T Consensus 64 ~S~~~-~--~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~----------~v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTP-R--HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE----------RCKKLILAA 123 (276)
T ss_pred CCCCC-C--CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH----------HhhheEEec
Confidence 99432 1 1234455666666666542 23589999999999988877764322 378888888
Q ss_pred CccC
Q 015858 219 GVTD 222 (399)
Q Consensus 219 g~~d 222 (399)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 7653
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.98 E-value=7.9e-05 Score=72.34 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=75.4
Q ss_pred eEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcccc
Q 015858 47 HYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS 126 (399)
Q Consensus 47 ~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 126 (399)
..+.+++++ +..++|.- .+ ..|.||+++|.|..+..+-.+.+ . +.+..
T Consensus 14 ~~~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~~~~~~----------------~-------l~~~~ 61 (286)
T PRK03204 14 FESRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLYRDIIV----------------A-------LRDRF 61 (286)
T ss_pred ccceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHHHHHHH----------------H-------HhCCc
Confidence 445678876 45676542 22 24789999999866555432211 1 22347
Q ss_pred ceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCC
Q 015858 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (399)
Q Consensus 127 nllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 206 (399)
+++-+|.| |.|.|-.. .+...+....++++..+++. . ...+++|+|+|+||..+-.+|..-
T Consensus 62 ~vi~~D~~-G~G~S~~~--~~~~~~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~~~--------- 122 (286)
T PRK03204 62 RCVAPDYL-GFGLSERP--SGFGYQIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAVER--------- 122 (286)
T ss_pred EEEEECCC-CCCCCCCC--CccccCHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHHhC---------
Confidence 89999988 99988432 12223344555555555543 2 235799999999998765555421
Q ss_pred CeeeeeeeeecCCcc
Q 015858 207 PVLNFKGYLVGNGVT 221 (399)
Q Consensus 207 ~~inLkGi~igNg~~ 221 (399)
.-.+++++++++..
T Consensus 123 -p~~v~~lvl~~~~~ 136 (286)
T PRK03204 123 -ADRVRGVVLGNTWF 136 (286)
T ss_pred -hhheeEEEEECccc
Confidence 12478888887754
No 22
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.97 E-value=2.3e-05 Score=70.13 Aligned_cols=103 Identities=22% Similarity=0.178 Sum_probs=70.8
Q ss_pred EEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHH
Q 015858 79 VLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASD 158 (399)
Q Consensus 79 vlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d 158 (399)
||+++|.++.+..+..+.+ .| . +-.+++.+|.| |.|.|-.... ....+..+.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------------~l-~------~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------------AL-A------RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------------HH-H------TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------------HH-h------CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6899999998866544321 12 1 35679999998 9999965332 112445566677
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
+.++|+. .. ..+++|+|+|+||..+-.++.+..+ .++|+++.++....
T Consensus 56 l~~~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 56 LAELLDA----LG---IKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPL 103 (228)
T ss_dssp HHHHHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSH
T ss_pred hhhcccc----cc---ccccccccccccccccccccccccc----------ccccceeecccccc
Confidence 7766653 32 2689999999999998888865322 48999999988754
No 23
>PRK06489 hypothetical protein; Provisional
Probab=97.85 E-value=0.00014 Score=72.96 Aligned_cols=141 Identities=16% Similarity=0.024 Sum_probs=76.5
Q ss_pred CcceEEEEEEecCCCCeeEEEEEEecC---CCCCCCCeEEEECCCCCchhhhh--hhhhcCCceeeCCCCCCCCCccccc
Q 015858 44 PSKHYSGYVTVDESHGRNLFYYFVESE---GNPSKDPVVLWLNGGPGCSSFDG--FIYEHGPFNFEAPTTKGSLPKLHVN 118 (399)
Q Consensus 44 ~~~~~sGyl~v~~~~~~~lfy~f~~s~---~~p~~~PlvlWlnGGPG~SS~~g--~f~e~GP~~~~~~~~~~~~~~l~~n 118 (399)
++...+|. .++ +.+++|.-+... .++++.|.|+.++|++|.+..+- .+.+ ..+. ..
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~---~l~~------------~~ 98 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAG---ELFG------------PG 98 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHH---HhcC------------CC
Confidence 45556674 332 567777643210 01223688999999998765531 1100 0000 00
Q ss_pred CCCCccccceEEeeCCCccccccccCCCC---C-ccChHHHHHHHHHHHHHHHHHCcCCCCCCE-EEEeecccccchHHH
Q 015858 119 PYSWTKVSSIIYLDSPAGVGLSYSENKTD---Y-VTGDLKTASDTHTFLLKWFELYPEFLANPF-FIAGESYAGIYVPTL 193 (399)
Q Consensus 119 ~~sW~~~anllfiD~PvG~GfSy~~~~~~---~-~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvp~l 193 (399)
..--.+..+++.+|.| |.|.|-...... . ..+.++.++++..++.+ . +.-.++ +|+|+|+||..+-.+
T Consensus 99 ~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~---~---lgi~~~~~lvG~SmGG~vAl~~ 171 (360)
T PRK06489 99 QPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE---G---LGVKHLRLILGTSMGGMHAWMW 171 (360)
T ss_pred CcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH---h---cCCCceeEEEEECHHHHHHHHH
Confidence 0011245789999998 999985321110 0 13444555555554422 1 222355 489999999888777
Q ss_pred HHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 194 AYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 194 a~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
|.+-.+. ++++++.++.
T Consensus 172 A~~~P~~----------V~~LVLi~s~ 188 (360)
T PRK06489 172 GEKYPDF----------MDALMPMASQ 188 (360)
T ss_pred HHhCchh----------hheeeeeccC
Confidence 7653322 6666766553
No 24
>PLN02578 hydrolase
Probab=97.84 E-value=0.00021 Score=71.58 Aligned_cols=112 Identities=17% Similarity=0.187 Sum_probs=73.0
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
+.+++|.-.. +.|-||.++|-++.+..+..+. +.| .+..+++.+|.| |.|
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w~~~~----------------~~l-------~~~~~v~~~D~~-G~G 124 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHWRYNI----------------PEL-------AKKYKVYALDLL-GFG 124 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHHHHHH----------------HHH-------hcCCEEEEECCC-CCC
Confidence 5677775322 2355789998776654442221 111 234789999998 999
Q ss_pred cccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecC
Q 015858 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (399)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igN 218 (399)
.|-.. ....+....++++.+|++... ..+++|+|+|+||..+..+|.+-.+ .++++++.|
T Consensus 125 ~S~~~---~~~~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~ 184 (354)
T PLN02578 125 WSDKA---LIEYDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLN 184 (354)
T ss_pred CCCCc---ccccCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEEC
Confidence 88432 112345556677777776532 3689999999999988888775433 378888877
Q ss_pred Cc
Q 015858 219 GV 220 (399)
Q Consensus 219 g~ 220 (399)
+.
T Consensus 185 ~~ 186 (354)
T PLN02578 185 SA 186 (354)
T ss_pred CC
Confidence 64
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.83 E-value=8.5e-05 Score=67.80 Aligned_cols=90 Identities=20% Similarity=0.147 Sum_probs=60.2
Q ss_pred CCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccCh
Q 015858 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~ 152 (399)
+..+|++|+++|-++.+..+..+.+ .| .+..+++.+|.| |.|.|-.. ....+.
T Consensus 10 ~~~~~~li~~hg~~~~~~~~~~~~~----------------~l-------~~~~~v~~~d~~-G~G~s~~~---~~~~~~ 62 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRMWDPVLP----------------AL-------TPDFRVLRYDKR-GHGLSDAP---EGPYSI 62 (251)
T ss_pred CCCCCeEEEEcCcccchhhHHHHHH----------------Hh-------hcccEEEEecCC-CCCCCCCC---CCCCCH
Confidence 3467999999987555554422211 11 124689999998 99988432 122356
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
.+.++++.++++.+ ...+++|+|+|+||..+-.+|.+
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 66777777776542 23579999999999988877765
No 26
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.78 E-value=8.4e-05 Score=74.92 Aligned_cols=129 Identities=21% Similarity=0.243 Sum_probs=80.4
Q ss_pred eEEEEEEec--CCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc-
Q 015858 61 NLFYYFVES--EGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV- 137 (399)
Q Consensus 61 ~lfy~f~~s--~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~- 137 (399)
.-.||++++ +.+|++|||+++++|| |.+.+.=|+.+. ...+=+...+...||.+|-..-.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~----------~L~~i~~~l~~~SILvLDYsLt~~ 167 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIE----------FLLNIYKLLPEVSILVLDYSLTSS 167 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHH----------HHHHHHHHcCCCeEEEEecccccc
Confidence 446899985 3368889999999999 566666665442 00111222223489999965322
Q ss_pred ---ccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeee
Q 015858 138 ---GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGY 214 (399)
Q Consensus 138 ---GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi 214 (399)
|+- +.+ +..++.+..+...+.. ...++.|.|+|-||+-+-.+.+++.+.+.. +-=|.+
T Consensus 168 ~~~~~~-------yPt----QL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~Pk~~ 228 (374)
T PF10340_consen 168 DEHGHK-------YPT----QLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PYPKSA 228 (374)
T ss_pred ccCCCc-------Cch----HHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CCCcee
Confidence 222 222 2222333333333222 236899999999999999999998765421 123688
Q ss_pred eecCCccCccc
Q 015858 215 LVGNGVTDEEI 225 (399)
Q Consensus 215 ~igNg~~d~~~ 225 (399)
++.+||+.+..
T Consensus 229 iLISPWv~l~~ 239 (374)
T PF10340_consen 229 ILISPWVNLVP 239 (374)
T ss_pred EEECCCcCCcC
Confidence 88899999873
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.76 E-value=0.00021 Score=72.84 Aligned_cols=131 Identities=15% Similarity=0.044 Sum_probs=82.6
Q ss_pred CcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCc
Q 015858 44 PSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT 123 (399)
Q Consensus 44 ~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 123 (399)
+.++-+|+.... .+-.+||.- ..+...|.||.++|.|+.+..+-.+.+ .| .
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~~----~G~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~ 151 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCVE----SGSNNNPPVLLIHGFPSQAYSYRKVLP----------------VL-------S 151 (383)
T ss_pred cccccceeEEcC--CceEEEEEe----cCCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------h
Confidence 455555555432 355666552 234456899999999988766533311 11 1
Q ss_pred cccceEEeeCCCccccccccCCC-CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcc
Q 015858 124 KVSSIIYLDSPAGVGLSYSENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (399)
Q Consensus 124 ~~anllfiD~PvG~GfSy~~~~~-~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~ 202 (399)
+..+++-+|.| |.|+|...... ....+.++.++++..|++.. ...+++|+|+|+||..+-.+|.+-.
T Consensus 152 ~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P---- 219 (383)
T PLN03084 152 KNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHP---- 219 (383)
T ss_pred cCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhCh----
Confidence 23689999988 99999643221 11245666777777777642 2357999999999965544444321
Q ss_pred cCCCCeeeeeeeeecCCcc
Q 015858 203 AGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 203 ~~~~~~inLkGi~igNg~~ 221 (399)
-.++++++.|+..
T Consensus 220 ------~~v~~lILi~~~~ 232 (383)
T PLN03084 220 ------DKIKKLILLNPPL 232 (383)
T ss_pred ------HhhcEEEEECCCC
Confidence 2388899988764
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.76 E-value=0.00012 Score=68.18 Aligned_cols=100 Identities=24% Similarity=0.255 Sum_probs=67.9
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
.|.||+++|.+|++..+-.+.+ .+ +..+++.+|.| |.|.|.... ..+..+.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~----------------~l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGE----------------AL--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHH----------------Hc--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 5889999999998877643311 11 23789999988 999985321 1244556
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
++++.++|.. . .-.+++++|+|+||..+-.+|.+..+ -.++++++.++.
T Consensus 53 ~~~l~~~l~~----~---~~~~~~lvG~S~Gg~va~~~a~~~~~---------~~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS----Y---NILPYWLVGYSLGGRIAMYYACQGLA---------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH----c---CCCCeEEEEECHHHHHHHHHHHhCCc---------ccccEEEEeCCC
Confidence 6666666643 2 34689999999999888877775311 116777777654
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.74 E-value=0.00037 Score=71.28 Aligned_cols=128 Identities=20% Similarity=0.111 Sum_probs=83.4
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~ 137 (399)
.+..+|++.+... ....+|+||+++|.++.+..+-.+.+ .|.. +-.+++-+|.| |-
T Consensus 119 ~~~~l~~~~~~p~-~~~~~~~Vl~lHG~~~~~~~~~~~a~----------------~L~~------~Gy~V~~~D~r-Gh 174 (395)
T PLN02652 119 RRNALFCRSWAPA-AGEMRGILIIIHGLNEHSGRYLHFAK----------------QLTS------CGFGVYAMDWI-GH 174 (395)
T ss_pred CCCEEEEEEecCC-CCCCceEEEEECCchHHHHHHHHHHH----------------HHHH------CCCEEEEeCCC-CC
Confidence 3457777766553 23346899999999776654432211 1111 13579999988 99
Q ss_pred ccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeec
Q 015858 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (399)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~ig 217 (399)
|.|-.. ..+..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++. +.+ ..-.++|+++.
T Consensus 175 G~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~ 241 (395)
T PLN02652 175 GGSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLT 241 (395)
T ss_pred CCCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEE
Confidence 988532 22334556667888888877666665 358999999999988765442 111 01248899999
Q ss_pred CCccC
Q 015858 218 NGVTD 222 (399)
Q Consensus 218 Ng~~d 222 (399)
+|+++
T Consensus 242 sP~l~ 246 (395)
T PLN02652 242 SPALR 246 (395)
T ss_pred Ccccc
Confidence 88864
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.71 E-value=0.00017 Score=65.52 Aligned_cols=105 Identities=23% Similarity=0.258 Sum_probs=66.3
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
+|.||+++|.+|.+..+..+. ..|. +-.+++-+|.| |.|.|..... ....+..+.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~----------------~~L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI----------------ELLG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH----------------HHhc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 488999999988877653221 1121 23679999987 9998843211 111333444
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
++++ +..+.+.. ..++++|+|+|+||..+..+|.+.. -.++++++.++..
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGSP 105 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCCC
Confidence 4442 33333333 2468999999999999888887532 1378888877653
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=97.70 E-value=0.00029 Score=69.90 Aligned_cols=126 Identities=13% Similarity=0.007 Sum_probs=79.7
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~ 137 (399)
.|..++|+.+... ..+|+||.++|-.+.+..+..+ .+. +.. +-.+++-+|.| |.
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~---~~~-------------l~~------~g~~v~~~D~~-G~ 92 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAEL---AYD-------------LFH------LGYDVLIIDHR-GQ 92 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHHHHHH---HHH-------------HHH------CCCeEEEEcCC-CC
Confidence 3677888766532 3468999999986554433222 110 111 22579999988 99
Q ss_pred ccccccCCC---CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeee
Q 015858 138 GLSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGY 214 (399)
Q Consensus 138 GfSy~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi 214 (399)
|.|-..... ....+-+..++|+..+++.....++ ..+++++|+|+||..+-.+|.+ .. -.++|+
T Consensus 93 G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~---~p-------~~v~~l 159 (330)
T PRK10749 93 GRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQR---HP-------GVFDAI 159 (330)
T ss_pred CCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHh---CC-------CCcceE
Confidence 998532111 1113455677778877776554433 4689999999999877666653 11 237889
Q ss_pred eecCCccC
Q 015858 215 LVGNGVTD 222 (399)
Q Consensus 215 ~igNg~~d 222 (399)
++.+|...
T Consensus 160 vl~~p~~~ 167 (330)
T PRK10749 160 ALCAPMFG 167 (330)
T ss_pred EEECchhc
Confidence 99888754
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.70 E-value=0.00033 Score=70.51 Aligned_cols=127 Identities=19% Similarity=0.105 Sum_probs=76.7
Q ss_pred EEEEEecCCCCe-eEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccc
Q 015858 49 SGYVTVDESHGR-NLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (399)
Q Consensus 49 sGyl~v~~~~~~-~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (399)
..|+..+ +. .++|.-..+.....+.|.||.++|.++.+..+..+.+ .| .+...
T Consensus 63 ~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~----------------~L-------~~~~~ 116 (360)
T PLN02679 63 CKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIG----------------VL-------AKNYT 116 (360)
T ss_pred CceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hcCCE
Confidence 3455554 34 6766533211001134788999999988877643311 11 12367
Q ss_pred eEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCC
Q 015858 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (399)
Q Consensus 128 llfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~ 207 (399)
++.+|.| |.|.|-... +...+....++++.++|... ...+++|+|+|+||..+-.+|..- .
T Consensus 117 via~Dl~-G~G~S~~~~--~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~--~------- 177 (360)
T PLN02679 117 VYAIDLL-GFGASDKPP--GFSYTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASES--T------- 177 (360)
T ss_pred EEEECCC-CCCCCCCCC--CccccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhc--C-------
Confidence 9999998 999984321 22235566777777777532 235899999999997654444321 1
Q ss_pred eeeeeeeeecCCc
Q 015858 208 VLNFKGYLVGNGV 220 (399)
Q Consensus 208 ~inLkGi~igNg~ 220 (399)
.-.++++++.|+.
T Consensus 178 P~rV~~LVLi~~~ 190 (360)
T PLN02679 178 RDLVRGLVLLNCA 190 (360)
T ss_pred hhhcCEEEEECCc
Confidence 1137888888865
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.69 E-value=0.00039 Score=71.23 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=68.5
Q ss_pred CCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccCh-
Q 015858 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD- 152 (399)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~- 152 (399)
.+.|.||+++|.++.+..+.... . .| .+..+++-+|.| |.|.|-.. ++...+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-------~---------~L-------~~~~~vi~~D~r-G~G~S~~~---~~~~~~~ 155 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-------D---------AL-------ASRFRVIAIDQL-GWGGSSRP---DFTCKST 155 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-------H---------HH-------HhCCEEEEECCC-CCCCCCCC---CcccccH
Confidence 36699999999987665542210 0 12 233679999988 99988421 222222
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
.+..+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|.+-. -.++++++.++..
T Consensus 156 ~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 156 EETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc----------hhhcEEEEECCcc
Confidence 333334556666776543 2358999999999988777665421 2377888887753
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.55 E-value=0.00055 Score=68.07 Aligned_cols=114 Identities=20% Similarity=0.115 Sum_probs=71.5
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
+..++|+ +..+.+.|.||+++|.+|.+..+..+.+ .| .+..+++-+|.| |.|
T Consensus 118 ~~~i~~~----~~g~~~~~~vl~~HG~~~~~~~~~~~~~----------------~l-------~~~~~v~~~d~~-g~G 169 (371)
T PRK14875 118 GRTVRYL----RLGEGDGTPVVLIHGFGGDLNNWLFNHA----------------AL-------AAGRPVIALDLP-GHG 169 (371)
T ss_pred CcEEEEe----cccCCCCCeEEEECCCCCccchHHHHHH----------------HH-------hcCCEEEEEcCC-CCC
Confidence 3456554 2233456889999999888776644322 11 112679999988 999
Q ss_pred cccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecC
Q 015858 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (399)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igN 218 (399)
.|-... ...+..+.++++..+++ .. ...+++|+|+|+||..+..+|..-. -.++++++.+
T Consensus 170 ~s~~~~---~~~~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~ 229 (371)
T PRK14875 170 ASSKAV---GAGSLDELAAAVLAFLD----AL---GIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIA 229 (371)
T ss_pred CCCCCC---CCCCHHHHHHHHHHHHH----hc---CCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEEC
Confidence 883221 12344555555555553 32 3358999999999999888876521 2366777666
Q ss_pred Cc
Q 015858 219 GV 220 (399)
Q Consensus 219 g~ 220 (399)
+.
T Consensus 230 ~~ 231 (371)
T PRK14875 230 PA 231 (371)
T ss_pred cC
Confidence 54
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.54 E-value=0.0004 Score=68.95 Aligned_cols=135 Identities=13% Similarity=0.200 Sum_probs=86.0
Q ss_pred CcceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhh--hhhhhhcCCceeeCCCCCCCCCcccccCCC
Q 015858 44 PSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF--DGFIYEHGPFNFEAPTTKGSLPKLHVNPYS 121 (399)
Q Consensus 44 ~~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~--~g~f~e~GP~~~~~~~~~~~~~~l~~n~~s 121 (399)
+.+-.+-|+.+.. +... |.++-...+++++-++.++|= |++++ .-+| .+
T Consensus 62 ~v~~~~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHGy-GAg~g~f~~Nf------------------------~~ 112 (365)
T KOG4409|consen 62 PVPYSKKYVRIPN--GIEI--WTITVSNESANKTPLVLIHGY-GAGLGLFFRNF------------------------DD 112 (365)
T ss_pred CCCcceeeeecCC--Ccee--EEEeecccccCCCcEEEEecc-chhHHHHHHhh------------------------hh
Confidence 3444566777762 3333 333333344667777788872 33322 1223 23
Q ss_pred CccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhc
Q 015858 122 WTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (399)
Q Consensus 122 W~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 201 (399)
..+..||-.||.| |-|.|-.. .+..+.+..-..+.+-+++|..... =.+.+|+|||+||..+...|.+-.++
T Consensus 113 La~~~~vyaiDll-G~G~SSRP---~F~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer- 184 (365)
T KOG4409|consen 113 LAKIRNVYAIDLL-GFGRSSRP---KFSIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER- 184 (365)
T ss_pred hhhcCceEEeccc-CCCCCCCC---CCCCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh-
Confidence 3447889999988 99999432 2333333333468889999998875 25899999999999887777665544
Q ss_pred ccCCCCeeeeeeeeecCCccCcc
Q 015858 202 DAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 202 ~~~~~~~inLkGi~igNg~~d~~ 224 (399)
++-+++.+||--+.
T Consensus 185 ---------V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ---------VEKLILVSPWGFPE 198 (365)
T ss_pred ---------hceEEEeccccccc
Confidence 56678888885443
No 36
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.53 E-value=0.0004 Score=66.11 Aligned_cols=107 Identities=19% Similarity=0.141 Sum_probs=63.1
Q ss_pred CCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHH
Q 015858 75 KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLK 154 (399)
Q Consensus 75 ~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~ 154 (399)
+.|.||+++|.++.+..+..+.. .+. .+ ..+..+++-+|.| |.|.|-.... +. .....
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~----~~~---------~l------~~~~~~vi~~D~~-G~G~S~~~~~-~~-~~~~~ 86 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYR----NIG---------PF------VDAGYRVILKDSP-GFNKSDAVVM-DE-QRGLV 86 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHH----HHH---------HH------HhCCCEEEEECCC-CCCCCCCCcC-cc-cccch
Confidence 34778999998765544321100 000 00 1123789999988 9999943211 11 11113
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
.++++.+++.. . ...+++++|+|+||..+-.+|.+-.+. ++++++.++.
T Consensus 87 ~~~~l~~~l~~----l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~----------v~~lvl~~~~ 135 (282)
T TIGR03343 87 NARAVKGLMDA----L---DIEKAHLVGNSMGGATALNFALEYPDR----------IGKLILMGPG 135 (282)
T ss_pred hHHHHHHHHHH----c---CCCCeeEEEECchHHHHHHHHHhChHh----------hceEEEECCC
Confidence 35555555543 2 346899999999999998888754332 5666666653
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.51 E-value=0.00031 Score=66.28 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=63.5
Q ss_pred CeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHH
Q 015858 77 PVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTA 156 (399)
Q Consensus 77 PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a 156 (399)
|.||.++|.++++..+-.+.+ .+.+..+++.+|.| |.|.|-.. .. .+.++.+
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~-----------------------~L~~~~~vi~~Dl~-G~G~S~~~--~~--~~~~~~~ 65 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDE-----------------------ELSSHFTLHLVDLP-GFGRSRGF--GA--LSLADMA 65 (256)
T ss_pred CeEEEECCCCCChhHHHHHHH-----------------------HHhcCCEEEEecCC-CCCCCCCC--CC--CCHHHHH
Confidence 569999999888887633311 12345789999988 99998532 11 2444444
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
+++.+ +...+++++|+|+||..+..+|.+-. -.++++++.|+.
T Consensus 66 ~~l~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~~ 108 (256)
T PRK10349 66 EAVLQ-----------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVASS 108 (256)
T ss_pred HHHHh-----------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecCc
Confidence 44332 12358999999999999888876422 237788887763
No 38
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.50 E-value=0.0011 Score=69.49 Aligned_cols=135 Identities=18% Similarity=0.163 Sum_probs=81.7
Q ss_pred cceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc
Q 015858 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (399)
Q Consensus 45 ~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (399)
.+...-|++.+ +..+||....... ....|.||+++|.+|.+..+.... + +.+.. .+.+
T Consensus 174 ~~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~------~---------~~L~~---~~~~ 231 (481)
T PLN03087 174 CKFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETL------F---------PNFSD---AAKS 231 (481)
T ss_pred cceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHH------H---------HHHHH---HhhC
Confidence 34455777776 4688887654332 223478999999999887763210 0 01111 1234
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
...++.+|.| |.|.|-... +...+.++.++++. +.+++.. ...+++|+|+|+||..+-.+|.+-.+
T Consensus 232 ~yrVia~Dl~-G~G~S~~p~--~~~ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 232 TYRLFAVDLL-GFGRSPKPA--DSLYTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CCEEEEECCC-CCCCCcCCC--CCcCCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 5689999988 999884321 11134444444442 1333333 34689999999999998877765322
Q ss_pred CCCeeeeeeeeecCCc
Q 015858 205 EKPVLNFKGYLVGNGV 220 (399)
Q Consensus 205 ~~~~inLkGi~igNg~ 220 (399)
.++++++.++.
T Consensus 298 -----~V~~LVLi~~~ 308 (481)
T PLN03087 298 -----AVKSLTLLAPP 308 (481)
T ss_pred -----hccEEEEECCC
Confidence 26777777753
No 39
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.42 E-value=0.00084 Score=69.11 Aligned_cols=79 Identities=22% Similarity=0.156 Sum_probs=53.7
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
.++|-+|.| |.|.|-... . ..+ .......+..|+...|.....++.|+|.|+||.+++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~-~~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------- 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---L-TQD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------- 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---c-ccc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-------
Confidence 679999999 999984321 1 111 1112234455666777666678999999999999998885411
Q ss_pred CCeeeeeeeeecCCccC
Q 015858 206 KPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 206 ~~~inLkGi~igNg~~d 222 (399)
-.++++++.+|..+
T Consensus 288 ---~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 ---PRLKAVACLGPVVH 301 (414)
T ss_pred ---cCceEEEEECCccc
Confidence 13788888877765
No 40
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.42 E-value=0.00089 Score=64.72 Aligned_cols=106 Identities=18% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChH
Q 015858 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (399)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~ 153 (399)
.++|.|++++|..+.++.+..+.+ .|.. +-.+++-+|.| |.|.|..... ...+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~----------------~L~~------~g~~vi~~dl~-g~G~s~~~~~--~~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRC----------------LMEN------SGYKVTCIDLK-SAGIDQSDAD--SVTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHH----------------HHHh------CCCEEEEeccc-CCCCCCCCcc--cCCCHH
Confidence 567999999998777666533211 1111 12579999998 9998743221 114555
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
+.++++.++|+ .... ..+++|+|+||||..+-.++.+..+ .++++++.++.
T Consensus 71 ~~~~~l~~~i~----~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~ 121 (273)
T PLN02211 71 EYNKPLIDFLS----SLPE--NEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHHHH----hcCC--CCCEEEEEECchHHHHHHHHHhChh----------heeEEEEeccc
Confidence 66666666664 3221 3689999999999987777754322 26677766554
No 41
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.39 E-value=0.0032 Score=60.87 Aligned_cols=42 Identities=17% Similarity=0.034 Sum_probs=30.4
Q ss_pred CCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 173 FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 173 ~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
....+++|+|+|+||..+-.+|.+-. =.+++++..+|..++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNP----------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCc----------ccceEEEEECCccCcc
Confidence 34468999999999987766665421 1267888888887753
No 42
>PLN02965 Probable pheophorbidase
Probab=97.36 E-value=0.00068 Score=64.26 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=65.2
Q ss_pred EEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHH
Q 015858 79 VLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASD 158 (399)
Q Consensus 79 vlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d 158 (399)
|+.++|.++.+..+-... ..|. .+...++-+|.| |.|.|-... ....+.++.|+|
T Consensus 6 vvllHG~~~~~~~w~~~~----------------~~L~------~~~~~via~Dl~-G~G~S~~~~--~~~~~~~~~a~d 60 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLA----------------TLLD------AAGFKSTCVDLT-GAGISLTDS--NTVSSSDQYNRP 60 (255)
T ss_pred EEEECCCCCCcCcHHHHH----------------HHHh------hCCceEEEecCC-cCCCCCCCc--cccCCHHHHHHH
Confidence 888999887665542221 1111 123579999998 999994221 122445667777
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
+.++|.. .+ ..++++++|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 61 l~~~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~----------~v~~lvl~~~~ 106 (255)
T PLN02965 61 LFALLSD----LP--PDHKVILVGHSIGGGSVTEALCKFTD----------KISMAIYVAAA 106 (255)
T ss_pred HHHHHHh----cC--CCCCEEEEecCcchHHHHHHHHhCch----------heeEEEEEccc
Confidence 7777753 21 11589999999999988888864322 26778877764
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.35 E-value=0.00058 Score=62.15 Aligned_cols=96 Identities=15% Similarity=0.104 Sum_probs=60.3
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
.|.||+++|.++.+..+-.+.+ .| .+..+++.+|.| |.|.|.... . .+..+.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~d~~-G~G~s~~~~--~--~~~~~~ 55 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE----------------EL-------SAHFTLHLVDLP-GHGRSRGFG--P--LSLADA 55 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH----------------hh-------ccCeEEEEecCC-cCccCCCCC--C--cCHHHH
Confidence 4789999998776666532211 11 123789999988 999884321 1 233333
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
++++.+. . ..+++++|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 56 ~~~~~~~-------~----~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~il~~~~ 99 (245)
T TIGR01738 56 AEAIAAQ-------A----PDPAIWLGWSLGGLVALHIAATHPD----------RVRALVTVASS 99 (245)
T ss_pred HHHHHHh-------C----CCCeEEEEEcHHHHHHHHHHHHCHH----------hhheeeEecCC
Confidence 3333321 1 2589999999999988877764322 26777776664
No 44
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.32 E-value=0.00035 Score=75.49 Aligned_cols=133 Identities=19% Similarity=0.250 Sum_probs=80.5
Q ss_pred CCeeEEEEEEecCC-CCCC-CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCC-CCccccceEEeeCC
Q 015858 58 HGRNLFYYFVESEG-NPSK-DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPY-SWTKVSSIIYLDSP 134 (399)
Q Consensus 58 ~~~~lfy~f~~s~~-~p~~-~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~-sW~~~anllfiD~P 134 (399)
.|..+..|++.-.. ++.+ -|+|++++||| ++..+. .+. .+.. =+.+-+.|++++-.
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~~-------~~~------------~~~q~~~~~G~~V~~~n~R 432 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVGY-------SFN------------PEIQVLASAGYAVLAPNYR 432 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--cccccc-------ccc------------hhhHHHhcCCeEEEEeCCC
Confidence 57789999887653 4433 49999999999 434330 111 1111 12345778888843
Q ss_pred Ccccccc--ccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeee
Q 015858 135 AGVGLSY--SENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFK 212 (399)
Q Consensus 135 vG~GfSy--~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLk 212 (399)
--+||+. ..... -..+. ...+|+.+++. |+.+.|......+.|+|.||||...-.++ .+. . .+|
T Consensus 433 GS~GyG~~F~~~~~-~~~g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~----~~~------~-~f~ 498 (620)
T COG1506 433 GSTGYGREFADAIR-GDWGG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA----TKT------P-RFK 498 (620)
T ss_pred CCCccHHHHHHhhh-hccCC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH----hcC------c-hhh
Confidence 2334432 22111 01111 24567888888 88999988778899999999997643333 221 1 367
Q ss_pred eeeecCCccCccc
Q 015858 213 GYLVGNGVTDEEI 225 (399)
Q Consensus 213 Gi~igNg~~d~~~ 225 (399)
..+...|.++...
T Consensus 499 a~~~~~~~~~~~~ 511 (620)
T COG1506 499 AAVAVAGGVDWLL 511 (620)
T ss_pred eEEeccCcchhhh
Confidence 7777777666543
No 45
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.24 E-value=0.0014 Score=65.30 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=51.3
Q ss_pred cccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhccc
Q 015858 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (399)
Q Consensus 124 ~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 203 (399)
+...++.+|.| |-|-|.. .. .+....|+|+.++|... .. .+.+.|+|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~~---~~--~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~---- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSLD---VP--IDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPA---- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCCC---CC--CCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChH----
Confidence 45789999998 7765521 12 24456677787777541 11 1346799999999988888875433
Q ss_pred CCCCeeeeeeeeecCCcc
Q 015858 204 GEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 204 ~~~~~inLkGi~igNg~~ 221 (399)
.++++++.++..
T Consensus 162 ------~V~~LvLi~s~~ 173 (343)
T PRK08775 162 ------RVRTLVVVSGAH 173 (343)
T ss_pred ------hhheEEEECccc
Confidence 277888887753
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=97.23 E-value=0.0018 Score=68.24 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=66.6
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
+..+.|+-+. +.+.|.||.++|.++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAP----------------LL-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHH----------------Hh-------hcceEEEEecCC-CCC
Confidence 6678776432 2347999999999888766543311 11 123679999988 999
Q ss_pred cccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHH
Q 015858 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (399)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 193 (399)
.|...... ...+..+.++|+..+++.. .+ ..+++|+|+|+||..+-.+
T Consensus 64 ~S~~~~~~-~~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 64 RSSAPKRT-AAYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCCCCCcc-cccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHHHH
Confidence 99643221 1245677888888888752 11 2479999999999554333
No 47
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.20 E-value=0.0012 Score=64.08 Aligned_cols=128 Identities=11% Similarity=0.044 Sum_probs=74.9
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~ 137 (399)
..++|.|+++... ...+|+||+++|-.+-..-. -.+.... ..|.. .-.+++-+|.| |.
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~~~~la-------------~~La~------~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRMVALQA-------------RAFAA------GGFGVLQIDLY-GC 67 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHHHHHHH-------------HHHHH------CCCEEEEECCC-CC
Confidence 4567888776543 23369999999853311000 0110000 01111 23679999998 99
Q ss_pred ccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeec
Q 015858 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (399)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~ig 217 (399)
|.|-.... + .+.....+|+..++ +|++... ..+++|+|+|.||..+..+|.+.. -.++++++-
T Consensus 68 G~S~g~~~-~--~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL~ 130 (266)
T TIGR03101 68 GDSAGDFA-A--ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPLA----------AKCNRLVLW 130 (266)
T ss_pred CCCCCccc-c--CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCc----------cccceEEEe
Confidence 99854221 1 23334455555443 3444432 368999999999999887775421 236788888
Q ss_pred CCccCcc
Q 015858 218 NGVTDEE 224 (399)
Q Consensus 218 Ng~~d~~ 224 (399)
+|.++..
T Consensus 131 ~P~~~g~ 137 (266)
T TIGR03101 131 QPVVSGK 137 (266)
T ss_pred ccccchH
Confidence 8887654
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.04 E-value=0.0061 Score=60.04 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=91.0
Q ss_pred cceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc
Q 015858 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (399)
Q Consensus 45 ~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (399)
.....|+.... .+..++|+.+++..++. .+|++++|.=..+.-+-.+.+ .+..+-
T Consensus 7 ~~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la~----------------~l~~~G----- 61 (298)
T COG2267 7 RTRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELAD----------------DLAARG----- 61 (298)
T ss_pred cccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHHH----------------HHHhCC-----
Confidence 34445555544 47899999888765444 899999998655544322210 122222
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
+.++=+|.| |-|-|.. ...+...+-.+...|+..|++..-+.+| ..|+||+|+|.||-.+...+..-.
T Consensus 62 -~~V~~~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~------ 129 (298)
T COG2267 62 -FDVYALDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP------ 129 (298)
T ss_pred -CEEEEecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC------
Confidence 458889999 9999962 1223333334455566666665544444 579999999999998766665432
Q ss_pred CCCeeeeeeeeecCCccCcc
Q 015858 205 EKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~ 224 (399)
-.++|+++-+|++...
T Consensus 130 ----~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 ----PRIDGLVLSSPALGLG 145 (298)
T ss_pred ----ccccEEEEECccccCC
Confidence 3589999999998776
No 49
>PRK10566 esterase; Provisional
Probab=97.04 E-value=0.0033 Score=59.00 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=61.6
Q ss_pred EEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccc
Q 015858 63 FYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYS 142 (399)
Q Consensus 63 fy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~ 142 (399)
+|.++++.......|+||+++|++|....+..+. ..+.. +-.+++.+|.| |.|-|+.
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~----------------~~l~~------~G~~v~~~d~~-g~G~~~~ 70 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFA----------------VALAQ------AGFRVIMPDAP-MHGARFS 70 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHH----------------HHHHh------CCCEEEEecCC-cccccCC
Confidence 3333343222345799999999988765432210 01111 12568899987 7776653
Q ss_pred cCCCCCc---cCh-HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 143 ENKTDYV---TGD-LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 143 ~~~~~~~---~~~-~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
....... +.+ ....+++..++ .|+.+.+.....+++|+|+|+||..+-.++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 71 GDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred CccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 2111000 111 12344454444 44445544455789999999999998776653
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.02 E-value=0.0034 Score=74.94 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=70.7
Q ss_pred CCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCC-----C
Q 015858 72 NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----T 146 (399)
Q Consensus 72 ~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~-----~ 146 (399)
+.++.|.||++||.+|.+..+..+.+ .| .+..+++.+|.| |.|.|..... .
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCccccccccc
Confidence 34467899999999999887633311 11 123689999988 9998854221 0
Q ss_pred CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 147 DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 147 ~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
....+.+..++++..+++. +...+++|+|+|+||..+-.+|.+..+ .++++++.++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECCC
Confidence 1123455666666666653 223689999999999988887765332 26677766653
No 51
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.00 E-value=0.0057 Score=54.76 Aligned_cols=104 Identities=21% Similarity=0.213 Sum_probs=62.6
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
.|.+++++|+|+++..+....+. +..... + .+++.+|+| |.|.|- .. .......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~----------------~~~~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV----------------LPALAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH----------------hhcccc---c-eEEEEeccc-CCCCCC-cc----cccHHHH
Confidence 67999999999998776431010 001111 1 789999999 999996 11 0111112
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
+.++..++ +... ..+++++|+|+||..+-.++.+..+ .++++++.++...
T Consensus 75 ~~~~~~~~----~~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALL----DALG---LEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHH----HHhC---CCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 44444444 3332 2349999999998777666665433 3566666665544
No 52
>PRK07581 hypothetical protein; Validated
Probab=96.98 E-value=0.0038 Score=61.79 Aligned_cols=128 Identities=18% Similarity=0.106 Sum_probs=69.7
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
+.+++|.-... ..+...|+||..+|++|.+..+......|| .+. .+...+|-+|.| |.|
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~~~~~~~~~-------------~l~------~~~~~vi~~D~~-G~G 83 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDNEWLIGPGR-------------ALD------PEKYFIIIPNMF-GNG 83 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCcccchhhccCCC-------------ccC------cCceEEEEecCC-CCC
Confidence 56777654332 133456888887766655544321111111 111 134779999999 999
Q ss_pred cccccCCC--CCccC---hHHHHHHHHHHHHHHHHHCcCCCCCC-EEEEeecccccchHHHHHHHHHhcccCCCCeeeee
Q 015858 139 LSYSENKT--DYVTG---DLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFK 212 (399)
Q Consensus 139 fSy~~~~~--~~~~~---~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLk 212 (399)
.|-..... .+... ....++++........+. +.-.+ ..|+|+|+||..+-.+|.+-.+. ++
T Consensus 84 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~----------V~ 150 (339)
T PRK07581 84 LSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM----------VE 150 (339)
T ss_pred CCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH----------Hh
Confidence 98532211 12111 122344444322222222 22346 57899999999999998865543 56
Q ss_pred eeeecCCc
Q 015858 213 GYLVGNGV 220 (399)
Q Consensus 213 Gi~igNg~ 220 (399)
++++.++.
T Consensus 151 ~Lvli~~~ 158 (339)
T PRK07581 151 RAAPIAGT 158 (339)
T ss_pred hheeeecC
Confidence 66666544
No 53
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.97 E-value=0.0036 Score=57.94 Aligned_cols=115 Identities=16% Similarity=0.094 Sum_probs=58.7
Q ss_pred CCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCc---
Q 015858 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYV--- 149 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~--- 149 (399)
....|+|++|+|+++..+....- .+ +. .+..+ .-+.+|..|.| |.|.+.. .-++.
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~--~~---~~---------~~a~~-----~g~~Vv~Pd~~-g~~~~~~--~~~~~~~~ 67 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVID--WG---WK---------AAADR-----YGFVLVAPEQT-SYNSSNN--CWDWFFTH 67 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhh--cC---hH---------HHHHh-----CCeEEEecCCc-CccccCC--CCCCCCcc
Confidence 45689999999999876543210 00 00 00000 12456677765 4432211 00000
Q ss_pred --cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 150 --TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 150 --~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
........++.+++....++++ ....+++|+|+|.||..+-.++.. +. -.+.++++..|.
T Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~---~p-------~~~~~~~~~~g~ 129 (212)
T TIGR01840 68 HRARGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT---YP-------DVFAGGASNAGL 129 (212)
T ss_pred ccCCCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh---Cc-------hhheEEEeecCC
Confidence 0001123344455544444443 334689999999999976666543 11 125676666665
No 54
>PLN02511 hydrolase
Probab=96.92 E-value=0.0052 Score=62.65 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=71.1
Q ss_pred eEEEEEEecCCCCeeEEEEEEec--CCCCCCCCeEEEECCCCCchhh-h-hhhhhcCCceeeCCCCCCCCCcccccCCCC
Q 015858 47 HYSGYVTVDESHGRNLFYYFVES--EGNPSKDPVVLWLNGGPGCSSF-D-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSW 122 (399)
Q Consensus 47 ~~sGyl~v~~~~~~~lfy~f~~s--~~~p~~~PlvlWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW 122 (399)
...-++... +|..+.+..+.. ...+.++|+||.++|..|+|.- + -.+.. .+ .
T Consensus 71 ~~re~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~----------------~~------~ 126 (388)
T PLN02511 71 YRRECLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL----------------RA------R 126 (388)
T ss_pred eeEEEEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH----------------HH------H
Confidence 344566665 355565533321 2235678999999999998742 1 11100 00 1
Q ss_pred ccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 123 ~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
.+-.+++-+|.| |.|-|-......+. ...++|+.++++..-.++| ..+++++|+|.||..+-.++.
T Consensus 127 ~~g~~vv~~d~r-G~G~s~~~~~~~~~---~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 127 SKGWRVVVFNSR-GCADSPVTTPQFYS---ASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred HCCCEEEEEecC-CCCCCCCCCcCEEc---CCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 123579999988 88888532221111 2334566667766556666 468999999999988655553
No 55
>PRK10985 putative hydrolase; Provisional
Probab=96.82 E-value=0.0094 Score=58.96 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=58.6
Q ss_pred EEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhh-hh-hhhhcCCceeeCCCCCCCCCcccccCCCCccccc
Q 015858 50 GYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF-DG-FIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (399)
Q Consensus 50 Gyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~-~g-~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (399)
-.++.. +|..+.+++.+....+.++|+||.++|.+|++.. .. .+. ..+... -.+
T Consensus 34 ~~~~~~--dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~----------------~~l~~~------G~~ 89 (324)
T PRK10985 34 QRLELP--DGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL----------------EAAQKR------GWL 89 (324)
T ss_pred eEEECC--CCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH----------------HHHHHC------CCE
Confidence 335554 3455544433322334568999999999987532 11 010 011111 134
Q ss_pred eEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 128 llfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
++-+|.+ |.|-|-......+..+.. +|+..+++...++++ ..+++++|+|+||..+-..+.
T Consensus 90 v~~~d~r-G~g~~~~~~~~~~~~~~~---~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~ 150 (324)
T PRK10985 90 GVVMHFR-GCSGEPNRLHRIYHSGET---EDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLA 150 (324)
T ss_pred EEEEeCC-CCCCCccCCcceECCCch---HHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHH
Confidence 6667766 665332111111212222 344444332223444 468999999999987655444
No 56
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.82 E-value=0.015 Score=56.92 Aligned_cols=129 Identities=20% Similarity=0.184 Sum_probs=85.3
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~ 137 (399)
.|..+|.-......+++-+-+|+.++|.=+-||.. |.+.- ..|..+.+ -+.-+|++ |.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~--~~~~a-------------~~l~~~g~------~v~a~D~~-Gh 93 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR--YQSTA-------------KRLAKSGF------AVYAIDYE-GH 93 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhh--HHHHH-------------HHHHhCCC------eEEEeecc-CC
Confidence 47788875554444456778999999865554321 11100 12222222 26779987 99
Q ss_pred ccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeec
Q 015858 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (399)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~ig 217 (399)
|.|-+ ...+..+-+..+.|+..|+..+.. ..+++..|.|++|||.||..+-.++.+ + +--..|+++.
T Consensus 94 G~SdG--l~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k---~-------p~~w~G~ilv 160 (313)
T KOG1455|consen 94 GRSDG--LHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK---D-------PNFWDGAILV 160 (313)
T ss_pred CcCCC--CcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh---C-------Ccccccceee
Confidence 99964 335667778888888888877554 457888999999999999876666554 1 1126777777
Q ss_pred CCcc
Q 015858 218 NGVT 221 (399)
Q Consensus 218 Ng~~ 221 (399)
.|..
T Consensus 161 aPmc 164 (313)
T KOG1455|consen 161 APMC 164 (313)
T ss_pred eccc
Confidence 7764
No 57
>PLN02442 S-formylglutathione hydrolase
Probab=96.79 E-value=0.013 Score=57.11 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+++...+..++.. ....+++|+|+|+||+-+-.+|.+-. =.+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNP----------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCc----------hhEEEEEEECCccCcc
Confidence 34455556655543 33467999999999987665554311 1278888889987754
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.77 E-value=0.002 Score=58.60 Aligned_cols=75 Identities=19% Similarity=0.124 Sum_probs=51.3
Q ss_pred cceEEeeCCCccccccc---cCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcc
Q 015858 126 SSIIYLDSPAGVGLSYS---ENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (399)
Q Consensus 126 anllfiD~PvG~GfSy~---~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~ 202 (399)
++++-+|+| |.|+|.. ... ..-...++.+.+..++++.+. .+++++|+||||..+-.+|..-.+
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~---~~~~~vG~S~Gg~~~~~~a~~~p~--- 67 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPDF------PDYTTDDLAADLEALREALGI---KKINLVGHSMGGMLALEYAAQYPE--- 67 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSGS------CTHCHHHHHHHHHHHHHHHTT---SSEEEEEETHHHHHHHHHHHHSGG---
T ss_pred CEEEEEeCC-CCCCCCCCccCCc------ccccHHHHHHHHHHHHHHhCC---CCeEEEEECCChHHHHHHHHHCch---
Confidence 368899988 9999974 121 222344555566666665553 469999999999988777765332
Q ss_pred cCCCCeeeeeeeeecCCc
Q 015858 203 AGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 203 ~~~~~~inLkGi~igNg~ 220 (399)
.++++++.++.
T Consensus 68 -------~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 -------RVKKLVLISPP 78 (230)
T ss_dssp -------GEEEEEEESES
T ss_pred -------hhcCcEEEeee
Confidence 48888887775
No 59
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.75 E-value=0.016 Score=56.60 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=78.8
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccc-----eEEeeC
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS-----IIYLDS 133 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an-----llfiD~ 133 (399)
+...-||++.-..-++..|||+.|+|+=|.....-++ ..|++.|+ |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~------------------------sg~d~lAd~~gFlV~yPdg 99 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHG------------------------TGWDALADREGFLVAYPDG 99 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcc------------------------cchhhhhcccCcEEECcCc
Confidence 5667788887777788889999999987765543222 13333332 344331
Q ss_pred ------CCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCC
Q 015858 134 ------PAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (399)
Q Consensus 134 ------PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~ 207 (399)
|-+.|-++.... - ..+...+..+.+.+.....+|- .....+||+|-|-||..+-.|+-.-.+
T Consensus 100 ~~~~wn~~~~~~~~~p~~--~-~~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~-------- 167 (312)
T COG3509 100 YDRAWNANGCGNWFGPAD--R-RRGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPD-------- 167 (312)
T ss_pred cccccCCCcccccCCccc--c-cCCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCcc--------
Confidence 223333332111 0 1222333344444444445553 334589999999999987777654221
Q ss_pred eeeeeeeeecCCcc-Ccc-cccccchhhhhccCCCCH
Q 015858 208 VLNFKGYLVGNGVT-DEE-IDGNALVPFVHGMGLISD 242 (399)
Q Consensus 208 ~inLkGi~igNg~~-d~~-~~~~~~~~~~~~~gli~~ 242 (399)
-+.++++..|.. +.. .....-.+.+..||..|.
T Consensus 168 --~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 168 --IFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred --cccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 155666666554 221 222233445555555443
No 60
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.60 E-value=0.016 Score=58.00 Aligned_cols=144 Identities=17% Similarity=0.160 Sum_probs=85.5
Q ss_pred EEEEEecCCCCeeEEEEEEecCC-CC-CCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCc-cc
Q 015858 49 SGYVTVDESHGRNLFYYFVESEG-NP-SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-KV 125 (399)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~~s~~-~p-~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~-~~ 125 (399)
+.-+.+. ....++-+.|.... .+ +.+|+++|++||=-|-+.. . .....+--++. +.
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~------------------~-~~~y~~~~~~~a~~ 121 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA------------------N-SPAYDSFCTRLAAE 121 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC------------------C-CchhHHHHHHHHHH
Confidence 3444444 45678888887654 34 6899999999996554320 0 00000111121 34
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHH-HHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLK-WFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
+|.+-|= |+|--+.. ..+...-++.-..+..++.. |+..+-.++ .++|+|.|-||-.+-.+|+++.+..
T Consensus 122 ~~~vvvS----VdYRLAPE-h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--- 191 (336)
T KOG1515|consen 122 LNCVVVS----VDYRLAPE-HPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--- 191 (336)
T ss_pred cCeEEEe----cCcccCCC-CCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---
Confidence 4454432 34433321 12332223333334455555 877766554 4999999999999999999998753
Q ss_pred CCCeeeeeeeeecCCccCcc
Q 015858 205 EKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~ 224 (399)
...+.|+|.++.-|++.-.
T Consensus 192 -~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 192 -LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred -CCCcceEEEEEEecccCCC
Confidence 1256799999998886544
No 61
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.49 E-value=0.021 Score=56.46 Aligned_cols=138 Identities=21% Similarity=0.203 Sum_probs=90.8
Q ss_pred cceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc
Q 015858 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (399)
Q Consensus 45 ~~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (399)
.....+|++++ + +++++.+. .++..|++|.|+|=|=.+=.+=+ . ...|.. +
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~---------q-------~~~la~------~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRH---------Q-------IPGLAS------R 70 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhh---------h-------hhhhhh------c
Confidence 45677888887 3 77777775 78899999999998865533200 0 011111 1
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
...++.+|.+ |-|+|-..... ...+....+.|+..+|.. +...+++++||+||+..+=.+|..-.+..+.
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~- 140 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG- 140 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce-
Confidence 1678999998 99999654331 224667777887777753 2246899999999999988888876655321
Q ss_pred CCCeeeeeeeeecCCccCccc
Q 015858 205 EKPVLNFKGYLVGNGVTDEEI 225 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~~ 225 (399)
.+++++.-. ||..++..
T Consensus 141 ---lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 141 ---LVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred ---EEEecCCCC-Ccccchhh
Confidence 344444444 55555544
No 62
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.48 E-value=0.003 Score=61.46 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=51.3
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
..|++.+|-+.+..-.|.. ...+....++++..+|+...+.. .....+++|+|+|.||+.+-.+|.++.+
T Consensus 66 ~~nVi~vD~~~~~~~~y~~----a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----- 135 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQ----AVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----- 135 (275)
T ss_pred CCEEEEEECccccccChHH----HHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----
Confidence 4889999977431111110 11234455667777776655542 2234689999999999999888876532
Q ss_pred CCCeeeeeeeeecCCc
Q 015858 205 EKPVLNFKGYLVGNGV 220 (399)
Q Consensus 205 ~~~~inLkGi~igNg~ 220 (399)
.++.|+..+|.
T Consensus 136 -----~v~~iv~LDPa 146 (275)
T cd00707 136 -----KLGRITGLDPA 146 (275)
T ss_pred -----ccceeEEecCC
Confidence 36677776654
No 63
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.35 E-value=0.036 Score=56.21 Aligned_cols=137 Identities=15% Similarity=0.030 Sum_probs=74.0
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhh--hhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFI--YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAG 136 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f--~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG 136 (399)
+.+++|.-+-. .++...|.||.++|-+|.+..+... .+.+|=.+. ..+.....--.+...||-+|.|=+
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~--------~~~~~~~~l~~~~~~vi~~Dl~G~ 102 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWD--------NMVGPGKPIDTDRYFVICSNVLGG 102 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhhcccccccCCCCcchh--------hccCCCCccCccceEEEeccCCCC
Confidence 56788875431 1234479999999999988653211 000000000 000000000023468999998832
Q ss_pred cccccccCC------CCC-----ccChHHHHHHHHHHHHHHHHHCcCCCCCC-EEEEeecccccchHHHHHHHHHhcccC
Q 015858 137 VGLSYSENK------TDY-----VTGDLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 137 ~GfSy~~~~------~~~-----~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
.|.|-.... ..+ ..+....++++.++++. . .-.+ .+|+|+|+||..+-.+|.+-.+
T Consensus 103 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~----- 170 (379)
T PRK00175 103 CKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA----L---GITRLAAVVGGSMGGMQALEWAIDYPD----- 170 (379)
T ss_pred CCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH----h---CCCCceEEEEECHHHHHHHHHHHhChH-----
Confidence 354532110 000 23455556666666643 2 2245 5899999999888888876433
Q ss_pred CCCeeeeeeeeecCCcc
Q 015858 205 EKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~ 221 (399)
.++++++.|+..
T Consensus 171 -----~v~~lvl~~~~~ 182 (379)
T PRK00175 171 -----RVRSALVIASSA 182 (379)
T ss_pred -----hhhEEEEECCCc
Confidence 378888887643
No 64
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.27 E-value=0.023 Score=54.91 Aligned_cols=79 Identities=20% Similarity=0.124 Sum_probs=53.8
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
.+++-+|.| |.|-|-... .+.....+|+..+++.+.+..|.+ .++.++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC----
Confidence 679999998 999885321 233345667777777655555543 46999999999976544432 11
Q ss_pred CCeeeeeeeeecCCccCc
Q 015858 206 KPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 206 ~~~inLkGi~igNg~~d~ 223 (399)
-.++|+++.||++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 148999999998653
No 65
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.21 E-value=0.015 Score=60.24 Aligned_cols=80 Identities=10% Similarity=0.007 Sum_probs=51.8
Q ss_pred ccceEEeeCCCccccc-cccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhccc
Q 015858 125 VSSIIYLDSPAGVGLS-YSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (399)
Q Consensus 125 ~anllfiD~PvG~GfS-y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~ 203 (399)
..|++-+|.| |-|-| |.. ...+....|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.++.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~~----a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p----- 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT----SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK----- 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc----ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC-----
Confidence 3799999998 44533 221 11234567777887776544333 244568999999999998888776431
Q ss_pred CCCCeeeeeeeeecCCc
Q 015858 204 GEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 204 ~~~~~inLkGi~igNg~ 220 (399)
-.+..|++.+|.
T Consensus 142 -----~rV~rItgLDPA 153 (442)
T TIGR03230 142 -----HKVNRITGLDPA 153 (442)
T ss_pred -----cceeEEEEEcCC
Confidence 125666666664
No 66
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.16 E-value=0.014 Score=58.14 Aligned_cols=95 Identities=20% Similarity=0.134 Sum_probs=61.8
Q ss_pred ccceEEeeCCCccccccccCC-CCCccChHHHHHHHHHHHHHHHHHC----------------cCCC-CCCEEEEeeccc
Q 015858 125 VSSIIYLDSPAGVGLSYSENK-TDYVTGDLKTASDTHTFLLKWFELY----------------PEFL-ANPFFIAGESYA 186 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~-~~~~~~~~~~a~d~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYg 186 (399)
-.+++-+|.| |.|.|-.... ..+..+-++.++|+..+++...+.. .++. +.|+||+|+|.|
T Consensus 74 G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 74 GYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 4789999987 9999865322 1222355677788888887654310 0232 579999999999
Q ss_pred ccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 187 GIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 187 G~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
|..+-.++....+.... .....++|+++.+|.+.
T Consensus 153 g~i~~~~~~~~~~~~~~--~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 153 GNIALRLLELLGKSNEN--NDKLNIKGCISLSGMIS 186 (332)
T ss_pred cHHHHHHHHHhcccccc--ccccccceEEEeccceE
Confidence 99887777654322100 01235889887787764
No 67
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.11 E-value=0.013 Score=56.83 Aligned_cols=107 Identities=22% Similarity=0.338 Sum_probs=72.3
Q ss_pred CCCCeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccCh
Q 015858 74 SKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (399)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~ 152 (399)
..-|+++.++|| |.|.+. ..|.- .|..+- .--++-+|-. |.|-+-..+..+ .+-
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~----------------el~s~~-----~~r~~a~DlR-gHGeTk~~~e~d--lS~ 126 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS----------------ELKSKI-----RCRCLALDLR-GHGETKVENEDD--LSL 126 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH----------------HHHhhc-----ceeEEEeecc-ccCccccCChhh--cCH
Confidence 356999999998 888775 55510 111111 1124778965 999887766554 467
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecC
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igN 218 (399)
+..++|+...+++||..-| .+++|+|||.||-.+.+.|..=. .-+|-|+.+.+
T Consensus 127 eT~~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~---------lpsl~Gl~viD 179 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT---------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh---------chhhhceEEEE
Confidence 7889999999998885544 47999999999998866654211 12367777654
No 68
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.01 E-value=0.022 Score=60.78 Aligned_cols=131 Identities=18% Similarity=0.092 Sum_probs=77.5
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcc
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~ 137 (399)
+|..|+..++... +....|+||.++|-...+.... +.. . .....+.. +-..++-+|.+ |.
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~-----~~~-~------~~~~~l~~------~Gy~vv~~D~R-G~ 64 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRW-----GLD-K------TEPAWFVA------QGYAVVIQDTR-GR 64 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcc-----ccc-c------ccHHHHHh------CCcEEEEEecc-cc
Confidence 4677887655433 2346799999996533221100 000 0 00001111 23679999977 99
Q ss_pred ccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeec
Q 015858 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (399)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~ig 217 (399)
|.|-+... . .+ ...++|+.++++ |+.+.|. .+.++.++|+||||..+-.+|.. . .-.||+++..
T Consensus 65 g~S~g~~~--~-~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEFD--L-LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQ 128 (550)
T ss_pred ccCCCceE--e-cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeec
Confidence 99964321 1 12 346677777665 6766663 34689999999999765555432 1 1248999988
Q ss_pred CCccCcc
Q 015858 218 NGVTDEE 224 (399)
Q Consensus 218 Ng~~d~~ 224 (399)
++..|..
T Consensus 129 ~~~~d~~ 135 (550)
T TIGR00976 129 EGVWDLY 135 (550)
T ss_pred Ccccchh
Confidence 8887654
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.31 E-value=0.012 Score=54.16 Aligned_cols=92 Identities=15% Similarity=0.045 Sum_probs=57.7
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
=..++.+|.+-+.||+..-........-....+|+.++++...++ +......+.|+|.||||+.+-.++.+ .
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~iD~~ri~i~G~S~GG~~a~~~~~~---~---- 85 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQ-YYIDPDRIGIMGHSYGGYLALLAATQ---H---- 85 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHT-TSEEEEEEEEEEETHHHHHHHHHHHH---T----
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcc-ccccceeEEEEcccccccccchhhcc---c----
Confidence 367899998877777653211111122235566777777554444 45555789999999999987776652 1
Q ss_pred CCCeeeeeeeeecCCccCccccc
Q 015858 205 EKPVLNFKGYLVGNGVTDEEIDG 227 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~~~~ 227 (399)
.-.++.++.++|.+|.....
T Consensus 86 ---~~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTCSB
T ss_pred ---ceeeeeeeccceecchhccc
Confidence 12378899999998876543
No 70
>PRK10162 acetyl esterase; Provisional
Probab=95.27 E-value=0.063 Score=53.13 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
+.+.++++.+..+++. ....+++|+|+|.||+.+-.++..+.+... ....++++++..|+++.
T Consensus 135 ~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 3344444544333332 223589999999999999999887755421 12347888888898874
No 71
>PRK10115 protease 2; Provisional
Probab=95.14 E-value=0.042 Score=60.31 Aligned_cols=138 Identities=13% Similarity=0.029 Sum_probs=72.6
Q ss_pred CCCeeEEEEEEecCC--CCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCC
Q 015858 57 SHGRNLFYYFVESEG--NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSP 134 (399)
Q Consensus 57 ~~~~~lfy~f~~s~~--~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~P 134 (399)
.+|..+-.|++-... .....|++|+.+||||.+...++..+. .+|.+.-=++.+=.+
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~---------------------~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR---------------------LSLLDRGFVYAIVHV 482 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHH---------------------HHHHHCCcEEEEEEc
Confidence 356777765554221 234569999999999998543322111 122222222222223
Q ss_pred C-ccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeee
Q 015858 135 A-GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKG 213 (399)
Q Consensus 135 v-G~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkG 213 (399)
- |+||...=...+....-....+|+.+..+ |+...+--....+.|.|-||||.-+-.++. +. .=.+++
T Consensus 483 RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~----~~------Pdlf~A 551 (686)
T PRK10115 483 RGGGELGQQWYEDGKFLKKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAIN----QR------PELFHG 551 (686)
T ss_pred CCCCccCHHHHHhhhhhcCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHHh----cC------hhheeE
Confidence 3 33443210000000011123455555554 333444334468999999999985543332 21 113899
Q ss_pred eeecCCccCcccc
Q 015858 214 YLVGNGVTDEEID 226 (399)
Q Consensus 214 i~igNg~~d~~~~ 226 (399)
++.+.|++|....
T Consensus 552 ~v~~vp~~D~~~~ 564 (686)
T PRK10115 552 VIAQVPFVDVVTT 564 (686)
T ss_pred EEecCCchhHhhh
Confidence 9999999998643
No 72
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.12 E-value=0.1 Score=48.15 Aligned_cols=101 Identities=17% Similarity=0.171 Sum_probs=67.7
Q ss_pred eEEEECCCCCchhhhhhh-hhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHH
Q 015858 78 VVLWLNGGPGCSSFDGFI-YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTA 156 (399)
Q Consensus 78 lvlWlnGGPG~SS~~g~f-~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a 156 (399)
-|+++.+|=|.++.+--+ ..+++ . ..++..|+.| |-+ .......+.++.|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~------------------~-----~~~v~~i~~~-~~~-----~~~~~~~si~~la 52 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD------------------D-----VIGVYGIEYP-GRG-----DDEPPPDSIEELA 52 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT------------------T-----EEEEEEECST-TSC-----TTSHEESSHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC------------------C-----eEEEEEEecC-CCC-----CCCCCCCCHHHHH
Confidence 478888887877665322 11111 0 3568888877 555 1112235677788
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
+...+.|+ +..|+ .|++|+|.|+||..+=.+|.++.++. ...+.+++.++.
T Consensus 53 ~~y~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 53 SRYAEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred HHHHHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 77666665 35553 39999999999999999999998863 346778877754
No 73
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.11 E-value=0.011 Score=60.37 Aligned_cols=80 Identities=20% Similarity=0.174 Sum_probs=51.7
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
.+||=+|-| |||+|.... +. +....++..+..|+...|+.....+-++|-|.||.|++.+|..=.
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~------- 283 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED------- 283 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-------
T ss_pred CEEEEEccC-CCcccccCC---CC----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc-------
Confidence 469999999 999984211 11 112335666777888899988889999999999999999986311
Q ss_pred CCeeeeeeeeecCCccCc
Q 015858 206 KPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 206 ~~~inLkGi~igNg~~d~ 223 (399)
-.|||++.-.|.++.
T Consensus 284 ---~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 284 ---PRLKAVVALGAPVHH 298 (411)
T ss_dssp ---TT-SEEEEES---SC
T ss_pred ---cceeeEeeeCchHhh
Confidence 127887666565443
No 74
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.97 E-value=0.047 Score=46.19 Aligned_cols=95 Identities=21% Similarity=0.201 Sum_probs=57.8
Q ss_pred eEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHH
Q 015858 78 VVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTAS 157 (399)
Q Consensus 78 lvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~ 157 (399)
+||+++|+.|....+..+.+ .+... -.+++.+|.| |.|.+.. ...++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----------------~l~~~------G~~v~~~~~~-~~~~~~~----------~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----------------ALAEQ------GYAVVAFDYP-GHGDSDG----------ADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----------------HHHHT------TEEEEEESCT-TSTTSHH----------SHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----------------HHHHC------CCEEEEEecC-CCCccch----------hHHHH
Confidence 68999999887665433322 11111 2567888877 6665511 11233
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
++++.+. ..++ ..++++++|+|.||..+..++.+- -.+++++..+|+.
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYP 95 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESS
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCcc
Confidence 3333332 3333 357999999999999887777632 2378888888853
No 75
>PLN00021 chlorophyllase
Probab=94.92 E-value=0.21 Score=49.63 Aligned_cols=116 Identities=19% Similarity=0.116 Sum_probs=64.6
Q ss_pred CCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccCh
Q 015858 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~ 152 (399)
..+.|+|+|++|+.+....+..+.+ .|. +| -..++.+|.+ | ++... . ..+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~----------------~La----s~--G~~VvapD~~-g--~~~~~----~-~~~ 98 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQ----------------HIA----SH--GFIVVAPQLY-T--LAGPD----G-TDE 98 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHH----------------HHH----hC--CCEEEEecCC-C--cCCCC----c-hhh
Confidence 4567999999999776544322211 111 11 1346666755 3 22111 1 122
Q ss_pred HHHHHHHHHHHHHHHHH----CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 153 LKTASDTHTFLLKWFEL----YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~----fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
.+.+.++.+++.+-++. ..+....+++|+|+|.||..+-.+|.+..+.. ....+++++..+++...
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 23455555555543332 11233357999999999998888876543321 12457888888886543
No 76
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=94.80 E-value=0.27 Score=49.10 Aligned_cols=128 Identities=14% Similarity=0.108 Sum_probs=70.9
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhh--------hhhhh-cCCceeeCCCCCCCCCcccccCCCCccccce
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD--------GFIYE-HGPFNFEAPTTKGSLPKLHVNPYSWTKVSSI 128 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~--------g~f~e-~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 128 (399)
.+.+++|.-+... +....|.||.++|=.|.+-.. |.+.. +|| ...--.+...|
T Consensus 14 ~~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~-----------------~~~l~~~~~~v 75 (351)
T TIGR01392 14 SDVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGP-----------------GRAIDTDRYFV 75 (351)
T ss_pred CCceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCC-----------------CCCcCCCceEE
Confidence 3578888754321 123458999999887765331 01100 011 00001234689
Q ss_pred EEeeCCCc--cccccccC--CCC--C-----ccChHHHHHHHHHHHHHHHHHCcCCCCCC-EEEEeecccccchHHHHHH
Q 015858 129 IYLDSPAG--VGLSYSEN--KTD--Y-----VTGDLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 129 lfiD~PvG--~GfSy~~~--~~~--~-----~~~~~~~a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvp~la~~ 196 (399)
+-+|.| | .|-|-..+ ..+ + ..+..+.++++..+++. . .-.+ ++|+|+|+||..+-.+|.+
T Consensus 76 i~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l---~~~~~~~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 76 VCSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L---GIEQIAAVVGGSMGGMQALEWAID 147 (351)
T ss_pred EEecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHH
Confidence 999988 7 45442111 001 1 13445555666555543 2 2235 9999999999888777765
Q ss_pred HHHhcccCCCCeeeeeeeeecCCcc
Q 015858 197 VMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 197 i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
-.+ .++++++.++..
T Consensus 148 ~p~----------~v~~lvl~~~~~ 162 (351)
T TIGR01392 148 YPE----------RVRAIVVLATSA 162 (351)
T ss_pred ChH----------hhheEEEEccCC
Confidence 322 277788877653
No 77
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.57 E-value=0.23 Score=48.05 Aligned_cols=118 Identities=12% Similarity=0.121 Sum_probs=73.9
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCC-----CCCcc
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----TDYVT 150 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~-----~~~~~ 150 (399)
+++++|+-|-||.-..+--|.+ .|..+- +....|+=+. -.|++..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------------~L~~~l---~~~~~i~~is---h~Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------------ALYEKL---NPQFEILGIS---HAGHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------------HHHHhC---CCCCeeEEec---CCCCcCCcccccccCCCCcc
Confidence 5899999999999988755422 111110 2344555555 2455544332 22336
Q ss_pred ChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
+.+++.+.-.+||+++....+ ..+.+++|.|||-|+..+-.+.+++. ....++++++.-=|.+..
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccc
Confidence 788899999999999888764 23578999999998766544444443 113456666555555433
No 78
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.14 E-value=0.15 Score=56.65 Aligned_cols=137 Identities=20% Similarity=0.175 Sum_probs=76.9
Q ss_pred CeeEEEEEEecCC-CC-CCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc-ccceEEeeCCC
Q 015858 59 GRNLFYYFVESEG-NP-SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPA 135 (399)
Q Consensus 59 ~~~lfy~f~~s~~-~p-~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiD~Pv 135 (399)
|...++++....+ ++ +.-||+++..|||++-+..+. ..+..|.+.+.. -+=++.|| +.
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~------------------~~~~~~~~~~s~~g~~v~~vd-~R 567 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK------------------FSVDWNEVVVSSRGFAVLQVD-GR 567 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee------------------EEecHHHHhhccCCeEEEEEc-CC
Confidence 4566666665443 33 356999999999994333211 122233333333 24467788 66
Q ss_pred ccccccccCCCCC--ccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeee
Q 015858 136 GVGLSYSENKTDY--VTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKG 213 (399)
Q Consensus 136 G~GfSy~~~~~~~--~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkG 213 (399)
|+|+.=..-.... ..++. ..+|.....+.+.+.+ ..-...+.|+|-||||.. +..++.... .--+|.
T Consensus 568 Gs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~-----~~~fkc 636 (755)
T KOG2100|consen 568 GSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP-----GDVFKC 636 (755)
T ss_pred CcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc-----CceEEE
Confidence 8886521100000 02222 2355566666666555 333457999999999975 344443321 133676
Q ss_pred eeecCCccCccc
Q 015858 214 YLVGNGVTDEEI 225 (399)
Q Consensus 214 i~igNg~~d~~~ 225 (399)
-+..+|.+|...
T Consensus 637 gvavaPVtd~~~ 648 (755)
T KOG2100|consen 637 GVAVAPVTDWLY 648 (755)
T ss_pred EEEecceeeeee
Confidence 677799998763
No 79
>PLN02872 triacylglycerol lipase
Probab=94.06 E-value=0.19 Score=51.51 Aligned_cols=126 Identities=16% Similarity=0.040 Sum_probs=73.2
Q ss_pred CCcceEEEEEEecCCCCeeEEEEEEecCC---CCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccC
Q 015858 43 LPSKHYSGYVTVDESHGRNLFYYFVESEG---NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNP 119 (399)
Q Consensus 43 ~~~~~~sGyl~v~~~~~~~lfy~f~~s~~---~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~ 119 (399)
.++..+.-+|+.. +|-.|-.+-+.... .+..+|+||.++|..++|..+..- +|-.- -...|...
T Consensus 40 ~gy~~e~h~v~T~--DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~---~~~~s-------la~~La~~- 106 (395)
T PLN02872 40 AGYSCTEHTIQTK--DGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLN---SPEQS-------LGFILADH- 106 (395)
T ss_pred cCCCceEEEEECC--CCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeec---Ccccc-------hHHHHHhC-
Confidence 3566777778775 34444444333221 234579999999998888775321 22000 00011111
Q ss_pred CCCccccceEEeeCCCccccccccC-----CCCC-ccChHHHH-HHHHHHHHHHHHHCcCCCCCCEEEEeecccccchH
Q 015858 120 YSWTKVSSIIYLDSPAGVGLSYSEN-----KTDY-VTGDLKTA-SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVP 191 (399)
Q Consensus 120 ~sW~~~anllfiD~PvG~GfSy~~~-----~~~~-~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp 191 (399)
-.++.-.|.+ |.|+|+... ...+ ..+..+.| .|+-++++...+.. ..+++++|+|.||..+-
T Consensus 107 -----GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 107 -----GFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred -----CCCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 1357777876 888886422 1111 24555666 67888887665432 35899999999996553
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.04 E-value=0.5 Score=48.42 Aligned_cols=109 Identities=20% Similarity=0.252 Sum_probs=70.1
Q ss_pred CCCCCeEEEECCCCCchhhh------hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCC
Q 015858 73 PSKDPVVLWLNGGPGCSSFD------GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKT 146 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~------g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~ 146 (399)
..++|+++.+.|=.|.|.-. ...++.| |+ .+-+- +-|-|-|--+++.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r-------------------------~VVfN-~RG~~g~~LtTpr 174 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR-------------------------VVVFN-HRGLGGSKLTTPR 174 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE-------------------------EEEEC-CCCCCCCccCCCc
Confidence 46789999999999988542 2223344 22 22233 4587777665554
Q ss_pred CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 147 DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 147 ~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
-|..+..+.-+.+.++++ ++||+ .++|.+|.|+||..+ .+++-+..++. --..|++|-|||-
T Consensus 175 ~f~ag~t~Dl~~~v~~i~---~~~P~---a~l~avG~S~Gg~iL---~nYLGE~g~~~----~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 175 LFTAGWTEDLREVVNHIK---KRYPQ---APLFAVGFSMGGNIL---TNYLGEEGDNT----PLIAAVAVCNPWD 236 (409)
T ss_pred eeecCCHHHHHHHHHHHH---HhCCC---CceEEEEecchHHHH---HHHhhhccCCC----CceeEEEEeccch
Confidence 455555554444455554 58885 799999999999864 66665543322 2267889999983
No 81
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.86 E-value=0.29 Score=51.05 Aligned_cols=38 Identities=18% Similarity=0.104 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHH
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 194 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (399)
....++++++-.+.|. -..+++.|+|||+||+-+-.++
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 3445667777666664 2346899999999998654444
No 82
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.68 E-value=0.24 Score=46.76 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=30.8
Q ss_pred HHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 168 ELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 168 ~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
........+.+|++|.|-||...-.|+....+ -|.++++.+|.
T Consensus 89 ~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~ 131 (220)
T PF10503_consen 89 AARYNIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGV 131 (220)
T ss_pred hhhcccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeeccc
Confidence 33334556789999999999888777765333 26778877776
No 83
>PRK11460 putative hydrolase; Provisional
Probab=93.44 E-value=0.41 Score=45.12 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
.+.++++.+.++. .....+++|+|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444554444333 334568999999999998876654
No 84
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.28 E-value=0.24 Score=51.04 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=56.4
Q ss_pred cceEEeeCCCccccccccCC---CCCc-cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhc
Q 015858 126 SSIIYLDSPAGVGLSYSENK---TDYV-TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~---~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 201 (399)
|-||++|.. =-|-|..... .... -+.+|+-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.
T Consensus 60 a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP--- 135 (434)
T PF05577_consen 60 ALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP--- 135 (434)
T ss_dssp EEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T---
T ss_pred CcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC---
Confidence 668888876 5666653211 1111 4667888999999999887876666779999999999987655544332
Q ss_pred ccCCCCeeeeeeeeecCCccCcccccccch
Q 015858 202 DAGEKPVLNFKGYLVGNGVTDEEIDGNALV 231 (399)
Q Consensus 202 ~~~~~~~inLkGi~igNg~~d~~~~~~~~~ 231 (399)
.+ +.|.+--++-+....++..+.
T Consensus 136 ------~~-~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 136 ------HL-FDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp ------TT--SEEEEET--CCHCCTTTHHH
T ss_pred ------Ce-eEEEEeccceeeeecccHHHH
Confidence 22 456666666666555554333
No 85
>PRK11071 esterase YqiA; Provisional
Probab=93.17 E-value=0.32 Score=44.49 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=25.0
Q ss_pred HHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
.+++.++.+... .++++|+|.|.||.++-.+|.+
T Consensus 48 ~~~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 48 AELLESLVLEHG---GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHH
Confidence 445555555443 3689999999999998888865
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.03 E-value=0.86 Score=43.02 Aligned_cols=130 Identities=15% Similarity=0.200 Sum_probs=80.6
Q ss_pred EEecCCCCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEe
Q 015858 52 VTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYL 131 (399)
Q Consensus 52 l~v~~~~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfi 131 (399)
+++...+...|.=|.+.+++ ++|.+|.|+|--|- | |++ ... . ..... +=.-|++-+
T Consensus 57 i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGN--m-Ghr------~~i-----~---~~fy~----~l~mnv~iv 112 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGN--M-GHR------LPI-----A---RVFYV----NLKMNVLIV 112 (300)
T ss_pred EEEEcCcceeEeeeeecccC---CCceEEEEccCCCc--c-cch------hhH-----H---HHHHH----HcCceEEEE
Confidence 44443334566655554443 78999999986553 1 221 111 0 00000 124688999
Q ss_pred eCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeee
Q 015858 132 DSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNF 211 (399)
Q Consensus 132 D~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inL 211 (399)
+-. |.|-|-+...+ .+...+|+...+. +-.+|...+++++++|.|-||..+-.+|.+-.+ .+
T Consensus 113 sYR-GYG~S~GspsE---~GL~lDs~avldy----l~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri 174 (300)
T KOG4391|consen 113 SYR-GYGKSEGSPSE---EGLKLDSEAVLDY----LMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RI 174 (300)
T ss_pred Eee-ccccCCCCccc---cceeccHHHHHHH----HhcCccCCcceEEEEecccCCeeEEEeeccchh----------he
Confidence 976 99999764322 2222333333333 356888888999999999999998888876443 37
Q ss_pred eeeeecCCccCc
Q 015858 212 KGYLVGNGVTDE 223 (399)
Q Consensus 212 kGi~igNg~~d~ 223 (399)
.++++-|-+++-
T Consensus 175 ~~~ivENTF~SI 186 (300)
T KOG4391|consen 175 SAIIVENTFLSI 186 (300)
T ss_pred eeeeeechhccc
Confidence 888998887764
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=92.98 E-value=0.61 Score=43.58 Aligned_cols=79 Identities=18% Similarity=0.092 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccc---cc
Q 015858 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID---GN 228 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~---~~ 228 (399)
....++.+.+||....+++.- ..+++++.|-|-|+.++-.+..... -.++|+++-.|..-+..+ ..
T Consensus 76 l~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~~----------~~~~~ail~~g~~~~~~~~~~~~ 144 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTLP----------GLFAGAILFSGMLPLEPELLPDL 144 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhCc----------hhhccchhcCCcCCCCCcccccc
Confidence 344566688889888887753 3579999999999998766655322 247788888877544421 23
Q ss_pred cchhhhhccCCCC
Q 015858 229 ALVPFVHGMGLIS 241 (399)
Q Consensus 229 ~~~~~~~~~gli~ 241 (399)
...+.+..||--|
T Consensus 145 ~~~pill~hG~~D 157 (207)
T COG0400 145 AGTPILLSHGTED 157 (207)
T ss_pred CCCeEEEeccCcC
Confidence 3455666666433
No 88
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=92.49 E-value=0.94 Score=44.30 Aligned_cols=45 Identities=16% Similarity=0.053 Sum_probs=36.5
Q ss_pred CCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccc
Q 015858 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (399)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~ 225 (399)
.+++.|+|+|-||+-+..++....+.. ....++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 468999999999999999999887652 234677788889988765
No 89
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.37 E-value=0.48 Score=47.29 Aligned_cols=66 Identities=21% Similarity=0.308 Sum_probs=43.1
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
--++=||-| |-|+|-..+. +..=++.+....++.|+..+ ...+++|+|+||||..+-.+|....+.
T Consensus 87 ~~v~aiDl~-G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~~---~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYSSPLPR-----GPLYTLRELVELIRRFVKEV---FVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred eEEEEEecC-CCCcCCCCCC-----CCceehhHHHHHHHHHHHhh---cCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 447889988 8774322111 11134455556666666543 346899999999999998888876554
No 90
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.01 E-value=2.5 Score=41.79 Aligned_cols=119 Identities=21% Similarity=0.250 Sum_probs=62.6
Q ss_pred CCCeeEEEEEEecC-CCCCC--CCeEEEECCC-CCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEe
Q 015858 57 SHGRNLFYYFVESE-GNPSK--DPVVLWLNGG-PGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYL 131 (399)
Q Consensus 57 ~~~~~lfy~f~~s~-~~p~~--~PlvlWlnGG-PG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfi 131 (399)
..+.+|-|-+|.-. -+|.+ -||||||+|+ -|.+-.. -+.+..|-.... .--+=.||
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa-------------------~pedqcfV 229 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWA-------------------GPEDQCFV 229 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeee-------------------cccCceEE
Confidence 35778889877653 34443 3999999985 3443333 223333433322 10111444
Q ss_pred eCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 132 DSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 132 D~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
=.|- |..--.+.......--....+.+.+-+..++.--.+.+|+.|-|-||.-.=+++.+..+
T Consensus 230 lAPQ-----y~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 230 LAPQ-----YNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred Eccc-----ccccccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 4452 22111111011111112234455545566777777899999999999876666655433
No 91
>PLN02454 triacylglycerol lipase
Probab=91.33 E-value=0.56 Score=48.26 Aligned_cols=69 Identities=12% Similarity=0.166 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
.....+++...|+...+++|.++ ..++|+|||.||-.+-..|..|.+.... ...+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 34566778999999999998764 3699999999999999988888765311 123457778888887653
No 92
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=91.00 E-value=0.51 Score=52.52 Aligned_cols=84 Identities=15% Similarity=0.249 Sum_probs=55.0
Q ss_pred cccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHC--------------cCCCCCCEEEEeecccccc
Q 015858 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELY--------------PEFLANPFFIAGESYAGIY 189 (399)
Q Consensus 124 ~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f--------------p~~~~~~~yi~GESYgG~y 189 (399)
+=..+|++|.+ |+|-|-+.- .....+..+|..+.+. |+... ..+.+.++-++|.||||..
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~----~~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCP----TTGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcC----ccCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 35789999965 999986532 2223444556555553 66642 2234568999999999987
Q ss_pred hHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 190 VPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 190 vp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
.-.+|..- .-.||.|+-..|+.+.
T Consensus 352 ~~~aAa~~----------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 352 PNAVATTG----------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHhhC----------CCcceEEEeeCCCCcH
Confidence 76665421 1248999987777653
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=90.18 E-value=0.36 Score=46.44 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=55.4
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
..+|.+|.. |+|-|.+.-. ....+.++|.++.| +|+...| +.+-++-++|.||+|...-.+|..-
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~----~~~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFD----PMSPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-----TTSHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEECCc-ccccCCCccc----cCChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC--------
Confidence 458999955 9999976432 11555667777666 5777775 4445899999999999877777621
Q ss_pred CCeeeeeeeeecCCccCccc
Q 015858 206 KPVLNFKGYLVGNGVTDEEI 225 (399)
Q Consensus 206 ~~~inLkGi~igNg~~d~~~ 225 (399)
.-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 224999998888776544
No 94
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.32 E-value=0.7 Score=41.98 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=37.1
Q ss_pred CCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 173 FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 173 ~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
+...+++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 44568999999999999999998887753 1238999999998876
No 95
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.18 E-value=0.82 Score=38.79 Aligned_cols=62 Identities=21% Similarity=0.221 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
...+.+.+.|+++.+++| ...+.|+|||-||-.+..+|..+.++.... ..+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~---~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS---SSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS---TTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc---ccceeeeecCCccc
Confidence 344567777888888887 468999999999999999999998764321 34567777777665
No 96
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.79 E-value=0.9 Score=39.60 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
.++.+...+++...++| ..+++|+|+|.||..+-.+|..+.++
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34455555666565666 46899999999999999999888765
No 97
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=88.72 E-value=0.7 Score=42.73 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccc-----
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGN----- 228 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~----- 228 (399)
+.++.+.+++....+.. ...+++||.|-|-||..+-.++.+- .-.+.|++..+|++-...+..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~----------p~~~~gvv~lsG~~~~~~~~~~~~~~ 152 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY----------PEPLAGVVALSGYLPPESELEDRPEA 152 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT----------SSTSSEEEEES---TTGCCCHCCHCC
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc----------CcCcCEEEEeeccccccccccccccc
Confidence 34455566666555432 4457899999999998877666532 124889998888865433221
Q ss_pred -cchhhhhccCC
Q 015858 229 -ALVPFVHGMGL 239 (399)
Q Consensus 229 -~~~~~~~~~gl 239 (399)
...+.+..||-
T Consensus 153 ~~~~pi~~~hG~ 164 (216)
T PF02230_consen 153 LAKTPILIIHGD 164 (216)
T ss_dssp CCTS-EEEEEET
T ss_pred cCCCcEEEEecC
Confidence 12355666663
No 98
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=87.49 E-value=0.94 Score=42.97 Aligned_cols=67 Identities=9% Similarity=0.011 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
..+.++.+||+...+.. ...+++|.+||.|+..+-.....+....... ...-.|..+++.+|.+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~-~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERP-DVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccch-hhHhhhheEEEECCCCCHH
Confidence 34445555555444332 2478999999999998888777776654310 0123688889999888753
No 99
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=87.37 E-value=1.3 Score=41.27 Aligned_cols=60 Identities=18% Similarity=0.221 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
...++...+++..+++| +.+++++|||-||-.+-.+|..+.++. ...+++.+..|.|.+.
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 33445666666666766 468999999999999988888887653 1345778888887763
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=86.83 E-value=2.6 Score=46.92 Aligned_cols=46 Identities=13% Similarity=-0.029 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHHH------H---HCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 151 GDLKTASDTHTFLLKWF------E---LYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
+..+.+.|++......- + .+..+...++++.|||.||.....++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 55677777765554432 1 1233556799999999999998888853
No 101
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=86.48 E-value=1.8 Score=45.19 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
.+..+++.+.+++.++..+ .+++.|+|||.||.++-.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 4556788888888887765 479999999999987766554
No 102
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=86.29 E-value=5 Score=46.88 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
.|-++.++|+.|.+..+..+.+ .+ .+...++-+|.| |.|-+. ....+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~----------------~l-------~~~~~v~~~~~~-g~~~~~-----~~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSR----------------YL-------DPQWSIYGIQSP-RPDGPM-----QTATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHH----------------hc-------CCCCcEEEEECC-CCCCCC-----CCCCCHHHH
Confidence 3668899999888776543321 01 122557778887 665331 122466777
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
|++....++. ..+ ..++.++|+|+||..+-.+|.++.++
T Consensus 1119 a~~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1119 CEAHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred HHHHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHc
Confidence 7777777654 233 25899999999999999999888664
No 103
>PLN02571 triacylglycerol lipase
Probab=85.77 E-value=2.5 Score=43.62 Aligned_cols=69 Identities=9% Similarity=0.029 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhccc----CCCCeeeeeeeeecCCccC
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA----GEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~----~~~~~inLkGi~igNg~~d 222 (399)
..+.++++..|+.+.+++|... .+++|+|||.||-.+-..|..|....-. .....+.+..+..|.|-+.
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e~-~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDEE-ISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCccc-ccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 3455678888999888888653 4799999999999998888888653110 0112345667778887765
No 104
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.63 E-value=4.5 Score=41.73 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=25.3
Q ss_pred CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
....|+|.|+||.-+-.++.+-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc----------cccEEEEeccce
Confidence 468999999999887666654222 266777777754
No 105
>PRK13604 luxD acyl transferase; Provisional
Probab=84.47 E-value=5.4 Score=39.59 Aligned_cols=122 Identities=15% Similarity=0.115 Sum_probs=68.2
Q ss_pred CCeeEEEEEEecC-CCCCCCCeEEEECCCCCchhh-hhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCC
Q 015858 58 HGRNLFYYFVESE-GNPSKDPVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPA 135 (399)
Q Consensus 58 ~~~~lfy~f~~s~-~~p~~~PlvlWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~Pv 135 (399)
.|..|.=|+...+ .++...|+++..+| .|+... ...+. ..| +.+=.++|-.|.--
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A----------------~~L------a~~G~~vLrfD~rg 74 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA----------------EYL------SSNGFHVIRYDSLH 74 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH----------------HHH------HHCCCEEEEecCCC
Confidence 4677887777664 34566788888774 455421 11110 112 22336788889654
Q ss_pred ccccccccCCCCCccCh-HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeee
Q 015858 136 GVGLSYSENKTDYVTGD-LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGY 214 (399)
Q Consensus 136 G~GfSy~~~~~~~~~~~-~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi 214 (399)
|.|-|-+. ..+...+. ...+....+++ ++.. ..+++|.|+|.||..+...|. ..+++++
T Consensus 75 ~~GeS~G~-~~~~t~s~g~~Dl~aaid~l----k~~~---~~~I~LiG~SmGgava~~~A~------------~~~v~~l 134 (307)
T PRK13604 75 HVGLSSGT-IDEFTMSIGKNSLLTVVDWL----NTRG---INNLGLIAASLSARIAYEVIN------------EIDLSFL 134 (307)
T ss_pred CCCCCCCc-cccCcccccHHHHHHHHHHH----HhcC---CCceEEEEECHHHHHHHHHhc------------CCCCCEE
Confidence 56877332 11222111 22233334444 3332 257999999999988533332 1237888
Q ss_pred eecCCccC
Q 015858 215 LVGNGVTD 222 (399)
Q Consensus 215 ~igNg~~d 222 (399)
++..|..+
T Consensus 135 I~~sp~~~ 142 (307)
T PRK13604 135 ITAVGVVN 142 (307)
T ss_pred EEcCCccc
Confidence 99899877
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=83.89 E-value=1.1 Score=41.09 Aligned_cols=51 Identities=18% Similarity=0.126 Sum_probs=35.4
Q ss_pred HHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccccc
Q 015858 161 TFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDG 227 (399)
Q Consensus 161 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~ 227 (399)
+.+++..+..+ ...+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 47 ~~l~~~i~~~~---~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 47 AQLEQLIEELK---PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHhCC---CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 34444444433 34599999999999999888754 2555 5669999886543
No 107
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.31 E-value=2.1 Score=43.85 Aligned_cols=61 Identities=21% Similarity=0.267 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHCcCCCC-CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 154 KTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
-+|.|...+|..-...+|.... .|+.+.|.|||| |+..|+.+|. +-.+.||+=-+++.-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 3688899999888889999875 799999999987 5666666663 23466666666665553
No 108
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.14 E-value=1.7 Score=40.72 Aligned_cols=61 Identities=26% Similarity=0.341 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
-.|+.++.+.|++.+++ +|||+|+|||-|+..+-.|-++..+.+... .=-+..++||-+.+
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~~pl~---~rLVAAYliG~~v~ 137 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAGDPLR---KRLVAAYLIGYPVT 137 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcCchHH---hhhheeeecCcccc
Confidence 36778888888988875 789999999999998777766554443210 11145566665544
No 109
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=82.36 E-value=3.8 Score=42.14 Aligned_cols=64 Identities=20% Similarity=0.376 Sum_probs=37.0
Q ss_pred cceEEee-------CCCccccccccCC-CCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHH
Q 015858 126 SSIIYLD-------SPAGVGLSYSENK-TDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPT 192 (399)
Q Consensus 126 anllfiD-------~PvG~GfSy~~~~-~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~ 192 (399)
|-|||+| +|.|.- ||.+.. -+| -+.+|+-+|...+| .++++..-=+..|+..+|-||||+-+.-
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaAW 183 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAAW 183 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHHH
Confidence 5688888 566665 443211 122 23344444554444 4555543334579999999999965433
No 110
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.06 E-value=8.9 Score=37.07 Aligned_cols=89 Identities=18% Similarity=0.231 Sum_probs=59.2
Q ss_pred CeEEEECCCCCchhhh-hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHH
Q 015858 77 PVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (399)
Q Consensus 77 PlvlWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~ 155 (399)
|.+|+++++=|.-..+ .+-.+++|- .-++-++.| |.|.- . .-..+.++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------------~~v~~l~a~-g~~~~----~-~~~~~l~~~ 50 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------------LPVYGLQAP-GYGAG----E-QPFASLDDM 50 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------------ceeeccccC-ccccc----c-cccCCHHHH
Confidence 5789999876665443 333444442 225667777 44421 0 112456677
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 201 (399)
|+...+.|+ +..|+ -|.++.|.|+||..+=.+|.++..+.
T Consensus 51 a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 51 AAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCC
Confidence 766666665 47886 49999999999999999999998764
No 111
>PRK04940 hypothetical protein; Provisional
Probab=81.73 E-value=2.1 Score=39.18 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccccc
Q 015858 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDG 227 (399)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~ 227 (399)
.++.|+|-|-||.|+-.||.+- .++.|+| ||.+.|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aVLi-NPAv~P~~~L 98 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQVIF-NPNLFPEENM 98 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEEEE-CCCCChHHHH
Confidence 4789999999999999888752 3565554 9999996543
No 112
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=81.50 E-value=4 Score=39.30 Aligned_cols=79 Identities=14% Similarity=0.142 Sum_probs=54.3
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
..|++=.|-- |.|.|-++..+ .+..+..+..++.|++ ++. +..++.|+|.|-|..-.-.+|.+ .
T Consensus 88 n~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Lasr----~--- 151 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLASR----Y--- 151 (258)
T ss_pred cceEEEEecc-cccccCCCccc---ccchhhHHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhhc----C---
Confidence 3567888865 99999765432 3555566667877775 332 45799999999998753334332 1
Q ss_pred CCCeeeeeeeeecCCccCcc
Q 015858 205 EKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~~ 224 (399)
. +.|+++-+|+++-.
T Consensus 152 ---~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 152 ---P--LAAVVLHSPFTSGM 166 (258)
T ss_pred ---C--cceEEEeccchhhh
Confidence 2 89999999998754
No 113
>PLN02753 triacylglycerol lipase
Probab=80.71 E-value=4.8 Score=42.68 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHHHHHHHCcC--CCCCCEEEEeecccccchHHHHHHHHHhc--ccCCCCeeeeeeeeecCCccC
Q 015858 151 GDLKTASDTHTFLLKWFELYPE--FLANPFFIAGESYAGIYVPTLAYEVMKGI--DAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvp~la~~i~~~~--~~~~~~~inLkGi~igNg~~d 222 (399)
+...+.+++...|+...+++|. .....++|+|||.||-.+-..|..|.+.. .......+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 4456677889999999988864 23457999999999999999998887532 111112345666777777664
No 114
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=80.53 E-value=6.2 Score=37.31 Aligned_cols=86 Identities=13% Similarity=0.120 Sum_probs=55.8
Q ss_pred ceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCC
Q 015858 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (399)
Q Consensus 127 nllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 206 (399)
+...|+-|.+.+-=-+.....+..+..+-++.+.+.|+.+.. ..+++.|+|.|-|+..+-...+++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 455666676433211111112334556666778888876555 4689999999999999888888887753221
Q ss_pred CeeeeeeeeecCCc
Q 015858 207 PVLNFKGYLVGNGV 220 (399)
Q Consensus 207 ~~inLkGi~igNg~ 220 (399)
.=+++-+++||+.
T Consensus 77 -~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 -PDDLSFVLIGNPR 89 (225)
T ss_pred -cCceEEEEecCCC
Confidence 1357889999985
No 115
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=80.51 E-value=4.1 Score=40.97 Aligned_cols=60 Identities=15% Similarity=0.181 Sum_probs=39.4
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcC-CCCCCEEEEeecccccchHH
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPT 192 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvp~ 192 (399)
.+|++...-| |||+|.+... -++.++ -++.+.++++.+++ -+.+.+.+.|+|-||-....
T Consensus 171 ~aNvl~fNYp-GVg~S~G~~s------~~dLv~-~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 171 GANVLVFNYP-GVGSSTGPPS------RKDLVK-DYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred CCcEEEECCC-ccccCCCCCC------HHHHHH-HHHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 5899999988 9999965321 122222 23444455544443 34578999999999987654
No 116
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=80.24 E-value=12 Score=38.26 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=34.2
Q ss_pred cChHHHHHHHHHHHHHHHHHCcCCCCCCEE-EEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCC
Q 015858 150 TGDLKTASDTHTFLLKWFELYPEFLANPFF-IAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (399)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg 219 (399)
.+..+.++++..+|+. . .-.++. ++|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 141 ~t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG~ial~~a~~~P~~----------v~~lv~ia~ 194 (389)
T PRK06765 141 VTILDFVRVQKELIKS----L---GIARLHAVMGPSMGGMQAQEWAVHYPHM----------VERMIGVIG 194 (389)
T ss_pred CcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChHh----------hheEEEEec
Confidence 3455555555555543 2 234665 999999999988888765443 556666554
No 117
>PLN02719 triacylglycerol lipase
Probab=79.85 E-value=4.9 Score=42.49 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHCcCCC--CCCEEEEeecccccchHHHHHHHHHhcc--cCCCCeeeeeeeeecCCccC
Q 015858 152 DLKTASDTHTFLLKWFELYPEFL--ANPFFIAGESYAGIYVPTLAYEVMKGID--AGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvp~la~~i~~~~~--~~~~~~inLkGi~igNg~~d 222 (399)
.....+++...|++..+++|.+. ...++|+|||.||-.+-..|..|.+..- ......+.+.-+..|.|-+.
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 34556778889999888888642 3479999999999999999988876421 11111334556677777654
No 118
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=79.82 E-value=0.71 Score=46.27 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=46.6
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
..||+.||.-.+..-.|.. ...+...+++.+.+||+.....+ .+...+++|+|+|.|+|.+-.+++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5799999976555444421 12345567777778877766432 2334689999999999999998888866
No 119
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.66 E-value=4 Score=39.37 Aligned_cols=104 Identities=18% Similarity=0.340 Sum_probs=54.6
Q ss_pred CCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccc-cCCCCccccceEEeeCCCccccccccCCCCCccC
Q 015858 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHV-NPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTG 151 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~-n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~ 151 (399)
-+++|+++|+-|-||-+..+--| |=-... .+.. -| -|+ ..++=-.+.|.-+-=+-+.. ..-..+
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F---~~~L~~---------~l~~r~~-~wt-Ish~~H~~~P~sl~~~~s~~-~~eifs 90 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEF---ARHLHL---------NLIDRLP-VWT-ISHAGHALMPASLREDHSHT-NEEIFS 90 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHH---HHHHHH---------hcccccc-eeE-EeccccccCCcccccccccc-cccccc
Confidence 36889999999999988654333 221100 0000 01 121 12222233441111111111 011146
Q ss_pred hHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
.+++.++=.+|++++. |+ ++++||.|+|-|... ..+|+..
T Consensus 91 L~~QV~HKlaFik~~~---Pk--~~ki~iiGHSiGaYm----~Lqil~~ 130 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKEYV---PK--DRKIYIIGHSIGAYM----VLQILPS 130 (301)
T ss_pred hhhHHHHHHHHHHHhC---CC--CCEEEEEecchhHHH----HHHHhhh
Confidence 6677778888888755 43 679999999987654 4455544
No 120
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=78.97 E-value=4.2 Score=37.54 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=50.2
Q ss_pred cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
.+-+++|.|+.+.++.+.++.. .+.+.|+|-|+|.-.+|.+..++...-+. .++++++..+..
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~---~~~vvLiGYSFGADvlP~~~nrLp~~~r~------~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWG---RKRVVLIGYSFGADVLPFIYNRLPAALRA------RVAQVVLLSPST 107 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhC---CceEEEEeecCCchhHHHHHhhCCHHHHh------heeEEEEeccCC
Confidence 4567899999999999887654 68999999999999999999999766432 366777666653
No 121
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=77.91 E-value=16 Score=38.51 Aligned_cols=34 Identities=18% Similarity=0.104 Sum_probs=24.3
Q ss_pred HHHHHHHHHHCcCCCCCCEEEEeecccccchHHHH
Q 015858 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 194 (399)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (399)
++.+++..+.|.-=. ..+-|+|||-|++-+-.+-
T Consensus 165 LkWV~~NIe~FGGDp-~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 165 LKWVRDNIEAFGGDP-QNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHHHHHHHHhCCCc-cceEEeeccchHHHHHHhh
Confidence 566677777776432 4799999999988765543
No 122
>KOG3101 consensus Esterase D [General function prediction only]
Probab=77.67 E-value=11 Score=35.51 Aligned_cols=182 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred ceEEEEEEecC----CCCeeEEEE-EEecC-CCCCCCCeEEEECCCCCchh-------hh-hhhhhcCCceeeCCCCCCC
Q 015858 46 KHYSGYVTVDE----SHGRNLFYY-FVESE-GNPSKDPVVLWLNGGPGCSS-------FD-GFIYEHGPFNFEAPTTKGS 111 (399)
Q Consensus 46 ~~~sGyl~v~~----~~~~~lfy~-f~~s~-~~p~~~PlvlWlnGGPG~SS-------~~-g~f~e~GP~~~~~~~~~~~ 111 (399)
+.+-|+..+.. +.+..|=|- |++.. .+...-|+++||.|= -|.- .+ -.-.+.|=-.|.++... .
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSP-R 85 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSP-R 85 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCC-C
Confidence 44555555532 123345443 33321 223346999999963 3421 11 11234555555533221 1
Q ss_pred CCcccccCCCCccccceEEeeCCCccccccccCCCCCccCh---HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeeccccc
Q 015858 112 LPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD---LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (399)
Q Consensus 112 ~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~---~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 188 (399)
+-.+.-.+.|| |=-.|.||=-..+.+.+...- +-+.+.+.+.|.. .+-.....+.=|+|+|+|||
T Consensus 86 G~~v~g~~esw---------DFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~---~~~pld~~k~~IfGHSMGGh 153 (283)
T KOG3101|consen 86 GVEVAGDDESW---------DFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNS---ANVPLDPLKVGIFGHSMGGH 153 (283)
T ss_pred ccccCCCcccc---------cccCCceeEEecccchHhhhhhHHHHHHHHHHHHhcc---ccccccchhcceeccccCCC
Confidence 22344455677 545677774322222221110 1122223333221 11112224588999999999
Q ss_pred chHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccccchhhhhccCCCCHHHHHHHHHHh
Q 015858 189 YVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLC 252 (399)
Q Consensus 189 yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C 252 (399)
=+-.++.+ | .-..|.+---.|..+|..--.+.-.|.-+.|- +..+++.....|
T Consensus 154 GAl~~~Lk----n------~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDat~ 206 (283)
T KOG3101|consen 154 GALTIYLK----N------PSKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDATH 206 (283)
T ss_pred ceEEEEEc----C------cccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcchHH
Confidence 65433321 1 11345555555666665443333334444443 555666554444
No 123
>PF03283 PAE: Pectinacetylesterase
Probab=77.02 E-value=19 Score=36.57 Aligned_cols=153 Identities=18% Similarity=0.105 Sum_probs=78.0
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhh----hhhcCCceeeCCCCCCC---CCcccccCCCCccccceEEe
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGF----IYEHGPFNFEAPTTKGS---LPKLHVNPYSWTKVSSIIYL 131 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~----f~e~GP~~~~~~~~~~~---~~~l~~n~~sW~~~anllfi 131 (399)
|..-.|++-+.. ....+-+||+|.||=-|.+..-- .+++|--..-....... ...-..||.-+ ..|+|||
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV 110 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE
Confidence 455555554442 34467899999999899875422 23444332111100011 01223566322 2678888
Q ss_pred eCCCccccccccCCCCCccCh---HHHHHHHHHHHHHHH-HH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCC
Q 015858 132 DSPAGVGLSYSENKTDYVTGD---LKTASDTHTFLLKWF-EL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (399)
Q Consensus 132 D~PvG~GfSy~~~~~~~~~~~---~~~a~d~~~fL~~f~-~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~ 206 (399)
=-= +|-++.-+......+. --....+++.+.+++ .. +++ ..++.|+|.|-||.=+..-+.++.+.-..
T Consensus 111 pYC--~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--- 183 (361)
T PF03283_consen 111 PYC--DGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--- 183 (361)
T ss_pred Eec--CCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---
Confidence 543 3434322111111111 112233444444444 44 443 35799999999999888888888775421
Q ss_pred CeeeeeeeeecCCccC
Q 015858 207 PVLNFKGYLVGNGVTD 222 (399)
Q Consensus 207 ~~inLkGi~igNg~~d 222 (399)
...++++.-..-++|
T Consensus 184 -~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 -SVKVKCLSDSGFFLD 198 (361)
T ss_pred -CceEEEecccccccc
Confidence 345665554333333
No 124
>PLN02324 triacylglycerol lipase
Probab=76.20 E-value=8.3 Score=39.82 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhccc-----CCCCeeeeeeeeecCCccC
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA-----GEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~-----~~~~~inLkGi~igNg~~d 222 (399)
...-+++..-|++.++++|... ..++|+|||.||-.+-..|..|.+.... .....+++.-+..|.|-+.
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVG 266 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIG 266 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcC
Confidence 4555668888888888888532 4699999999999998888888764210 0112344555566666554
No 125
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=75.74 E-value=13 Score=32.73 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=41.3
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
...++.+|.| |.|.+-. ...+.+..++.....+. ...+ ..++.++|+|+||..+-.+|..+.++
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 3568888876 6664421 11233444444444443 2333 36899999999999999999888764
No 126
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=73.96 E-value=52 Score=33.10 Aligned_cols=120 Identities=20% Similarity=0.258 Sum_probs=65.8
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchh--hh-hh---hhhcCCceeeCCCCCCCCCcccccCCCCccccceEEee
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSS--FD-GF---IYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLD 132 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS--~~-g~---f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD 132 (399)
|--.+.|... ......|+++-++|==|.|. .. |+ +.+-| ..++-.+
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg--------------------------~~~Vv~~ 111 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG--------------------------WLVVVFH 111 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC--------------------------CeEEEEe
Confidence 4455666432 12345699999999666552 22 22 22222 2345555
Q ss_pred CCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeee
Q 015858 133 SPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFK 212 (399)
Q Consensus 133 ~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLk 212 (399)
-- |-|.+-.....-|..++. +|+..|+..-.+++| .+++|.+|-|.||.. ||..+.+..+. ...-.
T Consensus 112 ~R-gcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgnm---La~ylgeeg~d----~~~~a 177 (345)
T COG0429 112 FR-GCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGNM---LANYLGEEGDD----LPLDA 177 (345)
T ss_pred cc-cccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHHH---HHHHHHhhccC----cccce
Confidence 33 555443222222334444 344444444344677 489999999999963 57777665322 12356
Q ss_pred eeeecCCc
Q 015858 213 GYLVGNGV 220 (399)
Q Consensus 213 Gi~igNg~ 220 (399)
++++-+|+
T Consensus 178 a~~vs~P~ 185 (345)
T COG0429 178 AVAVSAPF 185 (345)
T ss_pred eeeeeCHH
Confidence 67776665
No 127
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=73.86 E-value=7.3 Score=38.74 Aligned_cols=78 Identities=8% Similarity=-0.139 Sum_probs=45.4
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHH-HHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTA-SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~ 204 (399)
.+++-+|.. |-|.|-. . .+..+.+ .++.++++...++.+ ..+++++|+|+||..+-.++..-.
T Consensus 95 ~~V~~~D~~-g~g~s~~----~--~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~------ 158 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR----Y--LTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYP------ 158 (350)
T ss_pred CeEEEEeCC-CCCHHHh----c--CCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCc------
Confidence 467777854 5554421 1 1222222 335555555555554 468999999999987665554211
Q ss_pred CCCeeeeeeeeecCCccCc
Q 015858 205 EKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 205 ~~~~inLkGi~igNg~~d~ 223 (399)
-.++++++.++.++.
T Consensus 159 ----~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 159 ----DKIKNLVTMVTPVDF 173 (350)
T ss_pred ----hheeeEEEecccccc
Confidence 126777777776664
No 128
>PLN02761 lipase class 3 family protein
Probab=73.26 E-value=10 Score=40.25 Aligned_cols=70 Identities=9% Similarity=0.041 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHCcCC-C--CCCEEEEeecccccchHHHHHHHHHhccc---CCCCeeeeeeeeecCCccC
Q 015858 153 LKTASDTHTFLLKWFELYPEF-L--ANPFFIAGESYAGIYVPTLAYEVMKGIDA---GEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvp~la~~i~~~~~~---~~~~~inLkGi~igNg~~d 222 (399)
....+++...|+...+.+|.. + ...++|+|||.||-.+-..|..|...+-. .....+++.-+..|.|-+.
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 455677888899988888532 1 23599999999999998888888753211 0122345666677777654
No 129
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=73.11 E-value=2.4 Score=39.74 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=51.1
Q ss_pred ccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeee
Q 015858 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (399)
Q Consensus 136 G~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~ 215 (399)
-+||-+++.. ...+++..++.++++--|+.+|.-+ .+-+.|||-|.|-+..+..++-+ -.+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHHH
Confidence 4566555432 3567888888888887788887543 58999999999987777666422 2367888
Q ss_pred ecCCccCc
Q 015858 216 VGNGVTDE 223 (399)
Q Consensus 216 igNg~~d~ 223 (399)
+-.|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 88887543
No 130
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=72.89 E-value=11 Score=34.99 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhc
Q 015858 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~ 201 (399)
+.+..++.+.+.|.+..+..+.- .+++-++|+|.||.++=.+...+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 44556777888887777766543 368999999999999876666665543
No 131
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=72.52 E-value=17 Score=34.09 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHC--cCCCCCCEEEEeecccccc
Q 015858 154 KTASDTHTFLLKWFELY--PEFLANPFFIAGESYAGIY 189 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~y 189 (399)
+.++.+.+.++..++.+ ..-..+++.|+|||.||..
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv 98 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV 98 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH
Confidence 44555666666665554 1223578999999999974
No 132
>COG0627 Predicted esterase [General function prediction only]
Probab=71.59 E-value=9.2 Score=38.10 Aligned_cols=131 Identities=23% Similarity=0.187 Sum_probs=65.5
Q ss_pred CCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCccccc-CCCCccccceEEeeCCCcccccc-ccCCCCCccCh
Q 015858 75 KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVN-PYSWTKVSSIIYLDSPAGVGLSY-SENKTDYVTGD 152 (399)
Q Consensus 75 ~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n-~~sW~~~anllfiD~PvG~GfSy-~~~~~~~~~~~ 152 (399)
++.-|+|+.+|..|.. -.+.+.++++-..+ ..+-.++-+ -.-+....++--|+ |+|.|.|+ .+..... ...
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~---~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~-~~~ 124 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQAD---ESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPP-WAS 124 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhh---hcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCc-ccc
Confidence 4444556666788874 23344444433211 000111111 12244444555555 79999995 3222111 111
Q ss_pred HHHHHHHHHHH-----HHHHHHCcCCCC-CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFL-----LKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL-----~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
. ..+.+.|| ..|.+.||.-.. ..-.|+|+|.||+=+-.+|.+-.++ ++.+.=-+|+++|.
T Consensus 125 ~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 125 G--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred C--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 1 12333333 245556663321 3688999999999887777654322 44455555666654
No 133
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=70.28 E-value=29 Score=34.20 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=62.8
Q ss_pred CCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccc--eEEeeCCCccccccccCCCCCcc
Q 015858 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS--IIYLDSPAGVGLSYSENKTDYVT 150 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an--llfiD~PvG~GfSy~~~~~~~~~ 150 (399)
.+....|+=++|-||+=-= |+.- -++.+.++ ++=|.-| |.||+-... +...
T Consensus 32 gs~~gTVv~~hGsPGSH~D---------FkYi---------------~~~l~~~~iR~I~iN~P-Gf~~t~~~~--~~~~ 84 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHND---------FKYI---------------RPPLDEAGIRFIGINYP-GFGFTPGYP--DQQY 84 (297)
T ss_pred CCCceeEEEecCCCCCccc---------hhhh---------------hhHHHHcCeEEEEeCCC-CCCCCCCCc--cccc
Confidence 3445689999999998411 1000 01222333 4556678 888874322 2223
Q ss_pred ChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
+..+. ..|..+++++- ..+ ..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 85 ~n~er----~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 85 TNEER----QNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred ChHHH----HHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 33333 34666666654 233 5788899999999888777643 36799999986
No 134
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=70.10 E-value=26 Score=27.28 Aligned_cols=78 Identities=22% Similarity=0.212 Sum_probs=47.5
Q ss_pred eeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCcccc
Q 015858 60 RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGL 139 (399)
Q Consensus 60 ~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~Gf 139 (399)
..||+..+..+. + .+.+|+.++|--..|.- +.++.. .|..+- ..++-+|+. |-|.
T Consensus 2 ~~L~~~~w~p~~-~-~k~~v~i~HG~~eh~~r---y~~~a~-------------~L~~~G------~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPEN-P-PKAVVVIVHGFGEHSGR---YAHLAE-------------FLAEQG------YAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCC-C-CCEEEEEeCCcHHHHHH---HHHHHH-------------HHHhCC------CEEEEECCC-cCCC
Confidence 467776555432 2 68999999987444433 333222 222222 458889987 9999
Q ss_pred ccccCCCCCccChHHHHHHHHHHHH
Q 015858 140 SYSENKTDYVTGDLKTASDTHTFLL 164 (399)
Q Consensus 140 Sy~~~~~~~~~~~~~~a~d~~~fL~ 164 (399)
|-+. ..+..+-++..+|+..|++
T Consensus 57 S~g~--rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEGK--RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCc--ccccCCHHHHHHHHHHHhC
Confidence 9642 2344566677777777763
No 135
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=69.55 E-value=7.2 Score=36.83 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
...+++++..+.++. +++|+|||=||..+-..|..+.+.
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 446677777777763 699999999999988888875543
No 136
>PRK14566 triosephosphate isomerase; Provisional
Probab=68.14 E-value=12 Score=36.15 Aligned_cols=61 Identities=21% Similarity=0.381 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.|+++..||++++.+........+=|. |||-.-|.-+..|.+.. ++.|++||...+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 46788999999999975422212233444 99999999999998753 489999999888763
No 137
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=67.28 E-value=12 Score=35.96 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=40.9
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHH-HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKT-ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~-a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
+.+|-.|-- |+|=|.....+...+.-.+- -.|+-..|..--+.-| ..|.|.+||||||+-.-.+++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 567888865 99988765444333332222 2344444433223344 479999999999998766654
No 138
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=66.63 E-value=22 Score=38.72 Aligned_cols=117 Identities=25% Similarity=0.378 Sum_probs=62.3
Q ss_pred CCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcccc----------ceEEeeCCCcc---cccc
Q 015858 75 KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS----------SIIYLDSPAGV---GLSY 141 (399)
Q Consensus 75 ~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a----------nllfiD~PvG~---GfSy 141 (399)
.-|+++.+-||||. +|+.|.+.|.+.. =|++||.. |+ |.-+
T Consensus 641 kYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlkF 694 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLKF 694 (867)
T ss_pred CCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Cccccchhh
Confidence 47999999999976 3445666665532 25889954 43 1111
Q ss_pred ccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCC-CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 142 SENKTDYVTGDLKTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 142 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
...- ....+..+ ++|=.+-|+-.-++.. |.. ..+-|-|-||||... ...+.+- |.| ++-.+-|.|.
T Consensus 695 E~~i-k~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLS----lm~L~~~-----P~I-frvAIAGapV 761 (867)
T KOG2281|consen 695 ESHI-KKKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLS----LMGLAQY-----PNI-FRVAIAGAPV 761 (867)
T ss_pred HHHH-hhccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHH----HHHhhcC-----cce-eeEEeccCcc
Confidence 1000 00112111 1222333332223332 332 468999999999643 3333221 223 6777889999
Q ss_pred cCcccccccc
Q 015858 221 TDEEIDGNAL 230 (399)
Q Consensus 221 ~d~~~~~~~~ 230 (399)
++...-..+|
T Consensus 762 T~W~~YDTgY 771 (867)
T KOG2281|consen 762 TDWRLYDTGY 771 (867)
T ss_pred eeeeeecccc
Confidence 8876443333
No 139
>PLN00413 triacylglycerol lipase
Probab=65.83 E-value=11 Score=39.48 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
++.+.|++.++++|. .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 466777888888884 579999999999998888876654
No 140
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=64.50 E-value=31 Score=34.29 Aligned_cols=141 Identities=13% Similarity=0.034 Sum_probs=68.1
Q ss_pred CCeeEEEEEEecCCCCCCCCeEEEECCCCCchhhh---hhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCC
Q 015858 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD---GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSP 134 (399)
Q Consensus 58 ~~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~---g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~P 134 (399)
.|..++=|++.-.......|.||.++|..|.+... ..+...|=..+..+....++ ....... ...+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~--~~~d~~~---------~~~~ 133 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGG--RSPDYRG---------SSGG 133 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSS--SS-B-SS---------BSSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCC--CCCCccc---------cCCC
Confidence 46677766665543456789999999988875443 23445554444322111110 0000100 0112
Q ss_pred CccccccccC---CCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeee
Q 015858 135 AGVGLSYSEN---KTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNF 211 (399)
Q Consensus 135 vG~GfSy~~~---~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inL 211 (399)
..-|+-.... .+.+. -.....|.+..+ .|+...|+.....+.++|+|-||...-.+|. +.+ .+
T Consensus 134 ~~~g~~~~g~~~~~e~~y--yr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~----------rv 199 (320)
T PF05448_consen 134 TLKGHITRGIDDNPEDYY--YRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP----------RV 199 (320)
T ss_dssp -SSSSTTTTTTS-TTT-H--HHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS----------T-
T ss_pred CCccHHhcCccCchHHHH--HHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc----------cc
Confidence 2223221100 00000 012233444444 4566789998889999999999988666655 322 26
Q ss_pred eeeeecCCccCc
Q 015858 212 KGYLVGNGVTDE 223 (399)
Q Consensus 212 kGi~igNg~~d~ 223 (399)
++++...|++..
T Consensus 200 ~~~~~~vP~l~d 211 (320)
T PF05448_consen 200 KAAAADVPFLCD 211 (320)
T ss_dssp SEEEEESESSSS
T ss_pred cEEEecCCCccc
Confidence 777777776543
No 141
>PLN02802 triacylglycerol lipase
Probab=63.39 E-value=15 Score=38.81 Aligned_cols=64 Identities=13% Similarity=0.068 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
...+++..-++++++++|... ..++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 345667788888888877432 4799999999999998888888664321 123455666666554
No 142
>PLN02310 triacylglycerol lipase
Probab=63.28 E-value=16 Score=37.61 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHCcCC-CCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 154 KTASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
...+++.+.+++..+.+++- ....+.|+|||.||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 34455677777777666531 2346999999999999988887775432 2344556667777654
No 143
>PLN02408 phospholipase A1
Probab=62.03 E-value=12 Score=38.09 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
...+++.+-|++.++++|... ..++|+|||.||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHh
Confidence 445667888888888888653 4699999999999998888888754
No 144
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=59.86 E-value=15 Score=33.43 Aligned_cols=65 Identities=18% Similarity=0.096 Sum_probs=41.0
Q ss_pred cccceEEeeCCCc--cccccccCCCCCccChHHHHHHHHHHHHHHHHHC-cCCCCCCEEEEeecccccchHHHHHH
Q 015858 124 KVSSIIYLDSPAG--VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELY-PEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 124 ~~anllfiD~PvG--~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
+.|-|.|++-... ...+-. .. .--...|.+|..|++..-..+ | ...+-++|||||...+-..++.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~---~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SP---GYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--Cc---hHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6788888754333 222211 00 112355677888888776666 3 3579999999999887666654
No 145
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=59.30 E-value=18 Score=36.34 Aligned_cols=59 Identities=22% Similarity=0.306 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
.+.+-++....++| +..++++|||-||..+...|..|...... ....++=+--|-|-+.
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcc
Confidence 34445555556777 46899999999999999999999876432 1234555556666543
No 146
>PRK14567 triosephosphate isomerase; Provisional
Probab=59.25 E-value=20 Score=34.55 Aligned_cols=61 Identities=23% Similarity=0.319 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.++++..++++++.++.+-....+=|. |||-.-|.=+..|++.. ++.|++||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 57788899999999987522212233344 99999999999998753 489999999988763
No 147
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=57.96 E-value=11 Score=35.52 Aligned_cols=102 Identities=25% Similarity=0.313 Sum_probs=62.4
Q ss_pred CeeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 59 ~~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
|.+|.|--+.+ .| --||-+-|-=||+-.. .+|-..+ .++ -. ...|+=+| |-|.|
T Consensus 30 g~ql~y~~~G~--G~---~~iLlipGalGs~~tD-----f~pql~~------------l~k--~l-~~TivawD-PpGYG 83 (277)
T KOG2984|consen 30 GTQLGYCKYGH--GP---NYILLIPGALGSYKTD-----FPPQLLS------------LFK--PL-QVTIVAWD-PPGYG 83 (277)
T ss_pred CceeeeeecCC--CC---ceeEeccccccccccc-----CCHHHHh------------cCC--CC-ceEEEEEC-CCCCC
Confidence 56777753221 22 3577788888887542 2332211 111 11 26799999 55999
Q ss_pred cccccCCC---CCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 139 LSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 139 fSy~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
-|+..+.. ++-..|.+.|-|+.+.|. + .+|-|.|-|=||.-+-..|.+
T Consensus 84 ~SrPP~Rkf~~~ff~~Da~~avdLM~aLk-----~-----~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 84 TSRPPERKFEVQFFMKDAEYAVDLMEALK-----L-----EPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred CCCCCcccchHHHHHHhHHHHHHHHHHhC-----C-----CCeeEeeecCCCeEEEEeecc
Confidence 99864321 122456777777777773 2 478899999999876655554
No 148
>PLN02934 triacylglycerol lipase
Probab=57.63 E-value=24 Score=37.38 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
++...|+++++++|. .+++++|||-||-.+-..|..+...
T Consensus 306 ~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 306 AVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 467778888888885 4799999999999988887766543
No 149
>PLN02847 triacylglycerol lipase
Probab=56.61 E-value=18 Score=39.01 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecC
Q 015858 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (399)
Q Consensus 159 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igN 218 (399)
+...|++-+..||.| ++.|+|||.||-.+..++..+.++.. .-++..+..|-
T Consensus 237 i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgP 288 (633)
T PLN02847 237 STPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecC
Confidence 334455556677764 79999999999998888766643321 23455666654
No 150
>PLN02429 triosephosphate isomerase
Probab=56.41 E-value=22 Score=35.43 Aligned_cols=61 Identities=23% Similarity=0.317 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.++.+..++++|+.+ +.+-....+-|. |||-.-|.-+..|... -+++|++||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 46778899999999875 433222344454 9999999999998865 3589999999998753
No 151
>PLN02162 triacylglycerol lipase
Probab=55.86 E-value=13 Score=38.94 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 158 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
.+.+.|+..+.++|. .+++++|||.||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 455667777778875 579999999999998777766654
No 152
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=54.34 E-value=4.7 Score=27.81 Aligned_cols=16 Identities=19% Similarity=0.106 Sum_probs=13.3
Q ss_pred HhhhcCchHHHhhhcC
Q 015858 359 ATLWLNDAAVRTAIHA 374 (399)
Q Consensus 359 ~~~YLN~pdVr~ALHV 374 (399)
.-.-|++||||++|++
T Consensus 16 l~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 16 LLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHcCHHHHHHHHH
Confidence 3457999999999985
No 153
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=54.17 E-value=65 Score=34.54 Aligned_cols=85 Identities=11% Similarity=-0.075 Sum_probs=50.0
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCC
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~ 205 (399)
..++-||-+ |-|.|... .. -++-..+.+.++|..+.+..+ ..++.++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~----~~-~ddY~~~~i~~al~~v~~~~g---~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQAD----KT-FDDYIRDGVIAALEVVEAITG---EKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCccccc----CC-hhhhHHHHHHHHHHHHHHhcC---CCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 467888876 77776321 11 112223346666666555443 4689999999999987653332222210
Q ss_pred CCeeeeeeeeecCCccCcc
Q 015858 206 KPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 206 ~~~inLkGi~igNg~~d~~ 224 (399)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 11367777777777754
No 154
>PLN03037 lipase class 3 family protein; Provisional
Probab=54.10 E-value=27 Score=37.18 Aligned_cols=45 Identities=16% Similarity=0.229 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHCcCC-CCCCEEEEeecccccchHHHHHHHHHh
Q 015858 156 ASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
-+++.+-++...+.+++. ....++|+|||.||-.+-..|..|...
T Consensus 297 reQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 297 SEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred HHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 345666777777777642 234699999999999998888777654
No 155
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=53.95 E-value=13 Score=34.54 Aligned_cols=64 Identities=23% Similarity=0.290 Sum_probs=44.4
Q ss_pred eEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 128 llfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
.|-.+-- |||-|-+.-. .-.++.+.|....+.++ ++||.-. .+.+.|-|+|+..+-.+|.+..+
T Consensus 63 tlRfNfR-gVG~S~G~fD--~GiGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 63 TLRFNFR-GVGRSQGEFD--NGIGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred EEeeccc-ccccccCccc--CCcchHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 3444533 9999866432 23577777777777776 4888632 36999999999988888887644
No 156
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=51.79 E-value=9.9 Score=35.34 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=28.2
Q ss_pred HHHHHCcCCCCCCEEEEeecccccchHHHHHHHH
Q 015858 165 KWFELYPEFLANPFFIAGESYAGIYVPTLAYEVM 198 (399)
Q Consensus 165 ~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~ 198 (399)
+|++.+|+...+++-|.|-|.||-.+-.+|.+..
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 5778999998889999999999999888888753
No 157
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=51.42 E-value=49 Score=34.87 Aligned_cols=85 Identities=19% Similarity=0.186 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccccccc--chh
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNA--LVP 232 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~~--~~~ 232 (399)
++.---..++.|+.+-|+| =|..|-|=||+=.-..|++..+. +.||+.|.|.++....... +..
T Consensus 98 ~~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d----------fDGIlAgaPA~~~~~~~~~~~~~~ 163 (474)
T PF07519_consen 98 TTVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED----------FDGILAGAPAINWTHLQLAHAWPA 163 (474)
T ss_pred HHHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh----------cCeEEeCCchHHHHHHHHHhhhhh
Confidence 3333446678888888754 69999999999998888887664 8999999999876443211 111
Q ss_pred hh-h--ccCCCCHHHHH----HHHHHhc
Q 015858 233 FV-H--GMGLISDDLYE----EVQNLCQ 253 (399)
Q Consensus 233 ~~-~--~~gli~~~~~~----~~~~~C~ 253 (399)
.+ . ..+.++...++ ++.++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 164 QVMYPDPGGYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcc
Confidence 11 1 13567766654 4456775
No 158
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.93 E-value=20 Score=35.17 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccc
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIY 189 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 189 (399)
.++++.+.+.+.......|+=..-++|+.|||-|..=
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g 122 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYG 122 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccc
Confidence 4567778888888888888866556999999987653
No 159
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=49.57 E-value=37 Score=32.58 Aligned_cols=65 Identities=22% Similarity=0.318 Sum_probs=46.5
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
..++=|+-| |-|=-+.. ...++.++.|..+...|.. -+..+|+-++|+|+||..+=.+|.++.+.
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 457778877 77744322 2345666667666666532 34568999999999999999999998775
No 160
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=48.12 E-value=36 Score=35.88 Aligned_cols=114 Identities=18% Similarity=0.315 Sum_probs=65.3
Q ss_pred eeEEEEEEecCCCCCCCCeEEEECCCCCchhhhhhhhh---cCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCc
Q 015858 60 RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYE---HGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAG 136 (399)
Q Consensus 60 ~~lfy~f~~s~~~p~~~PlvlWlnGGPG~SS~~g~f~e---~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG 136 (399)
..++|+|-+- .-+-||.+++.|==..-..-|.++- ..|| |||=|..+-
T Consensus 276 eEi~yYFnPG---D~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf--------------------------LL~~DpRle 326 (511)
T TIGR03712 276 QEFIYYFNPG---DFKPPLNVYFSGYRPAEGFEGYFMMKRLGAPF--------------------------LLIGDPRLE 326 (511)
T ss_pred CeeEEecCCc---CCCCCeEEeeccCcccCcchhHHHHHhcCCCe--------------------------EEeeccccc
Confidence 3577777332 2345999999985444444444321 1122 666675554
Q ss_pred cccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeee
Q 015858 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (399)
Q Consensus 137 ~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~i 216 (399)
-|==|. +.++--+.+.+.|++-++.- .|..+++.+.|=|+|..=+-..+. .++=.+|+|
T Consensus 327 GGaFYl--------Gs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiV 385 (511)
T TIGR03712 327 GGAFYL--------GSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIV 385 (511)
T ss_pred cceeee--------CcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEE
Confidence 443232 22222333555555555433 577789999999998765444444 345567777
Q ss_pred cCCccCc
Q 015858 217 GNGVTDE 223 (399)
Q Consensus 217 gNg~~d~ 223 (399)
|=|.++-
T Consensus 386 gKPL~NL 392 (511)
T TIGR03712 386 GKPLVNL 392 (511)
T ss_pred cCcccch
Confidence 7777654
No 161
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=45.95 E-value=12 Score=34.56 Aligned_cols=15 Identities=33% Similarity=0.955 Sum_probs=13.3
Q ss_pred CCCeEEEECCCCCch
Q 015858 75 KDPVVLWLNGGPGCS 89 (399)
Q Consensus 75 ~~PlvlWlnGGPG~S 89 (399)
+.|-|+|+=|||||-
T Consensus 6 ~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSG 20 (195)
T ss_pred cCCCEEEEEcCCCCC
Confidence 568999999999995
No 162
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=43.13 E-value=55 Score=29.55 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=50.1
Q ss_pred eEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH--HHHhcccCC
Q 015858 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE--VMKGIDAGE 205 (399)
Q Consensus 128 llfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~--i~~~~~~~~ 205 (399)
+--|+-|+..+.. .|..+..+-+.++...|+.+.++-| +.++.|+|-|-|+..+-.++.. +...
T Consensus 42 ~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~----- 107 (179)
T PF01083_consen 42 VQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD----- 107 (179)
T ss_dssp EEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH-----
T ss_pred EEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh-----
Confidence 4446677666552 1334556677888999999999999 3689999999999987777665 1110
Q ss_pred CCeeeeee-eeecCCccCc
Q 015858 206 KPVLNFKG-YLVGNGVTDE 223 (399)
Q Consensus 206 ~~~inLkG-i~igNg~~d~ 223 (399)
..=++.+ +++|||...+
T Consensus 108 -~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 -VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp -HHHHEEEEEEES-TTTBT
T ss_pred -hhhhEEEEEEecCCcccC
Confidence 0123455 5788887643
No 163
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=42.87 E-value=13 Score=37.98 Aligned_cols=64 Identities=25% Similarity=0.381 Sum_probs=34.7
Q ss_pred CCCCeEEEECCCCCc--hhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccc
Q 015858 74 SKDPVVLWLNGGPGC--SSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (399)
Q Consensus 74 ~~~PlvlWlnGGPG~--SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~G 138 (399)
++.|+=|-+.|.+|+ ||+.-.+-.+|+=.-.......-..+....+|.--++-|+.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfINalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFINALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHHHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHHHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 356888888886655 8888777777763221111000012445667777788999999999 887
No 164
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=42.39 E-value=1.6e+02 Score=31.00 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=24.8
Q ss_pred HHHHHHHHHHCcCCCCCCEEEEeecccccchHHHH
Q 015858 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 194 (399)
Q Consensus 160 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la 194 (399)
++++++....|.- ..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 5667776666652 235799999999999875544
No 165
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=42.09 E-value=67 Score=30.72 Aligned_cols=59 Identities=29% Similarity=0.425 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 153 LKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
.+.++++..++++++.. +.+ ....+-|. |||-.-|.=+..+.+.. ++.|++||.+.+++
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~ 234 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCH
Confidence 35678889999998875 333 23344444 99999999999888753 48999999998874
No 166
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=40.91 E-value=79 Score=30.85 Aligned_cols=67 Identities=21% Similarity=0.126 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHCcC--C-CCCCEEEEeecccccchHHHHHHHHHhcccCCCCeee--eeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFELYPE--F-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN--FKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~in--LkGi~igNg~~d~~ 224 (399)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++... -.+.++ |.|.+.|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~----YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS----YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH----hCcccccceeEEeccCCccCHH
Confidence 35566677777665544442 2 35689999999988754 344444332 135688 99999998876643
No 167
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=40.86 E-value=84 Score=33.28 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=45.3
Q ss_pred cceEEeeCCCccccccccCC---CCCc-cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 126 SSIIYLDSPAGVGLSYSENK---TDYV-TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~---~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
|.++.+|.. =-|-|..... .+.. -+..++-.|+.+|++.--.+|+.-.+.|++.+|-||.|....-+-.
T Consensus 119 A~v~~lEHR-FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 119 ATVFQLEHR-FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred CeeEEeeee-ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 667888864 2444432111 1111 3556777899999998888888655558999999999976544433
No 168
>PLN02561 triosephosphate isomerase
Probab=39.98 E-value=54 Score=31.65 Aligned_cols=60 Identities=23% Similarity=0.309 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 153 LKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
.+.++++..++++++.+ +..-....+-|. |||-.-|.-+..|... -++.|++||.+.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 46778889999998864 433223345454 9999999999998764 358999999999986
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.50 E-value=41 Score=37.57 Aligned_cols=93 Identities=20% Similarity=0.283 Sum_probs=52.9
Q ss_pred eEEEECCCCCch-------hhhhhhhhcCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCcc
Q 015858 78 VVLWLNGGPGCS-------SFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT 150 (399)
Q Consensus 78 lvlWlnGGPG~S-------S~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~ 150 (399)
-||++-|--|+- |...+....||++=. .+ .+||++. ++ .-+| ..=-||-= .-.
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t-----~~----~d~~~~~-DF---FaVD--FnEe~tAm-----~G~ 150 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKT-----ED----RDNPFSF-DF---FAVD--FNEEFTAM-----HGH 150 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHHhhhhcCCchhhh-----hc----ccCcccc-ce---EEEc--ccchhhhh-----ccH
Confidence 367888888863 344555678898733 11 3566665 22 2233 11111100 012
Q ss_pred ChHHHHHHHHHHHHHHHH---HCcCCC---CCCEEEEeecccccch
Q 015858 151 GDLKTASDTHTFLLKWFE---LYPEFL---ANPFFIAGESYAGIYV 190 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~---~fp~~~---~~~~yi~GESYgG~yv 190 (399)
...++++.+.+++..-+. .-+||+ ...+.|+||||||..+
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 345677777777665544 445565 4569999999999754
No 170
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=39.41 E-value=24 Score=32.78 Aligned_cols=56 Identities=20% Similarity=0.135 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
..+++..+|++ +++-...+ .+|+|.|.||.-+-.++.+-.+ .+.+++..+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPD----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTT----------TESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCcc----------ccccccccCcccccc
Confidence 34445555554 34433333 8999999999987777765322 278888888887664
No 171
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=39.26 E-value=48 Score=32.10 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHHHHH-HCc-----CCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 151 GDLKTASDTHTFLLKWFE-LYP-----EFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~-~fp-----~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
.+.+.+.++.++|.+=++ ..| .+ ..+.|+|||=||+-+-.++....+. ...+++++++..+|.=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEecccc
Confidence 445556666666544111 122 22 3699999999999655444433111 1246789999888874
No 172
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=38.77 E-value=32 Score=35.08 Aligned_cols=39 Identities=5% Similarity=0.069 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHH
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEV 197 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i 197 (399)
.+..+...++.-++.. ++++.|+|||+||.++-.+-+..
T Consensus 102 ~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhc
Confidence 3444555555544433 57999999999999876666555
No 173
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=38.50 E-value=82 Score=30.30 Aligned_cols=60 Identities=28% Similarity=0.373 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.++++..|+++++.. +. -....+-|. |||-.-|.=+..+... -++.|++||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 36778899999998864 33 112344444 9999999999998764 3589999999988653
No 174
>PRK07868 acyl-CoA synthetase; Validated
Probab=38.02 E-value=59 Score=37.42 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=25.4
Q ss_pred CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
.+++++|+|.||..+-.+|.. ... -.++++++.+.-+|
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~--~~~-------~~v~~lvl~~~~~d 178 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAY--RRS-------KDIASIVTFGSPVD 178 (994)
T ss_pred CceEEEEEChhHHHHHHHHHh--cCC-------CccceEEEEecccc
Confidence 589999999999998777653 111 12566665555444
No 175
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=37.58 E-value=65 Score=32.15 Aligned_cols=53 Identities=21% Similarity=0.172 Sum_probs=37.6
Q ss_pred ceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccc
Q 015858 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAG 187 (399)
Q Consensus 127 nllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 187 (399)
.+.-||.- --|.|-... ..+-+..|+|+..|+...-. .+...+..|.|||.||
T Consensus 82 ~v~~vd~R-nHG~Sp~~~----~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKIT----VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCcccc----ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 67778865 678773322 24567788888888875432 2445799999999999
No 176
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=36.73 E-value=31 Score=23.85 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=25.3
Q ss_pred CCccCcccccccchhhhhccCCCCHHHHHHHHH
Q 015858 218 NGVTDEEIDGNALVPFVHGMGLISDDLYEEVQN 250 (399)
Q Consensus 218 Ng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 250 (399)
.|.+||.....-.++-|...|+||.+++..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377888776666677899999999999887754
No 177
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=35.93 E-value=51 Score=29.57 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=27.3
Q ss_pred CCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
..+.+|+|||.|..-+-..+. ++ ...+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc------ccccccEEEEEcCCCc
Confidence 358999999999986655554 22 1356999999999844
No 178
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.70 E-value=59 Score=33.09 Aligned_cols=48 Identities=8% Similarity=0.085 Sum_probs=32.4
Q ss_pred CCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccc
Q 015858 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (399)
Q Consensus 176 ~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~ 225 (399)
..+||..||+|+--+-...+++.-++... ....++-+++-.|-+|-..
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~--l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRP--LPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcc--hhhhhhheEeeCCCCChhh
Confidence 58999999998876666666665443221 2345777888888777543
No 179
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=34.96 E-value=36 Score=34.14 Aligned_cols=68 Identities=22% Similarity=0.365 Sum_probs=42.5
Q ss_pred ccceEEeeCCCccc-ccccc----------CCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHH
Q 015858 125 VSSIIYLDSPAGVG-LSYSE----------NKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (399)
Q Consensus 125 ~anllfiD~PvG~G-fSy~~----------~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 193 (399)
..-|+|-|+-|||| |--.. ...-+..+..+-....|.||.+.|+ | +..+|++|-|=|...+=.|
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHHH
Confidence 45689999888876 22110 0011224455556667888876442 2 4689999999887666666
Q ss_pred HHHH
Q 015858 194 AYEV 197 (399)
Q Consensus 194 a~~i 197 (399)
|..|
T Consensus 140 agmi 143 (423)
T COG3673 140 AGMI 143 (423)
T ss_pred HHHH
Confidence 6554
No 180
>COG3596 Predicted GTPase [General function prediction only]
Probab=34.25 E-value=52 Score=32.33 Aligned_cols=60 Identities=25% Similarity=0.341 Sum_probs=37.0
Q ss_pred CCCCeEEEECC--CCCchhhh-hhhh-hcCCceeeCCCCCCCCCcccccCCCCcc--ccceEEeeCCCcccccc
Q 015858 74 SKDPVVLWLNG--GPGCSSFD-GFIY-EHGPFNFEAPTTKGSLPKLHVNPYSWTK--VSSIIYLDSPAGVGLSY 141 (399)
Q Consensus 74 ~~~PlvlWlnG--GPG~SS~~-g~f~-e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~anllfiD~PvG~GfSy 141 (399)
+..||.+.+-| |-|=||+. .+|+ |.=|-..- + ....+-.+.|.. .-||..+|.| |+|=+-
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~v-----g--~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg~ 101 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKV-----G--VGTDITTRLRLSYDGENLVLWDTP-GLGDGK 101 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeec-----c--cCCCchhhHHhhccccceEEecCC-Ccccch
Confidence 45799999998 77779998 6674 33333211 0 111122233333 3789999999 998663
No 181
>PF12728 HTH_17: Helix-turn-helix domain
Probab=33.93 E-value=9.4 Score=26.74 Aligned_cols=31 Identities=13% Similarity=0.178 Sum_probs=27.0
Q ss_pred hcCchHHHhhhcCCCCCCCceecCCCCCccc
Q 015858 362 WLNDAAVRTAIHAEPVSDLNFICYLSVPNFG 392 (399)
Q Consensus 362 YLN~pdVr~ALHV~~~~~~~w~C~~~~~~~~ 392 (399)
||+-.||.+.|+|+.++.-.|+-...+|.++
T Consensus 1 ~lt~~e~a~~l~is~~tv~~~~~~g~i~~~~ 31 (51)
T PF12728_consen 1 YLTVKEAAELLGISRSTVYRWIRQGKIPPFK 31 (51)
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHcCCCCeEE
Confidence 7889999999999988888998888887775
No 182
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=32.42 E-value=4.6e+02 Score=27.44 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=43.6
Q ss_pred ccceEEeeCCCccccccccCCCCCc-cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccch
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYV-TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~-~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 190 (399)
.+|.|+||.- =-|=|.... .++. -+..++|.|.+...+.|-..+| .++.-+|-|=||.-.
T Consensus 88 d~NQl~vEhR-fF~~SrP~p-~DW~~Lti~QAA~D~Hri~~A~K~iY~----~kWISTG~SKGGmTa 148 (448)
T PF05576_consen 88 DGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQAASDQHRIVQAFKPIYP----GKWISTGGSKGGMTA 148 (448)
T ss_pred ccceEEEEEe-eccCCCCCC-CCcccccHhHhhHHHHHHHHHHHhhcc----CCceecCcCCCceeE
Confidence 4899999965 234455432 2332 4677899999999999877776 368889999999853
No 183
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=32.22 E-value=78 Score=34.79 Aligned_cols=61 Identities=25% Similarity=0.293 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.|+++..||++++.. +..-....+=|. |||-.-|.-+..|.... ++.|++||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 57888999999999864 332212233333 99999999999998753 589999999888764
No 184
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.27 E-value=1.3e+02 Score=28.73 Aligned_cols=79 Identities=18% Similarity=0.282 Sum_probs=42.2
Q ss_pred cccccCCCCccccceEEeeCCCccccccccCC--------------CCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEE
Q 015858 114 KLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK--------------TDYVTGDLKTASDTHTFLLKWFELYPEFLANPFF 179 (399)
Q Consensus 114 ~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~--------------~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~y 179 (399)
+|..|. +...-+-|-||.+.+--||.-.... ..+..+..+.|..++..+. .|. +...+|
T Consensus 121 rLIIN~-~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v-----~pa-~~~sv~ 193 (297)
T KOG3967|consen 121 RLIINE-DLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIV-----LPA-KAESVF 193 (297)
T ss_pred hhhhcc-ccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHh-----ccc-CcceEE
Confidence 344443 2333455667777766666542111 1122334455554444432 232 335899
Q ss_pred EEeecccccchHHHHHHHHH
Q 015858 180 IAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 180 i~GESYgG~yvp~la~~i~~ 199 (399)
++.+||||---..+..+.-+
T Consensus 194 vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 194 VVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred EEEeccCChhHHHHHHhcCC
Confidence 99999999866555555433
No 185
>PRK15492 triosephosphate isomerase; Provisional
Probab=30.75 E-value=1.1e+02 Score=29.76 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHH-HCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 153 LKTASDTHTFLLKWFE-LYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+.+++...++++++. .+.+- ...+-|. |||-.-|.-+..|.... ++.|++||...+++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 4567888999999865 34322 2345555 99999999999998753 589999999888764
No 186
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=29.45 E-value=1.1e+02 Score=28.68 Aligned_cols=62 Identities=15% Similarity=0.131 Sum_probs=39.6
Q ss_pred cceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCC-CCEEEEeecccccchHHHHHHHHHh
Q 015858 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 126 anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
.=.+||| +|..- -.++|...++.+.+.+.+.+..-++-.. .++.-+| ||||+|.+...+++.
T Consensus 90 ~Ps~FvE--IGSte--------~eW~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 90 VPSVFVE--IGSTE--------EEWNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp SBEEEEE--EEESH--------HHHT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CCcEEEE--eCCCH--------HHhCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 3478888 44321 1367888888888888888877654321 3445566 899999999988875
No 187
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=29.22 E-value=88 Score=31.06 Aligned_cols=70 Identities=11% Similarity=-0.006 Sum_probs=39.8
Q ss_pred ChHHHHHHHHHHHHHHHHHCcC-CCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCccc
Q 015858 151 GDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~ 225 (399)
+.++.++|+..+++-+-..... +...++.|.|||=|-.=+-.... ..+... ..-.++|+|+-.|+-|.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~~--~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPSP--SRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT-----CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCccc--cccceEEEEEeCCCCChhH
Confidence 5667778887777665555422 34578999999999876544433 332111 1345899999999887654
No 188
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=29.02 E-value=1.6e+02 Score=29.98 Aligned_cols=59 Identities=20% Similarity=0.261 Sum_probs=40.4
Q ss_pred CccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccC
Q 015858 148 YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (399)
Q Consensus 148 ~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d 222 (399)
+..++..+++.+.+|-..-+ .|+..++.|.|-|-||.-+..+|.- .-++|++++- ...|
T Consensus 287 ~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLD-AtFD 345 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLD-ATFD 345 (517)
T ss_pred CcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEee-cchh
Confidence 44666666666666644322 4556899999999999988877763 3468888764 4334
No 189
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=28.85 E-value=33 Score=23.09 Aligned_cols=11 Identities=36% Similarity=1.120 Sum_probs=5.7
Q ss_pred CeEEEECCCCC
Q 015858 77 PVVLWLNGGPG 87 (399)
Q Consensus 77 PlvlWlnGGPG 87 (399)
--+||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 34789999887
No 190
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=28.60 E-value=1.2e+02 Score=27.71 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=27.5
Q ss_pred CCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCc
Q 015858 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (399)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~ 220 (399)
.+|.||++||-|+.-+...+.++.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh----------ccceEEEecCC
Confidence 4689999999998776666665543 37888888775
No 191
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=28.30 E-value=67 Score=29.25 Aligned_cols=28 Identities=25% Similarity=0.408 Sum_probs=22.9
Q ss_pred CCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 172 EFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 172 ~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
....-|+.|.|.||||.....+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4445699999999999999888887653
No 192
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=27.88 E-value=77 Score=29.17 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 155 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
..++.++.|.+++++..-|-. |.|-|-|+..+..|+.......... ....+|-+++.+|+.-+.
T Consensus 85 ~~~~sl~~l~~~i~~~GPfdG----vlGFSQGA~lAa~ll~~~~~~~~~~--~~~~~kf~V~~sg~~p~~ 148 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGPFDG----VLGFSQGAALAALLLALQQRGRPDG--AHPPFKFAVFISGFPPPD 148 (212)
T ss_dssp --HHHHHHHHHHHHHH---SE----EEEETHHHHHHHHHHHHHHHHST----T----SEEEEES----EE
T ss_pred CHHHHHHHHHHHHHhcCCeEE----EEeecHHHHHHHHHHHHHHhhcccc--cCCCceEEEEEcccCCCc
Confidence 345556677777666543333 8999999999988887766543211 235577777778875443
No 193
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.67 E-value=80 Score=33.15 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeeccccc
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 188 (399)
.++|+.+.+.+-...++-|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 467888999999989999987766799999998765
No 194
>COG3150 Predicted esterase [General function prediction only]
Probab=27.29 E-value=63 Score=29.50 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcccccc
Q 015858 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGN 228 (399)
Q Consensus 151 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~~~~~ 228 (399)
.-.+.++.+...++ ++..+..-|+|-|-||.|+-.|+.+- -|+.+ |.||.+-|.....
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~------------Girav-~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC------------GIRAV-VFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh------------CChhh-hcCCCcCchhhhh
Confidence 34455555666654 34455688999999999988877643 24443 4588888765443
No 195
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=26.90 E-value=49 Score=26.62 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHCcCCCCCCEEEEeecc
Q 015858 157 SDTHTFLLKWFELYPEFLANPFFIAGESY 185 (399)
Q Consensus 157 ~d~~~fL~~f~~~fp~~~~~~~yi~GESY 185 (399)
-|+|++.+.|+-+| |....|.+.|+||
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH
Confidence 35788899988876 4456899999998
No 196
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.69 E-value=1.1e+02 Score=28.91 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHH
Q 015858 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (399)
Q Consensus 153 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 196 (399)
.+...|+..++ .|+.+.|+-....+.++|-|+||+.+=.+|..
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 45555555554 57778887666789999999999987666654
No 197
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=25.80 E-value=43 Score=34.18 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=22.1
Q ss_pred CEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 177 PFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 177 ~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
.+-++||||||.-+-..+.. . ..++..++-+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~---d--------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQ---D--------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHhh---c--------cCcceEEEeCCcccCC
Confidence 58999999999766544432 2 2267777888888764
No 198
>PTZ00333 triosephosphate isomerase; Provisional
Probab=25.53 E-value=1.3e+02 Score=29.06 Aligned_cols=61 Identities=25% Similarity=0.392 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHH-CcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCc
Q 015858 152 DLKTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~ 223 (399)
+.+.++++..++++++.. +.......+-|. |||-.-|.-+..|... -++.|++||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 446788899999998864 332222334444 9999999999998764 358999999988863
No 199
>PRK14565 triosephosphate isomerase; Provisional
Probab=25.26 E-value=1.2e+02 Score=28.92 Aligned_cols=54 Identities=15% Similarity=0.189 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCccCcc
Q 015858 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (399)
Q Consensus 152 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~d~~ 224 (399)
+.+.++++..+++++. .++-|. |||-.-|.-+..+.+. -++.|++||.+.+++.
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHH
Confidence 4467788889998862 133333 9999999999998874 2489999999998764
No 200
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=24.86 E-value=2.4e+02 Score=28.60 Aligned_cols=61 Identities=16% Similarity=0.055 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHhcccCCCCeeeeeeeeecCCcc
Q 015858 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (399)
Q Consensus 156 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~~~~~~~~~inLkGi~igNg~~ 221 (399)
|+..-..|.+.+....+ ..||+-|+|+|-|+..+=.-...+.++... .+--.-+++|.|..
T Consensus 201 A~~aG~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 201 AEKAGKVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCC
Confidence 44444455555544444 568999999999999998888888776322 22223455665553
No 201
>COG0218 Predicted GTPase [General function prediction only]
Probab=24.20 E-value=1.1e+02 Score=28.47 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=40.1
Q ss_pred CCchhhhhhhhh-cCCceeeCCCCCCCCCcccccCCCCccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHH
Q 015858 86 PGCSSFDGFIYE-HGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLL 164 (399)
Q Consensus 86 PG~SS~~g~f~e-~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~ 164 (399)
=|=||+.-.+.. -+=-++. ...|.+...|-+.|.+. +.+||-| |.||--.. .+.-+..-+++.
T Consensus 35 VGKSSlIN~l~~~k~LArtS----ktPGrTq~iNff~~~~~--~~lVDlP-GYGyAkv~---------k~~~e~w~~~i~ 98 (200)
T COG0218 35 VGKSSLINALTNQKNLARTS----KTPGRTQLINFFEVDDE--LRLVDLP-GYGYAKVP---------KEVKEKWKKLIE 98 (200)
T ss_pred ccHHHHHHHHhCCcceeecC----CCCCccceeEEEEecCc--EEEEeCC-CcccccCC---------HHHHHHHHHHHH
Confidence 477888744422 2211221 12345667888888776 8899999 88886331 133344555666
Q ss_pred HHHHHC
Q 015858 165 KWFELY 170 (399)
Q Consensus 165 ~f~~~f 170 (399)
.|++..
T Consensus 99 ~YL~~R 104 (200)
T COG0218 99 EYLEKR 104 (200)
T ss_pred HHHhhc
Confidence 655543
No 202
>PRK03995 hypothetical protein; Provisional
Probab=24.17 E-value=1.3e+02 Score=29.33 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=31.4
Q ss_pred cChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHHh
Q 015858 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (399)
Q Consensus 150 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~ 200 (399)
+.|..+++.+.+.+...+..-+.-...++.-+| ||||+|.+...+++.
T Consensus 156 W~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 156 WKNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred hCCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 566677777777777766532111123444466 899999999988764
No 203
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=23.75 E-value=93 Score=28.61 Aligned_cols=44 Identities=20% Similarity=0.331 Sum_probs=33.8
Q ss_pred ccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCc
Q 015858 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYP 171 (399)
Q Consensus 125 ~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp 171 (399)
..-+|+++ ..+|||++-+.+ +..++.+.++++...|.+|+..++
T Consensus 122 ~g~~v~L~--f~tG~siPLTqs-a~~G~~~dve~IA~~I~~FL~l~~ 165 (187)
T PF15169_consen 122 KGYLVVLR--FATGFSIPLTQS-ATLGDRSDVEAIAKLINKFLELNP 165 (187)
T ss_pred cceEEEEE--ccCCcceeccce-EEecCchHHHHHHHHHHHHHhhcc
Confidence 34567777 467999986654 346778888899999999998876
No 204
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=22.82 E-value=69 Score=27.64 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=14.6
Q ss_pred CCCCCeEEEECCCCCch
Q 015858 73 PSKDPVVLWLNGGPGCS 89 (399)
Q Consensus 73 p~~~PlvlWlnGGPG~S 89 (399)
..++||||-|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 34679999999999985
No 205
>PRK06762 hypothetical protein; Provisional
Probab=22.52 E-value=51 Score=28.70 Aligned_cols=13 Identities=15% Similarity=0.526 Sum_probs=11.8
Q ss_pred CeEEEECCCCCch
Q 015858 77 PVVLWLNGGPGCS 89 (399)
Q Consensus 77 PlvlWlnGGPG~S 89 (399)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999986
No 206
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=22.42 E-value=1.6e+02 Score=19.92 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=13.0
Q ss_pred eeEEEEEEecCCCCCCCCeEEEECCCCC
Q 015858 60 RNLFYYFVESEGNPSKDPVVLWLNGGPG 87 (399)
Q Consensus 60 ~~lfy~f~~s~~~p~~~PlvlWlnGGPG 87 (399)
.+-+|||..+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 3556677444433223334444445554
No 207
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=22.34 E-value=68 Score=29.21 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHH
Q 015858 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 154 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~ 195 (399)
...+++..+ .+|++..|+....++-++|-|+||.++-.+|.
T Consensus 77 ~~~~~~~aa-~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 77 QVAADLQAA-VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHH-HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHH-HHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 344444333 45667777666678999999999998766554
No 208
>smart00581 PSP proline-rich domain in spliceosome associated proteins.
Probab=22.09 E-value=49 Score=24.21 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=16.1
Q ss_pred chHHHhhhcCCCCCCCcee
Q 015858 365 DAAVRTAIHAEPVSDLNFI 383 (399)
Q Consensus 365 ~pdVr~ALHV~~~~~~~w~ 383 (399)
..+.|+||++.+...+-|+
T Consensus 10 S~~LR~ALG~~~~~pPPWl 28 (54)
T smart00581 10 SDELREALGLPPGQPPPWL 28 (54)
T ss_pred CHHHHHHcCCCCCCCChHH
Confidence 4678999999999888784
No 209
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.99 E-value=5.7e+02 Score=26.49 Aligned_cols=116 Identities=24% Similarity=0.311 Sum_probs=62.0
Q ss_pred CCeeEEEEEEecC-C-CCCC-CCeEEEECCCCCchhhhhhhhhcCCceeeCCCCCCCCCcccccCCCCcc--ccceEEee
Q 015858 58 HGRNLFYYFVESE-G-NPSK-DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK--VSSIIYLD 132 (399)
Q Consensus 58 ~~~~lfy~f~~s~-~-~p~~-~PlvlWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~anllfiD 132 (399)
+|-+++|.-+.-. . ..++ .| +|.++|=||+=-- |.-+=|..-++ +.++-.. .+.||-=-
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~P-lLl~HGwPGsv~E---FykfIPlLT~p------------~~hg~~~d~~FEVI~PS 195 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKP-LLLLHGWPGSVRE---FYKFIPLLTDP------------KRHGNESDYAFEVIAPS 195 (469)
T ss_pred cceeEEEEEecCCccccCCcccc-eEEecCCCchHHH---HHhhhhhhcCc------------cccCCccceeEEEeccC
Confidence 3557777654422 1 1222 35 4568999997432 22222333221 1111111 23344333
Q ss_pred CCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccchHHHHHHHHH
Q 015858 133 SPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (399)
Q Consensus 133 ~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~ 199 (399)
-| |-|||-..+..+ .+..++|.-+...+ -| +.-++|||-|--||......+|....+
T Consensus 196 lP-GygwSd~~sk~G--Fn~~a~ArvmrkLM----lR---Lg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 196 LP-GYGWSDAPSKTG--FNAAATARVMRKLM----LR---LGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred CC-CcccCcCCccCC--ccHHHHHHHHHHHH----HH---hCcceeEeecCchHHHHHHHHHhhcch
Confidence 34 888886655444 35566665444443 33 334789998777988888888776554
No 210
>PF04046 PSP: PSP; InterPro: IPR006568 PSP is a proline-rich domain of unknown function found in spliceosome associated proteins.
Probab=21.78 E-value=52 Score=23.51 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=16.2
Q ss_pred chHHHhhhcCCCCCCCcee
Q 015858 365 DAAVRTAIHAEPVSDLNFI 383 (399)
Q Consensus 365 ~pdVr~ALHV~~~~~~~w~ 383 (399)
..+.|+||++.+...+-|+
T Consensus 6 S~~LR~ALg~~~~~~PPwl 24 (48)
T PF04046_consen 6 SDELREALGMQENDPPPWL 24 (48)
T ss_pred CHHHHHHcCCCCCCCChHH
Confidence 4678999999999888885
No 211
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=21.69 E-value=99 Score=30.61 Aligned_cols=50 Identities=26% Similarity=0.453 Sum_probs=34.5
Q ss_pred ccccceEEeeCCCccccccccCCCCCccChHHHHHHHHHHHHHHHHHCcCCCCCCEEEEeecccccc
Q 015858 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIY 189 (399)
Q Consensus 123 ~~~anllfiD~PvG~GfSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 189 (399)
++.+-+|-||-|+|+|.+ ..|+++.+-|- |..||++.-..+|+ .|||+--
T Consensus 68 ~enSkvI~VeGnI~sGK~-------------klAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 68 HENSKVIVVEGNIGSGKT-------------KLAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred cccceEEEEeCCcccCch-------------hHHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 345669999999999976 23444444443 46799988767776 6888753
No 212
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=21.62 E-value=95 Score=33.82 Aligned_cols=21 Identities=10% Similarity=0.151 Sum_probs=17.2
Q ss_pred CCCEEEEeecccccchHHHHH
Q 015858 175 ANPFFIAGESYAGIYVPTLAY 195 (399)
Q Consensus 175 ~~~~yi~GESYgG~yvp~la~ 195 (399)
++++.|+|||+||.++=.+-.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 478999999999988766554
No 213
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=20.80 E-value=1.1e+02 Score=31.62 Aligned_cols=36 Identities=39% Similarity=0.776 Sum_probs=26.0
Q ss_pred ceEEEEEEecCCCCeeEEEEEEecCCCCCCCCeE-EEECC
Q 015858 46 KHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVV-LWLNG 84 (399)
Q Consensus 46 ~~~sGyl~v~~~~~~~lfy~f~~s~~~p~~~Plv-lWlnG 84 (399)
....|||+.++ .+++.. ..|+.....+-||| +||.|
T Consensus 199 ~~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 45899999994 577777 56665445566776 89886
No 214
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=20.23 E-value=89 Score=28.85 Aligned_cols=22 Identities=27% Similarity=0.705 Sum_probs=15.0
Q ss_pred CCCCeEEEECC--CCCchhhhhhh
Q 015858 74 SKDPVVLWLNG--GPGCSSFDGFI 95 (399)
Q Consensus 74 ~~~PlvlWlnG--GPG~SS~~g~f 95 (399)
..+|.+|||.| |-|=|.+..++
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~al 43 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANAL 43 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHH
Confidence 46799999999 44555554443
Done!