BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>015859
MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRDAEEADAEEIID
MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA
VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV
GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDGL
TLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGMVP
NVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRFGSFWFKWGSGSGSSTPVLKTLALV
ATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS

High Scoring Gene Products

Symbol, full name Information P value
AT5G23200 protein from Arabidopsis thaliana 5.6e-132
AT5G08270 protein from Arabidopsis thaliana 2.9e-110

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  015859
        (399 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2166801 - symbol:AT5G23200 "AT5G23200" species...  1294  5.6e-132  1
TAIR|locus:2181519 - symbol:AT5G08270 "AT5G08270" species...  1089  2.9e-110  1


>TAIR|locus:2166801 [details] [associations]
            symbol:AT5G23200 "AT5G23200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AY074497 EMBL:AY091243
            IPI:IPI00524269 RefSeq:NP_197711.2 UniGene:At.28796
            ProteinModelPortal:Q8RUI8 PaxDb:Q8RUI8 PRIDE:Q8RUI8
            EnsemblPlants:AT5G23200.1 GeneID:832384 KEGG:ath:AT5G23200
            eggNOG:NOG82968 OMA:YLITRYD ProtClustDB:CLSN2687275
            Genevestigator:Q8RUI8 Uniprot:Q8RUI8
        Length = 399

 Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
 Identities = 246/401 (61%), Positives = 300/401 (74%)

Query:     1 MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRXXXXXXXXXXXX 60
             MA LF KFQ+AV  LAKS TFA++PRQLQFEAD+N+LF+YTSYNRLGR            
Sbjct:     1 MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYNRLGREAEETDAEEIIE 60

Query:    61 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
             MAGKA+LS+QQ+QV +NIH Q+++FC  MD ILL   +     S + S   PRRSGL+FA
Sbjct:    61 MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVRRNESGSQSTSPRPPRRSGLTFA 120

Query:   121 VGPT-ARP-TDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEA 178
             +G   A P  D P+VP+T+ L   ++SQRL D +GYTL+ KPS IPH++AGQG F+ GEA
Sbjct:   121 IGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKGEA 180

Query:   179 NVGAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWD 238
             +VG V+A YPG+IYSPA+Y+YIPGYP+VD+QN YLITRYDGTVINAQPWG G ++RE W+
Sbjct:   181 DVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREAWN 240

Query:   239 GLTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSEMLERRNPLALAHFANHPAKGM 298
             G   P +  N+K AE GSD+ WK LSKP++    G G E+LERRNPLA  H ANHPAK M
Sbjct:   241 GSYTPAVKANTKTAENGSDRLWKALSKPLEGS--GKGKEVLERRNPLAFGHLANHPAKEM 298

Query:   299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 358
              PNVMICPYDFPL  KD+RPYIPNISFG++ E+ M+R                PVLKTL 
Sbjct:   299 TPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKTGSKNGLEAPVLKTLV 358

Query:   359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDEEEDRRRWS 399
             LVATR++C+EE+LLNYRLSNSKRRP WY+PV+EEEDRRRWS
Sbjct:   359 LVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399


>TAIR|locus:2181519 [details] [associations]
            symbol:AT5G08270 "AT5G08270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 UniGene:At.48996 UniGene:At.5343
            IPI:IPI00535654 RefSeq:NP_196444.1 ProteinModelPortal:F4K9N6
            SMR:F4K9N6 PRIDE:F4K9N6 EnsemblPlants:AT5G08270.1 GeneID:830723
            KEGG:ath:AT5G08270 OMA:FEADINK Uniprot:F4K9N6
        Length = 386

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 217/393 (55%), Positives = 273/393 (69%)

Query:     1 MAFLFQKFQEAVKTLAKSPTFARDPRQLQFEADMNRLFLYTSYNRLGRXXXXXXXXXXXX 60
             M FLF KFQ+ V  LAKS TFA++PRQLQFEAD+N+LF++TSYNRLGR            
Sbjct:     6 MMFLFGKFQQGVGVLAKSTTFAKNPRQLQFEADINKLFMFTSYNRLGRDAEEADAEEIIE 65

Query:    61 MAGKASLSDQQQQVLDNIHSQIKRFCLSMDEILLLPEKNVPIESSAQSNAAPRRSGLSFA 120
             MAGKA+ S+QQ+QV +NIH Q++ FC SM+EILL    N  I+ +   N     S     
Sbjct:    66 MAGKATFSEQQKQVQENIHYQLQNFCSSMNEILLT---N--IDKTKDLNEPGSESRRDNI 120

Query:   121 VGPTARPTDSPVVPQTRQLTRTELSQRLKDAIGYTLDLKPSQIPHEEAGQGLFLCGEANV 180
             V P A   D P+VP+T+ L   E+S RLKD +GYTL++KPS IPH++AGQG F+ GEA+V
Sbjct:   121 V-PAA---DKPIVPETKPLKLDEVSHRLKDRVGYTLEIKPSLIPHKDAGQGCFIEGEADV 176

Query:   181 GAVIAIYPGIIYSPAYYRYIPGYPRVDAQNPYLITRYDGTVINAQPWGSGWDTRELWDG- 239
             GAV+A YPG+IYSPA++RYIPGYP VDAQN YLIT YDGTVINAQPWG G  +RE+W+G 
Sbjct:   177 GAVLAFYPGVIYSPAFHRYIPGYPNVDAQNSYLITGYDGTVINAQPWGRGGISREVWNGS 236

Query:   240 LTLPEIMPNSKGAEKGSDQFWKLLSKPMDNKRGGSGSE-MLERRNPLALAHFANHPAKGM 298
              T PEI   +   E  SD+ WK+LS+P++   G  G E ++E RNPLA  HF NHP K M
Sbjct:   237 FTTPEIRTEATTTENSSDKVWKMLSRPLE---GSGGVEAVIEMRNPLAFGHFINHPGKEM 293

Query:   299 VPNVMICPYDFPLTEKDMRPYIPNISFGNAEEVNMRRXXXXXXXXXXXXXXXTPVLKTLA 358
               NVMICPYDF L+E +MR YIPN++FGN  +V M R                 VLKT+ 
Sbjct:   294 ESNVMICPYDFLLSETEMRAYIPNVAFGNTGDVKMGRFESFLSRTGSNSSLDAHVLKTIV 353

Query:   359 LVATRAICDEEVLLNYRLSNSKRRPVWYSPVDE 391
             LVAT+A+C+EE++LNYRLSNS++R  WY P+DE
Sbjct:   354 LVATKALCNEELMLNYRLSNSEKRLEWYIPLDE 386


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      399       372   0.00087  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  244 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.40u 0.08s 29.48t   Elapsed:  00:00:01
  Total cpu time:  29.40u 0.08s 29.48t   Elapsed:  00:00:01
  Start:  Thu May  9 17:20:44 2013   End:  Thu May  9 17:20:45 2013

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