Your job contains 1 sequence.
>015861
MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKPSRSE
SAASSSSSVSHPSRATSSGITKVPGVMPELSALSRPFLPPNKTAWNPESVCNDSLENDEV
DEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCE
KKQKHLEALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTS
GMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNC
PFGTSCFYKHMVKPGSYMWKYHRPPPRRPPPFRPPPSRSNVVDMDSFIDAFGDLLGEDEP
DFFDAENEVRMALDVEMALLLTQLDFDSSDSSDYESYLD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015861
(399 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2831040 - symbol:AT3G08505 species:3702 "Arabi... 887 1.1e-114 2
UNIPROTKB|G3V789 - symbol:Mkrn1 "Protein Mkrn1" species:1... 473 9.9e-64 2
UNIPROTKB|Q9UHC7 - symbol:MKRN1 "E3 ubiquitin-protein lig... 470 1.6e-63 2
UNIPROTKB|F1SRP7 - symbol:MKRN1 "Uncharacterized protein"... 470 2.0e-63 2
RGD|1310618 - symbol:Mkrn2 "makorin, ring finger protein,... 463 3.3e-63 2
MGI|MGI:1859353 - symbol:Mkrn1 "makorin, ring finger prot... 466 5.4e-63 2
UNIPROTKB|E2RRA5 - symbol:MKRN1 "Uncharacterized protein"... 472 6.9e-63 2
UNIPROTKB|Q9PTI4 - symbol:MKRN1 "Uncharacterized protein"... 479 1.1e-62 2
MGI|MGI:1914277 - symbol:Mkrn2 "makorin, ring finger prot... 455 2.3e-62 2
UNIPROTKB|F1MF12 - symbol:MKRN1 "Uncharacterized protein"... 473 3.7e-62 2
UNIPROTKB|E2REH2 - symbol:MKRN2 "Uncharacterized protein"... 455 4.8e-62 2
UNIPROTKB|F1M3I4 - symbol:Mkrn2 "Protein Mkrn2" species:1... 463 9.9e-62 2
UNIPROTKB|Q9H000 - symbol:MKRN2 "Probable E3 ubiquitin-pr... 453 9.9e-62 2
UNIPROTKB|Q6GLD9 - symbol:mkrn2 "Probable E3 ubiquitin-pr... 449 2.9e-60 2
ZFIN|ZDB-GENE-020213-2 - symbol:mkrn2 "makorin, ring fing... 440 4.8e-60 2
ZFIN|ZDB-GENE-020213-1 - symbol:mkrn1 "makorin, ring fing... 454 6.1e-60 2
UNIPROTKB|Q13434 - symbol:MKRN4P "Putative E3 ubiquitin-p... 469 7.8e-60 2
UNIPROTKB|B0F0H3 - symbol:mkrn2 "Probable E3 ubiquitin-pr... 451 1.6e-59 2
UNIPROTKB|C9J494 - symbol:MKRN2 "Probable E3 ubiquitin-pr... 453 4.2e-59 2
UNIPROTKB|J9P921 - symbol:J9P921 "Uncharacterized protein... 452 8.8e-59 2
UNIPROTKB|F1NI93 - symbol:MKRN2 "Uncharacterized protein"... 448 2.9e-58 2
UNIPROTKB|I3LPL9 - symbol:MKRN2 "Uncharacterized protein"... 466 1.8e-54 2
UNIPROTKB|Q13064 - symbol:MKRN3 "Probable E3 ubiquitin-pr... 460 2.0e-51 2
UNIPROTKB|J9P9K3 - symbol:MKRN3 "Uncharacterized protein"... 431 1.8e-48 2
MGI|MGI:2181178 - symbol:Mkrn3 "makorin, ring finger prot... 422 2.6e-47 2
RGD|1311197 - symbol:Mkrn3 "makorin, ring finger protein,... 421 3.3e-47 2
UNIPROTKB|I3LLV1 - symbol:MKRN2 "Uncharacterized protein"... 466 1.1e-46 2
UNIPROTKB|B4DPR4 - symbol:MKRN2 "cDNA FLJ52346, highly si... 453 2.6e-45 2
UNIPROTKB|F1MRH0 - symbol:MKRN1 "Uncharacterized protein"... 304 5.9e-44 2
WB|WBGene00021924 - symbol:Y55F3AM.6 species:6239 "Caenor... 458 2.2e-43 1
DICTYBASE|DDB_G0281657 - symbol:DDB_G0281657 "Probable E3... 409 2.4e-43 2
FB|FBgn0030578 - symbol:CG5347 species:7227 "Drosophila m... 398 1.4e-42 2
UNIPROTKB|F1SNR8 - symbol:MKRN3 "Uncharacterized protein"... 382 1.8e-42 2
UNIPROTKB|G3MWT5 - symbol:G3MWT5 "Uncharacterized protein... 400 3.6e-42 2
UNIPROTKB|F1PZ14 - symbol:F1PZ14 "Uncharacterized protein... 344 4.6e-42 2
UNIPROTKB|F6QQR5 - symbol:MKRN2 "Uncharacterized protein"... 375 2.5e-41 2
FB|FBgn0029152 - symbol:Mkrn1 "Makorin 1" species:7227 "D... 379 6.6e-41 2
ZFIN|ZDB-GENE-030131-5954 - symbol:mkrn4 "makorin, ring f... 259 4.3e-33 2
FB|FBgn0030577 - symbol:CG5334 species:7227 "Drosophila m... 302 2.3e-31 2
DICTYBASE|DDB_G0268546 - symbol:DDB_G0268546 species:4468... 221 2.3e-30 2
UNIPROTKB|F5H0I9 - symbol:MKRN1 "E3 ubiquitin-protein lig... 315 3.1e-28 1
UNIPROTKB|C9IY57 - symbol:MKRN1 "E3 ubiquitin-protein lig... 167 1.3e-25 2
UNIPROTKB|I3LVF6 - symbol:I3LVF6 "Uncharacterized protein... 213 1.2e-24 2
FB|FBgn0036809 - symbol:CG12477 species:7227 "Drosophila ... 266 4.8e-23 1
UNIPROTKB|E1BYP2 - symbol:Gga.11719 "Uncharacterized prot... 259 2.6e-22 1
UNIPROTKB|J9NRX8 - symbol:MKRN1 "Uncharacterized protein"... 235 9.2e-20 1
UNIPROTKB|C9J031 - symbol:MKRN1 "E3 ubiquitin-protein lig... 167 9.6e-17 2
UNIPROTKB|C9IZP5 - symbol:MKRN1 "E3 ubiquitin-protein lig... 175 6.4e-13 1
UNIPROTKB|C9JYX8 - symbol:MKRN1 "E3 ubiquitin-protein lig... 167 5.0e-12 1
UNIPROTKB|C9J7K5 - symbol:MKRN1 "E3 ubiquitin-protein lig... 166 6.4e-12 1
UNIPROTKB|F8WAS8 - symbol:MKRN1 "E3 ubiquitin-protein lig... 161 2.3e-11 1
POMBASE|SPAC227.08c - symbol:yth1 "mRNA cleavage and poly... 125 6.8e-11 2
UNIPROTKB|H9KVA5 - symbol:CPSF4L "Putative cleavage and p... 112 2.9e-09 2
CGD|CAL0005897 - symbol:YTH1 species:5476 "Candida albica... 135 9.3e-09 2
UNIPROTKB|Q59T36 - symbol:YTH1 "mRNA 3'-end-processing pr... 135 9.3e-09 2
UNIPROTKB|C9JYI0 - symbol:MKRN1 "E3 ubiquitin-protein lig... 132 3.6e-08 1
UNIPROTKB|C9K0K2 - symbol:CPSF4 "Cleavage and polyadenyla... 108 6.7e-08 2
POMBASE|SPAC3A11.02 - symbol:cps3 "zinc finger protein Cp... 153 1.5e-07 2
UNIPROTKB|F1LTU5 - symbol:Zc3h6 "Protein Zc3h6" species:1... 147 2.0e-07 2
ASPGD|ASPL0000062209 - symbol:AN0298 species:162425 "Emer... 103 4.5e-07 2
UNIPROTKB|A6NMK7 - symbol:CPSF4L "Putative cleavage and p... 116 4.9e-07 2
MGI|MGI:1926001 - symbol:Zc3h6 "zinc finger CCCH type con... 147 5.3e-07 2
UNIPROTKB|E1C259 - symbol:ZC3H6 "Uncharacterized protein"... 136 1.4e-06 2
MGI|MGI:2682314 - symbol:Zc3h4 "zinc finger CCCH-type con... 137 1.7e-06 2
UNIPROTKB|D4A5G7 - symbol:LOC678741 "Protein LOC678741" s... 137 2.5e-06 2
POMBASE|SPCC1739.01 - symbol:SPCC1739.01 "zf-CCCH type zi... 138 2.9e-06 1
UNIPROTKB|F1SUA3 - symbol:ZC3H6 "Uncharacterized protein"... 134 3.7e-06 2
UNIPROTKB|B7Z7B0 - symbol:CPSF4 "Cleavage and polyadenyla... 108 6.1e-06 3
UNIPROTKB|F1MCW9 - symbol:ZC3H6 "Uncharacterized protein"... 134 7.3e-06 2
UNIPROTKB|I3LVF0 - symbol:I3LVF0 "Uncharacterized protein... 102 1.2e-05 2
UNIPROTKB|E2RSL2 - symbol:ZC3H4 "Uncharacterized protein"... 137 1.4e-05 2
UNIPROTKB|F1PWF3 - symbol:ZC3H6 "Uncharacterized protein"... 134 1.5e-05 2
UNIPROTKB|E2RBM0 - symbol:CPSF4 "Uncharacterized protein"... 108 1.6e-05 2
MGI|MGI:1930128 - symbol:Zc3h8 "zinc finger CCCH type con... 127 1.7e-05 1
RGD|1310458 - symbol:Zc3h8 "zinc finger CCCH type contain... 127 1.7e-05 1
UNIPROTKB|Q9UPT8 - symbol:ZC3H4 "Zinc finger CCCH domain-... 137 1.8e-05 2
UNIPROTKB|E1BHZ4 - symbol:ZC3H4 "Uncharacterized protein"... 137 1.8e-05 2
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 94 3.2e-05 3
UNIPROTKB|Q8N5P1 - symbol:ZC3H8 "Zinc finger CCCH domain-... 124 3.3e-05 1
SGD|S000006311 - symbol:YTH1 "Essential RNA-binding compo... 105 3.4e-05 2
UNIPROTKB|Q17QY2 - symbol:ZC3H8 "Zinc finger CCCH-type co... 124 3.7e-05 1
UNIPROTKB|F1SUA1 - symbol:ZC3H8 "Uncharacterized protein"... 124 3.8e-05 1
SGD|S000005975 - symbol:LEE1 "Zinc-finger protein of unkn... 123 4.7e-05 1
UNIPROTKB|P61129 - symbol:ZC3H6 "Zinc finger CCCH domain-... 134 5.0e-05 2
UNIPROTKB|O19137 - symbol:CPSF4 "Cleavage and polyadenyla... 108 5.4e-05 3
UNIPROTKB|I3LCK9 - symbol:LOC100738395 "Uncharacterized p... 108 5.4e-05 3
RGD|620440 - symbol:Cpsf4 "cleavage and polyadenylation s... 108 5.4e-05 3
ZFIN|ZDB-GENE-990415-180 - symbol:cpsf4 "cleavage and pol... 108 5.5e-05 2
UNIPROTKB|E2RFS8 - symbol:ZC3H8 "Uncharacterized protein"... 124 6.1e-05 1
DICTYBASE|DDB_G0270148 - symbol:cpsf4 "cleavage and polya... 111 7.1e-05 3
UNIPROTKB|D4A905 - symbol:Cpsf4 "Cleavage and polyadenyla... 108 8.7e-05 2
UNIPROTKB|J9P398 - symbol:CPSF4 "Uncharacterized protein"... 108 0.00011 3
UNIPROTKB|O95639 - symbol:CPSF4 "Cleavage and polyadenyla... 108 0.00011 3
UNIPROTKB|E1BV31 - symbol:CPSF4 "Uncharacterized protein"... 108 0.00011 3
FB|FBgn0015621 - symbol:Clp "Clipper" species:7227 "Droso... 104 0.00011 2
UNIPROTKB|F1REX3 - symbol:LOC100518830 "Uncharacterized p... 108 0.00014 2
UNIPROTKB|C9JEV9 - symbol:CPSF4 "Cleavage and polyadenyla... 103 0.00017 2
MGI|MGI:1861602 - symbol:Cpsf4 "cleavage and polyadenylat... 103 0.00017 2
UNIPROTKB|E2RBK7 - symbol:CPSF4 "Uncharacterized protein"... 103 0.00017 2
CGD|CAL0005238 - symbol:orf19.5438 species:5476 "Candida ... 97 0.00024 1
WARNING: Descriptions of 9 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2831040 [details] [associations]
symbol:AT3G08505 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC074395 EMBL:AY070366 EMBL:BT000988 IPI:IPI00544837
RefSeq:NP_850540.1 RefSeq:NP_974255.1 UniGene:At.28383
ProteinModelPortal:Q6IDS6 SMR:Q6IDS6 PaxDb:Q6IDS6 PRIDE:Q6IDS6
EnsemblPlants:AT3G08505.1 EnsemblPlants:AT3G08505.2 GeneID:819998
KEGG:ath:AT3G08505 TAIR:At3g08505 eggNOG:NOG268458
HOGENOM:HOG000252976 InParanoid:Q6IDS6 KO:K15687 OMA:FEEGANS
PhylomeDB:Q6IDS6 ProtClustDB:CLSN2690786 Genevestigator:Q6IDS6
Uniprot:Q6IDS6
Length = 323
Score = 887 (317.3 bits), Expect = 1.1e-114, Sum P(2) = 1.1e-114
Identities = 151/203 (74%), Positives = 175/203 (86%)
Query: 116 ENDEVDEPRN---LKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER 172
+N++ D+ N + P + ICSFAAAG+CPRG +CPH+HGD C TCGK+CLHPFRPEER
Sbjct: 86 DNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEER 145
Query: 173 EEHMKSCEKKQKHLEALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRN 232
EEH K CEKKQKH+EAL++SQ+IECSVCLDR+LSK T ERKFGLL+ECDHPFCI CIRN
Sbjct: 146 EEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRN 205
Query: 233 WRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKH 292
WRSS+P SGMDVN+ LRACPICRKLSYFV+PSV+WY +PEEK+EIID YK+KL+SIDCKH
Sbjct: 206 WRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKH 265
Query: 293 FNFGNGNCPFGTSCFYKHMVKPG 315
FNFGNGNCPFG SCFYKH G
Sbjct: 266 FNFGNGNCPFGASCFYKHAYSDG 288
Score = 264 (98.0 bits), Expect = 1.1e-114, Sum P(2) = 1.1e-114
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 1 MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
MS R+LCKFF HG+CLKGE+CEFSHD KDPPNN+CT+YQK C YGSRCRY+HV+
Sbjct: 1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR 55
>UNIPROTKB|G3V789 [details] [associations]
symbol:Mkrn1 "Protein Mkrn1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473959 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
OMA:YQRGCCA ProteinModelPortal:G3V789 Ensembl:ENSRNOT00000013124
Uniprot:G3V789
Length = 481
Score = 473 (171.6 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 84/207 (40%), Positives = 129/207 (62%)
Query: 114 SLENDEVD-EPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER 172
S+ +E + EP ++ ++ +C +AA G C GE C ++HGD+C CG Q LHP +R
Sbjct: 194 SVTKEESEKEPTTVE-TEKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQR 252
Query: 173 EEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCIS 228
+H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H +C+
Sbjct: 253 SQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLK 312
Query: 229 CIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSI 288
CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK + +
Sbjct: 313 CIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNK 368
Query: 289 DCKHFNFGNGNCPFGTSCFYKHMVKPG 315
C++F+ G G+CPFG +CFYKH G
Sbjct: 369 ACRYFDEGRGSCPFGGNCFYKHAYPDG 395
Score = 195 (73.7 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKP 111
>UNIPROTKB|Q9UHC7 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 Reactome:REACT_6900 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH236950 EMBL:CH471070
eggNOG:COG5084 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 KO:K15687 EMBL:AC069335 CTD:23608
HOVERGEN:HBG066965 OMA:YQRGCCA OrthoDB:EOG45DWPM EMBL:AF192784
EMBL:AF192793 EMBL:AF192789 EMBL:AF192790 EMBL:AF192791
EMBL:AF192792 EMBL:AM236048 EMBL:AF117233 EMBL:AL136812
EMBL:AK127030 EMBL:AK315552 EMBL:BC025955 EMBL:BC037400
EMBL:BC064838 EMBL:AB209298 IPI:IPI00033350 IPI:IPI00921845
IPI:IPI00946774 IPI:IPI00973591 RefSeq:NP_001138597.1
RefSeq:NP_038474.2 UniGene:Hs.741212 ProteinModelPortal:Q9UHC7
SMR:Q9UHC7 IntAct:Q9UHC7 MINT:MINT-1365598 STRING:Q9UHC7
PhosphoSite:Q9UHC7 DMDM:67477468 PRIDE:Q9UHC7 DNASU:23608
Ensembl:ENST00000255977 Ensembl:ENST00000443720
Ensembl:ENST00000474576 GeneID:23608 KEGG:hsa:23608 UCSC:uc003vvs.2
GeneCards:GC07M140152 HGNC:HGNC:7112 HPA:HPA000567 MIM:607754
neXtProt:NX_Q9UHC7 PharmGKB:PA30831 InParanoid:Q9UHC7
PhylomeDB:Q9UHC7 GenomeRNAi:23608 NextBio:46308 ArrayExpress:Q9UHC7
Bgee:Q9UHC7 CleanEx:HS_MKRN1 Genevestigator:Q9UHC7
GermOnline:ENSG00000133606 Uniprot:Q9UHC7
Length = 482
Score = 470 (170.5 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 83/212 (39%), Positives = 128/212 (60%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ +E ++ + + +C +AA G C GE C ++HGD+C CG Q LHP
Sbjct: 188 EAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPM 247
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H
Sbjct: 248 DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNH 307
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C+ CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK
Sbjct: 308 TYCLKCIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLILKYKE 363
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
+ + C++F+ G G+CPFG +CFYKH G
Sbjct: 364 AMSNKACRYFDEGRGSCPFGGNCFYKHAYPDG 395
Score = 196 (74.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP 111
Score = 37 (18.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 153 GDTCPTCGKQCLH-PFRPEEREEHMKSCE-KKQ 183
G T P+C + L EE E+ + E KKQ
Sbjct: 180 GRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQ 212
>UNIPROTKB|F1SRP7 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224 KO:K15687
CTD:23608 GeneTree:ENSGT00390000014093 OMA:YQRGCCA EMBL:CU655865
RefSeq:XP_003134656.1 UniGene:Ssc.10393 Ensembl:ENSSSCT00000017962
GeneID:100514261 KEGG:ssc:100514261 Uniprot:F1SRP7
Length = 482
Score = 470 (170.5 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 83/212 (39%), Positives = 126/212 (59%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ E ++ + + +C +AA G C GE C ++HGD C CG Q LHP
Sbjct: 188 EAPLQSSVTKQESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDPCDMCGLQVLHPV 247
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H
Sbjct: 248 DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNH 307
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C+ CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK
Sbjct: 308 TYCLKCIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKE 363
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
+ + C++F+ G G+CPFG +CFYKH G
Sbjct: 364 AMSNKACRYFDEGRGSCPFGGNCFYKHAYPDG 395
Score = 195 (73.7 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKP 111
>RGD|1310618 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:BC083870 IPI:IPI00372043
RefSeq:NP_001008315.1 UniGene:Rn.129070 Ensembl:ENSRNOT00000013146
GeneID:297525 KEGG:rno:297525 UCSC:RGD:1310618 InParanoid:Q5XI23
NextBio:642384 Genevestigator:Q5XI23 Uniprot:Q5XI23
Length = 417
Score = 463 (168.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 94/245 (38%), Positives = 138/245 (56%)
Query: 90 LSALSRPFLPPNKTAWNPESVCNDSLENDEV------DEPR----NLKPA-----DRSIC 134
L+ L+ PP T NP CND + E+ D R +L+ + ++ +C
Sbjct: 114 LTGLAEDKTPPPSTVNNPGG-CNDPQTSPEMKPHSYLDAIRTGLDDLEASSSYSNEQQLC 172
Query: 135 SFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE---ALR 190
+AAAG C G+ C ++HGD C C Q LHPF PE+R+ H K C +H +E A +
Sbjct: 173 PYAAAGECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAFAFQ 232
Query: 191 RSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRA 250
SQ+ CS+C++ +L K +A+ER+FG+LS C H +C+SCIR WR + N +++
Sbjct: 233 ASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFE----NPIIKS 288
Query: 251 CPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKH 310
CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+ C Y+H
Sbjct: 289 CPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRH 348
Query: 311 MVKPG 315
G
Sbjct: 349 AYPDG 353
Score = 200 (75.5 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H KP
Sbjct: 3 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 58
>MGI|MGI:1859353 [details] [associations]
symbol:Mkrn1 "makorin, ring finger protein, 1" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1859353 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003682 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 OrthoDB:EOG45DWPM
EMBL:AF192785 IPI:IPI00459256 IPI:IPI00850315 UniGene:Mm.270484
ProteinModelPortal:Q9QXP6 SMR:Q9QXP6 STRING:Q9QXP6
PhosphoSite:Q9QXP6 PaxDb:Q9QXP6 PRIDE:Q9QXP6
Ensembl:ENSMUST00000114822 InParanoid:Q9QXP6 ChiTaRS:MKRN1
Bgee:Q9QXP6 CleanEx:MM_MKRN1 Genevestigator:Q9QXP6
GermOnline:ENSMUSG00000029922 Uniprot:Q9QXP6
Length = 481
Score = 466 (169.1 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 83/207 (40%), Positives = 128/207 (61%)
Query: 114 SLENDEVD-EPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER 172
S+ +E + EP ++ + +C +AA G C GE C ++HGD+C CG Q LHP +R
Sbjct: 194 SVTKEESEKEPTTVE-TKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPVDAAQR 252
Query: 173 EEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCIS 228
+H+KSC E +K +E A++R++++ C +C++ V K +ER+FG+LS C+H +C+
Sbjct: 253 SQHIKSCIEAHEKDMELSFAVQRTKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLK 312
Query: 229 CIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSI 288
CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK + +
Sbjct: 313 CIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNK 368
Query: 289 DCKHFNFGNGNCPFGTSCFYKHMVKPG 315
C++F+ G G+CPFG +CFYKH G
Sbjct: 369 ACRYFDEGRGSCPFGGNCFYKHAYPDG 395
Score = 195 (73.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKP 111
>UNIPROTKB|E2RRA5 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:AAEX03010214 EMBL:AAEX03010213 Ensembl:ENSCAFT00000006351
Uniprot:E2RRA5
Length = 487
Score = 472 (171.2 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 82/206 (39%), Positives = 126/206 (61%)
Query: 114 SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEERE 173
S+ +E ++ + + +C +AA G C GE C ++HGD+C CG Q LHP +R
Sbjct: 199 SVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQRS 258
Query: 174 EHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISC 229
+H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H +C+ C
Sbjct: 259 QHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKC 318
Query: 230 IRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSID 289
IR WRS+ + +++CP CR S FVIPS W EEKQ++I YK + +
Sbjct: 319 IRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKA 374
Query: 290 CKHFNFGNGNCPFGTSCFYKHMVKPG 315
C++F+ G G+CPFG +CFYKH G
Sbjct: 375 CRYFDEGRGSCPFGGNCFYKHAYPDG 400
Score = 188 (71.2 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 7 CKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
CK+F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 66 CKYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKP 116
Score = 68 (29.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C + H
Sbjct: 93 VVCKYFQRGYCIYGDRCRYEH 113
>UNIPROTKB|Q9PTI4 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5084 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 HOGENOM:HOG000252976 KO:K15687
CTD:23608 GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965
OMA:YQRGCCA OrthoDB:EOG45DWPM EMBL:AADN02006362 EMBL:AADN02006363
EMBL:AF192787 IPI:IPI00595405 RefSeq:NP_990073.1 UniGene:Gga.1197
Ensembl:ENSGALT00000020962 GeneID:395500 KEGG:gga:395500
InParanoid:Q9PTI4 NextBio:20815579 Uniprot:Q9PTI4
Length = 464
Score = 479 (173.7 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 88/212 (41%), Positives = 127/212 (59%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E V + E E DE +K + +C +AA G C GE C +IHGD C CG Q LHP
Sbjct: 183 EMVIEEEYEKQEADE--EMK---KQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPI 237
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H
Sbjct: 238 DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNH 297
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C+ CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK
Sbjct: 298 TYCLKCIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKE 353
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
+ + C++F+ G G+CPFG +CFYKH G
Sbjct: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDG 385
Score = 179 (68.1 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G++C +SHD + +C YYQ+G C+YG CRYEH KP
Sbjct: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
Score = 49 (22.3 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 24/87 (27%), Positives = 38/87 (43%)
Query: 100 PNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTC 159
P+ A PE+V D +E + DE +L A + A G+ P+ G P+C
Sbjct: 122 PSDLALLPETVEEDIIEIE--DENIDLAAAGVGAEDWVNAVEFVPGQ--PYC-GRAAPSC 176
Query: 160 GKQCLHPFRPEEREEHMKSCEKKQKHL 186
+ L EE E ++ E+ +K L
Sbjct: 177 TEVPLEEMVIEEEYEKQEADEEMKKQL 203
>MGI|MGI:1914277 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1914277 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466523 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AF277171 EMBL:AK011295
EMBL:AK077926 EMBL:BC025547 IPI:IPI00620251 RefSeq:NP_075779.2
UniGene:Mm.101316 ProteinModelPortal:Q9ERV1 SMR:Q9ERV1
PhosphoSite:Q9ERV1 PRIDE:Q9ERV1 Ensembl:ENSMUST00000000449
GeneID:67027 KEGG:mmu:67027 InParanoid:Q6GTY9 NextBio:323348
Bgee:Q9ERV1 CleanEx:MM_MKRN2 Genevestigator:Q9ERV1
GermOnline:ENSMUSG00000000439 Uniprot:Q9ERV1
Length = 416
Score = 455 (165.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 80/187 (42%), Positives = 115/187 (61%)
Query: 133 ICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE---A 188
+C +AAAG C G+ C ++HGD C C Q LHPF PE+R+ H K C +H +E A
Sbjct: 170 LCPYAAAGECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAFA 229
Query: 189 LRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTAL 248
+ SQ+ CS+C++ +L K +A+ER+FG+LS C H +C+SCIR WR + N +
Sbjct: 230 FQASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFE----NPII 285
Query: 249 RACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFY 308
++CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+ C Y
Sbjct: 286 KSCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLY 345
Query: 309 KHMVKPG 315
+H G
Sbjct: 346 RHAYPDG 352
Score = 200 (75.5 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H KP
Sbjct: 3 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 58
Score = 56 (24.8 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 22 EFSHDWKDPPNNICTYYQKGFCSYGSRCRYEH 53
E S + + P +C Y G C +G C Y H
Sbjct: 159 EASSSYSNEPQ-LCPYAAAGECRFGDACVYLH 189
>UNIPROTKB|F1MF12 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000010932 ArrayExpress:F1MF12 Uniprot:F1MF12
Length = 480
Score = 473 (171.6 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 82/212 (38%), Positives = 128/212 (60%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ ++ ++ ++ + +C +AA G C GE C ++HGD C CG Q LHP
Sbjct: 187 EAPLQGSVTKEDAEKEQSAVETKKQLCPYAAVGECRYGENCAYLHGDACDMCGLQVLHPV 246
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H
Sbjct: 247 DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNH 306
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C+ CIR WRS+ + +++CP CR S FVIPS W EEKQ++I YK
Sbjct: 307 TYCLKCIRKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKE 362
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
+ + C++F+ G G+CPFG +CFYKH G
Sbjct: 363 AMSNKACRYFDEGRGSCPFGGNCFYKHAYPDG 394
Score = 180 (68.4 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 7 CKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
C +F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 61 CWYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKP 111
Score = 68 (29.0 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C + H
Sbjct: 88 VVCKYFQRGYCIYGDRCRYEH 108
>UNIPROTKB|E2REH2 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AAEX03012060
Ensembl:ENSCAFT00000007980 Uniprot:E2REH2
Length = 416
Score = 455 (165.2 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 85/220 (38%), Positives = 129/220 (58%)
Query: 101 NKTAWNPESVCNDSLENDEVD-EPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTC 159
N P S D++ + D E + +++ +C +AAAG C G+ C ++HG+ C C
Sbjct: 138 NSPEMKPHSYL-DAIRSGLDDLEASSSYSSEQQLCPYAAAGECRFGDACVYLHGEVCEIC 196
Query: 160 GKQCLHPFRPEEREEHMKSCEKKQKH-LE---ALRRSQEIECSVCLDRVLSKPTAAERKF 215
+ LHPF PE+R+ H K C +H +E A + SQ+ CS+C++ VL K +A+ER+F
Sbjct: 197 RLRVLHPFDPEQRKAHEKICMSTFEHEMEKAFAFQASQDKVCSICMEVVLEKASASERRF 256
Query: 216 GLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQ 275
G+LS C+H +C+SCIR WR + N +++CP CR +S FVIPSV W +K
Sbjct: 257 GILSNCNHTYCLSCIRQWRCAKQFE----NPIIKSCPECRVISEFVIPSVYWVEDQNKKN 312
Query: 276 EIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
E+I+++K + CK+F G G CPFG+ C Y+H G
Sbjct: 313 ELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDG 352
Score = 197 (74.4 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H +P
Sbjct: 3 TKQVTCRYFMHGVCREGNQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 58
>UNIPROTKB|F1M3I4 [details] [associations]
symbol:Mkrn2 "Protein Mkrn2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 InterPro:IPR026293
PANTHER:PTHR11224:SF17 IPI:IPI00566412 Ensembl:ENSRNOT00000044916
ArrayExpress:F1M3I4 Uniprot:F1M3I4
Length = 417
Score = 463 (168.0 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 94/245 (38%), Positives = 138/245 (56%)
Query: 90 LSALSRPFLPPNKTAWNPESVCNDSLENDEV------DEPR----NLKPA-----DRSIC 134
L+ L+ PP T NP CND + E+ D R +L+ + ++ +C
Sbjct: 114 LTGLAEDKTPPPSTVNNPGG-CNDPQTSPEMKPHSYLDAIRTGLDDLEASSSYSNEQQLC 172
Query: 135 SFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE---ALR 190
+AAAG C G+ C ++HGD C C Q LHPF PE+R+ H K C +H +E A +
Sbjct: 173 PYAAAGECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAFAFQ 232
Query: 191 RSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRA 250
SQ+ CS+C++ +L K +A+ER+FG+LS C H +C+SCIR WR + N +++
Sbjct: 233 ASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFE----NPIIKS 288
Query: 251 CPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKH 310
CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+ C Y+H
Sbjct: 289 CPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRH 348
Query: 311 MVKPG 315
G
Sbjct: 349 AYPDG 353
Score = 186 (70.5 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K V ++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H KP
Sbjct: 3 TKLVSVRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 58
>UNIPROTKB|Q9H000 [details] [associations]
symbol:MKRN2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 EMBL:CH471055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 HOVERGEN:HBG066965 CTD:23609
OrthoDB:EOG4229K2 InterPro:IPR026293 PANTHER:PTHR11224:SF17
EMBL:AF302084 EMBL:AF277170 EMBL:AF277164 EMBL:AF277165
EMBL:AF277166 EMBL:AF277167 EMBL:AF277168 EMBL:AF277169
EMBL:AF161555 EMBL:AK091318 EMBL:AC018500 EMBL:BC001799
EMBL:BC015715 EMBL:AL834512 IPI:IPI00396406 RefSeq:NP_054879.3
UniGene:Hs.591666 ProteinModelPortal:Q9H000 SMR:Q9H000
IntAct:Q9H000 STRING:Q9H000 PhosphoSite:Q9H000 DMDM:45645205
PRIDE:Q9H000 DNASU:23609 Ensembl:ENST00000170447 GeneID:23609
KEGG:hsa:23609 UCSC:uc003bxd.3 GeneCards:GC03P012598 HGNC:HGNC:7113
HPA:HPA037559 HPA:HPA037560 MIM:608426 neXtProt:NX_Q9H000
PharmGKB:PA30832 InParanoid:Q9H000 OMA:KGYCAYG ChiTaRS:MKRN2
GenomeRNAi:23609 NextBio:46312 ArrayExpress:Q9H000 Bgee:Q9H000
CleanEx:HS_MKRN2 Genevestigator:Q9H000 GermOnline:ENSG00000075975
Uniprot:Q9H000
Length = 416
Score = 453 (164.5 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 79/190 (41%), Positives = 118/190 (62%)
Query: 130 DRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE- 187
++ +C +AAAG C G+ C ++HG+ C C Q LHPF PE+R+ H K C +H +E
Sbjct: 167 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 226
Query: 188 --ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVN 245
A + SQ+ CS+C++ +L K +A+ER+FG+LS C+H +C+SCIR WR + N
Sbjct: 227 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFE----N 282
Query: 246 TALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTS 305
+++CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+
Sbjct: 283 PIIKSCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSK 342
Query: 306 CFYKHMVKPG 315
C Y+H G
Sbjct: 343 CLYRHAYPDG 352
Score = 196 (74.1 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K++ C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H +P
Sbjct: 3 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 58
>UNIPROTKB|Q6GLD9 [details] [associations]
symbol:mkrn2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:8364 "Xenopus (Silurana) tropicalis" [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0009790 "embryo
development" evidence=ISS] [GO:0009798 "axis specification"
evidence=ISS] [GO:0014065 "phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0050768
"negative regulation of neurogenesis" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0014065 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003676 GO:GO:0016567
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0043491
eggNOG:COG5084 GO:GO:0009798 GO:GO:0050768 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 HOGENOM:HOG000252976 KO:K15687
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 EMBL:BC074559 RefSeq:NP_001005447.1
UniGene:Str.24743 ProteinModelPortal:Q6GLD9 GeneID:448038
KEGG:xtr:448038 Xenbase:XB-GENE-5879487 InParanoid:Q6GLD9
Uniprot:Q6GLD9
Length = 418
Score = 449 (163.1 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 83/213 (38%), Positives = 119/213 (55%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E++C DE P A + +C FA AG C GE CP+IHG+ C CG Q LHP+
Sbjct: 147 EAICTGL---DETPIPSAYPDAPQQLCPFAQAGGCHYGESCPYIHGNVCEICGLQVLHPY 203
Query: 168 RPEEREEHMKSC----EKKQKHLEALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
E+R H K C E+ + A + S+ CS+C++RV K + +ER+FG+LS C H
Sbjct: 204 DQEQRGHHEKLCMANFERDMERAFAFQASEGKVCSICMERVYDKQSPSERRFGILSNCHH 263
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C++CIR WR + N +++CP CR +S FVIPS W +K E+I+++K
Sbjct: 264 TYCLACIRQWRCARQFE----NPVIKSCPECRVISEFVIPSAYWVEDQSKKFELIEAFKQ 319
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPGS 316
+ CK+F+ G G CPFG C Y H G+
Sbjct: 320 GMGKKACKYFDQGRGTCPFGGKCLYLHAYPDGT 352
Score = 186 (70.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKP 56
+K V C++F HG C +G C FSHD P+ +C +YQ+G C+YG+RCRY+HVKP
Sbjct: 3 TKHVTCRYFLHGVCREGGRCLFSHDLATSKPSTVCRFYQRGQCAYGARCRYDHVKP 58
>ZFIN|ZDB-GENE-020213-2 [details] [associations]
symbol:mkrn2 "makorin, ring finger protein, 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-020213-2 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006351 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 EMBL:AF277172 EMBL:BC065352 IPI:IPI00493411
RefSeq:NP_694511.1 UniGene:Dr.77762 STRING:Q9DFG8
Ensembl:ENSDART00000019997 Ensembl:ENSDART00000130504 GeneID:170783
KEGG:dre:170783 CTD:23609 OrthoDB:EOG4229K2 NextBio:20797101
ArrayExpress:Q9DFG8 Bgee:Q9DFG8 InterPro:IPR026293
PANTHER:PTHR11224:SF17 Uniprot:Q9DFG8
Length = 414
Score = 440 (159.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 80/194 (41%), Positives = 110/194 (56%)
Query: 126 LKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSC----EK 181
L+ IC F AAG C GE CP++HG+ C C + LHP PE+R H K C E
Sbjct: 162 LQQTSPQICPFLAAGQCQYGESCPYLHGEMCEICRQHVLHPHDPEQRAAHEKKCMVAFEM 221
Query: 182 KQKHLEALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSG 241
+ A+++SQ+ C +CLD V K + +ER+FG+LS C H +C++CIR WR
Sbjct: 222 DMERAFAVQQSQDKVCKICLDVVYEKSSPSERRFGILSSCAHTYCLNCIRQWRCVEQLH- 280
Query: 242 MDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCP 301
N ++CP CR +S FVIPS+ W E+K +I+ +KS + CK+F+ G G CP
Sbjct: 281 ---NQIRKSCPECRVVSEFVIPSIYWVEDQEQKNLLIEEFKSGVSKKACKYFDQGRGTCP 337
Query: 302 FGTSCFYKHMVKPG 315
FG CFY H G
Sbjct: 338 FGGKCFYMHAYADG 351
Score = 193 (73.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F HG C +G C FSHD P+ IC YYQ+G C+YG RCRY+H+KP
Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKP 58
>ZFIN|ZDB-GENE-020213-1 [details] [associations]
symbol:mkrn1 "makorin, ring finger protein, 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-020213-1
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 HSSP:P47974 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 EMBL:CR792454 EMBL:CT826375
EMBL:BC095243 EMBL:AF277173 IPI:IPI00639757 RefSeq:NP_694510.1
UniGene:Dr.78561 ProteinModelPortal:Q4VBT5 STRING:Q4VBT5
Ensembl:ENSDART00000061070 GeneID:170782 KEGG:dre:170782 CTD:23608
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 InParanoid:Q4VBT5
OMA:YQRGCCA OrthoDB:EOG45DWPM NextBio:20797100 Bgee:Q4VBT5
Uniprot:Q4VBT5
Length = 439
Score = 454 (164.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 81/205 (39%), Positives = 122/205 (59%)
Query: 115 LENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREE 174
L +E ++ + K + +C +AA G C G C ++HGD C CG Q LHP +R +
Sbjct: 150 LIEEEYEKEQANKEMKKQLCPYAAVGECRYGLNCAYLHGDVCDMCGLQVLHPSDTSQRSQ 209
Query: 175 HMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCI 230
H+++C E +K +E A++RS+++ C VC++ V K +ER+FG+LS C H +C+ CI
Sbjct: 210 HIRACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCI 269
Query: 231 RNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDC 290
R WRS+ + +++CP CR S FVIPS W EEKQ++I YK + + C
Sbjct: 270 RKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWVEDKEEKQQLIQKYKDGMGTKPC 325
Query: 291 KHFNFGNGNCPFGTSCFYKHMVKPG 315
++F+ G G CPFG +CFYKH G
Sbjct: 326 RYFDEGRGTCPFGANCFYKHAFPDG 350
Score = 178 (67.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVKP 56
+K V C++F HG C +GE+C +SHD IC ++QKG C++G RCRYEH KP
Sbjct: 19 TKHVTCRYFMHGLCKEGENCRYSHDLSSCKQTMICKFFQKGCCAFGDRCRYEHTKP 74
>UNIPROTKB|Q13434 [details] [associations]
symbol:MKRN4P "Putative E3 ubiquitin-protein ligase
makorin-4" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOVERGEN:HBG066965 HPA:HPA000567 EMBL:U41315 IPI:IPI00006148
ProteinModelPortal:Q13434 SMR:Q13434 DMDM:17368441 PRIDE:Q13434
GeneCards:GC0XP040694 HGNC:HGNC:7115 neXtProt:NX_Q13434
PharmGKB:PA30834 Genevestigator:Q13434 GermOnline:ENSG00000197639
Uniprot:Q13434
Length = 485
Score = 469 (170.2 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 85/212 (40%), Positives = 124/212 (58%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ +E +E + + +C +AA G C GE C ++HGD C CG Q LHP
Sbjct: 223 EAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLHGDLCDMCGLQVLHPM 282
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+++C E +K +E A++RS++ C +C++ V K E +FG+LS C+H
Sbjct: 283 DAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKANPNEHRFGILSNCNH 342
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
FC+ CIR WRS+ V ++CP CR S FVIPS W EEKQ++I YK
Sbjct: 343 TFCLKCIRKWRSAKEFESRIV----KSCPQCRITSNFVIPSEYWVEEKEEKQKLIQKYKE 398
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
+ + CK+F+ G G+CPFG +CFYKHM G
Sbjct: 399 AMSNKACKYFDEGRGSCPFGENCFYKHMYPDG 430
Score = 162 (62.1 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+K+V C++F +G C +G++C +SHD D + C Y+Q+G C YG RCR EH KP
Sbjct: 91 TKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKP 146
>UNIPROTKB|B0F0H3 [details] [associations]
symbol:mkrn2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:8355 "Xenopus laevis" [GO:0005622
"intracellular" evidence=IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0009798 "axis specification" evidence=IMP]
[GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IMP]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=IMP] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0014065 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0043491
GO:GO:0009798 GO:GO:0050768 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 KO:K15687 HOVERGEN:HBG066965 InterPro:IPR026293
PANTHER:PTHR11224:SF17 EMBL:EF626804 RefSeq:NP_001116070.1
UniGene:Xl.76333 GeneID:100141485 KEGG:xla:100141485 Uniprot:B0F0H3
Length = 409
Score = 451 (163.8 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 83/213 (38%), Positives = 125/213 (58%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E++C DE +P + A + +C FA AG C G+ CP++HGD C CG Q LHP
Sbjct: 140 EAICTGL---DESQDPASYPGAPQQLCPFAQAGECHCGDSCPYLHGDACEICGLQVLHPH 196
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
E+R +H K C E + +E A++ S+ CS+C++RV K + A+R+F +LS+C+H
Sbjct: 197 DQEQRRDHEKLCMENFELDMERAFAVQASEGRVCSICMERVYEKQSPAQRRFRILSDCNH 256
Query: 224 PFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKS 283
+C++CIR WR + D N +++CP CR +S FVIPS W +K E+I+++K
Sbjct: 257 TYCLTCIRQWRCARQ---FD-NPVIKSCPECRVISEFVIPSAYWVEDQSKKDELIEAFKQ 312
Query: 284 KLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPGS 316
+ CK+F+ G G CPFG C Y H G+
Sbjct: 313 GMGKKLCKYFDQGRGTCPFGGKCLYLHSYPDGT 345
Score = 177 (67.4 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKP 56
K+V C++F HG C +G C FSHD P+ +C ++ +G C+YG+RCRY+HVKP
Sbjct: 4 KQVTCRYFLHGVCREGSRCLFSHDLATSKPSTVCRFFLRGQCAYGTRCRYDHVKP 58
Score = 61 (26.5 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 30 PPNNICTYYQKGFCSYGSRCRYEH 53
P C Y+ G C GSRC + H
Sbjct: 3 PKQVTCRYFLHGVCREGSRCLFSH 26
>UNIPROTKB|C9J494 [details] [associations]
symbol:MKRN2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 HOGENOM:HOG000252976
InterPro:IPR026293 PANTHER:PTHR11224:SF17 EMBL:AC018500
HGNC:HGNC:7113 ChiTaRS:MKRN2 IPI:IPI00927618
ProteinModelPortal:C9J494 SMR:C9J494 STRING:C9J494
Ensembl:ENST00000448482 ArrayExpress:C9J494 Bgee:C9J494
Uniprot:C9J494
Length = 414
Score = 453 (164.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 79/190 (41%), Positives = 118/190 (62%)
Query: 130 DRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE- 187
++ +C +AAAG C G+ C ++HG+ C C Q LHPF PE+R+ H K C +H +E
Sbjct: 165 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 224
Query: 188 --ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVN 245
A + SQ+ CS+C++ +L K +A+ER+FG+LS C+H +C+SCIR WR + N
Sbjct: 225 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFE----N 280
Query: 246 TALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTS 305
+++CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+
Sbjct: 281 PIIKSCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSK 340
Query: 306 CFYKHMVKPG 315
C Y+H G
Sbjct: 341 CLYRHAYPDG 350
Score = 171 (65.3 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
+K++ C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+R Y+H +P
Sbjct: 3 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTR--YDHTRP 56
>UNIPROTKB|J9P921 [details] [associations]
symbol:J9P921 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 EMBL:AAEX03015407
Ensembl:ENSCAFT00000011674 OMA:CAFCERQ Uniprot:J9P921
Length = 419
Score = 452 (164.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 80/206 (38%), Positives = 125/206 (60%)
Query: 114 SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEERE 173
S+ +E ++ + + +C +AA G C GE C ++HGD+C CG Q LHP +R
Sbjct: 132 SVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQRS 191
Query: 174 EHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISC 229
+H+KSC E +K +E A++RS+++ C +C++ V K ++ER+FG+LS C+H +C C
Sbjct: 192 QHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANSSERRFGILSNCNHTYCPHC 251
Query: 230 IRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSID 289
I WRS+ + +++CP CR S FVIPS W EEKQ++I +K + +
Sbjct: 252 IHKWRSAKQFE----SKIIKSCPECRITSNFVIPSEYWV-EKEEKQKLIQKFKEAMSNKA 306
Query: 290 CKHFNFGNGNCPFGTSCFYKHMVKPG 315
C++F+ G G+CPFG +CFYKH G
Sbjct: 307 CRYFDEGRGSCPFGGNCFYKHAYPDG 332
Score = 169 (64.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 8 KFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
++F HG C +G++C +SHD D P + C Y+Q+G+C YG CRYEH KP
Sbjct: 1 RYFIHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDPCRYEHSKP 50
Score = 66 (28.3 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C + H
Sbjct: 27 VVCKYFQRGYCIYGDPCRYEH 47
>UNIPROTKB|F1NI93 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AADN02013930
IPI:IPI00584461 Ensembl:ENSGALT00000007996 Uniprot:F1NI93
Length = 417
Score = 448 (162.8 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 80/188 (42%), Positives = 115/188 (61%)
Query: 133 ICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE---A 188
+C +AAAG C G++C ++HGD C CG Q LHPF E+R+ H C +H +E A
Sbjct: 169 LCPYAAAGACHFGDRCLYLHGDVCEICGLQVLHPFDQEQRKAHEMMCMATFEHEMEKAFA 228
Query: 189 LRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTAL 248
+ SQ+ CS+C++ V KP+A+ER+FG+LS C+H +C+SCIR WR + N +
Sbjct: 229 FQASQDKVCSICMEVVYEKPSASERRFGILSNCNHTYCLSCIRQWRCAKQFE----NPII 284
Query: 249 RACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFY 308
++CP CR +S FVIPS W E+K E+I+++K + CK+F G G CPFG C Y
Sbjct: 285 KSCPECRVISEFVIPSAYWVEDQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLY 344
Query: 309 KHMVKPGS 316
H G+
Sbjct: 345 FHAYPDGT 352
Score = 168 (64.2 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVK 55
+K+V C+++ G C +G C FSHD ++ +C YYQKG C+YG+RCRY+H++
Sbjct: 3 TKQVTCRYYVQGVCREGSKCLFSHDLSSSKSSTVCKYYQKGQCAYGARCRYDHIR 57
>UNIPROTKB|I3LPL9 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:FP236289
Ensembl:ENSSSCT00000028409 Uniprot:I3LPL9
Length = 415
Score = 466 (169.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 85/221 (38%), Positives = 131/221 (59%)
Query: 100 PNKTAWNPESVCNDSLENDEVD-EPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPT 158
PN P S D++ + D E + +++ +C +AAAG C G+ C ++HG+ C
Sbjct: 136 PNSPEMKPHSYL-DAIRSGLDDLEASSSYSSEQQLCPYAAAGECRFGDACVYLHGEVCEI 194
Query: 159 CGKQCLHPFRPEEREEHMKSCEKKQKH-LE---ALRRSQEIECSVCLDRVLSKPTAAERK 214
C + LHPF PE+R+ H K+C +H +E A + SQ+ CS+C++ +L K +A+ER+
Sbjct: 195 CRLRVLHPFNPEQRKAHEKTCMSTFEHEMEKAFAFQASQDKVCSICMEVILEKASASERR 254
Query: 215 FGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEK 274
FG+LS C+H +C+SCIR WR + N +++CP CR +S FVIPSV W +K
Sbjct: 255 FGILSNCNHTYCLSCIRQWRCAKQFE----NPIIKSCPECRVISEFVIPSVYWVEDQNKK 310
Query: 275 QEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
E+I+++K + CK+F G G CPFG+ C Y+H G
Sbjct: 311 NELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDG 351
Score = 114 (45.2 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKP 56
LC+ F HG C +G C FSHD + P+ + +G+CS G Y+H +P
Sbjct: 7 LCRDFMHGVCREGNQCLFSHDLANSKPSTXLRVFLRGWCSGGKSNTYDHTRP 58
Score = 46 (21.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 99 PPNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCP 143
PP+ TA S+ +L E R L DR++ A CP
Sbjct: 83 PPDLTA----SIVKTNLHEPGKREKRTLVLRDRNLSGLAEEKTCP 123
Score = 41 (19.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 23/81 (28%), Positives = 33/81 (40%)
Query: 132 SICSFAAAGNCPRGEKCPHIHG----DTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLE 187
S S A G P G P H D + K LH P +RE+ ++ + ++L
Sbjct: 59 SAASGGAVGTGPHGVPSPAFHSPHPPDLTASIVKTNLH--EPGKREK--RTLVLRDRNLS 114
Query: 188 ALRRSQEIECSVCLDRVLSKP 208
L ++E C VLS P
Sbjct: 115 GL--AEEKTCP----SVLSNP 129
>UNIPROTKB|Q13064 [details] [associations]
symbol:MKRN3 "Probable E3 ubiquitin-protein ligase
makorin-3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0003676 GO:GO:0016567 GO:GO:0030529 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 eggNOG:NOG268458 HOGENOM:HOG000252976 KO:K15687
HOVERGEN:HBG066965 EMBL:U19107 EMBL:BC044639 IPI:IPI00024229
PIR:G01614 RefSeq:NP_005655.1 UniGene:Hs.679587 UniGene:Hs.72964
ProteinModelPortal:Q13064 SMR:Q13064 IntAct:Q13064 STRING:Q13064
PhosphoSite:Q13064 DMDM:17368438 PaxDb:Q13064 PeptideAtlas:Q13064
PRIDE:Q13064 DNASU:7681 Ensembl:ENST00000314520 GeneID:7681
KEGG:hsa:7681 UCSC:uc001ywh.4 CTD:7681 GeneCards:GC15P023810
HGNC:HGNC:7114 HPA:HPA029494 MIM:603856 neXtProt:NX_Q13064
PharmGKB:PA30833 InParanoid:Q13064 OMA:HGQCKEG OrthoDB:EOG4QRH4M
PhylomeDB:Q13064 ChiTaRS:MKRN3 GenomeRNAi:7681 NextBio:29794
ArrayExpress:Q13064 Bgee:Q13064 CleanEx:HS_MKRN3
Genevestigator:Q13064 GermOnline:ENSG00000179455 InterPro:IPR026294
PANTHER:PTHR11224:SF16 Uniprot:Q13064
Length = 507
Score = 460 (167.0 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 89/225 (39%), Positives = 126/225 (56%)
Query: 97 FLP--PNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGD 154
F+P P + W S L++ E + + + C +A+ G C RGE C ++HGD
Sbjct: 206 FVPGQPYRGRW-VASAPEAPLQSSETERKQMAVGSGLRFCYYASRGVCFRGESCMYLHGD 264
Query: 155 TCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTA 210
C CG Q LHP +REEHM++C E +K +E A++R + C +C++ V K
Sbjct: 265 ICDMCGLQTLHPMDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANP 324
Query: 211 AERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYT 270
+R+FG+LS C+H FCI CIR WRS+ N +++CP CR S VIPS W
Sbjct: 325 NDRRFGILSNCNHSFCIRCIRRWRSARQFE----NRIVKSCPQCRVTSELVIPSEFWVEE 380
Query: 271 PEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
EEKQ++I YK + + C++F G GNCPFG +CFYKH G
Sbjct: 381 EEEKQKLIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEG 425
Score = 91 (37.1 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 11/25 (44%), Positives = 21/25 (84%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHD 26
+K+++C+++ HG C +GE+C +SHD
Sbjct: 96 TKQIICRYYIHGQCKEGENCRYSHD 120
Score = 67 (28.6 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
IC YY G C G CRY H
Sbjct: 100 ICRYYIHGQCKEGENCRYSH 119
>UNIPROTKB|J9P9K3 [details] [associations]
symbol:MKRN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 OMA:HGQCKEG InterPro:IPR026294
PANTHER:PTHR11224:SF16 EMBL:AAEX03002201 Ensembl:ENSCAFT00000016105
Uniprot:J9P9K3
Length = 482
Score = 431 (156.8 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 83/220 (37%), Positives = 125/220 (56%)
Query: 97 FLP--PNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGD 154
F+P P + P SV S+++ + + + + +C AA G C RGE C ++HG+
Sbjct: 188 FVPGQPYRGRMIP-SVPRASVQSPVTEREQIAVGSGQQLCRDAAMGQCFRGESCMYVHGE 246
Query: 155 TCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTA 210
C CG Q LHP +R +H+K+C E +K +E A++RS + C +C++ V K
Sbjct: 247 ICDMCGLQVLHPVDAAQRADHIKACIEAHEKDMELSFAVQRSMDKVCGICMEVVYEKANP 306
Query: 211 AERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYT 270
++ +FG+LS C H +C+ CIR WR+ N +++CP CR S FVIPS W
Sbjct: 307 SDCRFGILSNCTHTYCLRCIRRWRTDKQFG----NRIVKSCPQCRVTSNFVIPSEFWVEE 362
Query: 271 PEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKH 310
EEKQ++I YK + + C++F G G CPFG +CFYKH
Sbjct: 363 EEEKQKLIQQYKEAMSNKTCRYFAGGRGFCPFGDNCFYKH 402
Score = 92 (37.4 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHD 26
+K+V C++F HG C +GE+C +SHD
Sbjct: 78 TKQVTCRYFLHGLCKEGENCRYSHD 102
Score = 70 (29.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 32 NNICTYYQ--KGFCSYGSRCRYEHVKP 56
N C Y+ +GFC +G C Y+H P
Sbjct: 379 NKTCRYFAGGRGFCPFGDNCFYKHADP 405
Score = 63 (27.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 35 CTYYQKGFCSYGSRCRYEH 53
C Y+ G C G CRY H
Sbjct: 83 CRYFLHGLCKEGENCRYSH 101
>MGI|MGI:2181178 [details] [associations]
symbol:Mkrn3 "makorin, ring finger protein, 3" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:2181178 Prosite:PS00518 CleanEx:MM_MKRN3 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 eggNOG:NOG268458
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:7681 OMA:HGQCKEG OrthoDB:EOG4QRH4M
InterPro:IPR026294 PANTHER:PTHR11224:SF16 EMBL:U19106 EMBL:AK134870
EMBL:BC054771 IPI:IPI00120262 RefSeq:NP_035876.2 UniGene:Mm.146
ProteinModelPortal:Q60764 SMR:Q60764 STRING:Q60764
PhosphoSite:Q60764 PRIDE:Q60764 Ensembl:ENSMUST00000094340
GeneID:22652 KEGG:mmu:22652 InParanoid:Q3UY92 NextBio:303059
Bgee:Q60764 Genevestigator:Q60764 GermOnline:ENSMUSG00000070527
Uniprot:Q60764
Length = 544
Score = 422 (153.6 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 74/192 (38%), Positives = 114/192 (59%)
Query: 128 PADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHL 186
P +C +AA G C RG++C + HG+ C CG+Q LHP+ ++E H ++C E ++ +
Sbjct: 274 PMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEAHERDM 333
Query: 187 E---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMD 243
E A++RS + C +C++ V K ++R+FG+L C+H +C+ CIR WRS++
Sbjct: 334 ELSFAVQRSMDKVCGICMEVVYEKADPSDRRFGILFSCNHTYCLRCIRRWRSATQFE--- 390
Query: 244 VNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFG 303
N ++CP CR S FVIPS W EEK++++ YK + C++F G G+CPFG
Sbjct: 391 -NRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPFG 449
Query: 304 TSCFYKHMVKPG 315
CFYKH G
Sbjct: 450 EFCFYKHEYPEG 461
Score = 90 (36.7 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 11/25 (44%), Positives = 21/25 (84%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHD 26
+K++LC+++ HG C +G++C +SHD
Sbjct: 93 TKQILCRYYLHGQCKEGDNCRYSHD 117
Score = 66 (28.3 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
+C YY G C G CRY H
Sbjct: 97 LCRYYLHGQCKEGDNCRYSH 116
>RGD|1311197 [details] [associations]
symbol:Mkrn3 "makorin, ring finger protein, 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000571 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1311197
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
OrthoDB:EOG4QRH4M InterPro:IPR026294 PANTHER:PTHR11224:SF16
IPI:IPI00958524 Ensembl:ENSRNOT00000013551 UCSC:RGD:1311197
Uniprot:D3ZY41
Length = 523
Score = 421 (153.3 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 73/187 (39%), Positives = 113/187 (60%)
Query: 133 ICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE---A 188
+C +AA G C RG++C + HG+ C CG+Q LHP+ ++E H ++C E ++ +E A
Sbjct: 258 LCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEAHERDMELSFA 317
Query: 189 LRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTAL 248
++RS + C +C++ V K ++R+FG+L C+H +C+ CIR WRS++ N
Sbjct: 318 VQRSMDKVCGICMEVVYEKADPSDRRFGILFSCNHTYCLKCIRRWRSATQFE----NRIS 373
Query: 249 RACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFY 308
++CP CR S FVIPS W EEK++++ YK + C++F G G+CPFG CFY
Sbjct: 374 KSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFY 433
Query: 309 KHMVKPG 315
KH G
Sbjct: 434 KHEYPEG 440
Score = 90 (36.7 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 11/25 (44%), Positives = 21/25 (84%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHD 26
+K++LC+++ HG C +G++C +SHD
Sbjct: 88 TKQILCRYYLHGQCKEGDNCRYSHD 112
Score = 66 (28.3 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
+C YY G C G CRY H
Sbjct: 92 LCRYYLHGQCKEGDNCRYSH 111
>UNIPROTKB|I3LLV1 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 EMBL:FP236289 Ensembl:ENSSSCT00000028617
Uniprot:I3LLV1
Length = 372
Score = 466 (169.1 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 85/221 (38%), Positives = 131/221 (59%)
Query: 100 PNKTAWNPESVCNDSLENDEVD-EPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPT 158
PN P S D++ + D E + +++ +C +AAAG C G+ C ++HG+ C
Sbjct: 93 PNSPEMKPHSYL-DAIRSGLDDLEASSSYSSEQQLCPYAAAGECRFGDACVYLHGEVCEI 151
Query: 159 CGKQCLHPFRPEEREEHMKSCEKKQKH-LE---ALRRSQEIECSVCLDRVLSKPTAAERK 214
C + LHPF PE+R+ H K+C +H +E A + SQ+ CS+C++ +L K +A+ER+
Sbjct: 152 CRLRVLHPFNPEQRKAHEKTCMSTFEHEMEKAFAFQASQDKVCSICMEVILEKASASERR 211
Query: 215 FGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEK 274
FG+LS C+H +C+SCIR WR + N +++CP CR +S FVIPSV W +K
Sbjct: 212 FGILSNCNHTYCLSCIRQWRCAKQFE----NPIIKSCPECRVISEFVIPSVYWVEDQNKK 267
Query: 275 QEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
E+I+++K + CK+F G G CPFG+ C Y+H G
Sbjct: 268 NELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDG 308
Score = 40 (19.1 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 49 CRYEHVKP 56
CRY+H +P
Sbjct: 8 CRYDHTRP 15
>UNIPROTKB|B4DPR4 [details] [associations]
symbol:MKRN2 "cDNA FLJ52346, highly similar to Makorin-2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
Prosite:PS00518 EMBL:CH471055 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 HOVERGEN:HBG066965 InterPro:IPR026293
PANTHER:PTHR11224:SF17 EMBL:AC018500 UniGene:Hs.591666 GeneID:23609
HGNC:HGNC:7113 ChiTaRS:MKRN2 EMBL:AK298463 IPI:IPI00927374
RefSeq:NP_001258636.1 SMR:B4DPR4 STRING:B4DPR4
Ensembl:ENST00000411987 UCSC:uc011aus.2 Uniprot:B4DPR4
Length = 373
Score = 453 (164.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 79/190 (41%), Positives = 118/190 (62%)
Query: 130 DRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE- 187
++ +C +AAAG C G+ C ++HG+ C C Q LHPF PE+R+ H K C +H +E
Sbjct: 124 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 183
Query: 188 --ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVN 245
A + SQ+ CS+C++ +L K +A+ER+FG+LS C+H +C+SCIR WR + N
Sbjct: 184 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFE----N 239
Query: 246 TALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTS 305
+++CP CR +S FVIPSV W +K E+I+++K + CK+F G G CPFG+
Sbjct: 240 PIIKSCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSK 299
Query: 306 CFYKHMVKPG 315
C Y+H G
Sbjct: 300 CLYRHAYPDG 309
Score = 40 (19.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 49 CRYEHVKP 56
CRY+H +P
Sbjct: 8 CRYDHTRP 15
>UNIPROTKB|F1MRH0 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000040303 ArrayExpress:F1MRH0 Uniprot:F1MRH0
Length = 340
Score = 304 (112.1 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 50/133 (37%), Positives = 83/133 (62%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ ++ ++ ++ + +C +AA G C GE C ++HGD C CG Q LHP
Sbjct: 199 EAPLQGSVTKEDAEKEQSAVETKKQLCPYAAVGECRYGENCAYLHGDACDMCGLQVLHPV 258
Query: 168 RPEEREEHMKSC-EKKQKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDH 223
+R +H+KSC E +K +E A++RS+++ C +C++ V K +ER+FG+LS C+H
Sbjct: 259 DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNH 318
Query: 224 PFCISCIRNWRSS 236
+C+ CIR WRS+
Sbjct: 319 TYCLKCIRKWRSA 331
Score = 176 (67.0 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 8 KFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
++F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP
Sbjct: 74 RYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKP 123
Score = 68 (29.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C + H
Sbjct: 100 VVCKYFQRGYCIYGDRCRYEH 120
Score = 42 (19.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 298 GNCPFGTSCFYKH 310
G C +G +C Y H
Sbjct: 231 GECRYGENCAYLH 243
>WB|WBGene00021924 [details] [associations]
symbol:Y55F3AM.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 OMA:FEEGANS EMBL:FO081813
GeneTree:ENSGT00390000014093 GeneID:176918 KEGG:cel:CELE_Y55F3AM.6
CTD:176918 RefSeq:NP_001023510.1 ProteinModelPortal:Q9N373
SMR:Q9N373 EnsemblMetazoa:Y55F3AM.6a UCSC:Y55F3AM.6a
WormBase:Y55F3AM.6a InParanoid:Q9N373 NextBio:894576
ArrayExpress:Q9N373 Uniprot:Q9N373
Length = 413
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 102/328 (31%), Positives = 160/328 (48%)
Query: 7 CKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXX 66
C++FA+G C KG C F+HD NIC + G CSYG CR+ H +P
Sbjct: 8 CRYFANGYCSKGNTCTFTHDVATRNENICHFNLVGKCSYGRACRFLHTRPRNDELPSCST 67
Query: 67 XXXXXXXXXXXXGITKV-PGVMPEL--SALSRPFLP----PNK---TAWNPESVCNDSLE 116
+V P +PEL +A + F+P P + T++ + D E
Sbjct: 68 PQTSQNQQNLQNSGQRVRPKQLPELKFNAQAAEFVPRWKMPQRGPVTSYAGAAASADHGE 127
Query: 117 NDEVDEPRNLKPADRSICSF-AAAGNCPRGEK-CPHIHGDTCPTCGKQCLHPFRPEEREE 174
+ + + + A +C + +G+C R + CP HG+ C C + LHP+ E R++
Sbjct: 128 SSSSFQSSH-EQAQLMMCPYHQKSGDCNRQDMDCPFAHGNYCDMCQQWSLHPYNAELRKK 186
Query: 175 HMKSCEKKQK-HLEA---LRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCI 230
H C +E L+++++ C +C++ + K +FG+L+ C H FC+ CI
Sbjct: 187 HENECVANHTTEMERAFLLQKTEQKTCGICMENIFEK----NLRFGILNGCQHCFCLDCI 242
Query: 231 RNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDC 290
R WRS + +R+CP CR+ S +VIPS+ W + +EK +I+ YK K C
Sbjct: 243 RQWRSKDQENVELATKTVRSCPECRQHSDYVIPSLFWVESGQEKDLLIEMYKENTKRKIC 302
Query: 291 KHFNF--GNGNCPFGTSCFYKHMVKPGS 316
K+++ G CPFG CFYKH + GS
Sbjct: 303 KYYSNERSRGACPFGNKCFYKHQLPDGS 330
>DICTYBASE|DDB_G0281657 [details] [associations]
symbol:DDB_G0281657 "Probable E3 ubiquitin-protein
ligase makorin-2" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 dictyBase:DDB_G0281657 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AAFI02000042 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 eggNOG:NOG268458 KO:K15687 RefSeq:XP_640562.1
ProteinModelPortal:Q54TM9 EnsemblProtists:DDB0204588 GeneID:8623172
KEGG:ddi:DDB_G0281657 InParanoid:Q54TM9 Uniprot:Q54TM9
Length = 974
Score = 409 (149.0 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 77/185 (41%), Positives = 110/185 (59%)
Query: 133 ICSFAAAGNCP-RGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALRR 191
+C F C R E C +IHG C CGK L P E+ E H+ C +Q+ +
Sbjct: 710 LCHFHIQSICKHRAEDCKYIHGLECQVCGKCMLVPGNAEQNEAHITDCLIQQEKFIQREQ 769
Query: 192 SQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRAC 251
+ +EC +C D ++ K R+FGLLS CDH FC+ CIR WR ++ + + N A+R C
Sbjct: 770 MKHLECGICYDSIVEKG----RRFGLLSHCDHVFCLDCIRMWRGTNNGAPTNNNNAVRLC 825
Query: 252 PICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHM 311
P+CR S+F+IP+ I + + E+K+EII+ YK KL +I CK+FN G G C FG+SC Y H+
Sbjct: 826 PLCRFNSHFIIPADI-FVSDEKKEEIIEIYKLKLATIPCKYFNKGKGTCKFGSSCMYAHL 884
Query: 312 VKPGS 316
G+
Sbjct: 885 NPDGT 889
Score = 86 (35.3 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICT 36
S + C+FF +G CL G +C+FSHD P + I T
Sbjct: 24 SNPIKCRFFKNGNCLSGSNCKFSHDIT-PSDTIST 57
Score = 55 (24.4 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 35 CTYYQKGFCSYGSRCRYEH 53
C +++ G C GS C++ H
Sbjct: 29 CRFFKNGNCLSGSNCKFSH 47
>FB|FBgn0030578 [details] [associations]
symbol:CG5347 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 eggNOG:NOG268458 KO:K15687
GeneTree:ENSGT00390000014093 EMBL:AY118346 RefSeq:NP_572970.1
UniGene:Dm.13454 SMR:Q9VY20 EnsemblMetazoa:FBtr0073936 GeneID:32403
KEGG:dme:Dmel_CG5347 UCSC:CG5347-RA FlyBase:FBgn0030578
InParanoid:Q9VY20 OrthoDB:EOG4FQZ7F GenomeRNAi:32403 NextBio:778288
Uniprot:Q9VY20
Length = 285
Score = 398 (145.2 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 74/185 (40%), Positives = 106/185 (57%)
Query: 131 RSICSFAAAGNCPRGEKCPH-IHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE- 187
+ IC + G+C G KC + +H + C C CLHP +R H + C E+ ++ +E
Sbjct: 91 QDICPYG--GSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQHEQAMEL 148
Query: 188 --ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVN 245
A+ RS++ C +C D V+ K ER+FG+LS+C H FC++CIR WR +
Sbjct: 149 SFAIARSKDKMCGICFDTVVEKK-GRERRFGILSKCKHIFCLTCIRTWRQAHQFEA---- 203
Query: 246 TALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTS 305
T R CP CR S FV PS W T EEK +++ Y++ + + DCK+FN G G CPFG
Sbjct: 204 TVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGNK 263
Query: 306 CFYKH 310
CFY+H
Sbjct: 264 CFYRH 268
Score = 69 (29.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN 33
+ +C+F G C G+ C FSHD P +N
Sbjct: 7 QTICRFHLLGICRFGDLCRFSHDETTPNDN 36
Score = 59 (25.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
IC ++ G C +G CR+ H
Sbjct: 9 ICRFHLLGICRFGDLCRFSH 28
>UNIPROTKB|F1SNR8 [details] [associations]
symbol:MKRN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 OMA:HGQCKEG InterPro:IPR026294
PANTHER:PTHR11224:SF16 EMBL:CU074319 Ensembl:ENSSSCT00000005338
Uniprot:F1SNR8
Length = 488
Score = 382 (139.5 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 71/189 (37%), Positives = 106/189 (56%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE-- 187
+ +C A G C RG C ++HGD C CG + LHPF +R +H ++C E ++++E
Sbjct: 222 QQLCRDAIMGQCFRGPSCMYLHGDMCDLCGLKVLHPFDGAQRADHRRACMEAHEQNMELS 281
Query: 188 -ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNT 246
A++RS + C +C++ V K + +FG+LS C+H +C+ CIR WRS+
Sbjct: 282 FAVQRSADKVCGICMEVVYEKANRNDCRFGILSSCNHTYCLKCIRRWRSARQFG----TW 337
Query: 247 ALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSC 306
+++CP CR +S FVIPS W EEKQ +I Y + C++F G CPF +C
Sbjct: 338 VVKSCPQCRVISTFVIPSEFWVEEEEEKQRLIQQYLEAMSHKPCRYFVRGRF-CPFEENC 396
Query: 307 FYKHMVKPG 315
FYKH G
Sbjct: 397 FYKHAFPEG 405
Score = 84 (34.6 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHD 26
+K V+C+++ H C +GE+C +SHD
Sbjct: 78 TKEVVCRYYLHAQCKEGENCRYSHD 102
Score = 61 (26.5 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
+C YY C G CRY H
Sbjct: 82 VCRYYLHAQCKEGENCRYSH 101
>UNIPROTKB|G3MWT5 [details] [associations]
symbol:G3MWT5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 EMBL:DAAA02074815
Ensembl:ENSBTAT00000009242 OMA:FVHERKE Uniprot:G3MWT5
Length = 335
Score = 400 (145.9 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 74/217 (34%), Positives = 123/217 (56%)
Query: 103 TAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQ 162
T + E S+ ++++ ++ + C +A G C GE C +HGD C CG Q
Sbjct: 119 TPSSTEGPLQGSVTKEDLEREQSTVNTKKQFCPYATVGECRYGEYCMDLHGDACDMCGLQ 178
Query: 163 CLHPFRPEEREEHMKSCEKK-QKHLE---ALRRSQEIECSVCLDRVLSKPTAAERKFGLL 218
L+P +R +H+KSC K +K +E ++RS+++ C +C++ V K ++ FG+L
Sbjct: 179 VLYPVDAAQRSQHIKSCIKTHKKDMELSFTVQRSKDMVCGICMEVVYEKANPSKHHFGIL 238
Query: 219 SECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPEEKQEII 278
S C+H +C+ CI NWRS+ + +++C C+ +S FVIPS W +EKQ++I
Sbjct: 239 SNCNHIYCLKCICNWRSAKQFE----SKMIKSCLECQIISNFVIPSEYWM-EEKEKQKLI 293
Query: 279 DSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
YK + + C++F+ G+G+C FG +CFYKH G
Sbjct: 294 QKYKKAMSNKACRYFDEGHGSCLFGGNCFYKHAYPDG 330
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 57/209 (27%), Positives = 91/209 (43%)
Query: 8 KFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXX 67
++F HG C +G++C ++HD P +C Y+Q+G+C YG RCR EH KP
Sbjct: 9 QYFMHGVCKEGDNCRYTHDLSGPYGVVCKYFQRGYCIYGDRCRCEHSKPLKQEEATATDL 68
Query: 68 XXXXXXXXXXXGITKVPGV---MPELSALSRPFLPPNKTAWNPESVCND----------- 113
+ P V M E + + F + + + C
Sbjct: 69 TEKPSLAASSSLSSVGPTVEMNMGEAESRNSNFATVGAGSEDRQPYCGQITPSSTEGPLQ 128
Query: 114 -SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER 172
S+ ++++ ++ + C +A G C GE C +HGD C CG Q L+P +R
Sbjct: 129 GSVTKEDLEREQSTVNTKKQFCPYATVGECRYGEYCMDLHGDACDMCGLQVLYPVDAAQR 188
Query: 173 EEHMKSCEKK-QKHLEALRRSQEIECSVC 200
+H+KSC K +K +E Q + VC
Sbjct: 189 SQHIKSCIKTHKKDMELSFTVQRSKDMVC 217
Score = 63 (27.2 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C H
Sbjct: 34 VVCKYFQRGYCIYGDRCRCEH 54
>UNIPROTKB|F1PZ14 [details] [associations]
symbol:F1PZ14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 EMBL:AAEX03011206
Ensembl:ENSCAFT00000005877 Uniprot:F1PZ14
Length = 380
Score = 344 (126.2 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 66/183 (36%), Positives = 103/183 (56%)
Query: 137 AAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE---ALRRS 192
AA G CP E ++HGD+C CG + LH +R +H +SC E K +E A+R S
Sbjct: 119 AAGGECPYRENRVYLHGDSCDRCGLRVLHLMDAAQRSQHRRSCSEAHGKDVELSSAVRHS 178
Query: 193 QEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACP 252
+++ C +C++ V K +E FG+++ C+ +C+ CIR WRS+ + +++CP
Sbjct: 179 KDVVCGICMEVVYEKANPSECHFGIVTNCNPTYCLKCIRKWRSAKQLE----SEIIKSCP 234
Query: 253 ICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMV 312
CR + + VIPS W EEKQ++ YK + +C++F G+CPFG + FYKH
Sbjct: 235 QCR-IPFNVIPSEYWVEEKEEKQKLNQRYKEAMSIKECRYF-VERGSCPFGGNYFYKHAY 292
Query: 313 KPG 315
G
Sbjct: 293 PDG 295
Score = 118 (46.6 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 17 KGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+G++C +SHD D P + C +Q+G C YG RCR EH KP
Sbjct: 1 EGDNCRYSHDLSDCPYGVACRRFQRGCCIYGDRCRDEHGKP 41
Score = 53 (23.7 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V C+ F G C+ G+ C H
Sbjct: 18 VACRRFQRGCCIYGDRCRDEH 38
>UNIPROTKB|F6QQR5 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:DAAA02054582
IPI:IPI00692246 Ensembl:ENSBTAT00000005927 Uniprot:F6QQR5
Length = 314
Score = 375 (137.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 68/156 (43%), Positives = 100/156 (64%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKH-LE-- 187
+ +C +AAAG C G+ C ++HGD C C + LHPF PE+R+ H K C +H +E
Sbjct: 159 QQLCPYAAAGECRFGDACVYLHGDVCEICRLRVLHPFDPEQRKAHEKVCMAAFEHEMEKA 218
Query: 188 -ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNT 246
AL+ SQ+ CS+C++ VL K +A+ER+FG+LS C H +C+SCIR WR + N
Sbjct: 219 FALQASQDKVCSICMEVVLEKASASERRFGILSSCSHTYCLSCIRQWRCAKQFE----NP 274
Query: 247 ALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYK 282
+++CP CR +S FVIPSV W +K E+I+++K
Sbjct: 275 IIKSCPECRVISEFVIPSVYWVEDQNKKNELIEAFK 310
Score = 80 (33.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 8 KFFAHGACLKGEHCEFSHDWKDP-PNNICTYY--QKGFCSYGSRCRYEHVKP 56
++F HG C +G C FSHD + P+ C C + RY+H +P
Sbjct: 1 RYFMHGVCREGSQCLFSHDLANSKPSTACACGGPDASACVF---LRYDHTRP 49
Score = 52 (23.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 25/115 (21%), Positives = 33/115 (28%)
Query: 37 YYQKGFCSYGSRCRYEH----VKPXXXXX----XXXXXXXXXXXXXXXXXGITKVPGVMP 88
Y+ G C GS+C + H KP G MP
Sbjct: 2 YFMHGVCREGSQCLFSHDLANSKPSTACACGGPDASACVFLRYDHTRPSAAAGGAVGTMP 61
Query: 89 ELSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCP 143
S F P + S+ +L E R L DR++ A CP
Sbjct: 62 H-GVPSPGFHSPRPASELTASIVKTNLHEPGKREKRTLVLRDRNLSGMAEDRTCP 115
>FB|FBgn0029152 [details] [associations]
symbol:Mkrn1 "Makorin 1" species:7227 "Drosophila
melanogaster" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 eggNOG:NOG268458 ChiTaRS:MKRN1 EMBL:AF192794
EMBL:AF192788 STRING:Q9TVX6 FlyBase:FBgn0029152 InParanoid:Q9TVX6
OrthoDB:EOG4CC2GZ Uniprot:Q9TVX6
Length = 386
Score = 379 (138.5 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 70/180 (38%), Positives = 102/180 (56%)
Query: 141 NCPRGEKCPH-IHGDTCPTCGKQCLHPFRPEEREEHMKSC-EKKQKHLE---ALRRSQEI 195
+C GE + IH + C C + CLHP +R H + C ++ ++ +E A+ RS++
Sbjct: 153 SCAWGEFSAYPIHMELCEMCDQYCLHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDK 212
Query: 196 ECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICR 255
C +C D ++ K E++FG+L C+H FC+ CIR WR + N RACP CR
Sbjct: 213 TCGICFDTIMEK-AGREKRFGILPNCNHIFCLECIRTWRQAKQFE----NKITRACPECR 267
Query: 256 KLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
S FV PS W T EEK ++++ Y++ L + DCK+F G G CPFG CFYKH + G
Sbjct: 268 VCSDFVCPSAFWMETKEEKDKLLNDYRAALGAKDCKYFKKGEGKCPFGNKCFYKHALPNG 327
Score = 72 (30.4 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 34 ICTYYQKGFCSYGSRCRYEH 53
IC YY +G C +G CR+ H
Sbjct: 22 ICRYYVRGICRFGELCRFSH 41
Score = 70 (29.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHD 26
+ +C+++ G C GE C FSHD
Sbjct: 20 QTICRYYVRGICRFGELCRFSHD 42
>ZFIN|ZDB-GENE-030131-5954 [details] [associations]
symbol:mkrn4 "makorin, ring finger protein, 4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
Prosite:PS00518 ZFIN:ZDB-GENE-030131-5954 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
eggNOG:NOG268458 GeneTree:ENSGT00390000014093 EMBL:CU302443
IPI:IPI00486140 RefSeq:NP_001121808.1 UniGene:Dr.29995
Ensembl:ENSDART00000104346 GeneID:559882 KEGG:dre:559882 CTD:559882
HOGENOM:HOG000206392 HOVERGEN:HBG104302 OMA:NHSFCLQ
OrthoDB:EOG4WM4W6 NextBio:20883183 Uniprot:A9C4A6
Length = 397
Score = 259 (96.2 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 56/177 (31%), Positives = 84/177 (47%)
Query: 188 ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTA 247
A +S ++ C +C+D++ K TA ER++G+L C+H FCI CI WR +
Sbjct: 225 AFDQSNDVACGICMDKISEKSTAQERRYGILPNCNHAFCIGCIVTWRKTKDFQ----EEV 280
Query: 248 LRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCF 307
++ CP CR S F IPS W EEK +I S+K + + C F +G CPF + C
Sbjct: 281 IKGCPQCRVKSSFYIPSKHWVCDGEEKASLIASFKERSSKLKCTFF-MRHGCCPFKSECI 339
Query: 308 YKHMVKPGSYMWKYHXXXXXXXXXXXXXXXXXNVVDMDSFIDAFGDLLGEDEPDFFD 364
Y H + P ++ + + + S+I A LL ED+ D D
Sbjct: 340 YSHDM-PVNHTHRRRRSTHRDTAEMLEHLGIDGL-QLWSYIFAL-TLLDEDDDDLLD 393
Score = 120 (47.3 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWKDPPN-NI-CTYYQKGFCSYGSRCRYEH 53
+C+ F +G+C G+ C + H++ P+ + C Y+QKG C +G RCRY H
Sbjct: 17 VCRQFINGSCRYGQSCYYLHEFPSVPSFQVQCRYFQKGGCWFGDRCRYLH 66
Score = 58 (25.5 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 24 SHDWKDPPNN--ICTYYQKGFCSYGSRCRYEHVKP 56
+H K +N +C + G C YG C Y H P
Sbjct: 5 AHTSKSSGDNSAVCRQFINGSCRYGQSCYYLHEFP 39
Score = 58 (25.5 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSH 25
S +V C++F G C G+ C + H
Sbjct: 43 SFQVQCRYFQKGGCWFGDRCRYLH 66
Score = 48 (22.0 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 119 EVDEPRNLKPADRS-ICSFAAAGNCPRGEKCPHIHG-DTCPTCGKQC 163
E D + D S +C G+C G+ C ++H + P+ QC
Sbjct: 2 ERDAHTSKSSGDNSAVCRQFINGSCRYGQSCYYLHEFPSVPSFQVQC 48
Score = 45 (20.9 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 128 PADRSICSFAAAGNCPRGEKCPHIH 152
P+ + C + G C G++C ++H
Sbjct: 42 PSFQVQCRYFQKGGCWFGDRCRYLH 66
>FB|FBgn0030577 [details] [associations]
symbol:CG5334 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 EMBL:AE014298
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 RefSeq:NP_572969.1 UniGene:Dm.26630
ProteinModelPortal:Q9VY21 SMR:Q9VY21 IntAct:Q9VY21
MINT:MINT-1708614 PRIDE:Q9VY21 EnsemblMetazoa:FBtr0073935
GeneID:32402 KEGG:dme:Dmel_CG5334 UCSC:CG5334-RA
FlyBase:FBgn0030577 InParanoid:Q9VY21 OrthoDB:EOG4FJ6SX
PhylomeDB:Q9VY21 GenomeRNAi:32402 NextBio:778283
ArrayExpress:Q9VY21 Bgee:Q9VY21 Uniprot:Q9VY21
Length = 210
Score = 302 (111.4 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 65/198 (32%), Positives = 95/198 (47%)
Query: 133 ICSFAAAGNCPRGEKCPHIH----GDTC-PTCGKQCLHPFRPEEREEHMKSCEKKQKHLE 187
IC + GNC + C + H D P R + + ++
Sbjct: 11 ICRYRLRGNCRFDDLCRYSHDVLQNDNLRPQISNNADEVVGHANRYSRPMTGANATEEMK 70
Query: 188 ---ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDV 244
A+ +SQ+ C +CL+ V+ K E +FG+L +C H FC++CIR WR +
Sbjct: 71 LSFAIAKSQDKMCGICLETVVKK-RGRECRFGILPKCKHIFCLTCIRRWRQAEYIE---- 125
Query: 245 NTALRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGT 304
+ R CP CR S FV PS W T EEK +++ Y++ + + DCK+FN G G CPFGT
Sbjct: 126 DNVKRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGT 185
Query: 305 SCFYKHMVKPGSYMWKYH 322
+CFY H G + H
Sbjct: 186 NCFYNHRSLAGDNRIQRH 203
Score = 58 (25.5 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 32 NNICTYYQKGFCSYGSRCRYEH 53
+ IC Y +G C + CRY H
Sbjct: 9 HKICRYRLRGNCRFDDLCRYSH 30
>DICTYBASE|DDB_G0268546 [details] [associations]
symbol:DDB_G0268546 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 dictyBase:DDB_G0268546 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 eggNOG:NOG268458
RefSeq:XP_647407.1 EnsemblProtists:DDB0216566 GeneID:8616214
KEGG:ddi:DDB_G0268546 InParanoid:Q55FX6 Uniprot:Q55FX6
Length = 365
Score = 221 (82.9 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 45/142 (31%), Positives = 76/142 (53%)
Query: 111 CNDSLENDEVDEPRNLKPADRSICSF-AAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRP 169
CN+ + N +++IC F + G C G+ C +IHG+ C C K L P
Sbjct: 29 CNNQHQQINNKNNNNNISKEQNICFFFSRKGYCRNGDDCRYIHGNLCDICNKAMLIPDNI 88
Query: 170 EEREEHMKSCEKKQKHLEALRRSQEI---ECSVCLDRVLSKPTAAERKFGLLSECDHPFC 226
E+ + H C Q++ + LR+++ + EC +C + ++ + +KFGLLS C H FC
Sbjct: 89 EQNQTHYIECLLNQEN-QLLRQNESMRQYECEICFESIVD----SGKKFGLLSHCQHKFC 143
Query: 227 ISCIRNWRSSSPTSGMDVNTAL 248
++CIR+WR S+ S + N+ +
Sbjct: 144 LNCIRSWRYSANNSTSNNNSTI 165
Score = 165 (63.1 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 248 LRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCF 307
+R CP CR +SYF+IPS I Y ++K+++I+ YK KL I CK+F G C FG C
Sbjct: 224 VRKCPTCRTVSYFIIPSDI-YVVGDDKEQMINMYKMKLSKIPCKYFE-NQGYCKFGLHCM 281
Query: 308 YKH 310
Y H
Sbjct: 282 YNH 284
Score = 65 (27.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 33 NICTYY-QKGFCSYGSRCRYEH 53
NIC ++ +KG+C G CRY H
Sbjct: 50 NICFFFSRKGYCRNGDDCRYIH 71
Score = 48 (22.0 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 6 LCKFFAH-GACLKGEHCEFSH 25
+C FF+ G C G+ C + H
Sbjct: 51 ICFFFSRKGYCRNGDDCRYIH 71
>UNIPROTKB|F5H0I9 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI01015445
ProteinModelPortal:F5H0I9 SMR:F5H0I9 Ensembl:ENST00000437223
UCSC:uc011krd.1 ArrayExpress:F5H0I9 Bgee:F5H0I9 Uniprot:F5H0I9
Length = 216
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 54/128 (42%), Positives = 82/128 (64%)
Query: 188 ALRRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTA 247
A++RS+++ C +C++ V K +ER+FG+LS C+H +C+ CIR WRS+ +
Sbjct: 6 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFE----SKI 61
Query: 248 LRACPICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCF 307
+++CP CR S FVIPS W EEKQ++I YK + + C++F+ G G+CPFG +CF
Sbjct: 62 IKSCPECRITSNFVIPSEYWVEEKEEKQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCF 121
Query: 308 YKHMVKPG 315
YKH G
Sbjct: 122 YKHAYPDG 129
>UNIPROTKB|C9IY57 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00947551
ProteinModelPortal:C9IY57 SMR:C9IY57 STRING:C9IY57
Ensembl:ENST00000471104 ArrayExpress:C9IY57 Bgee:C9IY57
Uniprot:C9IY57
Length = 193
Score = 167 (63.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 12 HGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP
Sbjct: 2 HGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP 47
Score = 148 (57.2 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPF 167
E+ S+ +E ++ + + +C +AA G C GE C ++HGD+C CG Q LHP
Sbjct: 124 EAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPM 183
Query: 168 RPEEREEHMK 177
+R +H+K
Sbjct: 184 DAAQRSQHIK 193
Score = 68 (29.0 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 5 VLCKFFAHGACLKGEHCEFSH 25
V+CK+F G C+ G+ C + H
Sbjct: 24 VVCKYFQRGYCIYGDRCRYEH 44
Score = 43 (20.2 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 298 GNCPFGTSCFYKH 310
G C +G +C Y H
Sbjct: 156 GECRYGENCVYLH 168
Score = 37 (18.1 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 153 GDTCPTCGKQCLH-PFRPEEREEHMKSCE-KKQ 183
G T P+C + L EE E+ + E KKQ
Sbjct: 116 GRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQ 148
>UNIPROTKB|I3LVF6 [details] [associations]
symbol:I3LVF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
EMBL:CU467978 Ensembl:ENSSSCT00000027300 OMA:LGCLRTW Uniprot:I3LVF6
Length = 277
Score = 213 (80.0 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 41/121 (33%), Positives = 62/121 (51%)
Query: 192 SQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRAC 251
S + C +C+D+V KP A ER F +L C H C+ C+R W+ + S R C
Sbjct: 161 SHDTMCGICMDKVWDKPEA-ERIFRILPNCSHARCLGCLRTWQKNRRDSPW------RTC 213
Query: 252 PICRKLSYFVIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHM 311
P C S ++IP W EK+++I ++K++ + K GNG CPF + C Y H
Sbjct: 214 PQCHVHSSYLIPCKFWVSEGPEKEQLIRNFKARTRKDKFKMIKRGNGCCPFRSDCIYLHQ 273
Query: 312 V 312
+
Sbjct: 274 L 274
Score = 86 (35.3 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 10 FAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHV 54
F G C + C + DWK + +C Y+Q GF S+G+ Y+H+
Sbjct: 3 FDGGGCHRVPSCGLAQDWK--VSQVCRYFQWGFGSHGALRSYQHL 45
>FB|FBgn0036809 [details] [associations]
symbol:CG12477 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
Prosite:PS00518 EMBL:AE014296 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 EMBL:BT024995 RefSeq:NP_649055.1
UniGene:Dm.27877 SMR:Q9VVS2 IntAct:Q9VVS2 MINT:MINT-994082
EnsemblMetazoa:FBtr0075089 GeneID:40040 KEGG:dme:Dmel_CG12477
UCSC:CG12477-RA FlyBase:FBgn0036809 eggNOG:NOG253492
InParanoid:Q9VVS2 OrthoDB:EOG40K6FR GenomeRNAi:40040 NextBio:816689
Uniprot:Q9VVS2
Length = 265
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 158 TCGKQCLHPFRPEEREEHMKSCEKKQKHLE-----ALRRSQEIECSVCLDRVLSKPTAAE 212
TC + P + +K H++ + RSQ+ +C +C + ++ K +
Sbjct: 56 TCTTVAVRPSGVATSADIVKGSSSVSSHVQPSWRSSFARSQDKKCGICFETIMEKE-GGD 114
Query: 213 RKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYFVIPSVIWYYTPE 272
++FG+L C+H FC CI WR ++ + RACP CR S FV PS W
Sbjct: 115 KRFGILPSCNHVFCFQCICTWRHATQYAYQ----VTRACPECRVWSNFVCPSAFWVEEKV 170
Query: 273 EKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPGSYM 318
K ++I+ + + +++ DCK+F G G C FG CFYKH + Y+
Sbjct: 171 AKDQLINDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPNADYV 216
>UNIPROTKB|E1BYP2 [details] [associations]
symbol:Gga.11719 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 EMBL:AC140943 IPI:IPI00576055
Ensembl:ENSGALT00000035067 OMA:TVIKACP Uniprot:E1BYP2
Length = 176
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 47/115 (40%), Positives = 64/115 (55%)
Query: 201 LDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALRACPICRKLSYF 260
++RV K ER FG+L C H FC+ CIR WR S +T ++ACP CR S +
Sbjct: 1 MERVCEKALPEERLFGILPNCSHAFCLGCIRTWRRSRDFP----STVIKACPECRLTSAY 56
Query: 261 VIPSVIWYYTPEEKQEIIDSYKSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPG 315
IP W +EKQ++I+S+K++ I CK F G CPFG+ C Y H + G
Sbjct: 57 YIPHKFWVSDGDEKQQLIESFKARTGRIRCKFFTRNRGRCPFGSDCIYLHELPSG 111
>UNIPROTKB|J9NRX8 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
GeneTree:ENSGT00390000014093 EMBL:AAEX03010214 EMBL:AAEX03010213
Ensembl:ENSCAFT00000044374 Uniprot:J9NRX8
Length = 209
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 12 HGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEH-VKPXXXXXXXXXXXXX 69
HG C +G++C +SHD D P + C Y+Q+G+C YG RC V P
Sbjct: 2 HGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCSLSSGVGPVVEMNMGEAESRN 61
Query: 70 XXXXXXXXXGITKVPGVMPELSALSRPFLPPNKTAWN-PESVCNDSLENDEVDEPRNLKP 128
V + E +P+ +TA + E+ S+ +E ++ +
Sbjct: 62 SNFATVGAGSEDWVNAI--EFVP-GQPYC--GRTAPSCTEAPPQGSVTKEESEKEQTAVE 116
Query: 129 ADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMK 177
+ +C +AA G C GE C ++HGD+C CG Q LHP +R +H+K
Sbjct: 117 TKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQRSQHIK 165
>UNIPROTKB|C9J031 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00946491
ProteinModelPortal:C9J031 SMR:C9J031 STRING:C9J031
Ensembl:ENST00000467513 ArrayExpress:C9J031 Bgee:C9J031
Uniprot:C9J031
Length = 165
Score = 167 (63.8 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 12 HGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP
Sbjct: 2 HGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP 47
Score = 63 (27.2 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 108 ESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKC 148
E+ S+ +E ++ + + +C +AA G C GE C
Sbjct: 124 EAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENC 164
Score = 37 (18.1 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 153 GDTCPTCGKQCLH-PFRPEEREEHMKSCE-KKQ 183
G T P+C + L EE E+ + E KKQ
Sbjct: 116 GRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQ 148
>UNIPROTKB|C9IZP5 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00947058
ProteinModelPortal:C9IZP5 SMR:C9IZP5 STRING:C9IZP5
Ensembl:ENST00000473444 HOGENOM:HOG000213911 ArrayExpress:C9IZP5
Bgee:C9IZP5 Uniprot:C9IZP5
Length = 102
Score = 175 (66.7 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 9 FFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
+F HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP
Sbjct: 14 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP 62
>UNIPROTKB|C9JYX8 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 HOGENOM:HOG000213911 IPI:IPI00944929
ProteinModelPortal:C9JYX8 SMR:C9JYX8 STRING:C9JYX8
Ensembl:ENST00000494939 ArrayExpress:C9JYX8 Bgee:C9JYX8
Uniprot:C9JYX8
Length = 136
Score = 167 (63.8 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 12 HGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP
Sbjct: 2 HGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP 47
>UNIPROTKB|C9J7K5 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00946335
ProteinModelPortal:C9J7K5 SMR:C9J7K5 STRING:C9J7K5
Ensembl:ENST00000481705 ArrayExpress:C9J7K5 Bgee:C9J7K5
Uniprot:C9J7K5
Length = 148
Score = 166 (63.5 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCR 50
+K+V C++F HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCR
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCR 105
>UNIPROTKB|F8WAS8 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00945768
ProteinModelPortal:F8WAS8 SMR:F8WAS8 Ensembl:ENST00000495305
ArrayExpress:F8WAS8 Bgee:F8WAS8 Uniprot:F8WAS8
Length = 175
Score = 161 (61.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRC 49
+K+V C++F HG C +G++C +SHD D P ++ C Y+Q+G+C YG RC
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRC 104
>POMBASE|SPAC227.08c [details] [associations]
symbol:yth1 "mRNA cleavage and polyadenylation
specificity factor complex Yth1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IC] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
PomBase:SPAC227.08c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006378
GO:GO:0003723 eggNOG:COG5084 GO:GO:0005847 HOGENOM:HOG000212457
KO:K14404 OrthoDB:EOG4PG99D PIR:T50164 RefSeq:NP_592962.1
ProteinModelPortal:Q9UTD1 SMR:Q9UTD1 STRING:Q9UTD1
EnsemblFungi:SPAC227.08c.1 GeneID:2541506 KEGG:spo:SPAC227.08c
NextBio:20802605 Uniprot:Q9UTD1
Length = 170
Score = 125 (49.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 5 VLCKFFAHGACLKGEHCEFSHDW---KDPPNNICTYY-QKGFCSYGSRCRYEHVKP 56
V+CK + G C KGE C+F H++ K PP C +Y ++G+CS G C Y H+ P
Sbjct: 52 VVCKHWLRGLCKKGEQCDFLHEYNLKKMPP---CHFYAERGWCSNGEECLYLHLDP 104
Score = 105 (42.0 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHV-KP 56
+ K C F+A G C GE C + H DP + C +Y GFC G CR +HV KP
Sbjct: 76 LKKMPPCHFYAERGWCSNGEECLYLH--LDPSKQVGVCAWYNMGFCPLGPICRGKHVRKP 133
Score = 52 (23.4 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKHMVKP 314
C +N G CP G C KH+ KP
Sbjct: 111 CAWYNMGF--CPLGPICRGKHVRKP 133
Score = 50 (22.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C AG CP G CP H
Sbjct: 136 CPKYLAGFCPLGPNCPDAH 154
>UNIPROTKB|H9KVA5 [details] [associations]
symbol:CPSF4L "Putative cleavage and
polyadenylation-specificity factor subunit 4-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC087301 HGNC:HGNC:33632
ProteinModelPortal:H9KVA5 SMR:H9KVA5 PRIDE:H9KVA5
Ensembl:ENST00000397671 Bgee:H9KVA5 Uniprot:H9KVA5
Length = 152
Score = 112 (44.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 5 VLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
V+CK + G C KG+HC+F H + C +Y K G CS C + HVKP
Sbjct: 2 VVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCS-NKECSFLHVKP 53
Score = 50 (22.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 95 RPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIH 152
+P W + C D+ + + R++ P R +C G CP G KC H
Sbjct: 52 KPAFKSQDCPWYDQGFCKDA---GPLCKYRHV-P--RIMCLNYLVGFCPEGPKCQFAH 103
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 294 NFGNGNCPFGTSCFYKHMVKP 314
N+ G CP G C + H P
Sbjct: 87 NYLVGFCPEGPKCQFAHCSLP 107
>CGD|CAL0005897 [details] [associations]
symbol:YTH1 species:5476 "Candida albicans" [GO:0042493
"response to drug" evidence=IMP] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 CGD:CAL0005897
GO:GO:0005634 GO:GO:0042493 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0003723 eggNOG:COG5084 KO:K14404
EMBL:AACQ01000145 EMBL:AACQ01000144 RefSeq:XP_712810.1
RefSeq:XP_712839.1 ProteinModelPortal:Q59T36 SMR:Q59T36
STRING:Q59T36 GeneID:3645540 GeneID:3645572 KEGG:cal:CaO19.14170
KEGG:cal:CaO19.6881 Uniprot:Q59T36
Length = 215
Score = 135 (52.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
S +++CK + G C KG+HCEF H++ C +Y K G+C+ S C Y HV P
Sbjct: 66 SNKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQTSECLYLHVDP 121
Score = 49 (22.3 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R +C G CP+G +C H
Sbjct: 149 RVLCPLYLYGFCPKGPECEFTH 170
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 294 NFGNGNCPFGTSCFYKHM 311
N+ G C G +C +H+
Sbjct: 130 NYNQGFCSEGPNCKNRHV 147
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 298 GNCPFGTSCFYKH 310
G CP G C + H
Sbjct: 158 GFCPKGPECEFTH 170
>UNIPROTKB|Q59T36 [details] [associations]
symbol:YTH1 "mRNA 3'-end-processing protein YTH1"
species:237561 "Candida albicans SC5314" [GO:0042493 "response to
drug" evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 CGD:CAL0005897 GO:GO:0005634 GO:GO:0042493
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0003723
eggNOG:COG5084 KO:K14404 EMBL:AACQ01000145 EMBL:AACQ01000144
RefSeq:XP_712810.1 RefSeq:XP_712839.1 ProteinModelPortal:Q59T36
SMR:Q59T36 STRING:Q59T36 GeneID:3645540 GeneID:3645572
KEGG:cal:CaO19.14170 KEGG:cal:CaO19.6881 Uniprot:Q59T36
Length = 215
Score = 135 (52.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
S +++CK + G C KG+HCEF H++ C +Y K G+C+ S C Y HV P
Sbjct: 66 SNKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQTSECLYLHVDP 121
Score = 49 (22.3 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R +C G CP+G +C H
Sbjct: 149 RVLCPLYLYGFCPKGPECEFTH 170
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 294 NFGNGNCPFGTSCFYKHM 311
N+ G C G +C +H+
Sbjct: 130 NYNQGFCSEGPNCKNRHV 147
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 298 GNCPFGTSCFYKH 310
G CP G C + H
Sbjct: 158 GFCPKGPECEFTH 170
>UNIPROTKB|C9JYI0 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 GO:GO:0008270
GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224 EMBL:AC069335
HGNC:HGNC:7112 IPI:IPI00945351 ProteinModelPortal:C9JYI0 SMR:C9JYI0
STRING:C9JYI0 Ensembl:ENST00000480552 ArrayExpress:C9JYI0
Bgee:C9JYI0 Uniprot:C9JYI0
Length = 111
Score = 132 (51.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 12 HGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRC 49
HG C +G++C +SHD D P ++ C Y+Q+G+C YG RC
Sbjct: 2 HGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRC 40
>UNIPROTKB|C9K0K2 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation-specificity
factor subunit 4" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 HOGENOM:HOG000212457
HGNC:HGNC:2327 EMBL:AC073063 IPI:IPI01014332
ProteinModelPortal:C9K0K2 SMR:C9K0K2 STRING:C9K0K2
Ensembl:ENST00000412686 ArrayExpress:C9K0K2 Bgee:C9K0K2
Uniprot:C9K0K2
Length = 112
Score = 108 (43.1 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 11 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 64
Score = 101 (40.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHVK 55
M+K C F++ G C E C F H DP + I C +Y +GFC +G CR+ H +
Sbjct: 37 MTKMPECYFYSKFGECSNKE-CPFLHI--DPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
Score = 41 (19.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 131 RSICSFAAAGNCPRGEKC 148
R IC G CP G C
Sbjct: 92 RVICVNYLVGFCPEGPSC 109
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 71 CPWYDRGFCKHGPLCRHRH 89
>POMBASE|SPAC3A11.02 [details] [associations]
symbol:cps3 "zinc finger protein Cps3" species:4896
"Schizosaccharomyces pombe" [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 PROSITE:PS50103
SMART:SM00356 PomBase:SPAC3A11.02 GO:GO:0005829 GO:GO:0007126
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5084 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AB017490 PIR:T11624 RefSeq:NP_594201.1
ProteinModelPortal:P41000 EnsemblFungi:SPAC3A11.02.1 GeneID:2543054
KEGG:spo:SPAC3A11.02 OrthoDB:EOG49S9H4 NextBio:20804083
Uniprot:P41000
Length = 583
Score = 153 (58.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKP 56
+ V CKFF G C G++C FSHD + IC Y+QKG C +GS+C EHV P
Sbjct: 37 QHVPCKFFRQGTCTSGKNCIFSHDLELATEKTICKYFQKGNCKFGSKCALEHVLP 91
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 102 KTAWNPESVCNDSLENDEVDEPRNLKPADR-SICSFAAAGNCPRGEKCPHI 151
+ +NPES+ + L+ ++ + A S+ +F A GN R K P +
Sbjct: 278 RNIFNPESM-SLGLKPPILNRSYSASMAPGFSMNTFTATGNLGRPTKSPSV 327
>UNIPROTKB|F1LTU5 [details] [associations]
symbol:Zc3h6 "Protein Zc3h6" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:IRPQYSD
IPI:IPI00870619 Ensembl:ENSRNOT00000024322 RGD:1311061
ArrayExpress:F1LTU5 Uniprot:F1LTU5
Length = 1171
Score = 147 (56.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+HC+F+HD + + +C YY +G+C+ G C Y H
Sbjct: 264 ICKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH 312
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 134 CSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER--EEHMKSCEKKQKH 185
C + + C +G+KC H D K +E E + E+ +KH
Sbjct: 319 CFYHSGAKCYQGDKCKFSHDDLTKETKKLLDKVLNADEELVNEDERELEELRKH 372
>ASPGD|ASPL0000062209 [details] [associations]
symbol:AN0298 species:162425 "Emericella nidulans"
[GO:0006379 "mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 EMBL:BN001308
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0003723
eggNOG:COG5084 EMBL:AACD01000006 HOGENOM:HOG000212457 KO:K14404
RefSeq:XP_657902.1 ProteinModelPortal:Q5BGN2 STRING:Q5BGN2
EnsemblFungi:CADANIAT00002417 GeneID:2876077 KEGG:ani:AN0298.2
OMA:DPDRPVC OrthoDB:EOG4PG99D Uniprot:Q5BGN2
Length = 254
Score = 103 (41.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 VLCKFFAHGACLKGEHCEFSHDWKDPPNNIC-TYYQKGFCSYGSRCRYEHVK 55
++CK F G C KG CE+ H++ C ++ + G+C G C Y+HV+
Sbjct: 90 LVCKHFLKGLCKKGMKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVR 141
Score = 84 (34.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 7 CKFFAH-GACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
C+ F+ G C G+ C + H + C +Y +GFC G C HV+
Sbjct: 120 CQSFSRSGYCPNGDDCLYQHVREQARLPPCEHYDQGFCPLGPLCAKRHVR 169
Score = 77 (32.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALR 190
R +C + AG CP G C + H K + + EE EH ++ ++++ E R
Sbjct: 170 RRLCPYYVAGFCPEGPNCANAHPRWSENLPKPTIRVEKTEEELEHERNLIREEQERERER 229
Query: 191 RSQ 193
+
Sbjct: 230 ERE 232
>UNIPROTKB|A6NMK7 [details] [associations]
symbol:CPSF4L "Putative cleavage and polyadenylation
specificity factor subunit 4-like protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 eggNOG:COG5084 EMBL:AC087301 EMBL:BC157870
IPI:IPI00376104 RefSeq:NP_001123357.1 UniGene:Hs.534707
ProteinModelPortal:A6NMK7 SMR:A6NMK7 PhosphoSite:A6NMK7
PRIDE:A6NMK7 Ensembl:ENST00000344935 GeneID:642843 KEGG:hsa:642843
UCSC:uc010dfk.1 CTD:642843 GeneCards:GC17M071244 HGNC:HGNC:33632
HPA:HPA044047 neXtProt:NX_A6NMK7 PharmGKB:PA162382768
HOGENOM:HOG000212457 HOVERGEN:HBG051108 OMA:HVKPASK
GenomeRNAi:642843 NextBio:114229 Bgee:A6NMK7 CleanEx:HS_CPSF4L
Genevestigator:A6NMK7 Uniprot:A6NMK7
Length = 179
Score = 116 (45.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+HC+F H + C +Y K G CS C + HVKP
Sbjct: 64 KMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCS-NKECSFLHVKP 117
Score = 108 (43.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 2 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEH 53
S +C FF G C KG+ C F HD + +C ++ +G C G C++ H
Sbjct: 36 SASAVCNFFTKGLCEKGKLCPFRHD-RGEKMVVCKHWLRGLCKKGDHCKFLH 86
Score = 49 (22.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 282 KSKLKSIDCKHFNFGNGNCPFGTSCFYKHM 311
K KS DC ++ G C G C Y+H+
Sbjct: 116 KPAFKSQDCPWYD--QGFCKDGPLCKYRHV 143
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 131 RSICSFAAAGNCPRGEKC 148
R +C G CP G KC
Sbjct: 145 RIMCLNYLVGFCPEGPKC 162
>MGI|MGI:1926001 [details] [associations]
symbol:Zc3h6 "zinc finger CCCH type containing 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:1926001 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5084 EMBL:AL833780 GeneTree:ENSGT00530000063288
HOGENOM:HOG000231733 HOVERGEN:HBG063914 OrthoDB:EOG4CG081
EMBL:AK014766 EMBL:AK039171 EMBL:BC043311 EMBL:BC058173
IPI:IPI00108263 IPI:IPI00761322 UniGene:Mm.26377
ProteinModelPortal:Q8BYK8 SMR:Q8BYK8 PhosphoSite:Q8BYK8
PRIDE:Q8BYK8 Ensembl:ENSMUST00000110319 UCSC:uc008mha.2
InParanoid:Q8BYK8 Bgee:Q8BYK8 CleanEx:MM_ZC3H6
Genevestigator:Q8BYK8 GermOnline:ENSMUSG00000042851 Uniprot:Q8BYK8
Length = 1177
Score = 147 (56.8 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+HC+F+HD + + +C YY +G+C+ G C Y H
Sbjct: 275 ICKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH 323
Score = 47 (21.6 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGD 154
C F +G C +G+KC H D
Sbjct: 328 CKFYHSGAKCYQGDKCKFSHDD 349
>UNIPROTKB|E1C259 [details] [associations]
symbol:ZC3H6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:IRPQYSD
EMBL:AADN02044292 IPI:IPI00570793 Ensembl:ENSGALT00000013458
Uniprot:E1C259
Length = 1189
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KGE C+F HD + + IC +Y +G+C+ G C Y H
Sbjct: 268 ICKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLH 316
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/106 (28%), Positives = 41/106 (38%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGD-TCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALRR 191
C F G C +G+KC H T T K+ L E E + +K LE LR+
Sbjct: 321 CKFYHTGAKCYQGDKCKFSHAPLTAET--KELLDKVLNNEEEPQ----NEDEKELEELRK 374
Query: 192 SQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSS 237
+ V PT AE+ +PF S I N++ S
Sbjct: 375 RGIVPLPKPPPGVGLLPTPAEQ---------YPFSESDIENYQDPS 411
>MGI|MGI:2682314 [details] [associations]
symbol:Zc3h4 "zinc finger CCCH-type containing 4"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:2682314
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:NOG245027
CTD:23211 HOGENOM:HOG000231733 HOVERGEN:HBG108366 OrthoDB:EOG4Z62N1
EMBL:AC148972 EMBL:AK129275 IPI:IPI00625723 IPI:IPI00750931
RefSeq:NP_941033.2 UniGene:Mm.333594 UniGene:Mm.490954
ProteinModelPortal:Q6ZPZ3 SMR:Q6ZPZ3 STRING:Q6ZPZ3
PhosphoSite:Q6ZPZ3 PaxDb:Q6ZPZ3 PRIDE:Q6ZPZ3 GeneID:330474
KEGG:mmu:330474 UCSC:uc009fht.1 UCSC:uc012fah.1 InParanoid:Q6ZPZ3
NextBio:399395 CleanEx:MM_ZC3H4 Genevestigator:Q6ZPZ3
GermOnline:ENSMUSG00000059273 Uniprot:Q6ZPZ3
Length = 1304
Score = 137 (53.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEH 53
+V+CK+F G C G+HC FSHD + P +C +Y GFC+ C Y H
Sbjct: 392 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 442
Score = 54 (24.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/74 (29%), Positives = 29/74 (39%)
Query: 87 MPELSALSRPFLPPN-KTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRG 145
+P+ LSR N T E + + D PR KPAD + + AA CP
Sbjct: 1045 LPDFELLSRILKTVNVNTPGQSEKPSDPRVRKTPTD-PRLQKPAD-PVAASRAAKPCPTE 1102
Query: 146 EKCPHIH--GDTCP 157
P GD+ P
Sbjct: 1103 ASPPAASPSGDSSP 1116
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
CK ++ GNC G C + H
Sbjct: 447 CKLYHT-TGNCINGDDCMFSH 466
>UNIPROTKB|D4A5G7 [details] [associations]
symbol:LOC678741 "Protein LOC678741" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:23211 IPI:IPI00950508 RefSeq:XP_001053214.2
Ensembl:ENSRNOT00000065122 GeneID:678741 KEGG:rno:678741
ArrayExpress:D4A5G7 Uniprot:D4A5G7
Length = 1255
Score = 137 (53.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEH 53
+V+CK+F G C G+HC FSHD + P +C +Y GFC+ C Y H
Sbjct: 343 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 393
Score = 52 (23.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 23/74 (31%), Positives = 28/74 (37%)
Query: 87 MPELSALSRPFLPPN-KTAWNPESVCNDSLENDEVDEPRNLKPADRSICSFAAAGNCPRG 145
+P+ LSR N T E + + D PR KPAD S AA CP
Sbjct: 997 LPDFELLSRILKTVNVNTPGQSEKPSDPRVRKTPTD-PRLQKPADPGAAS-RAAKPCPTE 1054
Query: 146 EKCPHIH--GDTCP 157
P GD+ P
Sbjct: 1055 ASPPAASPSGDSPP 1068
Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
CK ++ GNC G C + H
Sbjct: 398 CKLYHT-TGNCINGDDCMFSH 417
>POMBASE|SPCC1739.01 [details] [associations]
symbol:SPCC1739.01 "zf-CCCH type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 PomBase:SPCC1739.01
GO:GO:0005829 EMBL:CU329672 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5084 InterPro:IPR026290 PANTHER:PTHR11224
OrthoDB:EOG49S9H4 PIR:T41213 RefSeq:NP_588409.2
ProteinModelPortal:O74463 EnsemblFungi:SPCC1739.01.1 GeneID:2539315
KEGG:spo:SPCC1739.01 NextBio:20800480 Uniprot:O74463
Length = 547
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/116 (29%), Positives = 47/116 (40%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXX 62
+ V CKFF +G C GE+C FSH + IC Y+ KG C +G +C H P
Sbjct: 43 QHVPCKFFRNGTCTAGENCPFSHSL-ETERPICKYFLKGNCKFGPKCALSHALPGNTNLP 101
Query: 63 XXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFLPPNKTAWNPESVCNDSLEND 118
G + V + +S P L +KT NP N++ D
Sbjct: 102 NGTSTNTMASMAANG-GASSVASKQMGANQIS-PSLS-SKTMKNPADKANNTTATD 154
>UNIPROTKB|F1SUA3 [details] [associations]
symbol:ZC3H6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:IRPQYSD
EMBL:CU856034 EMBL:CU915661 Ensembl:ENSSSCT00000008869
Uniprot:F1SUA3
Length = 1185
Score = 134 (52.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+ C+F HD + + IC +Y +G+C+ G C Y H
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH 325
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALRR 191
C F +G C +G+ C H D K+ L E EEH E++ LE LR+
Sbjct: 330 CKFYHSGAKCYQGDNCKFSHDDLTKET-KKLLDKVLNTE-EEHANEDERE---LEELRK 383
>UNIPROTKB|B7Z7B0 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation-specificity
factor subunit 4" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098
Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343
SMART:SM00356 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000212457
HOVERGEN:HBG051108 OrthoDB:EOG4KH2VQ UniGene:Hs.489287
HGNC:HGNC:2327 EMBL:AC073063 EMBL:AK301745 IPI:IPI00924476
SMR:B7Z7B0 STRING:B7Z7B0 Ensembl:ENST00000441580 UCSC:uc011kix.2
Uniprot:B7Z7B0
Length = 191
Score = 108 (43.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 11 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 64
Score = 101 (40.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHVK 55
M+K C F++ G C E C F H DP + I C +Y +GFC +G CR+ H +
Sbjct: 37 MTKMPECYFYSKFGECSNKE-CPFLHI--DPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 92 RVICVNYLVGFCPEGPSCKFMH 113
Score = 43 (20.2 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 97 NYLVGFCPEGPSCKFMH 113
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 71 CPWYDRGFCKHGPLCRHRH 89
>UNIPROTKB|F1MCW9 [details] [associations]
symbol:ZC3H6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:IRPQYSD
EMBL:DAAA02030058 EMBL:DAAA02030059 EMBL:DAAA02030060
EMBL:DAAA02030061 IPI:IPI00710219 Ensembl:ENSBTAT00000027514
Uniprot:F1MCW9
Length = 1169
Score = 134 (52.2 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+ C+F HD + + IC +Y +G+C+ G C Y H
Sbjct: 268 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH 316
Score = 50 (22.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGDTCPTCGKQCLHPFRPEER-EEHMKSCEKKQKH 185
C F +G C +G+ C H D K EE E + E+ +KH
Sbjct: 321 CKFYHSGAKCYQGDNCKFSHDDLTKETKKLLDKVLNTEEAANEDERELEELRKH 374
>UNIPROTKB|I3LVF0 [details] [associations]
symbol:I3LVF0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00390000009627 EMBL:CU655901
Ensembl:ENSSSCT00000025766 OMA:REGSSAH Uniprot:I3LVF0
Length = 438
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 3 KRVLCKFFAHGACLKGEH-CEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHV 54
K +C F G C K + C FSH +C+Y+ KG CS S C Y HV
Sbjct: 194 KVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICS-NSNCPYSHV 245
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/138 (23%), Positives = 54/138 (39%)
Query: 110 VCNDSLENDEVDEPRNLKPADRSIC-SFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFR 168
VC D L+ K +C F+ G CPRG +C +H + G++ P
Sbjct: 253 VCTDFLKG-YCPLGAKCKKKHTLLCPDFSRRGVCPRGTQCQLLHRNR-KRLGRRAATPTA 310
Query: 169 PEEREEHMKSCEKKQKHLEALRRSQEIECSVCLDRVLS-KPTAAERKFGLLSECDHPFCI 227
PE R S +K A R +++ S + S P ++ R S P
Sbjct: 311 PEPRSRASTS-HGPRKSSGAQRPARQTTSSPTAEAAGSASPPSSPRVLPAASSSPSP--- 366
Query: 228 SCIRNWRSSSPTSGMDVN 245
C S+SP++ + ++
Sbjct: 367 -CSPPSASASPSASLSLD 383
>UNIPROTKB|E2RSL2 [details] [associations]
symbol:ZC3H4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:SPNGRPM
EMBL:AAEX03000841 EMBL:AAEX03000842 EMBL:AAEX03000843
EMBL:AAEX03000844 EMBL:AAEX03000845 EMBL:AAEX03000846
EMBL:AAEX03000847 Ensembl:ENSCAFT00000006714 Uniprot:E2RSL2
Length = 1282
Score = 137 (53.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEH 53
+V+CK+F G C G+HC FSHD + P +C +Y GFC+ C Y H
Sbjct: 394 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 444
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 87 MPELSALSRPFLPPNKTAWNPESVCNDSLENDEV----DEPRNLKPADRSICSFAA 138
+P+ LSR N T + +D + V +PR KPAD + S AA
Sbjct: 1016 LPDFELLSRILKTVNATGPSAAPGSSDKPSDPRVRKAPTDPRLQKPADSAASSRAA 1071
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
CK ++ GNC G C + H
Sbjct: 449 CKLYHT-TGNCINGDDCMFSH 468
Score = 38 (18.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 270 TPEEKQEIIDSYKSKLKSI 288
+P++ Q+ D Y SK+ S+
Sbjct: 539 SPQQLQQQQDMYTSKIPSL 557
>UNIPROTKB|F1PWF3 [details] [associations]
symbol:ZC3H6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:IRPQYSD
EMBL:AAEX03010906 Ensembl:ENSCAFT00000011475 Uniprot:F1PWF3
Length = 1166
Score = 134 (52.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+ C+F HD + + IC +Y +G+C+ G C Y H
Sbjct: 267 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH 315
Score = 47 (21.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALRR 191
C F +G C +G+ C H D K+ L E E + + ++ LE LR+
Sbjct: 320 CKFYHSGAKCYQGDNCKFSHDDLTKET-KKLLDKVLNTEEE----AINEDERELEELRK 373
>UNIPROTKB|E2RBM0 [details] [associations]
symbol:CPSF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00390000009627 EMBL:AAEX03004276
Ensembl:ENSCAFT00000023887 NextBio:20862973 Uniprot:E2RBM0
Length = 164
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 62 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 115
Score = 101 (40.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHVK 55
M+K C F++ G C E C F H DP + I C +Y +GFC +G CR+ H +
Sbjct: 88 MTKMPECYFYSKFGECSNKE-CPFLHI--DPESKIKDCPWYDRGFCKHGPLCRHRHTR 142
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 131 RSICSFAAAGNCPRGEKC 148
R IC G CP G C
Sbjct: 143 RVICVNYLVGFCPEGPSC 160
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 122 CPWYDRGFCKHGPLCRHRH 140
>MGI|MGI:1930128 [details] [associations]
symbol:Zc3h8 "zinc finger CCCH type containing 8"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033085 "negative
regulation of T cell differentiation in thymus" evidence=ISO]
[GO:0043029 "T cell homeostasis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0046677 "response to antibiotic" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0070245 "positive regulation
of thymocyte apoptotic process" evidence=ISO] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1930128
GO:GO:0005634 GO:GO:0006915 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003723 GO:GO:0070245 GO:GO:0043029
GO:GO:0033085 GeneTree:ENSGT00530000063288 CTD:84524
eggNOG:NOG287629 HOGENOM:HOG000231732 HOVERGEN:HBG057407
OMA:PKKFRHS OrthoDB:EOG454907 EMBL:AF061961 EMBL:BC048687
IPI:IPI00330691 RefSeq:NP_065619.2 UniGene:Mm.11675
ProteinModelPortal:Q9JJ48 SMR:Q9JJ48 PhosphoSite:Q9JJ48
PRIDE:Q9JJ48 Ensembl:ENSMUST00000028866 GeneID:57432 KEGG:mmu:57432
InParanoid:Q9JJ48 NextBio:313802 Bgee:Q9JJ48 CleanEx:MM_ZC3H8
Genevestigator:Q9JJ48 GermOnline:ENSMUSG00000027387 Uniprot:Q9JJ48
Length = 305
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C YY +G+C+ G C Y H
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLH 258
>RGD|1310458 [details] [associations]
symbol:Zc3h8 "zinc finger CCCH type containing 8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0033085 "negative regulation of T cell
differentiation in thymus" evidence=IEA;ISO] [GO:0043029 "T cell
homeostasis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046677 "response
to antibiotic" evidence=IEA;ISO] [GO:0070245 "positive regulation
of thymocyte apoptotic process" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1310458 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270 GO:GO:0046677
GO:GO:0003700 GO:GO:0070245 GO:GO:0043029 EMBL:CH473949
GO:GO:0033085 GeneTree:ENSGT00530000063288 CTD:84524
eggNOG:NOG287629 HOGENOM:HOG000231732 HOVERGEN:HBG057407
OrthoDB:EOG454907 EMBL:BC079122 IPI:IPI00464661
RefSeq:NP_001012090.1 UniGene:Rn.137486 SMR:Q6AYB0
Ensembl:ENSRNOT00000023845 GeneID:311414 KEGG:rno:311414
UCSC:RGD:1310458 InParanoid:Q6AYB0 NextBio:663570
Genevestigator:Q6AYB0 Uniprot:Q6AYB0
Length = 305
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C YY +G+C+ G C Y H
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLH 258
>UNIPROTKB|Q9UPT8 [details] [associations]
symbol:ZC3H4 "Zinc finger CCCH domain-containing protein 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:NOG245027
EMBL:AB028987 EMBL:AL050155 IPI:IPI00187011 PIR:T08781
RefSeq:NP_055983.1 UniGene:Hs.104661 PDB:2CQE PDBsum:2CQE
ProteinModelPortal:Q9UPT8 SMR:Q9UPT8 IntAct:Q9UPT8
PhosphoSite:Q9UPT8 DMDM:94707996 PaxDb:Q9UPT8 PRIDE:Q9UPT8
Ensembl:ENST00000253048 GeneID:23211 KEGG:hsa:23211 UCSC:uc002pga.4
CTD:23211 GeneCards:GC19M047569 HGNC:HGNC:17808 HPA:HPA040934
HPA:HPA041068 neXtProt:NX_Q9UPT8 PharmGKB:PA162409534
HOGENOM:HOG000231733 HOVERGEN:HBG108366 InParanoid:Q9UPT8
OMA:SPNGRPM OrthoDB:EOG4Z62N1 ChiTaRS:ZC3H4
EvolutionaryTrace:Q9UPT8 GenomeRNAi:23211 NextBio:44759
PMAP-CutDB:Q9UPT8 Bgee:Q9UPT8 CleanEx:HS_ZC3H4
Genevestigator:Q9UPT8 GermOnline:ENSG00000130749 Uniprot:Q9UPT8
Length = 1303
Score = 137 (53.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEH 53
+V+CK+F G C G+HC FSHD + P +C +Y GFC+ C Y H
Sbjct: 393 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 443
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
CK ++ GNC G C + H
Sbjct: 448 CKLYHT-TGNCINGDDCMFSH 467
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 87 MPELSALSRPFLPPNKTAWNPESVCNDSLENDEV----DEPRNLKPADRSICSFAA 138
+P+ LSR N T + +D + V +PR KP D + S AA
Sbjct: 1040 LPDFELLSRILKTVNATGSSAAPGSSDKPSDPRVRKAPTDPRLQKPTDSTASSRAA 1095
>UNIPROTKB|E1BHZ4 [details] [associations]
symbol:ZC3H4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063288 OMA:SPNGRPM
EMBL:DAAA02047406 EMBL:DAAA02047407 IPI:IPI00699712
Ensembl:ENSBTAT00000012237 Uniprot:E1BHZ4
Length = 1305
Score = 137 (53.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEH 53
+V+CK+F G C G+HC FSHD + P +C +Y GFC+ C Y H
Sbjct: 391 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 441
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
CK ++ GNC G C + H
Sbjct: 446 CKLYHT-TGNCINGDDCMFSH 465
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 94 (38.1 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 3 KRVLCKFFAH-GACLKGEHCEFSHDWKD---PPNN------IC-TYYQKGFCSYGSRCRY 51
K LC +A G C E C+F+H D P + +C TY+ G+C YG+RC +
Sbjct: 61 KTELCSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTELCRTYHTAGYCVYGTRCLF 120
Query: 52 EH 53
H
Sbjct: 121 VH 122
Score = 63 (27.2 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 122 EPRNLKPADRSI-C-SFAAAGNCPRGEKCPHIH 152
E R ++P R++ C +F A G CP G +C +H
Sbjct: 126 EQRPIRPRRRNVPCRTFRAFGVCPFGNRCHFLH 158
Score = 60 (26.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 282 KSKLKSIDCKHFNFGNGNCPFGTSCFYKHMVKPGS 316
+ + +++ C+ F G CPFG C + H V+ GS
Sbjct: 131 RPRRRNVPCRTFR-AFGVCPFGNRCHFLH-VEGGS 163
Score = 44 (20.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 290 CKHFNFGNGNCPFGTSCFYKH 310
C+ F+ G C +GT C ++H
Sbjct: 190 CRTFS-AFGFCLYGTRCRFQH 209
>UNIPROTKB|Q8N5P1 [details] [associations]
symbol:ZC3H8 "Zinc finger CCCH domain-containing protein 8"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0070245 "positive
regulation of thymocyte apoptotic process" evidence=IMP]
[GO:0046677 "response to antibiotic" evidence=IDA] [GO:0033085
"negative regulation of T cell differentiation in thymus"
evidence=IMP] [GO:0043029 "T cell homeostasis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006915 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003723 GO:GO:0070245 GO:GO:0043029
GO:GO:0033085 EMBL:AF334161 EMBL:BC032001 IPI:IPI00307760
RefSeq:NP_115883.2 UniGene:Hs.418416 ProteinModelPortal:Q8N5P1
SMR:Q8N5P1 IntAct:Q8N5P1 PhosphoSite:Q8N5P1 DMDM:47117585
PaxDb:Q8N5P1 PRIDE:Q8N5P1 DNASU:84524 Ensembl:ENST00000272570
Ensembl:ENST00000409573 GeneID:84524 KEGG:hsa:84524 UCSC:uc021vmw.1
CTD:84524 GeneCards:GC02M112973 H-InvDB:HIX0002377 HGNC:HGNC:30941
HPA:HPA034804 neXtProt:NX_Q8N5P1 PharmGKB:PA134956342
eggNOG:NOG287629 HOGENOM:HOG000231732 HOVERGEN:HBG057407
InParanoid:Q8N5P1 OMA:PKKFRHS OrthoDB:EOG454907 GenomeRNAi:84524
NextBio:74347 ArrayExpress:Q8N5P1 Bgee:Q8N5P1 CleanEx:HS_ZC3H8
Genevestigator:Q8N5P1 GermOnline:ENSG00000144161 Uniprot:Q8N5P1
Length = 291
Score = 124 (48.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C +Y +G+C+ G C Y H
Sbjct: 196 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 244
>SGD|S000006311 [details] [associations]
symbol:YTH1 "Essential RNA-binding component of cleavage and
polyadenylation factor" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IDA] [GO:0006379 "mRNA
cleavage" evidence=IMP;IDA;TAS] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP;TAS] InterPro:IPR000571 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00356 SGD:S000006311 GO:GO:0046872
GO:GO:0008270 GO:GO:0006378 GO:GO:0003723 EMBL:BK006949
eggNOG:COG5084 GO:GO:0005847 GO:GO:0006379 EMBL:U32445
HOGENOM:HOG000212457 GeneTree:ENSGT00390000009627 KO:K14404
OMA:DPDRPVC OrthoDB:EOG4PG99D EMBL:AY558061 PIR:S59772
RefSeq:NP_015432.1 ProteinModelPortal:Q06102 SMR:Q06102
DIP:DIP-2028N IntAct:Q06102 MINT:MINT-375481 STRING:Q06102
PaxDb:Q06102 PeptideAtlas:Q06102 EnsemblFungi:YPR107C GeneID:856222
KEGG:sce:YPR107C CYGD:YPR107c NextBio:981453 Genevestigator:Q06102
GermOnline:YPR107C Uniprot:Q06102
Length = 208
Score = 105 (42.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 4 RVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
+++C+ + G C K + CE+ H++ C ++ K G+C+ C+Y H+ P
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDP 117
Score = 52 (23.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 294 NFGNGNCPFGTSCFYKHMVK 313
N+ G CP G+SC +H+ K
Sbjct: 126 NYEMGFCPLGSSCPRRHIKK 145
Score = 48 (22.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 125 NLKPADR-SICSFAAAGNCPRGEKCPHIH 152
++ PA + C G CP G CP H
Sbjct: 114 HIDPASKIPKCENYEMGFCPLGSSCPRRH 142
>UNIPROTKB|Q17QY2 [details] [associations]
symbol:ZC3H8 "Zinc finger CCCH-type containing 8"
species:9913 "Bos taurus" [GO:0070245 "positive regulation of
thymocyte apoptotic process" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0033085 "negative regulation of T cell
differentiation in thymus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0046677 GO:GO:0003700 GO:GO:0070245
GO:GO:0043029 GO:GO:0033085 GeneTree:ENSGT00530000063288 CTD:84524
eggNOG:NOG287629 HOGENOM:HOG000231732 HOVERGEN:HBG057407
OMA:PKKFRHS OrthoDB:EOG454907 EMBL:DAAA02030062 EMBL:BC118120
IPI:IPI00685661 RefSeq:NP_001068759.1 UniGene:Bt.29569 SMR:Q17QY2
Ensembl:ENSBTAT00000021230 GeneID:506983 KEGG:bta:506983
InParanoid:Q17QY2 NextBio:20867839 Uniprot:Q17QY2
Length = 303
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C +Y +G+C+ G C Y H
Sbjct: 209 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 257
>UNIPROTKB|F1SUA1 [details] [associations]
symbol:ZC3H8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070245 "positive regulation of thymocyte apoptotic
process" evidence=IEA] [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043029 "T cell homeostasis" evidence=IEA]
[GO:0033085 "negative regulation of T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0046677 GO:GO:0003700 GO:GO:0070245 GO:GO:0043029
GO:GO:0033085 GeneTree:ENSGT00530000063288 OMA:PKKFRHS
EMBL:FP326709 Ensembl:ENSSSCT00000008872 Uniprot:F1SUA1
Length = 307
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C +Y +G+C+ G C Y H
Sbjct: 213 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 261
>SGD|S000005975 [details] [associations]
symbol:LEE1 "Zinc-finger protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 SGD:S000005975 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:BK006949 EMBL:U39205 eggNOG:COG5084
InterPro:IPR026290 PANTHER:PTHR11224 OrthoDB:EOG49S9H4 EMBL:X86735
EMBL:AY693073 PIR:S60936 RefSeq:NP_015271.1
ProteinModelPortal:Q02799 SMR:Q02799 STRING:Q02799
EnsemblFungi:YPL054W GeneID:856053 KEGG:sce:YPL054W CYGD:YPL054w
NextBio:981014 Genevestigator:Q02799 GermOnline:YPL054W
Uniprot:Q02799
Length = 301
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 5 VLCKFFAHGACLKGEHCEFSH--DWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKP 56
V CKFF G C G C FSH D NN+ C Y+ KG C +G++C HV P
Sbjct: 91 VPCKFFKMGNCQAGSSCPFSHSPDIISSANNLPCKYFAKGNCKFGNKCVNAHVLP 145
>UNIPROTKB|P61129 [details] [associations]
symbol:ZC3H6 "Zinc finger CCCH domain-containing protein 6"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:NOG245027 HOGENOM:HOG000231733 EMBL:AC115115 EMBL:AB111887
EMBL:BC155540 EMBL:BC167154 EMBL:AK123404 EMBL:AK127776
IPI:IPI00410656 RefSeq:NP_940983.2 UniGene:Hs.190477
ProteinModelPortal:P61129 SMR:P61129 PhosphoSite:P61129
DMDM:47117369 PaxDb:P61129 PRIDE:P61129 Ensembl:ENST00000343936
Ensembl:ENST00000409871 GeneID:376940 KEGG:hsa:376940
UCSC:uc002thq.1 CTD:376940 GeneCards:GC02P113033 HGNC:HGNC:24762
HPA:HPA036019 neXtProt:NX_P61129 PharmGKB:PA142670510
HOVERGEN:HBG063914 InParanoid:P61129 OMA:IRPQYSD OrthoDB:EOG4CG081
ChiTaRS:ZC3H6 GenomeRNAi:376940 NextBio:100656 ArrayExpress:P61129
Bgee:P61129 CleanEx:HS_ZC3H6 Genevestigator:P61129
GermOnline:ENSG00000188177 Uniprot:P61129
Length = 1189
Score = 134 (52.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F G C+KG+ C+F HD + + IC +Y +G+C+ G C Y H
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH 325
Score = 42 (19.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 134 CSFAAAG-NCPRGEKCPHIHGD 154
C F +G C +G+ C H D
Sbjct: 330 CKFYHSGAKCYQGDNCKFSHDD 351
>UNIPROTKB|O19137 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation specificity
factor subunit 4" species:9913 "Bos taurus" [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642
PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343 SMART:SM00356
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0003723
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5084 HSSP:P47974
GO:GO:0005847 HOGENOM:HOG000212457 HOVERGEN:HBG051108 EMBL:U96448
IPI:IPI00715166 RefSeq:NP_776367.1 UniGene:Bt.55595
ProteinModelPortal:O19137 SMR:O19137 STRING:O19137
Ensembl:ENSBTAT00000002701 GeneID:280875 KEGG:bta:280875 CTD:10898
GeneTree:ENSGT00390000009627 InParanoid:O19137 KO:K14404
OMA:PLDQVTC OrthoDB:EOG4KH2VQ NextBio:20805014 Uniprot:O19137
Length = 243
Score = 108 (43.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 124 CPWYDRGFCKHGPLCRHRH 142
>UNIPROTKB|I3LCK9 [details] [associations]
symbol:LOC100738395 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00390000009627 OMA:PLDQVTC EMBL:FP103031
Ensembl:ENSSSCT00000031676 Uniprot:I3LCK9
Length = 243
Score = 108 (43.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 38 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 91
Score = 48 (22.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 119 RVICVNYLVGFCPEGPSCKFMH 140
Score = 43 (20.2 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 124 NYLVGFCPEGPSCKFMH 140
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 98 CPWYDRGFCKHGPLCRHRH 116
>RGD|620440 [details] [associations]
symbol:Cpsf4 "cleavage and polyadenylation specific factor 4"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098
Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343
SMART:SM00356 RGD:620440 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5084
HSSP:P47974 GO:GO:0005847 HOGENOM:HOG000212457 HOVERGEN:HBG051108
CTD:10898 GeneTree:ENSGT00390000009627 KO:K14404 OrthoDB:EOG4KH2VQ
EMBL:BC089824 IPI:IPI00553898 RefSeq:NP_001012351.1
UniGene:Rn.104788 ProteinModelPortal:Q5FVR7 SMR:Q5FVR7
Ensembl:ENSRNOT00000042474 GeneID:304277 KEGG:rno:304277
InParanoid:Q5FVR7 NextBio:652764 ArrayExpress:Q5FVR7
Genevestigator:Q5FVR7 GermOnline:ENSRNOG00000025217 Uniprot:Q5FVR7
Length = 243
Score = 108 (43.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 124 CPWYDRGFCKHGPLCRHRH 142
>ZFIN|ZDB-GENE-990415-180 [details] [associations]
symbol:cpsf4 "cleavage and polyadenylation specific
factor 4" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356
ZFIN:ZDB-GENE-990415-180 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5084 GO:GO:0042462
HOGENOM:HOG000212457 HOVERGEN:HBG051108 CTD:10898 KO:K14404
OrthoDB:EOG4KH2VQ EMBL:U70479 EMBL:BC045289 IPI:IPI00630205
RefSeq:NP_571084.1 UniGene:Dr.75095 SMR:Q98881 STRING:Q98881
GeneID:30203 KEGG:dre:30203 InParanoid:Q98881 NextBio:20806666
Uniprot:Q98881
Length = 271
Score = 108 (43.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 101 (40.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHVK 55
M+K C F++ G C E C F H DP + I C +Y +GFC +G CR+ H +
Sbjct: 90 MTKMPECYFYSKFGECSNKE-CPFLHI--DPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
Score = 52 (23.4 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALR 190
R IC G CP G+ C +H G P P++ + ++KQ++++ +
Sbjct: 145 RVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPPL-PQQVQT-----QQKQQNMQPIN 198
Query: 191 RSQE 194
RS +
Sbjct: 199 RSSQ 202
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 282 KSKLKSIDCKHFNFGNGNCPFGTSCFYKH 310
+SK+K DC ++ G C G C ++H
Sbjct: 118 ESKIK--DCPWYD--RGFCKHGPDCRHRH 142
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 289 DCKH--------FNFGNGNCPFGTSCFYKH 310
DC+H N+ G CP G SC + H
Sbjct: 137 DCRHRHTRRVICVNYLVGFCPEGKSCKFMH 166
>UNIPROTKB|E2RFS8 [details] [associations]
symbol:ZC3H8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070245 "positive regulation of thymocyte
apoptotic process" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0033085 "negative regulation of T cell
differentiation in thymus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0046677 GO:GO:0003700 GO:GO:0070245
GO:GO:0043029 GO:GO:0033085 GeneTree:ENSGT00530000063288
EMBL:AAEX03010906 Ensembl:ENSCAFT00000011466 OMA:ECERIPK
NextBio:20857524 Uniprot:E2RFS8
Length = 393
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEH 53
+CK+F C+KG+ C+F HD + + +C +Y +G+C+ G C Y H
Sbjct: 299 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 347
>DICTYBASE|DDB_G0270148 [details] [associations]
symbol:cpsf4 "cleavage and polyadenylation
specificity factor 30 kDa subunit" species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356 dictyBase:DDB_G0270148
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006378 GO:GO:0003723 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5084 GO:GO:0005847 GO:GO:0006379
KO:K14404 RefSeq:XP_646578.1 ProteinModelPortal:Q55CA3 SMR:Q55CA3
STRING:Q55CA3 EnsemblProtists:DDB0233701 GeneID:8617548
KEGG:ddi:DDB_G0270148 InParanoid:Q55CA3 OMA:ECMYLHV
ProtClustDB:CLSZ2437480 Uniprot:Q55CA3
Length = 372
Score = 111 (44.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 1 MSKRVLCKFFA-HGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
+ K C FF+ HG C + C + H + C +Y +GFC +G +CR++H+K
Sbjct: 87 LQKMPECYFFSKHGEC-NNQECMYLHVNPEEKVRECPWYSRGFCKHGPKCRHKHIK 141
Score = 104 (41.7 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
+ V+CK + G C KGE CEF H++ C ++ K G C+ C Y HV P
Sbjct: 61 RAVVCKHWLRGLCKKGELCEFLHEYDLQKMPECYFFSKHGECN-NQECMYLHVNP 114
Score = 101 (40.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 6 LCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEH 53
+C+FF G+C KG C + H K +C ++ +G C G C + H
Sbjct: 37 ICRFFLKGSCTKGSDCPYKHT-KAERAVVCKHWLRGLCKKGELCEFLH 83
Score = 48 (22.0 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + + G C G KC H H
Sbjct: 121 CPWYSRGFCKHGPKCRHKH 139
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 127 KPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHL 186
K + +C G CP G KC + H P K L PE++ + E +Q+
Sbjct: 138 KHIKKLLCENYYLGFCPEGPKCKYGH----P---KYELPKEEPEKKVNIQEQFEMEQQQQ 190
Query: 187 EALRRSQ 193
+ ++ Q
Sbjct: 191 QQQQQQQ 197
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 285 LKSIDCKHFNFGNGNCPFGTSCFYKH 310
+K + C+ N+ G CP G C Y H
Sbjct: 140 IKKLLCE--NYYLGFCPEGPKCKYGH 163
>UNIPROTKB|D4A905 [details] [associations]
symbol:Cpsf4 "Cleavage and polyadenylation-specificity
factor subunit 4" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098
Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343
SMART:SM00356 RGD:620440 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00390000009627
OMA:PLDQVTC OrthoDB:EOG4KH2VQ IPI:IPI00358639
Ensembl:ENSRNOT00000038958 Uniprot:D4A905
Length = 243
Score = 108 (43.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
>UNIPROTKB|J9P398 [details] [associations]
symbol:CPSF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
CTD:10898 GeneTree:ENSGT00390000009627 KO:K14404 OMA:PLDQVTC
EMBL:AAEX03004276 RefSeq:XP_850149.1 ProteinModelPortal:J9P398
Ensembl:ENSCAFT00000043832 GeneID:489859 KEGG:cfa:489859
Uniprot:J9P398
Length = 269
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 124 CPWYDRGFCKHGPLCRHRH 142
>UNIPROTKB|O95639 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation specificity
factor subunit 4" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0019048
"virus-host interaction" evidence=TAS] [GO:0019054 "modulation by
virus of host cellular process" evidence=TAS] [GO:0019058 "viral
infectious cycle" evidence=TAS] [GO:0046778 "modification by virus
of host mRNA processing" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000571 InterPro:IPR001878
Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158
SMART:SM00343 SMART:SM00356 GO:GO:0005739 Reactome:REACT_116125
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0003723
EMBL:CH236956 EMBL:CH471091 GO:GO:0019058 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5084 GO:GO:0005847 HOGENOM:HOG000212457
HOVERGEN:HBG051108 CTD:10898 KO:K14404 OMA:PLDQVTC
OrthoDB:EOG4KH2VQ EMBL:U79569 EMBL:CR542161 EMBL:EF191081
EMBL:BC003101 EMBL:BC050738 IPI:IPI00009137 IPI:IPI00029707
IPI:IPI00375469 RefSeq:NP_001075028.1 RefSeq:NP_006684.1
UniGene:Hs.489287 PDB:2D9N PDB:2RHK PDBsum:2D9N PDBsum:2RHK
ProteinModelPortal:O95639 SMR:O95639 DIP:DIP-48675N IntAct:O95639
MINT:MINT-1429837 STRING:O95639 PhosphoSite:O95639 PaxDb:O95639
PRIDE:O95639 DNASU:10898 Ensembl:ENST00000292476
Ensembl:ENST00000436336 GeneID:10898 KEGG:hsa:10898 UCSC:uc003uqi.3
UCSC:uc003uqj.3 UCSC:uc003uqk.3 GeneCards:GC07P099036
HGNC:HGNC:2327 HPA:HPA049094 MIM:603052 neXtProt:NX_O95639
PharmGKB:PA26844 InParanoid:O95639 PhylomeDB:O95639
EvolutionaryTrace:O95639 GenomeRNAi:10898 NextBio:41385
ArrayExpress:O95639 Bgee:O95639 CleanEx:HS_CPSF4
Genevestigator:O95639 GermOnline:ENSG00000160917 GO:GO:0046778
Uniprot:O95639
Length = 269
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 124 CPWYDRGFCKHGPLCRHRH 142
>UNIPROTKB|E1BV31 [details] [associations]
symbol:CPSF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642
PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343 SMART:SM00356
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0005847 CTD:10898
GeneTree:ENSGT00390000009627 KO:K14404 OMA:PLDQVTC
EMBL:AADN02023770 IPI:IPI00572429 RefSeq:XP_414800.1
UniGene:Gga.12217 Ensembl:ENSGALT00000007510 GeneID:416494
KEGG:gga:416494 NextBio:20819939 Uniprot:E1BV31
Length = 243
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPTCKFMH 166
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G +C + H
Sbjct: 150 NYLVGFCPEGPTCKFMH 166
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 134 CSFAAAGNCPRGEKCPHIH 152
C + G C G C H H
Sbjct: 124 CPWYDRGFCKHGPLCRHRH 142
>FB|FBgn0015621 [details] [associations]
symbol:Clp "Clipper" species:7227 "Drosophila melanogaster"
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0006378
"mRNA polyadenylation" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000571
InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356 GO:GO:0022008
GO:GO:0046872 GO:GO:0008270 GO:GO:0006378 GO:GO:0003676
GO:GO:0004521 Gene3D:4.10.60.10 GO:GO:0005847 GO:GO:0006379
EMBL:U26549 ProteinModelPortal:Q24081 SMR:Q24081 STRING:Q24081
PRIDE:Q24081 FlyBase:FBgn0015621 InParanoid:Q24081
OrthoDB:EOG4XKSPS ArrayExpress:Q24081 Bgee:Q24081 Uniprot:Q24081
Length = 296
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 1 MSKRVLCKFFAH-GACLKGEHCEFSHDWKDPPNNI--CTYYQKGFCSYGSRCRYEHVK 55
M+K C F++ AC E C F H DP + + C +Y++GFC +G CR++H++
Sbjct: 92 MTKMPECYFYSRFNACHNKE-CPFLHI--DPQSKVKDCPWYKRGFCRHGPHCRHQHLR 146
Score = 98 (39.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKP 56
+ ++CK + G C KG+ CEF H++ C +Y + + C + H+ P
Sbjct: 66 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP 119
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHG--DTCPTC--GKQCLHPFRP 169
R +C AG CP C H+H + P GK LH P
Sbjct: 147 RVLCMDYLAGFCPEAPSCKHMHPHFELPPLAELGKDQLHKKLP 189
>UNIPROTKB|F1REX3 [details] [associations]
symbol:LOC100518830 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
PROSITE:PS50158 SMART:SM00343 SMART:SM00356 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00390000009627 KO:K14404 EMBL:FP102617
RefSeq:XP_003124350.1 Ensembl:ENSSSCT00000008355 GeneID:100518830
KEGG:ssc:100518830 OMA:MQDIVAS Uniprot:F1REX3
Length = 269
Score = 108 (43.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 145 RVICVNYLVGFCPEGPSCKFMH 166
Score = 43 (20.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 150 NYLVGFCPEGPSCKFMH 166
>UNIPROTKB|C9JEV9 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation-specificity
factor subunit 4" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642
PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343 SMART:SM00356
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000212457 HGNC:HGNC:2327 EMBL:AC073063 IPI:IPI00927478
ProteinModelPortal:C9JEV9 SMR:C9JEV9 STRING:C9JEV9
Ensembl:ENST00000451876 ArrayExpress:C9JEV9 Bgee:C9JEV9
Uniprot:C9JEV9
Length = 211
Score = 103 (41.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
K V+CK + G C KG+ CEF H++ C +Y K +G CR+ H +
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSK----FGPLCRHRHTR 112
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 113 RVICVNYLVGFCPEGPSCKFMH 134
Score = 43 (20.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 118 NYLVGFCPEGPSCKFMH 134
>MGI|MGI:1861602 [details] [associations]
symbol:Cpsf4 "cleavage and polyadenylation specific factor
4" species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642
PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343 SMART:SM00356
MGI:MGI:1861602 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5084
GO:GO:0005847 HOGENOM:HOG000212457 HOVERGEN:HBG051108 CTD:10898
GeneTree:ENSGT00390000009627 KO:K14404 OrthoDB:EOG4KH2VQ
EMBL:AK046064 EMBL:AF033201 EMBL:BC057067 IPI:IPI00309761
IPI:IPI00380450 IPI:IPI01027761 RefSeq:NP_848671.1
UniGene:Mm.196884 ProteinModelPortal:Q8BQZ5 SMR:Q8BQZ5
STRING:Q8BQZ5 PhosphoSite:Q8BQZ5 PaxDb:Q8BQZ5 PRIDE:Q8BQZ5
Ensembl:ENSMUST00000070487 GeneID:54188 KEGG:mmu:54188
UCSC:uc009amj.1 ChiTaRS:CPSF4 NextBio:311022 Bgee:Q8BQZ5
CleanEx:MM_CPSF4 Genevestigator:Q8BQZ5
GermOnline:ENSMUSG00000029625 Uniprot:Q8BQZ5
Length = 211
Score = 103 (41.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
K V+CK + G C KG+ CEF H++ C +Y K +G CR+ H +
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSK----FGPLCRHRHTR 112
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 113 RVICVNYLVGFCPEGPSCKFMH 134
Score = 43 (20.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 118 NYLVGFCPEGPSCKFMH 134
>UNIPROTKB|E2RBK7 [details] [associations]
symbol:CPSF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642
PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343 SMART:SM00356
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0005847 GeneTree:ENSGT00390000009627
EMBL:AAEX03004276 Ensembl:ENSCAFT00000023892 Uniprot:E2RBK7
Length = 212
Score = 103 (41.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
K V+CK + G C KG+ CEF H++ C +Y K +G CR+ H +
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSK----FGPLCRHRHTR 112
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 131 RSICSFAAAGNCPRGEKCPHIH 152
R IC G CP G C +H
Sbjct: 113 RVICVNYLVGFCPEGPSCKFMH 134
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 294 NFGNGNCPFGTSCFYKH 310
N+ G CP G SC + H
Sbjct: 118 NYLVGFCPEGPSCKFMH 134
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 190 RRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSSPTSGMDVNTALR 249
++ ++EC +C D V R+ + + C H FC+ CI SSS G V ++ R
Sbjct: 44 KKLSDVECPICFDEV--------RR-AITTSCGHVFCLECIERSISSSHARGQ-VRSSQR 93
Query: 250 A---CPICRKLSYF 260
CP+CRK F
Sbjct: 94 GRGLCPLCRKQVVF 107
>UNIPROTKB|H7C016 [details] [associations]
symbol:CPSF4 "Cleavage and polyadenylation-specificity
factor subunit 4" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:2327
EMBL:AC073063 ProteinModelPortal:H7C016 Ensembl:ENST00000452047
Bgee:H7C016 Uniprot:H7C016
Length = 229
Score = 108 (43.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 31 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 84
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 130 DRSICSFAAAGNCP-RGEKCPH 150
DR C A NCP PH
Sbjct: 95 DRGFCKHALDLNCPWEPPSSPH 116
>MGI|MGI:2663721 [details] [associations]
symbol:Zc3h3 "zinc finger CCCH type containing 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010793
"regulation of mRNA export from nucleus" evidence=ISO] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=ISO] [GO:0031124 "mRNA
3'-end processing" evidence=IDA] [GO:0032927 "positive regulation
of activin receptor signaling pathway" evidence=IGI] [GO:0046332
"SMAD binding" evidence=IPI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IDA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:2663721 GO:GO:0046872 GO:GO:0008270 GO:GO:0006378
GO:GO:0003676 GO:GO:0032927 eggNOG:COG5084 GO:GO:0070412
GO:GO:0005847 GeneTree:ENSGT00390000009627 GO:GO:0016973
GO:GO:0010793 CTD:23144 HOGENOM:HOG000133053 HOVERGEN:HBG055611
OMA:TSLPGDK OrthoDB:EOG40ZQX1 EMBL:AJ516034 EMBL:BC049953
EMBL:BC060682 IPI:IPI00742388 RefSeq:NP_742119.1 UniGene:Mm.209800
ProteinModelPortal:Q8CHP0 SMR:Q8CHP0 PhosphoSite:Q8CHP0
PRIDE:Q8CHP0 Ensembl:ENSMUST00000100538 GeneID:223642
KEGG:mmu:223642 InParanoid:Q8CHP0 NextBio:376766 Bgee:Q8CHP0
CleanEx:MM_ZC3H3 Genevestigator:Q8CHP0
GermOnline:ENSMUSG00000075600 Uniprot:Q8CHP0
Length = 950
Score = 103 (41.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 3 KRVLCKFFAHGACLKGE-HCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHV 54
K +C F G C K + C FSH +C+Y+ KG CS S C Y HV
Sbjct: 691 KVAVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICS-NSNCPYSHV 742
Score = 64 (27.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 26/95 (27%), Positives = 34/95 (35%)
Query: 133 ICSFAAAGNCPRGEKCPHIHGDTCPT------C--GKQCLHPFRPEEREEHMKSCEKKQK 184
+CS G CP G KC H CP C G QC R ++R +
Sbjct: 750 VCSDFLKGYCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRTAAPPIPG 809
Query: 185 HLEALRRSQEIECSVCLDRVLSKPTAAERKFGLLS 219
+ RS+ VL KPT +R +S
Sbjct: 810 PSDGAPRSK-----ASAGHVLRKPTTTQRSVRQMS 839
>UNIPROTKB|Q8IXZ2 [details] [associations]
symbol:ZC3H3 "Zinc finger CCCH domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010793 "regulation of mRNA export from nucleus" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0006378 GO:GO:0003676 eggNOG:COG5084 GO:GO:0016973
EMBL:AC067930 EMBL:AC105118 GO:GO:0010793 EMBL:BC034435
EMBL:BC038670 EMBL:D63484 IPI:IPI00384232 IPI:IPI00410013
RefSeq:NP_055932.2 UniGene:Hs.521915 ProteinModelPortal:Q8IXZ2
SMR:Q8IXZ2 IntAct:Q8IXZ2 STRING:Q8IXZ2 PhosphoSite:Q8IXZ2
DMDM:308153538 PaxDb:Q8IXZ2 PRIDE:Q8IXZ2 Ensembl:ENST00000262577
GeneID:23144 KEGG:hsa:23144 UCSC:uc003yyd.2 CTD:23144
GeneCards:GC08M144519 H-InvDB:HIX0022677 HGNC:HGNC:28972
HPA:HPA023658 neXtProt:NX_Q8IXZ2 PharmGKB:PA134933089
HOGENOM:HOG000133053 HOVERGEN:HBG055611 InParanoid:Q8IXZ2
OMA:TSLPGDK OrthoDB:EOG40ZQX1 PhylomeDB:Q8IXZ2 ChiTaRS:ZC3H3
GenomeRNAi:23144 NextBio:44434 Bgee:Q8IXZ2 CleanEx:HS_ZC3H3
Genevestigator:Q8IXZ2 GermOnline:ENSG00000014164 Uniprot:Q8IXZ2
Length = 948
Score = 102 (41.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 3 KRVLCKFFAHGACLKGEH-CEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHV 54
K +C F G C K + C FSH +C+Y+ KG CS S C Y HV
Sbjct: 696 KVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICS-NSNCPYSHV 747
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 25/89 (28%), Positives = 34/89 (38%)
Query: 133 ICSFAAAGNCPRGEKCPHIHGDTCP------TC--GKQCLHPFRPEEREEHMKSCEKKQK 184
+CS G CP G KC H CP C G QC R ++R +
Sbjct: 755 VCSDFLKGYCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPG 814
Query: 185 HLEALRRSQEIECSVCLDRVLSKPTAAER 213
+A RS+ V KP+A++R
Sbjct: 815 PSDATARSR-----VSASHGPRKPSASQR 838
>ASPGD|ASPL0000046029 [details] [associations]
symbol:AN1537 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:BN001307 GO:GO:0008270 GO:GO:0003676
EnsemblFungi:CADANIAT00008164 HOGENOM:HOG000158348 OMA:KVAICKD
Uniprot:C8VMX4
Length = 467
Score = 97 (39.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 2 SKRVLCK-FFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK 55
+K +CK F G C G C+ SH+ + C ++ +G CS CRY HV+
Sbjct: 297 NKVAICKDFLQTGKCSAGNSCDLSHEPSPHRSPACVHFLRGRCS-NPECRYAHVR 350
Score = 61 (26.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 133 IC-SFAAAGNCPRGEKCPHIHGDTCP 157
+C +FA G C +GE C H CP
Sbjct: 357 VCRAFATLGYCDKGETCEERHVHECP 382
>CGD|CAL0004807 [details] [associations]
symbol:orf19.7385 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 CGD:CAL0004807 GO:GO:0008270 GO:GO:0003676
EMBL:AACQ01000066 eggNOG:COG5084 InterPro:IPR026290
PANTHER:PTHR11224 RefSeq:XP_716626.1 ProteinModelPortal:Q5A4E9
GeneID:3641745 KEGG:cal:CaO19.7385 HOGENOM:HOG000093942
Uniprot:Q5A4E9
Length = 501
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 5 VLCKFFAHGACLKGEHCEFSHDWKDP--PNNI-CTYYQKGFCSYGSRCRYEHVKP 56
V CKFF G C G C FSH+ + + + C Y+QKG C +G +C H P
Sbjct: 114 VPCKFFKQGVCQAGNSCPFSHNLEGALGADKLPCKYFQKGNCKFGLKCALAHFLP 168
>UNIPROTKB|Q5A4E9 [details] [associations]
symbol:LEE1 "Putative uncharacterized protein LEE1"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 CGD:CAL0004807 GO:GO:0008270 GO:GO:0003676
EMBL:AACQ01000066 eggNOG:COG5084 InterPro:IPR026290
PANTHER:PTHR11224 RefSeq:XP_716626.1 ProteinModelPortal:Q5A4E9
GeneID:3641745 KEGG:cal:CaO19.7385 HOGENOM:HOG000093942
Uniprot:Q5A4E9
Length = 501
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 5 VLCKFFAHGACLKGEHCEFSHDWKDP--PNNI-CTYYQKGFCSYGSRCRYEHVKP 56
V CKFF G C G C FSH+ + + + C Y+QKG C +G +C H P
Sbjct: 114 VPCKFFKQGVCQAGNSCPFSHNLEGALGADKLPCKYFQKGNCKFGLKCALAHFLP 168
>UNIPROTKB|Q6DJP7 [details] [associations]
symbol:cpsf4 "Cleavage and polyadenylation specificity
factor subunit 4" species:8355 "Xenopus laevis" [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] InterPro:IPR000571 InterPro:IPR001878 Pfam:PF00098
Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158 SMART:SM00343
SMART:SM00356 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0005847
HOVERGEN:HBG051108 CTD:10898 KO:K14404 EMBL:BC075128
RefSeq:NP_001086337.1 UniGene:Xl.25683 ProteinModelPortal:Q6DJP7
SMR:Q6DJP7 GeneID:444766 KEGG:xla:444766 Xenbase:XB-GENE-948308
Uniprot:Q6DJP7
Length = 269
Score = 108 (43.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 41 (19.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALR 190
R IC G C G C +H G P P++ + ++KQ + + L+
Sbjct: 145 RVICVNYLVGFCIEGPNCKFMHPRFELPMGTAEQPPL-PQQTQN-----QQKQNNNQVLQ 198
Query: 191 RSQEI 195
RS +
Sbjct: 199 RSSSL 203
>UNIPROTKB|Q66KE3 [details] [associations]
symbol:cpsf4 "Cleavage and polyadenylation specificity
factor subunit 4" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR000571 InterPro:IPR001878
Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103 PROSITE:PS50158
SMART:SM00343 SMART:SM00356 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
eggNOG:COG5084 GO:GO:0042462 GO:GO:0005847 HOVERGEN:HBG051108
CTD:10898 KO:K14404 OrthoDB:EOG4KH2VQ EMBL:BC080440
RefSeq:NP_001007933.1 UniGene:Str.3196 ProteinModelPortal:Q66KE3
SMR:Q66KE3 STRING:Q66KE3 GeneID:493312 KEGG:xtr:493312
Xenbase:XB-GENE-948302 InParanoid:Q66KE3 Bgee:Q66KE3 Uniprot:Q66KE3
Length = 269
Score = 108 (43.1 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 3 KRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQK-GFCSYGSRCRYEHVKP 56
K V+CK + G C KG+ CEF H++ C +Y K G CS C + H+ P
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 117
Score = 40 (19.1 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 131 RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKQCLHPFRPEEREEHMKSCEKKQKHLEALR 190
R IC G C G C +H G P P++ + ++KQ + + L+
Sbjct: 145 RVICVNYLVGFCIEGPNCKFMHPRFELPMGTTEQPPL-PQQTQT-----QQKQNNNQVLQ 198
Query: 191 RSQEI 195
RS +
Sbjct: 199 RSSSL 203
>UNIPROTKB|F1NHU3 [details] [associations]
symbol:ZC3H3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0008270 GO:GO:0006378 GO:GO:0003676
GeneTree:ENSGT00390000009627 GO:GO:0016973 GO:GO:0010793
EMBL:AADN02037362 EMBL:AADN02037363 IPI:IPI00580233
Ensembl:ENSGALT00000028087 OMA:CNRGESC Uniprot:F1NHU3
Length = 377
Score = 99 (39.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 3 KRVLCKFFAHGACLKGE-HCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHV 54
K +C F G C K + C FSH +C+Y+ KG C+ S C Y HV
Sbjct: 138 KVAVCTRFLRGTCKKTDGKCPFSHKVSKDKMPVCSYFLKGICN-NSNCPYSHV 189
Score = 55 (24.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 110 VCNDSLENDEVDEPRNLKPADRSIC-SFAAAGNCPRGEKCPHIH 152
VC D L+ K +C FA G CPRG C +H
Sbjct: 197 VCQDFLKG-YCPMGEKCKKKHTLVCPDFAKKGICPRGACCKLLH 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.457 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 399 339 0.00094 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 109
No. of states in DFA: 625 (66 KB)
Total size of DFA: 298 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.58u 0.15s 30.73t Elapsed: 00:00:01
Total cpu time: 30.59u 0.15s 30.74t Elapsed: 00:00:01
Start: Thu May 9 17:25:10 2013 End: Thu May 9 17:25:11 2013
WARNINGS ISSUED: 1