Query 015862
Match_columns 399
No_of_seqs 189 out of 1339
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 03:49:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a3u_A NCR, NADH\:flavin oxido 100.0 1.6E-92 5.4E-97 703.2 35.0 355 29-389 1-357 (358)
2 4ab4_A Xenobiotic reductase B; 100.0 3.2E-90 1.1E-94 685.0 38.9 349 30-391 2-352 (362)
3 3gka_A N-ethylmaleimide reduct 100.0 4.8E-90 1.7E-94 683.5 38.9 349 28-389 8-358 (361)
4 2hsa_B 12-oxophytodienoate red 100.0 2.7E-87 9.3E-92 673.8 38.4 365 28-393 14-395 (402)
5 4gbu_A NADPH dehydrogenase 1; 100.0 5.1E-88 1.7E-92 680.0 30.9 358 30-391 15-392 (400)
6 3tjl_A NADPH dehydrogenase; OL 100.0 6E-88 2.1E-92 674.7 29.8 359 29-390 11-389 (407)
7 2r14_A Morphinone reductase; H 100.0 1.6E-86 5.5E-91 663.4 38.9 362 29-395 8-376 (377)
8 1icp_A OPR1, 12-oxophytodienoa 100.0 2.3E-86 8E-91 662.3 37.9 362 29-390 13-374 (376)
9 3aty_A Tcoye, prostaglandin F2 100.0 1.5E-85 5.3E-90 656.4 38.2 355 28-389 3-378 (379)
10 1vyr_A Pentaerythritol tetrani 100.0 3.5E-84 1.2E-88 644.4 38.2 356 29-388 2-364 (364)
11 2gou_A Oxidoreductase, FMN-bin 100.0 5.4E-84 1.8E-88 643.2 38.2 356 29-389 2-364 (365)
12 3kru_A NADH:flavin oxidoreduct 100.0 6.3E-84 2.2E-88 636.4 33.7 316 30-364 2-324 (343)
13 3gr7_A NADPH dehydrogenase; fl 100.0 8.9E-84 3.1E-88 636.0 34.1 325 30-373 3-334 (340)
14 3hgj_A Chromate reductase; TIM 100.0 1.6E-83 5.5E-88 636.9 35.0 325 30-367 2-339 (349)
15 3l5l_A Xenobiotic reductase A; 100.0 3.8E-83 1.3E-87 637.1 31.8 325 30-365 2-344 (363)
16 3l5a_A NADH/flavin oxidoreduct 100.0 4.8E-83 1.6E-87 645.2 25.0 324 28-364 23-364 (419)
17 1z41_A YQJM, probable NADH-dep 100.0 6.4E-78 2.2E-82 594.6 34.3 318 29-365 2-326 (338)
18 3k30_A Histamine dehydrogenase 100.0 2.9E-74 1E-78 617.8 35.2 344 25-384 7-376 (690)
19 1ps9_A 2,4-dienoyl-COA reducta 100.0 2.8E-73 9.5E-78 608.4 33.6 337 29-384 2-363 (671)
20 1o94_A Tmadh, trimethylamine d 100.0 2E-73 6.9E-78 614.6 30.5 341 29-384 6-374 (729)
21 1vhn_A Putative flavin oxidore 100.0 1.3E-36 4.4E-41 297.3 11.6 226 41-361 1-228 (318)
22 3b0p_A TRNA-dihydrouridine syn 100.0 3.7E-35 1.3E-39 290.4 15.4 232 42-362 1-241 (350)
23 1f76_A Dihydroorotate dehydrog 100.0 2.4E-29 8.3E-34 247.5 18.9 250 34-362 45-335 (336)
24 1jub_A Dihydroorotate dehydrog 99.9 1.1E-24 3.6E-29 212.0 18.7 244 35-363 3-289 (311)
25 2e6f_A Dihydroorotate dehydrog 99.9 8.8E-25 3E-29 212.9 18.1 245 35-364 5-292 (314)
26 1ep3_A Dihydroorotate dehydrog 99.9 3E-25 1E-29 215.5 14.0 243 35-363 8-287 (311)
27 1tv5_A Dhodehase, dihydroorota 99.9 2.3E-24 7.7E-29 218.0 16.4 247 35-363 83-420 (443)
28 4ef8_A Dihydroorotate dehydrog 99.8 2.5E-19 8.5E-24 176.5 21.5 269 2-363 14-324 (354)
29 3oix_A Putative dihydroorotate 99.8 6.1E-19 2.1E-23 173.3 20.8 269 3-363 15-322 (345)
30 1gte_A Dihydropyrimidine dehyd 99.8 1.9E-18 6.5E-23 192.4 22.0 248 35-362 534-833 (1025)
31 3zwt_A Dihydroorotate dehydrog 99.8 2.2E-18 7.7E-23 170.7 19.7 249 35-363 51-345 (367)
32 3i65_A Dihydroorotate dehydrog 99.8 2.8E-17 9.6E-22 164.2 20.7 249 34-363 84-392 (415)
33 2gl5_A Putative dehydratase pr 99.7 1.3E-15 4.3E-20 153.5 16.4 141 182-345 151-298 (410)
34 2poz_A Putative dehydratase; o 99.6 1.3E-15 4.4E-20 152.6 15.0 139 183-345 139-279 (392)
35 2nli_A Lactate oxidase; flavoe 99.6 2.8E-15 9.5E-20 148.8 15.2 232 29-352 65-319 (368)
36 1kbi_A Cytochrome B2, L-LCR; f 99.6 6.5E-14 2.2E-18 144.4 19.9 235 30-353 175-439 (511)
37 2o56_A Putative mandelate race 99.5 8.4E-14 2.9E-18 140.0 16.5 137 182-345 153-295 (407)
38 2ox4_A Putative mandelate race 99.5 1.9E-13 6.5E-18 137.2 17.1 139 183-348 148-292 (403)
39 2z6i_A Trans-2-enoyl-ACP reduc 99.5 1.6E-12 5.5E-17 127.2 20.7 132 185-364 77-215 (332)
40 2qq6_A Mandelate racemase/muco 99.5 8.2E-13 2.8E-17 132.9 16.5 135 182-345 150-290 (410)
41 1p0k_A Isopentenyl-diphosphate 99.5 4.3E-12 1.5E-16 125.0 21.1 132 192-353 136-287 (349)
42 1rvk_A Isomerase/lactonizing e 99.4 1.4E-12 4.9E-17 129.9 16.5 137 182-353 150-289 (382)
43 3tjx_A Dihydroorotate dehydrog 99.4 9.5E-12 3.2E-16 122.8 17.9 146 193-363 152-324 (354)
44 2pgw_A Muconate cycloisomerase 99.4 6.2E-12 2.1E-16 125.4 16.7 135 182-359 148-284 (384)
45 2nzl_A Hydroxyacid oxidase 1; 99.4 7.2E-12 2.5E-16 125.1 15.6 233 29-353 79-343 (392)
46 1gox_A (S)-2-hydroxy-acid oxid 99.4 1.2E-11 4.1E-16 122.8 16.8 150 186-352 139-315 (370)
47 2og9_A Mandelate racemase/muco 99.4 6.9E-12 2.4E-16 125.5 15.1 126 182-348 163-290 (393)
48 1mdl_A Mandelate racemase; iso 99.3 1.2E-11 4E-16 122.2 15.2 130 183-353 146-277 (359)
49 2rdx_A Mandelate racemase/muco 99.3 1.1E-11 3.8E-16 123.4 14.5 127 183-354 147-275 (379)
50 2ovl_A Putative racemase; stru 99.3 1.7E-11 5.8E-16 121.7 15.7 135 183-358 148-284 (371)
51 3p3b_A Mandelate racemase/muco 99.3 1E-11 3.4E-16 124.3 14.1 131 180-345 147-284 (392)
52 2nql_A AGR_PAT_674P, isomerase 99.3 1.1E-11 3.7E-16 123.9 13.8 133 182-357 165-299 (388)
53 3stp_A Galactonate dehydratase 99.3 2.7E-11 9.2E-16 121.9 16.5 134 182-350 180-315 (412)
54 2qgy_A Enolase from the enviro 99.3 3.2E-11 1.1E-15 120.5 15.9 131 182-353 150-282 (391)
55 3bw2_A 2-nitropropane dioxygen 99.3 4.1E-10 1.4E-14 111.6 22.5 125 186-357 112-248 (369)
56 2pp0_A L-talarate/galactarate 99.3 4E-11 1.4E-15 120.2 15.0 125 182-347 176-302 (398)
57 2hzg_A Mandelate racemase/muco 99.3 7.1E-11 2.4E-15 118.4 16.4 134 183-354 147-285 (401)
58 1ypf_A GMP reductase; GUAC, pu 99.3 5.9E-10 2E-14 109.2 22.1 125 187-351 109-244 (336)
59 1mzh_A Deoxyribose-phosphate a 99.3 3.7E-11 1.3E-15 111.3 12.4 126 187-349 74-207 (225)
60 2qde_A Mandelate racemase/muco 99.2 1.1E-10 3.6E-15 117.0 15.2 124 183-348 147-272 (397)
61 2gdq_A YITF; mandelate racemas 99.2 7.8E-11 2.7E-15 117.4 14.0 122 183-345 141-265 (382)
62 2p8b_A Mandelate racemase/muco 99.2 1E-10 3.5E-15 115.9 14.3 129 183-353 143-274 (369)
63 1nu5_A Chloromuconate cycloiso 99.2 1.5E-10 5.2E-15 114.7 15.5 130 183-353 144-276 (370)
64 3bjs_A Mandelate racemase/muco 99.2 1.2E-10 4E-15 117.9 13.8 121 183-345 187-310 (428)
65 1jcn_A Inosine monophosphate d 99.2 1.8E-10 6.2E-15 119.1 14.8 131 185-356 256-397 (514)
66 1vcf_A Isopentenyl-diphosphate 99.2 1.9E-10 6.6E-15 112.4 14.2 128 195-353 144-292 (332)
67 2qdd_A Mandelate racemase/muco 99.2 2.4E-10 8.4E-15 113.6 14.9 131 183-358 147-279 (378)
68 2oz8_A MLL7089 protein; struct 99.2 3.5E-10 1.2E-14 112.9 15.4 128 183-352 147-278 (389)
69 2ps2_A Putative mandelate race 99.2 1.9E-10 6.4E-15 114.1 13.2 127 182-353 147-276 (371)
70 1tzz_A Hypothetical protein L1 99.2 2.8E-10 9.4E-15 113.8 14.5 124 182-346 166-295 (392)
71 3rcy_A Mandelate racemase/muco 99.2 6.2E-10 2.1E-14 112.6 17.0 138 182-349 147-287 (433)
72 1p4c_A L(+)-mandelate dehydrog 99.2 8.2E-10 2.8E-14 109.9 17.5 103 234-353 211-314 (380)
73 1tkk_A Similar to chloromucona 99.1 7E-10 2.4E-14 109.7 16.2 130 183-353 142-275 (366)
74 3sjn_A Mandelate racemase/muco 99.1 2.7E-10 9.3E-15 113.2 12.8 125 183-346 148-275 (374)
75 2hxt_A L-fuconate dehydratase; 99.1 4.7E-10 1.6E-14 113.8 14.8 121 183-345 200-323 (441)
76 2zad_A Muconate cycloisomerase 99.1 8.9E-10 3.1E-14 108.1 16.3 138 183-363 141-284 (345)
77 1eep_A Inosine 5'-monophosphat 99.1 1.8E-10 6.2E-15 115.6 11.1 134 185-358 154-297 (404)
78 1vrd_A Inosine-5'-monophosphat 99.1 4.1E-10 1.4E-14 115.8 13.0 137 183-359 236-382 (494)
79 3ozy_A Putative mandelate race 99.1 1.6E-09 5.5E-14 108.1 14.9 129 183-353 153-284 (389)
80 3khj_A Inosine-5-monophosphate 99.1 5.5E-09 1.9E-13 103.2 18.2 133 186-359 107-249 (361)
81 1sjd_A N-acylamino acid racema 99.0 1.1E-09 3.8E-14 108.4 12.8 118 183-345 143-262 (368)
82 3mqt_A Mandelate racemase/muco 99.0 1.3E-09 4.4E-14 109.0 13.3 134 177-349 148-285 (394)
83 3sbf_A Mandelate racemase / mu 99.0 3.7E-09 1.3E-13 105.9 16.4 147 183-350 135-286 (401)
84 4e5t_A Mandelate racemase / mu 99.0 3.2E-09 1.1E-13 106.5 14.9 136 183-349 153-292 (404)
85 3r2g_A Inosine 5'-monophosphat 99.0 3.4E-09 1.2E-13 104.2 14.5 133 185-358 101-240 (361)
86 3v3w_A Starvation sensing prot 99.0 4E-09 1.4E-13 106.4 15.4 149 183-348 151-309 (424)
87 3mkc_A Racemase; metabolic pro 99.0 2.7E-09 9.3E-14 106.7 14.0 131 177-346 153-287 (394)
88 4e4u_A Mandalate racemase/muco 99.0 5E-09 1.7E-13 105.3 15.8 135 183-347 146-283 (412)
89 2gjl_A Hypothetical protein PA 99.0 5.3E-08 1.8E-12 94.8 22.6 132 185-364 85-225 (328)
90 3tji_A Mandelate racemase/muco 99.0 4.4E-09 1.5E-13 106.1 15.1 148 183-350 156-307 (422)
91 3go2_A Putative L-alanine-DL-g 99.0 7.1E-09 2.4E-13 104.1 16.6 140 183-345 145-291 (409)
92 3r4e_A Mandelate racemase/muco 99.0 5.4E-09 1.9E-13 105.3 15.6 149 183-348 145-303 (418)
93 3vcn_A Mannonate dehydratase; 99.0 4E-09 1.4E-13 106.5 14.1 149 183-348 152-310 (425)
94 3ddm_A Putative mandelate race 99.0 4.8E-09 1.6E-13 104.8 14.0 121 183-345 157-280 (392)
95 3bo9_A Putative nitroalkan dio 99.0 4.9E-08 1.7E-12 95.1 20.8 123 185-355 91-214 (326)
96 4e4f_A Mannonate dehydratase; 99.0 6.8E-09 2.3E-13 104.8 14.9 145 185-346 153-309 (426)
97 3eez_A Putative mandelate race 98.9 9.3E-09 3.2E-13 102.2 15.0 132 183-359 147-280 (378)
98 3jva_A Dipeptide epimerase; en 98.9 1.4E-08 4.9E-13 100.0 15.9 129 183-353 141-271 (354)
99 3rr1_A GALD, putative D-galact 98.9 1.1E-08 3.7E-13 102.6 15.2 131 183-346 127-259 (405)
100 3tdn_A FLR symmetric alpha-bet 98.9 5.7E-10 2E-14 104.4 4.4 88 273-362 157-245 (247)
101 3sr7_A Isopentenyl-diphosphate 98.9 1.1E-07 3.8E-12 93.8 20.9 137 187-351 159-312 (365)
102 3t6c_A RSPA, putative MAND fam 98.9 3E-08 1E-12 100.4 16.9 151 183-350 157-325 (440)
103 3vkj_A Isopentenyl-diphosphate 98.9 4.2E-08 1.4E-12 97.0 16.9 106 236-355 175-309 (368)
104 3q45_A Mandelate racemase/muco 98.9 2.8E-08 9.6E-13 98.4 15.6 124 183-348 142-267 (368)
105 4dwd_A Mandelate racemase/muco 98.9 2.7E-08 9.3E-13 99.4 15.6 129 183-347 141-272 (393)
106 3i4k_A Muconate lactonizing en 98.9 3.2E-08 1.1E-12 98.5 15.7 128 183-351 150-280 (383)
107 3tj4_A Mandelate racemase; eno 98.8 2.6E-08 8.8E-13 98.8 13.8 122 183-345 153-277 (372)
108 4dxk_A Mandelate racemase / mu 98.8 3.8E-08 1.3E-12 98.5 15.0 131 187-346 158-291 (400)
109 1xm3_A Thiazole biosynthesis p 98.8 1.7E-07 5.8E-12 88.6 18.5 101 237-355 113-216 (264)
110 3toy_A Mandelate racemase/muco 98.8 5.6E-08 1.9E-12 96.8 15.2 123 183-346 169-294 (383)
111 3dg3_A Muconate cycloisomerase 98.8 4.3E-08 1.5E-12 97.0 14.3 123 183-346 141-266 (367)
112 2y88_A Phosphoribosyl isomeras 98.8 1.5E-08 5.2E-13 94.1 10.1 86 274-361 151-240 (244)
113 1y0e_A Putative N-acetylmannos 98.8 3.8E-08 1.3E-12 90.2 12.7 132 189-360 81-217 (223)
114 3gd6_A Muconate cycloisomerase 98.8 6.1E-08 2.1E-12 96.8 14.8 129 182-354 143-276 (391)
115 4hnl_A Mandelate racemase/muco 98.8 7.4E-08 2.5E-12 97.0 15.5 144 183-345 155-301 (421)
116 3ugv_A Enolase; enzyme functio 98.8 7.6E-08 2.6E-12 96.0 15.3 125 183-348 173-302 (390)
117 3dip_A Enolase; structural gen 98.8 8.8E-08 3E-12 96.2 15.8 131 186-346 161-295 (410)
118 3tdn_A FLR symmetric alpha-bet 98.8 2.2E-08 7.7E-13 93.4 10.2 87 273-361 36-123 (247)
119 4fxs_A Inosine-5'-monophosphat 98.8 2.2E-08 7.6E-13 102.9 11.1 131 184-354 231-371 (496)
120 3ro6_B Putative chloromuconate 98.8 3.4E-08 1.2E-12 97.3 12.0 127 183-351 142-271 (356)
121 4avf_A Inosine-5'-monophosphat 98.8 2.7E-08 9.3E-13 102.1 11.7 133 184-356 229-371 (490)
122 1yxy_A Putative N-acetylmannos 98.8 4.3E-08 1.5E-12 90.6 11.7 131 186-356 91-224 (234)
123 1r0m_A N-acylamino acid racema 98.7 4.3E-08 1.5E-12 97.2 11.9 117 183-345 150-268 (375)
124 4fo4_A Inosine 5'-monophosphat 98.7 4.2E-08 1.4E-12 96.8 11.6 134 185-358 109-252 (366)
125 2zc8_A N-acylamino acid racema 98.7 6.2E-08 2.1E-12 95.8 12.3 117 183-345 143-261 (369)
126 3tcs_A Racemase, putative; PSI 98.7 1.9E-07 6.6E-12 93.0 15.8 126 191-350 157-284 (388)
127 3r0u_A Enzyme of enolase super 98.7 2.4E-07 8.4E-12 92.0 16.3 125 183-349 144-272 (379)
128 2qr6_A IMP dehydrogenase/GMP r 98.7 4.8E-07 1.6E-11 90.3 18.3 131 188-354 170-314 (393)
129 3sgz_A Hydroxyacid oxidase 2; 98.7 1E-07 3.4E-12 93.4 12.6 102 234-352 203-307 (352)
130 3my9_A Muconate cycloisomerase 98.7 7.8E-08 2.7E-12 95.5 12.0 125 185-350 150-276 (377)
131 3mwc_A Mandelate racemase/muco 98.7 1.6E-07 5.3E-12 94.1 14.1 125 183-352 165-291 (400)
132 1chr_A Chloromuconate cycloiso 98.7 8.6E-08 2.9E-12 94.9 12.1 121 186-347 148-270 (370)
133 4a35_A Mitochondrial enolase s 98.6 7E-07 2.4E-11 90.4 16.2 122 183-346 203-329 (441)
134 1vzw_A Phosphoribosyl isomeras 98.6 3.1E-07 1E-11 85.4 12.4 85 274-360 148-236 (244)
135 4e8g_A Enolase, mandelate race 98.6 9.3E-07 3.2E-11 88.1 15.8 124 183-350 166-292 (391)
136 1jvn_A Glutamine, bifunctional 98.6 1.6E-07 5.4E-12 97.9 10.4 161 186-361 350-541 (555)
137 3i6e_A Muconate cycloisomerase 98.6 6.1E-07 2.1E-11 89.3 13.6 123 185-349 152-276 (385)
138 1ka9_F Imidazole glycerol phos 98.5 9.1E-07 3.1E-11 82.4 13.9 85 274-360 154-239 (252)
139 3fv9_G Mandelate racemase/muco 98.5 8.2E-07 2.8E-11 88.4 14.3 128 183-350 147-277 (386)
140 3dgb_A Muconate cycloisomerase 98.5 7.4E-07 2.5E-11 88.6 13.8 120 189-349 156-278 (382)
141 4hpn_A Putative uncharacterize 98.5 1.4E-06 4.8E-11 86.3 15.2 121 183-345 146-268 (378)
142 1thf_D HISF protein; thermophI 98.5 1.1E-06 3.8E-11 81.9 13.1 83 274-358 153-236 (253)
143 4h83_A Mandelate racemase/muco 98.5 4E-07 1.4E-11 90.7 10.6 121 185-345 168-290 (388)
144 4dye_A Isomerase; enolase fami 98.5 1.6E-06 5.3E-11 86.7 14.4 124 182-350 169-295 (398)
145 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 5.4E-07 1.8E-11 81.4 10.1 125 185-355 24-186 (205)
146 1h5y_A HISF; histidine biosynt 98.5 1.8E-06 6.1E-11 79.8 13.7 84 274-359 156-240 (253)
147 4h1z_A Enolase Q92ZS5; dehydra 98.5 2.2E-06 7.7E-11 85.9 15.3 120 184-345 191-312 (412)
148 3fcp_A L-Ala-D/L-Glu epimerase 98.5 1.6E-06 5.5E-11 86.1 13.9 124 189-353 155-281 (381)
149 3ik4_A Mandelate racemase/muco 98.5 2.9E-06 1E-10 83.7 15.7 123 183-346 145-270 (365)
150 3q58_A N-acetylmannosamine-6-p 98.5 1.5E-06 5E-11 80.4 12.6 129 186-358 91-221 (229)
151 3f4w_A Putative hexulose 6 pho 98.4 2.8E-06 9.7E-11 76.9 13.9 130 189-360 70-201 (211)
152 2c6q_A GMP reductase 2; TIM ba 98.4 1.9E-06 6.7E-11 84.6 13.5 124 190-353 124-259 (351)
153 3o07_A Pyridoxine biosynthesis 98.4 3E-06 1E-10 79.4 13.8 49 306-355 187-238 (291)
154 3s5s_A Mandelate racemase/muco 98.4 3.3E-06 1.1E-10 84.1 15.1 122 183-345 146-270 (389)
155 3usb_A Inosine-5'-monophosphat 98.4 8.4E-07 2.9E-11 91.4 11.0 130 185-355 257-397 (511)
156 3ffs_A Inosine-5-monophosphate 98.4 1.9E-06 6.7E-11 85.8 13.2 130 187-357 147-286 (400)
157 3igs_A N-acetylmannosamine-6-p 98.4 2.4E-06 8.2E-11 79.1 12.9 129 186-358 91-221 (232)
158 3u9i_A Mandelate racemase/muco 98.4 5E-06 1.7E-10 82.9 15.4 130 183-345 167-299 (393)
159 1ka9_F Imidazole glycerol phos 98.4 4.6E-07 1.6E-11 84.4 7.2 89 273-363 32-121 (252)
160 1thf_D HISF protein; thermophI 98.4 5.5E-07 1.9E-11 84.0 7.7 88 273-362 31-119 (253)
161 1qo2_A Molecule: N-((5-phospho 98.4 2.9E-06 1E-10 78.6 12.6 86 274-360 146-237 (241)
162 2ozt_A TLR1174 protein; struct 98.4 6E-06 2E-10 80.4 15.1 120 185-345 120-244 (332)
163 1zfj_A Inosine monophosphate d 98.4 2.8E-06 9.7E-11 87.0 13.3 131 185-355 234-374 (491)
164 2yzr_A Pyridoxal biosynthesis 98.4 6.4E-06 2.2E-10 79.2 14.4 47 307-354 230-281 (330)
165 2qjg_A Putative aldolase MJ040 98.3 2.1E-05 7.3E-10 74.1 17.8 140 187-360 103-251 (273)
166 1yad_A Regulatory protein TENI 98.3 9.7E-06 3.3E-10 74.0 14.8 80 279-359 124-205 (221)
167 2chr_A Chloromuconate cycloiso 98.3 3.8E-06 1.3E-10 82.9 12.2 122 183-345 145-268 (370)
168 3vdg_A Probable glucarate dehy 98.3 3.2E-06 1.1E-10 85.7 11.7 118 183-345 195-315 (445)
169 1h5y_A HISF; histidine biosynt 98.3 1.1E-06 3.7E-11 81.3 7.5 88 273-362 34-122 (253)
170 3va8_A Probable dehydratase; e 98.3 2.8E-06 9.6E-11 86.0 10.9 118 183-345 193-313 (445)
171 1wuf_A Hypothetical protein LI 98.3 7.5E-06 2.6E-10 81.6 13.9 117 183-345 163-281 (393)
172 3ngj_A Deoxyribose-phosphate a 98.3 1.3E-05 4.4E-10 74.1 14.3 131 186-348 98-231 (239)
173 1qo2_A Molecule: N-((5-phospho 98.3 6.8E-07 2.3E-11 82.9 5.8 85 274-362 32-117 (241)
174 3v5c_A Mandelate racemase/muco 98.3 3E-06 1E-10 84.5 10.8 130 182-345 149-284 (392)
175 3vc5_A Mandelate racemase/muco 98.2 5.2E-06 1.8E-10 84.0 11.5 118 183-345 190-310 (441)
176 3cyj_A Mandelate racemase/muco 98.2 1.9E-05 6.6E-10 78.0 15.0 118 184-345 147-269 (372)
177 1vzw_A Phosphoribosyl isomeras 98.2 1.9E-06 6.4E-11 80.0 6.8 86 274-362 34-120 (244)
178 2y88_A Phosphoribosyl isomeras 98.2 2E-06 6.9E-11 79.6 6.9 86 274-362 33-119 (244)
179 3oa3_A Aldolase; structural ge 98.2 3.3E-05 1.1E-09 73.2 15.1 131 186-348 129-265 (288)
180 3o63_A Probable thiamine-phosp 98.2 3.4E-05 1.2E-09 71.8 15.1 102 241-360 126-233 (243)
181 3ekg_A Mandelate racemase/muco 98.2 2E-05 6.8E-10 78.8 14.3 119 192-345 170-292 (404)
182 1h1y_A D-ribulose-5-phosphate 98.2 1.5E-05 5.1E-10 73.4 11.9 129 190-359 81-214 (228)
183 1w8s_A FBP aldolase, fructose- 98.1 6.1E-05 2.1E-09 70.9 15.8 141 186-360 95-245 (263)
184 3r12_A Deoxyribose-phosphate a 98.1 6E-05 2E-09 70.4 15.1 134 186-351 114-252 (260)
185 3ajx_A 3-hexulose-6-phosphate 98.1 1.9E-05 6.6E-10 71.1 11.5 127 190-359 71-199 (207)
186 4h2h_A Mandelate racemase/muco 98.1 3.9E-05 1.3E-09 75.9 14.7 118 184-345 153-273 (376)
187 2agk_A 1-(5-phosphoribosyl)-5- 98.1 6.1E-06 2.1E-10 77.7 8.2 83 276-360 162-253 (260)
188 3qld_A Mandelate racemase/muco 98.1 3.3E-05 1.1E-09 76.9 13.9 118 183-346 151-270 (388)
189 2nv1_A Pyridoxal biosynthesis 98.1 3.9E-05 1.3E-09 73.7 14.0 56 305-361 195-256 (305)
190 2tps_A Protein (thiamin phosph 98.1 3.6E-05 1.2E-09 70.3 12.9 79 280-359 131-213 (227)
191 2ekc_A AQ_1548, tryptophan syn 98.1 7.4E-05 2.5E-09 70.3 15.1 154 184-352 32-240 (262)
192 1wv2_A Thiazole moeity, thiazo 98.1 9.3E-05 3.2E-09 68.8 15.3 131 184-354 88-226 (265)
193 3fxg_A Rhamnonate dehydratase; 98.0 3.5E-05 1.2E-09 78.0 13.1 119 192-345 176-297 (455)
194 2pge_A MENC; OSBS, NYSGXRC, PS 98.0 1.5E-05 5.2E-10 78.9 10.3 122 183-345 164-290 (377)
195 1wue_A Mandelate racemase/muco 98.0 4.5E-05 1.5E-09 75.7 13.6 116 184-345 164-281 (386)
196 1ub3_A Aldolase protein; schif 98.0 8.1E-05 2.8E-09 68.2 14.2 134 186-351 74-212 (220)
197 2w6r_A Imidazole glycerol phos 98.0 1E-05 3.4E-10 75.9 8.3 85 275-361 159-244 (266)
198 3ndo_A Deoxyribose-phosphate a 98.0 6.1E-05 2.1E-09 69.3 13.3 136 186-348 83-221 (231)
199 1xi3_A Thiamine phosphate pyro 98.0 4.1E-05 1.4E-09 69.1 11.9 79 281-360 124-204 (215)
200 3mzn_A Glucarate dehydratase; 98.0 4.1E-05 1.4E-09 77.6 13.0 123 183-344 184-309 (450)
201 3p0w_A Mandelate racemase/muco 98.0 3.4E-05 1.1E-09 78.6 12.1 124 182-344 201-327 (470)
202 2opj_A O-succinylbenzoate-COA 98.0 3.1E-05 1.1E-09 75.3 10.7 111 194-345 90-202 (327)
203 3ovp_A Ribulose-phosphate 3-ep 98.0 0.00017 5.7E-09 66.5 14.8 50 309-359 160-210 (228)
204 4g8t_A Glucarate dehydratase; 98.0 4.1E-05 1.4E-09 77.9 11.7 115 192-344 214-329 (464)
205 3pfr_A Mandelate racemase/muco 97.9 4.6E-05 1.6E-09 77.3 11.8 123 183-344 187-312 (455)
206 1viz_A PCRB protein homolog; s 97.9 3.7E-05 1.3E-09 71.4 9.8 54 305-360 169-225 (240)
207 4adt_A Pyridoxine biosynthetic 97.9 0.00037 1.3E-08 66.6 16.1 49 307-356 197-248 (297)
208 3nav_A Tryptophan synthase alp 97.9 0.00018 6E-09 68.0 13.5 154 183-351 34-242 (271)
209 1qop_A Tryptophan synthase alp 97.9 0.00014 4.7E-09 68.6 12.6 45 306-351 194-239 (268)
210 1to3_A Putative aldolase YIHT; 97.8 0.00027 9.4E-09 67.8 14.8 145 188-359 113-271 (304)
211 2w6r_A Imidazole glycerol phos 97.8 3.2E-05 1.1E-09 72.5 7.8 87 274-362 32-122 (266)
212 1n7k_A Deoxyribose-phosphate a 97.8 0.00022 7.6E-09 65.8 13.1 133 186-351 91-228 (234)
213 1me8_A Inosine-5'-monophosphat 97.8 0.00022 7.7E-09 73.2 14.3 127 186-352 244-387 (503)
214 3vk5_A MOEO5; TIM barrel, tran 97.8 6.7E-05 2.3E-09 70.7 9.4 242 29-364 21-276 (286)
215 4af0_A Inosine-5'-monophosphat 97.8 0.00042 1.4E-08 70.7 15.9 130 184-353 281-420 (556)
216 1tqj_A Ribulose-phosphate 3-ep 97.8 7.3E-05 2.5E-09 68.9 9.3 129 190-359 79-214 (230)
217 1xg4_A Probable methylisocitra 97.8 0.00043 1.5E-08 66.1 14.5 204 68-350 30-239 (295)
218 1rpx_A Protein (ribulose-phosp 97.8 0.00012 4.2E-09 67.0 10.5 131 188-359 83-220 (230)
219 2p3z_A L-rhamnonate dehydratas 97.8 0.00047 1.6E-08 69.1 15.3 118 192-345 182-303 (415)
220 2fli_A Ribulose-phosphate 3-ep 97.8 0.00014 4.8E-09 66.0 10.6 127 190-359 78-211 (220)
221 3qja_A IGPS, indole-3-glycerol 97.8 0.00096 3.3E-08 63.0 16.6 125 190-360 129-256 (272)
222 3vnd_A TSA, tryptophan synthas 97.7 0.00025 8.7E-09 66.8 11.9 158 183-351 32-240 (267)
223 3tsm_A IGPS, indole-3-glycerol 97.7 0.0013 4.5E-08 62.0 16.2 55 306-361 207-264 (272)
224 3glc_A Aldolase LSRF; TIM barr 97.7 0.0011 3.6E-08 63.4 15.8 130 189-357 131-268 (295)
225 3jr2_A Hexulose-6-phosphate sy 97.7 0.00012 3.9E-09 66.9 8.5 124 190-355 77-203 (218)
226 3inp_A D-ribulose-phosphate 3- 97.7 0.00046 1.6E-08 64.2 12.7 141 185-359 42-236 (246)
227 1vcv_A Probable deoxyribose-ph 97.6 0.0009 3.1E-08 61.4 14.1 134 186-348 70-222 (226)
228 2okt_A OSB synthetase, O-succi 97.6 0.00022 7.4E-09 69.6 10.5 107 190-345 135-243 (342)
229 1ea0_A Glutamate synthase [NAD 97.6 0.00052 1.8E-08 77.5 14.4 104 235-351 979-1098(1479)
230 4gj1_A 1-(5-phosphoribosyl)-5- 97.6 8.1E-05 2.8E-09 69.2 6.6 85 275-361 34-119 (243)
231 3vzx_A Heptaprenylglyceryl pho 97.6 0.00032 1.1E-08 64.4 9.9 83 271-361 139-223 (228)
232 1vhc_A Putative KHG/KDPG aldol 97.6 0.0004 1.4E-08 63.7 10.6 110 186-352 79-191 (224)
233 1ofd_A Ferredoxin-dependent gl 97.6 0.00071 2.4E-08 76.6 14.4 104 235-351 1014-1133(1520)
234 3ijl_A Muconate cycloisomerase 97.5 0.00027 9.3E-09 68.8 9.8 114 184-345 137-252 (338)
235 2htm_A Thiazole biosynthesis p 97.5 0.0011 3.7E-08 61.8 13.2 129 183-351 77-212 (268)
236 1rd5_A Tryptophan synthase alp 97.5 0.0013 4.5E-08 61.4 14.0 162 183-351 32-235 (262)
237 2f6u_A GGGPS, (S)-3-O-geranylg 97.5 0.00052 1.8E-08 63.3 10.7 49 305-355 177-227 (234)
238 2czd_A Orotidine 5'-phosphate 97.5 0.0016 5.6E-08 58.7 13.6 133 177-358 62-197 (208)
239 1x1o_A Nicotinate-nucleotide p 97.5 0.0016 5.4E-08 61.9 13.7 109 218-353 159-275 (286)
240 2a4a_A Deoxyribose-phosphate a 97.5 0.00091 3.1E-08 63.2 11.7 128 186-341 109-249 (281)
241 2yw3_A 4-hydroxy-2-oxoglutarat 97.4 0.001 3.5E-08 60.2 11.5 111 187-355 74-187 (207)
242 1vc4_A Indole-3-glycerol phosp 97.4 0.0019 6.6E-08 60.3 13.1 125 189-361 121-251 (254)
243 3exr_A RMPD (hexulose-6-phosph 97.4 0.0011 3.6E-08 60.8 10.9 126 192-357 78-207 (221)
244 3nl6_A Thiamine biosynthetic b 97.4 0.0031 1.1E-07 65.1 15.6 102 240-359 98-222 (540)
245 2v82_A 2-dehydro-3-deoxy-6-pho 97.4 0.00044 1.5E-08 62.4 8.2 46 306-352 135-182 (212)
246 1kcz_A Beta-methylaspartase; b 97.3 0.00014 4.8E-09 72.8 4.9 139 183-347 182-332 (413)
247 1q6o_A Humps, 3-keto-L-gulonat 97.3 0.0017 5.9E-08 58.8 11.7 122 191-355 75-200 (216)
248 3ctl_A D-allulose-6-phosphate 97.3 0.00072 2.5E-08 62.3 9.0 123 190-354 74-204 (231)
249 2fym_A Enolase; RNA degradosom 97.3 0.00042 1.4E-08 69.8 7.6 101 237-345 219-340 (431)
250 1p1x_A Deoxyribose-phosphate a 97.3 0.0013 4.4E-08 61.6 10.1 127 186-341 88-222 (260)
251 1jpd_X L-Ala-D/L-Glu epimerase 97.3 0.00091 3.1E-08 64.6 9.4 114 183-345 134-249 (324)
252 1kko_A 3-methylaspartate ammon 97.2 0.00036 1.2E-08 69.9 5.6 136 185-345 184-330 (413)
253 1geq_A Tryptophan synthase alp 97.2 0.0083 2.9E-07 55.2 14.6 46 306-352 180-226 (248)
254 4eiv_A Deoxyribose-phosphate a 97.2 0.014 4.6E-07 55.2 15.9 134 186-347 103-273 (297)
255 1qap_A Quinolinic acid phospho 97.1 0.0039 1.3E-07 59.5 12.3 109 218-353 172-287 (296)
256 1wbh_A KHG/KDPG aldolase; lyas 97.1 0.0025 8.7E-08 57.9 10.4 112 186-354 78-192 (214)
257 1ujp_A Tryptophan synthase alp 97.1 0.0072 2.4E-07 56.9 13.4 43 307-352 192-235 (271)
258 2uva_G Fatty acid synthase bet 97.1 0.01 3.6E-07 69.9 17.5 127 185-353 655-802 (2060)
259 3cu2_A Ribulose-5-phosphate 3- 97.1 0.0011 3.8E-08 61.3 7.6 125 189-356 85-226 (237)
260 1mxs_A KDPG aldolase; 2-keto-3 97.0 0.0014 4.7E-08 60.2 7.6 110 186-351 88-199 (225)
261 3cwo_X Beta/alpha-barrel prote 97.0 0.0041 1.4E-07 55.8 10.2 86 274-361 132-218 (237)
262 3tha_A Tryptophan synthase alp 96.9 0.0042 1.4E-07 57.8 9.9 151 183-351 28-232 (252)
263 2b7n_A Probable nicotinate-nuc 96.9 0.0027 9.1E-08 60.0 8.7 90 237-353 169-264 (273)
264 1jvn_A Glutamine, bifunctional 96.9 0.0018 6E-08 67.3 7.8 88 273-361 281-395 (555)
265 3tqp_A Enolase; energy metabol 96.9 0.0028 9.7E-08 63.6 9.0 102 236-345 221-336 (428)
266 3w01_A Heptaprenylglyceryl pho 96.8 0.0024 8.2E-08 58.8 7.6 55 305-361 173-229 (235)
267 1tqx_A D-ribulose-5-phosphate 96.8 0.011 3.7E-07 54.2 11.6 108 236-359 100-214 (227)
268 3m47_A Orotidine 5'-phosphate 96.7 0.016 5.5E-07 53.1 12.4 137 178-360 76-216 (228)
269 3ih1_A Methylisocitrate lyase; 96.7 0.014 4.8E-07 55.8 12.1 137 184-350 105-247 (305)
270 4a29_A Engineered retro-aldol 96.7 0.037 1.3E-06 51.3 14.5 56 308-364 193-251 (258)
271 2jbm_A Nicotinate-nucleotide p 96.7 0.0069 2.4E-07 57.9 9.9 108 219-353 161-279 (299)
272 1vqt_A Orotidine 5'-phosphate 96.7 0.012 4E-07 53.4 10.9 71 272-360 126-206 (213)
273 1r6w_A OSB synthase, O-succiny 96.7 0.001 3.5E-08 64.2 4.0 105 195-345 127-236 (322)
274 1w6t_A Enolase; bacterial infe 96.7 0.0099 3.4E-07 59.9 11.3 101 237-345 226-352 (444)
275 2qr6_A IMP dehydrogenase/GMP r 96.6 0.012 4.1E-07 58.3 11.7 98 234-347 142-240 (393)
276 2h6r_A Triosephosphate isomera 96.6 0.016 5.5E-07 52.7 11.7 131 190-361 76-214 (219)
277 2zbt_A Pyridoxal biosynthesis 96.6 0.0021 7.2E-08 61.1 5.6 49 305-354 195-246 (297)
278 1o4u_A Type II quinolic acid p 96.5 0.004 1.4E-07 59.1 6.8 109 218-353 156-275 (285)
279 3qn3_A Enolase; structural gen 96.5 0.0094 3.2E-07 59.6 9.8 101 236-345 220-334 (417)
280 3ceu_A Thiamine phosphate pyro 96.5 0.0045 1.6E-07 55.8 6.9 69 284-354 106-180 (210)
281 4gj1_A 1-(5-phosphoribosyl)-5- 96.5 0.037 1.3E-06 51.1 13.2 138 186-353 87-231 (243)
282 2agk_A 1-(5-phosphoribosyl)-5- 96.5 0.0014 4.9E-08 61.4 3.4 78 274-361 40-123 (260)
283 3ru6_A Orotidine 5'-phosphate 96.4 0.071 2.4E-06 50.8 15.0 72 272-357 158-241 (303)
284 1eix_A Orotidine 5'-monophosph 96.4 0.023 8E-07 52.5 11.2 50 309-359 173-234 (245)
285 1i4n_A Indole-3-glycerol phosp 96.4 0.061 2.1E-06 49.9 13.9 125 190-361 117-245 (251)
286 2cu0_A Inosine-5'-monophosphat 96.4 0.016 5.4E-07 59.1 10.9 123 187-352 231-363 (486)
287 3c2e_A Nicotinate-nucleotide p 96.4 0.0067 2.3E-07 57.8 7.5 108 219-353 163-284 (294)
288 4aaj_A N-(5'-phosphoribosyl)an 96.4 0.12 4E-06 47.3 15.6 119 190-349 86-205 (228)
289 3kts_A Glycerol uptake operon 96.4 0.0062 2.1E-07 54.3 6.8 67 277-353 119-186 (192)
290 3tfx_A Orotidine 5'-phosphate 96.3 0.059 2E-06 50.2 13.6 132 188-358 75-228 (259)
291 3caw_A O-succinylbenzoate synt 96.2 0.0082 2.8E-07 58.0 7.5 106 191-345 118-227 (330)
292 4dbe_A Orotidine 5'-phosphate 96.2 0.0076 2.6E-07 55.1 6.8 73 275-358 125-199 (222)
293 2vc6_A MOSA, dihydrodipicolina 96.2 0.04 1.4E-06 52.2 12.1 128 173-336 18-152 (292)
294 1gvf_A Tagatose-bisphosphate a 96.2 0.36 1.2E-05 45.5 18.3 130 187-341 88-228 (286)
295 2yyu_A Orotidine 5'-phosphate 96.2 0.061 2.1E-06 49.6 12.7 50 309-359 167-228 (246)
296 3uj2_A Enolase 1; enzyme funct 96.1 0.039 1.4E-06 55.5 12.1 102 236-345 242-362 (449)
297 1qpo_A Quinolinate acid phosph 96.1 0.045 1.5E-06 51.7 11.5 113 218-353 158-276 (284)
298 3iv3_A Tagatose 1,6-diphosphat 96.1 0.21 7E-06 48.2 16.2 146 188-353 115-287 (332)
299 2pa6_A Enolase; glycolysis, ly 96.0 0.032 1.1E-06 55.8 10.9 101 237-345 224-338 (427)
300 3l21_A DHDPS, dihydrodipicolin 96.0 0.061 2.1E-06 51.3 12.3 131 172-338 32-169 (304)
301 3eoo_A Methylisocitrate lyase; 96.0 0.057 2E-06 51.4 11.9 138 184-350 99-243 (298)
302 3qw3_A Orotidine-5-phosphate d 96.0 0.067 2.3E-06 49.8 12.1 142 176-359 86-241 (255)
303 1dbt_A Orotidine 5'-phosphate 96.0 0.056 1.9E-06 49.7 11.5 51 308-359 165-227 (239)
304 3q94_A Fructose-bisphosphate a 96.0 0.21 7.1E-06 47.2 15.5 134 188-347 95-237 (288)
305 2yxg_A DHDPS, dihydrodipicolin 95.9 0.095 3.3E-06 49.5 13.1 126 173-335 18-151 (289)
306 3n9r_A Fructose-bisphosphate a 95.9 0.56 1.9E-05 44.6 18.3 130 187-341 88-251 (307)
307 1y0e_A Putative N-acetylmannos 95.9 0.076 2.6E-06 47.7 12.0 122 185-347 25-147 (223)
308 1rvg_A Fructose-1,6-bisphospha 95.9 0.79 2.7E-05 43.6 19.3 187 106-340 27-248 (305)
309 1o5k_A DHDPS, dihydrodipicolin 95.9 0.086 3E-06 50.3 12.6 121 186-335 36-163 (306)
310 2wkj_A N-acetylneuraminate lya 95.8 0.084 2.9E-06 50.3 12.3 130 172-337 28-165 (303)
311 1xky_A Dihydrodipicolinate syn 95.8 0.092 3.1E-06 50.0 12.5 130 172-337 29-165 (301)
312 3na8_A Putative dihydrodipicol 95.8 0.096 3.3E-06 50.2 12.6 129 172-336 41-176 (315)
313 3b8i_A PA4872 oxaloacetate dec 95.7 0.17 5.7E-06 47.9 13.8 137 184-350 98-238 (287)
314 2rfg_A Dihydrodipicolinate syn 95.7 0.087 3E-06 50.1 11.9 151 173-362 18-175 (297)
315 2fiq_A Putative tagatose 6-pho 95.7 0.21 7.1E-06 49.7 15.0 148 187-349 108-284 (420)
316 2ehh_A DHDPS, dihydrodipicolin 95.7 0.1 3.5E-06 49.5 12.4 126 173-335 18-151 (294)
317 3lab_A Putative KDPG (2-keto-3 95.7 0.02 6.7E-07 52.0 7.0 80 271-361 24-104 (217)
318 2r8w_A AGR_C_1641P; APC7498, d 95.7 0.12 4.1E-06 49.9 13.0 129 172-337 51-187 (332)
319 1fob_A Beta-1,4-galactanase; B 95.7 0.45 1.6E-05 45.8 17.0 176 106-324 59-246 (334)
320 2ojp_A DHDPS, dihydrodipicolin 95.6 0.078 2.7E-06 50.2 11.3 152 172-362 18-176 (292)
321 2v9d_A YAGE; dihydrodipicolini 95.6 0.12 4E-06 50.3 12.6 128 172-335 48-182 (343)
322 3m5v_A DHDPS, dihydrodipicolin 95.6 0.13 4.4E-06 48.9 12.6 129 172-337 24-161 (301)
323 3qze_A DHDPS, dihydrodipicolin 95.6 0.069 2.3E-06 51.2 10.7 130 172-337 40-176 (314)
324 3si9_A DHDPS, dihydrodipicolin 95.6 0.13 4.6E-06 49.2 12.7 129 172-336 39-174 (315)
325 3tr2_A Orotidine 5'-phosphate 95.6 0.37 1.3E-05 44.3 15.2 74 271-358 143-228 (239)
326 1f6k_A N-acetylneuraminate lya 95.6 0.13 4.4E-06 48.8 12.4 129 172-337 20-157 (293)
327 1yxy_A Putative N-acetylmannos 95.5 0.24 8.1E-06 44.9 13.8 117 186-343 39-157 (234)
328 3flu_A DHDPS, dihydrodipicolin 95.5 0.076 2.6E-06 50.4 10.7 129 172-336 24-159 (297)
329 3cpr_A Dihydrodipicolinate syn 95.5 0.11 3.7E-06 49.6 11.6 128 172-336 33-168 (304)
330 3tak_A DHDPS, dihydrodipicolin 95.5 0.083 2.9E-06 50.0 10.7 128 172-336 18-153 (291)
331 1pii_A N-(5'phosphoribosyl)ant 95.4 0.15 5E-06 51.4 12.9 124 190-360 124-250 (452)
332 3a5f_A Dihydrodipicolinate syn 95.4 0.085 2.9E-06 49.9 10.7 128 173-336 19-153 (291)
333 4e38_A Keto-hydroxyglutarate-a 95.4 0.031 1.1E-06 51.3 7.3 83 271-364 45-129 (232)
334 3elf_A Fructose-bisphosphate a 95.4 0.6 2E-05 45.2 16.7 142 178-341 106-272 (349)
335 3daq_A DHDPS, dihydrodipicolin 95.4 0.08 2.7E-06 50.2 10.4 151 172-361 19-176 (292)
336 1zlp_A PSR132, petal death pro 95.4 0.17 5.7E-06 48.6 12.5 138 184-350 117-261 (318)
337 2isw_A Putative fructose-1,6-b 95.3 0.41 1.4E-05 45.9 15.0 128 189-341 91-251 (323)
338 4e38_A Keto-hydroxyglutarate-a 95.2 0.14 4.9E-06 46.9 11.0 119 185-361 48-170 (232)
339 1m5w_A Pyridoxal phosphate bio 95.2 0.041 1.4E-06 50.3 7.1 38 316-353 185-222 (243)
340 3b4u_A Dihydrodipicolinate syn 95.2 0.2 6.7E-06 47.5 12.3 127 172-335 20-158 (294)
341 3fkr_A L-2-keto-3-deoxyarabona 95.1 0.27 9.1E-06 46.9 13.2 131 172-337 25-163 (309)
342 3eb2_A Putative dihydrodipicol 95.1 0.095 3.2E-06 49.9 9.9 129 172-336 21-156 (300)
343 2ze3_A DFA0005; organic waste 95.1 0.33 1.1E-05 45.5 13.3 155 186-364 26-204 (275)
344 1o66_A 3-methyl-2-oxobutanoate 95.0 0.13 4.4E-06 48.2 10.3 102 184-325 96-204 (275)
345 3khj_A Inosine-5-monophosphate 95.0 0.11 3.7E-06 50.8 10.1 92 235-346 82-173 (361)
346 3gk0_A PNP synthase, pyridoxin 95.0 0.049 1.7E-06 50.6 7.1 38 316-353 213-250 (278)
347 3lye_A Oxaloacetate acetyl hyd 95.0 0.18 6.1E-06 48.1 11.3 138 184-350 104-251 (307)
348 1vhc_A Putative KHG/KDPG aldol 94.9 0.23 7.8E-06 45.2 11.6 120 185-362 31-154 (224)
349 2p10_A MLL9387 protein; putati 94.9 0.12 4.2E-06 48.5 9.8 134 190-353 115-266 (286)
350 3dz1_A Dihydrodipicolinate syn 94.9 0.41 1.4E-05 45.7 13.8 128 172-337 25-161 (313)
351 3qfe_A Putative dihydrodipicol 94.8 0.12 3.9E-06 49.7 9.8 128 173-336 29-166 (318)
352 3d0c_A Dihydrodipicolinate syn 94.8 0.096 3.3E-06 50.2 9.2 128 172-336 29-159 (314)
353 3ldv_A Orotidine 5'-phosphate 94.7 0.65 2.2E-05 43.0 14.2 74 272-359 162-247 (255)
354 1s2w_A Phosphoenolpyruvate pho 94.7 0.68 2.3E-05 43.8 14.6 140 184-350 95-242 (295)
355 2hjp_A Phosphonopyruvate hydro 94.7 0.56 1.9E-05 44.3 13.9 141 184-350 91-239 (290)
356 1vc4_A Indole-3-glycerol phosp 94.7 0.18 6.1E-06 46.8 10.3 80 273-360 66-147 (254)
357 4gfi_A Mandelate racemase/muco 94.7 0.074 2.5E-06 51.1 8.0 105 192-345 141-247 (329)
358 3paj_A Nicotinate-nucleotide p 94.7 0.42 1.4E-05 45.7 13.0 105 218-349 195-306 (320)
359 3e96_A Dihydrodipicolinate syn 94.7 0.12 4.2E-06 49.5 9.4 129 172-337 29-160 (316)
360 3fa4_A 2,3-dimethylmalate lyas 94.6 0.32 1.1E-05 46.2 12.1 138 184-350 96-243 (302)
361 2al1_A Enolase 1, 2-phospho-D- 94.5 0.23 7.7E-06 49.8 11.2 68 270-345 274-344 (436)
362 1m3u_A 3-methyl-2-oxobutanoate 94.4 0.13 4.5E-06 47.9 8.6 102 184-325 95-204 (264)
363 3s5o_A 4-hydroxy-2-oxoglutarat 94.4 0.1 3.6E-06 49.7 8.2 130 172-337 31-169 (307)
364 2akz_A Gamma enolase, neural; 94.3 0.28 9.7E-06 49.1 11.6 68 270-345 271-341 (439)
365 1ur4_A Galactanase; hydrolase, 94.2 1.9 6.6E-05 42.5 17.2 171 106-323 88-262 (399)
366 2r91_A 2-keto-3-deoxy-(6-phosp 94.2 0.2 6.9E-06 47.2 9.7 116 186-333 22-145 (286)
367 3qw4_B UMP synthase; N-termina 94.2 0.14 4.7E-06 51.6 8.9 141 176-357 87-240 (453)
368 3r2g_A Inosine 5'-monophosphat 94.1 0.08 2.7E-06 51.7 6.8 69 273-346 100-169 (361)
369 3h5d_A DHDPS, dihydrodipicolin 94.1 0.26 8.9E-06 47.1 10.2 149 172-361 24-181 (311)
370 3ih1_A Methylisocitrate lyase; 94.0 0.53 1.8E-05 44.8 12.2 154 186-364 39-211 (305)
371 3ve9_A Orotidine-5'-phosphate 94.0 0.096 3.3E-06 47.4 6.7 76 273-359 116-193 (215)
372 1oy0_A Ketopantoate hydroxymet 93.9 0.24 8.1E-06 46.6 9.3 46 270-325 177-222 (281)
373 1zco_A 2-dehydro-3-deoxyphosph 93.8 4.2 0.00014 37.7 20.8 89 251-349 132-230 (262)
374 2v82_A 2-dehydro-3-deoxy-6-pho 93.8 0.21 7.2E-06 44.5 8.5 80 270-360 17-98 (212)
375 1w3i_A EDA, 2-keto-3-deoxy glu 93.8 0.2 6.8E-06 47.4 8.7 123 172-333 16-146 (293)
376 3qm3_A Fructose-bisphosphate a 93.7 4.8 0.00016 39.0 18.5 144 176-341 115-283 (357)
377 3pm6_A Putative fructose-bisph 93.7 2.7 9.4E-05 39.8 16.4 133 189-348 98-253 (306)
378 1dos_A Aldolase class II; lyas 93.7 5.4 0.00019 38.6 19.4 141 177-341 118-284 (358)
379 2nuw_A 2-keto-3-deoxygluconate 93.6 0.17 5.9E-06 47.7 8.0 124 172-334 16-147 (288)
380 3iwp_A Copper homeostasis prot 93.5 0.69 2.4E-05 43.5 11.7 131 172-346 104-238 (287)
381 1mxs_A KDPG aldolase; 2-keto-3 93.5 0.62 2.1E-05 42.3 11.2 122 185-362 40-163 (225)
382 1m3u_A 3-methyl-2-oxobutanoate 93.5 2.7 9.1E-05 39.1 15.5 145 186-364 27-196 (264)
383 3q58_A N-acetylmannosamine-6-p 93.4 0.41 1.4E-05 43.6 9.9 111 231-361 2-127 (229)
384 3tqv_A Nicotinate-nucleotide p 93.4 0.45 1.5E-05 44.9 10.3 88 237-351 186-275 (287)
385 4fo4_A Inosine 5'-monophosphat 93.3 0.21 7.2E-06 48.9 8.2 94 235-346 83-177 (366)
386 2ftp_A Hydroxymethylglutaryl-C 93.3 0.27 9.1E-06 46.7 8.7 140 188-345 88-234 (302)
387 3igs_A N-acetylmannosamine-6-p 93.3 0.28 9.7E-06 44.8 8.6 109 233-361 4-127 (232)
388 3l0g_A Nicotinate-nucleotide p 93.2 0.65 2.2E-05 44.0 11.1 105 218-349 171-282 (300)
389 1xg4_A Probable methylisocitra 93.2 1.9 6.6E-05 40.7 14.5 155 186-363 27-202 (295)
390 3eoo_A Methylisocitrate lyase; 93.2 1 3.5E-05 42.7 12.5 154 186-363 32-206 (298)
391 2qiw_A PEP phosphonomutase; st 93.2 0.83 2.8E-05 42.3 11.7 152 186-364 30-204 (255)
392 1hjs_A Beta-1,4-galactanase; 4 93.2 3.5 0.00012 39.4 16.7 173 106-323 59-244 (332)
393 1zlp_A PSR132, petal death pro 93.1 1.1 3.6E-05 43.0 12.6 156 186-364 49-225 (318)
394 3fok_A Uncharacterized protein 93.1 0.85 2.9E-05 43.2 11.8 77 270-359 198-288 (307)
395 3txv_A Probable tagatose 6-pho 93.1 5.8 0.0002 39.5 18.2 154 186-349 114-292 (450)
396 3lab_A Putative KDPG (2-keto-3 93.0 0.56 1.9E-05 42.4 10.0 122 186-362 28-156 (217)
397 1hg3_A Triosephosphate isomera 93.0 1 3.5E-05 40.9 11.8 52 309-361 167-220 (225)
398 2yw3_A 4-hydroxy-2-oxoglutarat 93.0 0.75 2.6E-05 41.1 10.9 104 185-345 27-130 (207)
399 2ptz_A Enolase; lyase, glycoly 93.0 0.73 2.5E-05 46.0 11.8 100 236-345 224-345 (432)
400 3vav_A 3-methyl-2-oxobutanoate 92.9 5.1 0.00017 37.4 16.6 162 171-364 14-208 (275)
401 2hmc_A AGR_L_411P, dihydrodipi 92.8 1.3 4.4E-05 42.9 12.9 127 172-337 43-178 (344)
402 2wqp_A Polysialic acid capsule 92.8 6.4 0.00022 38.0 17.7 117 187-344 115-234 (349)
403 1ydn_A Hydroxymethylglutaryl-C 92.7 0.46 1.6E-05 44.7 9.5 142 189-346 85-231 (295)
404 1o66_A 3-methyl-2-oxobutanoate 92.6 5.1 0.00018 37.3 16.2 146 186-364 27-196 (275)
405 1gox_A (S)-2-hydroxy-acid oxid 92.6 1 3.4E-05 44.0 12.0 40 306-346 214-253 (370)
406 2uv8_G Fatty acid synthase sub 92.5 0.45 1.5E-05 56.2 10.7 80 273-353 711-809 (2051)
407 3vav_A 3-methyl-2-oxobutanoate 92.5 0.82 2.8E-05 42.8 10.6 102 184-325 107-216 (275)
408 1nsj_A PRAI, phosphoribosyl an 92.4 3.6 0.00012 36.6 14.5 66 285-351 119-185 (205)
409 1wa3_A 2-keto-3-deoxy-6-phosph 92.4 0.26 8.9E-06 43.6 6.9 70 270-348 20-91 (205)
410 1geq_A Tryptophan synthase alp 92.2 0.19 6.4E-06 45.9 5.9 81 271-354 18-123 (248)
411 3qja_A IGPS, indole-3-glycerol 92.1 0.23 7.9E-06 46.5 6.5 78 274-356 74-152 (272)
412 1w0m_A TIM, triosephosphate is 92.0 1.4 4.6E-05 40.1 11.2 51 309-360 164-216 (226)
413 1vcv_A Probable deoxyribose-ph 91.9 1.6 5.4E-05 39.7 11.6 81 186-287 131-211 (226)
414 3tsm_A IGPS, indole-3-glycerol 91.9 0.36 1.2E-05 45.2 7.5 76 274-355 81-158 (272)
415 4h3d_A 3-dehydroquinate dehydr 91.9 0.74 2.5E-05 42.7 9.6 131 185-347 34-177 (258)
416 3jr2_A Hexulose-6-phosphate sy 91.9 1.8 6E-05 38.7 11.9 94 234-346 44-139 (218)
417 3o1n_A 3-dehydroquinate dehydr 91.9 0.63 2.2E-05 43.6 9.1 141 173-349 46-199 (276)
418 2nli_A Lactate oxidase; flavoe 91.7 1.1 3.8E-05 43.7 11.1 39 306-345 218-256 (368)
419 1ypf_A GMP reductase; GUAC, pu 91.7 0.26 8.7E-06 47.6 6.4 66 275-345 108-176 (336)
420 2ffc_A Orotidine 5-monophospha 91.7 1.1 3.8E-05 43.4 10.9 51 307-358 278-336 (353)
421 1vli_A Spore coat polysacchari 91.6 1.1 3.7E-05 44.0 10.8 134 186-345 47-191 (385)
422 4af0_A Inosine-5'-monophosphat 91.6 0.27 9.2E-06 50.2 6.7 70 272-346 280-350 (556)
423 3gnn_A Nicotinate-nucleotide p 91.6 0.73 2.5E-05 43.6 9.3 86 237-349 197-284 (298)
424 2yr1_A 3-dehydroquinate dehydr 91.6 1.2 3.9E-05 41.3 10.6 149 173-355 26-185 (257)
425 1jub_A Dihydroorotate dehydrog 91.6 2.7 9.3E-05 39.5 13.5 84 251-345 95-191 (311)
426 3no5_A Uncharacterized protein 91.5 0.62 2.1E-05 43.7 8.7 46 185-248 32-77 (275)
427 1qop_A Tryptophan synthase alp 91.5 0.65 2.2E-05 43.2 8.8 90 270-360 29-144 (268)
428 3zen_D Fatty acid synthase; tr 91.5 0.19 6.5E-06 61.5 6.2 43 310-353 599-653 (3089)
429 2ze3_A DFA0005; organic waste 91.4 5.2 0.00018 37.3 15.0 135 184-350 93-236 (275)
430 2hjp_A Phosphonopyruvate hydro 91.2 1.3 4.5E-05 41.7 10.6 154 186-364 25-203 (290)
431 3vkj_A Isopentenyl-diphosphate 91.2 0.44 1.5E-05 46.6 7.5 99 241-345 111-217 (368)
432 2wqp_A Polysialic acid capsule 91.2 1.1 3.8E-05 43.4 10.3 141 185-353 37-187 (349)
433 4dpp_A DHDPS 2, dihydrodipicol 91.0 0.97 3.3E-05 44.0 9.7 90 172-297 76-166 (360)
434 3sgz_A Hydroxyacid oxidase 2; 90.9 1.6 5.6E-05 42.3 11.2 40 305-345 205-244 (352)
435 2qiw_A PEP phosphonomutase; st 90.9 3.1 0.0001 38.4 12.6 134 186-348 96-238 (255)
436 2ztj_A Homocitrate synthase; ( 90.9 3.1 0.00011 40.7 13.4 134 190-345 81-220 (382)
437 1aj0_A DHPS, dihydropteroate s 90.5 0.92 3.1E-05 42.7 8.8 107 251-361 17-131 (282)
438 1v5x_A PRA isomerase, phosphor 90.5 3.2 0.00011 37.0 11.9 63 285-351 117-179 (203)
439 1wbh_A KHG/KDPG aldolase; lyas 90.4 0.49 1.7E-05 42.6 6.6 79 272-361 28-107 (214)
440 3nav_A Tryptophan synthase alp 90.4 0.94 3.2E-05 42.3 8.7 81 270-352 32-138 (271)
441 1vkf_A Glycerol uptake operon 90.4 0.31 1.1E-05 43.0 5.0 65 276-353 119-184 (188)
442 3f4w_A Putative hexulose 6 pho 90.2 4.1 0.00014 35.7 12.6 108 235-361 39-155 (211)
443 2ekc_A AQ_1548, tryptophan syn 90.2 0.56 1.9E-05 43.5 7.0 76 270-346 29-129 (262)
444 3b8i_A PA4872 oxaloacetate dec 90.2 3.1 0.0001 39.2 12.1 155 186-364 31-204 (287)
445 4avf_A Inosine-5'-monophosphat 90.2 0.37 1.3E-05 48.9 6.2 68 274-346 230-298 (490)
446 1sfl_A 3-dehydroquinate dehydr 89.9 0.85 2.9E-05 41.7 7.9 139 186-355 20-171 (238)
447 3nvt_A 3-deoxy-D-arabino-heptu 89.8 16 0.00053 35.8 20.1 204 34-347 129-347 (385)
448 3fa4_A 2,3-dimethylmalate lyas 89.8 3.5 0.00012 39.0 12.2 155 186-362 28-204 (302)
449 1vli_A Spore coat polysacchari 89.6 13 0.00044 36.3 16.4 116 187-344 125-246 (385)
450 2nzl_A Hydroxyacid oxidase 1; 89.5 2.4 8.3E-05 41.6 11.3 40 305-345 240-279 (392)
451 3lye_A Oxaloacetate acetyl hyd 89.4 4.3 0.00015 38.5 12.5 155 186-362 35-212 (307)
452 3ffs_A Inosine-5-monophosphate 89.4 0.42 1.4E-05 47.3 5.7 67 275-346 146-212 (400)
453 1rpx_A Protein (ribulose-phosp 89.3 1 3.6E-05 40.4 7.9 119 184-343 24-144 (230)
454 1vr6_A Phospho-2-dehydro-3-deo 89.2 16 0.00056 35.2 16.7 79 270-349 225-313 (350)
455 3ble_A Citramalate synthase fr 88.9 1.8 6.1E-05 41.6 9.7 138 189-345 102-244 (337)
456 1ydo_A HMG-COA lyase; TIM-barr 88.9 2.7 9.1E-05 39.9 10.8 139 189-345 87-232 (307)
457 4fxs_A Inosine-5'-monophosphat 88.7 0.59 2E-05 47.5 6.4 67 275-346 233-300 (496)
458 1nvm_A HOA, 4-hydroxy-2-oxoval 88.5 2.4 8.2E-05 40.8 10.4 130 189-355 99-239 (345)
459 1rd5_A Tryptophan synthase alp 88.4 1.8 6.2E-05 39.7 9.1 75 271-346 31-125 (262)
460 1p0k_A Isopentenyl-diphosphate 88.4 3.1 0.00011 39.9 11.0 68 278-346 133-209 (349)
461 2c6q_A GMP reductase 2; TIM ba 88.3 0.83 2.8E-05 44.3 6.9 65 277-346 122-189 (351)
462 1oy0_A Ketopantoate hydroxymet 88.2 11 0.00036 35.3 14.1 160 172-364 20-214 (281)
463 1ep3_A Dihydroorotate dehydrog 88.2 3.8 0.00013 38.3 11.3 101 234-345 83-195 (311)
464 2nx9_A Oxaloacetate decarboxyl 88.1 6.1 0.00021 39.7 13.3 139 181-357 101-248 (464)
465 3noy_A 4-hydroxy-3-methylbut-2 87.9 2 6.7E-05 41.6 9.0 81 269-357 43-123 (366)
466 1tx2_A DHPS, dihydropteroate s 87.9 1.8 6.1E-05 41.0 8.7 91 269-361 60-157 (297)
467 2bdq_A Copper homeostasis prot 87.7 8.4 0.00029 34.8 12.6 136 173-346 70-207 (224)
468 1vrd_A Inosine-5'-monophosphat 87.4 0.74 2.5E-05 46.6 6.2 67 274-345 238-305 (494)
469 1h1y_A D-ribulose-5-phosphate 87.2 1.3 4.6E-05 39.8 7.2 134 185-360 21-165 (228)
470 3sr7_A Isopentenyl-diphosphate 86.8 1.5 5.2E-05 42.7 7.8 68 277-345 160-236 (365)
471 1twd_A Copper homeostasis prot 86.8 11 0.00036 34.8 12.9 131 173-346 67-198 (256)
472 1tqj_A Ribulose-phosphate 3-ep 86.7 0.69 2.3E-05 42.0 4.9 122 185-346 19-141 (230)
473 2xz9_A Phosphoenolpyruvate-pro 86.4 19 0.00065 34.2 15.2 216 67-346 32-277 (324)
474 4adt_A Pyridoxine biosynthetic 86.4 1.5 5.1E-05 41.5 7.2 84 276-361 32-121 (297)
475 4ay7_A Methylcobalamin\: coenz 86.3 5.9 0.0002 37.9 11.7 131 178-350 185-328 (348)
476 3vnd_A TSA, tryptophan synthas 86.3 2.6 8.9E-05 39.2 8.7 90 270-361 30-146 (267)
477 3n3m_A Orotidine 5'-phosphate 86.3 3.4 0.00011 39.9 9.7 54 307-360 266-326 (342)
478 2ftp_A Hydroxymethylglutaryl-C 86.2 7.9 0.00027 36.3 12.3 124 100-297 117-240 (302)
479 2vef_A Dihydropteroate synthas 86.2 1.7 5.7E-05 41.5 7.5 103 256-361 18-127 (314)
480 1jcn_A Inosine monophosphate d 86.2 1 3.5E-05 45.9 6.4 68 274-346 256-324 (514)
481 1eep_A Inosine 5'-monophosphat 86.1 0.94 3.2E-05 44.6 6.0 67 275-346 155-222 (404)
482 1kbi_A Cytochrome B2, L-LCR; f 86.1 4.5 0.00015 41.1 11.2 39 306-345 332-370 (511)
483 4hb7_A Dihydropteroate synthas 86.0 3.9 0.00013 38.1 9.7 103 256-362 15-124 (270)
484 2cw6_A Hydroxymethylglutaryl-C 85.9 3.6 0.00012 38.6 9.8 139 189-345 86-231 (298)
485 1tx2_A DHPS, dihydropteroate s 85.9 5.3 0.00018 37.7 10.8 61 182-256 62-122 (297)
486 1s2w_A Phosphoenolpyruvate pho 85.9 5.2 0.00018 37.7 10.8 153 186-362 29-205 (295)
487 3chv_A Prokaryotic domain of u 85.4 1.3 4.5E-05 41.6 6.2 51 186-254 37-87 (284)
488 1m5w_A Pyridoxal phosphate bio 85.2 3.7 0.00012 37.4 8.8 122 59-207 72-194 (243)
489 3ble_A Citramalate synthase fr 85.2 6.2 0.00021 37.8 11.2 116 102-297 132-250 (337)
490 2vp8_A Dihydropteroate synthas 85.0 3.6 0.00012 39.3 9.2 60 183-256 65-124 (318)
491 3ivs_A Homocitrate synthase, m 85.0 7.1 0.00024 38.7 11.7 135 189-345 116-254 (423)
492 1ydn_A Hydroxymethylglutaryl-C 85.0 19 0.00067 33.3 14.4 122 101-296 114-235 (295)
493 1aj0_A DHPS, dihydropteroate s 84.7 5.3 0.00018 37.4 10.1 60 183-256 38-97 (282)
494 3g8r_A Probable spore coat pol 84.5 9 0.00031 37.0 11.8 125 192-344 30-166 (350)
495 4ef8_A Dihydroorotate dehydrog 84.5 5.3 0.00018 38.7 10.3 146 186-345 61-227 (354)
496 3qtp_A Enolase 1; glycolysis, 84.2 8.7 0.0003 38.2 11.9 68 270-345 280-351 (441)
497 1eye_A DHPS 1, dihydropteroate 84.2 4.8 0.00016 37.7 9.6 93 266-361 23-122 (280)
498 1rqb_A Transcarboxylase 5S sub 84.0 13 0.00045 38.0 13.4 139 182-358 119-268 (539)
499 3zwt_A Dihydroorotate dehydrog 83.8 7 0.00024 38.0 10.9 91 184-294 235-329 (367)
500 1zfj_A Inosine monophosphate d 83.6 1.2 4.2E-05 44.8 5.7 66 275-346 235-302 (491)
No 1
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=100.00 E-value=1.6e-92 Score=703.24 Aligned_cols=355 Identities=40% Similarity=0.703 Sum_probs=317.9
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
|++||+|++||+++|||||||+||+++++ .||.||+.+++||++||+ +||||+|++.|++.|+..++++++|+|++++
T Consensus 1 Mp~LF~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~ 79 (358)
T 4a3u_A 1 MPSLFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVE 79 (358)
T ss_dssp -CCTTSCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHH
Confidence 37899999999999999999999999988 899999999999999995 7999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCccc-ccCCCcccCCCCCCCCChhHHHHHHHHHH
Q 015862 108 AWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQI-RANGVDVAQFTPPRRLRTDEIPQIVNDFR 186 (399)
Q Consensus 108 ~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~-~~~g~~~~~~~~p~~mt~~eI~~ii~~f~ 186 (399)
+||+++++||++|+++++||+|+||++.+.. .+..+++||+++..... ...+. .+...|++||.+||+++|++|+
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~--~g~~~~apS~~~~~~~~~~~~~~--~~~~~pr~mt~~eI~~ii~~F~ 155 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGRMVPSNV--SGMQPVAPSASQAPGLGHTYDGK--KPYDVARALRLDEIPRLLDDYE 155 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGGGCCHHH--HSSCCEESSCEECSSEEECSSSE--EECCEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceeeccccccccccccc--cccCCCCCcccccCCcccccCCC--CCCccCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999986543 45678999987654211 01110 1245689999999999999999
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
+||++|++|||||||||++|||||+|||||.+|+|||+||||+|||+||++|||++||++||+++|+||||+++...+..
T Consensus 156 ~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~ 235 (358)
T 4a3u_A 156 KAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTV 235 (358)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999977666555
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
..++.++.+.+++.+++.|+++++++.+.............+++.+|+.+..||+++|.+|++.|+++|++|.||+|+||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~g 315 (358)
T 4a3u_A 236 DSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISFG 315 (358)
T ss_dssp CSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEES
T ss_pred ccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHhh
Confidence 55667778899999999999999999887654444445567889999999999988877799999999999999999999
Q ss_pred hHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCC
Q 015862 347 RLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLN 389 (399)
Q Consensus 347 R~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (399)
|++|+|||||+|+++|+|++++++.+||+ ....||+|||++.
T Consensus 316 R~~ladPdlp~k~~~g~pl~~~~~~t~y~-~~~~GY~dyp~~~ 357 (358)
T 4a3u_A 316 RPFIGNPDLPRRFFEKAPLTKDVIETWYT-QTPKGYTDYPLLG 357 (358)
T ss_dssp HHHHHCTTHHHHHHHTCCCCCCCGGGSSC-SSSTTTTCSCCC-
T ss_pred HHHHhChhHHHHHHhCCCCCCCchhcCCC-CCCCCcCCCCCCC
Confidence 99999999999999999999999999998 6779999999985
No 2
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=3.2e-90 Score=684.98 Aligned_cols=349 Identities=42% Similarity=0.744 Sum_probs=315.7
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHhh
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEA 108 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~ 108 (399)
++||+|++||+++|||||||+||+++++ .||.||+.+++||++||+ +||||||++.|++.|+.+++++++|+|+++++
T Consensus 2 ~~Lf~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~ 80 (362)
T 4ab4_A 2 TTLFDPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRG 80 (362)
T ss_dssp CCTTSCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHH
T ss_pred cccCCCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHH
Confidence 5799999999999999999999999988 799999999999999998 99999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCccc-ccCCCcccCCCCCCCCChhHHHHHHHHHHH
Q 015862 109 WKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQI-RANGVDVAQFTPPRRLRTDEIPQIVNDFRL 187 (399)
Q Consensus 109 ~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~-~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~ 187 (399)
||+++++||++|+++++||+|+||++.+... .+.++++||+++..... ...|. ....+|++||.+||+++|++|++
T Consensus 81 ~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~~~--~~~~~pr~mt~~eI~~ii~~f~~ 157 (362)
T 4ab4_A 81 WNNVTKAVHAAGGRIFLQLWHVGRISHPSYL-NGELPVAPSAIQPKGHVSLVRPL--SDYPTPRALETEEINDIVEAYRS 157 (362)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSCCCCSSBCSSCSSC--CBCCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeccCccccccccc-CCCcccCCCCCCCCccccccccc--cCCCCCCcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543 45678999998765310 00110 12467999999999999999999
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.+.++.+
T Consensus 158 AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~ 237 (362)
T 4ab4_A 158 GAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGD 237 (362)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999997799999999765555544
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEech
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 347 (399)
.++.+++.++++.|++.|+||||++.+... .++++.||+++++|||++|++|+++|+++|++|.||+|++||
T Consensus 238 ~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~--------~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR 309 (362)
T 4ab4_A 238 ADRAETFTYVARELGKRGIAFICSREREAD--------DSIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFGV 309 (362)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEECCCCT--------TCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESH
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEECCCCCC--------HHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEECH
Confidence 566788999999999999999999987511 157889999999999999999999999999999999999999
Q ss_pred HHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCcc
Q 015862 348 LFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNTS 391 (399)
Q Consensus 348 ~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 391 (399)
++++||||++|+++|.+++++++.+||+ ....||+|||++..+
T Consensus 310 ~~lanPdl~~k~~~g~~l~~~d~~~~y~-~~~~gy~dyp~~~~~ 352 (362)
T 4ab4_A 310 PFIANPDLPARLAADAPLNEAHPETFYG-KGPVGYIDYPRLKLA 352 (362)
T ss_dssp HHHHCTTHHHHHHTTCCCCCCCGGGSSS-SSSTTTTCSCCCC--
T ss_pred HhHhCcHHHHHHHcCCCCCCCChhhccC-CCCCCcccccccchh
Confidence 9999999999999999999999999998 567999999998654
No 3
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=4.8e-90 Score=683.48 Aligned_cols=349 Identities=42% Similarity=0.730 Sum_probs=316.7
Q ss_pred cCccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 28 PVILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 28 ~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
.++.||+|++||+++|||||||+||+++++ .||.||+.+++||++||+ +||||||++.|++.|+.+++++++|+|+++
T Consensus 8 ~~~~~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i 86 (361)
T 3gka_A 8 HMPSLFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQV 86 (361)
T ss_dssp -CCCTTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHH
T ss_pred cCccccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHH
Confidence 357899999999999999999999999988 799999999999999998 999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCccc-ccCCCcccCCCCCCCCChhHHHHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQI-RANGVDVAQFTPPRRLRTDEIPQIVNDF 185 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~-~~~g~~~~~~~~p~~mt~~eI~~ii~~f 185 (399)
++||+++++||++|+++++||+|+||++.+... .+.++++||+++..... ...|. ....+|++||.+||+++|++|
T Consensus 87 ~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~g~--~~~~~pr~mt~~eI~~ii~~f 163 (361)
T 3gka_A 87 DGWRLVTDAVHAAGGRIFLQLWHVGRVSDPVFL-DGALPVAPSAIAPGGHVSLVRPQ--RPYVTPRALELDEIPGVVAAF 163 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSSCCCSSBCSSCSSC--CBCCCCEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEeeccCCcccccccc-CCCCcccCCCCCCCCcccccccc--cCCCCCccCCHHHHHHHHHHH
Confidence 999999999999999999999999999876543 45678999998765310 00110 124679999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
++||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.+.++
T Consensus 164 ~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~ 243 (361)
T 3gka_A 164 RRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTM 243 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSC
T ss_pred HHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999977999999997655555
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
.+.++.+++.++++.|++.|+||||++.+... .++++.||+.+++|||++|++|+++|+++|++|.||+|++
T Consensus 244 ~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~--------~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 244 GDSDPAATFGHVARELGRRRIAFLFARESFGG--------DAIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCSEEEEECCCST--------TCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC--------HHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 45567888999999999999999999987511 1578899999999999999999999999999999999999
Q ss_pred chHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCC
Q 015862 346 GRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLN 389 (399)
Q Consensus 346 gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (399)
||++++||||++|+++|.+++++++.+||+ ....||+|||++.
T Consensus 316 GR~~ladPdl~~k~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~~ 358 (361)
T 3gka_A 316 GKLFIANPDLPRRFKLNAPLNEPNAATFYA-QGEVGYTDYPALE 358 (361)
T ss_dssp SHHHHHCTTHHHHHHHTCCCCCCCGGGSSC-SSSTTTTCSCCCC
T ss_pred CHHhHhCcHHHHHHHhCCCCCCCccccccC-CCCCCcccChhcc
Confidence 999999999999999999999999999998 6789999999886
No 4
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=2.7e-87 Score=673.77 Aligned_cols=365 Identities=57% Similarity=0.959 Sum_probs=316.5
Q ss_pred cCccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 28 PVILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 28 ~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
.+++||+|++||+++|||||||+||+++++.+|.||+.+++||++||+|+||||||+++|++.|..+++++++|+|++++
T Consensus 14 ~~~~Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~ 93 (402)
T 2hsa_B 14 GNNPLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVR 93 (402)
T ss_dssp ---CTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHH
T ss_pred hhhhcCCCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHH
Confidence 45789999999999999999999999998855799999999999999889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcc---cccCCCcccCCCCCCCCChhHHHHHHHH
Q 015862 108 AWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQ---IRANGVDVAQFTPPRRLRTDEIPQIVND 184 (399)
Q Consensus 108 ~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~---~~~~g~~~~~~~~p~~mt~~eI~~ii~~ 184 (399)
+||+++++||++|+++++||+|+||++.+...+.+.++++||+++.... ....|. ......|++||.+||++++++
T Consensus 94 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~-~~~~~~p~~mt~~eI~~ii~~ 172 (402)
T 2hsa_B 94 EWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGT-HGIYPKPRAIGTYEISQVVED 172 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSC-EEECCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCccccccccccccccc-ccCCCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999997654334678899999886421 000010 001357999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
|++||++|++||||+||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.+.+
T Consensus 173 f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g 252 (402)
T 2hsa_B 173 YRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLD 252 (402)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTT
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999997799999999755544
Q ss_pred CCCCChHHHHHHHHHhhhhhC------ceEEEEeCCCccccc-cc------C-CCchhhHHHHhhcCCcEEEeCCCCHHH
Q 015862 265 SGDSNPEALGLYMAESLNKYG------ILYCHMVEPRMKTRE-EK------S-ECPHSLLPMRKAFKGTFLVAGGYDRED 330 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~G------vd~l~v~~~~~~~~~-~~------~-~~~~~~~~ir~~~~~pvi~~Ggit~~~ 330 (399)
+.+.++.+++.++++.|++.| +|+|+++.+...... .. . ..+++++.||+.+++|||++|++|+++
T Consensus 253 ~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~ 332 (402)
T 2hsa_B 253 AMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTREL 332 (402)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHHH
Confidence 444567888999999999999 999999987643211 01 0 134578889999999999999999999
Q ss_pred HHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCcccc
Q 015862 331 GNKAIAEGRADLVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNTSSL 393 (399)
Q Consensus 331 a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 393 (399)
|+++|++|.||+|+|||++++||||++|+++|.+++++++.+||+..+..||+|||++....+
T Consensus 333 a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~l~~~~~~tfy~~~~~~Gy~dyp~~~~~~~ 395 (402)
T 2hsa_B 333 GIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFLQGNGS 395 (402)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCC-----
T ss_pred HHHHHHCCCCceeeecHHHHhCchHHHHHHhCCCCCCCChhhcccCCCCCCcccCccchhhhc
Confidence 999999999999999999999999999999999999999999993377899999999976544
No 5
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=100.00 E-value=5.1e-88 Score=680.03 Aligned_cols=358 Identities=36% Similarity=0.621 Sum_probs=301.2
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCC-CCC-CCC-HHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHH
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNN-VPQ-PHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQ 105 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G-~~t-~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~ 105 (399)
++||+|++||+++|||||||+||+++++ .+| .|+ +.+++||++||+ |+||||||+++|++.|+.+++++++|+|++
T Consensus 15 s~LF~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~ 94 (400)
T 4gbu_A 15 TNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQ 94 (400)
T ss_dssp SGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHH
T ss_pred CCCCCCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHH
Confidence 6799999999999999999999999988 666 444 678999999999 899999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCC-CCCCCCcccCCCCCCccc--ccCCCcccCCCCCCCCChhHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQ-PNGQAPISCTDKPLTPQI--RANGVDVAQFTPPRRLRTDEIPQIV 182 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~-~~~~~~~aps~~~~~~~~--~~~g~~~~~~~~p~~mt~~eI~~ii 182 (399)
+++||+++++||++|+++++||+|+||++.+... ..+.++.++|........ .... ....+|++||.+||+++|
T Consensus 95 i~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~pr~mt~~eI~~ii 171 (400)
T 4gbu_A 95 MVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAK---KANNPQHSLTKDEIKQYI 171 (400)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHH---HTTCCCEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccc---cCCCCCccCCHHHHHHHH
Confidence 9999999999999999999999999999864321 134455666654332100 0000 124578999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
++|++||++|++|||||||||++|||||+|||||.+|+|||+||||+|||+||++|||++||++||+++|+||||+.+.+
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~ 251 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVF 251 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999997655
Q ss_pred CCCC---CCChHHHHHHHHHhhhhhC-----ceEEEEeCCCcccccc----cCCCchhhHHHHhhcCCcEEEeCCC-CHH
Q 015862 263 MESG---DSNPEALGLYMAESLNKYG-----ILYCHMVEPRMKTREE----KSECPHSLLPMRKAFKGTFLVAGGY-DRE 329 (399)
Q Consensus 263 ~~~~---~~~~~~~~~~l~~~Le~~G-----vd~l~v~~~~~~~~~~----~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~ 329 (399)
.+.. .....++..+++..|+..+ ++++++..+....+.. ........+.+|+.+++|||++|++ +..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~ 331 (400)
T 4gbu_A 252 NSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHP 331 (400)
T ss_dssp TTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCH
T ss_pred CCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChH
Confidence 4332 2345677788888887653 6788988776443221 1122345677999999999999999 566
Q ss_pred HHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCcc
Q 015862 330 DGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNTS 391 (399)
Q Consensus 330 ~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 391 (399)
++.+.+.+|.+|+|+|||++|+|||||+|+++|+|++++++.+||+ ....||+|||++.++
T Consensus 332 ~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G~pl~~~d~~tfy~-~~~~Gytdyp~~~e~ 392 (400)
T 4gbu_A 332 EVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQ-MSAHGYIDYPTYEEA 392 (400)
T ss_dssp HHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSC-SSSTTTTCCCCHHHH
T ss_pred HHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcCCCCCCCChhhcCC-CCCCCcCCCcchHHH
Confidence 6666666677999999999999999999999999999999999999 788999999998754
No 6
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=100.00 E-value=6e-88 Score=674.71 Aligned_cols=359 Identities=36% Similarity=0.601 Sum_probs=313.8
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCC-CCCCCCHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPN-TPSIWTKEQ 105 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~-~~~l~~d~~ 105 (399)
+++||+|++||+++|||||||+||+++++ ++|.||+.+++||++||+ |+||||||++.|++.|+.+++ ++++|+|++
T Consensus 11 ~~~Lf~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~ 90 (407)
T 3tjl_A 11 DSEAFQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKH 90 (407)
T ss_dssp TSGGGSCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHH
T ss_pred cccCCCCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHH
Confidence 47899999999999999999999999888 789999999999999999 899999999999999999999 999999999
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCC-CCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQP-NGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVND 184 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~-~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~ 184 (399)
+++||+++++||++|+++++||+|+||++++...+ .+.++++||+++........+ ......|++||.+||+++|++
T Consensus 91 i~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~--~~~~~~pr~lt~~eI~~ii~~ 168 (407)
T 3tjl_A 91 AKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAA--EAVGNPVRALTTQEVKDLVYE 168 (407)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHH--HHTTCCCEECCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCccccccccccc--ccCCCCCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999998754211 356789999988631100000 012567999999999999999
Q ss_pred -HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 185 -FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 185 -f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
|++||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.+.
T Consensus 169 ~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~ 248 (407)
T 3tjl_A 169 AYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQ 248 (407)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999889999999977665
Q ss_pred CCCCC-C---hHHHHHHHHHhh---hhhC--ceEEEEeCCCcccccc-c-CCCchhhHHHHhhcCCcEEEeCCC-CHHHH
Q 015862 264 ESGDS-N---PEALGLYMAESL---NKYG--ILYCHMVEPRMKTREE-K-SECPHSLLPMRKAFKGTFLVAGGY-DREDG 331 (399)
Q Consensus 264 ~~~~~-~---~~~~~~~l~~~L---e~~G--vd~l~v~~~~~~~~~~-~-~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a 331 (399)
++... + +.+++.++++.| ++.| +||||+++++...... . ...+..+..+|+.+++|||++|++ +.+++
T Consensus 249 g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA 328 (407)
T 3tjl_A 249 NMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSYDAPE 328 (407)
T ss_dssp GCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCGGGGTTT
T ss_pred CCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCCCCHHHH
Confidence 55433 4 578899999999 8889 9999999876432111 1 112356788999999999999999 56668
Q ss_pred HHHHHc---CCCcEEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCc
Q 015862 332 NKAIAE---GRADLVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNT 390 (399)
Q Consensus 332 ~~~L~~---G~~D~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 390 (399)
.+++++ |.||+|++||++++||||++|+++|.+++++++.+||+ ....||+|||++..
T Consensus 329 ~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~~l~~~d~~tfy~-~~~~GY~dyp~~~~ 389 (407)
T 3tjl_A 329 FKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDLVPYDRNTFYS-DNNYGYNTFSMDSE 389 (407)
T ss_dssp THHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHTCCBCCCCGGGSSC-SSSTTTGGGGSCGG
T ss_pred HHHHHhhccCCCeEEEeChhhhhCchHHHHHHcCCCCCCCccccccC-CCCCCcccCcchhh
Confidence 887777 88999999999999999999999999999999999998 55679999999865
No 7
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=1.6e-86 Score=663.38 Aligned_cols=362 Identities=44% Similarity=0.736 Sum_probs=321.1
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHhh
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEA 108 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~ 108 (399)
+++||+|++||+++|||||||+||+++++.||.||+.+++||.+|| ++||||||+++|++.|..+++++++|+|+++++
T Consensus 8 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA-~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~ 86 (377)
T 2r14_A 8 NPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQEAG 86 (377)
T ss_dssp CCCTTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTT-TSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHH
T ss_pred hhhcCCCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHh-cCCEEEEcceeeccccccCCCCcccCCHHHHHH
Confidence 4789999999999999999999999988888999999999999999 599999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCc-cc-cc-----CCCcccCCCCCCCCChhHHHHH
Q 015862 109 WKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTP-QI-RA-----NGVDVAQFTPPRRLRTDEIPQI 181 (399)
Q Consensus 109 ~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~-~~-~~-----~g~~~~~~~~p~~mt~~eI~~i 181 (399)
||+++++||++|+++++||+|+||++++...+.+.++++||+++... .. .. .+. .....|++||.+||+++
T Consensus 87 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~--~~~~~p~~mt~~eI~~~ 164 (377)
T 2r14_A 87 WKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGL--HPTSTPRALETDEIPGI 164 (377)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEE--EECCCCEECCGGGHHHH
T ss_pred HHHHHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccc--cCCCCCccCCHHHHHHH
Confidence 99999999999999999999999999765433456789999988641 00 00 000 01357999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFAN 261 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~ 261 (399)
+++|++||++|+++|||+||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~ 244 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLE 244 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996699999999765
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRAD 341 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 341 (399)
+.++.+.++.+++.++++.|++.|+|||+++.+.+...... ..+++++.||+.+++|||++|++++++|+++|++|.||
T Consensus 245 ~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 323 (377)
T 2r14_A 245 LFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD 323 (377)
T ss_dssp CTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCce
Confidence 54444456788999999999999999999998754321111 24678899999999999999999999999999999999
Q ss_pred EEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCcccccc
Q 015862 342 LVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNTSSLVT 395 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (399)
+|++||++++||||++|+++|.+++++++.+||+ ++..||+|||++...+..+
T Consensus 324 ~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~-~~~~gy~dyp~~~~~~~~~ 376 (377)
T 2r14_A 324 AVAFGRPFIANPDLPERFRLGAALNEPDPSTFYG-GAEVGYTDYPFLDNGHDRL 376 (377)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCSCCCCCSSCCC
T ss_pred EEeecHHHHhCchHHHHHHcCCCCCCCCHHhcCC-CCCCCcccCcccccccccc
Confidence 9999999999999999999999999999999998 6778999999998777655
No 8
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=2.3e-86 Score=662.33 Aligned_cols=362 Identities=78% Similarity=1.302 Sum_probs=317.6
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHhh
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEA 108 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~ 108 (399)
+++||+|++||+++|||||||+||+++++.+|.||+.+++||++||+|+||||||+++|++.|..+++++++|+|+++++
T Consensus 13 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~ 92 (376)
T 1icp_A 13 KIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEA 92 (376)
T ss_dssp CCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHH
T ss_pred hhhcCCCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHH
Confidence 36899999999999999999999999988558999999999999998899999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHH
Q 015862 109 WKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLA 188 (399)
Q Consensus 109 ~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~a 188 (399)
||+++++||++|+++++||+|+||++++...+.+.++++||+++........|........|++||.+||++++++|++|
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~A 172 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVA 172 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999765433456789999988642100011000013579999999999999999999
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
|++|+++|||+||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||+|+++.+.++.+.
T Consensus 173 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~ 252 (376)
T 1icp_A 173 ARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDT 252 (376)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCS
T ss_pred HHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999966999999986554443345
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechH
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 348 (399)
++.+++.++++.|+++|+||||++.+.+.........+++++.||+.+++||+++|++|+++|+++|++|.||+|++||+
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~ 332 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRL 332 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeecHH
Confidence 67888999999999999999999987643211111245678999999999999999999999999999999999999999
Q ss_pred HhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCCc
Q 015862 349 FLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLNT 390 (399)
Q Consensus 349 ~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 390 (399)
+++||||++|+++|.+++++++.+||+..+..||+|||++..
T Consensus 333 ~l~~P~l~~k~~~g~~l~~~~~~~~y~~~~~~gy~dyp~~~~ 374 (376)
T 1icp_A 333 FISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLET 374 (376)
T ss_dssp HHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC-
T ss_pred HHhCccHHHHHHcCCCCCCCCHHHcccCCCCCCcccCccccc
Confidence 999999999999999999999999994377899999999853
No 9
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=1.5e-85 Score=656.36 Aligned_cols=355 Identities=37% Similarity=0.677 Sum_probs=314.5
Q ss_pred cCccCCCccccCCeeeCCceeeCCCCCCCC--CCCCCC-HHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHH
Q 015862 28 PVILFLTPYKMGNFNLSHRVVLAPLTRQRS--YNNVPQ-PHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKE 104 (399)
Q Consensus 28 ~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~--~~G~~t-~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~ 104 (399)
.+++||+|++||+++|||||||+||+++++ .+|.|| +.+++||++|| |+||||+|++.|++.|+.+++++++|+|+
T Consensus 3 ~~~~Lf~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~ 81 (379)
T 3aty_A 3 TFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDA 81 (379)
T ss_dssp SSTTTTSCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHH
T ss_pred CchhcCCCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHH
Confidence 368899999999999999999999999988 489999 99999999999 69999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHcCCeEEEecccCCCccCC--CCCC--CCCCC-----cccCCCCCCc---cccc--CCCcccCCCCC
Q 015862 105 QVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNR--DYQP--NGQAP-----ISCTDKPLTP---QIRA--NGVDVAQFTPP 170 (399)
Q Consensus 105 ~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~--~~~~--~~~~~-----~aps~~~~~~---~~~~--~g~~~~~~~~p 170 (399)
++++||+++++||++|+++++||+|+||++.+ ...+ .+.++ ++||+++... .... +|.. .....|
T Consensus 82 ~i~~~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~-~~~~~p 160 (379)
T 3aty_A 82 QIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEK-ETYGVP 160 (379)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSC-BCCCCC
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccc-cCCCCC
Confidence 99999999999999999999999999999875 3221 34567 9999987642 0000 0100 023579
Q ss_pred CCCChhHHH-HHHHHHHHHHHHHH-HhCCCEEEEccccchhhhhcccCcccCC-CCCCCC-chhhhhHHHHHHHHHHHHH
Q 015862 171 RRLRTDEIP-QIVNDFRLAARNAI-EAGFDGVELHGAHGYLIDQFLKDQVNDR-TDQYGG-SLENRCRFALEIVEAVSNE 246 (399)
Q Consensus 171 ~~mt~~eI~-~ii~~f~~aA~~a~-~aGfDgVeIh~~~GyLl~qFlSp~~N~R-~D~yGG-slenR~r~~~eii~avR~~ 246 (399)
++||.+||+ +++++|++||++|+ ++|||+||||++|||||+|||||.+|+| +|+||| |+|||+||++|||++||++
T Consensus 161 r~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~a 240 (379)
T 3aty_A 161 EELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDA 240 (379)
T ss_dssp EECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHh
Confidence 999999999 99999999999999 9999999999999999999999999999 999999 9999999999999999999
Q ss_pred hCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC
Q 015862 247 IGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY 326 (399)
Q Consensus 247 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi 326 (399)
+|+++|+||||+++.+.++.+..+.+++.++++.|++.|+|||+++.+.+... ..+ .+ ++.||+.+++|||++|++
T Consensus 241 vg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~--~~~-~~-~~~ir~~~~iPvi~~G~i 316 (379)
T 3aty_A 241 VGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQ--QIG-DV-VAWVRGSYSGVKISNLRY 316 (379)
T ss_dssp HCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSC--CCC-CH-HHHHHTTCCSCEEEESSC
T ss_pred cCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCC--Ccc-HH-HHHHHHHCCCcEEEECCC
Confidence 99779999999976544433456788899999999999999999998754321 112 25 888999999999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCC
Q 015862 327 DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLN 389 (399)
Q Consensus 327 t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (399)
|+++|+++|++|.||+|++||++++||+|++|+++|.+++++++.+||+ ....||+|||++.
T Consensus 317 t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~-~~~~gy~dyp~~~ 378 (379)
T 3aty_A 317 DFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYT-RTAVGYNDYPTYN 378 (379)
T ss_dssp CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGTTC-SSSTTTTCCCCTT
T ss_pred CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCCCCCCCHhhccC-CCCCCccCCcccC
Confidence 9999999999999999999999999999999999999999999999998 6678999999884
No 10
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=3.5e-84 Score=644.39 Aligned_cols=356 Identities=45% Similarity=0.714 Sum_probs=314.5
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCC--CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~--~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
+++||+|++||+++|||||||+||+++++ .+|.||+.+++||.+|| |+||||||++.|++.|..+++++++|+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (364)
T 1vyr_A 2 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQI 80 (364)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCCcccCCHHHH
Confidence 57899999999999999999999999886 68999999999999999 6999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccc---cCCCc-ccCCCCCCCCChhHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIR---ANGVD-VAQFTPPRRLRTDEIPQIV 182 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~---~~g~~-~~~~~~p~~mt~~eI~~ii 182 (399)
++||+++++||++|+++++||+|+||++.+...+.+.++++||+++...... ..|.. ......|++||.+||++++
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i 160 (364)
T 1vyr_A 81 AAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIV 160 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999765432356789999988642100 00000 0013579999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
++|++||++|+++|||+||||++|||||+|||||.+|+|+|+||||+|||+||++||+++||+++|+++|+||||+.+.+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999977999999996544
Q ss_pred CCC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 015862 263 MES-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRAD 341 (399)
Q Consensus 263 ~~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 341 (399)
.++ .+.++.+++.++++.|++.|+|||+++.+.+... ....+++++.||+.+++||+++|++|+++++++|++|.||
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD 318 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG--KPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLID 318 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC--CcccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCcc
Confidence 332 1345788899999999999999999998654321 1123567889999999999999999999999999999999
Q ss_pred EEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCC
Q 015862 342 LVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFL 388 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 388 (399)
+|++||++++||||++|+++|.+++++++.+||+ ....||+|||++
T Consensus 319 ~V~~gR~~l~~P~~~~~~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~ 364 (364)
T 1vyr_A 319 AVAFGRDYIANPDLVARLQKKAELNPQRPESFYG-GGAEGYTDYPSL 364 (364)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCSCCC
T ss_pred EEEECHHHHhChhHHHHHHcCCCCCCCCHHhccC-CCCCCcCCCCCC
Confidence 9999999999999999999999999999999998 677899999975
No 11
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=5.4e-84 Score=643.24 Aligned_cols=356 Identities=39% Similarity=0.677 Sum_probs=315.4
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCC--CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~--~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
+++||+|++||+++|||||||+||++.++ ++|.||+.+++||.+||+ +||||||++.|++.|..+++++++|+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (365)
T 2gou_A 2 TQSLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQI 80 (365)
T ss_dssp CTGGGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHH
Confidence 36799999999999999999999999887 589999999999999994 999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCC-Cccccc---CCC-cccCCCCCCCCChhHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPL-TPQIRA---NGV-DVAQFTPPRRLRTDEIPQI 181 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~-~~~~~~---~g~-~~~~~~~p~~mt~~eI~~i 181 (399)
++|++++++||++|+++++||+|+||++.+... .+.++++||+++. .+.... +|. .......|++||.+||+++
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~-~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~ 159 (365)
T 2gou_A 81 AGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNI-DGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQV 159 (365)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEECCTTSSCGGGT-TTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeecCCCccccccc-CCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHH
Confidence 999999999999999999999999999976542 3567899999886 311000 000 0001357999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFAN 261 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~ 261 (399)
+++|++||++|+++|||+||||++||||++|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~ 239 (365)
T 2gou_A 160 IADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997799999999655
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRAD 341 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 341 (399)
+.++.+..+.+++.++++.|++.|+|||+++.+.+... ....+++++.||+.+++|||++|++|+++|+++|++|.||
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA--PDTPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLAD 317 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC--CCccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcc
Confidence 54444456788899999999999999999998754211 1113467889999999999999999999999999999999
Q ss_pred EEEechHHhhCCcHHHHHHhCCCCCCCCcccccccCCCCCccccCCCC
Q 015862 342 LVVYGRLFLANPDLPRRFELNAPLNKYNRETFYTSDPVVGYTDYPFLN 389 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (399)
+|++||++++||||++|+++|.+++++++.+||+ ....||+|||++.
T Consensus 318 ~V~igR~~i~~P~l~~~~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~~ 364 (365)
T 2gou_A 318 MIGFGRPFIANPDLPERLRHGYPLAEHVPATLFG-GGEKGLTDYPTYQ 364 (365)
T ss_dssp EEECCHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCCCCCC
T ss_pred eehhcHHHHhCchHHHHHHcCCCCCCCchhhccC-CCCCCCCCCcCcC
Confidence 9999999999999999999999999999999998 6778999999874
No 12
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=6.3e-84 Score=636.44 Aligned_cols=316 Identities=27% Similarity=0.404 Sum_probs=286.9
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
++||+|++||+++|||||||+||+++++ .||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|++++
T Consensus 2 ~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~ 81 (343)
T 3kru_A 2 SILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVK 81 (343)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHH
T ss_pred ccccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHH
Confidence 6799999999999999999999999988 599999999999999998 88999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHH
Q 015862 108 AWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRL 187 (399)
Q Consensus 108 ~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~ 187 (399)
+||+++++||++|+++++||+|+||++.+ .+.++++||+++... ...+|++||.+||+++|++|++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~----~g~~~~apS~i~~~~----------~~~~p~~mt~~eI~~ii~~f~~ 147 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGRKCNI----SYEDVVGPSPIKAGD----------RYKLPRELSVEEIKSIVKAFGE 147 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCC----TTSCCEESSSCCSST----------TSCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEeeehhhccCccCc----chhhccCCCcCCCCc----------cccCchhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999998865 355689999988642 2467999999999999999999
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESG 266 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~ 266 (399)
||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+.+ +...
T Consensus 148 AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~-~~~~- 225 (343)
T 3kru_A 148 AAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD-YMEG- 225 (343)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC-SSTT-
T ss_pred HHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh-hhcc-
Confidence 999999999999999999999999999999999999999999999999999999999999988 8999999954 3222
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccc---cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTR---EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~---~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
+.+.+++.++++.|+++ +|+|+++.+..... ......+++++.||+.+++||+++|++ |+++|+++|++|.||+
T Consensus 226 -g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 226 -GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADL 303 (343)
T ss_dssp -SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred -CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHH
Confidence 34678899999999999 99999976543221 112235678899999999999999999 8999999999999999
Q ss_pred EEechHHhhCCcHHHHHHhCCC
Q 015862 343 VVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 343 V~~gR~~iadPdl~~k~~~g~~ 364 (399)
|++||++++||||++|++ |..
T Consensus 304 V~iGR~~lanPdl~~k~~-~~~ 324 (343)
T 3kru_A 304 VALGRELLRNPYWVLHTY-TSK 324 (343)
T ss_dssp EEESHHHHHCTTHHHHTC-SSG
T ss_pred HHHHHHHhcCCeEEEEEe-ccc
Confidence 999999999999999999 543
No 13
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=8.9e-84 Score=635.95 Aligned_cols=325 Identities=25% Similarity=0.379 Sum_probs=291.8
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCC-C-CCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRS-Y-NNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~-~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
++||+|++||+++|||||||+||+++++ . ||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|+++
T Consensus 3 ~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i 82 (340)
T 3gr7_A 3 TMLFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHI 82 (340)
T ss_dssp CSTTSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHH
T ss_pred hhcCCCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHH
Confidence 5799999999999999999999999888 4 99999999999999998 8899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFR 186 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~ 186 (399)
++||+++++||++|+++++||+|+||++.+ +.++++||+++... ....|++||.+||+++|++|+
T Consensus 83 ~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~----------~~~~p~~mt~~eI~~ii~~f~ 147 (340)
T 3gr7_A 83 AGLRELVGLVKEHGAAIGIQLAHAGRKSQV-----PGEIIAPSAVPFDD----------SSPTPKEMTKADIEETVQAFQ 147 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCS-----SSCCEESSSCCSST----------TSCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCccCC-----CCCccCCCCccccC----------CCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999864 45679999988642 246799999999999999999
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
+||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++ +.+|+||||+++...+
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~-- 224 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPD-- 224 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTT--
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCC--
Confidence 9999999999999999999999999999999999999999999999999999999999999 5589999999643322
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccc---cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTR---EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~---~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
+.+.+++.++++.|++.|+|+||++.+..... ......+++++.||+.+++||+++|++ |+++|+++|++|.||+
T Consensus 225 -g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~ 303 (340)
T 3gr7_A 225 -GLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADL 303 (340)
T ss_dssp -SCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred -CCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeE
Confidence 33567789999999999999999997653321 112235678899999999999999999 8999999999999999
Q ss_pred EEechHHhhCCcHHHHHHhCCCCCCCCcccc
Q 015862 343 VVYGRLFLANPDLPRRFELNAPLNKYNRETF 373 (399)
Q Consensus 343 V~~gR~~iadPdl~~k~~~g~~~~~~~~~~~ 373 (399)
|++||++++||||++|++++...+...+..|
T Consensus 304 V~iGR~~lanPdl~~ki~~~l~~~~~~~~~~ 334 (340)
T 3gr7_A 304 VFLGRELLRNPYWPYAAARELGAKISAPVQY 334 (340)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTCCCCCCGGG
T ss_pred EEecHHHHhCchHHHHHHHHCCCCCCCCchh
Confidence 9999999999999999999987654444444
No 14
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=1.6e-83 Score=636.91 Aligned_cols=325 Identities=26% Similarity=0.400 Sum_probs=291.3
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
++||+|++||+++|||||||+||+++.+ .||.||+.+++||++||+ |+||||||++.|++.|+.+++++++|+|++++
T Consensus 2 ~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~ 81 (349)
T 3hgj_A 2 ALLFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLP 81 (349)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHH
T ss_pred CcCCCCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHH
Confidence 6799999999999999999999999888 599999999999999998 89999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCeEEEecccCCCccCCCC--C---CCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHH
Q 015862 108 AWKPIVDAVHAKGGIFFCQIRHVGRVSNRDY--Q---PNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIV 182 (399)
Q Consensus 108 ~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~--~---~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii 182 (399)
+||+++++||++|+++++||+|+||++.+.. . ..+.++++||+++... ....|++||.+||+++|
T Consensus 82 ~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~----------~~~~p~~mt~~eI~~ii 151 (349)
T 3hgj_A 82 GLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDE----------GYPVPEPLDEAGMERIL 151 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSST----------TCCCCEECCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccC----------CCCCCccCCHHHHHHHH
Confidence 9999999999999999999999999987532 0 0145789999988643 14579999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|++||++|+++||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||+|+++.
T Consensus 152 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 152 QAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 79999999654
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc----cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHH
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR----EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~----~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
.. ++.+.+++.++++.|++.|+||||++.+..... ......+++++.||+.+++||+++|++ |+++|+++|+
T Consensus 232 ~~---~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 232 GE---GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQ 308 (349)
T ss_dssp ST---TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHH
T ss_pred cC---CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHH
Confidence 32 234577899999999999999999996543211 112235678899999999999999999 8999999999
Q ss_pred cCCCcEEEechHHhhCCcHHHHHHhCCCCCC
Q 015862 337 EGRADLVVYGRLFLANPDLPRRFELNAPLNK 367 (399)
Q Consensus 337 ~G~~D~V~~gR~~iadPdl~~k~~~g~~~~~ 367 (399)
+|.||+|++||++++||||++|++++...+.
T Consensus 309 ~G~aD~V~iGR~~lanPdl~~k~~~~l~~~~ 339 (349)
T 3hgj_A 309 AGSADLVLLGRVLLRDPYFPLRAAKALGVAP 339 (349)
T ss_dssp TTSCSEEEESTHHHHCTTHHHHHHHHTTCCC
T ss_pred CCCceEEEecHHHHhCchHHHHHHHHCCCCC
Confidence 9999999999999999999999999876543
No 15
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=3.8e-83 Score=637.13 Aligned_cols=325 Identities=25% Similarity=0.373 Sum_probs=290.3
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHhh
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEA 108 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~ 108 (399)
++||+|++||+++|||||||+||+++.+.||.||+.+++||++||+ |+||||||++.|++.|+.+++++++|+|+++++
T Consensus 2 ~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~ 81 (363)
T 3l5l_A 2 SALFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQA 81 (363)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHH
T ss_pred cccCCCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHH
Confidence 5799999999999999999999999777899999999999999998 889999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEecccCCCccCCCC-----------CCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhH
Q 015862 109 WKPIVDAVHAKGGIFFCQIRHVGRVSNRDY-----------QPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDE 177 (399)
Q Consensus 109 ~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~-----------~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~e 177 (399)
||+++++||++|+++++||+|+||++.+.. ...+.++++||+++.... ....|++||.+|
T Consensus 82 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~---------~~~~p~~mt~~e 152 (363)
T 3l5l_A 82 FVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAH---------LPKVPREMTLDD 152 (363)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTT---------BCCCCEECCHHH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCC---------CCCCCccCCHHH
Confidence 999999999999999999999999987421 123457899999886421 145799999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEe
Q 015862 178 IPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRL 256 (399)
Q Consensus 178 I~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrl 256 (399)
|+++|++|++||++|++|||||||||++||||++|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+|||
T Consensus 153 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRi 232 (363)
T 3l5l_A 153 IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARF 232 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 799999
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc----cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR----EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDG 331 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~----~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a 331 (399)
|+++ +...+ ..+.+++.++++.|++.|+||||++.+..... .......++++.||+.+++||+++|++ |+++|
T Consensus 233 s~~~-~~~~G-~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a 310 (363)
T 3l5l_A 233 GVLE-YDGRD-EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLA 310 (363)
T ss_dssp EEEC-SSSCH-HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHH
T ss_pred cchh-cCCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHH
Confidence 9853 32211 14678899999999999999999997653211 112234667889999999999999999 89999
Q ss_pred HHHHHcCCCcEEEechHHhhCCcHHHHHHhCCCC
Q 015862 332 NKAIAEGRADLVVYGRLFLANPDLPRRFELNAPL 365 (399)
Q Consensus 332 ~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~~ 365 (399)
+++|++|.||+|++||++++||||++|++++..+
T Consensus 311 ~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg~ 344 (363)
T 3l5l_A 311 EAALQANQLDLVSVGRAHLADPHWAYFAAKELGV 344 (363)
T ss_dssp HHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTTC
T ss_pred HHHHHCCCccEEEecHHHHhCchHHHHHHHHcCC
Confidence 9999999999999999999999999999988654
No 16
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=4.8e-83 Score=645.24 Aligned_cols=324 Identities=22% Similarity=0.278 Sum_probs=287.7
Q ss_pred cCccCCCcccc-CCeeeCCceeeCCCCCCCC-CCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHH
Q 015862 28 PVILFLTPYKM-GNFNLSHRVVLAPLTRQRS-YNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQ 105 (399)
Q Consensus 28 ~~~~Lf~P~~i-g~~~lkNRiv~apm~~~~~-~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~ 105 (399)
.|++||+|++| |+++|||||||+||+++++ .||.||+.+++||++||+|+||||||+++|++.|+.+++++++|+|++
T Consensus 23 ~~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~ 102 (419)
T 3l5a_A 23 RYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDAC 102 (419)
T ss_dssp TTGGGGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGG
T ss_pred chhhcCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHH
Confidence 57899999999 9999999999999999988 789999999999999998899999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDF 185 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f 185 (399)
+++||+++++||++|+++++||+|+||++.+... .+.+++|||+++.... ....|++||.+||+++|++|
T Consensus 103 i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~-~~~~~vapS~i~~~~~---------~~~~pr~mt~~eI~~ii~~F 172 (419)
T 3l5a_A 103 IPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAIL-NFGKVYGPSPMTLHSP---------IEHVVIAMSHEKINSIIQQY 172 (419)
T ss_dssp HHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHH-HHSEEEESSCEEECSS---------SSEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCCCccccccc-CCCceeCCCCCccccC---------CCCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999864321 1356799998765320 13468999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCch-hhhhHHHHHHHHHHHHHh----CCC-ceEEEecCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSL-ENRCRFALEIVEAVSNEI----GAD-RVGIRLSPF 259 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGsl-enR~r~~~eii~avR~~v----g~~-~v~vrls~~ 259 (399)
++||++|++|||||||||+||||||+|||||.+|+|+|+||||+ |||+||++|||++||+++ |++ +|+||||++
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 99999999999999999999999999999999999999999999 999999999999999999 666 799999996
Q ss_pred cccCCCCCCChHHHHHHHHHhhhh-hCceEEEEeCCCccc-----cc-ccCCCchhhHHHHhhc--CCcEEEeCCC-CHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNK-YGILYCHMVEPRMKT-----RE-EKSECPHSLLPMRKAF--KGTFLVAGGY-DRE 329 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~-~Gvd~l~v~~~~~~~-----~~-~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~ 329 (399)
+...+.. +.+.+++.++++.|++ .|+|||||+.+.... .. .....+++++.||+.+ ++|||++|+| |++
T Consensus 253 ~~~~~~~-G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e 331 (419)
T 3l5a_A 253 ETRGSDL-GYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPE 331 (419)
T ss_dssp EEETTEE-EECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHH
T ss_pred cccCCCC-CCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHH
Confidence 5443200 2356889999999999 999999999876411 11 1122456889999998 5899999999 999
Q ss_pred HHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 330 DGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 330 ~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
+|+++|++ ||+|+|||++++||||++|+++|++
T Consensus 332 ~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~~G~~ 364 (419)
T 3l5a_A 332 SALDALQH--ADMVGMSSPFVTEPDFVHKLAEQRP 364 (419)
T ss_dssp HHHHHGGG--CSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHh--CCcHHHHHHHHHCcHHHHHHHcCCc
Confidence 99999999 9999999999999999999999975
No 17
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=6.4e-78 Score=594.60 Aligned_cols=318 Identities=25% Similarity=0.372 Sum_probs=288.1
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCC--CCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQ 105 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~--~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~ 105 (399)
+++||+|++||+++|||||+|+||+++++ .||.||+.+++||++||+ |+||||||++.|++.|..+++++++|+|++
T Consensus 2 ~~~Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~ 81 (338)
T 1z41_A 2 ARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEH 81 (338)
T ss_dssp CCGGGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHH
T ss_pred ccccCCCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHH
Confidence 36799999999999999999999999887 489999999999999998 899999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDF 185 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f 185 (399)
+++|++++++||++|+++++||+|+||++.+. ..+++||+++... ....|++||.+||++++++|
T Consensus 82 ~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~-----~~~~~pS~~~~~~----------~~~~p~~mt~~eI~~~i~~~ 146 (338)
T 1z41_A 82 IEGFAKLTEQVKEQGSKIGIQLAHAGRKAELE-----GDIFAPSAIAFDE----------QSATPVEMSAEKVKETVQEF 146 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGCCCS-----SCCEESSSCCSST----------TSCCCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEecCCCcccCCC-----CCCcCCCCCCCCC----------CCCCCccCCHHHHHHHHHHH
Confidence 99999999999999999999999999998753 3579999988643 24579999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
++||++|+++|||+||||++||||++|||||.+|+|+|+||||+|||+||++||+++||+++ +.+|+|||++++...+
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~- 224 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDK- 224 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTT-
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999 5589999999653332
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc---cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR---EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~---~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
+.+.+++.++++.|++.|+||||++.+..... ......+++++.||+.+++||+++|++ |+++++++|++|.||
T Consensus 225 --g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 225 --GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRAD 302 (338)
T ss_dssp --SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCS
T ss_pred --CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCce
Confidence 34577899999999999999999998754311 111224577889999999999999999 899999999999999
Q ss_pred EEEechHHhhCCcHHHHHHhCCCC
Q 015862 342 LVVYGRLFLANPDLPRRFELNAPL 365 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~g~~~ 365 (399)
+|++||++++||||++|+++|.+.
T Consensus 303 ~V~iGR~~i~nPdl~~ki~~~~~~ 326 (338)
T 1z41_A 303 LIFIGRELLRDPFFARTAAKQLNT 326 (338)
T ss_dssp EEEECHHHHHCTTHHHHHHHHTTC
T ss_pred EEeecHHHHhCchHHHHHHcCCCc
Confidence 999999999999999999999764
No 18
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=2.9e-74 Score=617.77 Aligned_cols=344 Identities=23% Similarity=0.304 Sum_probs=293.8
Q ss_pred CcccCccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHH-HHHHHhhcC-CCcEEEEcccccCCCCCCCCCC-CCCC
Q 015862 25 IETPVILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHA-ILYYSQRTT-KGGFLIAEATGVSNTAQGNPNT-PSIW 101 (399)
Q Consensus 25 m~~~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~-~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~-~~l~ 101 (399)
|.+.|++||+|++||+++|||||+|+||++.+ |.+++.. ..||.+||+ |+||||||++.|++.+..++.. +++|
T Consensus 7 ~~~~~~~lf~p~~ig~~~l~NRiv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~ 83 (690)
T 3k30_A 7 VAAPYDVLFEPVQIGPFTTKNRFYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIW 83 (690)
T ss_dssp CCTTGGGGGCCCEETTEECSSSEEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECS
T ss_pred ccccchhcCCCeeECCEEECCCeEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccC
Confidence 45678999999999999999999999998753 4555544 456778888 8899999999999999988875 6999
Q ss_pred CHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHH
Q 015862 102 TKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQI 181 (399)
Q Consensus 102 ~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~i 181 (399)
+|+++++|++++++||++|+++++||+|+||++.... .+.++++||+++..... . ....|++||.+||+++
T Consensus 84 ~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~~~---~----~~~~p~~~t~~ei~~~ 154 (690)
T 3k30_A 84 DDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQL--SRETPLGPGHLPVAPDT---I----APIQARAMTKQDIDDL 154 (690)
T ss_dssp SGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTT--TCCCCEESSSCBSCSSC---C----CSCBCEECCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEccCCcccccccc--cCCCccCCCCCcccccc---c----CCCCCCcCCHHHHHHH
Confidence 9999999999999999999999999999999876432 46678999998765210 0 1457999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccch-hhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGY-LIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~Gy-Ll~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
+++|++||++|++|||||||||++||| ||+|||||.+|+|||+||||+|||+||++||+++||+++|++ +|+||||++
T Consensus 155 i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~ 234 (690)
T 3k30_A 155 RRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVE 234 (690)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcc
Confidence 999999999999999999999999999 999999999999999999999999999999999999999988 799999997
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-----c-cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-----R-EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-----~-~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
+.+.+ +.+.+++.++++.|++ ++|+++++.+.+.. . .....++++++.||+++++|||++|++ |+++|+
T Consensus 235 ~~~~~---g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~ 310 (690)
T 3k30_A 235 EEIDG---GITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMV 310 (690)
T ss_dssp CCSTT---SCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHH
T ss_pred ccCCC---CCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 54432 3356889999999998 79999998765321 1 112234567888999999999999999 899999
Q ss_pred HHHHcCCCcEEEechHHhhCCcHHHHHHhCCC-----CCCCC-c--------ccccccCCCCCccc
Q 015862 333 KAIAEGRADLVVYGRLFLANPDLPRRFELNAP-----LNKYN-R--------ETFYTSDPVVGYTD 384 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~-----~~~~~-~--------~~~~~~~~~~g~~~ 384 (399)
++|++|.||+|+|||++++||||++|+++|++ |..|+ | ...|.+||..|++.
T Consensus 311 ~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~vnp~~g~e~ 376 (690)
T 3k30_A 311 RQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCTQNPSMGEEW 376 (690)
T ss_dssp HHHHTTSCSEEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCSSCTTTTTTT
T ss_pred HHHHCCCcceEEEcHHhHhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCCcCcccCccc
Confidence 99999999999999999999999999999974 22221 1 23466899999984
No 19
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=2.8e-73 Score=608.44 Aligned_cols=337 Identities=24% Similarity=0.339 Sum_probs=294.9
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
|++||+|++||+++|||||+|+||+++++..+.+++.+++||++||+ |+||||||+++|++.|..+++++++|+|++++
T Consensus 2 ~~~lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~ 81 (671)
T 1ps9_A 2 YPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIP 81 (671)
T ss_dssp CTTTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHH
T ss_pred ccccCCCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHH
Confidence 57899999999999999999999998766445668999999999998 89999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHH
Q 015862 108 AWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRL 187 (399)
Q Consensus 108 ~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~ 187 (399)
+|++++++||++|+++++||+|+||++.+ ..+++||+++... ....|++||.+||++++++|++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~------~~~~~ps~~~~~~----------~~~~p~~~t~~ei~~~i~~~~~ 145 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGRYSYQ------PHLVAPSALQAPI----------NRFVPHELSHEEILQLIDNFAR 145 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGGGSBS------TTCEESSSCCCTT----------CSSCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCcccCC------CCCcCCCCccccc----------CCCCCccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999853 2579999987642 1347999999999999999999
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESG 266 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~ 266 (399)
||++|+++|||+||||++|||||+|||||.+|+|+|+||||+|||+||++||+++||+++|++ +|+||||+++...
T Consensus 146 aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~--- 222 (671)
T 1ps9_A 146 CAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE--- 222 (671)
T ss_dssp HHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST---
T ss_pred HHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC---
Confidence 999999999999999999999999999999999999999999999999999999999999988 7999999864322
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCccccc-------ccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE-------EKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~-------~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
++.+.+++.++++.|+++|+|||+++.+...... ....+.++++.+|+.+++||+++|++ |+++++++|++|
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g 302 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRG 302 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcC
Confidence 1346778999999999999999999854321110 11123467889999999999999999 999999999999
Q ss_pred CCcEEEechHHhhCCcHHHHHHhCCC-----CCCC----Ccc------cccccCCCCCccc
Q 015862 339 RADLVVYGRLFLANPDLPRRFELNAP-----LNKY----NRE------TFYTSDPVVGYTD 384 (399)
Q Consensus 339 ~~D~V~~gR~~iadPdl~~k~~~g~~-----~~~~----~~~------~~~~~~~~~g~~~ 384 (399)
.||+|++||++++||||++|+++|.+ |..| ... ..|.+||..|++.
T Consensus 303 ~aD~V~~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~~np~~~~e~ 363 (671)
T 1ps9_A 303 DADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHET 363 (671)
T ss_dssp SCSEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCSSCTTTTCTT
T ss_pred CCCEEEeCHHHHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEEeCccccccc
Confidence 99999999999999999999999974 3223 211 2367899999984
No 20
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=2e-73 Score=614.58 Aligned_cols=341 Identities=23% Similarity=0.287 Sum_probs=291.8
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCC-CCCCCCHHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPN-TPSIWTKEQV 106 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~-~~~l~~d~~i 106 (399)
|++||+|++||+++|||||+|+||+++++ ++.|+ .+++||++||+ |+||||||+++|++.+..++. ++++|+|+++
T Consensus 6 ~~~Lf~p~~ig~~~l~NRiv~apm~~~~~-~~~~~-~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~ 83 (729)
T 1o94_A 6 HDILFEPIQIGPKTLRNRFYQVPHCIGAG-SDKPG-FQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDV 83 (729)
T ss_dssp GGGGGSCEEETTEEESSSEEECCCCCSCT-TTCHH-HHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHH
T ss_pred hhhcCCCeeECCEEECCccEECCCcCCcC-CCCcH-HHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHh
Confidence 67899999999999999999999998665 34554 89999999998 899999999999999988775 5899999999
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFR 186 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~ 186 (399)
++|++++++||++|+++++||+|+||++.+.. .+.++++||+++.... ....|++||.+||++++++|+
T Consensus 84 ~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~~---------~~~~p~~~t~~eI~~~i~~f~ 152 (729)
T 1o94_A 84 RNLKAMTDEVHKYGALAGVELWYGGAHAPNME--SRATPRGPSQYASEFE---------TLSYCKEMDLSDIAQVQQFYV 152 (729)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCGGGSCCTT--TCCCCEESSCCBCSSS---------TTCBCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEecCCCccccccc--cCCCCcCCCccccccc---------CCCCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999987644 4567899999886421 135799999999999999999
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMES 265 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~ 265 (399)
+||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++||+++||+++|++ +|+||||+++.+...
T Consensus 153 ~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~ 232 (729)
T 1o94_A 153 DAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPG 232 (729)
T ss_dssp HHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTT
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988 799999996544222
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCc---ccc-----c-ccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRM---KTR-----E-EKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~---~~~-----~-~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
++. ..+++.++++.|++ ++|+++++.+.. ... + ....++++++.||+++++|||++|++ |+++|+++|
T Consensus 233 G~~-~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l 310 (729)
T 1o94_A 233 QIE-AEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIV 310 (729)
T ss_dssp SCC-TTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHH
T ss_pred CCC-chHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHH
Confidence 222 13567889999988 799999987642 110 1 11124567889999999999999999 899999999
Q ss_pred HcCCCcEEEechHHhhCCcHHHHHHhCCC-----CCCCC-c--c-------cccccCCCCCccc
Q 015862 336 AEGRADLVVYGRLFLANPDLPRRFELNAP-----LNKYN-R--E-------TFYTSDPVVGYTD 384 (399)
Q Consensus 336 ~~G~~D~V~~gR~~iadPdl~~k~~~g~~-----~~~~~-~--~-------~~~~~~~~~g~~~ 384 (399)
++|.||+|+|||++++||||++|+++|++ |..|. | . ..|.+||..|++.
T Consensus 311 ~~g~aD~V~~gR~~l~~P~~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~~n~~~g~e~ 374 (729)
T 1o94_A 311 TKGYADIIGCARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICTQNATAGEEY 374 (729)
T ss_dssp HTTSCSBEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCSSCTTTTTHH
T ss_pred HCCCCCEEEeCchhhcCchHHHHHHcCCccccccccccchhcccccccCCceeeccCccccccc
Confidence 99999999999999999999999999964 33332 1 2 2367899999873
No 21
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.3e-36 Score=297.34 Aligned_cols=226 Identities=15% Similarity=0.130 Sum_probs=182.6
Q ss_pred eeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHhhhHHHHHHHHHc
Q 015862 41 FNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEAWKPIVDAVHAK 119 (399)
Q Consensus 41 ~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~~~~l~~~vh~~ 119 (399)
++|||||++|||++. |+ ..||..+++ |+|+++||++.+++.+... . ..|+++ +|..
T Consensus 1 ~~l~nri~~APM~~~-------t~--~~~r~~~~~~G~gli~te~~~~~~~~~~~--------~---~~~~~l---~~~~ 57 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGY-------TD--SAFRTLAFEWGADFAFSEMVSAKGFLMNS--------Q---KTEELL---PQPH 57 (318)
T ss_dssp ----CEEEECCCTTT-------CS--HHHHHHHHTTTCCCEECSCEEHHHHHTTC--------H---HHHHHS---CCTT
T ss_pred CccCCCEEECCCCCC-------Cc--HHHHHHHHHHCcCEEEeCCEEEcccccCC--------H---hHHHhh---hCcC
Confidence 478999999999853 22 356766666 8999999998877543321 1 346666 8999
Q ss_pred CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCCE
Q 015862 120 GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDG 199 (399)
Q Consensus 120 g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDg 199 (399)
|.++++||+ |+. .++|+++|++++++ ||+
T Consensus 58 ~~~~~~QL~--g~~------------------------------------------------~~~~~~aa~~a~~~-~d~ 86 (318)
T 1vhn_A 58 ERNVAVQIF--GSE------------------------------------------------PNELSEAARILSEK-YKW 86 (318)
T ss_dssp CTTEEEEEE--CSC------------------------------------------------HHHHHHHHHHHTTT-CSE
T ss_pred CCeEEEEeC--CCC------------------------------------------------HHHHHHHHHHHHHh-CCE
Confidence 999999997 310 15799999999999 999
Q ss_pred EEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHH
Q 015862 200 VELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAE 279 (399)
Q Consensus 200 VeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~ 279 (399)
||||++| |..|.|+|+|||+++||.+++.|+|++||++++ .+|+||+++. +.. ++..++++
T Consensus 87 Iein~gc---------P~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~G-------~~~--~~~~~~a~ 147 (318)
T 1vhn_A 87 IDLNAGC---------PVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRLG-------WEK--NEVEEIYR 147 (318)
T ss_dssp EEEEECC---------CCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEESC-------SSS--CCHHHHHH
T ss_pred EEEECCC---------CcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC-CCEEEEecCC-------CCh--HHHHHHHH
Confidence 9999996 999999999999999999999999999999997 5899999872 111 12337899
Q ss_pred hhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHH
Q 015862 280 SLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 280 ~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
.+++.|+|+|+++.++..+.+.....++.++.+++ ++||+++|+| |+++++++|+++.||+|++||++++||+|+.+
T Consensus 148 ~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~ 225 (318)
T 1vhn_A 148 ILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQ 225 (318)
T ss_dssp HHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHH
T ss_pred HHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHH
Confidence 99999999999997754333333455677888888 8999999999 99999999996559999999999999999999
Q ss_pred HHh
Q 015862 359 FEL 361 (399)
Q Consensus 359 ~~~ 361 (399)
+++
T Consensus 226 ~~~ 228 (318)
T 1vhn_A 226 IKD 228 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 988
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=3.7e-35 Score=290.39 Aligned_cols=232 Identities=16% Similarity=0.151 Sum_probs=188.3
Q ss_pred eeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHhhhHHHHHHHHHcCC
Q 015862 42 NLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEAWKPIVDAVHAKGG 121 (399)
Q Consensus 42 ~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~~~~l~~~vh~~g~ 121 (399)
+|||||++|||.. +|+..++|+.+.+.|.||++||++.+++. ++++. +++++ +|..+.
T Consensus 1 ~l~nriv~APM~g-------~td~~~r~~~r~~Gg~gli~te~~~~~~~---------~~~~~-----~~~~~-~~~~~~ 58 (350)
T 3b0p_A 1 MLDPRLSVAPMVD-------RTDRHFRFLVRQVSLGVRLYTEMTVDQAV---------LRGNR-----ERLLA-FRPEEH 58 (350)
T ss_dssp -CCCSEEECCCTT-------TSSHHHHHHHHHHCSSSBEECCCEEHHHH---------HHSCH-----HHHHC-CCGGGC
T ss_pred CCCCCEEECCCCC-------CCHHHHHHHHHHcCCCCEEEeCCEEechh---------hcCCH-----HHHhc-cCCCCC
Confidence 4899999999963 57888888876664459999999876542 23332 46666 789999
Q ss_pred eEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEE
Q 015862 122 IFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGVE 201 (399)
Q Consensus 122 ~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVe 201 (399)
++++||+ |+ . .++|+++|++++++|||+||
T Consensus 59 p~~vQL~--g~------------------------------------~------------p~~~~~aA~~a~~~G~D~Ie 88 (350)
T 3b0p_A 59 PIALQLA--GS------------------------------------D------------PKSLAEAARIGEAFGYDEIN 88 (350)
T ss_dssp SEEEEEE--CS------------------------------------C------------HHHHHHHHHHHHHTTCSEEE
T ss_pred eEEEEeC--CC------------------------------------C------------HHHHHHHHHHHHHcCCCEEE
Confidence 9999996 21 0 16799999999999999999
Q ss_pred EccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhh
Q 015862 202 LHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESL 281 (399)
Q Consensus 202 Ih~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L 281 (399)
||++| |.+|.|+|+||++++||.+++.|+|++||++++ .+|.+|++...+ ...+.++..++++.+
T Consensus 89 In~gc---------P~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~-~PV~vKiR~g~~-----~~~~~~~~~~~a~~l 153 (350)
T 3b0p_A 89 LNLGC---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR-VPVTVKMRLGLE-----GKETYRGLAQSVEAM 153 (350)
T ss_dssp EEECC---------CSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS-SCEEEEEESCBT-----TCCCHHHHHHHHHHH
T ss_pred ECCcC---------CCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC-CceEEEEecCcC-----ccccHHHHHHHHHHH
Confidence 99996 999999999999999999999999999999984 478887764211 123456788999999
Q ss_pred hhhCceEEEEeCCCccccc-------ccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 282 NKYGILYCHMVEPRMKTRE-------EKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 282 e~~Gvd~l~v~~~~~~~~~-------~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
+++|+|+|+++.+.....+ ..+..+++++.+|+.+ ++||+++|+| |+++++++|+ | ||+|++||++++|
T Consensus 154 ~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-G-aD~V~iGRa~l~~ 231 (350)
T 3b0p_A 154 AEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-R-VDGVMLGRAVYED 231 (350)
T ss_dssp HHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-T-SSEEEECHHHHHC
T ss_pred HHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-C-CCEEEECHHHHhC
Confidence 9999999999976532111 1123567889999999 8999999999 9999999998 7 9999999999999
Q ss_pred CcHHHHHHhC
Q 015862 353 PDLPRRFELN 362 (399)
Q Consensus 353 Pdl~~k~~~g 362 (399)
|+|+++++++
T Consensus 232 P~l~~~i~~~ 241 (350)
T 3b0p_A 232 PFVLEEADRR 241 (350)
T ss_dssp GGGGTTHHHH
T ss_pred cHHHHHHHHH
Confidence 9999999864
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.96 E-value=2.4e-29 Score=247.48 Aligned_cols=250 Identities=13% Similarity=0.100 Sum_probs=189.6
Q ss_pred CccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCC-CCCCCCCCCCCCHHHH-----
Q 015862 34 TPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNT-AQGNPNTPSIWTKEQV----- 106 (399)
Q Consensus 34 ~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~-g~~~~~~~~l~~d~~i----- 106 (399)
-|++|++++|||||+++++. ..++ +||+.+++ |+|+|++|.+.+.+. +...+....+++|+.+
T Consensus 45 l~~~i~g~~l~npi~~aag~---~~~~-------~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 45 KPVNCMGLTFKNPLGLAAGL---DKDG-------ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCEEETTEEESSSEEECTTS---STTC-------CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCeEECCEEcCCCcEeCccc---CCcH-------HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 47999999999999999753 2233 26777777 899999999888753 4344444445555432
Q ss_pred ---hhhHHHHHHHHHc--CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHH
Q 015862 107 ---EAWKPIVDAVHAK--GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQI 181 (399)
Q Consensus 107 ---~~~~~l~~~vh~~--g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~i 181 (399)
++++++.+.+|+. +.++++||.-. ..+ +|+++
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~v~i~~~------------------------------------~~~-------~i~~~ 151 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAHYDGVLGINIGKN------------------------------------KDT-------PVEQG 151 (336)
T ss_dssp CCBCCHHHHHHHHHHCCCCSEEEEEECCC------------------------------------TTS-------CGGGT
T ss_pred CCCcCHHHHHHHHHhcccCCcEEEEecCC------------------------------------CCC-------ccccc
Confidence 5678888888874 46788888310 001 24567
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh-------CCC-ceE
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-------GAD-RVG 253 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v-------g~~-~v~ 253 (399)
+++|+++|+++.+ |||+||||++| |.+| |....++.+++.|++++||+++ |++ ||.
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~s---------P~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~ 215 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISS---------PNTP------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIA 215 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCC---------SSST------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEE
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccC---------CCCC------CcccccCHHHHHHHHHHHHHHHHhhhhcccccCceE
Confidence 8999999999976 99999999764 7766 2222345999999999999999 555 899
Q ss_pred EEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc-------------cccC----CCchhhHHHHhhc
Q 015862 254 IRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR-------------EEKS----ECPHSLLPMRKAF 316 (399)
Q Consensus 254 vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~-------------~~~~----~~~~~~~~ir~~~ 316 (399)
||++++ .+.++..++++.+++.|+|+|+++.+..... .... ..++.++.+++++
T Consensus 216 vKi~~~---------~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~ 286 (336)
T 1f76_A 216 VKIAPD---------LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL 286 (336)
T ss_dssp EECCSC---------CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH
T ss_pred EEecCC---------CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh
Confidence 999973 2456788999999999999999986532110 0010 1125677899998
Q ss_pred --CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CCcHHHHHHhC
Q 015862 317 --KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA-NPDLPRRFELN 362 (399)
Q Consensus 317 --~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia-dPdl~~k~~~g 362 (399)
++|||++||| |++++.++|+.| ||+|++||+++. ||+|++|+++|
T Consensus 287 ~~~ipVi~~GGI~~~~da~~~l~~G-Ad~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 287 NGRLPIIGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp TTSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHCC-CCEEEeeHHHHhcCcHHHHHHHhh
Confidence 7999999999 899999999999 999999999998 99999999875
No 24
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.92 E-value=1.1e-24 Score=212.03 Aligned_cols=244 Identities=15% Similarity=0.153 Sum_probs=175.9
Q ss_pred ccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCC-CCCCCCCC----------CCCCC
Q 015862 35 PYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSN-TAQGNPNT----------PSIWT 102 (399)
Q Consensus 35 P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~-~g~~~~~~----------~~l~~ 102 (399)
|++|++++|||||++||... +. + ..++...++ |+|+|+++.+.+.+ .|...|+. .++.+
T Consensus 3 ~~~i~g~~l~npv~~Aag~~--~~----~---~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 73 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVH--CM----T---IEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPN 73 (311)
T ss_dssp CEEETTEEESSSEEECTTSS--CS----S---HHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred ceEECCEEcCCCcEECCCCC--CC----C---HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 68899999999999998531 11 1 233344444 89999999988876 33332211 12222
Q ss_pred HHHHhhhHHHHHHHH-Hc--CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHH
Q 015862 103 KEQVEAWKPIVDAVH-AK--GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIP 179 (399)
Q Consensus 103 d~~i~~~~~l~~~vh-~~--g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~ 179 (399)
+. .+.+.+...... .. +.++++||..
T Consensus 74 ~g-~~~~~~~~~~~~~~~~~~~p~~~~i~g-------------------------------------------------- 102 (311)
T 1jub_A 74 LG-FDYYLDYVLKNQKENAQEGPIFFSIAG-------------------------------------------------- 102 (311)
T ss_dssp SC-HHHHHHHHHHHHHHTCSSSCCEEEECC--------------------------------------------------
T ss_pred cc-HHHHHHHHHHHHHhcCCCCCEEEEcCC--------------------------------------------------
Confidence 11 222222222222 33 5677777741
Q ss_pred HHHHHHHHHHHHHHHhCCC-EEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC
Q 015862 180 QIVNDFRLAARNAIEAGFD-GVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP 258 (399)
Q Consensus 180 ~ii~~f~~aA~~a~~aGfD-gVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~ 258 (399)
..+++|+++|+++.++||| +||||.+| |.+ .+.+.||+++++ +.|++++||++++ .||.+|+++
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~---------P~~-~g~~~~g~~~e~----~~~iv~~vr~~~~-~Pv~vKi~~ 167 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSC---------PNV-PGEPQLAYDFEA----TEKLLKEVFTFFT-KPLGVKLPP 167 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCC---------CCS-SSCCCGGGCHHH----HHHHHHHHTTTCC-SCEEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccC---------CCC-CCcccccCCHHH----HHHHHHHHHHhcC-CCEEEEECC
Confidence 0136799999999999999 99999765 777 678899888875 5899999999873 489999997
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCc-----c---c-cc----------ccC----CCchhhHHHHhh
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRM-----K---T-RE----------EKS----ECPHSLLPMRKA 315 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~-----~---~-~~----------~~~----~~~~~~~~ir~~ 315 (399)
+ .+.++..++++.++++|+|+|.++.... . . +. ... ..++.++.++++
T Consensus 168 ~---------~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~ 238 (311)
T 1jub_A 168 Y---------FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR 238 (311)
T ss_dssp C---------CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT
T ss_pred C---------CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh
Confidence 3 1355678899999999999999876531 1 0 00 011 124567889999
Q ss_pred c--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CCcHHHHHHhCC
Q 015862 316 F--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA-NPDLPRRFELNA 363 (399)
Q Consensus 316 ~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia-dPdl~~k~~~g~ 363 (399)
+ ++||+++||+ |++++.++|+.| ||+|++||+++. +|+|+++++++.
T Consensus 239 ~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 239 LKPEIQIIGTGGIETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp SCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchHHHhcCcHHHHHHHHHH
Confidence 9 8999999999 999999999998 999999999997 999999999874
No 25
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.92 E-value=8.8e-25 Score=212.87 Aligned_cols=245 Identities=15% Similarity=0.132 Sum_probs=175.0
Q ss_pred ccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCC-CCCCCCC----------CCCCC
Q 015862 35 PYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNT-AQGNPNT----------PSIWT 102 (399)
Q Consensus 35 P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~-g~~~~~~----------~~l~~ 102 (399)
|++|++++|||||++||+.. ++ +... +...++ |+|+|+++.+.+.+. |...++. .++.+
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~----~~--~~~~---~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVL----CS--TEED---LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CEEETTEEESSSEEECTTSS----CS--SHHH---HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred ceEECCEecCCCcEECCCCC----CC--CHHH---HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 78999999999999998752 11 1233 333344 899999998887763 3322211 12222
Q ss_pred HHHHhhhHHHHHHHHH-cCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHH
Q 015862 103 KEQVEAWKPIVDAVHA-KGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQI 181 (399)
Q Consensus 103 d~~i~~~~~l~~~vh~-~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~i 181 (399)
+. .+.+.+....... .+.++++||.. ..
T Consensus 76 ~g-~~~~~~~~~~~~~~~~~p~~~~i~g--------------------------------------------------~~ 104 (314)
T 2e6f_A 76 LG-FDFYLKYASDLHDYSKKPLFLSISG--------------------------------------------------LS 104 (314)
T ss_dssp SC-HHHHHHHHHHTCCTTTCCEEEEECC--------------------------------------------------SS
T ss_pred cC-HHHHHHHHHHHhhcCCCcEEEEeCC--------------------------------------------------CC
Confidence 11 1222221221111 24556666630 01
Q ss_pred HHHHHHHHHHHHHhCCC---EEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC
Q 015862 182 VNDFRLAARNAIEAGFD---GVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP 258 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfD---gVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~ 258 (399)
+++|+++|+++.++||| +||||.+| |.+ .|.+.||+++++ +.|++++||++++ .||.+|+++
T Consensus 105 ~~~~~~~a~~~~~~g~d~~~~iein~~~---------P~~-~g~~~~g~~~~~----~~~ii~~vr~~~~-~Pv~vK~~~ 169 (314)
T 2e6f_A 105 VEENVAMVRRLAPVAQEKGVLLELNLSC---------PNV-PGKPQVAYDFEA----MRTYLQQVSLAYG-LPFGVKMPP 169 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECCC---------CCS-TTCCCGGGSHHH----HHHHHHHHHHHHC-SCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCcCceEEEEcCC---------CCC-CCchhhcCCHHH----HHHHHHHHHHhcC-CCEEEEECC
Confidence 46799999999999999 99999765 777 688999988875 6899999999983 489999987
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhC-ceEEEEeCCCc-----c---c-c----------cccC----CCchhhHHHHh
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYG-ILYCHMVEPRM-----K---T-R----------EEKS----ECPHSLLPMRK 314 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~G-vd~l~v~~~~~-----~---~-~----------~~~~----~~~~~~~~ir~ 314 (399)
+ .+.++..++++.++++| +|+|.++.... . . + .... ..++.++.+++
T Consensus 170 ~---------~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~ 240 (314)
T 2e6f_A 170 Y---------FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR 240 (314)
T ss_dssp C---------CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH
T ss_pred C---------CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH
Confidence 3 23566788999999999 99999876431 0 0 0 0000 12456788999
Q ss_pred hc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CCcHHHHHHhCCC
Q 015862 315 AF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA-NPDLPRRFELNAP 364 (399)
Q Consensus 315 ~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia-dPdl~~k~~~g~~ 364 (399)
.+ ++||+++||+ |++++.++|+.| ||+|++||+++. +|+|+++++++..
T Consensus 241 ~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~ig~~~l~~~p~~~~~i~~~l~ 292 (314)
T 2e6f_A 241 RCPDKLVFGCGGVYSGEDAFLHILAG-ASMVQVGTALQEEGPGIFTRLEDELL 292 (314)
T ss_dssp HCTTSEEEEESSCCSHHHHHHHHHHT-CSSEEECHHHHHHCTTHHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchhhHhcCcHHHHHHHHHHH
Confidence 99 8999999999 899999999998 999999999997 9999999998753
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.92 E-value=3e-25 Score=215.50 Aligned_cols=243 Identities=14% Similarity=0.090 Sum_probs=176.5
Q ss_pred ccccCCeeeCCceeeCC-CCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCC-CC----------CCCCCC
Q 015862 35 PYKMGNFNLSHRVVLAP-LTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQG-NP----------NTPSIW 101 (399)
Q Consensus 35 P~~ig~~~lkNRiv~ap-m~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~-~~----------~~~~l~ 101 (399)
|++|++++|||||+++| |... ++.+ .+..+. |.|+++++.+.+.|.... .| +..+++
T Consensus 8 ~~~~~g~~l~npi~~aag~~~~-------~~~~---~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~ 77 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFGF-------GEEY---AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQ 77 (311)
T ss_dssp CEEETTEEESSSEEECTTSSTT-------STTG---GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCC
T ss_pred ceEECCEECCCCcEECCCCCCC-------CHHH---HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCC
Confidence 78999999999999999 5331 1112 222333 789999998776654221 11 123444
Q ss_pred CHHHHhhhHHHHHHHHH-c-CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHH
Q 015862 102 TKEQVEAWKPIVDAVHA-K-GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIP 179 (399)
Q Consensus 102 ~d~~i~~~~~l~~~vh~-~-g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~ 179 (399)
+...-..++++.+.+++ . +.++++||.. .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-------------------------------------~------------ 108 (311)
T 1ep3_A 78 NPGLEVIMTEKLPWLNENFPELPIIANVAG-------------------------------------S------------ 108 (311)
T ss_dssp BCCHHHHHHTHHHHHHHHCTTSCEEEEECC-------------------------------------S------------
T ss_pred CcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-------------------------------------C------------
Confidence 43322222445556665 5 7888888841 0
Q ss_pred HHHHHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC
Q 015862 180 QIVNDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP 258 (399)
Q Consensus 180 ~ii~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~ 258 (399)
.+++|.++|+++.+ +|||+||||.. ||.+|.|.+.||+ +.+++.|++++||++++ .+|.+|+++
T Consensus 109 -~~~~~~~~a~~~~~~~g~d~iei~~~---------~p~~~~g~~~~g~----~~~~~~eii~~v~~~~~-~pv~vk~~~ 173 (311)
T 1ep3_A 109 -EEADYVAVCAKIGDAANVKAIELNIS---------CPNVKHGGQAFGT----DPEVAAALVKACKAVSK-VPLYVKLSP 173 (311)
T ss_dssp -SHHHHHHHHHHHTTSTTEEEEEEECC---------SEEGGGTTEEGGG----CHHHHHHHHHHHHHHCS-SCEEEEECS
T ss_pred -CHHHHHHHHHHHhccCCCCEEEEeCC---------CCCCCCchhhhcC----CHHHHHHHHHHHHHhcC-CCEEEEECC
Confidence 03568999999998 99999999954 5888999888885 57899999999999984 489999986
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc--------cc--------cccCCC----chhhHHHHhhcCC
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK--------TR--------EEKSEC----PHSLLPMRKAFKG 318 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~--------~~--------~~~~~~----~~~~~~ir~~~~~ 318 (399)
+. . +..++++.+++.|+|+|+++..... .+ ...... +++++.+++.+++
T Consensus 174 ~~-------~----~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~i 242 (311)
T 1ep3_A 174 NV-------T----DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDI 242 (311)
T ss_dssp CS-------S----CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSS
T ss_pred Ch-------H----HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCC
Confidence 31 1 1346788899999999999542100 00 011111 2567788888999
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCC
Q 015862 319 TFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNA 363 (399)
Q Consensus 319 pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~ 363 (399)
||+++||+ |++++.++|+.| ||+|++||+++.+|+++++++++.
T Consensus 243 pvia~GGI~~~~d~~~~l~~G-Ad~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 243 PIIGMGGVANAQDVLEMYMAG-ASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp CEEECSSCCSHHHHHHHHHHT-CSEEEECTHHHHCTTHHHHHHHHH
T ss_pred CEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHcCcHHHHHHHHHH
Confidence 99999999 899999999999 999999999999999999999874
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.91 E-value=2.3e-24 Score=217.99 Aligned_cols=247 Identities=12% Similarity=0.058 Sum_probs=179.7
Q ss_pred ccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCC-CCCCCCCCCCCCCH-HHH-----
Q 015862 35 PYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSN-TAQGNPNTPSIWTK-EQV----- 106 (399)
Q Consensus 35 P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~-~g~~~~~~~~l~~d-~~i----- 106 (399)
|++|++++|||||++|++... ++ .+|+.+++ |+|+|+++.+...+ .|+..|+...+.++ ..+
T Consensus 83 ~~~i~Gl~~~NPvglAAG~dk---~~-------~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~Gf 152 (443)
T 1tv5_A 83 CTNIKHLDFINPFGVAAGFDK---NG-------VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGF 152 (443)
T ss_dssp CEEETTEEESSSEEECTTTTT---TC-------SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCS
T ss_pred CeEECCEEeCCCcEECCcccC---cc-------HHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeecccc
Confidence 689999999999999988532 22 23555676 89999999887765 34444443322232 223
Q ss_pred --hhhHHHHHHHHHc-----------CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCC
Q 015862 107 --EAWKPIVDAVHAK-----------GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRL 173 (399)
Q Consensus 107 --~~~~~l~~~vh~~-----------g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~m 173 (399)
+++..+++.+++. ...+++||.-. .
T Consensus 153 nN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~------------------------------------~------ 190 (443)
T 1tv5_A 153 NNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKN------------------------------------K------ 190 (443)
T ss_dssp CBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCC------------------------------------T------
T ss_pred CChhHHHHHHHHHHHhhhcccccccCCceEEEEecCc------------------------------------c------
Confidence 5666777777642 23466666310 0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCccc-CCCCCCCCchhhhhHHHHHHHHHHHHHh-----
Q 015862 174 RTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVN-DRTDQYGGSLENRCRFALEIVEAVSNEI----- 247 (399)
Q Consensus 174 t~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N-~R~D~yGGslenR~r~~~eii~avR~~v----- 247 (399)
++.+.+++|+++|+++.+ ++|+||||.+| |.++ .|.+ ...+++.+|+++||+++
T Consensus 191 ---~~~~~~~dy~~~a~~l~~-~aD~ieiNisc---------Pnt~Glr~l-------q~~~~l~~il~~v~~~~~~~~~ 250 (443)
T 1tv5_A 191 ---DTVNIVDDLKYCINKIGR-YADYIAINVSS---------PNTPGLRDN-------QEAGKLKNIILSVKEEIDNLEK 250 (443)
T ss_dssp ---TCSCHHHHHHHHHHHHGG-GCSEEEEECCC---------TTSTTGGGG-------GSHHHHHHHHHHHHHHHHHHC-
T ss_pred ---cchHHHHHHHHHHHHHhc-CCCEEEEeccC---------CCCcccccc-------cCHHHHHHHHHHHHHHHhhhcc
Confidence 112368999999999886 89999999987 6664 3333 34478999999999864
Q ss_pred -------------------------------------------CCC-c-eEEEecCCcccCCCCCCChHHHHHHHHHhhh
Q 015862 248 -------------------------------------------GAD-R-VGIRLSPFANYMESGDSNPEALGLYMAESLN 282 (399)
Q Consensus 248 -------------------------------------------g~~-~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le 282 (399)
+.+ | |.||++++ .+.++..++++.++
T Consensus 251 ~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd---------~~~ed~~~iA~~~~ 321 (443)
T 1tv5_A 251 NNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLL 321 (443)
T ss_dssp -------------------------------------CCCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCC---------CCHHHHHHHHHHHH
Confidence 123 7 89999983 23457888999999
Q ss_pred hhCceEEEEeCCCcccccc-----------cC----CCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEE
Q 015862 283 KYGILYCHMVEPRMKTREE-----------KS----ECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVV 344 (399)
Q Consensus 283 ~~Gvd~l~v~~~~~~~~~~-----------~~----~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 344 (399)
+.|+|+|.++.+....... .. ..++.++.+++++ ++|||++||| |+++|.++|+.| ||+|+
T Consensus 322 ~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG-Ad~Vq 400 (443)
T 1tv5_A 322 ETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQ 400 (443)
T ss_dssp HTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT-EEEEE
T ss_pred HcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC-CCEEE
Confidence 9999999998765321100 00 0235678899999 8999999999 999999999999 99999
Q ss_pred echHHhh-CCcHHHHHHhCC
Q 015862 345 YGRLFLA-NPDLPRRFELNA 363 (399)
Q Consensus 345 ~gR~~ia-dPdl~~k~~~g~ 363 (399)
+||+++. +|+|+++++++.
T Consensus 401 igrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 401 LYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp ESHHHHHHGGGHHHHHHHHH
T ss_pred EcHHHHhcChHHHHHHHHHH
Confidence 9999887 999999999875
No 28
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.83 E-value=2.5e-19 Score=176.51 Aligned_cols=269 Identities=13% Similarity=0.128 Sum_probs=168.4
Q ss_pred ccCCCchhHHhhhhhhhcCCCCCCcccCccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEE
Q 015862 2 LLNIGSRAKEAKQNQEENNDNMAIETPVILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLI 81 (399)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii 81 (399)
||-.||--.-+-+.|+-.-+++.+ +.++.+++|||.|+.|+=.- +. +.+.++++.. + |+|-|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~L---------~~~~~Gl~~~NPv~lAAG~~-----~~-~~e~~~~l~~-~-G~G~v~ 76 (354)
T 4ef8_A 14 LVPAGSHMASMTGGQQMGRGSMSL---------QVNLLNNTFANPFMNAAGVM-----CT-TTEELVAMTE-S-ASGSLV 76 (354)
T ss_dssp --------------------CCCC---------CEEETTEEESSSEEECTTSS-----CS-SHHHHHHHHH-S-SCSCEE
T ss_pred cccCcccccccCchhhcCCCCCCc---------ceEECCEECCCCCEeccCCC-----CC-CHHHHHHHHH-c-CCCeEE
Confidence 455666666666666655554443 36789999999999887532 11 3444444443 2 688888
Q ss_pred EcccccCC-CCCCCCCC----------CCCCCHHHHhhhHHHHHHHH-HcCCeEEEecccCCCccCCCCCCCCCCCcccC
Q 015862 82 AEATGVSN-TAQGNPNT----------PSIWTKEQVEAWKPIVDAVH-AKGGIFFCQIRHVGRVSNRDYQPNGQAPISCT 149 (399)
Q Consensus 82 ~e~~~V~~-~g~~~~~~----------~~l~~d~~i~~~~~l~~~vh-~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps 149 (399)
+..+...+ .|...|+. +++.++ -++.|.+.....+ ..+.++++||.-
T Consensus 77 ~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~-G~~~~~~~l~~~~~~~~~pvivsI~G-------------------- 135 (354)
T 4ef8_A 77 SKSCTPALREGNPTPRYQALPLGSINSMGLPNN-GFDFYLAYAAEQHDYGKKPLFLSMSG-------------------- 135 (354)
T ss_dssp EEEECSSCBCCSCSCCEEEETTEEEECCCCCBC-CHHHHHHHHHHTCCTTTCCEEEEECC--------------------
T ss_pred eCcccCcccCCCCCCcEEecchhhhccCCCCCc-CHHHHHHHHHHHhhcCCCcEEEEecc--------------------
Confidence 88765554 34443321 222221 1222211111221 235678888741
Q ss_pred CCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHH---HhCCCEEEEccccchhhhhcccCcccCCCCCCC
Q 015862 150 DKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAI---EAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYG 226 (399)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~---~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yG 226 (399)
.. .++|+++|+++. ++|+|+||||.+| |.+ .. |
T Consensus 136 ------------------~~------------~~d~~~~a~~l~~~~~~g~d~ielNisC---------Pn~--~g---g 171 (354)
T 4ef8_A 136 ------------------LS------------MRENVEMCKRLAAVATEKGVILELNLSC---------PNV--PG---K 171 (354)
T ss_dssp ------------------SS------------HHHHHHHHHHHHHHHHHHCCEEEEECSS---------CCS--TT---S
T ss_pred ------------------CC------------HHHHHHHHHHHhhhhhcCCCEEEEeCCC---------CCC--CC---c
Confidence 00 257899999988 6899999999998 543 21 3
Q ss_pred CchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhC-ceEEEEeCCC----------
Q 015862 227 GSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG-ILYCHMVEPR---------- 295 (399)
Q Consensus 227 GslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~G-vd~l~v~~~~---------- 295 (399)
..+......+.+++++||+++. -||.||++++ .+.++..++++.+++.| +|.|.++...
T Consensus 172 ~~l~~~~e~~~~il~av~~~~~-~PV~vKi~p~---------~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~ 241 (354)
T 4ef8_A 172 PQVAYDFDAMRQCLTAVSEVYP-HSFGVKMPPY---------FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAET 241 (354)
T ss_dssp CCGGGSHHHHHHHHHHHHHHCC-SCEEEEECCC---------CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTT
T ss_pred hhhccCHHHHHHHHHHHHHhhC-CCeEEEecCC---------CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccC
Confidence 3565556778999999999984 3899999983 13556778888888998 9999764321
Q ss_pred cc------cc---cccC----CCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC-CcHHHHH
Q 015862 296 MK------TR---EEKS----ECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN-PDLPRRF 359 (399)
Q Consensus 296 ~~------~~---~~~~----~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad-Pdl~~k~ 359 (399)
.. .. .... ..++.+..+++.+ ++|||++||| |++++.++|..| ||+|++||+++.| |+|++++
T Consensus 242 ~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aG-Ad~V~vgra~l~~GP~~~~~i 320 (354)
T 4ef8_A 242 ESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERL 320 (354)
T ss_dssp TEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHH
T ss_pred CccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEhHHHHHhCHHHHHHH
Confidence 00 00 0111 1245677888887 6999999999 999999999998 9999999999999 9999999
Q ss_pred HhCC
Q 015862 360 ELNA 363 (399)
Q Consensus 360 ~~g~ 363 (399)
.++.
T Consensus 321 ~~~l 324 (354)
T 4ef8_A 321 TSEL 324 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 29
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.82 E-value=6.1e-19 Score=173.26 Aligned_cols=269 Identities=13% Similarity=0.154 Sum_probs=165.9
Q ss_pred cCCCchhHHhhhhhhhcCCCCCCcccCccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEE
Q 015862 3 LNIGSRAKEAKQNQEENNDNMAIETPVILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIA 82 (399)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~m~~~~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~ 82 (399)
|--||---.+-.-|+-....|. .| +.++.+++|||+|+.|+=.. +. +.+.++++.. . |+|.|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~m~------~L--~~~~~Gl~~~NPv~lAaG~~-----~~-~~e~~~~~~~-~-G~G~v~~ 78 (345)
T 3oix_A 15 VPRGSHMASMTGGQQMGRGSMV------ST--HTTIGSFDFDNCLMNAAGVY-----CM-TREELAAIDH-S-EAGSFVT 78 (345)
T ss_dssp ---------------------C------CC--CEEETTEEESCSEEECTTSS-----CS-SHHHHHHHHT-S-SCSBCBC
T ss_pred ccCCCcccccCccccccccccC------Cc--CeEECCEECCCCCEEcCCCC-----CC-CHHHHHHHHH-c-CCCeEEe
Confidence 3334444444455555555552 22 47899999999999885422 11 2344444432 1 7899988
Q ss_pred cccccCC-CCCCCCCC----------CCCCCHHHHhhh-HHHHHHH-HHcCCeEEEecccCCCccCCCCCCCCCCCcccC
Q 015862 83 EATGVSN-TAQGNPNT----------PSIWTKEQVEAW-KPIVDAV-HAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCT 149 (399)
Q Consensus 83 e~~~V~~-~g~~~~~~----------~~l~~d~~i~~~-~~l~~~v-h~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps 149 (399)
+.+...| .|...|+. +++-++- ++.| +++.... +..+.++++||.-
T Consensus 79 ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G-~~~~~~~l~~~~~~~~~~pvivsI~g-------------------- 137 (345)
T 3oix_A 79 XTGTLEERAGNPQPRYADTKLGSINSMGLPNLG-INYYLDYVTELQKQPDSKNHFLSLVG-------------------- 137 (345)
T ss_dssp CCBCSSCBCCSCSCCEEECSSEEEECCCCCBSC-HHHHHHHHHHHHHSTTCCCCEEEECC--------------------
T ss_pred eeecCCCCCCCCCCcEEecccchhccCCCCChh-HHHHHHHHHHHhhccCCCCEEEEecC--------------------
Confidence 8776654 34444421 2222221 2222 2222222 2357788888841
Q ss_pred CCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCC-EEEEccccchhhhhcccCcccCCCCCCCCc
Q 015862 150 DKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFD-GVELHGAHGYLIDQFLKDQVNDRTDQYGGS 228 (399)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfD-gVeIh~~~GyLl~qFlSp~~N~R~D~yGGs 228 (399)
. -.++|+++|+++.++|+| +||||.+| |.+. . |..
T Consensus 138 -----------------~-------------~~~d~~~~a~~l~~~g~~d~ielNisC---------Pn~~---G--~~~ 173 (345)
T 3oix_A 138 -----------------M-------------SPEETHTILXMVEASKYQGLVELNLSC---------PNVP---G--XPQ 173 (345)
T ss_dssp -----------------S-------------SHHHHHHHHHHHHHSSCCSEEEEECSC---------CCST---T--CCC
T ss_pred -----------------C-------------CHHHHHHHHHHHhccCCCcEEEEecCC---------CCcC---C--chh
Confidence 0 036799999999999998 99999998 5442 1 234
Q ss_pred hhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe----------CCCccc
Q 015862 229 LENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV----------EPRMKT 298 (399)
Q Consensus 229 lenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~----------~~~~~~ 298 (399)
+......+.+++++||+++. .||.||++++ .+.++..++++.+...|+++++.+ ......
T Consensus 174 l~~~~e~l~~il~av~~~~~-~PV~vKi~p~---------~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~ 243 (345)
T 3oix_A 174 IAYDFETTDQILSEVFTYFT-KPLGIKLPPY---------FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVI 243 (345)
T ss_dssp GGGCHHHHHHHHHHHTTTCC-SCEEEEECCC---------CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESC
T ss_pred hcCCHHHHHHHHHHHHHHhC-CCeEEEECCC---------CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCcccc
Confidence 55556788999999999884 3899999983 134555566666656667776533 111000
Q ss_pred ----c---cccCCC----chhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechH-HhhCCcHHHHHHhCC
Q 015862 299 ----R---EEKSEC----PHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRL-FLANPDLPRRFELNA 363 (399)
Q Consensus 299 ----~---~~~~~~----~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~-~iadPdl~~k~~~g~ 363 (399)
. ...++. ++.+..+++++ ++|||++||| |++++.++|+.| ||+|++||+ ++.+|+|+.++.++.
T Consensus 244 ~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~~~L 322 (345)
T 3oix_A 244 XPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRITKEL 322 (345)
T ss_dssp SGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred ccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHHHHH
Confidence 0 011122 45778899999 6999999999 999999999998 999999999 899999999998874
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.80 E-value=1.9e-18 Score=192.38 Aligned_cols=248 Identities=14% Similarity=0.146 Sum_probs=169.9
Q ss_pred ccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCCC--CCCCCCCC--------------
Q 015862 35 PYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSNT--AQGNPNTP-------------- 98 (399)
Q Consensus 35 P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~--g~~~~~~~-------------- 98 (399)
++++.|++++|+|+++||+... +..+...+.. + |.|+++++.+...+. +...|...
T Consensus 534 s~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~-~-g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~ 605 (1025)
T 1gte_A 534 SVEMAGLKFINPFGLASAAPTT------SSSMIRRAFE-A-GWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQS 605 (1025)
T ss_dssp CEEETTEEESSSEEECSSGGGS------SHHHHHHHHH-H-TCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCS
T ss_pred eeeeccccccCcccccCCCCCC------CHHHHHHHHH-C-CcCeEEeceecccccccCCCCccEEeccccccccCCchh
Confidence 4778899999999999996531 2333332222 1 789998876654321 22111100
Q ss_pred -----CCCCHHHHhhhHHHHHHHHHc--CCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCC
Q 015862 99 -----SIWTKEQVEAWKPIVDAVHAK--GGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPR 171 (399)
Q Consensus 99 -----~l~~d~~i~~~~~l~~~vh~~--g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~ 171 (399)
.+++...++.|.+-+..+++. +.++++|+.- | . .
T Consensus 606 ~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~-g-----------------------------------~-~-- 646 (1025)
T 1gte_A 606 SFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMC-S-----------------------------------Y-N-- 646 (1025)
T ss_dssp CEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECC-C-----------------------------------S-C--
T ss_pred heeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecC-C-----------------------------------C-C--
Confidence 012223344444434444442 5677777731 0 0 0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++|.++|+++.++|||+|+||++| |.. .+.+.||++++++.+++.+++++||++++ -|
T Consensus 647 ----------~~~~~~~a~~~~~~g~d~iein~~~---------P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~P 705 (1025)
T 1gte_A 647 ----------KNDWMELSRKAEASGADALELNLSC---------PHG-MGERGMGLACGQDPELVRNICRWVRQAVQ-IP 705 (1025)
T ss_dssp ----------HHHHHHHHHHHHHTTCSEEEEECCC---------BCC-CC-----SBGGGCHHHHHHHHHHHHHHCS-SC
T ss_pred ----------HHHHHHHHHHHHhcCCCEEEEECCC---------CCC-CCCCCcccccccCHHHHHHHHHHHHHhhC-Cc
Confidence 2568999999999999999999876 666 67789999999999999999999999983 48
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCC----------------------cccccccCCC----
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPR----------------------MKTREEKSEC---- 305 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~----------------------~~~~~~~~~~---- 305 (399)
|.+|++++- . +..++++.+++.|+|+|+++... ........+.
T Consensus 706 v~vK~~~~~-------~----~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~ 774 (1025)
T 1gte_A 706 FFAKLTPNV-------T----DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIA 774 (1025)
T ss_dssp EEEEECSCS-------S----CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHH
T ss_pred eEEEeCCCh-------H----HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHH
Confidence 999998731 1 25678999999999999984211 0000011112
Q ss_pred chhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CCcHHHHHHhC
Q 015862 306 PHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA-NPDLPRRFELN 362 (399)
Q Consensus 306 ~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia-dPdl~~k~~~g 362 (399)
+..+..+++++ ++|||++||| |++++.++|+.| +|+|++||+++. +|.+++++.++
T Consensus 775 ~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~G-a~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 775 LRAVTTIARALPGFPILATGGIDSAESGLQFLHSG-ASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp HHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTSCTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcC-CCEEEEeeccccCCccHHHHHHHH
Confidence 24677888988 8999999999 999999999988 999999999997 88899888765
No 31
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.80 E-value=2.2e-18 Score=170.75 Aligned_cols=249 Identities=12% Similarity=0.051 Sum_probs=167.9
Q ss_pred ccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcCCCcEEEEcccccCC-CCCCCCCC------------CCCC
Q 015862 35 PYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGFLIAEATGVSN-TAQGNPNT------------PSIW 101 (399)
Q Consensus 35 P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~-~g~~~~~~------------~~l~ 101 (399)
+.++.+++++|.|+.|+=... +| +.+..++. . |+|.|+++.+...| .|...|+. +|+-
T Consensus 51 ~~~~~Gl~~~NPvglAaG~~~---~~---~~~~~~~~--~-g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~ 121 (367)
T 3zwt_A 51 EVRVLGHKFRNPVGIAAGFDK---HG---EAVDGLYK--M-GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFN 121 (367)
T ss_dssp CEEETTEEESSSEEECTTSST---TS---SSHHHHHH--T-TCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCC
T ss_pred cEEECCEEcCCCCEeCCCcCC---CH---HHHHHHHh--c-CcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCC
Confidence 478899999999999964221 33 22333332 1 78999998766554 34444431 2222
Q ss_pred C---HHHHhhhHHHHHH---HHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCCh
Q 015862 102 T---KEQVEAWKPIVDA---VHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRT 175 (399)
Q Consensus 102 ~---d~~i~~~~~l~~~---vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~ 175 (399)
+ +..++.+++..+. .+..+.++++||... . .|.
T Consensus 122 N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn-----~------------------------------------~t~ 160 (367)
T 3zwt_A 122 SHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKN-----K------------------------------------TSV 160 (367)
T ss_dssp BCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCC-----T------------------------------------TCS
T ss_pred CccHHHHHHHHHHHhhhccccccCCceEEEEEecC-----C------------------------------------CCC
Confidence 2 2222222221111 223578999999410 0 010
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh------CC
Q 015862 176 DEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI------GA 249 (399)
Q Consensus 176 ~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v------g~ 249 (399)
.-+++|+++|+.+.+ ++|+||||.+| | |.. |+.+......+.+++++|+++. -+
T Consensus 161 ----~~~~dy~~~~~~~~~-~ad~ielNisC---------P--n~~----G~~~l~~~~~l~~ll~av~~~~~~~~~~~~ 220 (367)
T 3zwt_A 161 ----DAAEDYAEGVRVLGP-LADYLVVNVSS---------P--NTA----GLRSLQGKAELRRLLTKVLQERDGLRRVHR 220 (367)
T ss_dssp ----CHHHHHHHHHHHHGG-GCSEEEEECCC---------T--TST----TGGGGGSHHHHHHHHHHHHHHHHTSCGGGC
T ss_pred ----cCHHHHHHHHHHHhh-hCCEEEEECCC---------C--CCC----CccccCCHHHHHHHHHHHHHHHhhccccCC
Confidence 135788999988864 68999999999 4 333 3333334567889999998762 12
Q ss_pred CceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc-------------ccCC----CchhhHHH
Q 015862 250 DRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE-------------EKSE----CPHSLLPM 312 (399)
Q Consensus 250 ~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~-------------~~~~----~~~~~~~i 312 (399)
-||.||++++ .+.++..++++.++++|+|.|.++........ ...+ .++.++.+
T Consensus 221 ~Pv~vKi~p~---------~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i 291 (367)
T 3zwt_A 221 PAVLVKIAPD---------LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREM 291 (367)
T ss_dssp CEEEEEECSC---------CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHH
T ss_pred ceEEEEeCCC---------CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHH
Confidence 3899999983 23466888999999999999999865432110 0111 13567889
Q ss_pred Hhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh-hCCcHHHHHHhCC
Q 015862 313 RKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFL-ANPDLPRRFELNA 363 (399)
Q Consensus 313 r~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~i-adPdl~~k~~~g~ 363 (399)
++++ ++|||++||| |+++|.++|+.| ||+|++||+++ .+|+|+.++.++.
T Consensus 292 ~~~v~~~ipvI~~GGI~s~~da~~~l~~G-Ad~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 292 YALTQGRVPIIGVGGVSSGQDALEKIRAG-ASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HHHTTTCSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHcCCCceEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHhcCcHHHHHHHHHH
Confidence 9999 7999999999 999999999998 99999999995 6899999998874
No 32
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.76 E-value=2.8e-17 Score=164.19 Aligned_cols=249 Identities=13% Similarity=0.076 Sum_probs=166.3
Q ss_pred CccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCC-CCCCCCCCC------------C
Q 015862 34 TPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSN-TAQGNPNTP------------S 99 (399)
Q Consensus 34 ~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~-~g~~~~~~~------------~ 99 (399)
-+.++.++++||.|.+|+=... +|. . +..... |+|.|.++.+...| .|+..|+.. |
T Consensus 84 l~v~~~Gl~f~NPvglAAG~dk---~~~---~----~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~G 153 (415)
T 3i65_A 84 ACTNIKHLDFINPFGVAAGFDK---NGV---C----IDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCG 153 (415)
T ss_dssp GCEEETTEEESSSEEECTTSST---TCS---S----HHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCC
T ss_pred ccEEECCEECCCCCEECCCCCC---CHH---H----HHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCC
Confidence 3678999999999999885422 332 1 233334 89999888765543 344444321 2
Q ss_pred CCC---HHHHhhhHHHHHHHH----HcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCC
Q 015862 100 IWT---KEQVEAWKPIVDAVH----AKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRR 172 (399)
Q Consensus 100 l~~---d~~i~~~~~l~~~vh----~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~ 172 (399)
+-+ +..++.+++.-.... ..+..+++||.- + ..++
T Consensus 154 fnN~G~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~-----n-------------------------------k~t~-- 195 (415)
T 3i65_A 154 FNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGK-----N-------------------------------KDTV-- 195 (415)
T ss_dssp SCBCCHHHHHHHHHHHHHHHTTCGGGTTCEEEEEECC-----C-------------------------------TTCS--
T ss_pred CCchhHHHHHHHHHHHHhhccccccccCceEEEEecc-----c-------------------------------cCcc--
Confidence 222 223333332211100 013567788831 0 0011
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC----
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG---- 248 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg---- 248 (399)
+.+++|+++++++.+. +|.||||.+| |.+ - |..+......+.+++++||+++.
T Consensus 196 -------~~~~Dy~~~a~~l~~~-ad~ieiNiSc---------PNt--~----Gl~~lq~~~~l~~ll~aV~~~~~~~~~ 252 (415)
T 3i65_A 196 -------NIVDDLKYCINKIGRY-ADYIAINVSS---------PNT--P----GLRDNQEAGKLKNIILSVKEEIDNLEK 252 (415)
T ss_dssp -------CHHHHHHHHHHHHGGG-CSEEEEECCC---------CC--------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHhh-CCEEEEECCC---------CCC--C----CcccccCHHHHHHHHHHHHHHHHhhcc
Confidence 2478999999998877 9999999998 443 1 33333445688899999998741
Q ss_pred ---------------CCc-eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc-----------c
Q 015862 249 ---------------ADR-VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE-----------E 301 (399)
Q Consensus 249 ---------------~~~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~-----------~ 301 (399)
..| |.|||+++ .+.++..++++.+++.|+|.|.++........ .
T Consensus 253 ~~~~~~~~~~~~~~~~~P~V~VKi~pd---------~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlS 323 (415)
T 3i65_A 253 NNIMNDEFLWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 323 (415)
T ss_dssp HCCSCHHHHCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred cccccccccccccCCCCCeEEEEecCC---------CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcC
Confidence 237 89999983 23456788999999999999999865432110 1
Q ss_pred cCCC----chhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC-CcHHHHHHhCC
Q 015862 302 KSEC----PHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN-PDLPRRFELNA 363 (399)
Q Consensus 302 ~~~~----~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad-Pdl~~k~~~g~ 363 (399)
..+. ++.++.+++++ ++|||++||| |.++|.++|+.| ||+|++||+++.+ |+|+.++.++.
T Consensus 324 G~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG-Ad~VqIgra~l~~GP~~~~~i~~~L 392 (415)
T 3i65_A 324 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLVFNGMKSAVQIKREL 392 (415)
T ss_dssp EGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT-EEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHhcCHHHHHHHHHHH
Confidence 1111 25678889998 6999999999 899999999998 9999999999988 99999999874
No 33
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.66 E-value=1.3e-15 Score=153.48 Aligned_cols=141 Identities=15% Similarity=0.243 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccc----cchhhhhcccCcccCCCCCCCCchh-hhhHHHHHHHHHHHHHhCCC-ceEEE
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGA----HGYLIDQFLKDQVNDRTDQYGGSLE-NRCRFALEIVEAVSNEIGAD-RVGIR 255 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~----~GyLl~qFlSp~~N~R~D~yGGsle-nR~r~~~eii~avR~~vg~~-~v~vr 255 (399)
+++|+++|++++++||++|+||.. |||+ |+||.+|+ +|||+.+ ++.++..|+|++||+++|++ +|.++
T Consensus 151 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~~~~~~~---~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vD 224 (410)
T 2gl5_A 151 PEEYAEAARAALDDGYDAIKVDPLEIDRNGDD---CVFQNRNR---NYSGLLLADQLKMGEARIAAMREAMGDDADIIVE 224 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB---TTTSSCCG---GGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccCCcccc---cccccccc---cccCccchhHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 356799999999999999999975 6887 88898876 7999986 79999999999999999987 57777
Q ss_pred ecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHH
Q 015862 256 LSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKA 334 (399)
Q Consensus 256 ls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~ 334 (399)
.+. ..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++
T Consensus 225 an~---------~~~~~~ai~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 225 IHS---------LLGTNSAIQFAKAIEKYRIFLYE--EPI------HPLNSDNMQKVSRSTTIPIATGERSYTRWGYREL 287 (410)
T ss_dssp CTT---------CSCHHHHHHHHHHHGGGCEEEEE--CSS------CSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHH
T ss_pred CCC---------CCCHHHHHHHHHHHHhcCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 653 33578899999999999999987 441 1235678889999999999999998 89999999
Q ss_pred HHcCCCcEEEe
Q 015862 335 IAEGRADLVVY 345 (399)
Q Consensus 335 L~~G~~D~V~~ 345 (399)
|+.+.+|+|.+
T Consensus 288 i~~~~~d~v~i 298 (410)
T 2gl5_A 288 LEKQSIAVAQP 298 (410)
T ss_dssp HHTTCCSEECC
T ss_pred HHcCCCCEEec
Confidence 99999999987
No 34
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.65 E-value=1.3e-15 Score=152.56 Aligned_cols=139 Identities=12% Similarity=0.140 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.+||||.++ +| |. .||||.+++.++..|+|++||+++|++ +|.++.+.
T Consensus 139 ~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~-----~~-~~-~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~--- 208 (392)
T 2poz_A 139 DEFARAVERPLKEGYGALKFYPLAQRVGSA-----LQ-HV-TRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG--- 208 (392)
T ss_dssp HHHHHHTHHHHHTTCSEEEECCCCEEETTE-----EE-CC-BTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccc-----cc-cc-ccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 567899999999999999999999999553 46 54 899999999999999999999999987 67877753
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ |+++++++|+.+.+
T Consensus 209 ------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 209 ------GLTTDETIRFCRKIGELDICFVE--EPC------DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQAC 274 (392)
T ss_dssp ------CSCHHHHHHHHHHHGGGCEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 441 1235677888999999999999999 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 275 d~v~i 279 (392)
T 2poz_A 275 GIIQP 279 (392)
T ss_dssp SEECC
T ss_pred CEEec
Confidence 99987
No 35
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.63 E-value=2.8e-15 Score=148.77 Aligned_cols=232 Identities=17% Similarity=0.130 Sum_probs=151.6
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhc-C-CCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRT-T-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a-~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
.+..-...+|.+.+++++|+.+||+.... +.|.-+ .. +++.| + |.++++++....
T Consensus 65 ~~~~d~st~i~G~~l~~Pi~iAPma~~g~--~~~~~e-~~-la~aa~~~G~~~~~s~~~s~------------------- 121 (368)
T 2nli_A 65 VEAPDTSTEILGHKIKAPFIMAPIAAHGL--AHTTKE-AG-TARAVSEFGTIMSISAYSGA------------------- 121 (368)
T ss_dssp CSCCCCCEEETTEEESSSEEECCCSCGGG--TCTTHH-HH-HHHHHHHHTCCEEECTTCSS-------------------
T ss_pred CccCCcceEECCEecCCceeecchhhccC--CCcHHH-HH-HHHHHHHcCCCEEeechHhH-------------------
Confidence 34555668889999999999999973110 122212 22 33333 3 788888874320
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFR 186 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~ 186 (399)
.+.++.+. ..+.+.++||.... + + +...
T Consensus 122 -~le~v~~~--~~~~~~~~QLy~~~----------------------d---------------~------------~~~~ 149 (368)
T 2nli_A 122 -TFEEISEG--LNGGPRWFQIYMAK----------------------D---------------D------------QQNR 149 (368)
T ss_dssp -CHHHHHHH--HTTCCEEEEECCBS----------------------S---------------H------------HHHH
T ss_pred -HHHHHHHh--CCCCCEEEEEeccC----------------------C---------------H------------HHHH
Confidence 11223221 23678899995210 0 0 1236
Q ss_pred HHHHHHHHhCCCEEEEccccch-------hhhhcccCcc--cCC----CCCCCCch-----hhhhHHHHHHHHHHHHHhC
Q 015862 187 LAARNAIEAGFDGVELHGAHGY-------LIDQFLKDQV--NDR----TDQYGGSL-----ENRCRFALEIVEAVSNEIG 248 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~Gy-------Ll~qFlSp~~--N~R----~D~yGGsl-----enR~r~~~eii~avR~~vg 248 (399)
+.+++|.++||++|.||.+|.+ +.+.|..|.+ |.+ .+..|..+ +.+.++..++|++||+.++
T Consensus 150 ~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~ 229 (368)
T 2nli_A 150 DILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSG 229 (368)
T ss_dssp HHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSS
T ss_pred HHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcC
Confidence 7778889999999999999987 6667766632 332 14456554 3466788999999999984
Q ss_pred CCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC
Q 015862 249 ADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY 326 (399)
Q Consensus 249 ~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi 326 (399)
.||.+|... + .+.++.+++.|+|+|.++...-.+.+...+.++.+..+++++ ++|||++|||
T Consensus 230 -~PvivK~v~-----------~----~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI 293 (368)
T 2nli_A 230 -LPVFVKGIQ-----------H----PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGV 293 (368)
T ss_dssp -SCEEEEEEC-----------S----HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSC
T ss_pred -CCEEEEcCC-----------C----HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCC
Confidence 388888432 1 234677889999999996432112223344557788898888 6999999999
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 327 -DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 327 -t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
+.+++.++|..| ||+|++||+++..
T Consensus 294 ~~g~D~~kalalG-Ad~V~iGr~~l~~ 319 (368)
T 2nli_A 294 RRGEHVAKALASG-ADVVALGRPVLFG 319 (368)
T ss_dssp CSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred CCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 999999999998 9999999998864
No 36
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.58 E-value=6.5e-14 Score=144.38 Aligned_cols=235 Identities=13% Similarity=0.044 Sum_probs=154.5
Q ss_pred ccCCCccccCCeeeCCceeeCCCCCCCCCCCCC--CHHHHHHHHhh--cCCCcEEEEcccccCCCCCCCCCCCCCCCHHH
Q 015862 30 ILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVP--QPHAILYYSQR--TTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQ 105 (399)
Q Consensus 30 ~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~--t~~~~~~y~~~--a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~ 105 (399)
+..-...+|.+.+++++|+++||+...- +.| .+..++.-.+. + |.++++++.... +
T Consensus 175 ~~~d~st~i~G~~l~~Pi~iAPma~~~l--~~~~~~e~alaraA~~~~~-G~~~~~s~~a~~--------------s--- 234 (511)
T 1kbi_A 175 RKVDISTDMLGSHVDVPFYVSATALCKL--GNPLEGEKDVARGCGQGVT-KVPQMISTLASC--------------S--- 234 (511)
T ss_dssp SSCBCCEEETTEEESSSEEECCCSCGGG--TCTTTTHHHHHHHHHSSSS-CCCEEECTTCSS--------------C---
T ss_pred ccccCccccCCccCCCCeEeccchhccc--cChhhHHHHHHHHHHHhCC-CeeEEeCCcccC--------------C---
Confidence 3344568889999999999999975211 122 35555555555 3 567777654211 1
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDF 185 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f 185 (399)
+..+.+.....+...++||.... + + +..
T Consensus 235 ---~e~v~~~~~~~~~~~~~QLy~~~----------------------d---------------~------------~~~ 262 (511)
T 1kbi_A 235 ---PEEIIEAAPSDKQIQWYQLYVNS----------------------D---------------R------------KIT 262 (511)
T ss_dssp ---HHHHHHTCCCSSCCEEEEECCCS----------------------S---------------H------------HHH
T ss_pred ---HHHHHhhcCCCCCCeEEEEeecC----------------------C---------------H------------HHH
Confidence 11111110012467788885100 0 0 113
Q ss_pred HHHHHHHHHhCCCEEEEccccch-------hhhhcccCcccCC------CCCCCCc--h---hhhhHHHHHHHHHHHHHh
Q 015862 186 RLAARNAIEAGFDGVELHGAHGY-------LIDQFLKDQVNDR------TDQYGGS--L---ENRCRFALEIVEAVSNEI 247 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~Gy-------Ll~qFlSp~~N~R------~D~yGGs--l---enR~r~~~eii~avR~~v 247 (399)
.+++++|.++|||+|.||..+.. +-.+|.+|..+.+ .|.++|. + ..+.++..++|++||+.+
T Consensus 263 ~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~ 342 (511)
T 1kbi_A 263 DDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKT 342 (511)
T ss_dssp HHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHHh
Confidence 56778899999999999998755 7788888865444 3555553 1 145677789999999998
Q ss_pred CCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-------CCcE
Q 015862 248 GADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-------KGTF 320 (399)
Q Consensus 248 g~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-------~~pv 320 (399)
+ -||.+|... +. +.++.++++|+|+|.++...-.+.+...+.++.+..+++++ ++||
T Consensus 343 ~-~PvivKgv~-----------~~----e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipV 406 (511)
T 1kbi_A 343 K-LPIVIKGVQ-----------RT----EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEV 406 (511)
T ss_dssp S-SCEEEEEEC-----------SH----HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEE
T ss_pred C-CcEEEEeCC-----------CH----HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEE
Confidence 4 389998532 12 34677889999999995432112222333456677787777 6999
Q ss_pred EEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 321 LVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 321 i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
|++||| +.+++.++|..| ||+|++||+++...
T Consensus 407 ia~GGI~~g~Dv~kaLalG-AdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 407 FVDGGVRRGTDVLKALCLG-AKGVGLGRPFLYAN 439 (511)
T ss_dssp EEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcC-CCEEEECHHHHHHH
Confidence 999999 999999999998 99999999999755
No 37
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=99.54 E-value=8.4e-14 Score=140.00 Aligned_cols=137 Identities=14% Similarity=0.235 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccc----cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEe
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGA----HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRL 256 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~----~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrl 256 (399)
.++|+++|++++++||++|+||.. +||+ |+||..| +| .+++.++..|+|++||+++|++ .|.++.
T Consensus 153 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~~--~~-----~~~~~~~~~e~v~avR~a~G~d~~l~vDa 222 (407)
T 2o56_A 153 PEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW---NQQNLNG--PL-----TDKILRLGYDRMAAIRDAVGPDVDIIAEM 222 (407)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB---SCSCCCS--SC-----CHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccCCcCcc---ccCcccC--CC-----chhHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 356799999999999999999985 4886 9998877 33 2789999999999999999987 688877
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
+. ..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ +++++++++
T Consensus 223 n~---------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 285 (407)
T 2o56_A 223 HA---------FTDTTSAIQFGRMIEELGIFYYE--EPV------MPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFL 285 (407)
T ss_dssp TT---------CSCHHHHHHHHHHHGGGCCSCEE--CSS------CSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHH
T ss_pred CC---------CCCHHHHHHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHH
Confidence 53 33578899999999999999987 431 1235678889999999999999999 899999999
Q ss_pred HcCCCcEEEe
Q 015862 336 AEGRADLVVY 345 (399)
Q Consensus 336 ~~G~~D~V~~ 345 (399)
+++.+|+|.+
T Consensus 286 ~~~~~d~v~i 295 (407)
T 2o56_A 286 ENGSLSVIQP 295 (407)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 9999999987
No 38
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.52 E-value=1.9e-13 Score=137.23 Aligned_cols=139 Identities=15% Similarity=0.159 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccc----cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEec
Q 015862 183 NDFRLAARNAIEAGFDGVELHGA----HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLS 257 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~----~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls 257 (399)
++|+++|++++++||++|+||.. |||+ |+||..|. | .+++.++..|+|++||+++|++ +|.++.+
T Consensus 148 e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~g~--~-----~~~~~~~~~e~v~avr~avG~d~~l~vDan 217 (403)
T 2ox4_A 148 EEYAEEALKAVAEGYDAVKVDVLAHDRNGSR---EGVFLEGP--L-----PSETIKIGVERVEAIRNAVGPDVDIIVENH 217 (403)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSSCTTSCC---TTCCCSSS--C-----CHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccCCcccc---ccCcccCC--C-----chHHHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 56789999999999999999975 6875 99988762 2 3889999999999999999987 5777765
Q ss_pred CCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHH
Q 015862 258 PFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
. ..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ |+++++++|+
T Consensus 218 ~---------~~~~~~ai~~~~~l~~~~i~~iE--~P~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 280 (403)
T 2ox4_A 218 G---------HTDLVSAIQFAKAIEEFNIFFYE--EIN------TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLE 280 (403)
T ss_dssp T---------CSCHHHHHHHHHHHGGGCEEEEE--CCS------CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHH
T ss_pred C---------CCCHHHHHHHHHHHHhhCCCEEe--CCC------ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHH
Confidence 3 33578899999999999999987 441 1235678889999999999999999 8999999999
Q ss_pred cCCCcEEEechH
Q 015862 337 EGRADLVVYGRL 348 (399)
Q Consensus 337 ~G~~D~V~~gR~ 348 (399)
.+.+|+|.+--.
T Consensus 281 ~~~~d~v~ik~~ 292 (403)
T 2ox4_A 281 DRSIDVIQPDLG 292 (403)
T ss_dssp TTCCSEECCCHH
T ss_pred cCCCCEEecCcc
Confidence 999999987443
No 39
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.49 E-value=1.6e-12 Score=127.25 Aligned_cols=132 Identities=17% Similarity=0.106 Sum_probs=102.1
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
|.+.+.++.++|+|+|++|+++ | .++++++|+. | -+|.+++..
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~---------p--------------------~~~i~~l~~~-g-~~v~~~v~~------ 119 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGN---------P--------------------SKYMERFHEA-G-IIVIPVVPS------ 119 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC---------G--------------------GGTHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHHCCCCEEEECCCC---------h--------------------HHHHHHHHHc-C-CeEEEEeCC------
Confidence 5778889999999999999876 2 3467788874 3 367777742
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
. +.++.+++.|+|+|.++.............+..++.+++.+++||+++||| |++++.++|+.| +|+|
T Consensus 120 ------~----~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~G-AdgV 188 (332)
T 2z6i_A 120 ------V----ALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLG-AEAV 188 (332)
T ss_dssp ------H----HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT-CSEE
T ss_pred ------H----HHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEE
Confidence 2 245667889999999865321111112234567888999999999999999 799999999998 9999
Q ss_pred EechHHhhCCcHH------HHHHhCCC
Q 015862 344 VYGRLFLANPDLP------RRFELNAP 364 (399)
Q Consensus 344 ~~gR~~iadPdl~------~k~~~g~~ 364 (399)
.+||+++++|++. +++.++..
T Consensus 189 ~vGs~~l~~~e~~~~~~~k~~~~~~~~ 215 (332)
T 2z6i_A 189 QVGTRFVVAKESNAHPNYKEKILKARD 215 (332)
T ss_dssp EECHHHHTBTTCCSCHHHHHHHHHCCT
T ss_pred EecHHHhcCccccccHHHHHHHHhCCC
Confidence 9999999999987 88888765
No 40
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.46 E-value=8.2e-13 Score=132.92 Aligned_cols=135 Identities=22% Similarity=0.326 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccc--cchhhhhcccCcccCCCCCCCCchh--hhhHHHHHHHHHHHHHhCCC-ceEEEe
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGA--HGYLIDQFLKDQVNDRTDQYGGSLE--NRCRFALEIVEAVSNEIGAD-RVGIRL 256 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~--~GyLl~qFlSp~~N~R~D~yGGsle--nR~r~~~eii~avR~~vg~~-~v~vrl 256 (399)
.++|+++|++++++||++|+||.+ +|++.. | |||+++ ++.++..|+|++||+++|++ .|.++.
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~----~--------~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDa 217 (410)
T 2qq6_A 150 NEEYIAVAREAVERGFDAIKLDVDDITGPLHR----D--------FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDM 217 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS----C--------SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccCCcccC----C--------cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 478899999999999999999984 566532 1 888887 79999999999999999987 577766
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
+. ..+.++++++++.|++++++|++ +|. ....++..+.+++.+++||++.+.+ +++++++++
T Consensus 218 n~---------~~~~~~a~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 280 (410)
T 2qq6_A 218 HG---------RFDIPSSIRFARAMEPFGLLWLE--EPT------PPENLDALAEVRRSTSTPICAGENVYTRFDFRELF 280 (410)
T ss_dssp TT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHH
T ss_pred CC---------CCCHHHHHHHHHHHhhcCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHH
Confidence 53 33578899999999999999988 442 1235677888999999999999998 899999999
Q ss_pred HcCCCcEEEe
Q 015862 336 AEGRADLVVY 345 (399)
Q Consensus 336 ~~G~~D~V~~ 345 (399)
+.+.+|+|.+
T Consensus 281 ~~~~~d~v~i 290 (410)
T 2qq6_A 281 AKRAVDYVMP 290 (410)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 9999999987
No 41
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.46 E-value=4.3e-12 Score=124.98 Aligned_cols=132 Identities=22% Similarity=0.252 Sum_probs=90.9
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHH--HHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRF--ALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~--~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
+.++|+|+|+||.+| .+++++|..+ ..| +.++|++||+.++ -||.+|+..+ ..
T Consensus 136 ~~~~gad~i~i~~~~---~~~~~~~~~~-------------~~~~~~~~~i~~vr~~~~-~Pv~vK~~~~--------~~ 190 (349)
T 1p0k_A 136 VEMIGANALQIHLNV---IQEIVMPEGD-------------RSFSGALKRIEQICSRVS-VPVIVKEVGF--------GM 190 (349)
T ss_dssp HHHTTCSEEEEEECT---TTTC---------------------CTTHHHHHHHHHHHCS-SCEEEEEESS--------CC
T ss_pred HHhcCCCeEEecccc---hhhhcCCCCC-------------cchHHHHHHHHHHHHHcC-CCEEEEecCC--------CC
Confidence 445899999999988 3456655321 122 6899999999874 4899998532 11
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeC--CC-c------cc-------ccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHH
Q 015862 270 PEALGLYMAESLNKYGILYCHMVE--PR-M------KT-------REEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDG 331 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~--~~-~------~~-------~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a 331 (399)
+. +.++.+.++|+|+|.++. ++ . .. .....+.+..+..+++.+ ++|||++||| |++++
T Consensus 191 ~~----~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~ 266 (349)
T 1p0k_A 191 SK----ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDV 266 (349)
T ss_dssp CH----HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHH
T ss_pred CH----HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHH
Confidence 22 356788899999999853 21 0 00 011122334567777877 7999999999 89999
Q ss_pred HHHHHcCCCcEEEechHHhhCC
Q 015862 332 NKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 332 ~~~L~~G~~D~V~~gR~~iadP 353 (399)
.++|..| ||+|++||+++..+
T Consensus 267 ~k~l~~G-Ad~V~iG~~~l~~~ 287 (349)
T 1p0k_A 267 AKAIALG-ASCTGMAGHFLKAL 287 (349)
T ss_dssp HHHHHTT-CSEEEECHHHHHHH
T ss_pred HHHHHcC-CCEEEEcHHHHHHH
Confidence 9999998 99999999999863
No 42
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.44 E-value=1.4e-12 Score=129.88 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
.++|+++|++++++||++|+||.+|+| +++++ +.++..|+|++||+++|++ +|.++.+.
T Consensus 150 ~e~~~~~a~~~~~~Gf~~iKik~g~~~-----------------~~~~~-~~~~~~e~v~avr~a~g~d~~l~vDan~-- 209 (382)
T 1rvk_A 150 PEDYGRFAETLVKRGYKGIKLHTWMPP-----------------VSWAP-DVKMDLKACAAVREAVGPDIRLMIDAFH-- 209 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCTT-----------------STTCC-CHHHHHHHHHHHHHHHCTTSEEEEECCT--
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcCc-----------------ccccc-chHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 466899999999999999999999975 12455 7899999999999999987 67877764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-C-HHHHHHHHHcC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-D-REDGNKAIAEG 338 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t-~~~a~~~L~~G 338 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ | +++++++|+.+
T Consensus 210 -------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~ 274 (382)
T 1rvk_A 210 -------WYSRTDALALGRGLEKLGFDWIE--EPM------DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAG 274 (382)
T ss_dssp -------TCCHHHHHHHHHHHHTTTCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTT
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcC
Confidence 23578899999999999999987 441 1235677888999999999999998 9 99999999999
Q ss_pred CCcEEEechHHhhCC
Q 015862 339 RADLVVYGRLFLANP 353 (399)
Q Consensus 339 ~~D~V~~gR~~iadP 353 (399)
.+|+|.+--..+.-.
T Consensus 275 ~~d~v~ik~~~~GGi 289 (382)
T 1rvk_A 275 ACDILRTGVNDVGGI 289 (382)
T ss_dssp CCSEEEECHHHHTSH
T ss_pred CCCEEeeCchhcCCH
Confidence 999999866655444
No 43
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.39 E-value=9.5e-12 Score=122.81 Aligned_cols=146 Identities=16% Similarity=0.119 Sum_probs=92.9
Q ss_pred HHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHH
Q 015862 193 IEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEA 272 (399)
Q Consensus 193 ~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~ 272 (399)
...++|.||||.+| | |.. -+.++......+.++++++++++. .++.+|++++- +..
T Consensus 152 ~~~~ad~ielNiSc---------P--n~~---g~~~l~~~~~~~~~i~~~v~~~~~-~pv~vK~~p~~---------~~~ 207 (354)
T 3tjx_A 152 ATEKGVILELNLSC---------P--NVP---GKPQVAYDFDAMRQCLTAVSEVYP-HSFGVKMPPYF---------DFA 207 (354)
T ss_dssp HHHHCCEEEEECC-----------------------CTTSHHHHHHHHHHHHHHCC-SCEEEEECCCC---------SHH
T ss_pred hhcCCCEEEeeeCC---------C--CCc---chhhhccCHHHHHHHHHHHHHHhh-cccccccCCCC---------Cch
Confidence 34589999999988 4 332 133555566788999999999984 38999999831 122
Q ss_pred HHHHHHHhhhhh-CceEEEEeCCC----------ccc---c------cccCCCc----hhhHHHHhhc-CCcEEEeCCC-
Q 015862 273 LGLYMAESLNKY-GILYCHMVEPR----------MKT---R------EEKSECP----HSLLPMRKAF-KGTFLVAGGY- 326 (399)
Q Consensus 273 ~~~~l~~~Le~~-Gvd~l~v~~~~----------~~~---~------~~~~~~~----~~~~~ir~~~-~~pvi~~Ggi- 326 (399)
.....+..+.+. +++.+...... ... . ....+.+ ..+..+++.+ ++|||++|||
T Consensus 208 ~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~ 287 (354)
T 3tjx_A 208 AFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY 287 (354)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred hHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcC
Confidence 223344444433 34444332110 000 0 0111222 2344555655 5899999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHh-hCCcHHHHHHhCC
Q 015862 327 DREDGNKAIAEGRADLVVYGRLFL-ANPDLPRRFELNA 363 (399)
Q Consensus 327 t~~~a~~~L~~G~~D~V~~gR~~i-adPdl~~k~~~g~ 363 (399)
|.+||.+.|..| ||+|+++++++ .+|+++.++.++.
T Consensus 288 s~~Da~e~i~aG-As~Vqv~Ta~~y~GP~~~~~I~~~L 324 (354)
T 3tjx_A 288 TGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp SHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred CHHHHHHHHHcC-CCEEEEChhhhhcCchHHHHHHHHH
Confidence 999999999998 99999999975 7899999998864
No 44
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.39 E-value=6.2e-12 Score=125.40 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++|+++|++++++|||+|+||.|+ +.++..|+|++||+++| + +|.+..+.
T Consensus 148 ~e~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g-d~~l~vD~n~-- 199 (384)
T 2pgw_A 148 AEELARDAAVGHAQGERVFYLKVGR-------------------------GEKLDLEITAAVRGEIG-DARLRLDANE-- 199 (384)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHHTTST-TCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCC-------------------------CHHHHHHHHHHHHHHcC-CcEEEEecCC--
Confidence 3568999999999999999999762 57889999999999999 6 56655432
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ...+++..+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 200 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~ 264 (384)
T 2pgw_A 200 -------GWSVHDAINMCRKLEKYDIEFIE--QPT------VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRA 264 (384)
T ss_dssp -------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 33577899999999999999988 441 2345678889999999999999999 8999999999999
Q ss_pred CcEEEechHHhhCCcHHHHH
Q 015862 340 ADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 340 ~D~V~~gR~~iadPdl~~k~ 359 (399)
+|+|.+-...+..+.-..++
T Consensus 265 ~d~v~ik~~~~GGit~~~~i 284 (384)
T 2pgw_A 265 ADMICIGPREIGGIQPMMKA 284 (384)
T ss_dssp CSEEEECHHHHTSHHHHHHH
T ss_pred CCEEEEcchhhCCHHHHHHH
Confidence 99999999988887544443
No 45
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.37 E-value=7.2e-12 Score=125.11 Aligned_cols=233 Identities=14% Similarity=0.065 Sum_probs=143.4
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhc-C-CCcEEEEcccccCCCCCCCCCCCCCCCHHHH
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRT-T-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQV 106 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a-~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i 106 (399)
.+..-...+|.+.+++++|+.+||... . -..|.-+ .. +++-| + |.++++++....
T Consensus 79 ~~~~d~st~i~G~~l~~Pi~iAPmg~~-~-l~~~~~e-~~-laraA~~~G~~~~~s~~~s~------------------- 135 (392)
T 2nzl_A 79 VAETDLSTSVLGQRVSMPICVGATAMQ-R-MAHVDGE-LA-TVRACQSLGTGMMLSSWATS------------------- 135 (392)
T ss_dssp CTTCBCCEEETTEEESSSEEECCCSCG-G-GTSTTHH-HH-HHHHHHHHTCEEEECTTCSS-------------------
T ss_pred CcCCCcceEECCEecCCceEecccccc-c-cccchHH-HH-HHHHHHHcCCCeeccchHHH-------------------
Confidence 344556678899999999999999321 1 0112221 22 33333 3 788888774311
Q ss_pred hhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHH
Q 015862 107 EAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFR 186 (399)
Q Consensus 107 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~ 186 (399)
.+.++.+ +..+...++||.-.. + + +...
T Consensus 136 -~le~v~~--~~~~~~~~~QLy~~~----------------------d---------------~------------~~~~ 163 (392)
T 2nzl_A 136 -SIEEVAE--AGPEALRWLQLYIYK----------------------D---------------R------------EVTK 163 (392)
T ss_dssp -CHHHHHH--HCTTSEEEEEECCBS----------------------S---------------H------------HHHH
T ss_pred -HHHHHHH--hcCCCcEEEEEEecC----------------------C---------------H------------HHHH
Confidence 1112222 113578899995210 0 0 1135
Q ss_pred HHHHHHHHhCCCEEEEccccchh-------hhhcccC-cc---cCC------CC--C-CCCc----hhh---hhHHHHHH
Q 015862 187 LAARNAIEAGFDGVELHGAHGYL-------IDQFLKD-QV---NDR------TD--Q-YGGS----LEN---RCRFALEI 239 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyL-------l~qFlSp-~~---N~R------~D--~-yGGs----len---R~r~~~ei 239 (399)
+.+++|.++||+++.|+.++..+ .+.|-.| .. |.- .. . .+|+ +.. ..++..+.
T Consensus 164 ~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~ 243 (392)
T 2nzl_A 164 KLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWED 243 (392)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHH
Confidence 66778888999999999888542 1222111 11 210 00 0 1222 222 44567889
Q ss_pred HHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--C
Q 015862 240 VEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--K 317 (399)
Q Consensus 240 i~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~ 317 (399)
|++||+.++ -||.+|... +. +.++.++++|+|+|.++...-.+.+...+.++.+..+++++ +
T Consensus 244 i~~lr~~~~-~PvivKgv~-----------~~----e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ 307 (392)
T 2nzl_A 244 IKWLRRLTS-LPIVAKGIL-----------RG----DDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGK 307 (392)
T ss_dssp HHHHC--CC-SCEEEEEEC-----------CH----HHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhC-CCEEEEecC-----------CH----HHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCC
Confidence 999999884 488888532 12 34677889999999996432112223344556778888888 4
Q ss_pred CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 318 GTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 318 ~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
+|||++||| +.+++.++|..| ||+|++||+++...
T Consensus 308 ipVia~GGI~~g~Dv~kalalG-Ad~V~iGr~~l~~~ 343 (392)
T 2nzl_A 308 VEVFLDGGVRKGTDVLKALALG-AKAVFVGRPIVWGL 343 (392)
T ss_dssp SEEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhC-CCeeEECHHHHHHH
Confidence 999999999 999999999998 99999999998753
No 46
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.36 E-value=1.2e-11 Score=122.78 Aligned_cols=150 Identities=18% Similarity=0.080 Sum_probs=100.3
Q ss_pred HHHHHHHHHhCCCEEEEccccchh-------hhhcccCc----ccCCCC-------CCCCch------hhhhHHHHHHHH
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYL-------IDQFLKDQ----VNDRTD-------QYGGSL------ENRCRFALEIVE 241 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyL-------l~qFlSp~----~N~R~D-------~yGGsl------enR~r~~~eii~ 241 (399)
.+.++++.++||++|+|+..+... -..|--|. -|...+ .-|..+ +...++..+.|+
T Consensus 139 ~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~ 218 (370)
T 1gox_A 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVA 218 (370)
T ss_dssp HHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHH
Confidence 556677888999999999998543 12221111 011111 112222 122345678899
Q ss_pred HHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCc
Q 015862 242 AVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGT 319 (399)
Q Consensus 242 avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~p 319 (399)
+||+.++ -||.+|... +. +.++.+.++|+|+|.++...-.+.....+.++.+..+++.+ ++|
T Consensus 219 ~l~~~~~-~pv~vK~~~-----------~~----e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ip 282 (370)
T 1gox_A 219 WLQTITS-LPILVKGVI-----------TA----EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIP 282 (370)
T ss_dssp HHHHHCC-SCEEEECCC-----------SH----HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSC
T ss_pred HHHHHhC-CCEEEEecC-----------CH----HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCE
Confidence 9999984 378888763 12 34677888999999995321111122234456778888888 699
Q ss_pred EEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 320 FLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 320 vi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
||++||+ +.+++.++|+.| ||+|++||+++..
T Consensus 283 via~GGI~~~~D~~k~l~~G-AdaV~iGr~~l~~ 315 (370)
T 1gox_A 283 VFLDGGVRRGTDVFKALALG-AAGVFIGRPVVFS 315 (370)
T ss_dssp EEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHcC-CCEEeecHHHHHH
Confidence 9999999 899999999998 9999999999864
No 47
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.36 E-value=6.9e-12 Score=125.49 Aligned_cols=126 Identities=13% Similarity=0.211 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++|+++|++++++|||+|+||.+++ +.++.+|+|++||+++|++ +|.++.+.
T Consensus 163 ~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------~~~~~~e~v~avR~avg~d~~l~vDan~-- 216 (393)
T 2og9_A 163 IDQLMVNASASIERGIGGIKLKVGQP------------------------DGALDIARVTAVRKHLGDAVPLMVDANQ-- 216 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCS------------------------CHHHHHHHHHHHHHHHCTTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC------------------------CHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 46789999999999999999997741 2688999999999999987 68887653
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 217 -------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 281 (393)
T 2og9_A 217 -------QWDRPTAQRMCRIFEPFNLVWIE--EPL------DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRA 281 (393)
T ss_dssp -------CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCC
Confidence 33578899999999999999987 431 1235677888999999999999999 8999999999999
Q ss_pred CcEEEechH
Q 015862 340 ADLVVYGRL 348 (399)
Q Consensus 340 ~D~V~~gR~ 348 (399)
+|+|.+--.
T Consensus 282 ~d~v~ik~~ 290 (393)
T 2og9_A 282 ADYLMPDAP 290 (393)
T ss_dssp CSEECCCHH
T ss_pred CCEEeeCcc
Confidence 999988443
No 48
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.34 E-value=1.2e-11 Score=122.22 Aligned_cols=130 Identities=15% Similarity=0.184 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.||+ + .++..|++++||+++|++ +|.++.+.
T Consensus 146 ~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~--- 198 (359)
T 1mdl_A 146 KLATERAVTAAELGFRAVKTRIGYP--------------------A----LDQDLAVVRSIRQAVGDDFGIMVDYNQ--- 198 (359)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECCC---
Confidence 5588999999999999999998871 2 477899999999999987 67777764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ |+++++++|+.+.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~ 264 (359)
T 1mdl_A 199 ------SLDVPAAIKRSQALQQEGVTWIE--EPT------LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGAC 264 (359)
T ss_dssp ------CSCHHHHHHHHHHHHHHTCSCEE--CCS------CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCeEE--CCC------ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 23577899999999999999987 441 1235677889999999999999999 89999999999999
Q ss_pred cEEEechHHhhCC
Q 015862 341 DLVVYGRLFLANP 353 (399)
Q Consensus 341 D~V~~gR~~iadP 353 (399)
|+|.+-...+.-.
T Consensus 265 d~v~ik~~~~GGi 277 (359)
T 1mdl_A 265 RLAMPDAMKIGGV 277 (359)
T ss_dssp SEECCBTTTTTHH
T ss_pred CEEeecchhhCCH
Confidence 9999976655444
No 49
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.33 E-value=1.1e-11 Score=123.39 Aligned_cols=127 Identities=8% Similarity=0.060 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++|||+|+||.|| + .++..|+|++||+++|++ +|.++.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~g~---------------------~----~~~~~e~v~avr~a~g~d~~l~vDan~--- 198 (379)
T 2rdx_A 147 AETRAELARHRAAGYRQFQIKVGA---------------------D----WQSDIDRIRACLPLLEPGEKAMADANQ--- 198 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHGGGSCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEeccC---------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 568999999999999999999886 1 478899999999999987 68777653
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|+++|+ |++ +| .. .++..+.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i-~iE--~P-----~~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~ 261 (379)
T 2rdx_A 199 ------GWRVDNAIRLARATRDLDY-ILE--QP-----CR---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGA 261 (379)
T ss_dssp ------CSCHHHHHHHHHHTTTSCC-EEE--CC-----SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhCCe-EEe--CC-----cC---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 3357889999999999999 886 33 11 5678889999999999999999 89999999999999
Q ss_pred cEEEechHHhhCCc
Q 015862 341 DLVVYGRLFLANPD 354 (399)
Q Consensus 341 D~V~~gR~~iadPd 354 (399)
|+|.+-...+.-..
T Consensus 262 d~v~ik~~~~GGit 275 (379)
T 2rdx_A 262 EICCLKISNLGGLS 275 (379)
T ss_dssp SEEEEETTTTTSHH
T ss_pred CEEEEeccccCCHH
Confidence 99999777666553
No 50
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.33 E-value=1.7e-11 Score=121.71 Aligned_cols=135 Identities=13% Similarity=0.121 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.||+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~G~d~~l~vDan~--- 200 (371)
T 2ovl_A 148 ADLKTQADRFLAGGFRAIKMKVGRP--------------------D----LKEDVDRVSALREHLGDSFPLMVDANM--- 200 (371)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 5578999999999999999998873 2 357799999999999987 68877764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ |+++++++|+.+.+
T Consensus 201 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 266 (371)
T 2ovl_A 201 ------KWTVDGAIRAARALAPFDLHWIE--EPT------IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL 266 (371)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 23577899999999999999987 441 1235677888999999999999999 89999999999999
Q ss_pred cEEEechHHhhCCcHHHH
Q 015862 341 DLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 341 D~V~~gR~~iadPdl~~k 358 (399)
|+|.+-...+.-+.-..+
T Consensus 267 d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 267 TLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp SEECCCTTTTTSHHHHHH
T ss_pred CEEeeCccccCCHHHHHH
Confidence 999998777666543333
No 51
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.33 E-value=1e-11 Score=124.29 Aligned_cols=131 Identities=13% Similarity=0.079 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecC
Q 015862 180 QIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSP 258 (399)
Q Consensus 180 ~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~ 258 (399)
.++++|+++|++++++||++|+||.+++|+ |+ | + .++.++.+++|++||+++|++ .|.++.+.
T Consensus 147 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~---~~--------~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~ 210 (392)
T 3p3b_A 147 AAVALMQEEAMQGYAKGQRHFKIKVGRGGR---HM--------P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANN 210 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCHHHH---TS--------C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT
T ss_pred chHHHHHHHHHHHHHhCCCEEEECcCcCcc---cC--------C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578899999999999999999999999985 54 1 3 458999999999999999987 57776653
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh-----cCCcEEEeCCC-CHHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA-----FKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggi-t~~~a~ 332 (399)
..+.++++++++.|++++++|++ +|. . ..++..+.+++. +++||++.+ + ++++++
T Consensus 211 ---------~~~~~~ai~~~~~l~~~~i~~iE--~P~-----~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~ 271 (392)
T 3p3b_A 211 ---------AYNLNLTKEVLAALSDVNLYWLE--EAF-----H--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLI 271 (392)
T ss_dssp ---------CCCHHHHHHHHHHTTTSCEEEEE--CSS-----S--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHH
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEe--cCC-----c--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHH
Confidence 33578899999999999999987 431 1 356678889998 899999999 9 899999
Q ss_pred HHHHcCCCcEEEe
Q 015862 333 KAIAEGRADLVVY 345 (399)
Q Consensus 333 ~~L~~G~~D~V~~ 345 (399)
++|+.|.+|+|.+
T Consensus 272 ~~i~~~~~d~v~i 284 (392)
T 3p3b_A 272 EWATRGRVDVLQY 284 (392)
T ss_dssp HHHHTTSCCEECC
T ss_pred HHHHcCCCCEEEe
Confidence 9999999999987
No 52
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.32 E-value=1.1e-11 Score=123.85 Aligned_cols=133 Identities=11% Similarity=0.056 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++|+++|++++++||++|+||.|+ + ..++ .|+|++||+++|++ +|.++.+.
T Consensus 165 ~e~~~~~a~~~~~~Gf~~vKik~g~-----------------------~-~~~~-~e~v~avr~a~g~d~~l~vDan~-- 217 (388)
T 2nql_A 165 LKARGELAKYWQDRGFNAFKFATPV-----------------------A-DDGP-AAEIANLRQVLGPQAKIAADMHW-- 217 (388)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEGGG-----------------------C-TTCH-HHHHHHHHHHHCTTSEEEEECCS--
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCC-----------------------C-ChHH-HHHHHHHHHHhCCCCEEEEECCC--
Confidence 4678999999999999999999764 1 2578 99999999999987 68887653
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++|++|.
T Consensus 218 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 282 (388)
T 2nql_A 218 -------NQTPERALELIAEMQPFDPWFAE--APV------WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCR 282 (388)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSC
T ss_pred -------CCCHHHHHHHHHHHhhcCCCEEE--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 23578899999999999999987 431 1235678889999999999999999 8999999999999
Q ss_pred CcEEEechHHhhCCcHHH
Q 015862 340 ADLVVYGRLFLANPDLPR 357 (399)
Q Consensus 340 ~D~V~~gR~~iadPdl~~ 357 (399)
+|+|.+-... .-+.=..
T Consensus 283 ~d~v~ik~~~-GGit~~~ 299 (388)
T 2nql_A 283 IAIVQPEMGH-KGITNFI 299 (388)
T ss_dssp CSEECCCHHH-HCHHHHH
T ss_pred CCEEEecCCC-CCHHHHH
Confidence 9999997766 6553333
No 53
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=99.32 E-value=2.7e-11 Score=121.89 Aligned_cols=134 Identities=16% Similarity=0.105 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
.++++++|++++++||++|+|+.++|.+ | || ++.+..+++|++||+++|++ +|.|+.+.
T Consensus 180 ~e~~~~~a~~~~~~Gf~~iKik~g~gp~-------------d--g~---~~~~~die~v~avReavG~d~~L~vDaN~-- 239 (412)
T 3stp_A 180 IEAMQKEAEEAMKGGYKAFKSRFGYGPK-------------D--GM---PGMRENLKRVEAVREVIGYDNDLMLECYM-- 239 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECCCCGG-------------G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccCcc-------------c--cc---chHHHHHHHHHHHHHHcCCCCeEEEECCC--
Confidence 4678999999999999999999999732 1 32 67899999999999999988 68888764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+...+..+.|++.+++||++.+.+ ++++++++++.+.
T Consensus 240 -------~~~~~~Ai~~~~~Le~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a 304 (412)
T 3stp_A 240 -------GWNLDYAKRMLPKLAPYEPRWLE--EPV------IADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKA 304 (412)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 442 1225667888999999999999998 8999999999999
Q ss_pred CcEEEechHHh
Q 015862 340 ADLVVYGRLFL 350 (399)
Q Consensus 340 ~D~V~~gR~~i 350 (399)
+|+|.+--..+
T Consensus 305 ~D~v~ik~~~~ 315 (412)
T 3stp_A 305 VSVLQYDTNRV 315 (412)
T ss_dssp CSEECCCHHHH
T ss_pred CCEEecChhhc
Confidence 99998755444
No 54
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.30 E-value=3.2e-11 Score=120.55 Aligned_cols=131 Identities=13% Similarity=0.160 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
.++|+++|++++++||++|+||.++. + .++..|+|++||+++|++ +|.|+.+.
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~g~~--------------------~----~~~~~e~v~avR~a~G~d~~l~vDan~-- 203 (391)
T 2qgy_A 150 TNDYLRQIEKFYGKKYGGIKIYPMLD--------------------S----LSISIQFVEKVREIVGDELPLMLDLAV-- 203 (391)
T ss_dssp HHHHHHHHHHHHHTTCSCEEECCCCS--------------------S----HHHHHHHHHHHHHHHCSSSCEEEECCC--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCC--------------------h----HHHHHHHHHHHHHHhCCCCEEEEEcCC--
Confidence 36789999999999999999997730 1 478899999999999987 68887764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++++++.
T Consensus 204 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 268 (391)
T 2qgy_A 204 -------PEDLDQTKSFLKEVSSFNPYWIE--EPV------DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNA 268 (391)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CSS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCeEe--CCC------ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999987 431 1235677888999999999999999 8999999999999
Q ss_pred CcEEEechHHhhCC
Q 015862 340 ADLVVYGRLFLANP 353 (399)
Q Consensus 340 ~D~V~~gR~~iadP 353 (399)
+|+|.+-...+.-.
T Consensus 269 ~d~v~ik~~~~GGi 282 (391)
T 2qgy_A 269 ADIFNPDISGMGGL 282 (391)
T ss_dssp CSEECCBTTTSSCH
T ss_pred CCEEEECcchhCCH
Confidence 99999855544433
No 55
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.28 E-value=4.1e-10 Score=111.63 Aligned_cols=125 Identities=16% Similarity=0.124 Sum_probs=91.2
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.++|+|.|.+|.++ | ..++++++|+. | -+|++++..
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~---------~-------------------~~~~i~~~~~~-g-~~v~~~v~t------- 154 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGV---------P-------------------DREVIARLRRA-G-TLTLVTATT------- 154 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSC---------C-------------------CHHHHHHHHHT-T-CEEEEEESS-------
T ss_pred HHHHHHHHhcCCCEEEEeCCC---------C-------------------cHHHHHHHHHC-C-CeEEEECCC-------
Confidence 445566778999999999765 1 04677777774 2 256766532
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc---cc---cc-----CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT---RE---EK-----SECPHSLLPMRKAFKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~---~~---~~-----~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~ 333 (399)
.+ .++.+++.|+|+|.++.+..+. .. .. ...+..++.+++.+++||++.||| |++++.+
T Consensus 155 -----~~----~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~ 225 (369)
T 3bw2_A 155 -----PE----EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAA 225 (369)
T ss_dssp -----HH----HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHH
T ss_pred -----HH----HHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHH
Confidence 22 3556778999999986543210 00 00 112566788888899999999999 9999999
Q ss_pred HHHcCCCcEEEechHHhhCCcHHH
Q 015862 334 AIAEGRADLVVYGRLFLANPDLPR 357 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl~~ 357 (399)
+|+.| +|+|.+||+++++|+++.
T Consensus 226 ~l~~G-Ad~V~vGs~~~~~~e~~~ 248 (369)
T 3bw2_A 226 VLAAG-ADAAQLGTAFLATDESGA 248 (369)
T ss_dssp HHHTT-CSEEEESHHHHTSTTCCC
T ss_pred HHHcC-CCEEEEChHHhCCcccCc
Confidence 99998 999999999999999854
No 56
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.28 E-value=4e-11 Score=120.18 Aligned_cols=125 Identities=12% Similarity=0.207 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++|+++|++++++||++|+||.|+ ++.++..|+|++||+++|++ +|.++.+.
T Consensus 176 ~e~~~~~a~~~~~~Gf~~vKik~g~------------------------~~~~~d~e~v~avR~avG~d~~l~vDan~-- 229 (398)
T 2pp0_A 176 LDQVLKNVVISRENGIGGIKLKVGQ------------------------PNCAEDIRRLTAVREALGDEFPLMVDANQ-- 229 (398)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCC------------------------SCHHHHHHHHHHHHHHHCSSSCEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCeEEEecCC------------------------CCHHHHHHHHHHHHHHcCCCCeEEEECCC--
Confidence 3567899999999999999999764 23688899999999999987 68777653
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 230 -------~~~~~~ai~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 294 (398)
T 2pp0_A 230 -------QWDRETAIRMGRKMEQFNLIWIE--EPL------DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNA 294 (398)
T ss_dssp -------CSCHHHHHHHHHHHGGGTCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHHcCCceee--CCC------ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999987 441 1235677888999999999999998 8999999999999
Q ss_pred CcEEEech
Q 015862 340 ADLVVYGR 347 (399)
Q Consensus 340 ~D~V~~gR 347 (399)
+|+|.+--
T Consensus 295 ~d~v~ik~ 302 (398)
T 2pp0_A 295 SDFVQPDA 302 (398)
T ss_dssp CSEECCCH
T ss_pred CCEEEeCc
Confidence 99998743
No 57
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.27 E-value=7.1e-11 Score=118.43 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||+ ||. |++++ ++..|+|++||+++|++ +|.++.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~----------spv--------G~~~~---~~~~e~v~avr~a~G~d~~l~vDan~--- 202 (401)
T 2hzg_A 147 QETLERARAARRDGFAAVKFGW----------GPI--------GRGTV---AADADQIMAAREGLGPDGDLMVDVGQ--- 202 (401)
T ss_dssp HHHHHHHHHHHHTTCSEEEEES----------TTT--------TSSCH---HHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEcC----------CCC--------CCCHH---HHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 5679999999999999999995 332 55553 77899999999999987 67877753
Q ss_pred cCCCCCCC--hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHh-hcCCcEEEeCCC-CHHHHHHHHHc
Q 015862 262 YMESGDSN--PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRK-AFKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 262 ~~~~~~~~--~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~-~~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
.. +.++++++++.|+++|++|++ +|. ....++..+.+++ .+++||++.+.+ |+++++++++.
T Consensus 203 ------~~~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~ 268 (401)
T 2hzg_A 203 ------IFGEDVEAAAARLPTLDAAGVLWLE--EPF------DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDY 268 (401)
T ss_dssp ------TTTTCHHHHHTTHHHHHHTTCSEEE--CCS------CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHHHhcCCCEEE--CCC------CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHC
Confidence 33 567899999999999999987 441 1235677888999 899999999999 89999999999
Q ss_pred CCCcEEEechHHhhCCc
Q 015862 338 GRADLVVYGRLFLANPD 354 (399)
Q Consensus 338 G~~D~V~~gR~~iadPd 354 (399)
+.+|+|.+-...+.-+.
T Consensus 269 ~~~d~v~ik~~~~GGit 285 (401)
T 2hzg_A 269 GRIGFIQIDCGRIGGLG 285 (401)
T ss_dssp SCCSEEEECHHHHTSHH
T ss_pred CCCCEEEeCcchhCCHH
Confidence 99999999777666553
No 58
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.26 E-value=5.9e-10 Score=109.21 Aligned_cols=125 Identities=17% Similarity=0.139 Sum_probs=90.4
Q ss_pred HHHHHHHHhC--CCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 187 LAARNAIEAG--FDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 187 ~aA~~a~~aG--fDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.|+.+.++| +|.|+|+.++| ......++|++||+.++..+|..- +.
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G------------------------~~~~~~~~i~~lr~~~~~~~vi~G-~v------ 157 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG------------------------HSNAVINMIQHIKKHLPESFVIAG-NV------ 157 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC------------------------CSHHHHHHHHHHHHHCTTSEEEEE-EE------
T ss_pred HHHHHHHhcCCCCCEEEEECCCC------------------------CcHHHHHHHHHHHHhCCCCEEEEC-Cc------
Confidence 4477788899 99999987542 124678999999999853233321 11
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeC--CCcc-c---ccccCC--CchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVE--PRMK-T---REEKSE--CPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~--~~~~-~---~~~~~~--~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
.+ .+.++.++++|+|+|.++. ++.. . .....+ .+..+.++++++++|||+.||+ ++.++.++|
T Consensus 158 ----~s----~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kal 229 (336)
T 1ypf_A 158 ----GT----PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSI 229 (336)
T ss_dssp ----CS----HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHH
T ss_pred ----CC----HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH
Confidence 11 2467788899999999843 2210 0 011112 3456778888889999999999 899999999
Q ss_pred HcCCCcEEEechHHhh
Q 015862 336 AEGRADLVVYGRLFLA 351 (399)
Q Consensus 336 ~~G~~D~V~~gR~~ia 351 (399)
..| ||+|++||+++.
T Consensus 230 alG-AdaV~iGr~~l~ 244 (336)
T 1ypf_A 230 RFG-ATMVMIGSLFAG 244 (336)
T ss_dssp HTT-CSEEEESGGGTT
T ss_pred HcC-CCEEEeChhhhc
Confidence 998 999999999995
No 59
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.25 E-value=3.7e-11 Score=111.27 Aligned_cols=126 Identities=15% Similarity=0.138 Sum_probs=95.6
Q ss_pred HHHHHHHHhCCCEEE--EccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe---cCCcc
Q 015862 187 LAARNAIEAGFDGVE--LHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL---SPFAN 261 (399)
Q Consensus 187 ~aA~~a~~aGfDgVe--Ih~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl---s~~~~ 261 (399)
..+++|.++|+|+|+ ||.+| .|.+.| ..+.+.+++||++++ ++.+|+ ++
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~-------------~~~~~~--------~~~~~~i~~v~~a~~--pv~vKvi~e~~--- 127 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA-------------FKSEKY--------DFVVEELKEIFRETP--SAVHKVIVETP--- 127 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH-------------HHTTCH--------HHHHHHHHHHHHTCT--TSEEEEECCGG---
T ss_pred HHHHHHHHcCCCEEEEEecHHH-------------HhcCCh--------HHHHHHHHHHHHHhc--CceEEEEEeCC---
Confidence 345888999999999 45444 333333 345677999999997 677888 43
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++..++++.++++|+|+|.++.+. +.....++.++.+++.+ ++||+++||+ |++++.++|+.|
T Consensus 128 ------~l~~~~~~~~a~~a~eaGad~I~tstg~----~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aG 197 (225)
T 1mzh_A 128 ------YLNEEEIKKAVEICIEAGADFIKTSTGF----APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAG 197 (225)
T ss_dssp ------GCCHHHHHHHHHHHHHHTCSEEECCCSC----SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT
T ss_pred ------CCCHHHHHHHHHHHHHhCCCEEEECCCC----CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhC
Confidence 1234568889999999999999654432 12234567888899988 6999999999 999999999998
Q ss_pred CCcEEEechHH
Q 015862 339 RADLVVYGRLF 349 (399)
Q Consensus 339 ~~D~V~~gR~~ 349 (399)
||.|+++++.
T Consensus 198 -A~~iG~s~~~ 207 (225)
T 1mzh_A 198 -ADRIGTSSGI 207 (225)
T ss_dssp -CSEEEESCHH
T ss_pred -chHHHHccHH
Confidence 9999888873
No 60
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.23 E-value=1.1e-10 Score=116.98 Aligned_cols=124 Identities=17% Similarity=0.185 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.|+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 147 e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~~~e~v~avR~a~g~d~~l~vDan~--- 198 (397)
T 2qde_A 147 EAVAEEALAVLREGFHFVKLKAGG---------------------P----LKADIAMVAEVRRAVGDDVDLFIDING--- 198 (397)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhhhhheeecccC---------------------C----HHHHHHHHHHHHHhhCCCCEEEEECCC---
Confidence 677899999999999999999763 2 367799999999999987 57776553
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++|+.+.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 264 (397)
T 2qde_A 199 ------AWTYDQALTTIRALEKYNLSKIE--QPL------PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAA 264 (397)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhCCCCEEE--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 441 1235677888999999999999998 89999999999999
Q ss_pred cEEEechH
Q 015862 341 DLVVYGRL 348 (399)
Q Consensus 341 D~V~~gR~ 348 (399)
|+|.+=-.
T Consensus 265 d~v~ik~~ 272 (397)
T 2qde_A 265 DGLMIKTQ 272 (397)
T ss_dssp SEEEECHH
T ss_pred CEEEEecc
Confidence 99988443
No 61
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.23 E-value=7.8e-11 Score=117.41 Aligned_cols=122 Identities=11% Similarity=0.141 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.|+ ++ .++..|+|++||+++|++ +|.++.+.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~d~e~v~avR~a~G~d~~l~vDan~--- 193 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGG--------------------TS----FKEDVRHINALQHTAGSSITMILDANQ--- 193 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSS--------------------SC----HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC--------------------CC----HHHHHHHHHHHHHhhCCCCEEEEECCC---
Confidence 778899999999999999999876 12 477899999999999987 57777653
Q ss_pred cCCCCCCChHHHHHHHHHhhhhh-CceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKY-GILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~-Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++ |++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++++.+.
T Consensus 194 ------~~~~~~a~~~~~~l~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 259 (382)
T 2gdq_A 194 ------SYDAAAAFKWERYFSEWTNIGWLE--EPL------PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRC 259 (382)
T ss_dssp ------CCCHHHHHTTHHHHTTCSCEEEEE--CCS------CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred ------CCCHHHHHHHHHHHhhccCCeEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 33578899999999999 999987 442 1235677888999999999999999 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 260 ~d~v~i 265 (382)
T 2gdq_A 260 LDIIQP 265 (382)
T ss_dssp CSEECC
T ss_pred CCEEec
Confidence 999987
No 62
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.22 E-value=1e-10 Score=115.86 Aligned_cols=129 Identities=14% Similarity=0.206 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.|+ ..++..|++++||+++|++ +|.++.+.
T Consensus 143 ~~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g~~~~l~vDan~--- 194 (369)
T 2p8b_A 143 ENMAEEAASMIQKGYQSFKMKVGT-------------------------NVKEDVKRIEAVRERVGNDIAIRVDVNQ--- 194 (369)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCcCEEEEEeCC-------------------------CHHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 457899999999999999999874 1578899999999999987 57666543
Q ss_pred cCCCCCCChHHHHH-HHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGL-YMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~-~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++ ++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++++.+.
T Consensus 195 ------~~~~~~a~~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 260 (369)
T 2p8b_A 195 ------GWKNSANTLTALRSLGHLNIDWIE--QPV------IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEA 260 (369)
T ss_dssp ------TTBSHHHHHHHHHTSTTSCCSCEE--CCB------CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 22457788 999999999999987 441 1235677888999999999999999 8999999999999
Q ss_pred CcEEEechHHhhCC
Q 015862 340 ADLVVYGRLFLANP 353 (399)
Q Consensus 340 ~D~V~~gR~~iadP 353 (399)
+|+|.+-...+.-.
T Consensus 261 ~d~v~ik~~~~GGi 274 (369)
T 2p8b_A 261 ADKVNIKLMKCGGI 274 (369)
T ss_dssp CSEEEECHHHHTSH
T ss_pred CCEEEeecchhCCH
Confidence 99999977666555
No 63
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.22 E-value=1.5e-10 Score=114.71 Aligned_cols=130 Identities=11% Similarity=0.049 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
++++++|+++++ +||++|+||.||+ + .++..|++++||+++|++ +|.++.+.
T Consensus 144 e~~~~~a~~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 197 (370)
T 1nu5_A 144 ARDIDSALEMIETRRHNRFKVKLGAR--------------------T----PAQDLEHIRSIVKAVGDRASVRVDVNQ-- 197 (370)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGCEEEEECTT--
T ss_pred HHHHHHHHHHHHhCCccEEEEecCCC--------------------C----hHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 567889999999 9999999998873 1 346789999999999976 56666543
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++++.+.
T Consensus 198 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~ 262 (370)
T 1nu5_A 198 -------GWDEQTASIWIPRLEEAGVELVE--QPV------PRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHA 262 (370)
T ss_dssp -------CCCHHHHHHHHHHHHHHTCCEEE--CCS------CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhcCcceEe--CCC------CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 23578899999999999999987 441 1235677888999999999999998 8999999999999
Q ss_pred CcEEEechHHhhCC
Q 015862 340 ADLVVYGRLFLANP 353 (399)
Q Consensus 340 ~D~V~~gR~~iadP 353 (399)
+|+|.+--..+.-.
T Consensus 263 ~d~v~ik~~~~GGi 276 (370)
T 1nu5_A 263 VDAFSLKLCNMGGI 276 (370)
T ss_dssp CSEEEECHHHHTSH
T ss_pred CCEEEEchhhcCCH
Confidence 99999976665554
No 64
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=99.20 E-value=1.2e-10 Score=117.86 Aligned_cols=121 Identities=14% Similarity=0.104 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.++ ..++..|+|++||+++|++ +|.|..+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~-------------------------~~~~d~e~v~avR~avG~d~~l~vDan~--- 238 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD-------------------------AARVDIERVRHVRKVLGDEVDILTDANT--- 238 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC-------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 678999999999999999999876 1477899999999999987 57666543
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.++ +||++.+.+ |+++++++++.+.
T Consensus 239 ------~~~~~eai~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 304 (428)
T 3bjs_A 239 ------AYTMADARRVLPVLAEIQAGWLE--EPF------ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA 304 (428)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCSCEE--CCS------CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC
Confidence 33578899999999999999987 441 1235677888999999 999999999 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 305 ~d~v~i 310 (428)
T 3bjs_A 305 VQVWQP 310 (428)
T ss_dssp EEEECC
T ss_pred CCEEEe
Confidence 999987
No 65
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.18 E-value=1.8e-10 Score=119.08 Aligned_cols=131 Identities=19% Similarity=0.182 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE-ecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR-LSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr-ls~~~~~~ 263 (399)
+.+.|.++.++|+|+|+||++||+. ++..+++++||+.++.-+|.++ +.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~------------------------~~~~~~i~~i~~~~~~~pvi~~~v~------ 305 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS------------------------VYQIAMVHYIKQKYPHLQVIGGNVV------ 305 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS------------------------HHHHHHHHHHHHHCTTCEEEEEEEC------
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc------------------------hhHHHHHHHHHHhCCCCceEecccc------
Confidence 4567788899999999999998642 5778999999999953466552 21
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeC--CCc-cccc---cc---CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHH
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVE--PRM-KTRE---EK---SECPHSLLPMRKAFKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~--~~~-~~~~---~~---~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~ 333 (399)
+ .+.++.++++|+|+|.+.. +.. .... .. ......+..+++.+++|||+.||+ ++.++.+
T Consensus 306 ------t----~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~k 375 (514)
T 1jcn_A 306 ------T----AAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVK 375 (514)
T ss_dssp ------S----HHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred ------h----HHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHH
Confidence 1 2357788899999998843 111 1100 01 112345667888889999999999 8999999
Q ss_pred HHHcCCCcEEEechHHhhCCcHH
Q 015862 334 AIAEGRADLVVYGRLFLANPDLP 356 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl~ 356 (399)
+|+.| ||+|++||+++++|+++
T Consensus 376 ala~G-Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 376 ALALG-ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp HHHTT-CSEEEESTTTTTSTTSS
T ss_pred HHHcC-CCeeeECHHHHcCCcCC
Confidence 99999 99999999999999764
No 66
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.18 E-value=1.9e-10 Score=112.43 Aligned_cols=128 Identities=19% Similarity=0.220 Sum_probs=88.5
Q ss_pred hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE-ecCCcccCCCCCCChHHH
Q 015862 195 AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR-LSPFANYMESGDSNPEAL 273 (399)
Q Consensus 195 aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr-ls~~~~~~~~~~~~~~~~ 273 (399)
+|+|+++||..++ ..+++ .|+.. .+.+.++|++||+ ++ .||.+| ++. +.+.+
T Consensus 144 ~~~~a~~i~~n~~---~~~~~----------~~~~~--~~~~~~~i~~vr~-~~-~Pv~vK~v~~---------g~~~e- 196 (332)
T 1vcf_A 144 LEADALAFHVNPL---QEAVQ----------RGDTD--FRGLVERLAELLP-LP-FPVMVKEVGH---------GLSRE- 196 (332)
T ss_dssp HTCSEEEEECCHH---HHHHT----------TSCCC--CTTHHHHHHHHCS-CS-SCEEEECSSS---------CCCHH-
T ss_pred cCCCceeeccchH---HHHhc----------CCCcc--HHHHHHHHHHHHc-CC-CCEEEEecCC---------CCCHH-
Confidence 5899999987653 22221 11111 1236899999999 73 489999 432 22333
Q ss_pred HHHHHHhhhhhCceEEEEeC--CCc-------cc---------ccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHH
Q 015862 274 GLYMAESLNKYGILYCHMVE--PRM-------KT---------REEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~--~~~-------~~---------~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~ 333 (399)
.++.+++.|+|+|.++. +.. .. .....+.+..+..+++++ ++|||++||+ |++++.+
T Consensus 197 ---~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k 273 (332)
T 1vcf_A 197 ---AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAK 273 (332)
T ss_dssp ---HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHH
T ss_pred ---HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHH
Confidence 36688999999999954 210 11 111223344567888888 7999999999 9999999
Q ss_pred HHHcCCCcEEEechHHhhCC
Q 015862 334 AIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadP 353 (399)
+|..| ||+|++||+++..+
T Consensus 274 al~~G-Ad~V~igr~~l~~~ 292 (332)
T 1vcf_A 274 ALALG-ADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHT-CSEEEECGGGHHHH
T ss_pred HHHhC-CChHhhhHHHHHHH
Confidence 99998 99999999999644
No 67
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.18 E-value=2.4e-10 Score=113.59 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++++++|++++++||++|+||.||+ + .++..|++++||+++|++ +|.++.+.
T Consensus 147 e~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~--- 199 (378)
T 2qdd_A 147 DQMLGLIAEAAAQGYRTHSAKIGGS--------------------D----PAQDIARIEAISAGLPDGHRVTFDVNR--- 199 (378)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS--------------------C----HHHHHHHHHHHHHSCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHHhhhheeecCCCC--------------------C----hHHHHHHHHHHHHHhCCCCEEEEeCCC---
Confidence 5678999999999999999998873 1 477899999999999976 56666553
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|+ +|+ |++ +| .. .++..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 200 ------~~~~~~a~~~~~~l~-~~i-~iE--qP-----~~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 261 (378)
T 2qdd_A 200 ------AWTPAIAVEVLNSVR-ARD-WIE--QP-----CQ---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGAC 261 (378)
T ss_dssp ------CCCHHHHHHHHTSCC-CCC-EEE--CC-----SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHhC-CCc-EEE--cC-----CC---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC
Confidence 335788999999999 999 876 33 11 5678888999999999999999 89999999999999
Q ss_pred cEEEechHHhhCCcHHHH
Q 015862 341 DLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 341 D~V~~gR~~iadPdl~~k 358 (399)
|+|.+-...+.-+.-..+
T Consensus 262 d~v~ik~~~~GGi~~~~~ 279 (378)
T 2qdd_A 262 EGVKIKPNRVGGLTRARQ 279 (378)
T ss_dssp SEEEECHHHHTSHHHHHH
T ss_pred CEEEecccccCCHHHHHH
Confidence 999998888777644333
No 68
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=99.17 E-value=3.5e-10 Score=112.91 Aligned_cols=128 Identities=14% Similarity=0.129 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++++++|++++++||++|+||.|+ ++ .++.+|+|++||+++|++ .|.++.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~~~e~v~avR~a~G~~~~l~vDan~--- 199 (389)
T 2oz8_A 147 DAFVSLFSHAASIGYSAFKIKVGH--------------------RD----FDRDLRRLELLKTCVPAGSKVMIDPNE--- 199 (389)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCC--------------------SS----HHHHHHHHHHHHTTSCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCEEEEccCC--------------------CC----HHHHHHHHHHHHHhhCCCCeEEEECCC---
Confidence 568899999999999999999876 12 357799999999999987 57776653
Q ss_pred cCCCCCCChHHHHHHHHHhhhh--hCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcC
Q 015862 262 YMESGDSNPEALGLYMAESLNK--YGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEG 338 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~--~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G 338 (399)
..+.++++++++.|++ .+++|++ +|. ...+++..+.+++.+ ++||++.+.+++++++++|+.|
T Consensus 200 ------~~~~~~a~~~~~~l~~~g~~i~~iE--qP~------~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~ 265 (389)
T 2oz8_A 200 ------AWTSKEALTKLVAIREAGHDLLWVE--DPI------LRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAH 265 (389)
T ss_dssp ------CBCHHHHHHHHHHHHHTTCCCSEEE--SCB------CTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTT
T ss_pred ------CCCHHHHHHHHHHHHhcCCCceEEe--CCC------CCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcC
Confidence 2357889999999999 8888877 441 123567788999999 9999999988999999999999
Q ss_pred CCcEEEechHHhhC
Q 015862 339 RADLVVYGRLFLAN 352 (399)
Q Consensus 339 ~~D~V~~gR~~iad 352 (399)
.+|+|.+. +-+..
T Consensus 266 ~~d~v~ik-GGit~ 278 (389)
T 2oz8_A 266 AADILNVH-GQVTD 278 (389)
T ss_dssp CCSEEEEC-SCHHH
T ss_pred CCCEEEEC-cCHHH
Confidence 99999998 54443
No 69
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.16 E-value=1.9e-10 Score=114.10 Aligned_cols=127 Identities=10% Similarity=0.008 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
.++|+++|++++++||++|+||.|+ ..++..|++++||+++|++ +|.++.+.
T Consensus 147 ~~~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g~~~~l~vDan~-- 199 (371)
T 2ps2_A 147 PEDMRARVAKYRAKGYKGQSVKISG-------------------------EPVTDAKRITAALANQQPDEFFIVDANG-- 199 (371)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCS-------------------------CHHHHHHHHHHHTTTCCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhChheEEeecCC-------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 3568999999999999999999874 1578899999999999987 57776653
Q ss_pred ccCCCCCCChHHHHHHHHHhh-hhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 261 NYMESGDSNPEALGLYMAESL-NKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~L-e~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.| +++|+ |++ +|. . .++..+.+++.+++||++.+.+ ++++++++|+.+
T Consensus 200 -------~~~~~~a~~~~~~l~~~~~i-~iE--~P~-----~---~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 261 (371)
T 2ps2_A 200 -------KLSVETALRLLRLLPHGLDF-ALE--APC-----A---TWRECISLRRKTDIPIIYDELATNEMSIVKILADD 261 (371)
T ss_dssp -------BCCHHHHHHHHHHSCTTCCC-EEE--CCB-----S---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHT
T ss_pred -------CcCHHHHHHHHHHHHhhcCC-cCc--CCc-----C---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 23578899999999 99999 887 431 1 5677888999999999999998 899999999999
Q ss_pred CCcEEEechHHhhCC
Q 015862 339 RADLVVYGRLFLANP 353 (399)
Q Consensus 339 ~~D~V~~gR~~iadP 353 (399)
.+|+|.+-...+.-.
T Consensus 262 ~~d~v~ik~~~~GGi 276 (371)
T 2ps2_A 262 AAEGIDLKISKAGGL 276 (371)
T ss_dssp CCSEEEEEHHHHTSH
T ss_pred CCCEEEechhhcCCH
Confidence 999999977665554
No 70
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.16 E-value=2.8e-10 Score=113.78 Aligned_cols=124 Identities=16% Similarity=0.242 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++++|++++++||+.|+||.+++ + .++..|+|++||+++|++ .|.|+.+.
T Consensus 166 ~~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 219 (392)
T 1tzz_A 166 LSMLRGEMRGYLDRGYNVVKMKIGGA--------------------P----IEEDRMRIEAVLEEIGKDAQLAVDANG-- 219 (392)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC--
Confidence 46688999999999999999998861 1 467799999999999987 57776653
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC-
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG- 338 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G- 338 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++|+.|
T Consensus 220 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 284 (392)
T 1tzz_A 220 -------RFNLETGIAYAKMLRDYPLFWYE--EVG------DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGG 284 (392)
T ss_dssp -------CCCHHHHHHHHHHHTTSCCSEEE--CCS------CTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSC
T ss_pred -------CCCHHHHHHHHHHHHHcCCCeec--CCC------ChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999987 442 1235677888999999999999998 899999999999
Q ss_pred ---CCcEEEec
Q 015862 339 ---RADLVVYG 346 (399)
Q Consensus 339 ---~~D~V~~g 346 (399)
.+|+|.+-
T Consensus 285 ~~~~~d~v~ik 295 (392)
T 1tzz_A 285 MRPDRDWLQFD 295 (392)
T ss_dssp CCTTTCEECCC
T ss_pred CccCCcEEEEC
Confidence 99999874
No 71
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=99.16 E-value=6.2e-10 Score=112.64 Aligned_cols=138 Identities=12% Similarity=0.173 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
.+++++.|+.+++.||+.|+|+.++.+. +.+|. ..++..+...++|++||+++|++ .|.++.+.
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~~~-------------~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~- 212 (433)
T 3rcy_A 147 ADMAAESAADCVARGYTAVKFDPAGPYT-------------LRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG- 212 (433)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCCCB-------------TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS-
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcc-------------cccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC-
Confidence 3567888899999999999999887321 12343 23456788999999999999987 68887764
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++.|++||+ +|. .+.+.+..+.|++.+++||++.+.+ ++++++++|+.|
T Consensus 213 --------~~t~~~A~~~~~~Le~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g 276 (433)
T 3rcy_A 213 --------QFTTAGAIRLGQAIEPYSPLWYE--EPV------PPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREG 276 (433)
T ss_dssp --------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTT
T ss_pred --------CCCHHHHHHHHHHhhhcCCCEEE--CCC------ChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcC
Confidence 33578899999999999999998 442 1235677889999999999999999 899999999999
Q ss_pred CCcEEEechHH
Q 015862 339 RADLVVYGRLF 349 (399)
Q Consensus 339 ~~D~V~~gR~~ 349 (399)
.+|+|.+--.-
T Consensus 277 ~~D~v~~d~~~ 287 (433)
T 3rcy_A 277 AAAILQPALGR 287 (433)
T ss_dssp CCSEECCCHHH
T ss_pred CCCEEEeCchh
Confidence 99999875443
No 72
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.16 E-value=8.2e-10 Score=109.91 Aligned_cols=103 Identities=17% Similarity=0.070 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH
Q 015862 234 RFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR 313 (399)
Q Consensus 234 r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir 313 (399)
.+..++|++||+.++ .||.+|... +. +.++.+.++|+|.|.++...-.+.+...+.++.+..++
T Consensus 211 ~~~~~~i~~i~~~~~-~Pv~vkgv~-----------t~----e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~ 274 (380)
T 1p4c_A 211 SFNWEALRWLRDLWP-HKLLVKGLL-----------SA----EDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSV 274 (380)
T ss_dssp TCCHHHHHHHHHHCC-SEEEEEEEC-----------CH----HHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHH
T ss_pred cccHHHHHHHHHhcC-CCEEEEecC-----------cH----HHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHH
Confidence 455799999999984 378887421 22 35777888999999994321111222344577888999
Q ss_pred hhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 314 KAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 314 ~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
+.+++|||++||+ +.+++.++|..| ||+|++||+++...
T Consensus 275 ~~~~~pVia~GGI~~~~dv~kal~~G-AdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 275 AKTGKPVLIDSGFRRGSDIVKALALG-AEAVLLGRATLYGL 314 (380)
T ss_dssp HHHCSCEEECSSCCSHHHHHHHHHTT-CSCEEESHHHHHHH
T ss_pred HHcCCeEEEECCCCCHHHHHHHHHhC-CcHhhehHHHHHHH
Confidence 9999999999999 899999999998 99999999998754
No 73
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.14 E-value=7e-10 Score=109.74 Aligned_cols=130 Identities=10% Similarity=0.180 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|++++++||+.|+||.|++ + .+...++|++||+++|++ .|.++.+.
T Consensus 142 ~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~d~~~v~avr~a~g~~~~l~vDan~--- 194 (366)
T 1tkk_A 142 EEMAADAENYLKQGFQTLKIKVGKD--------------------D----IATDIARIQEIRKRVGSAVKLRLDANQ--- 194 (366)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 4568899999999999999998761 1 467899999999999987 57776653
Q ss_pred cCCCCCCChHHHHHHHHHhhhh--hCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 262 YMESGDSNPEALGLYMAESLNK--YGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~--~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++ +|++|++ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+
T Consensus 195 ------~~~~~~a~~~~~~l~~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 260 (366)
T 1tkk_A 195 ------GWRPKEAVTAIRKMEDAGLGIELVE--QPV------HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTR 260 (366)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCCEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHHhhcCCCceEEE--CCC------CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhC
Confidence 2357889999999999 9999987 441 1235677888999999999999998 899999999999
Q ss_pred CCcEEEechHHhhCC
Q 015862 339 RADLVVYGRLFLANP 353 (399)
Q Consensus 339 ~~D~V~~gR~~iadP 353 (399)
.+|+|.+--..+.-.
T Consensus 261 ~~d~v~ik~~~~GGi 275 (366)
T 1tkk_A 261 SADLINIKLMKAGGI 275 (366)
T ss_dssp CCSEEEECHHHHTSH
T ss_pred CCCEEEeehhhhcCH
Confidence 999999976665544
No 74
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=99.13 E-value=2.7e-10 Score=113.18 Aligned_cols=125 Identities=19% Similarity=0.245 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+++++.||+.|+|+.|+. |++ .+..++++++||+++|++ +|.++.|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~------------------g~~----~~~d~~~v~avR~a~g~~~~l~vDan~--- 202 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVM------------------GDD----PDTDYAIVKAVREAAGPEMEVQIDLAS--- 202 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTT------------------TSC----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCC------------------CCC----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 4568899999999999999999872 333 467789999999999988 68888764
Q ss_pred cCCCCCCCh-HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNP-EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~-~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+ .++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 203 ------~~~d~~~A~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~ 268 (374)
T 3sjn_A 203 ------KWHTCGHSAMMAKRLEEFNLNWIE--EPV------LADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSN 268 (374)
T ss_dssp ------TTCSHHHHHHHHHHSGGGCCSEEE--CSS------CTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHC
T ss_pred ------CCCCHHHHHHHHHHhhhcCceEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 234 78899999999999999998 442 1235677888999999999999999 8999999999999
Q ss_pred CcEEEec
Q 015862 340 ADLVVYG 346 (399)
Q Consensus 340 ~D~V~~g 346 (399)
+|+|.+-
T Consensus 269 ~d~v~~k 275 (374)
T 3sjn_A 269 ADIVQPD 275 (374)
T ss_dssp CSEECCB
T ss_pred CCEEEeC
Confidence 9999863
No 75
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.13 E-value=4.7e-10 Score=113.84 Aligned_cols=121 Identities=14% Similarity=0.202 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.|. + .++..|+|++||+++|++ +|.|+.+.
T Consensus 200 e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~d~e~v~avR~a~G~d~~l~vDan~--- 251 (441)
T 2hxt_A 200 EKLVRLAKEAVADGFRTIKLKVGA---------------------N----VQDDIRRCRLARAAIGPDIAMAVDANQ--- 251 (441)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEccCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC---
Confidence 568999999999999999999762 1 578899999999999987 57776653
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++|++|++ +|. ....++..+.+++.+ ++||++.+.+ ++++++++|+.|.
T Consensus 252 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 317 (441)
T 2hxt_A 252 ------RWDVGPAIDWMRQLAEFDIAWIE--EPT------SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA 317 (441)
T ss_dssp ------CCCHHHHHHHHHTTGGGCCSCEE--CCS------CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCeee--CCC------CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999987 441 123566788899988 5999999998 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 318 ~d~v~i 323 (441)
T 2hxt_A 318 VDLIQI 323 (441)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999987
No 76
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.13 E-value=8.9e-10 Score=108.15 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|++++++||+.|+||.|+ | .+..++++++||++ |++ .|.+..+.
T Consensus 141 ~~~~~~a~~~~~~Gf~~iKik~g~------------~-------------~~~d~~~v~avr~~-g~~~~l~vDan~--- 191 (345)
T 2zad_A 141 ENRVKEAKKIFEEGFRVIKIKVGE------------N-------------LKEDIEAVEEIAKV-TRGAKYIVDANM--- 191 (345)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS------------C-------------HHHHHHHHHHHHHH-STTCEEEEECTT---
T ss_pred HHHHHHHHHHHHcCcCEEEEeecC------------C-------------HHHHHHHHHHHHhh-CCCCeEEEECCC---
Confidence 457889999999999999999876 1 34558999999999 876 45554332
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCce--EEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGIL--YCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd--~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|+++|++ |++ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+
T Consensus 192 ------~~~~~~a~~~~~~l~~~~i~~~~iE--~P~------~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~ 257 (345)
T 2zad_A 192 ------GYTQKEAVEFARAVYQKGIDIAVYE--QPV------RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE 257 (345)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCCCSEEE--CCS------CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHHHhcCCCeeeee--CCC------CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhC
Confidence 33578899999999999999 987 442 1235677888999999999999998 899999999999
Q ss_pred CCcEEEe--chHHhhCCcHHHHHHhCC
Q 015862 339 RADLVVY--GRLFLANPDLPRRFELNA 363 (399)
Q Consensus 339 ~~D~V~~--gR~~iadPdl~~k~~~g~ 363 (399)
.+|+|.+ +|+-+.+.-...++.+-.
T Consensus 258 ~~d~v~ik~~~GGit~~~~i~~~A~~~ 284 (345)
T 2zad_A 258 AVDYVNIKLMKSGISDALAIVEIAESS 284 (345)
T ss_dssp CCSEEEECHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccHHHHHHHHHHHHHc
Confidence 9999999 888888776666665543
No 77
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.12 E-value=1.8e-10 Score=115.56 Aligned_cols=134 Identities=19% Similarity=0.122 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.+..+.++|+|+|+||++||+ .+++.++|+++|+.+|..+|.+.-.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~------------------------~~~~~e~i~~ir~~~~~~pviv~~v------- 202 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGH------------------------STRIIELIKKIKTKYPNLDLIAGNI------- 202 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCS------------------------SHHHHHHHHHHHHHCTTCEEEEEEE-------
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCC------------------------hHHHHHHHHHHHHHCCCCeEEEcCC-------
Confidence 355667788999999999987741 2678999999999996346665211
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCC--ccc----ccccCCCchhhHHHHh---hcCCcEEEeCCC-CHHHHHHH
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPR--MKT----REEKSECPHSLLPMRK---AFKGTFLVAGGY-DREDGNKA 334 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~--~~~----~~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 334 (399)
.+ .+.++.+++.|+|+|.+.... ... .....+....+..+++ .+++|||+.||+ |++++.++
T Consensus 203 ----~~----~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~a 274 (404)
T 1eep_A 203 ----VT----KEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKA 274 (404)
T ss_dssp ----CS----HHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHH
T ss_pred ----Cc----HHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHH
Confidence 12 245677888999999983210 000 0011223344555554 467999999999 89999999
Q ss_pred HHcCCCcEEEechHHhhCCcHHHH
Q 015862 335 IAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 335 L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
|+.| ||+|++||+++..|+++..
T Consensus 275 la~G-Ad~V~iG~~~l~~~e~~~~ 297 (404)
T 1eep_A 275 IAAG-ADSVMIGNLFAGTKESPSE 297 (404)
T ss_dssp HHHT-CSEEEECHHHHTBTTSSSC
T ss_pred HHcC-CCHHhhCHHHhcCCCCCcc
Confidence 9999 9999999999999988643
No 78
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.10 E-value=4.1e-10 Score=115.81 Aligned_cols=137 Identities=20% Similarity=0.188 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
+++.+.+.++.++|+|.|+|+.++|+. +...++++++|+.++..+|.+.-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~------------------------~~~~e~i~~i~~~~p~~pvi~g~------ 285 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS------------------------RRVIETLEMIKADYPDLPVVAGN------ 285 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS------------------------HHHHHHHHHHHHHCTTSCEEEEE------
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch------------------------HHHHHHHHHHHHHCCCceEEeCC------
Confidence 345778889999999999999887631 46689999999999644666521
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc---c---ccccCCCchhhHHHHh---hcCCcEEEeCCC-CHHHHH
Q 015862 263 MESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK---T---REEKSECPHSLLPMRK---AFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~---~---~~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~ 332 (399)
..+.++ ++.|+++|+|+|.++.+.-+ . .....+....+..+++ .+++|||+.||+ ++.++.
T Consensus 286 -----~~t~e~----a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~ 356 (494)
T 1vrd_A 286 -----VATPEG----TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIV 356 (494)
T ss_dssp -----ECSHHH----HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHH
T ss_pred -----cCCHHH----HHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHH
Confidence 112333 46777899999998532100 0 0011222333344443 368999999999 999999
Q ss_pred HHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 333 KAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
++|+.| ||+|++||+++++|+++.+.
T Consensus 357 kala~G-Ad~V~iGr~~l~~~e~~~~~ 382 (494)
T 1vrd_A 357 KALAAG-AESVMVGSIFAGTEEAPGET 382 (494)
T ss_dssp HHHHTT-CSEEEESHHHHTBTTSSSEE
T ss_pred HHHHcC-CCEEEECHHHhcCCcCCcce
Confidence 999999 99999999999999987553
No 79
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.06 E-value=1.6e-09 Score=108.13 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.++|+.|+ ..+...+++++||+++|++ +|.|+.|.
T Consensus 153 e~~~~~a~~~~~~G~~~iKiKvG~-------------------------~~~~d~~~v~avR~a~g~d~~l~vDan~--- 204 (389)
T 3ozy_A 153 DQAADELAGWVEQGFTAAKLKVGR-------------------------APRKDAANLRAMRQRVGADVEILVDANQ--- 204 (389)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEeeccCC-------------------------CHHHHHHHHHHHHHHcCCCceEEEECCC---
Confidence 456788888899999999999765 1345689999999999987 68887764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH-hhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR-KAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir-~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.++ +.+++||++.+.+ ++++++++++.+.
T Consensus 205 ------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~ 270 (389)
T 3ozy_A 205 ------SLGRHDALAMLRILDEAGCYWFE--EPL------SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDA 270 (389)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCSEEE--SCS------CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTC
T ss_pred ------CcCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 442 123566788899 9999999999999 8999999999999
Q ss_pred CcEEEechHHhhCC
Q 015862 340 ADLVVYGRLFLANP 353 (399)
Q Consensus 340 ~D~V~~gR~~iadP 353 (399)
+|+|.+-...+.-.
T Consensus 271 ~d~v~ik~~~~GGi 284 (389)
T 3ozy_A 271 IDVLQADASRAGGI 284 (389)
T ss_dssp CSEECCCTTTSSCH
T ss_pred CCEEEeCccccCCH
Confidence 99999865554443
No 80
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.06 E-value=5.5e-09 Score=103.16 Aligned_cols=133 Identities=20% Similarity=0.163 Sum_probs=93.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.++|+|.|.|+.+||. .+.+.+.|+++|+.++ .+|.+.--.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~------------------------~~~~~~~i~~i~~~~~-~~Vivg~v~------- 154 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH------------------------SLNIIRTLKEIKSKMN-IDVIVGNVV------- 154 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS------------------------BHHHHHHHHHHHHHCC-CEEEEEEEC-------
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC------------------------cHHHHHHHHHHHHhcC-CcEEEccCC-------
Confidence 44567778899999999988741 2567889999999883 355542111
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCC--Ccccc----cccCCCchhhHHH---HhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEP--RMKTR----EEKSECPHSLLPM---RKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~~~~~----~~~~~~~~~~~~i---r~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
+. +.++.+.++|+|+|.+... ..... ....+....+..+ .+.+++|||+.||| +++++.++|
T Consensus 155 ----t~----e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal 226 (361)
T 3khj_A 155 ----TE----EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL 226 (361)
T ss_dssp ----SH----HHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH
T ss_pred ----CH----HHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH
Confidence 22 3467788899999998421 11000 0112333344444 34468999999999 899999999
Q ss_pred HcCCCcEEEechHHhhCCcHHHHH
Q 015862 336 AEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 336 ~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
+.| ||.|++|++|+..++.+.++
T Consensus 227 a~G-Ad~V~vGs~~~~t~Esp~~~ 249 (361)
T 3khj_A 227 AVG-ASSVMIGSILAGTEESPGEK 249 (361)
T ss_dssp HHT-CSEEEESTTTTTBTTSSCEE
T ss_pred HcC-CCEEEEChhhhcCCcCCcch
Confidence 999 99999999999999877554
No 81
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.05 E-value=1.1e-09 Score=108.36 Aligned_cols=118 Identities=14% Similarity=0.203 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++|+++|++++++||++|+||.+ | ++..|+|++||+++|++ .|.+..+.
T Consensus 143 ~~~~~~a~~~~~~Gf~~vKik~~----------~-----------------~~~~e~v~avr~~~g~~~~l~vDan~--- 192 (368)
T 1sjd_A 143 PQLLDVVGGYLDEGYVRIKLKIE----------P-----------------GWDVEPVRAVRERFGDDVLLQVDANT--- 192 (368)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECB----------T-----------------TBSHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCccEEEEecC----------c-----------------hhHHHHHHHHHHhcCCCceEEEeccC---
Confidence 56789999999999999999952 1 34489999999999986 45444332
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++ +++++.|+++|++|++ +|. ....++..+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 193 ------~~~~~~-~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 257 (368)
T 1sjd_A 193 ------AYTLGD-APQLARLDPFGLLLIE--QPL------EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV 257 (368)
T ss_dssp ------CCCGGG-HHHHHTTGGGCCSEEE--CCS------CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHH-HHHHHHHHhcCCCeEe--CCC------ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC
Confidence 224566 8999999999999987 441 1235677888999999999999998 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 258 d~v~i 262 (368)
T 1sjd_A 258 QIVNI 262 (368)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99987
No 82
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=99.04 E-value=1.3e-09 Score=109.02 Aligned_cols=134 Identities=11% Similarity=0.034 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEE-ccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEE
Q 015862 177 EIPQIVNDFRLAARNAIEAGFDGVEL-HGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGI 254 (399)
Q Consensus 177 eI~~ii~~f~~aA~~a~~aGfDgVeI-h~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~v 254 (399)
+.+++++++++.|+.+++.||+.++| ..|.+ +.+ .+--.+++++||+++|++ +|.+
T Consensus 148 ~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~~~v~avR~a~G~d~~l~v 205 (394)
T 3mqt_A 148 TLSEIVEAYKPLIAKAKERGAKAVKVCIIPND------------------KVS----DKEIVAYLRELREVIGWDMDMMV 205 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT------------------TSC----HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEecccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEEE
Confidence 56778888999999999999999999 45431 012 344689999999999987 6888
Q ss_pred EecCCcccCCCCCCC-hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 255 RLSPFANYMESGDSN-PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 255 rls~~~~~~~~~~~~-~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
+.|. .. +.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++
T Consensus 206 Dan~---------~~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 268 (394)
T 3mqt_A 206 DCLY---------RWTDWQKARWTFRQLEDIDLYFIE--ACL------QHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQ 268 (394)
T ss_dssp ECTT---------CCSCHHHHHHHHHHTGGGCCSEEE--SCS------CTTCHHHHHHHHHHSSSEEEECTTCCHHHHHH
T ss_pred ECCC---------CCCCHHHHHHHHHHHhhcCCeEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHH
Confidence 7764 33 578899999999999999998 442 1224567888999999999999999 899999
Q ss_pred HHHHcCCCcEEEechHH
Q 015862 333 KAIAEGRADLVVYGRLF 349 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~~ 349 (399)
++++.|.+|+|.+--.-
T Consensus 269 ~~l~~~~~d~v~~k~~~ 285 (394)
T 3mqt_A 269 EWLEKTGISVVQSDYNR 285 (394)
T ss_dssp HHHHHHCCSEECCCTTT
T ss_pred HHHHcCCCCeEecCccc
Confidence 99999999999875443
No 83
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=99.04 E-value=3.7e-09 Score=105.91 Aligned_cols=147 Identities=10% Similarity=0.098 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchh-hhhcccCcccCCCCCCCC--chhhhhHHHHHHHHHHHHHhCCC-ceEEEecC
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYL-IDQFLKDQVNDRTDQYGG--SLENRCRFALEIVEAVSNEIGAD-RVGIRLSP 258 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyL-l~qFlSp~~N~R~D~yGG--slenR~r~~~eii~avR~~vg~~-~v~vrls~ 258 (399)
+++++.|+.+++.||..++|+.|..-. -.. .|..+...+ |. ..+.-.+..++++++||+++|++ +|.++.|.
T Consensus 135 e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~--~~~~~~~~~--g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~ 210 (401)
T 3sbf_A 135 EGIYDLVEGFLEKGYKHIRCQLGFYGGVPTD--LHTTQNPTE--GSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE 210 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCCCSCGGG--SCCCSSCCS--SEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCccccc--ccccccccc--cccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 556777888899999999999875100 000 000000001 11 12233688899999999999987 68888764
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHc
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++++.
T Consensus 211 ---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 273 (401)
T 3sbf_A 211 ---------RLFPNQAIQFAKEVEQYKPYFIE--DIL------PPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIAN 273 (401)
T ss_dssp ---------CSCHHHHHHHHHHHGGGCCSCEE--CSS------CTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHT
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhc
Confidence 33578899999999999999988 442 1235667888999999999999999 89999999999
Q ss_pred CCCcEEEechHHh
Q 015862 338 GRADLVVYGRLFL 350 (399)
Q Consensus 338 G~~D~V~~gR~~i 350 (399)
|.+|+|.+--..+
T Consensus 274 ~~~d~v~~k~~~~ 286 (401)
T 3sbf_A 274 RRIDFIRCHVSQI 286 (401)
T ss_dssp TCCSEECCCGGGG
T ss_pred CCCCEEecCcccc
Confidence 9999998755443
No 84
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=99.02 E-value=3.2e-09 Score=106.51 Aligned_cols=136 Identities=15% Similarity=0.186 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-ch-hhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SL-ENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-sl-enR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
+++++.|+.+++.||+.++|+.+..|- .++| .. ....+-.++++++||+++|++ +|.|+.|.
T Consensus 153 e~~~~~a~~~~~~G~~~~KlK~g~~~~--------------~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~- 217 (404)
T 4e5t_A 153 DMAAEAAAKAVDQGFTAVKFDPAGAYT--------------IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG- 217 (404)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCCB--------------TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS-
T ss_pred HHHHHHHHHHHHcCCCEEeeCCCCCCc--------------ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC-
Confidence 556778888889999999999775211 1122 11 223567799999999999987 67877664
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++|+.|
T Consensus 218 --------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 281 (404)
T 4e5t_A 218 --------QFTVSGAKRLARRLEAYDPLWFE--EPI------PPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETG 281 (404)
T ss_dssp --------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHT
T ss_pred --------CcCHHHHHHHHHHHhhcCCcEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 33578899999999999999998 442 1225667888999999999999999 899999999999
Q ss_pred CCcEEEechHH
Q 015862 339 RADLVVYGRLF 349 (399)
Q Consensus 339 ~~D~V~~gR~~ 349 (399)
.+|+|.+--..
T Consensus 282 a~d~v~~d~~~ 292 (404)
T 4e5t_A 282 AASILQMNLGR 292 (404)
T ss_dssp CCSEECCCTTT
T ss_pred CCCEEecCccc
Confidence 99999874433
No 85
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.01 E-value=3.4e-09 Score=104.21 Aligned_cols=133 Identities=18% Similarity=0.167 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE-ecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR-LSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr-ls~~~~~~ 263 (399)
..+.++++.++|+|.|.|+.+||+. +.+.++|++||+..+.-+|.++ +.
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~------------------------~~~~e~I~~ir~~~~~~~Vi~G~V~------ 150 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHA------------------------KYVGKTLKSLRQLLGSRCIMAGNVA------ 150 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSS------------------------HHHHHHHHHHHHHHTTCEEEEEEEC------
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCc------------------------HhHHHHHHHHHHhcCCCeEEEcCcC------
Confidence 4667889999999999999998741 3468999999999854466664 21
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCC--Cccccc-ccCCCchhhHHHHhhcCC--cEEEeCCC-CHHHHHHHHHc
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEP--RMKTRE-EKSECPHSLLPMRKAFKG--TFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~~~~~~-~~~~~~~~~~~ir~~~~~--pvi~~Ggi-t~~~a~~~L~~ 337 (399)
+.+ .++.++++|+|+|.++.+ +..... ........+..|++.... |||+.||| ++.++.++|+.
T Consensus 151 ------T~e----~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~kALa~ 220 (361)
T 3r2g_A 151 ------TYA----GADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKALAF 220 (361)
T ss_dssp ------SHH----HHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHHHHHHT
T ss_pred ------CHH----HHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHHHHHHc
Confidence 223 466788899999998422 111000 000011244445554443 99999999 89999999999
Q ss_pred CCCcEEEechHHhhCCcHHHH
Q 015862 338 GRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 338 G~~D~V~~gR~~iadPdl~~k 358 (399)
| ||+|+|||+|+...+-+-+
T Consensus 221 G-Ad~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 221 G-ADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp T-CSEEEESGGGTTBTTSSSC
T ss_pred C-CCEEEEChHHhCCccCCce
Confidence 9 9999999999998764433
No 86
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=99.01 E-value=4e-09 Score=106.44 Aligned_cols=149 Identities=13% Similarity=0.177 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC--------chhhhhHHHHHHHHHHHHHhCCC-ceE
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG--------SLENRCRFALEIVEAVSNEIGAD-RVG 253 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG--------slenR~r~~~eii~avR~~vg~~-~v~ 253 (399)
+++++.|+.+++.||..++|+.+...+...|-.+..+...+...+ ..+.-.+..+++|++||+++|++ +|.
T Consensus 151 e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~l~ 230 (424)
T 3v3w_A 151 DSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIHLL 230 (424)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCcEE
Confidence 566778888899999999999875211000000000000000000 01122567899999999999987 688
Q ss_pred EEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 254 IRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 254 vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
|+.|. ..+.++++++++.|++.|++|++ +|. .....+..+.+++.+++||++.+.+ ++++++
T Consensus 231 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 293 (424)
T 3v3w_A 231 HDVHH---------RLTPIEAARLGKALEPYHLFWME--DAV------PAENQESFKLIRQHTTTPLAVGEVFNSIHDCR 293 (424)
T ss_dssp EECTT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CCSSTTHHHHHHHHCCSCEEECTTCCSGGGTH
T ss_pred EeCCC---------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChHhHHHHHHHHhhCCCCEEEccCcCCHHHHH
Confidence 87764 33678899999999999999998 442 1235667888999999999999999 899999
Q ss_pred HHHHcCCCcEEEechH
Q 015862 333 KAIAEGRADLVVYGRL 348 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~ 348 (399)
++|+.|.+|+|.+--.
T Consensus 294 ~~i~~ga~d~v~~k~~ 309 (424)
T 3v3w_A 294 ELIQNQWIDYIRTTIV 309 (424)
T ss_dssp HHHHTTCCSEECCCTT
T ss_pred HHHHcCCCCeEeecch
Confidence 9999999999987543
No 87
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=99.01 E-value=2.7e-09 Score=106.67 Aligned_cols=131 Identities=8% Similarity=0.046 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEE-ccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEE
Q 015862 177 EIPQIVNDFRLAARNAIEAGFDGVEL-HGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGI 254 (399)
Q Consensus 177 eI~~ii~~f~~aA~~a~~aGfDgVeI-h~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~v 254 (399)
+.+++++++++.|+.+++.||..++| ..|.+ ..+ .+--++++++||+++|++ +|.+
T Consensus 153 ~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~e~v~avR~a~G~d~~l~v 210 (394)
T 3mkc_A 153 SLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKA------------------DWS----TKEVAYYLRELRGILGHDTDMMV 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCTTC------------------CCC----HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEeCccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEEE
Confidence 46778888999999999999999999 44421 012 234589999999999987 6787
Q ss_pred EecCCcccCCCCCCC-hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 255 RLSPFANYMESGDSN-PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 255 rls~~~~~~~~~~~~-~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
+.+. .. +.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++
T Consensus 211 DaN~---------~~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 273 (394)
T 3mkc_A 211 DYLY---------RFTDWYEVARLLNSIEDLELYFAE--ATL------QHDDLSGHAKLVENTRSRICGAEMSTTRFEAE 273 (394)
T ss_dssp ECTT---------CCCCHHHHHHHHHHTGGGCCSEEE--SCS------CTTCHHHHHHHHHHCSSCBEECTTCCHHHHHH
T ss_pred eCCC---------CCCCHHHHHHHHHHhhhcCCeEEE--CCC------CchhHHHHHHHHhhCCCCEEeCCCCCCHHHHH
Confidence 7664 33 578899999999999999998 442 1224567888999999999999999 899999
Q ss_pred HHHHcCCCcEEEec
Q 015862 333 KAIAEGRADLVVYG 346 (399)
Q Consensus 333 ~~L~~G~~D~V~~g 346 (399)
++++.|.+|+|.+-
T Consensus 274 ~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 274 EWITKGKVHLLQSD 287 (394)
T ss_dssp HHHHTTCCSEECCC
T ss_pred HHHHcCCCCeEecC
Confidence 99999999999874
No 88
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=99.01 E-value=5e-09 Score=105.34 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCch-hhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSL-ENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGsl-enR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++.||+.++|+.+..|- ...|... ....+..+++|++||+++|++ +|.++.|.
T Consensus 146 e~~~~~a~~~~~~G~~~iKlK~g~~~~-------------~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~-- 210 (412)
T 4e4u_A 146 DLAAECAAENVKLGFTAVKFDPAGPYT-------------AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG-- 210 (412)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCCB-------------TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS--
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCc-------------cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 566788888899999999999775321 0112111 122567899999999999987 68887664
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 211 -------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 275 (412)
T 4e4u_A 211 -------QMVPSSAIRLAKRLEKYDPLWFE--EPV------PPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGG 275 (412)
T ss_dssp -------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHhhhcCCcEEE--CCC------ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCC
Confidence 33578899999999999999998 442 1225677888999999999999999 8999999999999
Q ss_pred CcEEEech
Q 015862 340 ADLVVYGR 347 (399)
Q Consensus 340 ~D~V~~gR 347 (399)
+|+|.+--
T Consensus 276 ~d~v~~d~ 283 (412)
T 4e4u_A 276 ASILQLNV 283 (412)
T ss_dssp CSEECCCT
T ss_pred CCEEEeCc
Confidence 99998743
No 89
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.00 E-value=5.3e-08 Score=94.84 Aligned_cols=132 Identities=19% Similarity=0.185 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
|.+.+..+.++|.|+|.+|.++ | .++++.+|+. | -+|...++.
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g~---------p--------------------~~~~~~l~~~-g-i~vi~~v~t------ 127 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGND---------P--------------------GEHIAEFRRH-G-VKVIHKCTA------ 127 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEESC---------C--------------------HHHHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHhcCCCEEEEcCCC---------c--------------------HHHHHHHHHc-C-CCEEeeCCC------
Confidence 3455677788999999998654 1 3567777775 3 245544431
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc--cCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE--KSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~--~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
.+ .++.+++.|+|+|.++......... ....+..+..+++.+++||++.||+ +++++.++++.| +|
T Consensus 128 ------~~----~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~G-Ad 196 (328)
T 2gjl_A 128 ------VR----HALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALG-AD 196 (328)
T ss_dssp ------HH----HHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CS
T ss_pred ------HH----HHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CC
Confidence 22 3455778899999986433211101 1234567788888889999999999 899999999998 99
Q ss_pred EEEechHHhhCCc------HHHHHHhCCC
Q 015862 342 LVVYGRLFLANPD------LPRRFELNAP 364 (399)
Q Consensus 342 ~V~~gR~~iadPd------l~~k~~~g~~ 364 (399)
+|.+||+++..|+ +.+++.++..
T Consensus 197 gV~vGs~~~~~~e~~~~~~~k~~~~~~~~ 225 (328)
T 2gjl_A 197 AINMGTRFLATRECPIHPAVKAAIRAADE 225 (328)
T ss_dssp EEEESHHHHTSSSSCSCHHHHHHHHHCCT
T ss_pred EEEECHHHHcCccccccHHHHHHHHhccc
Confidence 9999999999999 8888887654
No 90
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=99.00 E-value=4.4e-09 Score=106.05 Aligned_cols=148 Identities=9% Similarity=0.066 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC--chhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG--SLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG--slenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
+++++.|+.+++.||..|+|+.|..-.-.. ..|..|.-. -|. ..+...+..+++|++||+++|++ +|.++.|.
T Consensus 156 e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~- 231 (422)
T 3tji_A 156 EALFASVDALIAQGYRHIRCQLGFYGGTPS-ALHAPDNPT--PGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE- 231 (422)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCCCBCGG-GSCCCSSCC--SSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT-
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCcccc-ccccccccc--ccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC-
Confidence 556778888899999999999874100000 000000000 011 12334788999999999999988 68888764
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.|++.+++||++.+.+ ++++++++|+.|
T Consensus 232 --------~~~~~~A~~~~~~Le~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~g 295 (422)
T 3tji_A 232 --------RLFPQQAVQLAKQLEPFQPYFIE--DIL------PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNR 295 (422)
T ss_dssp --------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTT
T ss_pred --------CCCHHHHHHHHHHHHhhCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcC
Confidence 33578899999999999999998 442 1224567888999999999999999 899999999999
Q ss_pred CCcEEEechHHh
Q 015862 339 RADLVVYGRLFL 350 (399)
Q Consensus 339 ~~D~V~~gR~~i 350 (399)
.+|+|.+--.-+
T Consensus 296 a~d~v~~k~~~~ 307 (422)
T 3tji_A 296 RIDFIRCHVSQI 307 (422)
T ss_dssp CCSEECCCGGGG
T ss_pred CCCEEecCcccc
Confidence 999998754443
No 91
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=99.00 E-value=7.1e-09 Score=104.12 Aligned_cols=140 Identities=11% Similarity=0.105 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchh--hhhcccCcccCCCCCCCCc---hhhhhHHHHHHHHHHHHHhCCC-ceEEEe
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYL--IDQFLKDQVNDRTDQYGGS---LENRCRFALEIVEAVSNEIGAD-RVGIRL 256 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyL--l~qFlSp~~N~R~D~yGGs---lenR~r~~~eii~avR~~vg~~-~v~vrl 256 (399)
+++++.|+.+++.||+.++|+.+..-. ...+ .|-. .+.+... -....|+.+++|++||+++|++ +|.|+.
T Consensus 145 e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~-~pG~---~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDa 220 (409)
T 3go2_A 145 DGVKRTAEEARERQFRAIKTNIFIHDDGPLHAW-RPGF---AVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDL 220 (409)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCEECSSSSCEEC-BGGG---TBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccccccccccc-ccCC---CccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 455677788889999999999721000 0000 0000 0000000 1234789999999999999988 688887
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 335 (399)
|. ..+.++++++++.|++.|++||+ .|. ...+..+.+++.+++||++.+.+ ++++++++|
T Consensus 221 N~---------~~~~~~A~~~~~~L~~~~i~~iE--~P~--------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 281 (409)
T 3go2_A 221 NF---------NAKPEGYLKILRELADFDLFWVE--IDS--------YSPQGLAYVRNHSPHPISSCETLFGIREFKPFF 281 (409)
T ss_dssp TT---------CSCHHHHHHHHHHTTTSCCSEEE--CCC--------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHH
T ss_pred CC---------CCCHHHHHHHHHHHhhcCCeEEE--eCc--------CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHH
Confidence 64 33678899999999999999999 331 25567888999999999999999 899999999
Q ss_pred HcCCCcEEEe
Q 015862 336 AEGRADLVVY 345 (399)
Q Consensus 336 ~~G~~D~V~~ 345 (399)
+.|.+|+|.+
T Consensus 282 ~~~~~d~v~~ 291 (409)
T 3go2_A 282 DANAVDVAIV 291 (409)
T ss_dssp HTTCCSEEEE
T ss_pred HhCCCCEEEe
Confidence 9999999876
No 92
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=99.00 E-value=5.4e-09 Score=105.27 Aligned_cols=149 Identities=10% Similarity=0.087 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccC-CCCCCCC-------chhhhhHHHHHHHHHHHHHhCCC-ceE
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVND-RTDQYGG-------SLENRCRFALEIVEAVSNEIGAD-RVG 253 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~-R~D~yGG-------slenR~r~~~eii~avR~~vg~~-~v~ 253 (399)
+++++.|+.+++.||..++|+.+..-....|-.+..+. +...-|+ ..+.-.+..+++|++||+++|++ +|.
T Consensus 145 e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~l~ 224 (418)
T 3r4e_A 145 AETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHHLL 224 (418)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCeEE
Confidence 55678888889999999999987521000000000000 0000000 11223566799999999999987 688
Q ss_pred EEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 254 IRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 254 vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
++.|. ..+.++++++++.|++.|++||+ +|. .+...+..+.|++.+++||++.+.+ ++++++
T Consensus 225 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 287 (418)
T 3r4e_A 225 HDGHH---------RYTPQEAANLGKMLEPYQLFWLE--DCT------PAENQEAFRLVRQHTVTPLAVGEIFNTIWDAK 287 (418)
T ss_dssp EECTT---------CSCHHHHHHHHHHHGGGCCSEEE--SCS------CCSSGGGGHHHHHHCCSCEEECTTCCSGGGTH
T ss_pred EeCCC---------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CccCHHHHHHHHhcCCCCEEEcCCcCCHHHHH
Confidence 87764 33578899999999999999998 442 1235667888999999999999999 899999
Q ss_pred HHHHcCCCcEEEechH
Q 015862 333 KAIAEGRADLVVYGRL 348 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~ 348 (399)
++|+.|.+|+|.+--.
T Consensus 288 ~~l~~~a~d~v~~k~~ 303 (418)
T 3r4e_A 288 DLIQNQLIDYIRATVV 303 (418)
T ss_dssp HHHHTTCCSEECCCTT
T ss_pred HHHHcCCCCeEecCcc
Confidence 9999999999987543
No 93
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.98 E-value=4e-09 Score=106.48 Aligned_cols=149 Identities=13% Similarity=0.088 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCC----CC----chhhhhHHHHHHHHHHHHHhCCC-ceE
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQY----GG----SLENRCRFALEIVEAVSNEIGAD-RVG 253 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~y----GG----slenR~r~~~eii~avR~~vg~~-~v~ 253 (399)
+++++.|+.+++.||..++|+.+..-+...+-.+..+...+.- -+ ..+.-.+..+++|++||+++|++ +|.
T Consensus 152 e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d~~l~ 231 (425)
T 3vcn_A 152 EDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWDVHLL 231 (425)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEE
Confidence 5667888888999999999998742110000000000000000 00 01112456799999999999987 688
Q ss_pred EEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 254 IRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 254 vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
|+.|. ..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++
T Consensus 232 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 294 (425)
T 3vcn_A 232 HDVHH---------RLTPIEAARLGKDLEPYRLFWLE--DSV------PAENQAGFRLIRQHTTTPLAVGEIFAHVWDAK 294 (425)
T ss_dssp EECTT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CCSSTTHHHHHHHHCCSCEEECTTCCSGGGTH
T ss_pred EECCC---------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHH
Confidence 87764 33578899999999999999998 442 1235667888999999999999999 899999
Q ss_pred HHHHcCCCcEEEechH
Q 015862 333 KAIAEGRADLVVYGRL 348 (399)
Q Consensus 333 ~~L~~G~~D~V~~gR~ 348 (399)
++|+.|.+|+|.+--.
T Consensus 295 ~~i~~~a~d~v~~k~~ 310 (425)
T 3vcn_A 295 QLIEEQLIDYLRATVL 310 (425)
T ss_dssp HHHHTTCCSEECCCTT
T ss_pred HHHHcCCCCeEecChh
Confidence 9999999999987543
No 94
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.97 E-value=4.8e-09 Score=104.81 Aligned_cols=121 Identities=11% Similarity=0.029 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+++++.||+.++|+.+++ .+--.+++++||+++|++ .|.|+.+.
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDaN~--- 208 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFD-------------------------DARDVRNALHVRELLGAATPLMADANQ--- 208 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSC-------------------------HHHHHHHHHHHHHHHCSSSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-------------------------HHHHHHHHHHHHHhcCCCceEEEeCCC---
Confidence 3468889999999999999997641 233589999999999988 68888765
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCC-chhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSEC-PHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~-~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+.. .+..+.+++.+++||++.+.+ ++++++++++.+.
T Consensus 209 ------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 274 (392)
T 3ddm_A 209 ------GWDLPRARQMAQRLGPAQLDWLE--EPL------RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARS 274 (392)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCEEE--CCC------CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 442 1224 667888999999999999998 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 275 ~d~v~~ 280 (392)
T 3ddm_A 275 LRVMQP 280 (392)
T ss_dssp EEEECC
T ss_pred CCEEEe
Confidence 999987
No 95
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.97 E-value=4.9e-08 Score=95.07 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.+..+.++|.|.|.+|+++ | .++++.+|+. | -+|.+.++.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~---------p--------------------~~~~~~l~~~-g-~~v~~~v~s------ 133 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGN---------P--------------------TKYIRELKEN-G-TKVIPVVAS------ 133 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSC---------C--------------------HHHHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHHCCCCEEEECCCC---------c--------------------HHHHHHHHHc-C-CcEEEEcCC------
Confidence 3556667788999999998654 1 2456667663 3 255555532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
. +.++.+++.|+|+|-++.+...........+..+..+++.+++||++.||| |++++.++++.| +|.|
T Consensus 134 ------~----~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~G-A~gV 202 (326)
T 3bo9_A 134 ------D----SLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALG-AEAV 202 (326)
T ss_dssp ------H----HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEE
T ss_pred ------H----HHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhC-CCEE
Confidence 2 235567788999998875432211112234567788888899999999999 799999999998 9999
Q ss_pred EechHHhhCCcH
Q 015862 344 VYGRLFLANPDL 355 (399)
Q Consensus 344 ~~gR~~iadPdl 355 (399)
.+|++++..++.
T Consensus 203 ~vGs~~~~~~e~ 214 (326)
T 3bo9_A 203 QMGTRFVASVES 214 (326)
T ss_dssp EESHHHHTBSSC
T ss_pred EechHHHcCccc
Confidence 999999988863
No 96
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.96 E-value=6.8e-09 Score=104.79 Aligned_cols=145 Identities=13% Similarity=0.127 Sum_probs=102.1
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhh---------cccCcccCCCC-CCCCchhhhhHHHHHHHHHHHHHhCCC-ceE
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQ---------FLKDQVNDRTD-QYGGSLENRCRFALEIVEAVSNEIGAD-RVG 253 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~q---------FlSp~~N~R~D-~yGGslenR~r~~~eii~avR~~vg~~-~v~ 253 (399)
.++.|+.+++.||+.|+|+.|..-+-.. -..|....+.+ +-+=..+...|+..+++++||+++|++ +|.
T Consensus 153 ~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G~d~~L~ 232 (426)
T 4e4f_A 153 VLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFGFNEHLL 232 (426)
T ss_dssp HHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 3455566788999999999775211000 00111111100 001123456889999999999999988 688
Q ss_pred EEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHH
Q 015862 254 IRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGN 332 (399)
Q Consensus 254 vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 332 (399)
++.+. ..+.++++++++.|+++|++|++ +|. .+.+.+..+.+++.+++||++.+.+ ++++++
T Consensus 233 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 295 (426)
T 4e4f_A 233 HDMHH---------RLTPIEAARFGKSVEDYRLFWME--DPT------PAENQACFRLIRQHTVTPIAVGEVFNSIWDCK 295 (426)
T ss_dssp EECTT---------CSCHHHHHHHHHHTGGGCCSEEE--CCS------CCSSGGGGHHHHTTCCSCEEECTTCCSGGGTH
T ss_pred EECCC---------CCCHHHHHHHHHHHhhcCCCEEE--CCC------ChHHHHHHHHHHhcCCCCEEeCCCcCCHHHHH
Confidence 87764 33678899999999999999998 442 1235667888999999999999998 899999
Q ss_pred HHHHcCCCcEEEec
Q 015862 333 KAIAEGRADLVVYG 346 (399)
Q Consensus 333 ~~L~~G~~D~V~~g 346 (399)
++++.|.+|+|.+-
T Consensus 296 ~~i~~ga~d~v~~k 309 (426)
T 4e4f_A 296 QLIEEQLIDYIRTT 309 (426)
T ss_dssp HHHHTTCCSEECCC
T ss_pred HHHHcCCCCEEEeC
Confidence 99999999999763
No 97
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.95 E-value=9.3e-09 Score=102.21 Aligned_cols=132 Identities=10% Similarity=0.084 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.|+|+.|+ + .+--.+++++||+++|++ +|.|+.+.
T Consensus 147 e~~~~~a~~~~~~G~~~iKiK~G~---------------------~----~~~d~~~v~avR~a~g~~~~l~vDan~--- 198 (378)
T 3eez_A 147 EETRAVIDRYRQRGYVAHSVKIGG---------------------D----VERDIARIRDVEDIREPGEIVLYDVNR--- 198 (378)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHTTSCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHhCCCCEEEeccCC---------------------C----HHHHHHHHHHHHHHcCCCceEEEECCC---
Confidence 456778888899999999999765 1 234588999999999987 68887764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.++ |++ +|. +.++..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i-~iE--qP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~ 261 (378)
T 3eez_A 199 ------GWTRQQALRVMRATEDLHV-MFE--QPG--------ETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLA 261 (378)
T ss_dssp ------CCCHHHHHHHHHHTGGGTC-CEE--CCS--------SSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHhccCCe-EEe--cCC--------CCHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC
Confidence 2356789999999999999 887 431 14567788999999999999998 89999999999999
Q ss_pred cEEEechHHhhCCcHHHHH
Q 015862 341 DLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 341 D~V~~gR~~iadPdl~~k~ 359 (399)
|+|.+-...+.-+.-..|+
T Consensus 262 d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 262 EVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp SEEEEEHHHHTSHHHHHHH
T ss_pred CEEEeCchhcCCHHHHHHH
Confidence 9999998888777554444
No 98
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.94 E-value=1.4e-08 Score=99.98 Aligned_cols=129 Identities=16% Similarity=0.241 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||..++|+.|.. .+--.+++++||+++|++ .|.++.|.
T Consensus 141 ~~~~~~a~~~~~~G~~~~K~K~g~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDan~--- 192 (354)
T 3jva_A 141 NVMAQKAVEKVKLGFDTLKIKVGTG-------------------------IEADIARVKAIREAVGFDIKLRLDANQ--- 192 (354)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCCC-------------------------HHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 4457778888899999999997651 123489999999999987 68887764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 193 ------~~~~~~a~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~ 258 (354)
T 3jva_A 193 ------AWTPKDAVKAIQALADYQIELVE--QPV------KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTV 258 (354)
T ss_dssp ------CSCHHHHHHHHHHTTTSCEEEEE--CCS------CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999998 442 1224567888999999999999998 89999999999999
Q ss_pred cEEEechHHhhCC
Q 015862 341 DLVVYGRLFLANP 353 (399)
Q Consensus 341 D~V~~gR~~iadP 353 (399)
|+|.+--..+.-.
T Consensus 259 d~v~~k~~~~GGi 271 (354)
T 3jva_A 259 DVINIKLMKCGGI 271 (354)
T ss_dssp SEEEECHHHHTSH
T ss_pred CEEEECchhcCCH
Confidence 9999876655444
No 99
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.94 E-value=1.1e-08 Score=102.64 Aligned_cols=131 Identities=14% Similarity=0.178 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.|+| .|..- ..+ -......+-.+++|++||+++|++ +|.|+.+.
T Consensus 127 e~~~~~a~~~~~~G~~~iKl-~G~~~--~~~-------------~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~--- 187 (405)
T 3rr1_A 127 ADVIAGMKALQAGGFDHFKL-NGCEE--MGI-------------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG--- 187 (405)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ESCCS--SSC-------------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS---
T ss_pred HHHHHHHHHHHHcCCCEEEE-ecCCc--ccc-------------cccchhHHHHHHHHHHHHHHhCCCceEEEECCC---
Confidence 45677888889999999999 43310 000 011233556789999999999987 68887764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 188 ------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~ 253 (405)
T 3rr1_A 188 ------RVSAPMAKVLIKELEPYRPLFIE--EPV------LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGV 253 (405)
T ss_dssp ------CBCHHHHHHHHHHHGGGCCSCEE--CSS------CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCC
Confidence 33578899999999999999988 442 1235677888999999999999998 89999999999999
Q ss_pred cEEEec
Q 015862 341 DLVVYG 346 (399)
Q Consensus 341 D~V~~g 346 (399)
|+|.+-
T Consensus 254 d~v~~d 259 (405)
T 3rr1_A 254 SILQPD 259 (405)
T ss_dssp SEECCB
T ss_pred CeEEEC
Confidence 999874
No 100
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.91 E-value=5.7e-10 Score=104.35 Aligned_cols=88 Identities=17% Similarity=0.078 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
+..++++.+++.|++++.++......... .+.++.++.+++.+++||+++||+ |++++.++++.| ||.|++||+++.
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~G-ad~v~vg~al~~ 234 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVE 234 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCcC-CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcC-CcHhhccHHHHc
Confidence 45678899999999999876543221111 235677888999999999999999 799999999998 999999999999
Q ss_pred CCcHHHHHHhC
Q 015862 352 NPDLPRRFELN 362 (399)
Q Consensus 352 dPdl~~k~~~g 362 (399)
+|++++++++.
T Consensus 235 ~p~~~~~~~~~ 245 (247)
T 3tdn_A 235 NPSLITQIAQT 245 (247)
T ss_dssp -----------
T ss_pred CcHHHHHHHHh
Confidence 99999998763
No 101
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.91 E-value=1.1e-07 Score=93.77 Aligned_cols=137 Identities=15% Similarity=0.097 Sum_probs=89.2
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
++.+.+..+|+|+++||.-. ++...+|. |.. ..+-.++.|++||+.++ -||.+|.-.+
T Consensus 159 ~~~~~ve~~~adal~ihln~---~qe~~~p~---------Gd~--~~~~~~~~I~~l~~~~~-~PVivK~vg~------- 216 (365)
T 3sr7_A 159 AGLQAVRDLQPLFLQVHINL---MQELLMPE---------GER--EFRSWKKHLSDYAKKLQ-LPFILKEVGF------- 216 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECH---HHHHTSSS---------SCC--CCHHHHHHHHHHHHHCC-SCEEEEECSS-------
T ss_pred HHHHHHHhcCCCEEEEeccc---cccccCCC---------CCC--cHHHHHHHHHHHHHhhC-CCEEEEECCC-------
Confidence 34444556899999999764 23444442 111 12236799999999874 4899995332
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCC--C-ccccc------------ccCCCchhhHHHHhhc-CCcEEEeCCC-CHH
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEP--R-MKTRE------------EKSECPHSLLPMRKAF-KGTFLVAGGY-DRE 329 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~-~~~~~------------~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~ 329 (399)
..+. +.++.+.++|+|+|.++.. + +.+.. ...+....+..++... ++||++.||+ +..
T Consensus 217 -g~s~----e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~ 291 (365)
T 3sr7_A 217 -GMDV----KTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPL 291 (365)
T ss_dssp -CCCH----HHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHH
T ss_pred -CCCH----HHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHH
Confidence 2233 3577788999999998543 1 10000 0111112334444332 5899999999 999
Q ss_pred HHHHHHHcCCCcEEEechHHhh
Q 015862 330 DGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 330 ~a~~~L~~G~~D~V~~gR~~ia 351 (399)
++.++|.-| ||+|++||+++.
T Consensus 292 Dv~KaLalG-AdaV~ig~~~l~ 312 (365)
T 3sr7_A 292 DIIKALVLG-AKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHHHHT-CSEEEESHHHHH
T ss_pred HHHHHHHcC-CCEEEECHHHHH
Confidence 999999999 999999999985
No 102
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.90 E-value=3e-08 Score=100.45 Aligned_cols=151 Identities=12% Similarity=0.093 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccc----h--hhhhccc--------Ccc--cCCCCCCCCchhhhhHHHHHHHHHHHHH
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHG----Y--LIDQFLK--------DQV--NDRTDQYGGSLENRCRFALEIVEAVSNE 246 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~G----y--Ll~qFlS--------p~~--N~R~D~yGGslenR~r~~~eii~avR~~ 246 (399)
+++++.|+.+++.||..++|+.|.. | .....++ +.. +.+.....=..+...+..+++|++||++
T Consensus 157 e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a 236 (440)
T 3t6c_A 157 VEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLRNK 236 (440)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 4567778888899999999997631 0 0000000 000 0000000001222356789999999999
Q ss_pred hCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC
Q 015862 247 IGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG 325 (399)
Q Consensus 247 vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 325 (399)
+|++ .|.|+.|. ..+.++++++++.|++.|++||+ +|. .+...+..+.|++.+++||++.+.
T Consensus 237 ~G~d~~L~vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~ 299 (440)
T 3t6c_A 237 LGFSVELLHDAHE---------RITPINAIHMAKALEPYQLFFLE--DPV------APENTEWLKMLRQQSSTPIAMGEL 299 (440)
T ss_dssp HCSSSEEEEECTT---------CSCHHHHHHHHHHTGGGCCSEEE--CSS------CGGGGGGHHHHHHHCCSCEEECTT
T ss_pred cCCCCeEEEECCC---------CCCHHHHHHHHHHhhhcCCCEEE--CCC------ChhhHHHHHHHHhhcCCCEEeCcc
Confidence 9988 68888875 33578899999999999999998 442 122456788899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHh
Q 015862 326 Y-DREDGNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 326 i-t~~~a~~~L~~G~~D~V~~gR~~i 350 (399)
+ ++++++++++.+.+|+|.+--.-+
T Consensus 300 ~~~~~~~~~~i~~~a~d~v~~k~~~~ 325 (440)
T 3t6c_A 300 FVNVNEWKPLIDNKLIDYIRCHISSI 325 (440)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCGGGG
T ss_pred cCCHHHHHHHHHcCCccceeechhhh
Confidence 8 899999999999999988754443
No 103
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.88 E-value=4.2e-08 Score=96.98 Aligned_cols=106 Identities=24% Similarity=0.221 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeC--CCccc-----c---------
Q 015862 236 ALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVE--PRMKT-----R--------- 299 (399)
Q Consensus 236 ~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~--~~~~~-----~--------- 299 (399)
..+.|++||+.++ -||.+|.-.+ ..+. +.++.++++|+|+|.|+. ++.+. .
T Consensus 175 ~~~~i~~i~~~~~-vPVivK~vG~--------g~s~----~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~ 241 (368)
T 3vkj_A 175 ALEKLRDISKELS-VPIIVKESGN--------GISM----ETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKA 241 (368)
T ss_dssp HHHHHHHHHTTCS-SCEEEECSSS--------CCCH----HHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHHcC-CCEEEEeCCC--------CCCH----HHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccch
Confidence 5789999999874 3899996321 2222 357788899999999853 21000 0
Q ss_pred --cc-----cCCCchhhHHHHhhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh----CCcH
Q 015862 300 --EE-----KSECPHSLLPMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA----NPDL 355 (399)
Q Consensus 300 --~~-----~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia----dPdl 355 (399)
+. ..+....+..++++++ +|||++||+ ++.++.++|..| ||+|++||+++. .|+.
T Consensus 242 ~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG-A~~v~ig~~~l~~~~~G~~~ 309 (368)
T 3vkj_A 242 ESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG-ADIAGMALPVLKSAIEGKES 309 (368)
T ss_dssp HHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHHHHCHHH
T ss_pred hhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHHHHhcChHH
Confidence 00 1111234567888885 999999999 999999999998 999999999984 6653
No 104
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.88 E-value=2.8e-08 Score=98.39 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||..++|+.|.. .+--.+++++||+++|++ .|.|+.|.
T Consensus 142 e~~~~~a~~~~~~G~~~~K~KvG~~-------------------------~~~d~~~v~avR~~~g~~~~l~vDaN~--- 193 (368)
T 3q45_A 142 HKMAADAVQIKKNGFEIIKVKVGGS-------------------------KELDVERIRMIREAAGDSITLRIDANQ--- 193 (368)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCC-------------------------HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 4567778888899999999997641 123478999999999987 57877654
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.|++||+ +|. .....+..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 194 ------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (368)
T 3q45_A 194 ------GWSVETAIETLTLLEPYNIQHCE--EPV------SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQAC 259 (368)
T ss_dssp ------CBCHHHHHHHHHHHGGGCCSCEE--CCB------CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCChHHHHHHHHHHhhcCCCEEE--CCC------ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999998 442 1224567888999999999999998 89999999999999
Q ss_pred cEEEechH
Q 015862 341 DLVVYGRL 348 (399)
Q Consensus 341 D~V~~gR~ 348 (399)
|+|.+--.
T Consensus 260 d~v~~k~~ 267 (368)
T 3q45_A 260 DSFNLKLS 267 (368)
T ss_dssp SEEEECTT
T ss_pred CeEEechh
Confidence 99987543
No 105
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.88 E-value=2.7e-08 Score=99.37 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=101.3
Q ss_pred HHHHHHH-HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAA-RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA-~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.| +.+++.||+.++|+.|... .. ...+ .+--++++++||+++|++ +|.|+.|.
T Consensus 141 e~~~~~a~~~~~~~G~~~~KlKvG~~~-----------~~---~~~~----~~~d~~~v~avR~a~g~~~~l~vDaN~-- 200 (393)
T 4dwd_A 141 DEVVREVARRVEAEQPAAVKIRWDGDR-----------TR---CDVD----IPGDIAKARAVRELLGPDAVIGFDANN-- 200 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCCT-----------TC---CSCC----HHHHHHHHHHHHHHHCTTCCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCC-----------cc---cccC----HHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 5567777 7888899999999987621 00 0112 345688999999999988 68888775
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+...+..+.+++.+++||++.+.+ ++++++++|+.|
T Consensus 201 -------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~- 264 (393)
T 4dwd_A 201 -------GYSVGGAIRVGRALEDLGYSWFE--EPV------QHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG- 264 (393)
T ss_dssp -------CCCHHHHHHHHHHHHHTTCSEEE--CCS------CTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-
Confidence 33578899999999999999998 442 1224667888999999999999998 899999999999
Q ss_pred CcEEEech
Q 015862 340 ADLVVYGR 347 (399)
Q Consensus 340 ~D~V~~gR 347 (399)
+|+|.+--
T Consensus 265 ~d~v~~k~ 272 (393)
T 4dwd_A 265 VRMVQPDI 272 (393)
T ss_dssp CCEECCCT
T ss_pred CCEEEeCc
Confidence 99998743
No 106
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.87 E-value=3.2e-08 Score=98.52 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
++.++.|+.+.+. ||..++|+.|.. + .+--++++++||+++|++ .|.|+.+.
T Consensus 150 ~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDan~-- 203 (383)
T 3i4k_A 150 DVAVAEIEERIEEFGNRSFKLKMGAG--------------------D----PAEDTRRVAELAREVGDRVSLRIDINA-- 203 (383)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSS--------------------C----HHHHHHHHHHHHHTTTTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCcEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 3456667777776 999999997651 1 234478999999999987 68888764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 204 -------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 268 (383)
T 3i4k_A 204 -------RWDRRTALHYLPILAEAGVELFE--QPT------PADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQA 268 (383)
T ss_dssp -------CSCHHHHHHHHHHHHHTTCCEEE--SCS------CTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCC
Confidence 33578899999999999999998 442 1234567888999999999999998 8999999999999
Q ss_pred CcEEEechHHhh
Q 015862 340 ADLVVYGRLFLA 351 (399)
Q Consensus 340 ~D~V~~gR~~ia 351 (399)
+|+|.+--..+.
T Consensus 269 ~d~v~~k~~~~G 280 (383)
T 3i4k_A 269 ADVIALKTTKHG 280 (383)
T ss_dssp CSEEEECTTTTT
T ss_pred CCEEEEcccccC
Confidence 999998654433
No 107
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.84 E-value=2.6e-08 Score=98.82 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++. ||..++|+.+.. + .+--.+++++||+++|++ +|.|+.+.
T Consensus 153 ~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~-- 206 (372)
T 3tj4_A 153 EDLLAGSARAVEEDGFTRLKIKVGHD--------------------D----PNIDIARLTAVRERVDSAVRIAIDGNG-- 206 (372)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCCS--------------------S----HHHHHHHHHHHHHHSCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHccCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHHcCCCCcEEeeCCC--
Confidence 4456677888888 999999997641 1 123488999999999987 68887764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+...+..+.+++.+++||++.+.+ ++++++++++.+.
T Consensus 207 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 271 (372)
T 3tj4_A 207 -------KWDLPTCQRFCAAAKDLDIYWFE--EPL------WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGA 271 (372)
T ss_dssp -------CCCHHHHHHHHHHTTTSCEEEEE--SCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhcCCCEEE--CCC------CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCC
Confidence 33578899999999999999988 442 1234667888999999999999998 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 272 ~d~v~~ 277 (372)
T 3tj4_A 272 VAYVQP 277 (372)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999887
No 108
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=98.84 E-value=3.8e-08 Score=98.51 Aligned_cols=131 Identities=15% Similarity=0.186 Sum_probs=99.6
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCch-hhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSL-ENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYME 264 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGsl-enR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~ 264 (399)
+.|+.+++.||+.++|+.+...-.. .++|.+ ....+..++++++||+++|++ .|.++.|.
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~~------------~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~------ 219 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAEK------------TRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHS------ 219 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHH------------HTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTT------
T ss_pred HHHHHHHHhCCCEEEEcCCCccccc------------cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC------
Confidence 3445678899999999976310000 011211 223678899999999999977 68888774
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++|+.|.+|+|
T Consensus 220 ---~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v 288 (400)
T 4dxk_A 220 ---MWQLLPAMQIAKALTPYQTFWHE--DPI------KMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVV 288 (400)
T ss_dssp ---CBCHHHHHHHHHHTGGGCCSEEE--CCB------CTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEE
T ss_pred ---CCCHHHHHHHHHHHhhcCCCEEE--cCC------CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 33678899999999999999998 442 1235667888999999999999998 89999999999999998
Q ss_pred Eec
Q 015862 344 VYG 346 (399)
Q Consensus 344 ~~g 346 (399)
.+-
T Consensus 289 ~~d 291 (400)
T 4dxk_A 289 MLD 291 (400)
T ss_dssp EEC
T ss_pred EeC
Confidence 873
No 109
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.83 E-value=1.7e-07 Score=88.59 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe-CCCcccccccCCCchhhHHHHh
Q 015862 237 LEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV-EPRMKTREEKSECPHSLLPMRK 314 (399)
Q Consensus 237 ~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~-~~~~~~~~~~~~~~~~~~~ir~ 314 (399)
.++++++|+.+++. .++. +.. . +.+ .++.+++.|.||| ++ .+..+.. ......+.++.+++
T Consensus 113 ~~~~~~a~~~~~~g~~vi~-~~~---------~-~~~----~a~~~~~~gad~v-~~~~~~~Gt~-~~~~~~~~l~~i~~ 175 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLP-YTS---------D-DVV----LARKLEELGVHAI-MPGASPIGSG-QGILNPLNLSFIIE 175 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEE-EEC---------S-CHH----HHHHHHHHTCSCB-EECSSSTTCC-CCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-EcC---------C-CHH----HHHHHHHhCCCEE-EECCcccCCC-CCCCCHHHHHHHHh
Confidence 57888899888765 3332 222 1 122 4566778899998 43 2222111 11123567888999
Q ss_pred hcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcH
Q 015862 315 AFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 315 ~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl 355 (399)
..++||++.||| |++++.++++.| +|.|.+|++++..++.
T Consensus 176 ~~~iPviv~gGI~t~eda~~~~~~G-AdgViVGSAi~~a~dp 216 (264)
T 1xm3_A 176 QAKVPVIVDAGIGSPKDAAYAMELG-ADGVLLNTAVSGADDP 216 (264)
T ss_dssp HCSSCBEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTSSSH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEEcHHHhCCCCH
Confidence 889999999999 799999999998 9999999999965543
No 110
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.81 E-value=5.6e-08 Score=96.77 Aligned_cols=123 Identities=19% Similarity=0.258 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++. ||..++|+.|.. + .+--.+++++||+++|++ .|.|+.|.
T Consensus 169 e~~~~~a~~~~~~~G~~~~KlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~-- 222 (383)
T 3toy_A 169 RDDERTLRTACDEHGFRAIKSKGGHG--------------------D----LATDEAMIKGLRALLGPDIALMLDFNQ-- 222 (383)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHccCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEeCCC--
Confidence 4567778888898 999999997641 1 233478999999999987 68887764
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+...+..+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 223 -------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 287 (383)
T 3toy_A 223 -------SLDPAEATRRIARLADYDLTWIE--EPV------PQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGA 287 (383)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999988 442 1224567888999999999999998 8999999999999
Q ss_pred CcEEEec
Q 015862 340 ADLVVYG 346 (399)
Q Consensus 340 ~D~V~~g 346 (399)
+|+|.+-
T Consensus 288 ~d~v~ik 294 (383)
T 3toy_A 288 SDFIMPD 294 (383)
T ss_dssp CSEECCC
T ss_pred CCEEEeC
Confidence 9998763
No 111
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.81 E-value=4.3e-08 Score=97.03 Aligned_cols=123 Identities=12% Similarity=0.141 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++. ||..++|+.|.. | + +--.+++++||+++|++ .|.++.+.
T Consensus 141 ~~~~~~a~~~~~~~G~~~~K~K~g~~--------~-------------~---~~d~~~v~avR~a~g~~~~l~vDan~-- 194 (367)
T 3dg3_A 141 VKMVAEAERIRETYGINTFKVKVGRR--------P-------------V---QLDTAVVRALRERFGDAIELYVDGNR-- 194 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECCCS--------S-------------T---HHHHHHHHHHHHHHGGGSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCccEEEEeeCCC--------h-------------h---hhHHHHHHHHHHHhCCCCEEEEECCC--
Confidence 4567778888888 999999997641 1 0 12378999999999987 57776654
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.|++|++ +|. .+...+..+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 195 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 259 (367)
T 3dg3_A 195 -------GWSAAESLRAMREMADLDLLFAE--ELC------PADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGS 259 (367)
T ss_dssp -------CSCHHHHHHHHHHTTTSCCSCEE--SCS------CTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTS
T ss_pred -------CCCHHHHHHHHHHHHHhCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999988 442 1224567788999999999999998 8999999999999
Q ss_pred CcEEEec
Q 015862 340 ADLVVYG 346 (399)
Q Consensus 340 ~D~V~~g 346 (399)
+|+|.+=
T Consensus 260 ~d~v~~k 266 (367)
T 3dg3_A 260 ATAISIK 266 (367)
T ss_dssp CSEEEEC
T ss_pred CCEEEee
Confidence 9999873
No 112
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.81 E-value=1.5e-08 Score=94.12 Aligned_cols=86 Identities=12% Similarity=0.033 Sum_probs=70.1
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHc---CCCcEEEechHH
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAE---GRADLVVYGRLF 349 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~---G~~D~V~~gR~~ 349 (399)
..++++.+++.|++.|.++......... ...++.++.+++.+++||+++||+ +++++.++++. | +|.|++||++
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-ad~v~vG~al 228 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLG-GPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRG-VEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTS-CCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHH
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccC-CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCC-CCEEEEcHHH
Confidence 4667888889999988877654322222 236678888999899999999999 79999999988 6 9999999999
Q ss_pred hhCCcHHHHHHh
Q 015862 350 LANPDLPRRFEL 361 (399)
Q Consensus 350 iadPdl~~k~~~ 361 (399)
+.+|+++.++.+
T Consensus 229 ~~~~~~~~~~~~ 240 (244)
T 2y88_A 229 YARRFTLPQALA 240 (244)
T ss_dssp HTTSSCHHHHHH
T ss_pred HCCCcCHHHHHH
Confidence 999998887764
No 113
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.80 E-value=3.8e-08 Score=90.24 Aligned_cols=132 Identities=11% Similarity=0.091 Sum_probs=91.0
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
+..+.++|+|.|.||...- .+.+ ..+.++++++|+.++..++++.+.
T Consensus 81 i~~~~~~Gad~v~l~~~~~------------~~p~----------~~~~~~i~~~~~~~~~~~v~~~~~----------- 127 (223)
T 1y0e_A 81 VDELIESQCEVIALDATLQ------------QRPK----------ETLDELVSYIRTHAPNVEIMADIA----------- 127 (223)
T ss_dssp HHHHHHHTCSEEEEECSCS------------CCSS----------SCHHHHHHHHHHHCTTSEEEEECS-----------
T ss_pred HHHHHhCCCCEEEEeeecc------------cCcc----------cCHHHHHHHHHHhCCCceEEecCC-----------
Confidence 3446789999999986431 1111 124689999999984335665332
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccc----cCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREE----KSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~----~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
+.++ +..+++.|+|+|.+..+.+..... ..+.++.++.+++.+++||++.||+ |++++.++++.| +|+|
T Consensus 128 -t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~G-ad~v 201 (223)
T 1y0e_A 128 -TVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLG-VHCS 201 (223)
T ss_dssp -SHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTT-CSEE
T ss_pred -CHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcC-CCEE
Confidence 2333 344778899999765432221111 1223456788888899999999999 999999999998 9999
Q ss_pred EechHHhhCCcHHHHHH
Q 015862 344 VYGRLFLANPDLPRRFE 360 (399)
Q Consensus 344 ~~gR~~iadPdl~~k~~ 360 (399)
++||+++. |+++.+..
T Consensus 202 ~vG~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 202 VVGGAITR-PKEITKRF 217 (223)
T ss_dssp EECHHHHC-HHHHHHHH
T ss_pred EEChHHcC-cHHHHHHH
Confidence 99999665 87766543
No 114
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.80 E-value=6.1e-08 Score=96.76 Aligned_cols=129 Identities=17% Similarity=0.166 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceE-EEecCC
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVG-IRLSPF 259 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~-vrls~~ 259 (399)
.+++++.|+.+++.||+.++|+.|+. .+--.+++++||+++|++ .|. |+.+.
T Consensus 143 ~e~~~~~a~~~~~~G~~~~KiKvG~~-------------------------~~~d~~~v~avR~a~g~~~~l~~vDan~- 196 (391)
T 3gd6_A 143 VESNLDVVRQKLEQGFDVFRLYVGKN-------------------------LDADEEFLSRVKEEFGSRVRIKSYDFSH- 196 (391)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSC-------------------------HHHHHHHHHHHHHHHGGGCEEEEEECTT-
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCC-------------------------HHHHHHHHHHHHHHcCCCCcEEEecCCC-
Confidence 35678888999999999999997651 233589999999999987 577 77664
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCc--eEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGI--LYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gv--d~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
..+.++++++++.|++.|+ +||+ +|. .....+..+.+++.+++|| .+.+ ++++++++++
T Consensus 197 --------~~~~~~A~~~~~~l~~~~i~~~~iE--qP~------~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~ 258 (391)
T 3gd6_A 197 --------LLNWKDAHRAIKRLTKYDLGLEMIE--SPA------PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIK 258 (391)
T ss_dssp --------CSCHHHHHHHHHHHTTCCSSCCEEE--CCS------CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHH
T ss_pred --------CcCHHHHHHHHHHHHhcCCCcceec--CCC------ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHH
Confidence 3357889999999999999 9988 442 1224667888999999999 6677 8999999999
Q ss_pred cCCCcEEEechHHhhCCc
Q 015862 337 EGRADLVVYGRLFLANPD 354 (399)
Q Consensus 337 ~G~~D~V~~gR~~iadPd 354 (399)
.+.+|+|.+--.-+.-..
T Consensus 259 ~~~~d~v~~k~~~~GGit 276 (391)
T 3gd6_A 259 KDAIDIFNISPVFIGGLT 276 (391)
T ss_dssp HTCCSEEEECHHHHTSHH
T ss_pred cCCCCEEEECchhcCCHH
Confidence 999999999877765553
No 115
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=98.79 E-value=7.4e-08 Score=97.03 Aligned_cols=144 Identities=10% Similarity=0.104 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEcccc-chhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAH-GYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~-GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+++++.||..++++.+. ++-..++..+....+. . .....+..+..++.+++||+++|++ .|.+..+.
T Consensus 155 ~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~-- 230 (421)
T 4hnl_A 155 DDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISG-S-YFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHE-- 230 (421)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSS-E-ECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred HHHHHHHHHHHHhhHHHHhhccccccCCchhcccccccccc-c-cccchhHHHHHHHHHHHHHHHhCCCceEeccccc--
Confidence 456778888999999999999875 3333333332211110 0 0123445677899999999999987 57777664
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++++.|++ +|. ....++..+.+++.+++||++...+ +++++.++|+.+.
T Consensus 231 -------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a 295 (421)
T 4hnl_A 231 -------RLHPNQAIQFAKAAEPYQLFFLE--DIL------PPDQSHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQ 295 (421)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTC
T ss_pred -------cCCHHHHHHHHHHhhhhhhcccc--cCC------cccchHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCC
Confidence 33678899999999999999988 542 1234667888999999999998888 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 296 ~d~v~~ 301 (421)
T 4hnl_A 296 IDFMRA 301 (421)
T ss_dssp CSEECC
T ss_pred ceEEEe
Confidence 998865
No 116
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.79 E-value=7.6e-08 Score=96.04 Aligned_cols=125 Identities=18% Similarity=0.294 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHh---CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecC
Q 015862 183 NDFRLAARNAIEA---GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSP 258 (399)
Q Consensus 183 ~~f~~aA~~a~~a---GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~ 258 (399)
+++++.|+.+++. ||..++|+.|.. + .+--.++|++||+++|++ .|.|+.|.
T Consensus 173 e~~~~~a~~~~~~~~~G~~~iKlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~ 228 (390)
T 3ugv_A 173 EVAAEAVELKAEGQGTGFKGLKLRMGRD--------------------D----PAVDIETAEAVWDAVGRDTALMVDFNQ 228 (390)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred HHHHHHHHHHHHhhhCCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4567778888889 999999997641 1 233478999999999987 68887764
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHc
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
..+.++++++++.|++.|++||+ +|. .+...+..+.+++.+++||++.+.+ +++++.++++.
T Consensus 229 ---------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 291 (390)
T 3ugv_A 229 ---------GLDMAEAMHRTRQIDDLGLEWIE--EPV------VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQA 291 (390)
T ss_dssp ---------CCCHHHHHHHHHHHTTSCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred ---------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHc
Confidence 33578899999999999999998 442 1224567788999999999999998 89999999999
Q ss_pred CCCcEEEechH
Q 015862 338 GRADLVVYGRL 348 (399)
Q Consensus 338 G~~D~V~~gR~ 348 (399)
|.+|+|.+--.
T Consensus 292 ~a~d~v~ik~~ 302 (390)
T 3ugv_A 292 GACDLVMPDFM 302 (390)
T ss_dssp TCCSEECCBHH
T ss_pred CCCCEEEeCcc
Confidence 99999876433
No 117
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.79 E-value=8.8e-08 Score=96.19 Aligned_cols=131 Identities=11% Similarity=0.206 Sum_probs=98.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCch-hhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSL-ENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGsl-enR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
.+.|+.+++.||+.++|+... +. .++-|+.+ ....+..+++|++||+++|++ +|.|+.|.
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~-~~------------~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~----- 222 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFD-DF------------ASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS----- 222 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTH-HH------------HTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT-----
T ss_pred HHHHHHHHHcCCCEEEECCcc-Cc------------cccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC-----
Confidence 344567788999999996211 00 01112211 123567899999999999987 68888774
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCC-CcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEP-RMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~-~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
..+.++++++++.|++.|++||+ +| . .+...+..+.+++.+++||++.+.+ ++++++++|+.|.+|
T Consensus 223 ----~~~~~~A~~~~~~L~~~~i~~iE--qP~~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d 290 (410)
T 3dip_A 223 ----LWGTHAAARICNALADYGVLWVE--DPIA------KMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAID 290 (410)
T ss_dssp ----CBCHHHHHHHHHHGGGGTCSEEE--CCBS------CTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEE--CCCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 33678899999999999999998 43 1 1124567888999999999999998 899999999999999
Q ss_pred EEEec
Q 015862 342 LVVYG 346 (399)
Q Consensus 342 ~V~~g 346 (399)
+|.+-
T Consensus 291 ~v~~k 295 (410)
T 3dip_A 291 FVMLD 295 (410)
T ss_dssp EEEEC
T ss_pred eEeec
Confidence 99873
No 118
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.77 E-value=2.2e-08 Score=93.44 Aligned_cols=87 Identities=17% Similarity=0.077 Sum_probs=73.8
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
+..++++.+++.|+++|+++....... ....+.+.++.+++.+++||+++|++ |+++++++++.| +|.|.+||.++.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~G-ad~V~ig~~~l~ 113 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVE 113 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEECCSHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCeeehhhHHhh
Confidence 467799999999999999876532211 22345678899999999999999999 899999999998 999999999999
Q ss_pred CCcHHHHHHh
Q 015862 352 NPDLPRRFEL 361 (399)
Q Consensus 352 dPdl~~k~~~ 361 (399)
||+|+.++.+
T Consensus 114 dp~~~~~~~~ 123 (247)
T 3tdn_A 114 NPSLITQIAQ 123 (247)
T ss_dssp CTHHHHHHHH
T ss_pred ChHHHHHHHH
Confidence 9999988875
No 119
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.77 E-value=2.2e-08 Score=102.87 Aligned_cols=131 Identities=18% Similarity=0.137 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
++.+.|+.+.++|+|.|+|+.+|| ..+.+.++|+++|+.++.-+|.+.- .
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g------------------------~~~~~~~~i~~ir~~~p~~~Vi~g~-v----- 280 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHG------------------------HSEGVLQRIRETRAAYPHLEIIGGN-V----- 280 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCT------------------------TSHHHHHHHHHHHHHCTTCCEEEEE-E-----
T ss_pred chHHHHHHHHhccCceEEeccccc------------------------cchHHHHHHHHHHHHCCCceEEEcc-c-----
Confidence 457778888999999999999984 2356789999999998644665521 1
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCC--cccc----cccCCCchhhHHHHhh---cCCcEEEeCCC-CHHHHHH
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPR--MKTR----EEKSECPHSLLPMRKA---FKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~--~~~~----~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~ 333 (399)
.+. +.++.+.++|+|+|.+..+. .... ....+.+..+..+.++ .++|||+.||+ ++.++.+
T Consensus 281 -----~t~----e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k 351 (496)
T 4fxs_A 281 -----ATA----EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK 351 (496)
T ss_dssp -----CSH----HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred -----CcH----HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH
Confidence 112 34677888999999875221 1000 1112334444555553 47999999999 8999999
Q ss_pred HHHcCCCcEEEechHHhhCCc
Q 015862 334 AIAEGRADLVVYGRLFLANPD 354 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPd 354 (399)
+|+.| ||+|++||+|+.-.+
T Consensus 352 ala~G-Ad~V~iGs~f~~t~E 371 (496)
T 4fxs_A 352 AIAAG-ASCVMVGSMFAGTEE 371 (496)
T ss_dssp HHHTT-CSEEEESTTTTTBTT
T ss_pred HHHcC-CCeEEecHHHhcCCC
Confidence 99998 999999999998665
No 120
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.77 E-value=3.4e-08 Score=97.34 Aligned_cols=127 Identities=13% Similarity=0.110 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.++|+.|+ + .+--.+++++||+++|++ .|.++.|.
T Consensus 142 ~~~~~~a~~~~~~G~~~~K~K~G~---------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~--- 193 (356)
T 3ro6_B 142 EETLAEAREHLALGFRVLKVKLCG---------------------D----EEQDFERLRRLHETLAGRAVVRVDPNQ--- 193 (356)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHHHHHTTSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCC---------------------C----HHHHHHHHHHHHHHhCCCCEEEEeCCC---
Confidence 456777888889999999999764 1 234578999999999987 57887764
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC-C
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG-R 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G-~ 339 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+ .
T Consensus 194 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (356)
T 3ro6_B 194 ------SYDRDGLLRLDRLVQELGIEFIE--QPF------PAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAA 259 (356)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCCCEE--CCS------CTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCS
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCc
Confidence 23577899999999999999998 442 1224567788888889999999998 899999999998 9
Q ss_pred CcEEEechHHhh
Q 015862 340 ADLVVYGRLFLA 351 (399)
Q Consensus 340 ~D~V~~gR~~ia 351 (399)
+|+|.+--..+.
T Consensus 260 ~d~v~~k~~~~G 271 (356)
T 3ro6_B 260 CGIFNIKLMKCG 271 (356)
T ss_dssp CSEEEECHHHHC
T ss_pred CCEEEEcccccC
Confidence 999998655443
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.77 E-value=2.7e-08 Score=102.10 Aligned_cols=133 Identities=21% Similarity=0.164 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
++.+.|+.+.++|+|.|+|+.+||+ ...+.+.|+++|+.++.-+|.+.- .
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~------------------------~~~~~~~v~~i~~~~p~~~Vi~g~-v----- 278 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGH------------------------SKGVIERVRWVKQTFPDVQVIGGN-I----- 278 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCS------------------------BHHHHHHHHHHHHHCTTSEEEEEE-E-----
T ss_pred chHHHHHHHhhcccceEEecccCCc------------------------chhHHHHHHHHHHHCCCceEEEee-e-----
Confidence 5677888899999999999999863 246789999999998543665521 1
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCC--Cc-cc---ccccCCCchhhHHHHhhc---CCcEEEeCCC-CHHHHHH
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEP--RM-KT---REEKSECPHSLLPMRKAF---KGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~~-~~---~~~~~~~~~~~~~ir~~~---~~pvi~~Ggi-t~~~a~~ 333 (399)
.+. +.++.+.++|+|+|.+..+ .. .. .....+....+..+.+++ ++|||+.||+ +++++.+
T Consensus 279 -----~t~----e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k 349 (490)
T 4avf_A 279 -----ATA----EAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAK 349 (490)
T ss_dssp -----CSH----HHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHH
T ss_pred -----CcH----HHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHH
Confidence 122 3467788999999987321 11 00 011223444556666644 7999999999 9999999
Q ss_pred HHHcCCCcEEEechHHhhCCcHH
Q 015862 334 AIAEGRADLVVYGRLFLANPDLP 356 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl~ 356 (399)
+|+.| ||+|++|++|+.-.+-+
T Consensus 350 al~~G-Ad~V~vGs~~~~~~Esp 371 (490)
T 4avf_A 350 AMVAG-AYCVMMGSMFAGTEEAP 371 (490)
T ss_dssp HHHHT-CSEEEECTTTTTBTTSS
T ss_pred HHHcC-CCeeeecHHHhcCCCCC
Confidence 99998 99999999998866533
No 122
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.76 E-value=4.3e-08 Score=90.65 Aligned_cols=131 Identities=15% Similarity=0.108 Sum_probs=90.3
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.++|+|.|.+|... +.+.+ | ..+.++++.+|+..+..+|++.++.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~------------~~~~~--~-------~~~~~~i~~i~~~~~~~~v~~~~~t------- 142 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTK------------RDRHD--G-------LDIASFIRQVKEKYPNQLLMADIST------- 142 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCS------------SCCTT--C-------CCHHHHHHHHHHHCTTCEEEEECSS-------
T ss_pred HHHHHHHHHcCCCEEEEcccc------------cCCCC--C-------ccHHHHHHHHHHhCCCCeEEEeCCC-------
Confidence 344566788999999999765 11221 1 1347899999998853356665432
Q ss_pred CCCChHHHHHHHHHhhhhhCceEE--EEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYC--HMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l--~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
.++ +..+.+.|+|+| ++.................++.+++. ++||++.||+ |++++.++++.| +|.
T Consensus 143 -----~~e----a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~G-ad~ 211 (234)
T 1yxy_A 143 -----FDE----GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLG-VAG 211 (234)
T ss_dssp -----HHH----HHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTC-CSE
T ss_pred -----HHH----HHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCC-CCE
Confidence 232 556678899999 44332111100122345667888887 8999999999 699999999998 999
Q ss_pred EEechHHhhCCcHH
Q 015862 343 VVYGRLFLANPDLP 356 (399)
Q Consensus 343 V~~gR~~iadPdl~ 356 (399)
|++||+++. |.+.
T Consensus 212 v~vGsal~~-p~~~ 224 (234)
T 1yxy_A 212 IVVGGAITR-PKEI 224 (234)
T ss_dssp EEECHHHHC-HHHH
T ss_pred EEEchHHhC-hHHH
Confidence 999999987 7543
No 123
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.75 E-value=4.3e-08 Score=97.16 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+++.+.||+.++||.+ | +...+++++||+++ ++ .|.++.+.
T Consensus 150 ~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~--- 198 (375)
T 1r0m_A 150 QATVDLVRRHVEQGYRRIKLKIK----------P-----------------GWDVQPVRATREAF-PDIRLTVDANS--- 198 (375)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhcccEEEEecC----------h-----------------HHHHHHHHHHHHHc-CCCeEEEeCCC---
Confidence 45688899999999999999852 2 22378899999999 66 57777653
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++ +++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 199 ------~~~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 263 (375)
T 1r0m_A 199 ------AYTLAD-AGRLRQLDEYDLTYIE--QPL------AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAG 263 (375)
T ss_dssp ------CCCGGG-HHHHHTTGGGCCSCEE--CCS------CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSC
T ss_pred ------CCCHHH-HHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCC
Confidence 223566 8999999999999998 442 1235677888999999999999998 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 264 d~v~i 268 (375)
T 1r0m_A 264 GVINL 268 (375)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99987
No 124
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.74 E-value=4.2e-08 Score=96.83 Aligned_cols=134 Identities=19% Similarity=0.157 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.+..+.++|+|.|.|+.+||+ .+...+.|+++|+..+.-+|.+---.
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~------------------------~~~~~~~I~~ik~~~p~v~Vi~G~v~------ 158 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGH------------------------SEGVLQRIRETRAAYPHLEIIGGNVA------ 158 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT------------------------SHHHHHHHHHHHHHCTTCEEEEEEEC------
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC------------------------CHHHHHHHHHHHHhcCCCceEeeeeC------
Confidence 356678889999999999988751 24568899999998853355442111
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeC--CC-cccc---cccCCCchhhHHHHh---hcCCcEEEeCCC-CHHHHHHH
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVE--PR-MKTR---EEKSECPHSLLPMRK---AFKGTFLVAGGY-DREDGNKA 334 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~--~~-~~~~---~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 334 (399)
+. +.++.++++|+|+|.+.. +. +... ....+....+..+++ .+++|||+.||+ ++.++.++
T Consensus 159 -----t~----e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~ka 229 (366)
T 4fo4_A 159 -----TA----EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKA 229 (366)
T ss_dssp -----SH----HHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred -----CH----HHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHH
Confidence 22 346677889999999821 11 1100 011223334444544 468999999999 89999999
Q ss_pred HHcCCCcEEEechHHhhCCcHHHH
Q 015862 335 IAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 335 L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
|+.| +|.|++|+.|+..++-+-.
T Consensus 230 la~G-Ad~V~vGs~f~~t~Esp~~ 252 (366)
T 4fo4_A 230 IAAG-ASCVMVGSMFAGTEEAPGE 252 (366)
T ss_dssp HHTT-CSEEEESTTTTTBTTSSSC
T ss_pred HHcC-CCEEEEChHhhcCCCCCch
Confidence 9999 9999999999998875543
No 125
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.73 E-value=6.2e-08 Score=95.80 Aligned_cols=117 Identities=15% Similarity=0.208 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+++++.||+.++||.+ | +...+++++||+++ ++ .|.+..+.
T Consensus 143 ~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~--- 191 (369)
T 2zc8_A 143 EDTLRVVERHLEEGYRRIKLKIK----------P-----------------GWDYEVLKAVREAF-PEATLTADANS--- 191 (369)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhhhheeeeecC----------h-----------------hHHHHHHHHHHHHc-CCCeEEEecCC---
Confidence 55688899999999999999852 2 22378899999999 65 56665543
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++ +++++.|++.+++||+ +|. .+..++..+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 192 ------~~~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 256 (369)
T 2zc8_A 192 ------AYSLAN-LAQLKRLDELRLDYIE--QPL------AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAG 256 (369)
T ss_dssp ------CCCGGG-HHHHHGGGGGCCSCEE--CCS------CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHH-HHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCC
Confidence 224566 8899999999999998 442 1235677888999999999999998 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 257 d~v~i 261 (369)
T 2zc8_A 257 RVFNV 261 (369)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99987
No 126
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.72 E-value=1.9e-07 Score=93.00 Aligned_cols=126 Identities=16% Similarity=0.131 Sum_probs=95.3
Q ss_pred HHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCC
Q 015862 191 NAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 191 ~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~ 269 (399)
...+.||+.++|+.|... ....+++ .+-..+++++||+++|++ .|.++.|. ..
T Consensus 157 ~~~~~Gf~~~K~KvG~~~----------~~d~~~~-------~~~~~~~v~avReavG~d~~l~vDaN~---------~~ 210 (388)
T 3tcs_A 157 LRDTQGFTAFKVRAGAEV----------GRNRDEW-------PGRTEEIIPTMRRELGDDVDLLIDANS---------CY 210 (388)
T ss_dssp HHHHHCCCEEEEECSCTT----------CTTCCSS-------TTHHHHHHHHHHHHHCSSSEEEEECTT---------CC
T ss_pred HHHhcCCCEEEEccCCCc----------ccccccc-------hhHHHHHHHHHHHHhCCCCeEEEeCCC---------Cc
Confidence 345789999999987520 0001111 223578999999999987 68887765 33
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechH
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~ 348 (399)
+.++++++++.|++.++.|++ +|. .....+..+.+++.+++||++.+.+ +++++.++++.+.+|+|.+--.
T Consensus 211 ~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 211 TPDRAIEVGHMLQDHGFCHFE--EPC------PYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred CHHHHHHHHHHHhhcCCeEEE--CCC------CccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 578899999999999999987 442 1224567888999999999999998 8999999999999999887544
Q ss_pred Hh
Q 015862 349 FL 350 (399)
Q Consensus 349 ~i 350 (399)
-+
T Consensus 283 ~~ 284 (388)
T 3tcs_A 283 YL 284 (388)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 127
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.72 E-value=2.4e-07 Score=91.99 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++.++.|+.+++.||..++|+.|. + .+--.+.|++||+++|++ .|.|..|.
T Consensus 144 e~~~~~a~~~~~~Gf~~~KlK~g~---------------------~----~~~d~~~v~avR~a~g~~~~L~vDaN~--- 195 (379)
T 3r0u_A 144 AETIQNIQNGVEANFTAIKVKTGA---------------------D----FNRDIQLLKALDNEFSKNIKFRFDANQ--- 195 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHCCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEeeecCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEeCCC---
Confidence 345677788888999999999753 1 233478999999999977 57776654
Q ss_pred cCCCCCCChHHHHHHHHHhhhh--hCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 262 YMESGDSNPEALGLYMAESLNK--YGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~--~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++ .++.|++ +|. .+...+..+.+++.+++||++.+.+ +++++.++++.|
T Consensus 196 ------~w~~~~A~~~~~~l~~~~~~l~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 261 (379)
T 3r0u_A 196 ------GWNLAQTKQFIEEINKYSLNVEIIE--QPV------KYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ 261 (379)
T ss_dssp ------CCCHHHHHHHHHHHHTSCCCEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT
T ss_pred ------CcCHHHHHHHHHHHhhcCCCcEEEE--CCC------CcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC
Confidence 3357889999999999 7899887 442 1224567888999999999999998 899999999999
Q ss_pred CCcEEEechHH
Q 015862 339 RADLVVYGRLF 349 (399)
Q Consensus 339 ~~D~V~~gR~~ 349 (399)
.+|+|.+--..
T Consensus 262 a~d~v~~k~~~ 272 (379)
T 3r0u_A 262 ACNMINIKLAK 272 (379)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEECccc
Confidence 99998874443
No 128
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=4.8e-07 Score=90.25 Aligned_cols=131 Identities=18% Similarity=0.094 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
.++.+.++|+|.|.+|... + ..+|+++ .+..+-|.++|+.++ -||.++-
T Consensus 170 ~a~~~~~agad~i~i~~~~--~------------~~~~~~~-----~~~~~~i~~l~~~~~-~pvi~gg----------- 218 (393)
T 2qr6_A 170 IAPIVIKAGADLLVIQGTL--I------------SAEHVNT-----GGEALNLKEFIGSLD-VPVIAGG----------- 218 (393)
T ss_dssp HHHHHHHTTCSEEEEECSS--C------------CSSCCCC----------CHHHHHHHCS-SCEEEEC-----------
T ss_pred HHHHHHHCCCCEEEEeCCc--c------------ccccCCC-----cccHHHHHHHHHhcC-CCEEECC-----------
Confidence 4455667899999988321 0 1123321 112334678888874 3666631
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCCCcccc---cccCCCchhhHHHHhh-------cC---CcEEEeCCC-CHHHHHH
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEPRMKTR---EEKSECPHSLLPMRKA-------FK---GTFLVAGGY-DREDGNK 333 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~---~~~~~~~~~~~~ir~~-------~~---~pvi~~Ggi-t~~~a~~ 333 (399)
..+.++ ++.+.+.|+|.|.+..+..... ....+....+..+++. ++ +|||+.||+ +..++.+
T Consensus 219 i~t~e~----a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~k 294 (393)
T 2qr6_A 219 VNDYTT----ALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVK 294 (393)
T ss_dssp CCSHHH----HHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHH
T ss_pred cCCHHH----HHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHH
Confidence 112333 5666789999999954322110 1112334455555555 55 999999999 8999999
Q ss_pred HHHcCCCcEEEechHHhhCCc
Q 015862 334 AIAEGRADLVVYGRLFLANPD 354 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPd 354 (399)
+|..| +|+|++||+++..++
T Consensus 295 alalG-A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 295 AIACG-ADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHT-CSEEEECGGGGGSTT
T ss_pred HHHcC-CCEEEECHHHHcCCC
Confidence 99999 999999999999885
No 129
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.70 E-value=1e-07 Score=93.42 Aligned_cols=102 Identities=20% Similarity=0.099 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH
Q 015862 234 RFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR 313 (399)
Q Consensus 234 r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir 313 (399)
.+.-+.|++||+.++ .||.+|... +. +.++.+++.|+|.|.++.....+....++.++.+.+++
T Consensus 203 ~~~w~~i~~lr~~~~-~PvivK~v~-----------~~----e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~ 266 (352)
T 3sgz_A 203 SFCWNDLSLLQSITR-LPIILKGIL-----------TK----EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVV 266 (352)
T ss_dssp TCCHHHHHHHHHHCC-SCEEEEEEC-----------SH----HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC-CCEEEEecC-----------cH----HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHH
Confidence 456789999999984 389998763 12 34677889999999986532222223334556777888
Q ss_pred hhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 314 KAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 314 ~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
+++ ++|||+.||| +.+++.++|..| ||+|++||+++..
T Consensus 267 ~av~~~ipVia~GGI~~g~Dv~kaLalG-A~aV~iGr~~l~~ 307 (352)
T 3sgz_A 267 AAVKGKIEVYMDGGVRTGTDVLKALALG-ARCIFLGRPILWG 307 (352)
T ss_dssp HHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHH
T ss_pred HHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 888 6999999999 999999999998 9999999999853
No 130
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.70 E-value=7.8e-08 Score=95.48 Aligned_cols=125 Identities=12% Similarity=0.134 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
.++.|+.+++.||..++|+.|.. . .+--.+++++||+++|++ .|.|+.|.
T Consensus 150 ~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~----- 200 (377)
T 3my9_A 150 DLERMRAMVPAGHTVFKMKTGVK--------------------P----HAEELRILETMRGEFGERIDLRLDFNQ----- 200 (377)
T ss_dssp HHHHHHHHTTTTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT-----
T ss_pred HHHHHHHHHHcCCCEEEEccCCC--------------------c----HHHHHHHHHHHHHHhCCCCeEEEeCCC-----
Confidence 34556777788999999997641 1 223478999999999987 68887764
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ +++++.++++.|.+|+
T Consensus 201 ----~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 268 (377)
T 3my9_A 201 ----ALTPFGAMKILRDVDAFRPTFIE--QPV------PRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADA 268 (377)
T ss_dssp ----CCCTTTHHHHHHHHHTTCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSE
T ss_pred ----CcCHHHHHHHHHHHhhcCCCEEE--CCC------CccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCE
Confidence 22346688999999999999988 442 1234677888999999999999998 8999999999999999
Q ss_pred EEechHHh
Q 015862 343 VVYGRLFL 350 (399)
Q Consensus 343 V~~gR~~i 350 (399)
|.+--.-+
T Consensus 269 v~~k~~~~ 276 (377)
T 3my9_A 269 ISVKIMKC 276 (377)
T ss_dssp EECCHHHH
T ss_pred EEeccccc
Confidence 98754443
No 131
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.70 E-value=1.6e-07 Score=94.08 Aligned_cols=125 Identities=8% Similarity=0.087 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.++|+.+ | ..| .++|++||+++|++ .|.|..|.
T Consensus 165 e~~~~~a~~~~~~G~~~iKlKv~----------~----~~d-------------~~~v~avR~a~G~~~~L~vDaN~--- 214 (400)
T 3mwc_A 165 ETLIHQVEESLQEGYRRIKIKIK----------P----GWD-------------VEPLQETRRAVGDHFPLWTDANS--- 214 (400)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECB----------T----TBS-------------HHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeC----------c----chH-------------HHHHHHHHHhcCCCCEEEEeCCC---
Confidence 45677888889999999999962 1 122 78999999999987 68887664
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++ +++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ +++++.++++.+.+
T Consensus 215 ------~w~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 279 (400)
T 3mwc_A 215 ------SFELDQ-WETFKAMDAAKCLFHE--QPL------HYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGIS 279 (400)
T ss_dssp ------CCCGGG-HHHHHHHGGGCCSCEE--SCS------CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHH-HHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCC
Confidence 223455 7899999999999988 442 1224667888999999999999998 89999999999999
Q ss_pred cEEEechHHhhC
Q 015862 341 DLVVYGRLFLAN 352 (399)
Q Consensus 341 D~V~~gR~~iad 352 (399)
|+|.+--.-+.-
T Consensus 280 d~v~~k~~~~GG 291 (400)
T 3mwc_A 280 NIWNIKIQRVGG 291 (400)
T ss_dssp SEEEECHHHHTS
T ss_pred CEEEEcchhhCC
Confidence 999886554433
No 132
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.69 E-value=8.6e-08 Score=94.93 Aligned_cols=121 Identities=12% Similarity=0.111 Sum_probs=93.6
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~ 264 (399)
.++++...+.||..++|+.|.. + .+--++++++||+++|++ .|.++.+.
T Consensus 148 ~~~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~------ 197 (370)
T 1chr_A 148 DSAVEMIERRRHNRFKVKLGFR--------------------S----PQDDLIHMEALSNSLGSKAYLRVDVNQ------ 197 (370)
T ss_dssp HHHHHHHHTTCCCEEEEECSSS--------------------C----SHHHHHHHHHHHHHSSTTCCEEEECTT------
T ss_pred HHHHHHHHHCCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC------
Confidence 3344444448999999997651 1 123478999999999987 68887764
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
..+.++++++++.|++.|++||+ +|. ....++..+.+++.+++||++.+.+ +++++.++++.+.+|+|
T Consensus 198 ---~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v 266 (370)
T 1chr_A 198 ---AWDEQVASVYIPELEALGVELIE--QPV------GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVF 266 (370)
T ss_dssp ---CCCTTHHHHHTHHHHTTTEEEEE--CCS------CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEE
T ss_pred ---CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 22356789999999999999988 442 1234567888999999999999998 89999999999999999
Q ss_pred Eech
Q 015862 344 VYGR 347 (399)
Q Consensus 344 ~~gR 347 (399)
.+--
T Consensus 267 ~~k~ 270 (370)
T 1chr_A 267 SLKL 270 (370)
T ss_dssp EECT
T ss_pred EECc
Confidence 8743
No 133
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.61 E-value=7e-07 Score=90.39 Aligned_cols=122 Identities=10% Similarity=0.121 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||+.++|+.|. . .+--.+.|++||+++|++ .|.|..|.
T Consensus 203 e~~~~~a~~~~~~Gf~~~KlKvG~---------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~--- 254 (441)
T 4a35_A 203 DTLKQLCAQALKDGWTRFKVKVGA---------------------D----LQDDMRRCQIIRDMIGPEKTLMMDANQ--- 254 (441)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 566788888899999999999753 1 223477899999999987 57777665
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh---cCCcEEEeCCC-CHHHHHHHHHc
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA---FKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
..+.++++++++.|++.++.|++ +|. .+......+.++++ +++||++...+ +..++.++++.
T Consensus 255 ------~~~~~~A~~~~~~L~~~~~~~iE--eP~------~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~ 320 (441)
T 4a35_A 255 ------RWDVPEAVEWMSKLAKFKPLWIE--EPT------SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA 320 (441)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHhhcccCccEEe--CCC------CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc
Confidence 33577899999999999999988 552 12245566778887 78999998888 89999999999
Q ss_pred CCCcEEEec
Q 015862 338 GRADLVVYG 346 (399)
Q Consensus 338 G~~D~V~~g 346 (399)
+.+|+|.+-
T Consensus 321 ~a~div~~d 329 (441)
T 4a35_A 321 KALQFLQID 329 (441)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEEEC
Confidence 999998763
No 134
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.61 E-value=3.1e-07 Score=85.35 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=65.2
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHc---CCCcEEEechHH
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAE---GRADLVVYGRLF 349 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~---G~~D~V~~gR~~ 349 (399)
..++++.+++.|++.|.++........ ....++.++++++.+++||++.||+ +++++.++++. | +|.|++||++
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~~-~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-adgv~vG~al 225 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGTL-QGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAG-VEGAIVGKAL 225 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC--------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHH
T ss_pred HHHHHHHHHhCCCCEEEEeccCccccc-CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCC-CceeeeeHHH
Confidence 456778888899998877653322111 1235678899999999999999999 79999999998 6 9999999999
Q ss_pred hhCCcHHHHHH
Q 015862 350 LANPDLPRRFE 360 (399)
Q Consensus 350 iadPdl~~k~~ 360 (399)
+.+|+-+.++.
T Consensus 226 ~~~~~~~~~~~ 236 (244)
T 1vzw_A 226 YAKAFTLEEAL 236 (244)
T ss_dssp HTTSSCHHHHH
T ss_pred HcCCCCHHHHH
Confidence 99996665544
No 135
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.58 E-value=9.3e-07 Score=88.14 Aligned_cols=124 Identities=14% Similarity=0.160 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC-CC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG-AD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg-~~-~v~vrls~~~ 260 (399)
+++++.|+.+++.||..++|+.+.. + .+--.+.+++||+++| ++ .|.|..|.
T Consensus 166 e~~~~~a~~~~~~G~~~~KlKvg~~--------------------~----~~~d~~~v~avR~a~gg~~~~L~vDaN~-- 219 (391)
T 4e8g_A 166 DEIARIAAEKVAEGFPRLQIKIGGR--------------------P----VEIDIETVRKVWERIRGTGTRLAVDGNR-- 219 (391)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHcCCcEEEEcCCCC--------------------C----HHHHHHHHHHHHHHhCCCCCeEEEeCCC--
Confidence 4556777888889999999997651 1 2234788999999998 76 57777664
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++.++ |++ +| ...++..+.+++.+++||++...+ +++++.++++.+.
T Consensus 220 -------~w~~~~A~~~~~~L~~~~i-~iE--eP--------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a 281 (391)
T 4e8g_A 220 -------SLPSRDALRLSRECPEIPF-VLE--QP--------CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGL 281 (391)
T ss_dssp -------CCCHHHHHHHHHHCTTSCE-EEE--SC--------SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhcCe-EEe--cC--------CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 3357789999999999999 887 44 124567888999999999999998 8999999999999
Q ss_pred CcEEEechHHh
Q 015862 340 ADLVVYGRLFL 350 (399)
Q Consensus 340 ~D~V~~gR~~i 350 (399)
+|+|.+--..+
T Consensus 282 ~d~v~ik~~~~ 292 (391)
T 4e8g_A 282 CDGFGMKLTRI 292 (391)
T ss_dssp CSEEEEEHHHH
T ss_pred CCEEEeCcccc
Confidence 99998855443
No 136
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.57 E-value=1.6e-07 Score=97.88 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=106.3
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC--ceEEEecCC----
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD--RVGIRLSPF---- 259 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~--~v~vrls~~---- 259 (399)
.+.|+...++|+|.|-|.+++-.=..+++ .|.+ .+.. .++++++.++.|.+ .+++...-.
T Consensus 350 ~~~a~~~l~aGad~V~igt~~~~~~~~~~-----~~~~-----~~~~----~~~i~~~~~~~g~~~ivv~iD~~~~~~~~ 415 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDAVYAAEKYY-----ELGN-----RGDG----TSPIETISKAYGAQAVVISVDPKRVYVNS 415 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHHHHH-----HTTS-----CCCS----CSHHHHHHHHHCGGGEEEEECEEEEEESS
T ss_pred HHHHHHHHHcCCCEEEECCHHhhCchhhc-----cccc-----cccC----HHHHHHHHHHhCCCcEEEEEEcccccccc
Confidence 67788888999999999987610001111 0111 1111 35666777777754 345544200
Q ss_pred ----------------cc-------cCCCCCCC-hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh
Q 015862 260 ----------------AN-------YMESGDSN-PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA 315 (399)
Q Consensus 260 ----------------~~-------~~~~~~~~-~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~ 315 (399)
+. ..-.+|.. +..++.++++.+++.|++.|-++......... .++++.++.++++
T Consensus 416 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~-G~d~~li~~l~~~ 494 (555)
T 1jvn_A 416 QADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNS-GYDLELIEHVKDA 494 (555)
T ss_dssp GGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCS-CCCHHHHHHHHHH
T ss_pred ccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHh
Confidence 00 00012221 11125678999999999999876544333322 2467889999999
Q ss_pred cCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 316 FKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 316 ~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
+++|||++||+ |++++.++++...||.|++||+++..|....++++
T Consensus 495 ~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 495 VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHH
T ss_pred CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHH
Confidence 99999999999 99999999985449999999999999987777653
No 137
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.55 E-value=6.1e-07 Score=89.31 Aligned_cols=123 Identities=13% Similarity=0.108 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
.++.|+.+++.||..++|+.+.. . .+--.+++++||+++ ++ .|.++.|.
T Consensus 152 ~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~-~~~~l~vDan~----- 201 (385)
T 3i6e_A 152 DIALMERLRADGVGLIKLKTGFR--------------------D----HAFDIMRLELIARDF-PEFRVRVDYNQ----- 201 (385)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHC-TTSEEEEECTT-----
T ss_pred HHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhC-CCCeEEEECCC-----
Confidence 34556677788999999997641 1 223478999999999 66 67777664
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
..+.++++++++.|++.|++||+ +|. .+..++..+.+++.+++||++.+.+ +++++.++++.+.+|+
T Consensus 202 ----~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~ 269 (385)
T 3i6e_A 202 ----GLEIDEAVPRVLDVAQFQPDFIE--QPV------RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDG 269 (385)
T ss_dssp ----CCCGGGHHHHHHHHHTTCCSCEE--CCS------CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSE
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCE
Confidence 22456788999999999999988 442 1234667888999999999999998 8999999999999999
Q ss_pred EEechHH
Q 015862 343 VVYGRLF 349 (399)
Q Consensus 343 V~~gR~~ 349 (399)
|.+--.-
T Consensus 270 v~~k~~~ 276 (385)
T 3i6e_A 270 VSIKIMK 276 (385)
T ss_dssp EEECHHH
T ss_pred EEecccc
Confidence 9874433
No 138
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.55 E-value=9.1e-07 Score=82.41 Aligned_cols=85 Identities=13% Similarity=0.010 Sum_probs=65.6
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..+.++.+++.|++.+-++......... ...++.++.+++.+++||+++||+ +++++.++++.| +|.|++|++++..
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~-g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vgsal~~~ 231 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSMDRDGTKE-GYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAG-AEAALAASVFHFG 231 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTTTTTCS-CCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCCcC-CCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCC-CHHHHHHHHHHcC
Confidence 3557778888999987776432221111 235778899999999999999999 799999999877 9999999999999
Q ss_pred CcHHHHHH
Q 015862 353 PDLPRRFE 360 (399)
Q Consensus 353 Pdl~~k~~ 360 (399)
|+-+.+++
T Consensus 232 ~~~~~~~~ 239 (252)
T 1ka9_F 232 EIPIPKLK 239 (252)
T ss_dssp SSCHHHHH
T ss_pred CCCHHHHH
Confidence 95555543
No 139
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.54 E-value=8.2e-07 Score=88.38 Aligned_cols=128 Identities=15% Similarity=0.042 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||..++|+.++. +. .++ .+--.+.+++||+++|++ .|.|+.|.
T Consensus 147 e~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~-~~~----~~~d~~~v~avR~a~G~~~~L~vDaN~--- 203 (386)
T 3fv9_G 147 EAMRAKVARHRAQGFKGHSIKIGAS---------------EA-EGG----PALDAERITACLADRQPGEWYLADANN--- 203 (386)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCC---------------TT-TTH----HHHHHHHHHHHTTTCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEEeccCC---------------CC-CCC----HHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 4557777888899999999998751 00 112 344578999999999987 57887765
Q ss_pred cCCCCCCChHHHHHHHHHhh-hhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESL-NKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~L-e~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.| ++.++ ||+ +|. +.++..+.+++.+++||++.+.+ +++++.++++.+.
T Consensus 204 ------~~~~~~A~~~~~~l~~~~~i-~iE--eP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a 266 (386)
T 3fv9_G 204 ------GLTVEHALRMLSLLPPGLDI-VLE--APC--------ASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDL 266 (386)
T ss_dssp ------CCCHHHHHHHHHHSCSSCCC-EEE--CCC--------SSHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTC
T ss_pred ------CCCHHHHHHHHHHhhccCCc-EEe--cCC--------CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCC
Confidence 33577899999999 78888 877 441 14567788999999999999998 8999999999999
Q ss_pred CcEEEechHHh
Q 015862 340 ADLVVYGRLFL 350 (399)
Q Consensus 340 ~D~V~~gR~~i 350 (399)
+|+|.+--..+
T Consensus 267 ~d~v~~k~~~~ 277 (386)
T 3fv9_G 267 CDGVGLKVSKQ 277 (386)
T ss_dssp CSEEEEEHHHH
T ss_pred CCEEEECcccc
Confidence 99998754443
No 140
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.54 E-value=7.4e-07 Score=88.61 Aligned_cols=120 Identities=17% Similarity=0.179 Sum_probs=92.7
Q ss_pred HHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCC
Q 015862 189 ARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESG 266 (399)
Q Consensus 189 A~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~ 266 (399)
|+++.+ .||..++|+.|.. . .+--.+.+++||+++|++ .|.|..|.
T Consensus 156 ~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~-------- 203 (382)
T 3dgb_A 156 AQKMLDLRRHRIFKLKIGAG--------------------E----VDRDLAHVIAIKKALGDSASVRVDVNQ-------- 203 (382)
T ss_dssp HHHHHHTTSCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT--------
T ss_pred HHHHHHhCCCCEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCeEEEeCCC--------
Confidence 344444 7999999997641 1 123478899999999976 57776654
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
..+.++++++++.|++.++.||+ +|. .+..++..+.+++.+++||++.+.+ +++++.++++.+.+|+|.+
T Consensus 204 -~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~ 274 (382)
T 3dgb_A 204 -AWDEAVALRACRILGGNGIDLIE--QPI------SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFAL 274 (382)
T ss_dssp -CBCHHHHHHHHHHHHTTTCCCEE--CCB------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred -CCCHHHHHHHHHHHhhcCcCeee--CCC------CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 23567899999999999999988 441 1234667888999999999999998 8999999999999999987
Q ss_pred chHH
Q 015862 346 GRLF 349 (399)
Q Consensus 346 gR~~ 349 (399)
--.-
T Consensus 275 k~~~ 278 (382)
T 3dgb_A 275 KIAK 278 (382)
T ss_dssp CHHH
T ss_pred cccc
Confidence 5443
No 141
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=98.52 E-value=1.4e-06 Score=86.30 Aligned_cols=121 Identities=18% Similarity=0.234 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
++.++.+....+.||+.++++.+.+ .+--++.|++||+++|++ .|.|..|.
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~g~~-------------------------~~~di~~v~avr~~~g~~~~l~vDaN~--- 197 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKIGFG-------------------------VEEDLRVIAAVREAIGPDMRLMIDANH--- 197 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHTTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhccceecccccCC-------------------------hHHHHHHHHHHHHhcCCcEEEEEecCc---
Confidence 3445556677789999999997642 122368899999999987 46666554
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.++.|++ +|. .+...+..+.+++.+++||++...+ +.+++.++++.+.+
T Consensus 198 ------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~ 263 (378)
T 4hpn_A 198 ------GYTVTEAITLGDRAAGFGIDWFE--EPV------VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAV 263 (378)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ------ccCHHHHHHHHhhhhhcccchhh--cCC------CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCC
Confidence 33678899999999999999988 552 1234567788999999999988888 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 264 d~i~~ 268 (378)
T 4hpn_A 264 DILQP 268 (378)
T ss_dssp SEECC
T ss_pred CEEee
Confidence 98854
No 142
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.50 E-value=1.1e-06 Score=81.89 Aligned_cols=83 Identities=14% Similarity=0.009 Sum_probs=63.5
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+++.|++.+-++........ ....++.++++++.+++||+++||+ +++++.++++.| +|.|++|++++..
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vGsal~~~ 230 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFR 230 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSC-SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCC-CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-ChHHHHHHHHHcC
Confidence 355777888899998877643222111 1235678888999899999999999 799999999877 9999999999999
Q ss_pred CcHHHH
Q 015862 353 PDLPRR 358 (399)
Q Consensus 353 Pdl~~k 358 (399)
|+-+.+
T Consensus 231 ~~~~~~ 236 (253)
T 1thf_D 231 EIDVRE 236 (253)
T ss_dssp CSCHHH
T ss_pred CCCHHH
Confidence 933333
No 143
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=98.50 E-value=4e-07 Score=90.68 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
+++.++.+++.||..++|+.+. .+++ --.+.+++||+++|++ .|.|..|.
T Consensus 168 ~~~~~~~~~~~G~~~~Kikvg~--------------------~~~~----~d~~~v~avR~~~G~~~~l~vDaN~----- 218 (388)
T 4h83_A 168 IADEMHNYQELGLAGVKFKVGG--------------------LSAA----EDAARITAAREAAGDDFIICIDANQ----- 218 (388)
T ss_dssp HHHHHHHHHHHTBSEEEEECSS--------------------SCHH----HHHHHHHHHHHHHCSSSEEEEECTT-----
T ss_pred HHHHHHHHHHcCCceEeecCCC--------------------CCHH----HHHHHHHHHHHhcCCCeEEEEecCc-----
Confidence 4667788899999999998643 1122 2267899999999987 57776664
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
..+.++++++++.|++.++.|++ +|. .........+.+++.+++||++...+ +++++.++++.|.+|+
T Consensus 219 ----~~~~~~A~~~~~~l~~~~~~~iE--eP~-----~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~ 287 (388)
T 4h83_A 219 ----GYKPAVAVDLSRRIADLNIRWFE--EPV-----EWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDV 287 (388)
T ss_dssp ----CBCHHHHHHHHHHTTTSCCCCEE--SCB-----CSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSE
T ss_pred ----CCCHHHHHHHHHHhhhcCcceee--cCc-----ccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCe
Confidence 33578899999999999999988 442 11112456788999999999998888 9999999999999999
Q ss_pred EEe
Q 015862 343 VVY 345 (399)
Q Consensus 343 V~~ 345 (399)
|.+
T Consensus 288 i~~ 290 (388)
T 4h83_A 288 CNF 290 (388)
T ss_dssp ECC
T ss_pred Eee
Confidence 854
No 144
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=98.48 E-value=1.6e-06 Score=86.72 Aligned_cols=124 Identities=15% Similarity=0.179 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 182 VNDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 182 i~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
.+++++.|+.+++. ||..++|+.|. + ..--.+.+++||+++ ++ .|.|+.|.
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~---------------------~----~~~d~~~v~avR~~~-~~~~l~vDaN~- 221 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTT---------------------D----CAGDVAILRAVREAL-PGVNLRVDPNA- 221 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCS---------------------C----HHHHHHHHHHHHHHC-TTSEEEEECTT-
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCC---------------------C----HHHHHHHHHHHHHhC-CCCeEEeeCCC-
Confidence 35667788888888 99999999752 1 123478999999999 66 57777664
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++.+++.|++.+++||+ +|. . ..+..+.+++.+++||++.+.+ +++++.++++.+
T Consensus 222 --------~w~~~~A~~~~~~l~~~~i~~iE--qP~-----~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 283 (398)
T 4dye_A 222 --------AWSVPDSVRAGIALEELDLEYLE--DPC-----V---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLN 283 (398)
T ss_dssp --------CSCHHHHHHHHHHHGGGCCSEEE--CCS-----S---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTT
T ss_pred --------CCCHHHHHHHHHHHhhcCCCEEc--CCC-----C---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhC
Confidence 33578899999999999999998 442 1 4567788999999999999888 899999999999
Q ss_pred CCcEEEechHHh
Q 015862 339 RADLVVYGRLFL 350 (399)
Q Consensus 339 ~~D~V~~gR~~i 350 (399)
.+|+|.+--.-+
T Consensus 284 a~d~v~~k~~~~ 295 (398)
T 4dye_A 284 AVDVIHGDVYKW 295 (398)
T ss_dssp CCSEEEECHHHH
T ss_pred CCCEEEeCcccc
Confidence 999998755443
No 145
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.48 E-value=5.4e-07 Score=81.43 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
+.+-++.+.++|+|.|++|... | ...+.++++|+.++++ .|++-. .
T Consensus 24 ~~~~~~~~~~~G~~~iev~~~~---------~------------------~~~~~i~~ir~~~~~~~~ig~~~-v----- 70 (205)
T 1wa3_A 24 AKEKALAVFEGGVHLIEITFTV---------P------------------DADTVIKELSFLKEKGAIIGAGT-V----- 70 (205)
T ss_dssp HHHHHHHHHHTTCCEEEEETTS---------T------------------THHHHHHHTHHHHHTTCEEEEES-C-----
T ss_pred HHHHHHHHHHCCCCEEEEeCCC---------h------------------hHHHHHHHHHHHCCCCcEEEecc-c-----
Confidence 3444666778999999998532 1 1256788999988644 444421 1
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc-------------------ccc-------------c-cC---CCch
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK-------------------TRE-------------E-KS---ECPH 307 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~-------------------~~~-------------~-~~---~~~~ 307 (399)
.+.++ ++...+.|+||+ ++.. +. ... . .+ ....
T Consensus 71 -----~~~~~----~~~a~~~Gad~i-v~~~-~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~ 139 (205)
T 1wa3_A 71 -----TSVEQ----CRKAVESGAEFI-VSPH-LDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQ 139 (205)
T ss_dssp -----CSHHH----HHHHHHHTCSEE-ECSS-CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHH
T ss_pred -----CCHHH----HHHHHHcCCCEE-EcCC-CCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHH
Confidence 12232 344455788888 5433 22 000 0 00 0124
Q ss_pred hhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcH
Q 015862 308 SLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 308 ~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl 355 (399)
.++.+++.+ ++||++.||++++++.++++.| +|+|.+|+.++. +||
T Consensus 140 ~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~G-a~~v~vGs~i~~-~d~ 186 (205)
T 1wa3_A 140 FVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAG-VLAVGVGSALVK-GTP 186 (205)
T ss_dssp HHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHT-CSCEEECHHHHC-SCH
T ss_pred HHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCC-CCEEEECccccC-CCH
Confidence 556677777 7999999999999999999999 999999999998 774
No 146
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.47 E-value=1.8e-06 Score=79.82 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=64.3
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+.+.|+|+|-++........ ....++.++.+++.+++||+++||+ +++++.++++.| +|.|++|++++..
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~~~~g~~-~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~G-a~~v~vgsal~~~ 233 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSIDRDGTG-LGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAG-ADAVLAASLFHFR 233 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTTC-SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEEecccCCCCc-CcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcC-CcHHHHHHHHHcC
Confidence 345678888899999987644321111 1235677888999899999999999 689999999887 9999999999998
Q ss_pred CcHHHHH
Q 015862 353 PDLPRRF 359 (399)
Q Consensus 353 Pdl~~k~ 359 (399)
++-..++
T Consensus 234 ~~~~~~~ 240 (253)
T 1h5y_A 234 VLSIAQV 240 (253)
T ss_dssp SSCHHHH
T ss_pred CCCHHHH
Confidence 7544443
No 147
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=98.47 E-value=2.2e-06 Score=85.95 Aligned_cols=120 Identities=13% Similarity=0.187 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCccc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANY 262 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~ 262 (399)
+.++.|+..++.||..++|+.+.+ . | -..+.+++||+++|++ .|.|..+.
T Consensus 191 ~~~~~a~~~~~~G~~~~K~k~g~~------------~--~-----------~~~~~v~~vR~~~g~~~~l~vDaN~---- 241 (412)
T 4h1z_A 191 KRAELAAAWQAKGFSSFKFASPVA------------D--D-----------GVAKEMEILRERLGPAVRIACDMHW---- 241 (412)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGC------------T--T-----------CHHHHHHHHHHHHCSSSEEEEECCS----
T ss_pred HHHHHHHHHHhcCcceeccccccc------------h--h-----------hHHHHHHHHHhccCCeEEEEecccc----
Confidence 456677788889999999986542 0 0 1256688999999987 46665554
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 263 MESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
..+.++++++++.|++.++.|++ +|. .....+..+++++.+++||++...+ +.+++.++++.+.+|
T Consensus 242 -----~~~~~~A~~~~~~l~~~~l~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d 308 (412)
T 4h1z_A 242 -----AHTASEAVALIKAMEPHGLWFAE--APV------RTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALA 308 (412)
T ss_dssp -----CCCHHHHHHHHHHHGGGCEEEEE--CCS------CTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCS
T ss_pred -----CCCHHHHHHHHHhhcccccceec--CCC------CccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCC
Confidence 33678899999999999999988 552 1234567888999999999988888 999999999999999
Q ss_pred EEEe
Q 015862 342 LVVY 345 (399)
Q Consensus 342 ~V~~ 345 (399)
+|..
T Consensus 309 iv~~ 312 (412)
T 4h1z_A 309 IVQP 312 (412)
T ss_dssp EECC
T ss_pred EEEe
Confidence 8753
No 148
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.46 E-value=1.6e-06 Score=86.09 Aligned_cols=124 Identities=12% Similarity=0.156 Sum_probs=92.3
Q ss_pred HHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCC
Q 015862 189 ARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESG 266 (399)
Q Consensus 189 A~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~ 266 (399)
|+.+.+ .||..++|+.|.. . .+--.+.|++||+++|++ .|.|..|.
T Consensus 155 ~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~-------- 202 (381)
T 3fcp_A 155 GEKLLAEGRHRAFKLKIGAR--------------------E----LATDLRHTRAIVEALGDRASIRVDVNQ-------- 202 (381)
T ss_dssp HHHHTC----CEEEEECCSS--------------------C----HHHHHHHHHHHHHHTCTTCEEEEECTT--------
T ss_pred HHHHHHhCCCCEEEEecCCC--------------------C----hHHHHHHHHHHHHHcCCCCeEEEECCC--------
Confidence 334444 6999999997641 1 233478899999999976 57776664
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
..+.++++++++.|++.++.||+ +|. .+..++..+.+++.+++||++...+ +++++.++++.+.+|+|.+
T Consensus 203 -~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~ 273 (381)
T 3fcp_A 203 -AWDAATGAKGCRELAAMGVDLIE--QPV------SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYAL 273 (381)
T ss_dssp -CBCHHHHHHHHHHHHHTTCSEEE--CCB------CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred -CCCHHHHHHHHHHHhhcCcccee--CCC------CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 23567899999999999999988 442 1234567888999999999999888 8999999999999999988
Q ss_pred chHHhhCC
Q 015862 346 GRLFLANP 353 (399)
Q Consensus 346 gR~~iadP 353 (399)
--.-+.-.
T Consensus 274 k~~~~GGi 281 (381)
T 3fcp_A 274 KIAKAGGP 281 (381)
T ss_dssp CHHHHTST
T ss_pred cccccCCH
Confidence 65554444
No 149
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.46 E-value=2.9e-06 Score=83.72 Aligned_cols=123 Identities=10% Similarity=0.065 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
+++++.|+.+++.||..++|+.|.. + .+--.+.|++||+++|+..|.|..|.
T Consensus 145 e~~~~~a~~~~~~G~~~iK~Kvg~~--------------------~----~~~d~~~v~avr~~~~~~~l~vDaN~---- 196 (365)
T 3ik4_A 145 VHAAASAKAILARGIKSIKVKTAGV--------------------D----VAYDLARLRAIHQAAPTAPLIVDGNC---- 196 (365)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCSS--------------------C----HHHHHHHHHHHHHHSSSCCEEEECTT----
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCC--------------------C----HHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 4556777888889999999997642 1 23457899999999964345554443
Q ss_pred CCCCCCChHHHHHHHHHhh--hhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 263 MESGDSNPEALGLYMAESL--NKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~L--e~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.| ++.++.|++ +|. .....+..+.+++.+++||++...+ +++++.++++.+.
T Consensus 197 -----~~~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a 263 (365)
T 3ik4_A 197 -----GYDVERALAFCAACKAESIPMVLFE--QPL------PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGT 263 (365)
T ss_dssp -----CCCHHHHHHHHHHHHHTTCCEEEEE--CCS------CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCceEEE--CCC------CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCC
Confidence 33577899999999 888898888 442 1234567788999999999999888 8999999999999
Q ss_pred CcEEEec
Q 015862 340 ADLVVYG 346 (399)
Q Consensus 340 ~D~V~~g 346 (399)
+|+|.+=
T Consensus 264 ~d~v~ik 270 (365)
T 3ik4_A 264 ASVINIK 270 (365)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9998653
No 150
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.46 E-value=1.5e-06 Score=80.40 Aligned_cols=129 Identities=14% Similarity=0.032 Sum_probs=88.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.++|+|.|-+.+++. + |...+.++++.+|+. | -.+.+.++
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~------~-----------------~p~~l~~~i~~~~~~-g-~~v~~~v~-------- 137 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFR------S-----------------RPVDIDSLLTRIRLH-G-LLAMADCS-------- 137 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS------C-----------------CSSCHHHHHHHHHHT-T-CEEEEECS--------
T ss_pred HHHHHHHHHcCCCEEEECcccc------C-----------------ChHHHHHHHHHHHHC-C-CEEEEecC--------
Confidence 3345567889999999887652 1 113567888888875 2 24555433
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
+.+ .++.+++.|+|+|-+....+.. .....+.++.++.+++. ++|||+.||+ |++++.++++.| ||.|
T Consensus 138 ----t~e----ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV 207 (229)
T 3q58_A 138 ----TVN----EGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHG-AWAV 207 (229)
T ss_dssp ----SHH----HHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTT-CSEE
T ss_pred ----CHH----HHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcC-CCEE
Confidence 123 3556778999999543221211 11223456778888887 9999999999 899999999998 9999
Q ss_pred EechHHhhCCcHHHH
Q 015862 344 VYGRLFLANPDLPRR 358 (399)
Q Consensus 344 ~~gR~~iadPdl~~k 358 (399)
++|.+++ +|+.+.+
T Consensus 208 ~VGsai~-~p~~~~~ 221 (229)
T 3q58_A 208 TVGSAIT-RIEHICQ 221 (229)
T ss_dssp EECHHHH-CHHHHHH
T ss_pred EEchHhc-ChHHHHH
Confidence 9997776 5655443
No 151
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.44 E-value=2.8e-06 Score=76.92 Aligned_cols=130 Identities=18% Similarity=0.155 Sum_probs=90.3
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe-cCCcccCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL-SPFANYMESGD 267 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl-s~~~~~~~~~~ 267 (399)
++.+.++|+|+|-+|...+ + .-+.++++.+++. |- .+.+-+ ++
T Consensus 70 ~~~~~~~Gad~v~v~~~~~----------------------~---~~~~~~~~~~~~~-g~-~~~v~~~~~--------- 113 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTD----------------------V---LTIQSCIRAAKEA-GK-QVVVDMICV--------- 113 (211)
T ss_dssp HHHHHHTTCSEEEEETTSC----------------------H---HHHHHHHHHHHHH-TC-EEEEECTTC---------
T ss_pred HHHHHhcCCCEEEEeCCCC----------------------h---hHHHHHHHHHHHc-CC-eEEEEecCC---------
Confidence 6777889999999985431 1 2346677777765 32 344432 22
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+ ..+.++.+.+.|+|++.+..+...+. ......+.++.+|+.+ ++|+++.||++++++.++++.| +|.|.+|
T Consensus 114 ~t----~~~~~~~~~~~g~d~i~v~~g~~g~~-~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~G-ad~vvvG 187 (211)
T 3f4w_A 114 DD----LPARVRLLEEAGADMLAVHTGTDQQA-AGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLG-PDVVIVG 187 (211)
T ss_dssp SS----HHHHHHHHHHHTCCEEEEECCHHHHH-TTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTC-CSEEEEC
T ss_pred CC----HHHHHHHHHHcCCCEEEEcCCCcccc-cCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcC-CCEEEEC
Confidence 11 23456677788999998763321111 1112456788899887 7999999999999999999998 9999999
Q ss_pred hHHhhCCcHHHHHH
Q 015862 347 RLFLANPDLPRRFE 360 (399)
Q Consensus 347 R~~iadPdl~~k~~ 360 (399)
|+++..+|..+.++
T Consensus 188 sai~~~~d~~~~~~ 201 (211)
T 3f4w_A 188 SAITHAADPAGEAR 201 (211)
T ss_dssp HHHHTCSSHHHHHH
T ss_pred HHHcCCCCHHHHHH
Confidence 99999888655443
No 152
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.43 E-value=1.9e-06 Score=84.58 Aligned_cols=124 Identities=20% Similarity=0.206 Sum_probs=83.7
Q ss_pred HHHHHh--CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 190 RNAIEA--GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 190 ~~a~~a--GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
..+.++ |+|.|+||..+|+ ...+.+.|+++|+..+.-+|.++.-.
T Consensus 124 ~~l~~~~~g~~~i~i~~~~g~------------------------~~~~~~~i~~lr~~~~~~~vi~g~v~--------- 170 (351)
T 2c6q_A 124 EQILEAIPQVKYICLDVANGY------------------------SEHFVEFVKDVRKRFPQHTIMAGNVV--------- 170 (351)
T ss_dssp HHHHHHCTTCCEEEEECSCTT------------------------BHHHHHHHHHHHHHCTTSEEEEEEEC---------
T ss_pred HHHHhccCCCCEEEEEecCCC------------------------cHHHHHHHHHHHHhcCCCeEEEEeCC---------
Confidence 334455 9999999976531 13568999999999853366654321
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCCC-cccc-----cccCCCchhhHHHH---hhcCCcEEEeCCC-CHHHHHHHHHc
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEPR-MKTR-----EEKSECPHSLLPMR---KAFKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~~-~~~~-----~~~~~~~~~~~~ir---~~~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
+. +.++.+.++|+|+|.++.+. .... ....+....+..+. +.+++|||+.||+ |+.++.++|.-
T Consensus 171 --t~----e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal 244 (351)
T 2c6q_A 171 --TG----EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA 244 (351)
T ss_dssp --SH----HHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT
T ss_pred --CH----HHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc
Confidence 22 34667788999999885321 0000 00112222333343 3357999999999 99999999999
Q ss_pred CCCcEEEechHHhhCC
Q 015862 338 GRADLVVYGRLFLANP 353 (399)
Q Consensus 338 G~~D~V~~gR~~iadP 353 (399)
| +|+|+|||+++.-+
T Consensus 245 G-A~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 245 G-ADFVMLGGMLAGHS 259 (351)
T ss_dssp T-CSEEEESTTTTTBT
T ss_pred C-CCceeccHHHhcCc
Confidence 9 99999999999754
No 153
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.43 E-value=3e-06 Score=79.37 Aligned_cols=49 Identities=20% Similarity=0.162 Sum_probs=41.7
Q ss_pred chhhHHHHhhcCCcE--EEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcH
Q 015862 306 PHSLLPMRKAFKGTF--LVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 306 ~~~~~~ir~~~~~pv--i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl 355 (399)
+++++.+++..++|| |++|+| |++++..+++.| ||.|++||+++..||.
T Consensus 187 ~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~G-aDGVmVGrAI~~s~DP 238 (291)
T 3o07_A 187 VSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLG-CDGVFVGSGIFKSSNP 238 (291)
T ss_dssp HHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTT-CSCEEECGGGGGSSCH
T ss_pred HHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhC-CCEEEEchHHhCCCCH
Confidence 456777888888897 468999 999999999887 9999999999985553
No 154
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=98.42 E-value=3.3e-06 Score=84.11 Aligned_cols=122 Identities=13% Similarity=0.044 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
+++++.|+.+++.||..++|+.|.. . .+--.+.|++||+++|+..|.|..|.
T Consensus 146 e~~~~~a~~~~~~G~~~iKlKvg~~-----------~-------------~~~d~~~v~avR~~~~~~~L~vDaN~---- 197 (389)
T 3s5s_A 146 ERAEEAARRAAAMGFRALKVKVGGR-----------L-------------AASDPARIEAIHAAAPGASLILDGNG---- 197 (389)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCGG-----------G-------------TTTHHHHHHHHHHHCTTCEEEEECTT----
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCC-----------C-------------hHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 3456777778889999999997652 0 11237789999999974344444443
Q ss_pred CCCCCCChHHHHHHHHHhh--hhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 263 MESGDSNPEALGLYMAESL--NKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~L--e~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.| ++.++.||+ +|. .....+..+.+++.+++||++...+ ++.++.++++.+.
T Consensus 198 -----~w~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a 264 (389)
T 3s5s_A 198 -----GLTAGEALALVAHARRLGADVALLE--QPV------PRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERA 264 (389)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCEEEEEE--CCS------CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCeEEEE--CCC------CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCC
Confidence 33578899999999 888888887 552 1224567788999999999998888 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 265 ~d~v~~ 270 (389)
T 3s5s_A 265 ATVVNI 270 (389)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 998865
No 155
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.42 E-value=8.4e-07 Score=91.44 Aligned_cols=130 Identities=17% Similarity=0.171 Sum_probs=90.5
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE-EecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI-RLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v-rls~~~~~~ 263 (399)
..+.+..+.++|+|.|.|+.+|| ....+.++|+++|+..+.-+|.+ .+.
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g------------------------~~~~v~~~i~~i~~~~~~~~vi~g~v~------ 306 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG------------------------HSQGVIDKVKEVRAKYPSLNIIAGNVA------ 306 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT------------------------TSHHHHHHHHHHHHHCTTSEEEEEEEC------
T ss_pred hHHHHHHHHhhccceEEeccccc------------------------chhhhhhHHHHHHHhCCCceEEeeeec------
Confidence 45667778899999999998874 12457889999999986445544 221
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCC--c-cc---ccccCCCchhhHHHH---hhcCCcEEEeCCC-CHHHHHH
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPR--M-KT---REEKSECPHSLLPMR---KAFKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~--~-~~---~~~~~~~~~~~~~ir---~~~~~pvi~~Ggi-t~~~a~~ 333 (399)
+ .+.++.+.++|+|+|.+..+. . .. .....+....+..++ +.+++|||+.||+ ++.++.+
T Consensus 307 ------t----~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k 376 (511)
T 3usb_A 307 ------T----AEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVK 376 (511)
T ss_dssp ------S----HHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH
T ss_pred ------c----HHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHH
Confidence 2 234677888999999873211 0 00 011123333444443 3357999999999 9999999
Q ss_pred HHHcCCCcEEEechHHhhCCcH
Q 015862 334 AIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl 355 (399)
+|+.| ||.|++||+|+.-.+-
T Consensus 377 ala~G-A~~V~vGs~~~~~~es 397 (511)
T 3usb_A 377 ALAAG-AHVVMLGSMFAGVAES 397 (511)
T ss_dssp HHHTT-CSEEEESTTTTTBTTS
T ss_pred HHHhC-chhheecHHHhcCccC
Confidence 99998 9999999998776653
No 156
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.42 E-value=1.9e-06 Score=85.77 Aligned_cols=130 Identities=20% Similarity=0.178 Sum_probs=88.9
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
+.++.+.++|.|.|.|..+||+ ...+.++|+++|+..+ .+|.+.--.
T Consensus 147 e~~~~lveaGvdvIvldta~G~------------------------~~~~~e~I~~ik~~~~-i~Vi~g~V~-------- 193 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGH------------------------SLNIIRTLKEIKSKMN-IDVIVGNVV-------- 193 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCS------------------------BHHHHHHHHHHHTTCC-CEEEEEEEC--------
T ss_pred HHHHHHHHcCCCEEEEeCCCCC------------------------cccHHHHHHHHHhcCC-CeEEEeecC--------
Confidence 4466778899999999877641 1345788999999874 355442111
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCC--C-cccc---cccCCCchhhHHHHhh---cCCcEEEeCCC-CHHHHHHHHH
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEP--R-MKTR---EEKSECPHSLLPMRKA---FKGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~-~~~~---~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
+ .+.++.++++|+|+|.+... . .... ....+....+..+++. +++|||+.||| ++.++.++|+
T Consensus 194 ---t----~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kala 266 (400)
T 3ffs_A 194 ---T----EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALA 266 (400)
T ss_dssp ---S----HHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHT
T ss_pred ---C----HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHH
Confidence 2 23566788899999988311 1 0000 0112333445556554 57999999999 8999999999
Q ss_pred cCCCcEEEechHHhhCCcHHH
Q 015862 337 EGRADLVVYGRLFLANPDLPR 357 (399)
Q Consensus 337 ~G~~D~V~~gR~~iadPdl~~ 357 (399)
.| ||.|+||++|+.-++-+-
T Consensus 267 lG-Ad~V~vGt~f~~t~Es~~ 286 (400)
T 3ffs_A 267 VG-ASSVMIGSILAGTEESPG 286 (400)
T ss_dssp TT-CSEEEECGGGTTBTTSSC
T ss_pred cC-CCEEEEChHHhcCCCCCc
Confidence 98 999999999999886543
No 157
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.41 E-value=2.4e-06 Score=79.12 Aligned_cols=129 Identities=12% Similarity=-0.004 Sum_probs=88.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.++|.|.|-+.+++. ++ ..++.++++.+++. | -.+.+.++
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~------~~-----------------p~~l~~~i~~~~~~-g-~~v~~~v~-------- 137 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTAR------QR-----------------PVAVEALLARIHHH-H-LLTMADCS-------- 137 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS------CC-----------------SSCHHHHHHHHHHT-T-CEEEEECC--------
T ss_pred HHHHHHHHHcCCCEEEECcccc------CC-----------------HHHHHHHHHHHHHC-C-CEEEEeCC--------
Confidence 3345667889999999887652 11 13567888888875 2 24555433
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc-cccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR-EEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
+. +.++.+++.|+|+|-+....+... ....+.++.++.+++. ++|||+.||+ |++++.++++.| +|.|
T Consensus 138 ----t~----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV 207 (232)
T 3igs_A 138 ----SV----DDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYG-AWAV 207 (232)
T ss_dssp ----SH----HHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTT-CSEE
T ss_pred ----CH----HHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcC-CCEE
Confidence 12 245667789999995432212110 1223456778888887 9999999999 899999999998 9999
Q ss_pred EechHHhhCCcHHHH
Q 015862 344 VYGRLFLANPDLPRR 358 (399)
Q Consensus 344 ~~gR~~iadPdl~~k 358 (399)
++|.+++ +|+...+
T Consensus 208 ~VGsal~-~p~~~~~ 221 (232)
T 3igs_A 208 TVGSAIT-RLEHICG 221 (232)
T ss_dssp EECHHHH-CHHHHHH
T ss_pred EEehHhc-CHHHHHH
Confidence 9998877 5754433
No 158
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=98.39 E-value=5e-06 Score=82.90 Aligned_cols=130 Identities=10% Similarity=0.076 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
+++++.|+.+++.||..++|+.+.+. +. . ......+--.+.|++||+++|+..|.|..|.
T Consensus 167 e~~~~~a~~~~~~Gf~~iKlKvg~~~-------~~----~-----~~~~~~~~di~~v~avR~a~~d~~L~vDaN~---- 226 (393)
T 3u9i_A 167 TAAARAAQAIVARGVTTIKIKIGAGD-------PD----A-----TTIRTMEHDLARIVAIRDVAPTARLILDGNC---- 226 (393)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC-----------------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCS----
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCCc-------cc----c-----cccccHHHHHHHHHHHHHHCCCCeEEEEccC----
Confidence 45677788888899999999987531 00 0 0112245568899999999974245554443
Q ss_pred CCCCCCChHHHHHHHHHhh--hhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 263 MESGDSNPEALGLYMAESL--NKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~L--e~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.| ++.++.|++ +|. .+...+..+.+++.+++||++...+ ++.++.++++.+.
T Consensus 227 -----~w~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 293 (393)
T 3u9i_A 227 -----GYTAPDALRLLDMLGVHGIVPALFE--QPV------AKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAA 293 (393)
T ss_dssp -----CCCHHHHHHHHHTTTTTTCCCSEEE--CCS------CTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCeEEEE--CCC------CCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCC
Confidence 33578899999999 888999988 552 1224567788999999999998888 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|-+
T Consensus 294 ~d~i~~ 299 (393)
T 3u9i_A 294 VDVLNI 299 (393)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 998865
No 159
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.38 E-value=4.6e-07 Score=84.44 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=72.9
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
+..++++.+++.|+|+|+++....... ......+.++.+++.+++||++.|++ ++++++.+++.| +|.|.+|+.++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~ 109 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHE-ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSG-ADKVSVNSAAVR 109 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTT-CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcccc-CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 467789999999999999886532111 11223456788999999999999999 899999999999 999999999999
Q ss_pred CCcHHHHHHhCC
Q 015862 352 NPDLPRRFELNA 363 (399)
Q Consensus 352 dPdl~~k~~~g~ 363 (399)
+|+++.++.+..
T Consensus 110 ~p~~~~~~~~~~ 121 (252)
T 1ka9_F 110 RPELIRELADHF 121 (252)
T ss_dssp CTHHHHHHHHHH
T ss_pred CcHHHHHHHHHc
Confidence 999999987653
No 160
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.38 E-value=5.5e-07 Score=83.96 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=71.8
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
+..++++.+++.|+|+++++....... ......+.++.+++.+++||+++|++ ++++++.+++.| ||.|.+++.++.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~G-ad~V~lg~~~l~ 108 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRG-ADKVSINTAAVE 108 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 356788999999999999986532111 11224556788999899999999999 899999999998 999999999999
Q ss_pred CCcHHHHHHhC
Q 015862 352 NPDLPRRFELN 362 (399)
Q Consensus 352 dPdl~~k~~~g 362 (399)
+|+++.++.+.
T Consensus 109 ~p~~~~~~~~~ 119 (253)
T 1thf_D 109 NPSLITQIAQT 119 (253)
T ss_dssp CTHHHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 99999888754
No 161
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.38 E-value=2.9e-06 Score=78.61 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=67.7
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC----C-CcEEEech
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG----R-ADLVVYGR 347 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G----~-~D~V~~gR 347 (399)
..++++.+++.|++++-++......... ...++.++.+++.+++||+++||+ +++++.++++.. . ||.|++||
T Consensus 146 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 146 PVSLLKRLKEYGLEEIVHTEIEKDGTLQ-EHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTHHHHTC-CCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHHHHHHhCCCCEEEEEeecccccCC-cCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 4567888888999988876543221111 235788899999999999999999 799999999873 4 99999999
Q ss_pred HHhhCCcHHHHHH
Q 015862 348 LFLANPDLPRRFE 360 (399)
Q Consensus 348 ~~iadPdl~~k~~ 360 (399)
+++..+.-+..++
T Consensus 225 al~~~~~~~~~~~ 237 (241)
T 1qo2_A 225 AFLEGILTVEVMK 237 (241)
T ss_dssp HHHTTSSCHHHHH
T ss_pred HHHcCCCCHHHHH
Confidence 9999887666654
No 162
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=98.37 E-value=6e-06 Score=80.44 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~ 263 (399)
+++.|+.+++.||..++|+.+.. + .+--.+.+++||+++|++ .|.|..|.
T Consensus 120 ~~~~a~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avr~~~g~~~~L~vDaN~----- 170 (332)
T 2ozt_A 120 ALEQWQQSWQRGQTTFKWKVGVM--------------------S----PEEEQAILKALLAALPPGAKLRLDANG----- 170 (332)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHSCTTCEEEEECTT-----
T ss_pred HHHHHHHHHHcCCcEEEEEeCCC--------------------C----hHHHHHHHHHHHHHcCCCCEEEEcccC-----
Confidence 46677777889999999986530 1 233468899999999976 35554443
Q ss_pred CCCCCChHHHHHHHHHhhhhh---CceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 264 ESGDSNPEALGLYMAESLNKY---GILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~---Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|+++ ++.||+ +|. ....++..+.+++.+++||++...+ ++.++.++++.+.
T Consensus 171 ----~~~~~~A~~~~~~l~~~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a 238 (332)
T 2ozt_A 171 ----SWDRATANRWFAWLDRHGNGKIEYVE--QPL------PPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGW 238 (332)
T ss_dssp ----CCCHHHHHHHHHHHHHHCCTTEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTC
T ss_pred ----CCCHHHHHHHHHHHHhhccCCcceeE--CCC------CCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 33578899999999999 899888 552 1234567778999999999998888 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 239 ~~~i~i 244 (332)
T 2ozt_A 239 PGFFVI 244 (332)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997665
No 163
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.36 E-value=2.8e-06 Score=87.01 Aligned_cols=131 Identities=19% Similarity=0.181 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.|+++.++|+|+|.++.++|+ .....+.++++++.++.-++... .
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~------------------------~~~~~~~i~~l~~~~p~~pvi~G--~------ 281 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGH------------------------SAGVLRKIAEIRAHFPNRTLIAG--N------ 281 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTT------------------------CHHHHHHHHHHHHHCSSSCEEEE--E------
T ss_pred HHHHHHHHHHcCCCeEEEeeecCc------------------------chhHHHHHHHHHHHCCCCcEeCC--C------
Confidence 467888999999999999976531 12357889999999853354421 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCC---cccc---cccCCCchhhHHHHh---hcCCcEEEeCCC-CHHHHHHH
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPR---MKTR---EEKSECPHSLLPMRK---AFKGTFLVAGGY-DREDGNKA 334 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~---~~~~---~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 334 (399)
-.+. +.+..+.++|+|++.+..+. .... ....+....+..+.+ ..++|||+.||+ ++.++.++
T Consensus 282 ---v~t~----~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~ka 354 (491)
T 1zfj_A 282 ---IATA----EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKA 354 (491)
T ss_dssp ---ECSH----HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHH
T ss_pred ---ccCH----HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHH
Confidence 1122 35556778999999885321 0000 012223334444443 467999999999 99999999
Q ss_pred HHcCCCcEEEechHHhhCCcH
Q 015862 335 IAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 335 L~~G~~D~V~~gR~~iadPdl 355 (399)
++.| +|+|++||+++..++-
T Consensus 355 l~~G-A~~v~vG~~~~~~~e~ 374 (491)
T 1zfj_A 355 LAAG-GNAVMLGSMFAGTDEA 374 (491)
T ss_dssp HHTT-CSEEEESTTTTTBSSC
T ss_pred HHcC-CcceeeCHHhhCCCcC
Confidence 9998 9999999999976543
No 164
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.35 E-value=6.4e-06 Score=79.20 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=40.5
Q ss_pred hhhHHHHhhcCCcE--EEeCCC-CHHHHHHHHHcCCCcEEEechHHh--hCCc
Q 015862 307 HSLLPMRKAFKGTF--LVAGGY-DREDGNKAIAEGRADLVVYGRLFL--ANPD 354 (399)
Q Consensus 307 ~~~~~ir~~~~~pv--i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~i--adPd 354 (399)
+.++.+++..++|| ++.||| |++++..+++.| ||.|++||+++ .||.
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~G-aDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLG-SDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTT-CSCEEESHHHHTSSCHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcC-cCEEeeHHHHhcCCCHH
Confidence 55667788788997 699999 899999999997 99999999999 5553
No 165
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.34 E-value=2.1e-05 Score=74.05 Aligned_cols=140 Identities=19% Similarity=0.113 Sum_probs=91.4
Q ss_pred HHHHHHHHhCCCEE--EEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 187 LAARNAIEAGFDGV--ELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 187 ~aA~~a~~aGfDgV--eIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.++.|.++|+|.| .++.++. +.+...+.+.++++.+++ .|- ++.+.+.+. .. .
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~--------------------~~~~~~~~~~~v~~~~~~-~g~-~viv~~~~~-G~-~ 158 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSD--------------------EDWEAYRDLGMIAETCEY-WGM-PLIAMMYPR-GK-H 158 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETST--------------------THHHHHHHHHHHHHHHHH-HTC-CEEEEEEEC-ST-T
T ss_pred HHHHHHHHcCCCEEEEEEecCCC--------------------CHHHHHHHHHHHHHHHHH-cCC-CEEEEeCCC-Cc-c
Confidence 34567788999999 5444431 223334566677777664 343 444444221 00 0
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCC---HHH----HHHHHHc
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYD---RED----GNKAIAE 337 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit---~~~----a~~~L~~ 337 (399)
...+.+.++..++++..++.|+|||-++. ...++.++.+++.+++||++.||++ .++ +.++++.
T Consensus 159 l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~ 229 (273)
T 2qjg_A 159 IQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEA 229 (273)
T ss_dssp CSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHH
T ss_pred cCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 00112334445666888899999998762 1246678888888999999999994 667 5556677
Q ss_pred CCCcEEEechHHhhCCcHHHHHH
Q 015862 338 GRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 338 G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
| +|.|++||.++..||....++
T Consensus 230 G-a~gv~vg~~i~~~~~~~~~~~ 251 (273)
T 2qjg_A 230 G-AAGVAVGRNIFQHDDVVGITR 251 (273)
T ss_dssp T-CSEEECCHHHHTSSSHHHHHH
T ss_pred C-CcEEEeeHHhhCCCCHHHHHH
Confidence 7 999999999999998655443
No 166
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.33 E-value=9.7e-06 Score=74.04 Aligned_cols=80 Identities=10% Similarity=0.030 Sum_probs=57.5
Q ss_pred HhhhhhCceEEEEeCCCcccccc--cCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHH
Q 015862 279 ESLNKYGILYCHMVEPRMKTREE--KSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLP 356 (399)
Q Consensus 279 ~~Le~~Gvd~l~v~~~~~~~~~~--~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~ 356 (399)
....+.|+||+-+.......... .+..+..++.+++.+++||++.||++++++.++++.| +|+|.+|++++..+|..
T Consensus 124 ~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~ 202 (221)
T 1yad_A 124 VQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAG-ADGIAVMSGIFSSAEPL 202 (221)
T ss_dssp HHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTT-CSEEEESHHHHTSSSHH
T ss_pred HHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcC-CCEEEEhHHhhCCCCHH
Confidence 34456899999875321111111 1223456777888889999999999999999999988 99999999999988754
Q ss_pred HHH
Q 015862 357 RRF 359 (399)
Q Consensus 357 ~k~ 359 (399)
.++
T Consensus 203 ~~~ 205 (221)
T 1yad_A 203 EAA 205 (221)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 167
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=98.30 E-value=3.8e-06 Score=82.91 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++.++++.+.+.||..++++.|.. ++ +--.+.++++|+++|++ .|.+..|.
T Consensus 145 ~~~~~~~~~~~~~g~~~~K~Kvg~~--------------------~~----~~d~~~v~avr~~~g~~~~l~vDaN~--- 197 (370)
T 2chr_A 145 RDLDSAVEMIERRRHNRFKVKLGFR--------------------SP----QDDLIHMEALSNSLGSKAYLRVDVNQ--- 197 (370)
T ss_dssp HHHHHHHHHHHTTSCCEEEEECSSS--------------------CH----HHHHHHHHHHHHHTTTTSEEEEECTT---
T ss_pred hhHHHHHHHHhhcccceeecccccC--------------------Ch----HHHHHHHHHHHHhcCCCcEEEecCCC---
Confidence 3456677778889999999997641 11 22367799999999987 46666654
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++.+++.|++.++.|++ +|. .+...+..+.+++.+++||++...+ +.+++.++++.+.+
T Consensus 198 ------~~~~~~A~~~~~~l~~~~~~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~ 263 (370)
T 2chr_A 198 ------AWDEQVASVYIPELEALGVELIE--QPV------GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSV 263 (370)
T ss_dssp ------CCCTHHHHHHHHHHHTTTCCEEE--CCS------CSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCceec--CCC------ChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCC
Confidence 23567799999999999999988 552 1234567888999999999988888 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 264 d~i~~ 268 (370)
T 2chr_A 264 DVFSL 268 (370)
T ss_dssp SEECC
T ss_pred cEEEe
Confidence 98754
No 168
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=98.30 E-value=3.2e-06 Score=85.66 Aligned_cols=118 Identities=15% Similarity=0.184 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++ .||..++|+.|.. ++ +--.+.|++||+++ ++ .|.|..|.
T Consensus 195 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~~v~avRea~-~d~~L~vDaN~-- 247 (445)
T 3vdg_A 195 DGIVAQARRMIDEYGFSAIKLKGGVF--------------------AP----EEEMAAVEALRAAF-PDHPLRLDPNA-- 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------CH----HHHHHHHHHHHHHC-TTSCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCC--------------------CH----HHHHHHHHHHHHhC-CCCcEEEECCC--
Confidence 345677777776 4999999996541 11 12368899999999 66 57776654
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++. +.|++ +|. +..+..+.+++.+++||++...+ ++.++.++|+.+.
T Consensus 248 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a 309 (445)
T 3vdg_A 248 -------AWTPQTSVKVAAGLEGV-LEYLE--DPT--------PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNS 309 (445)
T ss_dssp -------CSCHHHHHHHHHHTTTT-CSEEE--CCS--------SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHhhH-HHeee--CCC--------CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCC
Confidence 33578899999999999 99988 551 24567788999999999888777 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 310 ~div~~ 315 (445)
T 3vdg_A 310 VQVVLS 315 (445)
T ss_dssp CSEEEE
T ss_pred CCEEee
Confidence 999876
No 169
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.29 E-value=1.1e-06 Score=81.29 Aligned_cols=88 Identities=20% Similarity=0.191 Sum_probs=71.7
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
+..++++.+++.|+|+++++....... ......+.++.+++.+++||+++|++ ++++++++++.| +|+|.+++.++.
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~G-ad~V~i~~~~~~ 111 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPE-GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAG-ADKVSVNTAAVR 111 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTT-THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcccc-CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 357789999999999999985432211 11123457788999999999999999 899999999998 999999999999
Q ss_pred CCcHHHHHHhC
Q 015862 352 NPDLPRRFELN 362 (399)
Q Consensus 352 dPdl~~k~~~g 362 (399)
||+++.++.+.
T Consensus 112 ~~~~~~~~~~~ 122 (253)
T 1h5y_A 112 NPQLVALLARE 122 (253)
T ss_dssp CTHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999987664
No 170
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=98.28 E-value=2.8e-06 Score=86.04 Aligned_cols=118 Identities=11% Similarity=0.159 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHh-CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEA-GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~a-GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++. ||..++|+.|.. ++ +--++.|++||+++ ++ .|.|..|.
T Consensus 193 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~~v~avRea~-~~~~L~vDaN~-- 245 (445)
T 3va8_A 193 EGVVKQAKKIIDEYGFKAIKLKGGVF--------------------PP----ADEVAAIKALHKAF-PGVPLRLDPNA-- 245 (445)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECSSS--------------------CH----HHHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------CH----HHHHHHHHHHHHhC-CCCcEeeeCCC--
Confidence 3456677777764 999999997541 11 12368899999999 65 57776654
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++. +.|++ +|. +..+..+.+++.+++||++...+ ++.++.++++.+.
T Consensus 246 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 307 (445)
T 3va8_A 246 -------AWTVETSKWVAKELEGI-VEYLE--DPA--------GEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDA 307 (445)
T ss_dssp -------CBCHHHHHHHHHHTTTT-CSEEE--SCB--------SHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhh-cCeEe--ecC--------cCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCC
Confidence 33578899999999999 99988 551 24567788999999999888887 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|.+
T Consensus 308 ~div~~ 313 (445)
T 3va8_A 308 VQVILS 313 (445)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999877
No 171
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=98.28 E-value=7.5e-06 Score=81.57 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+++++.||+.++|+.+ | +.| .+.|++||+++ ++ .|.+..|.
T Consensus 163 e~~~~~a~~~~~~G~~~~KiKvg----------~----~~d-------------~~~v~avr~a~-~~~~l~vDaN~--- 211 (393)
T 1wuf_A 163 ETLLQLVNQYVDQGYERVKLKIA----------P----NKD-------------IQFVEAVRKSF-PKLSLMADANS--- 211 (393)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECB----------T----TBS-------------HHHHHHHHTTC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHHhhHhheeccC----------h----HHH-------------HHHHHHHHHHc-CCCEEEEECCC---
Confidence 34567788888999999999853 1 112 68899999998 44 35554443
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.+++ ++++.|+++++.||+ +|. ....++..+.+++.+++||++...+ +++++.++++.+.+
T Consensus 212 ------~~~~~~a-~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~ 276 (393)
T 1wuf_A 212 ------AYNREDF-LLLKELDQYDLEMIE--QPF------GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSC 276 (393)
T ss_dssp ------CCCGGGH-HHHHTTGGGTCSEEE--CCS------CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHH-HHHHHHHhCCCeEEE--CCC------CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC
Confidence 1234556 889999999999988 552 1234667788999999999998888 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 277 d~v~i 281 (393)
T 1wuf_A 277 RAINL 281 (393)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99876
No 172
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.28 E-value=1.3e-05 Score=74.14 Aligned_cols=131 Identities=16% Similarity=0.130 Sum_probs=95.1
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|+++.--|.|.+ .+..++.+-|.+|+++++.. .+|+=. +..
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNig~lk~-------------------g~~~~v~~eI~~v~~a~~~~--~lKVIl-Et~--- 152 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINIGMVKA-------------------KKYDDVEKDVKAVVDASGKA--LTKVII-ECC--- 152 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHHTTS--EEEEEC-CGG---
T ss_pred HHHHHHHHHcCCCEEEEEeehHHhcc-------------------ccHHHHHHHHHHHHHHhcCC--ceEEEE-ecC---
Confidence 66788899999999999977665442 24567889999999999743 333321 110
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
..+.++-...|+...++|+|||..+.+. . ......+.++.+|+.++ ++|-++||+ |.+++.++|+.| ++.
T Consensus 153 --~Lt~eei~~a~~ia~~aGADfVKTSTGf-~---~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aG-A~r 225 (239)
T 3ngj_A 153 --YLTNEEKVEVCKRCVAAGAEYVKTSTGF-G---THGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNG-ASR 225 (239)
T ss_dssp --GSCHHHHHHHHHHHHHHTCSEEECCCSS-S---SCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTT-EEE
T ss_pred --CCCHHHHHHHHHHHHHHCcCEEECCCCC-C---CCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhc-ccc
Confidence 1245567778888889999999976552 1 12344567777887764 679999999 999999999999 997
Q ss_pred EEechH
Q 015862 343 VVYGRL 348 (399)
Q Consensus 343 V~~gR~ 348 (399)
++..++
T Consensus 226 iGtS~~ 231 (239)
T 3ngj_A 226 IGASAG 231 (239)
T ss_dssp EEESCH
T ss_pred eecccH
Confidence 766554
No 173
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.28 E-value=6.8e-07 Score=82.94 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=70.0
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+++.|+|+|+++....... ....+.+.++.++ .+++||+++|++ ++++++.+++.| ||.|.+|+.++.|
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~~ 108 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIE-NSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLG-YRRQIVSSKVLED 108 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHH-CCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTT-CCEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEeccccccc-CCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCC-CCEEEECchHhhC
Confidence 56789999999999999976432211 1234556777777 789999999999 899999999998 9999999999999
Q ss_pred CcHHHHHHhC
Q 015862 353 PDLPRRFELN 362 (399)
Q Consensus 353 Pdl~~k~~~g 362 (399)
|+++.++ +.
T Consensus 109 p~~~~~~-~~ 117 (241)
T 1qo2_A 109 PSFLKSL-RE 117 (241)
T ss_dssp TTHHHHH-HT
T ss_pred hHHHHHH-HH
Confidence 9999999 54
No 174
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.28 E-value=3e-06 Score=84.52 Aligned_cols=130 Identities=13% Similarity=0.086 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
++++++.|+.+++.||+.++|+.+.+. + |-.+ ....+--.+.|++||+++|++ .|.|..|.
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~---~------------~~~~-~~~~~~d~~~v~avR~a~g~~~~l~vDaN~-- 210 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGG---R------------HMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANN-- 210 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTT---T------------TSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT--
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCC---c------------cccc-cccHHHHHHHHHHHHHHcCCCCcEEeeCCC--
Confidence 456677788888999999999987520 1 1111 112345688999999999987 57777665
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh-----cCCcEEEeCCCCHHHHHHHH
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA-----FKGTFLVAGGYDREDGNKAI 335 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggit~~~a~~~L 335 (399)
..+.++++++++.|++.++.|++ +|. . ...+..+.+++. .++||.....+...++.+++
T Consensus 211 -------~w~~~~A~~~~~~L~~~~l~~iE--eP~-----~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~~~~~~~li 274 (392)
T 3v5c_A 211 -------AYNLNLTKEVLAALSDVNLYWLE--AAF-----H--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWA 274 (392)
T ss_dssp -------CCCHHHHHHHHHHTTTSCCCEEE--CSS-----S--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHH
T ss_pred -------CcCHHHHHHHHHhcccCCCeEEe--CCC-----C--cCHHHHHHHHHhhccCCCCCcEECCCcccHHHHHHHH
Confidence 33578899999999999999988 542 1 134556677775 56777766666677888999
Q ss_pred HcCCCcEEEe
Q 015862 336 AEGRADLVVY 345 (399)
Q Consensus 336 ~~G~~D~V~~ 345 (399)
+.+.+|+|-+
T Consensus 275 ~~~a~dii~~ 284 (392)
T 3v5c_A 275 TRGRVDVLQY 284 (392)
T ss_dssp HTTSCCEECC
T ss_pred HcCCCcEEEe
Confidence 9999998865
No 175
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=98.23 E-value=5.2e-06 Score=84.00 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++ .||..++|+.|.. +++ --.+.|++||+++ ++ .|.|..|.
T Consensus 190 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~rv~avRea~-pd~~L~vDaN~-- 242 (441)
T 3vc5_A 190 DGIVAQARLLIGEYGFRSIKLKGGVF--------------------PPE----QEAEAIQALRDAF-PGLPLRLDPNA-- 242 (441)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------CHH----HHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------CHH----HHHHHHHHHHHhC-CCCcEeccCCC--
Confidence 445667777776 5999999997541 111 2267899999999 55 57776664
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++. +.|++ +|. +..+..+.+++.+++||++...+ +..++.++|+.+.
T Consensus 243 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a 304 (441)
T 3vc5_A 243 -------AWTVETSIRVGRALDGV-LEYLE--DPT--------PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRP 304 (441)
T ss_dssp -------CSCHHHHHHHHHHTTTT-CSEEE--CCS--------SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCC
T ss_pred -------CCCHHHHHHHHHHHHHH-HHHhh--ccC--------CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 33578899999999999 99988 551 24567788999999999887777 8999999999999
Q ss_pred CcEEEe
Q 015862 340 ADLVVY 345 (399)
Q Consensus 340 ~D~V~~ 345 (399)
+|+|-+
T Consensus 305 ~dii~~ 310 (441)
T 3vc5_A 305 IGVLLI 310 (441)
T ss_dssp CSEEEE
T ss_pred CCEEee
Confidence 999876
No 176
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=98.22 E-value=1.9e-05 Score=77.97 Aligned_cols=118 Identities=19% Similarity=0.158 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCccc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANY 262 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~ 262 (399)
++++.|+++.+.||..++|+.|. + .+--.+.|++||+++|++ .|.|..|.
T Consensus 147 ~~~~~a~~~~~~G~~~~KiKvG~---------------------~----~~~d~~~v~avr~a~g~~~~l~vDaN~---- 197 (372)
T 3cyj_A 147 RLQEQLGGWAAAGIPRVKMKVGR---------------------E----PEKDPERVRAAREAIGESVELMVDANG---- 197 (372)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS---------------------S----GGGHHHHHHHHHHHHCTTSEEEEECTT----
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 35677788888999999998542 1 123478999999999986 46666654
Q ss_pred CCCCCCChHHHHHHHHHhhhhh-CceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcC
Q 015862 263 MESGDSNPEALGLYMAESLNKY-GILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~-Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|+++ ++.||+ +|. ....++..+.+++.++ +||++...+ |..++.++ .+
T Consensus 198 -----~~~~~~a~~~~~~l~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~ 262 (372)
T 3cyj_A 198 -----AYTRKQALYWAGAFAREAGISYLE--EPV------SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AG 262 (372)
T ss_dssp -----CSCHHHHHHHHHHHHHHHCCCEEE--CSS------CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HT
T ss_pred -----CCCHHHHHHHHHHHHhhcCCcEEE--CCC------CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hC
Confidence 23578899999999999 999988 542 1234566778999888 699888888 88888887 66
Q ss_pred CCcEEEe
Q 015862 339 RADLVVY 345 (399)
Q Consensus 339 ~~D~V~~ 345 (399)
.+|+|.+
T Consensus 263 a~d~i~i 269 (372)
T 3cyj_A 263 CVDILQA 269 (372)
T ss_dssp TCSEEEE
T ss_pred CCCEEec
Confidence 7998876
No 177
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.19 E-value=1.9e-06 Score=79.96 Aligned_cols=86 Identities=19% Similarity=0.214 Sum_probs=70.3
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+++.|+|+||+..-... ......+ +.++.+++.+++|++++|++ ++++++.+++.| ||.|.+++.++.|
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~-~~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~G-ad~V~lg~~~l~~ 110 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAA-FGTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATG-CTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHH-HTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEecCchh-hcCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcC-CCEEEECchHhhC
Confidence 456788999999999998742111 0122334 77888999999999999999 899999999998 9999999999999
Q ss_pred CcHHHHHHhC
Q 015862 353 PDLPRRFELN 362 (399)
Q Consensus 353 Pdl~~k~~~g 362 (399)
|+++.++.+.
T Consensus 111 p~~~~~~~~~ 120 (244)
T 1vzw_A 111 PEWVAKVIAE 120 (244)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 178
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.19 E-value=2e-06 Score=79.64 Aligned_cols=86 Identities=22% Similarity=0.206 Sum_probs=70.1
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+++.|+++||+..-... ....... +.++.+++.+++|++++|++ ++++++.+++.| ||.|.+++.++.+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~-~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~G-ad~V~lg~~~l~~ 109 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAA-FGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATG-CARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHH-TTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEcCccc-ccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcC-CCEEEECchHhhC
Confidence 566888999999999998642111 0112233 78889999999999999999 899999999998 9999999999999
Q ss_pred CcHHHHHHhC
Q 015862 353 PDLPRRFELN 362 (399)
Q Consensus 353 Pdl~~k~~~g 362 (399)
|+++.++.+.
T Consensus 110 p~~~~~~~~~ 119 (244)
T 2y88_A 110 PQWCARVIGE 119 (244)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9999887653
No 179
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.19 E-value=3.3e-05 Score=73.17 Aligned_cols=131 Identities=13% Similarity=0.062 Sum_probs=91.4
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|++.|+|.|+++.-.|.|.+ ++...+.+-|.+|+++++.. .+|+=....
T Consensus 129 v~Ea~~Ai~~GAdEIDmVINig~lk~-------------------g~~~~v~~eI~~V~~a~~~~--~lKVIlEt~---- 183 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMNYPWLSE-------------------KRYTDVFQDIRAVRLAAKDA--ILKVILETS---- 183 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTS--EEEEECCGG----
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcC-------------------CcHHHHHHHHHHHHHHhcCC--CceEEEECC----
Confidence 66778899999999998866654433 24567888999999999753 244322111
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++....|+...++|+|||-.+.+ +. ......+.++.+|+.+ +++|.+.||+ |.++|.++|+.|
T Consensus 184 --~Lt~eei~~A~~ia~eaGADfVKTSTG-f~---~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aG- 256 (288)
T 3oa3_A 184 --QLTADEIIAGCVLSSLAGADYVKTSTG-FN---GPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAG- 256 (288)
T ss_dssp --GCCHHHHHHHHHHHHHTTCSEEECCCS-SS---SCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTT-
T ss_pred --CCCHHHHHHHHHHHHHcCCCEEEcCCC-CC---CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-
Confidence 123455677788888999999987644 22 1223344555555554 4789999999 999999999999
Q ss_pred CcEEEechH
Q 015862 340 ADLVVYGRL 348 (399)
Q Consensus 340 ~D~V~~gR~ 348 (399)
++-++..++
T Consensus 257 A~RiGtS~g 265 (288)
T 3oa3_A 257 AERLGASAG 265 (288)
T ss_dssp CSEEEESCH
T ss_pred CceeehhhH
Confidence 996666554
No 180
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.18 E-value=3.4e-05 Score=71.78 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=68.9
Q ss_pred HHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc---ccccCCCchhhHHHHhh-
Q 015862 241 EAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT---REEKSECPHSLLPMRKA- 315 (399)
Q Consensus 241 ~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~---~~~~~~~~~~~~~ir~~- 315 (399)
..+|+..+++ .|++-.. +.+++ ....+.|+|||-+.. .+.. +......++.++.+++.
T Consensus 126 ~~~r~~~~~~~~iG~S~h------------t~~Ea----~~A~~~GaDyI~vgp-vf~T~tK~~~~~~gl~~l~~~~~~~ 188 (243)
T 3o63_A 126 NVARQILAPDTLIGRSTH------------DPDQV----AAAAAGDADYFCVGP-CWPTPTKPGRAAPGLGLVRVAAELG 188 (243)
T ss_dssp HHHHHHSCTTCEEEEEEC------------SHHHH----HHHHHSSCSEEEECC-SSCCCC-----CCCHHHHHHHHTC-
T ss_pred HHHHHhhCCCCEEEEeCC------------CHHHH----HHHhhCCCCEEEEcC-ccCCCCCCCcchhhHHHHHHHHHhc
Confidence 4566667766 5776332 23332 233457999998853 2211 11112235567777776
Q ss_pred -cCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHH
Q 015862 316 -FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 316 -~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
.++||++.|||+++++.++++.| +|+|+++++++..+|....++
T Consensus 189 ~~~iPvvAiGGI~~~ni~~~~~aG-a~gvav~sai~~a~dp~~a~~ 233 (243)
T 3o63_A 189 GDDKPWFAIGGINAQRLPAVLDAG-ARRIVVVRAITSADDPRAAAE 233 (243)
T ss_dssp --CCCEEEESSCCTTTHHHHHHTT-CCCEEESHHHHTCSSHHHHHH
T ss_pred cCCCCEEEecCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHHH
Confidence 48999999999999999999999 999999999999888655544
No 181
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=98.18 E-value=2e-05 Score=78.77 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=88.5
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCCh
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNP 270 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~ 270 (399)
+++.||.+++|+.+.| |. .| ....+--.+.+++||+++|++ .|.|..|. ..+
T Consensus 170 ~~~~Gf~~~K~Kv~~g--------~~-------~g---~~~~~~di~~v~avRea~G~~~~L~vDaN~---------~w~ 222 (404)
T 3ekg_A 170 AQKMGFIGGKMPLHHG--------PS-------EG---EEGLKKNLEELATMRERVGPDFWLMFDCWM---------SLD 222 (404)
T ss_dssp HHHTTCSEEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSEEEEECTT---------CCC
T ss_pred HHHcCCCEEEEecCCC--------Cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEecCCC---------CCC
Confidence 4578999999997543 10 01 112445688999999999987 57776664 335
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcE-EEeC-CC-CHHHHHHHHHcCCCcEEEe
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTF-LVAG-GY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pv-i~~G-gi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.++++++++.|+++++.|++ +|. .+...+..+.+++.+++|+ |+.| .+ +..++.++++.+.+|+|-+
T Consensus 223 ~~~A~~~~~~Le~~~l~~iE--eP~------~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~ 292 (404)
T 3ekg_A 223 LNYATRLARGAREYGLKWIE--EAL------PPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQP 292 (404)
T ss_dssp HHHHHHHHHHHGGGTCCEEE--CCS------CTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhhcCCcEEe--cCC------CcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEec
Confidence 78899999999999999988 552 1234567888999988873 4444 55 8999999999999998865
No 182
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.15 E-value=1.5e-05 Score=73.37 Aligned_cols=129 Identities=18% Similarity=0.220 Sum_probs=83.2
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..+.++|+|+|.+|.... + ..+.++++.+|+. | -.+++.+++..
T Consensus 81 ~~~~~agad~v~vH~~~~---------------~----------~~~~~~~~~i~~~-g-~~igv~~~p~t--------- 124 (228)
T 1h1y_A 81 EPLAKAGASGFTFHIEVS---------------R----------DNWQELIQSIKAK-G-MRPGVSLRPGT--------- 124 (228)
T ss_dssp HHHHHHTCSEEEEEGGGC---------------T----------TTHHHHHHHHHHT-T-CEEEEEECTTS---------
T ss_pred HHHHHcCCCEEEECCCCc---------------c----------cHHHHHHHHHHHc-C-CCEEEEEeCCC---------
Confidence 445568999999996541 1 0114667777664 3 25778777631
Q ss_pred hHHHHHHHHHhhhhh--CceEEEEeCC--CcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEE
Q 015862 270 PEALGLYMAESLNKY--GILYCHMVEP--RMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVV 344 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~--Gvd~l~v~~~--~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 344 (399)
+.+ ..+.+.+. ++||+-+... ..+.........+.++++|+.. +.|+++.||++++.+.++++.| +|.|.
T Consensus 125 ~~e----~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aG-aD~vv 199 (228)
T 1h1y_A 125 PVE----EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAG-ANCIV 199 (228)
T ss_dssp CGG----GGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHT-CCEEE
T ss_pred CHH----HHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcC-CCEEE
Confidence 111 12233343 7898876422 1111111112234567788887 7899999999889999999998 99999
Q ss_pred echHHhhCCcHHHHH
Q 015862 345 YGRLFLANPDLPRRF 359 (399)
Q Consensus 345 ~gR~~iadPdl~~k~ 359 (399)
+|++++..||....+
T Consensus 200 vGsai~~~~d~~~~~ 214 (228)
T 1h1y_A 200 AGSSIFGAAEPGEVI 214 (228)
T ss_dssp ESHHHHTSSCHHHHH
T ss_pred ECHHHHCCCCHHHHH
Confidence 999999988764443
No 183
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.13 E-value=6.1e-05 Score=70.91 Aligned_cols=141 Identities=16% Similarity=0.092 Sum_probs=88.3
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCC-C-ceEEEecCCcccC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGA-D-RVGIRLSPFANYM 263 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~-~-~v~vrls~~~~~~ 263 (399)
...++.|.+.|+|+|+++.-- .. ++. +..++-+.+|++.+.. . ++.+-..+ +..
T Consensus 95 ~~~ve~Ai~~Ga~~v~~~~ni--------------g~----~~~----~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~ 150 (263)
T 1w8s_A 95 NCSVEEAVSLGASAVGYTIYP--------------GS----GFE----WKMFEELARIKRDAVKFDLPLVVESFP--RGG 150 (263)
T ss_dssp SSCHHHHHHTTCSEEEEEECT--------------TS----TTH----HHHHHHHHHHHHHHHHHTCCEEEEECC--CST
T ss_pred HHHHHHHHHCCCCEEEEEEec--------------CC----cCH----HHHHHHHHHHHHHHHHcCCeEEEEeeC--CCC
Confidence 345677889999999987422 11 122 2334444555544421 1 33332111 111
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCC-cEEEeCCC---CHHHHHHHH----
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKG-TFLVAGGY---DREDGNKAI---- 335 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggi---t~~~a~~~L---- 335 (399)
..+...+.+...+.|+...+.|+|||-++.+ ...+.++.+++.++. ||++.||+ |.+++.+.+
T Consensus 151 ~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~---------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~ 221 (263)
T 1w8s_A 151 KVVNETAPEIVAYAARIALELGADAMKIKYT---------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVL 221 (263)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHTCSEEEEECC---------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1111113455555678888899999987621 134677888888887 99999998 466665555
Q ss_pred HcCCCcEEEechHHhhCCcHHHHHH
Q 015862 336 AEGRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 336 ~~G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
+.| +|.+++||.++..||....++
T Consensus 222 ~aG-A~GvsvgraI~~~~dp~~~~~ 245 (263)
T 1w8s_A 222 EAG-ALGIAVGRNVWQRRDALKFAR 245 (263)
T ss_dssp HTT-CCEEEESHHHHTSTTHHHHHH
T ss_pred HcC-CeEEEEehhhcCCcCHHHHHH
Confidence 777 899999999999998655443
No 184
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.11 E-value=6e-05 Score=70.43 Aligned_cols=134 Identities=16% Similarity=0.130 Sum_probs=95.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|+++.--|.|.+ ++...+.+-|.+|+++++.-++.|=|-..
T Consensus 114 v~Ea~~Ai~~GAdEIDmViNig~lk~-------------------g~~~~v~~eI~~v~~a~~~~~lKVIlEt~------ 168 (260)
T 3r12_A 114 AHEAIFAVESGADEIDMVINVGMLKA-------------------KEWEYVYEDIRSVVESVKGKVVKVIIETC------ 168 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEEEEECCGG------
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcc-------------------ccHHHHHHHHHHHHHhcCCCcEEEEEeCC------
Confidence 66778899999999999976665443 24567888899999998743443322211
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
..+.++-...|+...++|+|||-.+.+. . ......+.++.+++.++ ++|-++||+ |.++|.++|+.| ++-
T Consensus 169 --~Lt~eei~~A~~ia~eaGADfVKTSTGf-~---~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aG-A~R 241 (260)
T 3r12_A 169 --YLDTEEKIAACVISKLAGAHFVKTSTGF-G---TGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYG-ADR 241 (260)
T ss_dssp --GCCHHHHHHHHHHHHHTTCSEEECCCSS-S---SCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred --CCCHHHHHHHHHHHHHhCcCEEEcCCCC-C---CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-Cce
Confidence 2244666778888889999999876442 1 22345567777888775 679999999 999999999999 995
Q ss_pred EE--echHHhh
Q 015862 343 VV--YGRLFLA 351 (399)
Q Consensus 343 V~--~gR~~ia 351 (399)
++ .|+.++.
T Consensus 242 iGtS~g~~I~~ 252 (260)
T 3r12_A 242 IGTSSGVKIVQ 252 (260)
T ss_dssp EEESCHHHHHH
T ss_pred eecchHHHHHH
Confidence 54 4455443
No 185
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.11 E-value=1.9e-05 Score=71.14 Aligned_cols=127 Identities=18% Similarity=0.153 Sum_probs=78.8
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
+.+.++|+|+|-+|...+ . ..+.++++.+++. |. .+++-+... .+
T Consensus 71 ~~a~~~Gad~v~vh~~~~--------------------~-----~~~~~~~~~~~~~-g~-~~gv~~~s~--------~~ 115 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSAD--------------------D-----STIAGAVKAAQAH-NK-GVVVDLIGI--------ED 115 (207)
T ss_dssp HHHHHTTCSEEEEETTSC--------------------H-----HHHHHHHHHHHHH-TC-EEEEECTTC--------SS
T ss_pred HHHHhCCCCEEEEeccCC--------------------h-----HHHHHHHHHHHHc-CC-ceEEEEecC--------CC
Confidence 567789999999996542 0 1233455555543 43 355544310 11
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEech
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 347 (399)
+.+ .++.+++.|+|++.+.... ..........+ +.+|+.. +.|+++.||++++++.++++.| +|+|.+||
T Consensus 116 p~~----~~~~~~~~g~d~v~~~~~~-~~~~~g~~~~~--~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-ad~vvvGs 187 (207)
T 3ajx_A 116 KAT----RAQEVRALGAKFVEMHAGL-DEQAKPGFDLN--GLLAAGEKARVPFSVAGGVKVATIPAVQKAG-AEVAVAGG 187 (207)
T ss_dssp HHH----HHHHHHHTTCSEEEEECCH-HHHTSTTCCTH--HHHHHHHHHTSCEEEESSCCGGGHHHHHHTT-CSEEEESH
T ss_pred hHH----HHHHHHHhCCCEEEEEecc-cccccCCCchH--HHHHHhhCCCCCEEEECCcCHHHHHHHHHcC-CCEEEEee
Confidence 222 2334455689998544321 11111111222 5566655 7899999999999999999998 99999999
Q ss_pred HHhhCCcHHHHH
Q 015862 348 LFLANPDLPRRF 359 (399)
Q Consensus 348 ~~iadPdl~~k~ 359 (399)
+++..+|..+.+
T Consensus 188 aI~~~~dp~~~~ 199 (207)
T 3ajx_A 188 AIYGAADPAAAA 199 (207)
T ss_dssp HHHTSSSHHHHH
T ss_pred eccCCCCHHHHH
Confidence 999987754443
No 186
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=98.11 E-value=3.9e-05 Score=75.90 Aligned_cols=118 Identities=10% Similarity=0.059 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh-CCC-ceEEEecCCcc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-GAD-RVGIRLSPFAN 261 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v-g~~-~v~vrls~~~~ 261 (399)
+.++.|+.+++.||..++|+.|.+ . .+.-++.+++||+++ |++ .|.|..|.
T Consensus 153 ~~~~~a~~~~~~G~~~~KiKvg~~--------------------~----~~~di~~v~~vr~a~~g~~~~l~vDaN~--- 205 (376)
T 4h2h_A 153 EAARQALEKQREGYSRLQVKLGAR--------------------P----IEIDIEAIRKVWEAVRGTGIALAADGNR--- 205 (376)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTSCCEEEEECTT---
T ss_pred HHHHHHHHHHhcCceEEEEecCCC--------------------C----HHHHHHHHHHHHhhccCCeeEEEEeecc---
Confidence 345667778889999999987641 1 123378899999998 766 46665554
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.++ |++ +|. +..+..+.+++.+++||++...+ +.+++.++++.+.+
T Consensus 206 ------~~~~~~A~~~~~~l~~~~~-~iE--eP~--------~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~ 268 (376)
T 4h2h_A 206 ------GWTTRDALRFSRECPDIPF-VME--QPC--------NSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLV 268 (376)
T ss_dssp ------CCCHHHHHHHHHHCTTSCE-EEE--SCS--------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHhhccc-ccc--CCc--------chhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhcc
Confidence 3357889999999998876 655 442 12456778999999999888888 89999999999999
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 269 d~v~~ 273 (376)
T 4h2h_A 269 DGFGM 273 (376)
T ss_dssp SEECC
T ss_pred Ccccc
Confidence 98754
No 187
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.10 E-value=6.1e-06 Score=77.71 Aligned_cols=83 Identities=10% Similarity=-0.078 Sum_probs=64.8
Q ss_pred HHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc----CCcEEEeCCC-CHHHHHHHHHcC-CCcEEEechHH
Q 015862 276 YMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF----KGTFLVAGGY-DREDGNKAIAEG-RADLVVYGRLF 349 (399)
Q Consensus 276 ~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~----~~pvi~~Ggi-t~~~a~~~L~~G-~~D~V~~gR~~ 349 (399)
++++.++++ ++.+-++..+....... ++++.++.+++.+ ++|||++||+ |++++.++++.+ .+|.|++||++
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G-~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGG-IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CC-CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCC-CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 688999999 99998876654333333 4788999999999 9999999999 999999999873 39999999996
Q ss_pred --hhCC-cHHHHHH
Q 015862 350 --LANP-DLPRRFE 360 (399)
Q Consensus 350 --iadP-dl~~k~~ 360 (399)
+..| ..+..++
T Consensus 240 ~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 240 DIFGGNLVKFEDCC 253 (260)
T ss_dssp GGGTCSSBCHHHHH
T ss_pred HHcCCCCCCHHHHH
Confidence 8888 6665554
No 188
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=98.10 E-value=3.3e-05 Score=76.86 Aligned_cols=118 Identities=15% Similarity=0.169 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+++++.|+.+++.||..++|+.+- ..| .+.|++||+++ ++ .|.|..|.
T Consensus 151 e~~~~~~~~~~~~G~~~~K~Kv~~--------------~~d-------------~~~v~avR~~~-~~~~l~vDaN~--- 199 (388)
T 3qld_A 151 DVLIQSVDAAVEQGFRRVKLKIAP--------------GRD-------------RAAIKAVRLRY-PDLAIAADANG--- 199 (388)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBT--------------TBS-------------HHHHHHHHHHC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCc--------------HHH-------------HHHHHHHHHHC-CCCeEEEECCC---
Confidence 556777888888999999999642 112 68899999999 55 35555443
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.+++.. ++.|++.++.|++ +|. .....+..+.+++.+++||++...+ +++++.++++.+.+
T Consensus 200 ------~~~~~~A~~-~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~ 264 (388)
T 3qld_A 200 ------SYRPEDAPV-LRQLDAYDLQFIE--QPL------PEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAA 264 (388)
T ss_dssp ------CCCGGGHHH-HHHGGGGCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCChHHHHH-HHHHhhCCCcEEE--CCC------CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 223445665 7899999999888 552 1224567788999999999988888 89999999999999
Q ss_pred cEEEec
Q 015862 341 DLVVYG 346 (399)
Q Consensus 341 D~V~~g 346 (399)
|+|.+=
T Consensus 265 d~v~~k 270 (388)
T 3qld_A 265 RVLNVK 270 (388)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 998764
No 189
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.10 E-value=3.9e-05 Score=73.74 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=45.9
Q ss_pred CchhhHHHHhhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCc---HHHHHHh
Q 015862 305 CPHSLLPMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRLFLANPD---LPRRFEL 361 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPd---l~~k~~~ 361 (399)
.++.++.+++.+++||+ ++||+ |++++.++++.| +|.|++||+++..++ ...++++
T Consensus 195 ~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~G-adgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 195 PYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLG-ADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp CHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTT-CSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcC-CCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 45677788888889988 99999 999999999988 999999999997554 3444444
No 190
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.08 E-value=3.6e-05 Score=70.26 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=57.3
Q ss_pred hhhhhCceEEEEeC--CCccccc-ccCCCchhhHHHHhhcC-CcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcH
Q 015862 280 SLNKYGILYCHMVE--PRMKTRE-EKSECPHSLLPMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 280 ~Le~~Gvd~l~v~~--~~~~~~~-~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl 355 (399)
...+.|+||+-++. ++..... .....++.++.+++.++ +||++.||++++++.++++.| +|.|.+|++++..+|.
T Consensus 131 ~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~ 209 (227)
T 2tps_A 131 QAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAG-ADGVSMISAISQAEDP 209 (227)
T ss_dssp HHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTT-CSEEEESHHHHTSSCH
T ss_pred HHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcC-CCEEEEhHHhhcCCCH
Confidence 34567999998632 1111111 12234677888888888 999999999999999999887 9999999999986664
Q ss_pred HHHH
Q 015862 356 PRRF 359 (399)
Q Consensus 356 ~~k~ 359 (399)
.+++
T Consensus 210 ~~~~ 213 (227)
T 2tps_A 210 ESAA 213 (227)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3433
No 191
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.07 E-value=7.4e-05 Score=70.28 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhh----------hhHHHHHHHHHHHHHhCCCceE
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLEN----------RCRFALEIVEAVSNEIGADRVG 253 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslen----------R~r~~~eii~avR~~vg~~~v~ 253 (399)
...+.|+...++|+|+|||.... ..|. -| |-.+.+ +.+-.++++++||+.++.-|+.
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~-------sdP~----ad--gp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~ 98 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPF-------SDPV----AD--GPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFL 98 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC-------SCCT----TS--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCC-------CCcc----cc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEE
Confidence 45777888899999999995422 1121 11 211111 2345789999999997434654
Q ss_pred E--EecCC-----c---------ccCCC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-c----------------
Q 015862 254 I--RLSPF-----A---------NYMES-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-R---------------- 299 (399)
Q Consensus 254 v--rls~~-----~---------~~~~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~---------------- 299 (399)
+ -.++. + ...+. -.+.+.++...+++.+.+.|++.+.+..+.... .
T Consensus 99 ~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs 178 (262)
T 2ekc_A 99 LMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVS 178 (262)
T ss_dssp EECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEES
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 4 22210 0 00110 113345667777777888887766554443110 0
Q ss_pred -----cccCC-----CchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 300 -----EEKSE-----CPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 300 -----~~~~~-----~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
....+ ..++++.+|+.+++||++++|+ |++++.+ +..| +|.|.+|++++..
T Consensus 179 ~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~g-ADgvIVGSai~~~ 240 (262)
T 2ekc_A 179 VTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSF-ADGVVVGSALVKL 240 (262)
T ss_dssp SCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTT-SSEEEECHHHHHH
T ss_pred cCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcC-CCEEEECHHHHhh
Confidence 00011 1256788999889999999999 7999999 7887 9999999999864
No 192
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.07 E-value=9.3e-05 Score=68.77 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=91.9
Q ss_pred HHHHHHHHHHH-h-CCCEEEE--ccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE-EecC
Q 015862 184 DFRLAARNAIE-A-GFDGVEL--HGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI-RLSP 258 (399)
Q Consensus 184 ~f~~aA~~a~~-a-GfDgVeI--h~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v-rls~ 258 (399)
+=+..|+.|+| + |-|-|+| ++-+-||+. -..+.+++.++.+...+..+ -...
T Consensus 88 eAv~~a~lare~~~~~~~iKlEv~~d~~~llp-----------------------D~~~tv~aa~~L~~~Gf~Vlpy~~d 144 (265)
T 1wv2_A 88 EAVRTCRLARELLDGHNLVKLEVLADQKTLFP-----------------------NVVETLKAAEQLVKDGFDVMVYTSD 144 (265)
T ss_dssp HHHHHHHHHHTTTTSCCEEEECCBSCTTTCCB-----------------------CHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCCeEEEEeecCccccCc-----------------------CHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44788888988 4 6777654 444433322 13678888888876554333 2322
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHc
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
...++++|++.|++++.-.....+. .....+.++++.|++..++|||+.||| ||+++..+++-
T Consensus 145 ---------------d~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeL 208 (265)
T 1wv2_A 145 ---------------DPIIARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMEL 208 (265)
T ss_dssp ---------------CHHHHHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHhCCCEEEeCCccCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHc
Confidence 1458999999999998542221111 112235678899999999999999999 99999999999
Q ss_pred CCCcEEEechHHhh--CCc
Q 015862 338 GRADLVVYGRLFLA--NPD 354 (399)
Q Consensus 338 G~~D~V~~gR~~ia--dPd 354 (399)
| ||.|.+|.++.. ||.
T Consensus 209 G-AdgVlVgSAI~~a~dP~ 226 (265)
T 1wv2_A 209 G-CEAVLMNTAIAHAKDPV 226 (265)
T ss_dssp T-CSEEEESHHHHTSSSHH
T ss_pred C-CCEEEEChHHhCCCCHH
Confidence 8 999999999965 564
No 193
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=98.05 E-value=3.5e-05 Score=78.00 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=89.5
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCCh
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNP 270 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~ 270 (399)
+++.||..++|+.+.+ |. .| ....+--.+.|++||+++|++ .|.|..|. ..+
T Consensus 176 ~~~~Gf~~~KlKv~~~--------~~-------~G---~~~~~~di~rv~avRea~G~d~~L~vDaN~---------~wt 228 (455)
T 3fxg_A 176 AKAMGFWGGKVPLPFC--------PD-------DG---HEGLRKNVEFLRKHREAVGPDFPIMVDCYM---------SLN 228 (455)
T ss_dssp HHHHTCSCEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSCEEEECTT---------CCC
T ss_pred HHHcCCCEEEEcCCCC--------cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEEeCCC---------CCC
Confidence 4678999999987542 10 01 123455688999999999987 57776664 335
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.++++++++.|+++++.|++ +|. .+...+..+.+++.++ +||++...+ ++.++.++++.+.+|+|-+
T Consensus 229 ~~~Ai~~~~~Le~~~l~~iE--EPl------~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~ 297 (455)
T 3fxg_A 229 VSYTIELVKACLDLNINWWE--ECL------SPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp HHHHHHHHHHTGGGCCSEEE--CCS------CGGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECC
T ss_pred HHHHHHHHHhcccCCcceec--CCC------CcchHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEE
Confidence 77899999999999999988 552 1224567788988875 777777777 8999999999999998875
No 194
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=98.04 E-value=1.5e-05 Score=78.85 Aligned_cols=122 Identities=5% Similarity=0.050 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC-CC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG-AD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg-~~-~v~vrls~~~ 260 (399)
+.+++.|+.+.+.||..++|+.|.. + .+-.++.|++||+++| ++ .|.+..+.
T Consensus 164 e~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avr~~~g~~~~~l~vDaN~-- 217 (377)
T 2pge_A 164 AFMQEQIEAKLAEGYGCLKLKIGAI--------------------D----FDKECALLAGIRESFSPQQLEIRVDANG-- 217 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-----------------------C----HHHHHHHHHHHHHHSCTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhhhhheeecCCC--------------------C----hHHHHHHHHHHHHHcCCCCceEEEECCC--
Confidence 3455677888889999999985420 1 3445799999999998 76 46665554
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHH--HHHHHHc
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DRED--GNKAIAE 337 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~--a~~~L~~ 337 (399)
..+.++++++++.|+++++.||+ +|. ....++..+.+++.+++||++...+ |..+ +.++++.
T Consensus 218 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~ 282 (377)
T 2pge_A 218 -------AFSPANAPQRLKRLSQFHLHSIE--QPI------RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDA 282 (377)
T ss_dssp -------BBCTTTHHHHHHHHHTTCCSEEE--CCB------CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHH
T ss_pred -------CCCHHHHHHHHHHHhcCCCcEEE--ccC------CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHh
Confidence 12345678899999999999988 542 1234567788999999999888887 7666 7799999
Q ss_pred CCCcEEEe
Q 015862 338 GRADLVVY 345 (399)
Q Consensus 338 G~~D~V~~ 345 (399)
+.+|+|.+
T Consensus 283 ~a~d~i~i 290 (377)
T 2pge_A 283 IRPQYIIL 290 (377)
T ss_dssp HCCSEEEE
T ss_pred CCCCEEEE
Confidence 99998876
No 195
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=98.04 E-value=4.5e-05 Score=75.73 Aligned_cols=116 Identities=15% Similarity=0.165 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCccc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANY 262 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~ 262 (399)
++++.|+++.+.||..++|+.+ | ..| .+.+++||+++ ++ .|.+..|.
T Consensus 164 ~~~~~a~~~~~~G~~~~KiKvg----------~----~~d-------------~~~v~avr~a~-~~~~l~vDaN~---- 211 (386)
T 1wue_A 164 QLLKQVQLAVEKGYQRVKLKIR----------P----GYD-------------VEPVALIRQHF-PNLPLMVDANS---- 211 (386)
T ss_dssp HHHHHHHHHHHTTCSCEEEECB----------T----TBS-------------HHHHHHHHHHC-TTSCEEEECTT----
T ss_pred HHHHHHHHHHHhhhheEEEeeC----------c----HHH-------------HHHHHHHHHhC-CCCeEEEeCCC----
Confidence 3456777888899999999853 1 111 67799999998 44 46665553
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 263 MESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
..+.+++ ++++.|+++++.||+ +|. ....++..+.+++.+++||++...+ +++++.++++.+.+|
T Consensus 212 -----~~~~~~a-~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d 277 (386)
T 1wue_A 212 -----AYTLADL-PQLQRLDHYQLAMIE--QPF------AADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCR 277 (386)
T ss_dssp -----CCCGGGH-HHHHGGGGSCCSCEE--CCS------CTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred -----CCCHHHH-HHHHHHHhCCCeEEe--CCC------CcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCC
Confidence 1234556 789999999999988 542 1234567788999999999988888 899999999999999
Q ss_pred EEEe
Q 015862 342 LVVY 345 (399)
Q Consensus 342 ~V~~ 345 (399)
+|.+
T Consensus 278 ~i~i 281 (386)
T 1wue_A 278 SINL 281 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 196
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.04 E-value=8.1e-05 Score=68.20 Aligned_cols=134 Identities=17% Similarity=0.117 Sum_probs=94.6
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|+++.--|.|.+ .+...+.+-|.+|+++++.. .+|+=....
T Consensus 74 ~~e~~~Ai~~GAdevd~vinig~~~~-------------------g~~~~v~~ei~~v~~a~~~~--~lkvIlet~---- 128 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVLHLGRAKA-------------------GDLDYLEAEVRAVREAVPQA--VLKVILETG---- 128 (220)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHSTTS--EEEEECCGG----
T ss_pred HHHHHHHHHcCCCEEEecccchhhhC-------------------CCHHHHHHHHHHHHHHHcCC--CceEEEecC----
Confidence 56678899999999999976665443 23456788889999999642 444321110
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCc-
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRAD- 341 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D- 341 (399)
..+.++....|+...++|+|||-.+.+.. ......+..+.+++.+ ++||-+.||+ |.+++.++++.| ++
T Consensus 129 --~l~~e~i~~a~~ia~eaGADfVKTsTGf~----~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aG-a~R 201 (220)
T 1ub3_A 129 --YFSPEEIARLAEAAIRGGADFLKTSTGFG----PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAG-ASR 201 (220)
T ss_dssp --GSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred --CCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCC-Ccc
Confidence 12346677788888899999998664321 1223445677777755 4789999999 999999999998 99
Q ss_pred -EEEechHHhh
Q 015862 342 -LVVYGRLFLA 351 (399)
Q Consensus 342 -~V~~gR~~ia 351 (399)
.++.+|.++.
T Consensus 202 iG~S~g~~I~~ 212 (220)
T 1ub3_A 202 LGTSSGVALVA 212 (220)
T ss_dssp EEETTHHHHHC
T ss_pred cchhHHHHHHH
Confidence 6666666554
No 197
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.03 E-value=1e-05 Score=75.94 Aligned_cols=85 Identities=14% Similarity=0.026 Sum_probs=59.1
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.++++.+++.|+++|-++......... ...++.++.+++.+++||+++||+ +++++.++++.| ||.|++|++++..|
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~G-adgv~vgsal~~~~ 236 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFRE 236 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCS-CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESTTTC---
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcC-CCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcC-CHHHHccHHHHcCC
Confidence 457777888999998876433221111 235678889999999999999999 799999999887 99999999999999
Q ss_pred cHHHHHHh
Q 015862 354 DLPRRFEL 361 (399)
Q Consensus 354 dl~~k~~~ 361 (399)
+.+.++++
T Consensus 237 ~~~~~~~~ 244 (266)
T 2w6r_A 237 IDMRELKE 244 (266)
T ss_dssp --------
T ss_pred CCHHHHHH
Confidence 87777655
No 198
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.03 E-value=6.1e-05 Score=69.33 Aligned_cols=136 Identities=13% Similarity=0.090 Sum_probs=94.2
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|+++.--|+|.+ .+...+.+-|.+|+++++..++.|=|-.. .+.
T Consensus 83 ~~E~~~Ai~~GAdEIDmVinig~lk~-------------------g~~~~v~~ei~~v~~a~~~~~lKvIiEt~-~L~-- 140 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVIDVGAALA-------------------GDLDAVSADITAVRKAVRAATLKVIVESA-ALL-- 140 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEEEEECCHH-HHH--
T ss_pred HHHHHHHHHcCCCEEEEEeehHhhhc-------------------ccHHHHHHHHHHHHHHccCCceEEEEECc-ccC--
Confidence 66778899999999999977665443 23567888999999999743333222110 110
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
+..+.++-...|+...++|+|||-.+.+... ......+.++.+|+.++ ++|-++||+ |.+++.++|+.| ++-
T Consensus 141 -~~~t~eei~~a~~ia~~aGADfVKTSTGf~~---~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aG-a~R 215 (231)
T 3ndo_A 141 -EFSGEPLLADVCRVARDAGADFVKTSTGFHP---SGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAG-ATR 215 (231)
T ss_dssp -HHTCHHHHHHHHHHHHHTTCSEEECCCSCCT---TCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred -CCCCHHHHHHHHHHHHHHCcCEEEcCCCCCC---CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhc-chh
Confidence 0013456677888888999999987654210 12334567777888774 679999999 999999999999 995
Q ss_pred EEechH
Q 015862 343 VVYGRL 348 (399)
Q Consensus 343 V~~gR~ 348 (399)
++..++
T Consensus 216 iGtS~g 221 (231)
T 3ndo_A 216 LGLSGS 221 (231)
T ss_dssp EEESSH
T ss_pred cccchH
Confidence 555443
No 199
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.02 E-value=4.1e-05 Score=69.10 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=57.5
Q ss_pred hhhhCceEEEEeCC--CcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHH
Q 015862 281 LNKYGILYCHMVEP--RMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 281 Le~~Gvd~l~v~~~--~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
..+.|+|++-+... ...........++.++.+++.+++||++.||++++++.++++.| +|.|.+|++++..||..++
T Consensus 124 ~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~ 202 (215)
T 1xi3_A 124 AEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTG-VDGIAVISAVMGAEDVRKA 202 (215)
T ss_dssp HHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTT-CSEEEESHHHHTSSSHHHH
T ss_pred HHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcC-CCEEEEhHHHhCCCCHHHH
Confidence 45679999987531 11111112234566778888889999999999999999998887 9999999999998876545
Q ss_pred HH
Q 015862 359 FE 360 (399)
Q Consensus 359 ~~ 360 (399)
++
T Consensus 203 ~~ 204 (215)
T 1xi3_A 203 TE 204 (215)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 200
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=98.02 E-value=4.1e-05 Score=77.63 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++ .||..++|+.|.. +. +--.+.|++||+++ ++ .|.|..|.
T Consensus 184 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~~v~avRea~-pd~~L~vDaN~-- 236 (450)
T 3mzn_A 184 EAVANLARAAYDRYGFKDFKLKGGVL--------------------RG----EEEADCIRALHEAF-PEARLALDPNG-- 236 (450)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECSSS--------------------CH----HHHHHHHHHHHHHC-TTSEEEEECTT--
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC--------------------CH----HHHHHHHHHHHHhC-CCCeEEEECCC--
Confidence 456777777777 6999999997641 11 12267899999997 44 45665554
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++. +.|++ +|.... ......+..+.+++.+++||++...+ +..++.++++.+.
T Consensus 237 -------~w~~~~A~~~~~~L~~~-i~~iE--eP~~~~--d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 304 (450)
T 3mzn_A 237 -------AWKLDEAVRVLEPIKHL-LSYAE--DPCGQE--GGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNS 304 (450)
T ss_dssp -------CBCHHHHHHHHGGGGGG-CSEEE--SSBCCB--TTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHhhhc-cceee--CCCCcc--cccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCC
Confidence 33578899999999998 88888 552110 00001356788999999999887666 7999999999999
Q ss_pred CcEEE
Q 015862 340 ADLVV 344 (399)
Q Consensus 340 ~D~V~ 344 (399)
+|++.
T Consensus 305 ~di~~ 309 (450)
T 3mzn_A 305 VDIPL 309 (450)
T ss_dssp CSEEB
T ss_pred CCEEE
Confidence 99874
No 201
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=98.00 E-value=3.4e-05 Score=78.64 Aligned_cols=124 Identities=14% Similarity=0.111 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 182 VNDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 182 i~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
.+++++.|+.+++ .||..++|+.|.. +++ --.+.|++||+++ ++ .|.|..|.
T Consensus 201 ~e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~rv~avRea~-pd~~L~vDaN~- 254 (470)
T 3p0w_A 201 PAAIARLAEAATERYGFADFKLKGGVM--------------------PGA----EEMEAIAAIKARF-PHARVTLDPNG- 254 (470)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECSSS--------------------CHH----HHHHHHHHHHHHC-TTSEEEEECTT-
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCC--------------------CHH----HHHHHHHHHHHhC-CCCeEEeeCCC-
Confidence 3456777888887 6999999997641 111 2267899999997 44 46665554
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
..+.++++++++.|++. +.||+ +|.... ......+..+.+++.+++||++...+ +..++.++++.+
T Consensus 255 --------~w~~~~Ai~~~~~Le~~-l~~iE--eP~~~~--d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~ 321 (470)
T 3p0w_A 255 --------AWSLNEAIALCKGQGHL-VAYAE--DPCGPE--AGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLH 321 (470)
T ss_dssp --------BBCHHHHHHHHTTCTTT-CSEEE--SCBCCB--TTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTT
T ss_pred --------CCCHHHHHHHHHhcccc-ceeec--CCCChh--hccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC
Confidence 23578899999999998 88888 552110 00000356788999999999887666 799999999999
Q ss_pred CCcEEE
Q 015862 339 RADLVV 344 (399)
Q Consensus 339 ~~D~V~ 344 (399)
.+|++-
T Consensus 322 a~div~ 327 (470)
T 3p0w_A 322 AVDIPL 327 (470)
T ss_dssp CCSEEB
T ss_pred CCCEEE
Confidence 999874
No 202
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=97.97 E-value=3.1e-05 Score=75.27 Aligned_cols=111 Identities=22% Similarity=0.275 Sum_probs=75.5
Q ss_pred HhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHH
Q 015862 194 EAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEA 272 (399)
Q Consensus 194 ~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~ 272 (399)
+.||..++|+.+.. |.+++ --.+.|++||+++|++ .|.|..|. ..+.+
T Consensus 90 ~~G~~~~KiKvg~~------------------g~~~~----~d~~~v~avR~~~G~~~~L~vDaN~---------~w~~~ 138 (327)
T 2opj_A 90 SSGCTTAKVKVAER------------------GQSEA----NDVARVEAVRDALGPRGRVRIDVNG---------AWDVD 138 (327)
T ss_dssp HHCCSEEEEECCC----------------------------CHHHHHHHHHHHHCTTSEEEEECTT---------CSCHH
T ss_pred HCCCCEEEEEeCCC------------------CCCHH----HHHHHHHHHHHHhCCCCEEEEECCC---------CCCHH
Confidence 57999999987630 11221 1268899999999976 46665554 33577
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
+++++++.|++.++.||+ +|. +..+..+.+++.+++||++...+ +..++.++++.+.+|+|.+
T Consensus 139 ~A~~~~~~L~~~~l~~iE--qP~--------~~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~i 202 (327)
T 2opj_A 139 TAVRMIRLLDRFELEYVE--QPC--------ATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVL 202 (327)
T ss_dssp HHHHHHHHHGGGCEEEEE--CCS--------SSHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEE
T ss_pred HHHHHHHHHHhcCCcEEe--CCC--------CCHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 899999999999999988 552 12456778999999999998888 8999999999999998876
No 203
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.96 E-value=0.00017 Score=66.48 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=41.7
Q ss_pred hHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 309 LLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 309 ~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
++.+|+.. +.++.+.||++++.+..+++.| +|.+.+||+++..+|..+.+
T Consensus 160 i~~lr~~~~~~~I~VdGGI~~~t~~~~~~aG-Ad~~VvGsaIf~a~dp~~~~ 210 (228)
T 3ovp_A 160 VHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG-ANMIVSGSAIMRSEDPRSVI 210 (228)
T ss_dssp HHHHHHHCTTCEEEEESSCSTTTHHHHHHHT-CCEEEESHHHHTCSCHHHHH
T ss_pred HHHHHHhcCCCCEEEeCCcCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHH
Confidence 55667665 4779999999999999999999 99999999999877765443
No 204
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=97.95 E-value=4.1e-05 Score=77.92 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=83.6
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChH
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPE 271 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~ 271 (399)
..+.||+.++|+.|.. +. +--.+.|++||+++|+..|.|..+. ..+.
T Consensus 214 ~~~~Gf~~~KlKvG~~--------------------~~----~~di~~v~avrea~pd~~L~vDaN~---------~wt~ 260 (464)
T 4g8t_A 214 YEKYGFNDFKLKGGVL--------------------DG----FEEAEAVTALAKRFPDARITLDPNG---------AWSL 260 (464)
T ss_dssp HHHHCCSCEEEECSSS--------------------CH----HHHHHHHHHHHHHSTTCCEEEECTT---------CBCH
T ss_pred HHHcCCCeEEEeCCCC--------------------CH----HHHHHHHHHHHhhCCCceEEEECCC---------ccCH
Confidence 3456999999997641 11 1236789999999985356665554 3367
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEE
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVV 344 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 344 (399)
++++++++.|++. +.|++ +|.... ......+..+.+++.+++||.+...+ +..++.++|+.+.+|++.
T Consensus 261 ~~Ai~~~~~le~~-l~wiE--eP~~~~--d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~ 329 (464)
T 4g8t_A 261 DEAVKIGKQLKGV-LAYAE--DPCGAE--QGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPL 329 (464)
T ss_dssp HHHHHHHHHTTTT-CSCEE--SCBCCB--TTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEB
T ss_pred HHHHHHHHHhhhc-cceee--cCcCcc--cccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEe
Confidence 8899999999887 88877 552110 11112355778999999999988888 899999999999999654
No 205
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=97.94 E-value=4.6e-05 Score=77.30 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCc
Q 015862 183 NDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFA 260 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~ 260 (399)
+++++.|+.+++ .||+.++|+.|.. +.+ --.+.|++||+++ ++ .|.|..|.
T Consensus 187 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~~v~avRea~-pd~~L~vDaN~-- 239 (455)
T 3pfr_A 187 QAVIELAAASKDRYGFKDFKLKGGVF--------------------EGS----KEIDTVIELKKHF-PDARITLDPNG-- 239 (455)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECSSS--------------------CHH----HHHHHHHHHHHHC-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCC--------------------CHH----HHHHHHHHHHHhC-CCCeEeecCCC--
Confidence 446677777776 6999999997541 111 1267899999997 44 46665554
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGR 339 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 339 (399)
..+.++++++++.|++. +.|++ +|.... ......+..+.+++.+++||++...+ +..++..+++.+.
T Consensus 240 -------~w~~~~A~~~~~~L~~~-l~~iE--eP~~~~--d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 307 (455)
T 3pfr_A 240 -------CWSLDEAIQLCKGLNDV-LTYAE--DPCIGE--NGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQS 307 (455)
T ss_dssp -------BSCHHHHHHHHTTCTTT-CSEEE--SCBCCB--TTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHhhccc-ceeee--cCCChh--hccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 33578899999999998 88888 552110 00001356788999999999887666 7899999999999
Q ss_pred CcEEE
Q 015862 340 ADLVV 344 (399)
Q Consensus 340 ~D~V~ 344 (399)
+|++.
T Consensus 308 ~di~~ 312 (455)
T 3pfr_A 308 VDIPL 312 (455)
T ss_dssp CSEEB
T ss_pred CCEEE
Confidence 99874
No 206
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.92 E-value=3.7e-05 Score=71.35 Aligned_cols=54 Identities=19% Similarity=0.285 Sum_probs=48.7
Q ss_pred CchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCc-HHHHHH
Q 015862 305 CPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPD-LPRRFE 360 (399)
Q Consensus 305 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPd-l~~k~~ 360 (399)
..+.++++++.+ ++||+++||| |+++++++++ | +|.|.+|.+++.+|+ ++++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-g-Ad~VIVGSa~v~~~~~~~~~v~ 225 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-H-ADVIVVGNAVYEDFDRALKTVA 225 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-T-CSEEEECTHHHHCHHHHHTHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-C-CCEEEEChHHHhCHHHHHHHHH
Confidence 456788899999 9999999999 8999999888 7 999999999999999 888865
No 207
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=97.88 E-value=0.00037 Score=66.62 Aligned_cols=49 Identities=22% Similarity=0.255 Sum_probs=41.6
Q ss_pred hhhHHHHhhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHH
Q 015862 307 HSLLPMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLP 356 (399)
Q Consensus 307 ~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~ 356 (399)
+.++.+++.+++||+ +.||+ |++++..+++.| +|.|.+|++++..+|..
T Consensus 197 ~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~G-AdgVlVGsai~~a~dp~ 248 (297)
T 4adt_A 197 DLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLG-MDGVFVGSGIFESENPQ 248 (297)
T ss_dssp HHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTT-CSCEEESHHHHTSSCHH
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcC-CCEEEEhHHHHcCCCHH
Confidence 456677888888865 89999 999999999998 99999999999866543
No 208
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.86 E-value=0.00018 Score=68.00 Aligned_cols=154 Identities=15% Similarity=0.180 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhh----------hhHHHHHHHHHHHHH-hCCCc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLEN----------RCRFALEIVEAVSNE-IGADR 251 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslen----------R~r~~~eii~avR~~-vg~~~ 251 (399)
+.+.+.++...++|+|.|||-... -.|.. | |-.+++ +.+-++++++++|+. +. -|
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiPf-------SDP~a----D--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~-~P 99 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMPF-------SDPLA----D--GPTIQGANLRALAAKTTPDICFELIAQIRARNPE-TP 99 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCC-------CCGGG----C--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-SC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-------CCCCC----C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC-CC
Confidence 446788888899999999988543 22221 2 444443 134678999999987 42 25
Q ss_pred eEEE--ecCC-----ccc---------CCC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-------------cc-
Q 015862 252 VGIR--LSPF-----ANY---------MES-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-------------RE- 300 (399)
Q Consensus 252 v~vr--ls~~-----~~~---------~~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-------------~~- 300 (399)
|.+- .|+. +.| .+. -.+.+.++..++.+.+.+.|++.+.+..+.-.. .+
T Consensus 100 ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYL 179 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEE
Confidence 4331 2220 000 000 112344555666777777777776655443210 00
Q ss_pred ------ccC------CCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 301 ------EKS------ECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 301 ------~~~------~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
... ...+.++.+|+.++.||++++|+ |++++.+.++.| +|.|.+|.+++.
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~g-ADgvIVGSAiv~ 242 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAG-AAGAISGSAVVK 242 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEESHHHHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 000 01245778999899999999999 899999999998 999999999874
No 209
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.85 E-value=0.00014 Score=68.57 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=40.4
Q ss_pred chhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 306 PHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
.+.++.+|+.++.||++.||+ |++++.+++..| +|.|.+|.+++.
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~ag-AD~vVVGSai~~ 239 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAG-AAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 357788999889999999999 699999999998 999999999864
No 210
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.85 E-value=0.00027 Score=67.83 Aligned_cols=145 Identities=19% Similarity=0.188 Sum_probs=87.1
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
.++.|.++|+|+|.+++-. |.|. +-....+.+.+++++.++. | -++.+-+-+... ..+.
T Consensus 113 ~ve~a~~~GAdaV~vlv~~--------------~~d~---~~~~~~~~i~~v~~~~~~~-G-~p~lv~~~~~g~--~v~~ 171 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLW--------------RSDE---DAQQRLNMVKEFNELCHSN-G-LLSIIEPVVRPP--RCGD 171 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEE--------------CTTS---CHHHHHHHHHHHHHHHHTT-T-CEEEEEEEECCC--SSCS
T ss_pred hHHHHHHcCCCEEEEEEEc--------------CCCc---cHHHHHHHHHHHHHHHHHc-C-CcEEEEEECCCC--cccc
Confidence 3567788999999987533 2110 0122233444444444332 2 155555432111 1111
Q ss_pred CChH-HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh----cCCc-EEEeCCCCH----HHHHHHHHc
Q 015862 268 SNPE-ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA----FKGT-FLVAGGYDR----EDGNKAIAE 337 (399)
Q Consensus 268 ~~~~-~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~----~~~p-vi~~Ggit~----~~a~~~L~~ 337 (399)
.... +...+.++.+.+.|+||+-+..+... ...++.+..+.+. +++| |++.||++. +.+..+++.
T Consensus 172 ~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~-----~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~a 246 (304)
T 1to3_A 172 KFDREQAIIDAAKELGDSGADLYKVEMPLYG-----KGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEA 246 (304)
T ss_dssp CCCHHHHHHHHHHHHTTSSCSEEEECCGGGG-----CSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEeCCCcCC-----CCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHc
Confidence 2223 44556688888999999988654221 0133444445555 7899 999999965 557888888
Q ss_pred CCCcEEEechHHhhC----CcHHHHH
Q 015862 338 GRADLVVYGRLFLAN----PDLPRRF 359 (399)
Q Consensus 338 G~~D~V~~gR~~iad----Pdl~~k~ 359 (399)
| ++.|.+||.+... +|....+
T Consensus 247 G-a~Gv~vGRaI~q~~~~~~dp~~~~ 271 (304)
T 1to3_A 247 G-ASGFLAGRAVWSSVIGLPDTELML 271 (304)
T ss_dssp T-CCEEEESHHHHGGGTTCSCHHHHH
T ss_pred C-CeEEEEehHHhCccccCCCHHHHH
Confidence 7 9999999999988 7664444
No 211
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.83 E-value=3.2e-05 Score=72.47 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=68.8
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh-h
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFL-A 351 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~i-a 351 (399)
..++++.+++.|++.|+++....... ......+.++.+++.+++||++.|++ ++++++.+++.| +|.|.+|+.++ .
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~G-ad~v~lg~~~~~~ 109 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADKALAASVFHFR 109 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHT-CSEEECCCCC---
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CcHhhhhHHHHhC
Confidence 56789999999999999976543211 12235678888999999999999999 899999999998 99999999999 5
Q ss_pred --CCcHHHHHHhC
Q 015862 352 --NPDLPRRFELN 362 (399)
Q Consensus 352 --dPdl~~k~~~g 362 (399)
+|+++.++.+.
T Consensus 110 ~~~~~~~~~~~~~ 122 (266)
T 2w6r_A 110 EIDMRELKEYLKK 122 (266)
T ss_dssp ---CHHHHHHCC-
T ss_pred CCCHHHHHHHHHH
Confidence 99999998643
No 212
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.82 E-value=0.00022 Score=65.78 Aligned_cols=133 Identities=13% Similarity=0.041 Sum_probs=89.4
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|+++.--|.+.+ .+.+-|.+|+++++...+-+|+=....
T Consensus 91 ~~e~~~Av~~GAdEID~vinig~~~~-----------------------~v~~ei~~v~~a~~~~g~~lKvIlEt~---- 143 (234)
T 1n7k_A 91 LVEAQTVLEAGATELDVVPHLSLGPE-----------------------AVYREVSGIVKLAKSYGAVVKVILEAP---- 143 (234)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGCHH-----------------------HHHHHHHHHHHHHHHTTCEEEEECCGG----
T ss_pred HHHHHHHHHcCCCEEEEeccchHHHH-----------------------HHHHHHHHHHHHHhhcCCeEEEEEecc----
Confidence 56678899999999999965543222 457777888888853212223322111
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHH--HHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc-
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLP--MRKAFKGTFLVAGGY-DREDGNKAIAEGRAD- 341 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~--ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D- 341 (399)
..+.++....|+...++|+|||-.+.+... ......+..+. +++.+++||-+.||+ |.+++.++++.| ++
T Consensus 144 --~L~~e~i~~a~ria~eaGADfVKTsTG~~~---~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aG-a~R 217 (234)
T 1n7k_A 144 --LWDDKTLSLLVDSSRRAGADIVKTSTGVYT---KGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAG-ADI 217 (234)
T ss_dssp --GSCHHHHHHHHHHHHHTTCSEEESCCSSSC---CCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred --CCCHHHHHHHHHHHHHhCCCEEEeCCCCCC---CCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcC-ccc
Confidence 113466777888888999999986543210 01223345556 788777999999999 899999999998 99
Q ss_pred -EEEechHHhh
Q 015862 342 -LVVYGRLFLA 351 (399)
Q Consensus 342 -~V~~gR~~ia 351 (399)
.++.+|.++.
T Consensus 218 iG~S~g~~I~~ 228 (234)
T 1n7k_A 218 IGTSSAVKVLE 228 (234)
T ss_dssp EEETTHHHHHH
T ss_pred cchHHHHHHHH
Confidence 6666666553
No 213
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.81 E-value=0.00022 Score=73.18 Aligned_cols=127 Identities=19% Similarity=0.197 Sum_probs=83.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCC-CceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGA-DRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~-~~v~vrls~~~~~~~ 264 (399)
.+.+..++++|.+.+.|+..+|+ .....+.++.+|+..+. .+|.+.--.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~------------------------~~~~~~~i~~lk~~~~~~~~Vi~G~V~------ 293 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGF------------------------SEWQKITIGWIREKYGDKVKVGAGNIV------ 293 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCC------------------------SHHHHHHHHHHHHHHGGGSCEEEEEEC------
T ss_pred HHHHHHHHhhhccceEEecccCc------------------------ccchhhHHHHHHHhCCCCceEeecccc------
Confidence 34466777889999999877641 12357778999998754 355542211
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCC--cc-ccc---ccCCCchhhHHHHhh---c------CCcEEEeCCC-CH
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPR--MK-TRE---EKSECPHSLLPMRKA---F------KGTFLVAGGY-DR 328 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~--~~-~~~---~~~~~~~~~~~ir~~---~------~~pvi~~Ggi-t~ 328 (399)
+. +-++.|.++|+|++.+..+. .. ... ...+....+..+.++ + ++|||+.||+ ++
T Consensus 294 -----t~----~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~ 364 (503)
T 1me8_A 294 -----DG----EGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYD 364 (503)
T ss_dssp -----SH----HHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSH
T ss_pred -----CH----HHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCH
Confidence 12 24556778899999873311 10 000 112222333344333 2 6999999999 99
Q ss_pred HHHHHHHHcCCCcEEEechHHhhC
Q 015862 329 EDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 329 ~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
.++.++|+-| ||+|+|||+++.-
T Consensus 365 ~di~kAlalG-A~~V~iG~~~~~~ 387 (503)
T 1me8_A 365 YHMTLALAMG-ADFIMLGRYFARF 387 (503)
T ss_dssp HHHHHHHHTT-CSEEEESHHHHTB
T ss_pred HHHHHHHHcC-CCEEEECchhhcc
Confidence 9999999999 9999999999753
No 214
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.81 E-value=6.7e-05 Score=70.68 Aligned_cols=242 Identities=15% Similarity=0.057 Sum_probs=140.1
Q ss_pred CccCCCccccCCeeeCCceeeCCCCCCCCCCCCCCHHHHHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHh
Q 015862 29 VILFLTPYKMGNFNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVE 107 (399)
Q Consensus 29 ~~~Lf~P~~ig~~~lkNRiv~apm~~~~~~~G~~t~~~~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~ 107 (399)
.+.||.|-++-..-++.-=.++. ..-+|-...+...+....... |.-.|+++...|+ .+-+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~---liDPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt---------------~~~~ 82 (286)
T 3vk5_A 21 APPLWRPGRVLARLREHQPGPVH---IIDPFKVPVTEAVEKAAELTRLGFAAVLLASTDYE---------------SFES 82 (286)
T ss_dssp CCCTTSCCHHHHHHHHSCCEEEE---EECTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCS---------------SHHH
T ss_pred CCCccCchHHHHHHHhccCCceE---EECCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCC---------------cchH
Confidence 36688886664322222000111 111344455665666666665 7777777722222 1234
Q ss_pred hhHHHHHHHHH-cCCeEEE-ecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHH-
Q 015862 108 AWKPIVDAVHA-KGGIFFC-QIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVND- 184 (399)
Q Consensus 108 ~~~~l~~~vh~-~g~~i~~-QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~- 184 (399)
.+.+++++|++ ++.++++ --=|.|... .++|.. +. ...|.-|+..+...++..
T Consensus 83 ~~~~~v~~ik~~~~lPvil~fPP~~g~~~----------~i~~~a---------Da-----~l~psvlNs~n~~~i~g~~ 138 (286)
T 3vk5_A 83 HMEPYVAAVKAATPLPVVLHFPPRPGAGF----------PVVRGA---------DA-----LLLPALLGSGDDYFVWKSF 138 (286)
T ss_dssp HHHHHHHHHHHHCSSCEEEECCCBTTTBS----------CCCTTC---------SE-----EEEEEETTBSSHHHHTHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCcc----------ccccCC---------CE-----EEEEEEecCCCcccccCcH
Confidence 67888999999 6767765 332222110 122211 11 113445777788888888
Q ss_pred -HHHHHHHH----HHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCC
Q 015862 185 -FRLAARNA----IEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPF 259 (399)
Q Consensus 185 -f~~aA~~a----~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~ 259 (399)
...+|... ++.| |+- .-|||+- | +| | +.|.. ++ ....
T Consensus 139 ~~~~aa~~v~~~~~~~g----e~i-p~gYL~v-------~------~g----~--------k~V~f-v~-------~~~~ 180 (286)
T 3vk5_A 139 LETLAAFPGRIPREEWP----ELL-LTVALTF-------G------ED----P--------RTGDL-LG-------TVPV 180 (286)
T ss_dssp HHHHHHCSTTSCGGGCC----EEE-EEEEEEC-------S------CC----H--------HHHHH-HC-------BCCC
T ss_pred HHHHHhHHHHHHHHHhC----Ccc-eEEEEEE-------C------CC----C--------ceeee-eC-------CCCC
Confidence 66676666 6666 543 4567653 0 11 1 12211 11 0110
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
+.. ...+....+..-+..|+.++.+.... .....+.++.+++.+ .+||+++||| |+++++++++
T Consensus 181 ------~~~-e~A~~~aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~ 247 (286)
T 3vk5_A 181 ------STA-STEEIDRYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLD 247 (286)
T ss_dssp ------CCS-SSHHHHHHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHH
T ss_pred ------CCH-HHHHHHHHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHH
Confidence 011 12211344444567787776654321 233567899999999 8999999999 9999999999
Q ss_pred cCCCcEEEechHHhhC--CcHHHHHHhCCC
Q 015862 337 EGRADLVVYGRLFLAN--PDLPRRFELNAP 364 (399)
Q Consensus 337 ~G~~D~V~~gR~~iad--Pdl~~k~~~g~~ 364 (399)
.| +|.|.+|.+++.| |++++++..-.|
T Consensus 248 aG-AD~VVVGSAav~d~~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 248 SG-ADYVGFAGALEQPDWRSALAEIAGRRP 276 (286)
T ss_dssp TT-CSEEEESGGGSSTTHHHHHHHHHC---
T ss_pred cC-CCEEEECchhhcCCCHHHHHHHHHhCC
Confidence 99 9999999999999 888888875443
No 215
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.81 E-value=0.00042 Score=70.71 Aligned_cols=130 Identities=18% Similarity=0.115 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
+..+-|....+||.|.|-|..+||| .+.+++.++.||+..++-+|.. =|.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGh------------------------s~~v~~~i~~ik~~~p~~~via-GNV----- 330 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGN------------------------SVYQIEFIKWIKQTYPKIDVIA-GNV----- 330 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCC------------------------SHHHHHHHHHHHHHCTTSEEEE-EEE-----
T ss_pred cHHHHHHHHHhcCCcEEEEeccccc------------------------cHHHHHHHHHHHhhCCcceEEe-ccc-----
Confidence 3455667778999999999999974 2456899999999875433332 011
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCC---cccc---cccCCCchh---hHHHHhhcCCcEEEeCCC-CHHHHHH
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPR---MKTR---EEKSECPHS---LLPMRKAFKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~---~~~~---~~~~~~~~~---~~~ir~~~~~pvi~~Ggi-t~~~a~~ 333 (399)
-+ .+.++.|.++|+|.+-|.-+. +... .-..+.... +..+.+.+++|||+-||+ ++-++.+
T Consensus 331 -----aT----~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~K 401 (556)
T 4af0_A 331 -----VT----REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAK 401 (556)
T ss_dssp -----CS----HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred -----cC----HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHH
Confidence 12 335666778999999875332 1111 111222222 233445578999999999 8999999
Q ss_pred HHHcCCCcEEEechHHhhCC
Q 015862 334 AIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadP 353 (399)
+|..| +|+||||..|-.--
T Consensus 402 AlaaG-Ad~VMlGsllAGt~ 420 (556)
T 4af0_A 402 ALALG-ASAVMMGGLLAGTT 420 (556)
T ss_dssp HHHTT-CSEEEESTTTTTBT
T ss_pred HhhcC-CCEEEEchhhcccc
Confidence 99999 99999999876433
No 216
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.78 E-value=7.3e-05 Score=68.92 Aligned_cols=129 Identities=17% Similarity=0.247 Sum_probs=82.3
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..+.++|+|+|-+|..+. + + ..+.++++.+|+. | -.+++=+++..
T Consensus 79 ~~~~~aGadgv~vh~e~~--------~-----~-----------~~~~~~~~~i~~~-g-~~~gv~~~p~t--------- 123 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHN--------A-----S-----------PHLHRTLCQIREL-G-KKAGAVLNPST--------- 123 (230)
T ss_dssp HHHHHHTCSEEEEECSTT--------T-----C-----------TTHHHHHHHHHHT-T-CEEEEEECTTC---------
T ss_pred HHHHHcCCCEEEECcccc--------c-----c-----------hhHHHHHHHHHHc-C-CcEEEEEeCCC---------
Confidence 556778999999996631 0 0 1245677777663 2 15777776621
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeC--CCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 015862 270 PEALGLYMAESLNKYGILYCHMVE--PRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADL 342 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~--~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 342 (399)
+.+ ..+.+.+ ++||+-+.. +.++.....+...+.++++|+.+ +.|+.+.||++.+.+.++++.| +|.
T Consensus 124 ~~e----~~~~~~~-~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aG-ad~ 197 (230)
T 1tqj_A 124 PLD----FLEYVLP-VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAG-ANA 197 (230)
T ss_dssp CGG----GGTTTGG-GCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHT-CCE
T ss_pred cHH----HHHHHHh-cCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcC-CCE
Confidence 111 1222222 688885532 22221111122345667788777 7999999999889999999998 999
Q ss_pred EEechHHhhCCcHHHHH
Q 015862 343 VVYGRLFLANPDLPRRF 359 (399)
Q Consensus 343 V~~gR~~iadPdl~~k~ 359 (399)
|.+|++++..+|..+.+
T Consensus 198 vvvGSai~~a~d~~~~~ 214 (230)
T 1tqj_A 198 IVAGSAVFNAPNYAEAI 214 (230)
T ss_dssp EEESHHHHTSSCHHHHH
T ss_pred EEECHHHHCCCCHHHHH
Confidence 99999999987754443
No 217
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.77 E-value=0.00043 Score=66.08 Aligned_cols=204 Identities=12% Similarity=0.099 Sum_probs=125.5
Q ss_pred HHHHhhcCCCcEEEEcccccCCCCCCCCCCCCCCCHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcc
Q 015862 68 LYYSQRTTKGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPIS 147 (399)
Q Consensus 68 ~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~a 147 (399)
....+.+ |.-.|.+++..+.-...++|....+--++.+...+++++.+. .++++.+-. | ++
T Consensus 30 A~~~~~a-G~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~---~PviaD~d~-G-yg------------- 90 (295)
T 1xg4_A 30 ALLAQRA-GYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS---LPLLVDADI-G-FG------------- 90 (295)
T ss_dssp HHHHHHT-TCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC---SCEEEECTT-C-SS-------------
T ss_pred HHHHHHc-CCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC---CCEEecCCc-c-cC-------------
Confidence 3344444 676777776655533345555433344677777788877642 456666621 0 00
Q ss_pred cCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC
Q 015862 148 CTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG 227 (399)
Q Consensus 148 ps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG 227 (399)
..| ++..+.+++..++|++||.|-.+.+ .+|....||
T Consensus 91 --------------------~~~------------~~~~~~v~~l~~aGa~gv~iEd~~~-----------~k~cgH~~g 127 (295)
T 1xg4_A 91 --------------------SSA------------FNVARTVKSMIKAGAAGLHIEDQVG-----------AKRSGHRPN 127 (295)
T ss_dssp --------------------SSH------------HHHHHHHHHHHHHTCSEEEEECBCS-----------SCCCTTSSS
T ss_pred --------------------CCH------------HHHHHHHHHHHHcCCeEEEECCCCC-----------CcccCCCCC
Confidence 011 2347778888899999999998862 456666666
Q ss_pred c-hhhhhHHHHHHHHHHHHHh-CCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC
Q 015862 228 S-LENRCRFALEIVEAVSNEI-GAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE 304 (399)
Q Consensus 228 s-lenR~r~~~eii~avR~~v-g~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~ 304 (399)
. +.....++ +-|++++++. +.+ .|.-|..... ....+++++-++.++++|+|.|-+... +
T Consensus 128 k~L~p~~~~~-~~I~Aa~~a~~~~~~~i~aRtda~~-------~~gl~~ai~ra~ay~eAGAd~i~~e~~---------~ 190 (295)
T 1xg4_A 128 KAIVSKEEMV-DRIRAAVDAKTDPDFVIMARTDALA-------VEGLDAAIERAQAYVEAGAEMLFPEAI---------T 190 (295)
T ss_dssp CCBCCHHHHH-HHHHHHHHHCSSTTSEEEEEECCHH-------HHCHHHHHHHHHHHHHTTCSEEEETTC---------C
T ss_pred CccCCHHHHH-HHHHHHHHhccCCCcEEEEecHHhh-------hcCHHHHHHHHHHHHHcCCCEEEEeCC---------C
Confidence 4 44333343 4444444443 433 4566664310 112577899999999999999887432 2
Q ss_pred CchhhHHHHhhcCCcEEEeCC---CCHHHHHHHHHcCCCcEEEechHHh
Q 015862 305 CPHSLLPMRKAFKGTFLVAGG---YDREDGNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi~~Gg---it~~~a~~~L~~G~~D~V~~gR~~i 350 (399)
..+.++.|.+.+++|+++|.- -++....+-|++=++++|+++..++
T Consensus 191 ~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 191 ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp SHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 356788899999999877643 2433333444444499999999876
No 218
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.76 E-value=0.00012 Score=67.01 Aligned_cols=131 Identities=20% Similarity=0.268 Sum_probs=79.6
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
.+..+.++|+|+|.+|...+ .+ + ...++++++++. |. .+++=+++..
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~-------------------~~-~----~~~~~~~~~~~~-g~-~ig~~~~p~t------- 129 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQS-------------------ST-I----HLHRTINQIKSL-GA-KAGVVLNPGT------- 129 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTT-------------------TC-S----CHHHHHHHHHHT-TS-EEEEEECTTC-------
T ss_pred HHHHHHHcCCCEEEEEecCc-------------------cc-h----hHHHHHHHHHHc-CC-cEEEEeCCCC-------
Confidence 44555779999999996520 00 0 135677777764 32 4565555421
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCC--CcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCC
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEP--RMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRA 340 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~--~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~ 340 (399)
+.+ ..+.+ ..++||+-+... .+..........+.++.+|+.+ +.|+++.||++++.+.++++.| +
T Consensus 130 --~~e----~~~~~-~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aG-a 201 (230)
T 1rpx_A 130 --PLT----AIEYV-LDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAG-A 201 (230)
T ss_dssp --CGG----GGTTT-TTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHT-C
T ss_pred --CHH----HHHHH-HhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcC-C
Confidence 111 11112 236888843321 1211111111223456677766 7899999999999999999988 9
Q ss_pred cEEEechHHhhCCcHHHHH
Q 015862 341 DLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 341 D~V~~gR~~iadPdl~~k~ 359 (399)
|+|.+|++++..+|..+.+
T Consensus 202 d~vvvgSaI~~a~dp~~a~ 220 (230)
T 1rpx_A 202 NALVAGSAVFGAPDYAEAI 220 (230)
T ss_dssp CEEEESHHHHTSSCHHHHH
T ss_pred CEEEEChhhhCCCCHHHHH
Confidence 9999999999988754443
No 219
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=97.75 E-value=0.00047 Score=69.08 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=86.9
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCCh
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNP 270 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~ 270 (399)
+++.||..++|..+.| |+ ||. ...+--.+.|++||+++|++ .|.+..+. ..+
T Consensus 182 ~~~~G~~~~KiK~g~g---------------~~-~G~--~~~~~d~~~v~avrea~G~~~~L~vDaN~---------~~~ 234 (415)
T 2p3z_A 182 AKEMGFIGGKMPTHWG---------------PH-DGD--AGIRKDAAMVADMREKCGPDFWLMLDCWM---------SQD 234 (415)
T ss_dssp HHHHTCSEEEEECCCC---------------GG-GHH--HHHHHHHHHHHHHHHHHCSSSEEEEECTT---------CCC
T ss_pred HHHhCcceEEEecccC---------------cc-ccc--ccHHHHHHHHHHHHHHhCCCCEEEEECCC---------CCC
Confidence 4568999999876422 11 121 12344578999999999976 46665553 235
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.++++++++.|+++++.||+ +|. ....++..+.+++.++ +||++...+ ++.++.++|+.+ +|+|-+
T Consensus 235 ~~~Ai~~~~~l~~~~i~~iE--qPl------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 235 VNYATKLAHACAPFNLKWIE--ECL------PPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp HHHHHHHHHHHGGGTCCEEE--CCS------CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred HHHHHHHHHHHhhcCCceEe--CCC------CcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 78899999999999999988 552 1224566778999888 788777777 899999999999 998876
No 220
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.75 E-value=0.00014 Score=65.99 Aligned_cols=127 Identities=20% Similarity=0.272 Sum_probs=78.7
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..+.++|+|+|.+|+..+ ....++++++++. |. .+++=+++..
T Consensus 78 ~~~~~~gad~v~vh~~~~--------------------------~~~~~~~~~~~~~-g~-~i~~~~~~~t--------- 120 (220)
T 2fli_A 78 EAFAQAGADIMTIHTEST--------------------------RHIHGALQKIKAA-GM-KAGVVINPGT--------- 120 (220)
T ss_dssp HHHHHHTCSEEEEEGGGC--------------------------SCHHHHHHHHHHT-TS-EEEEEECTTS---------
T ss_pred HHHHHcCCCEEEEccCcc--------------------------ccHHHHHHHHHHc-CC-cEEEEEcCCC---------
Confidence 667789999999997541 1235667777664 42 4555554421
Q ss_pred hHHHHHHHHHhhhhhCceEEEEe--CCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 015862 270 PEALGLYMAESLNKYGILYCHMV--EPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADL 342 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 342 (399)
+.+ ..+.+. .++|++-+. .+.+..........+.++.+|+.+ +.|+++.||++++++.++++.| +|.
T Consensus 121 ~~e----~~~~~~-~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~G-ad~ 194 (220)
T 2fli_A 121 PAT----ALEPLL-DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAG-ANV 194 (220)
T ss_dssp CGG----GGGGGT-TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHT-CCE
T ss_pred CHH----HHHHHH-hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcC-CCE
Confidence 111 122222 347887442 122221111111123456677665 6889999999999999988888 999
Q ss_pred EEechHHhhCCcHHHHH
Q 015862 343 VVYGRLFLANPDLPRRF 359 (399)
Q Consensus 343 V~~gR~~iadPdl~~k~ 359 (399)
|.+||+++..+|..+.+
T Consensus 195 vvvGsai~~~~d~~~a~ 211 (220)
T 2fli_A 195 FVAGSYLFKASDLVSQV 211 (220)
T ss_dssp EEESHHHHTSSCHHHHH
T ss_pred EEEChHHhCCCCHHHHH
Confidence 99999999988764443
No 221
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.75 E-value=0.00096 Score=62.99 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=82.8
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..|.++|+|+|-|..+. |+ ..-+.++++..++ .|-+ +.+-++
T Consensus 129 ~~A~~~GAD~VlLi~a~-------l~-----------------~~~l~~l~~~a~~-lGl~-~lvev~------------ 170 (272)
T 3qja_A 129 HEARAHGADMLLLIVAA-------LE-----------------QSVLVSMLDRTES-LGMT-ALVEVH------------ 170 (272)
T ss_dssp HHHHHTTCSEEEEEGGG-------SC-----------------HHHHHHHHHHHHH-TTCE-EEEEES------------
T ss_pred HHHHHcCCCEEEEeccc-------CC-----------------HHHHHHHHHHHHH-CCCc-EEEEcC------------
Confidence 44557999999986443 11 1234666666665 4532 333332
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEec
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 346 (399)
+.++.. ...+.|+|+|-+....... .....+....+++.+ ++||++.||| |++++.++++.| +|.|.+|
T Consensus 171 t~ee~~----~A~~~Gad~IGv~~r~l~~---~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G-adgvlVG 242 (272)
T 3qja_A 171 TEQEAD----RALKAGAKVIGVNARDLMT---LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG-ADAVLVG 242 (272)
T ss_dssp SHHHHH----HHHHHTCSEEEEESBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT-CSEEEEC
T ss_pred CHHHHH----HHHHCCCCEEEECCCcccc---cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC-CCEEEEc
Confidence 123322 2235699999887432211 122456677788877 6899999999 799999999998 9999999
Q ss_pred hHHhhCCcHHHHHH
Q 015862 347 RLFLANPDLPRRFE 360 (399)
Q Consensus 347 R~~iadPdl~~k~~ 360 (399)
++++..+|.-..++
T Consensus 243 sal~~a~dp~~~~~ 256 (272)
T 3qja_A 243 EGLVTSGDPRAAVA 256 (272)
T ss_dssp HHHHTCSCHHHHHH
T ss_pred HHHhCCCCHHHHHH
Confidence 99998887655444
No 222
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.71 E-value=0.00025 Score=66.77 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEc------cccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHH-hCCCceEEE
Q 015862 183 NDFRLAARNAIEAGFDGVELH------GAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNE-IGADRVGIR 255 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh------~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~-vg~~~v~vr 255 (399)
+.+.+.++...++|+|.|||. .+-|-.+++. +.|-=+.|= +.+-++++++++|+. +. -||.+-
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a-----~~~AL~~G~----~~~~~~~~v~~ir~~~~~-~Pivlm 101 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGA-----NLRSLAAGT----TSSDCFDIITKVRAQHPD-MPIGLL 101 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHH-----HHHHHHTTC----CHHHHHHHHHHHHHHCTT-CCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH-----HHHHHHcCC----CHHHHHHHHHHHHhcCCC-CCEEEE
Confidence 346777888889999999998 3334333321 111111121 134568999999987 42 254332
Q ss_pred --ecCC-----cccC------CC----CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-------------cc-----
Q 015862 256 --LSPF-----ANYM------ES----GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-------------RE----- 300 (399)
Q Consensus 256 --ls~~-----~~~~------~~----~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-------------~~----- 300 (399)
.|+. +.|. +. -.+.+.++..++.+.+.+.|++.+-+..+..+. .+
T Consensus 102 ~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~ 181 (267)
T 3vnd_A 102 LYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRA 181 (267)
T ss_dssp ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCC
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecC
Confidence 2320 0000 00 112334445556666666776665444432110 00
Q ss_pred --cc------CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 301 --EK------SECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 301 --~~------~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
.. ....+.++.+|+.++.||++.+|+ |++++.+.++.| +|.|.+|.+++.
T Consensus 182 GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~g-ADgvVVGSaiv~ 240 (267)
T 3vnd_A 182 GVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAG-AAGAISGSAVVK 240 (267)
T ss_dssp CCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred CCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 00 011246778898889999999999 799999999998 999999998874
No 223
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.68 E-value=0.0013 Score=62.01 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=46.4
Q ss_pred chhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 306 PHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 306 ~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
.+....+.+.+ ++|+|+-||| |++++..+.+.| +|.|.+|.+++..+|....+++
T Consensus 207 l~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~G-a~gvLVG~almr~~d~~~~~~~ 264 (272)
T 3tsm_A 207 LAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSG-IGTFLIGESLMRQHDVAAATRA 264 (272)
T ss_dssp THHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTT-CCEEEECHHHHTSSCHHHHHHH
T ss_pred hHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHcCCcCHHHHHHH
Confidence 44556677777 4789999999 999999999998 9999999999999998776653
No 224
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.68 E-value=0.0011 Score=63.37 Aligned_cols=130 Identities=11% Similarity=-0.009 Sum_probs=79.9
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCC-C-ceEEEecCCcccCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGA-D-RVGIRLSPFANYMESG 266 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~-~-~v~vrls~~~~~~~~~ 266 (399)
++.|.+.|+|+|.++.-- +.+ ..+-.++-+.++++++.. . ++.+- .+ .+..
T Consensus 131 ve~Av~~GAdaV~~~i~~--------------Gs~--------~~~~~l~~i~~v~~~a~~~GlpvIie-~~----~G~~ 183 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYI--------------GSE--------YEHQSIKNIIQLVDAGMKVGMPTMAV-TG----VGKD 183 (295)
T ss_dssp HHHHHHTTCSEEEEEECT--------------TST--------THHHHHHHHHHHHHHHHTTTCCEEEE-EC----C---
T ss_pred HHHHHHCCCCEEEEEEEC--------------CCC--------cHHHHHHHHHHHHHHHHHcCCEEEEE-CC----CCCc
Confidence 456778999999987432 211 112234444555555522 2 44442 11 1100
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-C-H----HHHHHHHHcCCC
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-D-R----EDGNKAIAEGRA 340 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t-~----~~a~~~L~~G~~ 340 (399)
...+.+.....|+...+.|+|||-+..+ .+..+++.+..++||++.||. + . +.+.++++.| +
T Consensus 184 ~~~d~e~i~~aariA~elGAD~VKt~~t-----------~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aG-A 251 (295)
T 3glc_A 184 MVRDQRYFSLATRIAAEMGAQIIKTYYV-----------EKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQG-A 251 (295)
T ss_dssp -CCSHHHHHHHHHHHHHTTCSEEEEECC-----------TTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTT-C
T ss_pred cCCCHHHHHHHHHHHHHhCCCEEEeCCC-----------HHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhC-C
Confidence 0122333445777778899999987521 024567777788999999998 3 3 3466778887 9
Q ss_pred cEEEechHHhhCCcHHH
Q 015862 341 DLVVYGRLFLANPDLPR 357 (399)
Q Consensus 341 D~V~~gR~~iadPdl~~ 357 (399)
+.|.+||.++..|+-..
T Consensus 252 ~Gv~vGRnI~q~~dp~~ 268 (295)
T 3glc_A 252 SGVDMGRNIFQSDHPVA 268 (295)
T ss_dssp SEEEESHHHHTSSSHHH
T ss_pred eEEEeHHHHhcCcCHHH
Confidence 99999999998776543
No 225
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.66 E-value=0.00012 Score=66.87 Aligned_cols=124 Identities=16% Similarity=0.049 Sum_probs=78.9
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE-EecCCcccCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI-RLSPFANYMESGDS 268 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v-rls~~~~~~~~~~~ 268 (399)
+.+.++|+|+|-+|+..+ ...+.++++++|+. |- .+++ =+++ .
T Consensus 77 ~~~~~aGad~i~vh~~~~-------------------------~~~~~~~~~~~~~~-g~-~~~~d~l~~---------~ 120 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAH-------------------------IATIAACKKVADEL-NG-EIQIEIYGN---------W 120 (218)
T ss_dssp HHHHHHTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-TC-EEEEECCSS---------C
T ss_pred HHHHhcCCCEEEEecCCC-------------------------HHHHHHHHHHHHHh-CC-ccceeeeec---------C
Confidence 666889999999996541 12346677777764 32 2343 2333 1
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
+.++.. .+.+.|+||+-+..+............+.++.||+.. +.|+++.||++++.+.++++.| +|.|.+|
T Consensus 121 -T~~~~~----~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-Ad~vvvG 194 (218)
T 3jr2_A 121 -TMQDAK----AWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVPEDIYLFEGIK-TKTFIAG 194 (218)
T ss_dssp -CHHHHH----HHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-EEEEEES
T ss_pred -CHHHHH----HHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHcC-CCEEEEc
Confidence 223322 3345599998654321111001112234566677764 7899999999999999999998 9999999
Q ss_pred hHHhhCCcH
Q 015862 347 RLFLANPDL 355 (399)
Q Consensus 347 R~~iadPdl 355 (399)
|+++..+|.
T Consensus 195 saI~~a~dp 203 (218)
T 3jr2_A 195 RALAGAEGQ 203 (218)
T ss_dssp GGGSHHHHH
T ss_pred hhhcCCCCH
Confidence 999865544
No 226
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.66 E-value=0.00046 Score=64.21 Aligned_cols=141 Identities=12% Similarity=0.116 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.++.+++.++|.|-+.+-..-| .|. | |. .|| .++++++|+..++-++-+.+-..+
T Consensus 42 L~~~i~~l~~~G~d~lHvDVmDg----~FV-p--ni---t~G----------~~~v~~lr~~~p~~~ldvHLmv~~---- 97 (246)
T 3inp_A 42 LGDDVKAVLAAGADNIHFDVMDN----HYV-P--NL---TFG----------PMVLKALRDYGITAGMDVHLMVKP---- 97 (246)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBS----SSS-S--CB---CCC----------HHHHHHHHHHTCCSCEEEEEECSS----
T ss_pred HHHHHHHHHHcCCCEEEEEecCC----CcC-c--ch---hcC----------HHHHHHHHHhCCCCeEEEEEeeCC----
Confidence 46777888889999666554332 132 2 21 234 789999999874446666665421
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-----------------------cc-------c----------cC-
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-----------------------RE-------E----------KS- 303 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-----------------------~~-------~----------~~- 303 (399)
+ + .+++.+.++|+|+++++.-.... +. . .+
T Consensus 98 -----p-~---~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PG 168 (246)
T 3inp_A 98 -----V-D---ALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPG 168 (246)
T ss_dssp -----C-H---HHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTT
T ss_pred -----H-H---HHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCC
Confidence 1 1 13444556677777664210000 00 0 00
Q ss_pred -----CC---chhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 304 -----EC---PHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 304 -----~~---~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
.. ++-++++|+.. +.++.+.||++++.+..+++.| +|.+.+|++++..+|..+.+
T Consensus 169 fgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aG-AD~~V~GSaIf~a~dp~~~i 236 (246)
T 3inp_A 169 FGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCG-VNAFVAGSAIFNSDSYKQTI 236 (246)
T ss_dssp C--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTT-CCEEEESHHHHTSSCHHHHH
T ss_pred CCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcC-CCEEEEehHHhCCCCHHHHH
Confidence 00 12234455443 4778899999999999999999 99999999999877765443
No 227
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.64 E-value=0.0009 Score=61.39 Aligned_cols=134 Identities=10% Similarity=0.076 Sum_probs=91.6
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++. .+.|+|.|++..--|+|.+ ++...+.+-|.+|+++++.. .+|+=....
T Consensus 70 ~~E~~~-i~~GAdEID~Vinig~~~~-------------------g~~~~v~~ei~~v~~a~~~~--~lKvIlEt~---- 123 (226)
T 1vcv_A 70 IALVSR-LAEVADEIDVVAPIGLVKS-------------------RRWAEVRRDLISVVGAAGGR--VVKVITEEP---- 123 (226)
T ss_dssp HHHHHH-HTTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTS--EEEEECCGG----
T ss_pred HHHHHH-HHCCCCEEEEecchhhhcC-------------------CCHHHHHHHHHHHHHHHcCC--CceEEEecc----
Confidence 345566 8899999999987776554 23467888999999999743 444211111
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc------ccccCCCchhhHHHHhh---cC--CcEEEeCCC-CHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT------REEKSECPHSLLPMRKA---FK--GTFLVAGGY-DREDGNK 333 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~------~~~~~~~~~~~~~ir~~---~~--~pvi~~Ggi-t~~~a~~ 333 (399)
..+.++-...|+...++|+|||-.+.+.... ........+..+.+++. ++ ++|-++||+ |.+++.+
T Consensus 124 --~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~ 201 (226)
T 1vcv_A 124 --YLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKA 201 (226)
T ss_dssp --GCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHH
Confidence 1234667778888889999999976553200 00122344556666666 65 889999999 8999999
Q ss_pred HHHc---CCCc----EEEechH
Q 015862 334 AIAE---GRAD----LVVYGRL 348 (399)
Q Consensus 334 ~L~~---G~~D----~V~~gR~ 348 (399)
+++. | ++ -++..++
T Consensus 202 ~i~a~~~G-a~~~~fRiGtS~~ 222 (226)
T 1vcv_A 202 IVDAIGWG-EDPARVRLGTSTP 222 (226)
T ss_dssp HHHHHCSC-SCTTTEEEEESCG
T ss_pred HHHHHHCC-CCcCCceEecCch
Confidence 9999 8 88 6666543
No 228
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=97.63 E-value=0.00022 Score=69.57 Aligned_cols=107 Identities=11% Similarity=-0.025 Sum_probs=78.8
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDS 268 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~ 268 (399)
+.+++.||..++|+.+ .+ -.+.|++||+++ ++ .|.|..|. .
T Consensus 135 ~~~~~~G~~~~KiKvg---------------------------~~-d~~~v~avr~~~-~~~~l~vDaN~---------~ 176 (342)
T 2okt_A 135 ESLKATKPTRIKLKWT---------------------------PQ-IMHQIRVLRELD-FHFQLVIDANE---------S 176 (342)
T ss_dssp HHHHHHCCSEEEEECC---------------------------TT-HHHHHHHHTTSS-SCCEEEEECTT---------C
T ss_pred HHHHHcCCcEEEEEeC---------------------------HH-HHHHHHHHHHhC-CCCeEEEECCC---------C
Confidence 4555789999999864 12 378999999999 55 45555553 2
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.+.+++ ++++.|++.++.|++ +|... ......+. +.+++||++...+ +.+++.++++.+.+|+|.+
T Consensus 177 ~~~~~A-~~~~~l~~~~i~~iE--qP~~~------~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~ 243 (342)
T 2okt_A 177 LDRQDF-TQLQLLAREQVLYIE--EPFKD------ISMLDEVA--DGTIPPIALDEKATSLLDIINLIELYNVKVVVL 243 (342)
T ss_dssp CCGGGH-HHHHHHGGGCEEEEE--CCCSS------GGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEE
T ss_pred CCHHHH-HHHHHHhhCCCcEEE--CCCCC------ccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEE
Confidence 245668 999999999999988 55311 12222333 5578999998888 8999999999999999876
No 229
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.61 E-value=0.00052 Score=77.50 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc---cc-----cccCCCc
Q 015862 235 FALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK---TR-----EEKSECP 306 (399)
Q Consensus 235 ~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~---~~-----~~~~~~~ 306 (399)
-+.++|+.+|+..+.-+|+||+.+.. .. ...++.++++|+|+|.++...-. .+ ....+..
T Consensus 979 dl~~~I~~Lk~~~~~~PV~VKlv~~~---------gi---~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~ 1046 (1479)
T 1ea0_A 979 DLAQLIYDLKQINPDAKVTVKLVSRS---------GI---GTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWE 1046 (1479)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECCT---------TH---HHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCC---------Ch---HHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHH
Confidence 46789999999986558999998621 11 22467788899999998643211 00 0111222
Q ss_pred hhhHHHHhhc-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 307 HSLLPMRKAF-------KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 307 ~~~~~ir~~~-------~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
..+..+.+++ ++||++.||+ |..++.++|.-| ||.|++||+++.
T Consensus 1047 ~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1047 MGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLG-AEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTT-CSEEECCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeeEcHHHHH
Confidence 3455566654 6899999999 999999999999 999999999976
No 230
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.60 E-value=8.1e-05 Score=69.24 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=69.9
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.++++.+.+.|+|.+|+..-... ......+.+.++.+.+.+.+|+.++||+ |.++++++|+.| +|-|.++..++.||
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~G-adkVii~t~a~~~p 111 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCG-VKRVVIGSMAIKDA 111 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTT-CSEEEECTTTTTCH
T ss_pred HHHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcC-CCEEEEccccccCC
Confidence 34678899999999998632111 1123446678888999999999999999 899999999999 99999999999999
Q ss_pred cHHHHHHh
Q 015862 354 DLPRRFEL 361 (399)
Q Consensus 354 dl~~k~~~ 361 (399)
+|+.++.+
T Consensus 112 ~li~e~~~ 119 (243)
T 4gj1_A 112 TLCLEILK 119 (243)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHh
Confidence 99988765
No 231
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.56 E-value=0.00032 Score=64.43 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=64.2
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechH
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~ 348 (399)
.++....+..-+-.|..++-+.. + +. ..+.+.++++++.+ ++||+++||| |++++++++ .| +|.|.+|.+
T Consensus 139 ~e~~~~~a~~a~~~g~~~VYld~-s-G~----~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~g-AD~VVVGSa 210 (228)
T 3vzx_A 139 MDDIVAYARVSELLQLPIFYLEY-S-GV----LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EH-ADVIVVGNA 210 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-T-TS----CCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TT-CSEEEECTH
T ss_pred HHHHHHHHHHHHHcCCCEEEecC-C-CC----cCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hC-CCEEEEChH
Confidence 35555566555556666665543 1 11 12567899999999 7999999999 899999998 66 999999999
Q ss_pred HhhCCcHHHHHHh
Q 015862 349 FLANPDLPRRFEL 361 (399)
Q Consensus 349 ~iadPdl~~k~~~ 361 (399)
++.||++..++.+
T Consensus 211 ~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 211 VYEDFDRALKTVA 223 (228)
T ss_dssp HHHCHHHHHHHHH
T ss_pred HhcCHHHHHHHHH
Confidence 9999999988764
No 232
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.56 E-value=0.0004 Score=63.72 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=78.9
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~ 264 (399)
.+.+..|.++|+|+| |.++ + | .++++..|+ .|.. .+++ .
T Consensus 79 ~d~~~~A~~aGAd~v--~~p~-----------~----d-------------~~v~~~ar~-~g~~~i~Gv--~------- 118 (224)
T 1vhc_A 79 AEQVVLAKSSGADFV--VTPG-----------L----N-------------PKIVKLCQD-LNFPITPGV--N------- 118 (224)
T ss_dssp HHHHHHHHHHTCSEE--ECSS-----------C----C-------------HHHHHHHHH-TTCCEECEE--C-------
T ss_pred HHHHHHHHHCCCCEE--EECC-----------C----C-------------HHHHHHHHH-hCCCEEecc--C-------
Confidence 467889999999999 4332 1 1 678888888 7765 3442 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-CchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-CPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADL 342 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~ 342 (399)
+.++ + ....+.|+||+-+.. .... ...+++.++..+ ++|+++.||++++.+.++++.|.++.
T Consensus 119 -----t~~e---~-~~A~~~Gad~vk~Fp-------a~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~ 182 (224)
T 1vhc_A 119 -----NPMA---I-EIALEMGISAVKFFP-------AEASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVA 182 (224)
T ss_dssp -----SHHH---H-HHHHHTTCCEEEETT-------TTTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCC
T ss_pred -----CHHH---H-HHHHHCCCCEEEEee-------CccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEE
Confidence 1222 2 234578999999821 1111 256788899988 69999999999999999999966999
Q ss_pred EEechHHhhC
Q 015862 343 VVYGRLFLAN 352 (399)
Q Consensus 343 V~~gR~~iad 352 (399)
|+ ++.++..
T Consensus 183 v~-gS~i~~~ 191 (224)
T 1vhc_A 183 CG-GSWFVEK 191 (224)
T ss_dssp EE-ECGGGCH
T ss_pred EE-EchhcCc
Confidence 99 8887753
No 233
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.55 E-value=0.00071 Score=76.56 Aligned_cols=104 Identities=12% Similarity=0.051 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc---cc-----cccCCCc
Q 015862 235 FALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK---TR-----EEKSECP 306 (399)
Q Consensus 235 ~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~---~~-----~~~~~~~ 306 (399)
-+.++|+.+|+..+.-+|+||+.+.. .. ...+..++++|+|+|.++...-. .+ ....+..
T Consensus 1014 dl~~~I~~Lk~~~~~~PV~VKlv~~~---------gi---~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~ 1081 (1520)
T 1ofd_A 1014 DLAQLIYDLHQINPEAQVSVKLVAEI---------GI---GTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWE 1081 (1520)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECST---------TH---HHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCCC---------Ch---HHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHH
Confidence 45789999999885558999998621 11 22566788899999998643211 00 0112223
Q ss_pred hhhHHHHhhc-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 307 HSLLPMRKAF-------KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 307 ~~~~~ir~~~-------~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
..+..+.+++ ++||++.||| |..++.++|.-| ||.|++||+++.
T Consensus 1082 ~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1133 (1520)
T 1ofd_A 1082 LGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMG-AEEYGFGSIAMI 1133 (1520)
T ss_dssp HHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTT-CSEEECSHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeEEcHHHHH
Confidence 3445555544 6899999999 999999999999 999999999976
No 234
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=97.54 E-value=0.00027 Score=68.81 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
++++.|+.+++ ||..++|+.+.. . -.+.+++||++++. .|.+..|.
T Consensus 137 ~~~~~a~~~~~-g~~~~K~Kvg~~--------------~-------------d~~~v~avR~~~~~-~l~vDaN~----- 182 (338)
T 3ijl_A 137 VVRAKTKECAG-LFNILKVKLGRD--------------N-------------DKEMIETIRSVTDL-PIAVDANQ----- 182 (338)
T ss_dssp HHHHHHHHHHT-TCSSEEEECSSS--------------C-------------HHHHHHHHHTTCCC-CEEEECTT-----
T ss_pred HHHHHHHHHHh-cccEEEEecCcH--------------H-------------HHHHHHHHHhhcCC-cEEEECcC-----
Confidence 34555555555 899999997641 1 27789999999852 45554443
Q ss_pred CCCCCC-hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 264 ESGDSN-PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 264 ~~~~~~-~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
.. +.++++++++.|++.++.|++ +|. .....+..+.+++.+++||++...+ +..++.+++ +.+|
T Consensus 183 ----~~t~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d 248 (338)
T 3ijl_A 183 ----GWKDRQYALDMIHWLKEKGIVMIE--QPM------PKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFT 248 (338)
T ss_dssp ----CCCCHHHHHHHHHHHHHTTEEEEE--CCS------CTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBS
T ss_pred ----CCCCHHHHHHHHHHHhhCCCCEEE--CCC------CCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCC
Confidence 33 367899999999999999988 552 1224567788999999999998888 888887775 5699
Q ss_pred EEEe
Q 015862 342 LVVY 345 (399)
Q Consensus 342 ~V~~ 345 (399)
+|.+
T Consensus 249 ~i~~ 252 (338)
T 3ijl_A 249 GINI 252 (338)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 235
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.54 E-value=0.0011 Score=61.83 Aligned_cols=129 Identities=18% Similarity=0.131 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHH-hCCCEE--EEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE-EecC
Q 015862 183 NDFRLAARNAIE-AGFDGV--ELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI-RLSP 258 (399)
Q Consensus 183 ~~f~~aA~~a~~-aGfDgV--eIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v-rls~ 258 (399)
++.+.+|+.+++ .|-+-| ||+.-+.| |+| -+.+.+++.++-+.+.+..+ -.+.
T Consensus 77 eeAv~~a~lare~~gt~~iKlEvi~d~~~-----l~p------------------D~~~tv~aa~~L~k~Gf~Vlpy~~~ 133 (268)
T 2htm_A 77 EEAVRLARLGRLLTGERWVKLEVIPDPTY-----LLP------------------DPLETLKAAERLIEEDFLVLPYMGP 133 (268)
T ss_dssp HHHHHHHHHHHHHHCCSEEBCCCCSCTTT-----TCC------------------CHHHHHHHHHHHHHTTCEECCEECS
T ss_pred HHHHHHHHhhhHhcCcceeeeeeccCccc-----cCc------------------CHHHHHHHHHHHHHCCCEEeeccCC
Confidence 445677777776 477775 44543322 222 14678888888775443222 1121
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHh-hcC-CcEEEeCCC-CHHHHHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRK-AFK-GTFLVAGGY-DREDGNKAI 335 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~-~~~-~pvi~~Ggi-t~~~a~~~L 335 (399)
+ ..+++.|++.|++.|.-...-.+. .......+.++.+++ ..+ +|||+.||| |++++..++
T Consensus 134 -----------D----~~~ak~l~~~G~~aVmPlg~pIGs-G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Am 197 (268)
T 2htm_A 134 -----------D----LVLAKRLAALGTATVMPLAAPIGS-GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVM 197 (268)
T ss_dssp -----------C----HHHHHHHHHHTCSCBEEBSSSTTT-CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHH
T ss_pred -----------C----HHHHHHHHhcCCCEEEecCccCcC-CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHH
Confidence 1 257889999999887421111111 112224567888888 678 999999999 999999999
Q ss_pred HcCCCcEEEechHHhh
Q 015862 336 AEGRADLVVYGRLFLA 351 (399)
Q Consensus 336 ~~G~~D~V~~gR~~ia 351 (399)
+-| ||.|.+|.++..
T Consensus 198 eLG-AdgVlVgSAI~~ 212 (268)
T 2htm_A 198 ELG-LDAVLVNTAIAE 212 (268)
T ss_dssp HTT-CCEEEESHHHHT
T ss_pred HcC-CCEEEEChHHhC
Confidence 999 999999999986
No 236
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.53 E-value=0.0013 Score=61.40 Aligned_cols=162 Identities=16% Similarity=0.137 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccc--hhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE--EecC
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHG--YLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI--RLSP 258 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~G--yLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v--rls~ 258 (399)
+.+.+.++.+.++|+|.|||...+. ..-..|. +..+.|.-+.|- +.+...+++++||+.+. -||.+ +.++
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i-~~a~~~al~~g~----~~~~~~~~i~~ir~~~~-~Pv~~m~~~~~ 105 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPII-QASVARALASGT----TMDAVLEMLREVTPELS-CPVVLLSYYKP 105 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHH-HHHHHHHHTTTC----CHHHHHHHHHHHGGGCS-SCEEEECCSHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHH-HHHHHHHHHcCC----CHHHHHHHHHHHHhcCC-CCEEEEecCcH
Confidence 4678888899999999999964321 0000010 001111112221 35677899999999853 25544 2332
Q ss_pred Cc--c---c-----CCC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCc------------------------cccccc-
Q 015862 259 FA--N---Y-----MES-GDSNPEALGLYMAESLNKYGILYCHMVEPRM------------------------KTREEK- 302 (399)
Q Consensus 259 ~~--~---~-----~~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~------------------------~~~~~~- 302 (399)
.. . . .+. -.+.+.++..++.+.+.+.|++.+.+..+.. ......
T Consensus 106 ~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~ 185 (262)
T 1rd5_A 106 IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANV 185 (262)
T ss_dssp HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCB
T ss_pred HHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCC
Confidence 10 0 0 000 0112223344555555555655433222210 000000
Q ss_pred -CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 303 -SECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 303 -~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
....+.++.+|+.+++||++.||+ |++++.++++.| +|.|.+|.+++.
T Consensus 186 ~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~G-AdgvvVGSai~~ 235 (262)
T 1rd5_A 186 NPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG-ADGVIIGSAMVR 235 (262)
T ss_dssp CTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred CchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 001236778888889999999999 599999999988 999999998774
No 237
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.51 E-value=0.00052 Score=63.32 Aligned_cols=49 Identities=20% Similarity=0.369 Sum_probs=43.9
Q ss_pred CchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcH
Q 015862 305 CPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 305 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl 355 (399)
..+.++++++.+ ++||+++||| |+++++++++ | +|.|.+|.+++.+|+-
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-g-Ad~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-Y-ADTIIVGNVIYEKGID 227 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-H-SSEEEECHHHHHHCHH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-C-CCEEEEChHHHhCHHH
Confidence 356788899999 9999999999 8999999988 7 9999999999998853
No 238
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.49 E-value=0.0016 Score=58.68 Aligned_cols=133 Identities=23% Similarity=0.237 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe
Q 015862 177 EIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL 256 (399)
Q Consensus 177 eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl 256 (399)
||-...+.|+ +.+.++|+|.|-+|+-.| .+.++.+|+..| -.+...+
T Consensus 62 DI~~t~~~~v---~~~~~~Gad~vtvh~~~g-----------------------------~~~i~~~~~~~g-v~vl~~t 108 (208)
T 2czd_A 62 DIPNTNRLIA---RKVFGAGADYVIVHTFVG-----------------------------RDSVMAVKELGE-IIMVVEM 108 (208)
T ss_dssp SCHHHHHHHH---HHHHHTTCSEEEEESTTC-----------------------------HHHHHHHHTTSE-EEEECCC
T ss_pred chHHHHHHHH---HHHHhcCCCEEEEeccCC-----------------------------HHHHHHHHHhCC-cEEEEec
Confidence 3444444444 444579999999996542 233667776541 0222222
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHH--HHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDRE--DGNK 333 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~--~a~~ 333 (399)
+. +..... . .+....++.+..+.|++.+.+... ..+.++.+|+..+ .++++.||++++ ++.+
T Consensus 109 ~~-~~~~~~-~---~~~v~~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~ 173 (208)
T 2czd_A 109 SH-PGALEF-I---NPLTDRFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKD 173 (208)
T ss_dssp CS-GGGGTT-T---GGGHHHHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHH
T ss_pred CC-cchhhH-H---HHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHH
Confidence 21 111110 0 223445666667889887764321 2345677888876 367899999766 7889
Q ss_pred HHHcCCCcEEEechHHhhCCcHHHH
Q 015862 334 AIAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
+++.| +|+|.+||+++..+|..+.
T Consensus 174 ~~~aG-ad~vvvGr~I~~a~dp~~~ 197 (208)
T 2czd_A 174 AVKAG-ADYIIVGRAIYNAPNPREA 197 (208)
T ss_dssp HHHHT-CSEEEECHHHHTSSSHHHH
T ss_pred HHHcC-CCEEEEChHHhcCCCHHHH
Confidence 99998 9999999999987764333
No 239
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.47 E-value=0.0016 Score=61.91 Aligned_cols=109 Identities=18% Similarity=0.109 Sum_probs=76.7
Q ss_pred ccCCCCCCCCc--hhhhhHHH---HHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEE
Q 015862 218 VNDRTDQYGGS--LENRCRFA---LEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHM 291 (399)
Q Consensus 218 ~N~R~D~yGGs--lenR~r~~---~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v 291 (399)
.|||.+-|..- .+|+..++ .+-++++|+..|++ .|++-+. +.+++. ...+.|+|||-+
T Consensus 159 ~nHR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~------------t~eea~----eA~~aGaD~I~l 222 (286)
T 1x1o_A 159 RNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVR------------SLEELE----EALEAGADLILL 222 (286)
T ss_dssp BCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEES------------SHHHHH----HHHHHTCSEEEE
T ss_pred cccccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeC------------CHHHHH----HHHHcCCCEEEE
Confidence 67888777763 56777664 67889999999876 6777321 234332 233579999887
Q ss_pred eCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 292 VEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
... .....+.+.+.+ ++|+.++||+|++.+.++.+.| +|+|++|....+-|
T Consensus 223 d~~----------~~~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tG-vD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 223 DNF----------PLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAG-VDYVSVGALTHSAK 275 (286)
T ss_dssp ESC----------CHHHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHT-CSEEECTHHHHSCC
T ss_pred CCC----------CHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcC-CCEEEEcHHHcCCC
Confidence 532 122344444444 5899999999999999999999 99999998666544
No 240
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.46 E-value=0.00091 Score=63.19 Aligned_cols=128 Identities=15% Similarity=0.125 Sum_probs=83.6
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|++.|+|.|++..--|+|++.-.. -.+.+.+-|.+|+++++..++.|=|-. .+
T Consensus 109 v~E~~~Av~~GAdEIDmVinig~lksg~~~----------------~~~~v~~eI~~v~~a~~~~~lKVIlEt--~~--- 167 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVINYKKIIENTDE----------------GLKEATKLTQSVKKLLTNKILKVIIEV--GE--- 167 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHHSHHH----------------HHHHHHHHHHHHHTTCTTSEEEEECCH--HH---
T ss_pred HHHHHHHHHcCCCEEEEecchHhhhCCChh----------------HHHHHHHHHHHHHHHhcCCceEEEEec--cc---
Confidence 566788999999999999877766542110 023788889999999974333332211 00
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc------------CCcEEEeCCC-CHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF------------KGTFLVAGGY-DREDGN 332 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~------------~~pvi~~Ggi-t~~~a~ 332 (399)
..+.+.-...++...++|+|||-.+.+.. ......+.++.+++.+ +++|-+.||+ |.++|.
T Consensus 168 --L~d~e~i~~A~~ia~eaGADfVKTSTGf~----~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al 241 (281)
T 2a4a_A 168 --LKTEDLIIKTTLAVLNGNADFIKTSTGKV----QINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTAS 241 (281)
T ss_dssp --HCSHHHHHHHHHHHHTTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHH
T ss_pred --CCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHH
Confidence 11223245677777899999998765421 1223344444444443 4789999999 999999
Q ss_pred HHHHcCCCc
Q 015862 333 KAIAEGRAD 341 (399)
Q Consensus 333 ~~L~~G~~D 341 (399)
++|+.| ++
T Consensus 242 ~~i~ag-a~ 249 (281)
T 2a4a_A 242 HYILLA-RR 249 (281)
T ss_dssp HHHHHH-HH
T ss_pred HHHHHh-hh
Confidence 999987 54
No 241
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.44 E-value=0.001 Score=60.21 Aligned_cols=111 Identities=22% Similarity=0.189 Sum_probs=77.8
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMES 265 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~ 265 (399)
+.+..|.++|+|+| |.++ . | .+++++.|+ .|.+ .+++ +
T Consensus 74 d~~~~A~~~GAd~v--~~~~-----------~----d-------------~~v~~~~~~-~g~~~i~G~--~-------- 112 (207)
T 2yw3_A 74 KEAEAALEAGAAFL--VSPG-----------L----L-------------EEVAALAQA-RGVPYLPGV--L-------- 112 (207)
T ss_dssp HHHHHHHHHTCSEE--EESS-----------C----C-------------HHHHHHHHH-HTCCEEEEE--C--------
T ss_pred HHHHHHHHcCCCEE--EcCC-----------C----C-------------HHHHHHHHH-hCCCEEecC--C--------
Confidence 56678889999998 3222 1 1 477777777 5644 2332 1
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-CchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-CPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 343 (399)
+.++ + ....+.|+||+.+. + .... -...++.++..+ ++|+++.||++++++.++++.| +|.|
T Consensus 113 ----t~~e---~-~~A~~~Gad~v~~f-p------a~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aG-a~~v 176 (207)
T 2yw3_A 113 ----TPTE---V-ERALALGLSALKFF-P------AEPFQGVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALP-NLLA 176 (207)
T ss_dssp ----SHHH---H-HHHHHTTCCEEEET-T------TTTTTHHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCS-SBSC
T ss_pred ----CHHH---H-HHHHHCCCCEEEEe-c------CccccCHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCC-CcEE
Confidence 2233 2 22345799999873 1 1111 235778888888 6999999999999999999999 9999
Q ss_pred EechHHhhCCcH
Q 015862 344 VYGRLFLANPDL 355 (399)
Q Consensus 344 ~~gR~~iadPdl 355 (399)
+++++++. +||
T Consensus 177 avgSai~~-~d~ 187 (207)
T 2yw3_A 177 VGGSWLLQ-GNL 187 (207)
T ss_dssp EEESGGGS-SCH
T ss_pred EEehhhhC-CCH
Confidence 99999987 664
No 242
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.39 E-value=0.0019 Score=60.29 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=84.2
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
...|.++|+|+|-|-... | . ..+.++++..++ .|-+ +.|-++.
T Consensus 121 i~~a~~~GAD~VlL~~~~-------l---------------~---~~l~~l~~~a~~-lGl~-~lvev~~---------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVAL-------L---------------G---ELTGAYLEEARR-LGLE-ALVEVHT---------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHH-------H---------------G---GGHHHHHHHHHH-HTCE-EEEEECS----------
T ss_pred HHHHHHcCCCEEEECccc-------h---------------H---HHHHHHHHHHHH-CCCe-EEEEECC----------
Confidence 355888999999876442 1 1 235666666655 4532 2343432
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGY-DREDGNKAIAEGRADL 342 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 342 (399)
.++.. ...+.|.+++-+....... .....+....+.+.+ ++|+++.||| |++++.++++ | +|.
T Consensus 164 --~~E~~----~a~~~gad~IGvn~~~l~~---~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-G-a~g 232 (254)
T 1vc4_A 164 --ERELE----IALEAGAEVLGINNRDLAT---LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-L-FDA 232 (254)
T ss_dssp --HHHHH----HHHHHTCSEEEEESBCTTT---CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-T-CSE
T ss_pred --HHHHH----HHHHcCCCEEEEccccCcC---CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-C-CCE
Confidence 22221 3445688999886544322 123445566666666 6899999999 7999999999 7 999
Q ss_pred EEechHHhhCCcHHHHHHh
Q 015862 343 VVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 343 V~~gR~~iadPdl~~k~~~ 361 (399)
|.+|++++..+|....+++
T Consensus 233 vlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 233 VLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp EEECHHHHTSSCHHHHHHH
T ss_pred EEEeHHHcCCCCHHHHHHH
Confidence 9999999999998877653
No 243
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.37 E-value=0.0011 Score=60.76 Aligned_cols=126 Identities=12% Similarity=0.000 Sum_probs=80.5
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC--ceEEEecCCcccCCCCCCC
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD--RVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~--~v~vrls~~~~~~~~~~~~ 269 (399)
+.++|+|.|-+|+..| ...+.+.++++++. |.. .++|-+.. ..
T Consensus 78 ~~~~Gad~vtVH~~~g-------------------------~~~l~~a~~~~~~~-g~~~~~~~Vt~lt---------s~ 122 (221)
T 3exr_A 78 NAVRGADWMTCICSAT-------------------------IPTMKAARKAIEDI-NPDKGEIQVELYG---------DW 122 (221)
T ss_dssp HHTTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-CTTTCEEEEECCS---------SC
T ss_pred HHHcCCCEEEEeccCC-------------------------HHHHHHHHHHHHhc-CCCcceEEEEEcC---------CC
Confidence 5779999999997653 12345566666554 422 46776654 12
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEech
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 347 (399)
+.+.. +.+.+.|++++-++.....+...-.....-++.+|+.. +.++.+.||++++++..+++.| +|++.+||
T Consensus 123 ~~~~~----~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aG-ad~~VvG~ 197 (221)
T 3exr_A 123 TYDQA----QQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVD-VFTFIAGR 197 (221)
T ss_dssp CHHHH----HHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCC-CSEEEECH
T ss_pred CHHHH----HHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCC-CCEEEECc
Confidence 33332 23445678877665433221111112233466777765 4668899999999988888888 99999999
Q ss_pred HHhhCCcHHH
Q 015862 348 LFLANPDLPR 357 (399)
Q Consensus 348 ~~iadPdl~~ 357 (399)
+++..+|..+
T Consensus 198 ~I~~a~dp~~ 207 (221)
T 3exr_A 198 GITEAKNPAG 207 (221)
T ss_dssp HHHTSSSHHH
T ss_pred hhhCCCCHHH
Confidence 9997666443
No 244
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.37 E-value=0.0031 Score=65.11 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=67.6
Q ss_pred HHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhC---ceEEEEeCCCcccc-ccc----CCCchhhH
Q 015862 240 VEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG---ILYCHMVEPRMKTR-EEK----SECPHSLL 310 (399)
Q Consensus 240 i~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~G---vd~l~v~~~~~~~~-~~~----~~~~~~~~ 310 (399)
+..+|+..|++ .|++-.+ +.+++ ....+.| +|||-+. +.+... ... +..++.++
T Consensus 98 ~~~ar~~lg~~~iiG~S~h------------t~eea----~~A~~~G~~~aDYv~~G-pvf~T~tK~~~~~~~~G~~~l~ 160 (540)
T 3nl6_A 98 IPMIRKLVGPDMVIGWSVG------------FPEEV----DELSKMGPDMVDYIGVG-TLFPTLTKKNPKKAPMGTAGAI 160 (540)
T ss_dssp HHHHHHHHCTTSEEEEEEC------------SHHHH----HHHHHTCC--CCEEEES-CCSCCCCCC----CCCHHHHHH
T ss_pred HHHHHHHhCCCCEEEEECC------------CHHHH----HHHHHcCCCCCCEEEEc-CCCCCCCCCCcCCCCCCHHHHH
Confidence 34567777876 5777443 23332 2345678 9999874 222211 111 11244566
Q ss_pred HHHhh------cCCcEEEeCCCCHHHHHHHHH--------cCCCcEEEechHHhhCCcHHHHH
Q 015862 311 PMRKA------FKGTFLVAGGYDREDGNKAIA--------EGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 311 ~ir~~------~~~pvi~~Ggit~~~a~~~L~--------~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
.+++. .++||++.|||+++.+.++++ .| +|+|+++++++..+|....+
T Consensus 161 ~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~G-adgvAVvsaI~~a~dp~~a~ 222 (540)
T 3nl6_A 161 RVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRS-LDGICVVSDIIASLDAAKST 222 (540)
T ss_dssp HHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCB-CSCEEESHHHHTCTTHHHHH
T ss_pred HHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccC-ceEEEEeHHHhcCCCHHHHH
Confidence 66665 379999999999999999998 45 99999999999877754433
No 245
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.37 E-value=0.00044 Score=62.43 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=40.8
Q ss_pred chhhHHHHhhcC--CcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 306 PHSLLPMRKAFK--GTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 306 ~~~~~~ir~~~~--~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
++.++.+++.++ +||++.||++++++.++++.| +|.|.+|++++..
T Consensus 135 ~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~G-a~gv~vGsai~~~ 182 (212)
T 2v82_A 135 PQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAG-CAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHT-CSEEEECTTTCCT
T ss_pred HHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcC-CCEEEEChHHhCC
Confidence 456677888776 999999999999999999998 9999999999986
No 246
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=97.34 E-value=0.00014 Score=72.79 Aligned_cols=139 Identities=8% Similarity=0.015 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhC-CCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC-
Q 015862 183 NDFRLAARNAIEAG-FDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF- 259 (399)
Q Consensus 183 ~~f~~aA~~a~~aG-fDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~- 259 (399)
++.++.|+.+.+.| |..++++.+.. +..++.-.+...+.+++||+++|++ .|.|..+..
T Consensus 182 ~~~~~~a~~~~~~G~~~~~KiKvG~~------------------~~~~~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~ 243 (413)
T 1kcz_A 182 DKMIIKEADVLPHALINNVEEKLGLK------------------GEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTI 243 (413)
T ss_dssp HHHHHTTCSEEEECCCCCCCCCCCTT------------------SHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHH
T ss_pred HHHHHHHHHHHHhcchhheeeccCCC------------------ccchhhHHHHHHHHHHHHHHhcCCCceEEEecCCCc
Confidence 44555666666778 99999875420 0002222344678999999999976 456655541
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhh--Cce-EEEEeCCCcccccccCCCchhhHHHHhh-----cCCcEEEeCCC-CHHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKY--GIL-YCHMVEPRMKTREEKSECPHSLLPMRKA-----FKGTFLVAGGY-DRED 330 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~--Gvd-~l~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggi-t~~~ 330 (399)
..+. ..+.++++++++.|++. ++. ||+ +|.... ..+..++..+.+++. +++||++...+ ++++
T Consensus 244 ~~~~----~~~~~~a~~~~~~L~~~~~~i~~~iE--qP~~~~--~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~ 315 (413)
T 1kcz_A 244 GAAF----DVDIKAMADYIQTLAEAAKPFHLRIE--GPMDVE--DRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVED 315 (413)
T ss_dssp HHHT----TTCHHHHHHHHHHHHHHHTTSCEEEE--CSBCCS--SHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHH
T ss_pred cccc----CCCHHHHHHHHHHHHhhcCCcceEEe--cCCCCC--CCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHH
Confidence 0000 03577899999999998 666 777 542100 011235567778888 78999888887 8999
Q ss_pred HHHHHHcCCCcEEEech
Q 015862 331 GNKAIAEGRADLVVYGR 347 (399)
Q Consensus 331 a~~~L~~G~~D~V~~gR 347 (399)
+.++++.+.+|+|-+=-
T Consensus 316 ~~~~i~~~a~d~v~ik~ 332 (413)
T 1kcz_A 316 VKFFTDNKAGHMVQIKT 332 (413)
T ss_dssp HHHHHHTTCSSEEEECT
T ss_pred HHHHHHhCCCCEEEeCc
Confidence 99999999999987743
No 247
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.33 E-value=0.0017 Score=58.82 Aligned_cols=122 Identities=16% Similarity=0.059 Sum_probs=77.3
Q ss_pred HHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec-CCcccCCCCCCC
Q 015862 191 NAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS-PFANYMESGDSN 269 (399)
Q Consensus 191 ~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls-~~~~~~~~~~~~ 269 (399)
.+.++|+|.|-+|+..| ...+.++++.+++. |. .+++.+. .. .
T Consensus 75 ~~~~~Gad~itvh~~~g-------------------------~~~l~~~~~~~~~~-g~-~~~~~ll~~~--------t- 118 (216)
T 1q6o_A 75 MCFEANADWVTVICCAD-------------------------INTAKGALDVAKEF-NG-DVQIELTGYW--------T- 118 (216)
T ss_dssp HHHHTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHT-TC-EEEEEECSCC--------C-
T ss_pred HHHhCCCCEEEEeccCC-------------------------HHHHHHHHHHHHHc-CC-CceeeeeeCC--------C-
Confidence 46679999999997542 11234556667663 32 4566665 31 1
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.. -.+.+++.|++.+-++...+.. +.... ..+.++.+|+.. +.|+++.||++++.+.++++.| +|+|.+|
T Consensus 119 -~~----~~~~l~~~~~~~~vl~~a~~~~~~G~~g-~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aG-ad~ivvG 191 (216)
T 1q6o_A 119 -WE----QAQQWRDAGIGQVVYHRSRDAQAAGVAW-GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIP-IHVFIAG 191 (216)
T ss_dssp -HH----HHHHHHHTTCCEEEEECCHHHHHTTCCC-CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-CSEEEES
T ss_pred -hh----hHHHHHhcCcHHHHHHHHHHHHhcCCCC-CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcC-CCEEEEe
Confidence 11 1223444566655544332211 11111 245667777776 5679999999999999999998 9999999
Q ss_pred hHHhhCCcH
Q 015862 347 RLFLANPDL 355 (399)
Q Consensus 347 R~~iadPdl 355 (399)
|+++..+|.
T Consensus 192 ~~I~~a~dp 200 (216)
T 1q6o_A 192 RSIRDAASP 200 (216)
T ss_dssp HHHHTSSCH
T ss_pred ehhcCCCCH
Confidence 999987664
No 248
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.31 E-value=0.00072 Score=62.31 Aligned_cols=123 Identities=19% Similarity=0.252 Sum_probs=78.3
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..+.++|+|+|-+|+-. + . .-+.++++.+|+. |- .+++-+++. .
T Consensus 74 ~~~~~aGAd~itvh~Ea---------~--~--------------~~~~~~i~~i~~~-G~-k~gv~lnp~---------t 117 (231)
T 3ctl_A 74 AQLARAGADFITLHPET---------I--N--------------GQAFRLIDEIRRH-DM-KVGLILNPE---------T 117 (231)
T ss_dssp HHHHHHTCSEEEECGGG---------C--T--------------TTHHHHHHHHHHT-TC-EEEEEECTT---------C
T ss_pred HHHHHcCCCEEEECccc---------C--C--------------ccHHHHHHHHHHc-CC-eEEEEEECC---------C
Confidence 44567899999999532 0 0 1246788888874 32 467777763 1
Q ss_pred hHHHHHHHHHhhhhhCceEEEEe--CCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 015862 270 PEALGLYMAESLNKYGILYCHMV--EPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADL 342 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 342 (399)
+.+ ..+.+.+ ++|++-+. .+.++.....+...+-++.+|+.. +.++.+.||++++.+.++++.| +|.
T Consensus 118 p~~----~~~~~l~-~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aG-Ad~ 191 (231)
T 3ctl_A 118 PVE----AMKYYIH-KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG-ADV 191 (231)
T ss_dssp CGG----GGTTTGG-GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHT-CCE
T ss_pred cHH----HHHHHHh-cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcC-CCE
Confidence 222 1222222 58887653 222221111122234455666654 5789999999999999999999 999
Q ss_pred EEec-hHHhhCCc
Q 015862 343 VVYG-RLFLANPD 354 (399)
Q Consensus 343 V~~g-R~~iadPd 354 (399)
+.+| ++++..+|
T Consensus 192 ~V~G~saif~~~d 204 (231)
T 3ctl_A 192 FIVGTSGLFNHAE 204 (231)
T ss_dssp EEECTTTTGGGCS
T ss_pred EEEccHHHhCCCC
Confidence 9999 99998666
No 249
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=97.28 E-value=0.00042 Score=69.79 Aligned_cols=101 Identities=15% Similarity=0.154 Sum_probs=72.5
Q ss_pred HHHHHHHHHHh-------CCC-ceEEEecCCcccCCC-------C-CCChHHHHHHHHHhhhh-hCceEEEEeCCCcccc
Q 015862 237 LEIVEAVSNEI-------GAD-RVGIRLSPFANYMES-------G-DSNPEALGLYMAESLNK-YGILYCHMVEPRMKTR 299 (399)
Q Consensus 237 ~eii~avR~~v-------g~~-~v~vrls~~~~~~~~-------~-~~~~~~~~~~l~~~Le~-~Gvd~l~v~~~~~~~~ 299 (399)
.+.+++||+++ |++ .|.|.....+.+... . ...+.++++++++.|++ +++.||+ +|.
T Consensus 219 ~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~i~~iE--ePl---- 292 (431)
T 2fym_A 219 AEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIE--DGL---- 292 (431)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCEEEEE--SCS----
T ss_pred HHHHHHHHHHHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCCceEEE--CCC----
Confidence 67888888888 876 577776222111100 0 12256788999999988 8988877 552
Q ss_pred cccCCCchhhHHHHhhc--CCcEEEeC-CC-CHHHHHHHHHcCCCcEEEe
Q 015862 300 EEKSECPHSLLPMRKAF--KGTFLVAG-GY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 300 ~~~~~~~~~~~~ir~~~--~~pvi~~G-gi-t~~~a~~~L~~G~~D~V~~ 345 (399)
....++..+.+++.+ ++||++.. .+ +++++.++++.+.+|+|.+
T Consensus 293 --~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~i 340 (431)
T 2fym_A 293 --DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILI 340 (431)
T ss_dssp --CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred --CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEE
Confidence 123456778899988 78887776 55 7999999999999999876
No 250
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.25 E-value=0.0013 Score=61.57 Aligned_cols=127 Identities=22% Similarity=0.181 Sum_probs=84.2
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+..++.|.+.|+|.|++..--|+|.+. +...+.+-|.+|+++++...+.+|+=....+
T Consensus 88 v~E~~~Av~~GAdEIDmVinig~l~~g-------------------~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~--- 145 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFPYRALMAG-------------------NEQVGFDLVKACKEACAAANVLLKVIIETGE--- 145 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHTT-------------------CCHHHHHHHHHHHHHHHHTTCEEEEECCHHH---
T ss_pred HHHHHHHHHcCCCEEEEeccHHhhhCC-------------------CHHHHHHHHHHHHHHhcccCCeEEEEEeccc---
Confidence 566788999999999999877665541 2357788899999998632123332211100
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh-----c--CCcEEEeCCC-CHHHHHHHHHc
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA-----F--KGTFLVAGGY-DREDGNKAIAE 337 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~-----~--~~pvi~~Ggi-t~~~a~~~L~~ 337 (399)
..+.+.-...|+...++|+|||-.+.+.. ......+.++.+++. + +++|-++||+ |.++|.++|+.
T Consensus 146 --L~d~e~i~~a~~ia~eaGADfVKTSTGf~----~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~a 219 (260)
T 1p1x_A 146 --LKDEALIRKASEISIKAGADFIKTSTGKV----AVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI 219 (260)
T ss_dssp --HCSHHHHHHHHHHHHHTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHh
Confidence 11222245677777899999999765421 122345555555555 3 4789999999 99999999998
Q ss_pred CCCc
Q 015862 338 GRAD 341 (399)
Q Consensus 338 G~~D 341 (399)
| ++
T Consensus 220 g-a~ 222 (260)
T 1p1x_A 220 A-DE 222 (260)
T ss_dssp H-HH
T ss_pred h-hh
Confidence 7 44
No 251
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=97.25 E-value=0.00091 Score=64.63 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+.+++.|+.+++.||..++|+.+. + ...+.+++||+++ ++ .|.+..|.
T Consensus 134 e~~~~~a~~~~~~G~~~~KiKvg~--------------~-------------~d~~~v~avr~~~-~~~~l~vDaN~--- 182 (324)
T 1jpd_X 134 DQMANSASTLWQAGAKLLKVKLDN--------------H-------------LISERMVAIRTAV-PDATLIVDANE--- 182 (324)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS--------------S-------------CHHHHHHHHHHHC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCC--------------c-------------hHHHHHHHHHHhC-CCCEEEEECcC---
Confidence 345567788888999999998552 0 1266789999998 44 45555443
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRA 340 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 340 (399)
..+.++++++++.|++.++.||+ +|... ...+..+.++ .++||++...+ +++++.++++. +
T Consensus 183 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~~~------~d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~~--~ 244 (324)
T 1jpd_X 183 ------SWRAEGLAARCQLLADLGVAMLE--QPLPA------QDDAALENFI--HPLPICADESCHTRSNLKALKGR--Y 244 (324)
T ss_dssp ------CCCSTTHHHHHHHHHHTTCCEEE--CCSCT------TSCGGGGSSC--CSSCEEESTTCSSGGGHHHHBTT--B
T ss_pred ------CCCHHHHHHHHHHHHhCCCCEEE--CCCCC------CCHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHhh--C
Confidence 12345678899999999999988 55311 1222333333 57888888887 88888888854 7
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
|+|.+
T Consensus 245 ~~i~i 249 (324)
T 1jpd_X 245 EMVNI 249 (324)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 86665
No 252
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=97.16 E-value=0.00036 Score=69.89 Aligned_cols=136 Identities=13% Similarity=0.052 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhC-CCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCccc
Q 015862 185 FRLAARNAIEAG-FDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANY 262 (399)
Q Consensus 185 f~~aA~~a~~aG-fDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~ 262 (399)
.++.+..+.+.| |..+++..+.. +-....-.+...+.+++||+++|++ .|.|..+..-.+
T Consensus 184 ~~~~~~~~~~~G~~~~iK~KvG~~------------------~~~~~~~l~~d~~~v~aiR~~~G~~~~L~vDan~~~~~ 245 (413)
T 1kko_A 184 MILKGVDVLPHALINNVEEKLGFK------------------GEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGL 245 (413)
T ss_dssp HHHTTCSEEEETTCCCCCCCCCTT------------------SHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHH
T ss_pred HHHHHHHHHhCCCccEEEEecCCC------------------hhhHHHHHHHHHHHHHHHHHhhCCCCeEEEECCCcccc
Confidence 344444555667 88887764420 0001112345668999999999876 355555430000
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCce---EEEEeCCCcccccccCCCchhhHHHHhh-----cCCcEEEeCCC-CHHHHHH
Q 015862 263 MESGDSNPEALGLYMAESLNKYGIL---YCHMVEPRMKTREEKSECPHSLLPMRKA-----FKGTFLVAGGY-DREDGNK 333 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd---~l~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggi-t~~~a~~ 333 (399)
.. ..+.++++++++.|++.++. ||+ +|.... ..+..++..+.+++. +++||++...+ +++++.+
T Consensus 246 -~~--~~~~~~A~~~~~~L~~~~~~~~l~iE--qP~~~~--~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~ 318 (413)
T 1kko_A 246 -IF--DMDPVRCAEYIASLEKEAQGLPLYIE--GPVDAG--NKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVD 318 (413)
T ss_dssp -HT--TTCHHHHHHHHHHTGGGGTTSCEEEE--CCCCCS--SHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHH
T ss_pred -cc--CCCHHHHHHHHHHHHhccCCcceEEE--CCcCCC--CCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHH
Confidence 00 23567889999999997644 665 552100 001245567778888 78999888887 8999999
Q ss_pred HHHcCCCcEEEe
Q 015862 334 AIAEGRADLVVY 345 (399)
Q Consensus 334 ~L~~G~~D~V~~ 345 (399)
+++.+.+|+|-+
T Consensus 319 ~i~~~a~d~i~i 330 (413)
T 1kko_A 319 FTDAGSCHMVQI 330 (413)
T ss_dssp HHHTTCCSEEEE
T ss_pred HHHhCCCCEEEe
Confidence 999999999976
No 253
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.15 E-value=0.0083 Score=55.19 Aligned_cols=46 Identities=24% Similarity=0.236 Sum_probs=41.1
Q ss_pred chhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 306 PHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
.+.++.+++.+++||++.||+ +++++.++++.| +|.|.+|++++..
T Consensus 180 ~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~G-ad~vivGsai~~~ 226 (248)
T 1geq_A 180 YDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEG-ANGVVVGSALVKI 226 (248)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcC-CCEEEEcHHHHhh
Confidence 457788999889999999999 579999999998 9999999999875
No 254
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.15 E-value=0.014 Score=55.20 Aligned_cols=134 Identities=13% Similarity=0.018 Sum_probs=89.0
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+.-|+.|++.|+|.|++-.--|.|+++ ...+...+.+-|++|++++++..+.|=|-..
T Consensus 103 ~~Ea~~Av~~GAdEIDmVinig~lk~~----------------~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~------ 160 (297)
T 4eiv_A 103 SLEAVGALKDGADEIECLIDWRRMNEN----------------VADGESRIRLLVSEVKKVVGPKTLKVVLSGG------ 160 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCTHHHHHC----------------HHHHHHHHHHHHHHHHHHHTTSEEEEECCSS------
T ss_pred HHHHHHHHHcCCCEEEeeeeHHHHhcc----------------cCCcHHHHHHHHHHHHHHhcCCceEEEEecc------
Confidence 556788999999999988776665551 2356788999999999999753343323221
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc------------------------CCcEE
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF------------------------KGTFL 321 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~------------------------~~pvi 321 (399)
.-.+.+.....|+...++|+|||-.+.+.. ......+.++.+++.+ .+-|=
T Consensus 161 -~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvK 235 (297)
T 4eiv_A 161 -ELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIK 235 (297)
T ss_dssp -CCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHHCC------------------CCEEE
T ss_pred -cCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEE
Confidence 111223245677777889999998765521 1223445555555444 24477
Q ss_pred Ee-CCC-CHHHHHHHHH-----------cCCCcEEEech
Q 015862 322 VA-GGY-DREDGNKAIA-----------EGRADLVVYGR 347 (399)
Q Consensus 322 ~~-Ggi-t~~~a~~~L~-----------~G~~D~V~~gR 347 (399)
++ ||| |.++|.++|+ .+ ..-++..+
T Consensus 236 As~GGIrt~e~A~~~i~~~~elG~~wl~~~-~fRiGaSs 273 (297)
T 4eiv_A 236 IEVGDVHMAETADFLMQMIFENGPRSIVRD-KFRVGGGF 273 (297)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHCGGGCSTT-TEEEEECH
T ss_pred ecCCCCCCHHHHHHHHHHHHHhCccccCCC-ceEecccH
Confidence 77 999 8999999998 44 55677777
No 255
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.14 E-value=0.0039 Score=59.50 Aligned_cols=109 Identities=17% Similarity=0.011 Sum_probs=75.7
Q ss_pred ccCCCCCCCCch--hhhhHH---HHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 218 VNDRTDQYGGSL--ENRCRF---ALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 218 ~N~R~D~yGGsl--enR~r~---~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
.|+|...+.+-+ +|...+ +.+-++++|+..+...|.|-+. +.++..+ ..+.|+|+|-++
T Consensus 172 ~~hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev~------------tlee~~e----A~~aGaD~I~ld 235 (296)
T 1qap_A 172 ANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVE------------NLDELDD----ALKAGADIIMLD 235 (296)
T ss_dssp BCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEES------------SHHHHHH----HHHTTCSEEEES
T ss_pred hhhccccccEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEeC------------CHHHHHH----HHHcCCCEEEEC
Confidence 567777777643 466666 5788899999887534555332 2333222 235799999875
Q ss_pred CCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.. ..+.++.+++.+ ++++.++||+|++.+.++.+.| +|+|++|.....-|
T Consensus 236 ~~----------~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~G-vD~isvGsli~~a~ 287 (296)
T 1qap_A 236 NF----------NTDQMREAVKRVNGQARLEVSGNVTAETLREFAETG-VDFISVGALTKHVR 287 (296)
T ss_dssp SC----------CHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTT-CSEEECSHHHHEEE
T ss_pred CC----------CHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 32 234555555556 4789999999999999999999 89999999654433
No 256
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.12 E-value=0.0025 Score=57.90 Aligned_cols=112 Identities=14% Similarity=0.120 Sum_probs=77.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc-eEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR-VGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~-v~vrls~~~~~~~ 264 (399)
.+.+..|.++|+|+| |.++ + | .+++++.|+ .|.+. +++ .
T Consensus 78 ~d~~~~A~~aGAd~v--~~p~-----------~----d-------------~~v~~~~~~-~g~~~i~G~--~------- 117 (214)
T 1wbh_A 78 PQQLAEVTEAGAQFA--ISPG-----------L----T-------------EPLLKAATE-GTIPLIPGI--S------- 117 (214)
T ss_dssp HHHHHHHHHHTCSCE--EESS-----------C----C-------------HHHHHHHHH-SSSCEEEEE--S-------
T ss_pred HHHHHHHHHcCCCEE--EcCC-----------C----C-------------HHHHHHHHH-hCCCEEEec--C-------
Confidence 467889999999999 3222 1 1 466666665 56442 342 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-CchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-CPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADL 342 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~ 342 (399)
+.++ + ....+.|+||+-+.. .... ...+++.++..+ ++|+++.||++++.+.++++.|.++.
T Consensus 118 -----t~~e---~-~~A~~~Gad~v~~Fp-------a~~~gG~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~ 181 (214)
T 1wbh_A 118 -----TVSE---L-MLGMDYGLKEFKFFP-------AEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC 181 (214)
T ss_dssp -----SHHH---H-HHHHHTTCCEEEETT-------TTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSC
T ss_pred -----CHHH---H-HHHHHCCCCEEEEec-------CccccCHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeE
Confidence 1222 2 233468999999832 1111 146788899988 69999999999999999999966999
Q ss_pred EEechHHhhCCc
Q 015862 343 VVYGRLFLANPD 354 (399)
Q Consensus 343 V~~gR~~iadPd 354 (399)
|+ ++.++..++
T Consensus 182 v~-gS~i~~~~~ 192 (214)
T 1wbh_A 182 IG-GSWLVPADA 192 (214)
T ss_dssp EE-EGGGSCHHH
T ss_pred EE-eccccChhh
Confidence 99 888876543
No 257
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.08 E-value=0.0072 Score=56.93 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=38.2
Q ss_pred hhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 307 HSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 307 ~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
++++.+|+..++||+++||+ |++++.++ .+ +|.|.+|.++...
T Consensus 192 ~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~-ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 192 DLVRRIKARTALPVAVGFGVSGKATAAQA--AV-ADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHHHTTCCSCEEEESCCCSHHHHHHH--TT-SSEEEECHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cC-CCEEEEChHHhcc
Confidence 57788999889999999999 79999996 66 9999999998864
No 258
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.07 E-value=0.01 Score=69.89 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhCCCE--EEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCccc
Q 015862 185 FRLAARNAIEAGFDG--VELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY 262 (399)
Q Consensus 185 f~~aA~~a~~aGfDg--VeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~ 262 (399)
+.+....+.+.|.+. |.+.+|. |. ..++++.+++. |-..+.+ -+
T Consensus 655 ~~~~~~~~~~~gv~i~gv~~~~G~---------p~------------------~e~~~~~l~~~-gi~~i~~--v~---- 700 (2060)
T 2uva_G 655 QIPLLGRLRADGVPIEGLTIGAGV---------PS------------------IEVANEYIQTL-GIRHISF--KP---- 700 (2060)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESSC---------CC------------------HHHHHHHHHHS-CCSEEEE--CC----
T ss_pred HHHHHHHHHHcCCCcceEeecCCC---------CC------------------HHHHHHHHHHc-CCeEEEe--cC----
Confidence 345566777889998 7776544 21 12455555554 4322322 11
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCceEEE---EeCCCcccccc-c---CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHH
Q 015862 263 MESGDSNPEALGLYMAESLNKYGILYCH---MVEPRMKTREE-K---SECPHSLLPMRKAFKGTFLVAGGY-DREDGNKA 334 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd~l~---v~~~~~~~~~~-~---~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~ 334 (399)
...++...+..++++|+|.+- +..+..+.-.. . ......+..|++.+++|||+.||| |.+++.++
T Consensus 701 -------~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aa 773 (2060)
T 2uva_G 701 -------GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPY 773 (2060)
T ss_dssp -------CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHH
Confidence 124567777778899999876 43322111001 0 112346778999999999999999 99999999
Q ss_pred H-----------HcCCCcEEEechHHhhCC
Q 015862 335 I-----------AEGRADLVVYGRLFLANP 353 (399)
Q Consensus 335 L-----------~~G~~D~V~~gR~~iadP 353 (399)
| .-| +|.|.||+.+++-.
T Consensus 774 ltg~ws~~~g~palG-AdgV~~GT~f~~t~ 802 (2060)
T 2uva_G 774 LTGSWSTKFGYPPMP-FDGCMFGSRMMTAK 802 (2060)
T ss_dssp HHTCGGGTTTSCCCC-CSCEEESGGGGGBT
T ss_pred hcCcchhhcCCCCCC-CCEEEEchhhhcCc
Confidence 9 888 99999999999865
No 259
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.07 E-value=0.0011 Score=61.27 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=77.8
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh--------CCCceEEEecCCc
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI--------GADRVGIRLSPFA 260 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v--------g~~~v~vrls~~~ 260 (399)
+..+.++|+|+|=+|.... ..+.++++.+|+.- | -.+++-+++.
T Consensus 85 i~~~~~aGAd~itvH~ea~--------------------------~~~~~~i~~i~~~~~~~~~~~~g-~~~gv~l~p~- 136 (237)
T 3cu2_A 85 AKAVVANGANLVTLQLEQY--------------------------HDFALTIEWLAKQKTTYANQVYP-VLIGACLCPE- 136 (237)
T ss_dssp HHHHHHTTCSEEEEETTCT--------------------------TSHHHHHHHHTTCEEEETTEEEE-CEEEEEECTT-
T ss_pred HHHHHHcCCCEEEEecCCc--------------------------ccHHHHHHHHHhcccccccccCC-ceEEEEEeCC-
Confidence 3445689999999996541 12456777777641 2 1467767652
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEe--CCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHH
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMV--EPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNK 333 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~ 333 (399)
.+.+ ..+.+.+ ++|++-+- .+.++.....+...+-++++|+.. +.++.+-||++.+.+..
T Consensus 137 --------Tp~~----~l~~~l~-~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~ 203 (237)
T 3cu2_A 137 --------TPIS----ELEPYLD-QIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKY 203 (237)
T ss_dssp --------SCGG----GGTTTTT-TCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHH
T ss_pred --------ChHH----HHHHHhh-cCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHH
Confidence 1222 1112212 58888541 122221111111234456666665 57899999999999999
Q ss_pred HHH--cCCCcEEEechHHhhCCcHH
Q 015862 334 AIA--EGRADLVVYGRLFLANPDLP 356 (399)
Q Consensus 334 ~L~--~G~~D~V~~gR~~iadPdl~ 356 (399)
+++ .| +|.+.+|++++.. |..
T Consensus 204 ~~~~~aG-ad~~VvGSaIf~~-d~~ 226 (237)
T 3cu2_A 204 FKQGTHQ-IDWLVSGSALFSG-ELK 226 (237)
T ss_dssp HHHSSSC-CCCEEECGGGGSS-CHH
T ss_pred HHHhCCC-CcEEEEeeHHhCC-CHH
Confidence 999 98 9999999999975 543
No 260
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.02 E-value=0.0014 Score=60.20 Aligned_cols=110 Identities=18% Similarity=0.090 Sum_probs=74.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~ 264 (399)
.+.+..|.++|+|+| |.++ + | .+++++.|+ .|.+ .+++ .
T Consensus 88 ~d~~~~A~~aGAd~v--~~p~-----------~----d-------------~~v~~~~~~-~g~~~i~G~--~------- 127 (225)
T 1mxs_A 88 RSMFAAVEAAGAQFV--VTPG-----------I----T-------------EDILEAGVD-SEIPLLPGI--S------- 127 (225)
T ss_dssp HHHHHHHHHHTCSSE--ECSS-----------C----C-------------HHHHHHHHH-CSSCEECEE--C-------
T ss_pred HHHHHHHHHCCCCEE--EeCC-----------C----C-------------HHHHHHHHH-hCCCEEEee--C-------
Confidence 477889999999999 3322 1 1 466666655 5644 2342 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 343 (399)
+.++ + ....+.|+||+-+.. . ...-...+++.++..+ ++|+++.||++++.+.++++.+.+|.|
T Consensus 128 -----t~~e---~-~~A~~~Gad~vk~FP----a--~~~~G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 128 -----TPSE---I-MMGYALGYRRFKLFP----A--EISGGVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp -----SHHH---H-HHHHTTTCCEEEETT----H--HHHTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCE
T ss_pred -----CHHH---H-HHHHHCCCCEEEEcc----C--ccccCHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEE
Confidence 1232 2 233468999999721 0 0000246788888888 699999999999999999994349999
Q ss_pred EechHHhh
Q 015862 344 VYGRLFLA 351 (399)
Q Consensus 344 ~~gR~~ia 351 (399)
+ ++.++.
T Consensus 193 ~-gSai~~ 199 (225)
T 1mxs_A 193 G-TTWMLD 199 (225)
T ss_dssp E-ECTTSC
T ss_pred E-EchhcC
Confidence 9 888775
No 261
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.95 E-value=0.0041 Score=55.77 Aligned_cols=86 Identities=14% Similarity=0.005 Sum_probs=62.3
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+...|+..+-++.-.......+ .....+..+++..++|+++.|++ +++++.++++.| +|.|.+|++++..
T Consensus 132 ~~~~i~~~~~~~~~~vli~~~~~~g~~~g-~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G-~~~~~vg~a~~~~ 209 (237)
T 3cwo_X 132 LRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFR 209 (237)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTCCSC-CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESHHHHTT
T ss_pred HHHHHHHHhhcCCCeEEEEecCCCCcccc-ccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC-cHHHhhhHHHHcC
Confidence 35567777777776554432111111111 12556778888889999999999 799999999988 9999999999999
Q ss_pred CcHHHHHHh
Q 015862 353 PDLPRRFEL 361 (399)
Q Consensus 353 Pdl~~k~~~ 361 (399)
|+-+.++++
T Consensus 210 ~~~~~~~~~ 218 (237)
T 3cwo_X 210 EIDVRELKE 218 (237)
T ss_dssp SSCHHHHHH
T ss_pred CCCHHHHHH
Confidence 977777654
No 262
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.90 E-value=0.0042 Score=57.80 Aligned_cols=151 Identities=12% Similarity=0.089 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhh----------hHHHHHHHHHHHHHhCCCce
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENR----------CRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR----------~r~~~eii~avR~~vg~~~v 252 (399)
+.+.+.++...++|+|.|||-... ++---| |-.+.+. .+-++++++++|+.+ |+
T Consensus 28 ~~t~~~~~~l~~~GaD~iElGiPf-----------SDP~aD--GpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~---Pi 91 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILELGVAY-----------SDPIAD--GEIIADAAKIALDQGVDIHSVFELLARIKTKK---AL 91 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEEECCC-----------SCCCSC--CCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSS---EE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-----------CCCCCC--cHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCC---CE
Confidence 456777777888999999998643 333333 4444322 245677777777542 43
Q ss_pred EE--EecCC-----cccC---------CC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-----------c--c--
Q 015862 253 GI--RLSPF-----ANYM---------ES-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-----------R--E-- 300 (399)
Q Consensus 253 ~v--rls~~-----~~~~---------~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-----------~--~-- 300 (399)
.+ =.|+. +.|. +. -.+.+.++..++.+.+.+.|++.+.+..++.+. . |
T Consensus 92 vlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 92 VFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE
T ss_pred EEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 33 12210 0000 00 112355556667777788888877665543210 0 0
Q ss_pred -----ccCC------CchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 301 -----EKSE------CPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 301 -----~~~~------~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
.... ..+.++.+|+.++.||++++|+ |++++.++.+ + +|.|.+|.+++.
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~-ADGVIVGSAiVk 232 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-V-ADGVIVGTSIVK 232 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-T-SSEEEECHHHHH
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-c-CCEEEECHHHHH
Confidence 0000 1235678899889999999999 8999988764 5 999999999874
No 263
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.90 E-value=0.0027 Score=59.97 Aligned_cols=90 Identities=10% Similarity=-0.015 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh
Q 015862 237 LEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA 315 (399)
Q Consensus 237 ~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~ 315 (399)
.+-++++|+..+.. .|.+-+. +.++..+. .+.|+|+|-+... .++.++.+++.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A----~~aGaD~I~ld~~----------~~~~l~~~v~~ 222 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE------------SFEEAKNA----MNAGADIVMCDNL----------SVLETKEIAAY 222 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES------------SHHHHHHH----HHHTCSEEEEETC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEcC------------CHHHHHHH----HHcCCCEEEECCC----------CHHHHHHHHHH
Confidence 67788999988754 4665322 23333322 2479999987532 12344433333
Q ss_pred c-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 316 F-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 316 ~-----~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
+ ++|+.++||+|++.+.++++.| +|+|++|..+..-|
T Consensus 223 l~~~~~~~~i~AsGGI~~~ni~~~~~aG-aD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 223 RDAHYPFVLLEASGNISLESINAYAKSG-VDAISVGALIHQAT 264 (273)
T ss_dssp HHHHCTTCEEEEESSCCTTTHHHHHTTT-CSEEECTHHHHTCC
T ss_pred hhccCCCcEEEEECCCCHHHHHHHHHcC-CcEEEEcHHhcCCC
Confidence 3 2789999999999999999999 89999999877555
No 264
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.86 E-value=0.0018 Score=67.32 Aligned_cols=88 Identities=16% Similarity=0.063 Sum_probs=68.0
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcc--cccccCCCchhhHHHHhhcCCcEEEeCCC-CH-----------HHHHHHHHcC
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMK--TREEKSECPHSLLPMRKAFKGTFLVAGGY-DR-----------EDGNKAIAEG 338 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~--~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~-----------~~a~~~L~~G 338 (399)
+..++|+.+++.|++.+|+..-.-. .+.......+.++.+++.+++||++.||+ +. ++++.+++.|
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG 360 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG 360 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC
Confidence 5678999999999999987542211 01111223556778888889999999999 76 6699999999
Q ss_pred CCcEEEechHHhh-------------CCcHHHHHHh
Q 015862 339 RADLVVYGRLFLA-------------NPDLPRRFEL 361 (399)
Q Consensus 339 ~~D~V~~gR~~ia-------------dPdl~~k~~~ 361 (399)
+|.|.++..++. +|++++++.+
T Consensus 361 -ad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 361 -ADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp -CSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred -CCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 999999999988 5899999887
No 265
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=96.85 E-value=0.0028 Score=63.55 Aligned_cols=102 Identities=12% Similarity=0.141 Sum_probs=71.9
Q ss_pred HHHHHHHHHHH---hCCC-ceEEEecCCcccCCC-----CCCChHHHHHHHHHh-hhhhCceEEEEeCCCcccccccCCC
Q 015862 236 ALEIVEAVSNE---IGAD-RVGIRLSPFANYMES-----GDSNPEALGLYMAES-LNKYGILYCHMVEPRMKTREEKSEC 305 (399)
Q Consensus 236 ~~eii~avR~~---vg~~-~v~vrls~~~~~~~~-----~~~~~~~~~~~l~~~-Le~~Gvd~l~v~~~~~~~~~~~~~~ 305 (399)
+.-++++||++ +|++ .|.+.....+.+... ....+.++++++++. |+++++.||+ +|. ....
T Consensus 221 l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE--dPl------~~dD 292 (428)
T 3tqp_A 221 FELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE--DGL------SEND 292 (428)
T ss_dssp HHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE--CCS------CTTC
T ss_pred HHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe--CCC------Cccc
Confidence 34458999999 9987 588887543322211 012356778889887 8999988887 542 2235
Q ss_pred chhhHHHHhhcCCcEEEeC-C-C--CHHHHHHHHHcCCCcEEEe
Q 015862 306 PHSLLPMRKAFKGTFLVAG-G-Y--DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~G-g-i--t~~~a~~~L~~G~~D~V~~ 345 (399)
++..+.+++.++.||..+| . + +++++.++|+.+.||+|-+
T Consensus 293 ~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 293 WAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 6677889999887764333 3 3 6999999999999998865
No 266
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.83 E-value=0.0024 Score=58.78 Aligned_cols=55 Identities=11% Similarity=0.187 Sum_probs=49.5
Q ss_pred CchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 305 CPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 305 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
..+.++.+|+.+ +.|++++||| |+++|+++++ | +|.|.+|.+++.||+...++.+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-g-AD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-I-ADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-T-SSEEEECTHHHHCHHHHHHTTC
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-C-CCEEEECCceecCHHHHHHHHH
Confidence 467889999999 8999999999 8999998876 6 9999999999999998888754
No 267
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.79 E-value=0.011 Score=54.23 Aligned_cols=108 Identities=15% Similarity=0.207 Sum_probs=69.7
Q ss_pred HHHHHH---HHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhC-ceEEEEeC--CCcccccccCCCchhh
Q 015862 236 ALEIVE---AVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG-ILYCHMVE--PRMKTREEKSECPHSL 309 (399)
Q Consensus 236 ~~eii~---avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~G-vd~l~v~~--~~~~~~~~~~~~~~~~ 309 (399)
+.++++ .+|+. |- .++|-+++. .+.+ .++.+.+.| +|++-+.. +.++.....+...+-+
T Consensus 100 ~~~~i~~~~~i~~~-G~-k~gvalnp~---------tp~~----~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki 164 (227)
T 1tqx_A 100 TERCIQLAKEIRDN-NL-WCGISIKPK---------TDVQ----KLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKV 164 (227)
T ss_dssp HHHHHHHHHHHHTT-TC-EEEEEECTT---------SCGG----GGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHH
T ss_pred HHHHHHHHHHHHHc-CC-eEEEEeCCC---------CcHH----HHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHH
Confidence 356677 77764 32 577777762 1222 233344554 89985432 2222111122234456
Q ss_pred HHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 310 LPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 310 ~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
+++|+.. +.++.+.||++++.+..+++.| +|.+.+|++++..+|..+.+
T Consensus 165 ~~lr~~~~~~~I~VdGGI~~~ti~~~~~aG-Ad~~V~GsaIf~~~d~~~~i 214 (227)
T 1tqx_A 165 SFLRKKYKNLNIQVDGGLNIETTEISASHG-ANIIVAGTSIFNAEDPKYVI 214 (227)
T ss_dssp HHHHHHCTTCEEEEESSCCHHHHHHHHHHT-CCEEEESHHHHTCSSHHHHH
T ss_pred HHHHHhccCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHH
Confidence 6777776 5789999999999999999999 99999999999877754433
No 268
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.73 E-value=0.016 Score=53.07 Aligned_cols=137 Identities=17% Similarity=0.166 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEe
Q 015862 178 IPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRL 256 (399)
Q Consensus 178 I~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrl 256 (399)
|...++.|++ .+.++|+|.|-+|+-.| . ..+...++.+++. |.. .+...+
T Consensus 76 ipnTv~~~~~---~~~~~gad~vtvh~~~G--------------------~-----~~l~~~~~~~~~~-g~~v~vLt~~ 126 (228)
T 3m47_A 76 IPETNEKICR---ATFKAGADAIIVHGFPG--------------------A-----DSVRACLNVAEEM-GREVFLLTEM 126 (228)
T ss_dssp CHHHHHHHHH---HHHHTTCSEEEEESTTC--------------------H-----HHHHHHHHHHHHH-TCEEEEECCC
T ss_pred cHhHHHHHHH---HHHhCCCCEEEEeccCC--------------------H-----HHHHHHHHHHHhc-CCCeEEEEeC
Confidence 3344444544 44568999999996543 1 2334445555432 432 233344
Q ss_pred cCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCC-cEEEeCCCCHH--HHHH
Q 015862 257 SPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKG-TFLVAGGYDRE--DGNK 333 (399)
Q Consensus 257 s~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~--~a~~ 333 (399)
+..+ .. ..-.+....+++...+.|++-+-++.. ..+.++.||+.++. ..+.+.|+.++ +. +
T Consensus 127 s~~~-~~----~~~~~~~~~~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~ 190 (228)
T 3m47_A 127 SHPG-AE----MFIQGAADEIARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFLISPGVGAQGGDP-G 190 (228)
T ss_dssp CSGG-GG----TTHHHHHHHHHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEEEECC----------
T ss_pred CCcc-HH----HHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEEEecCcCcCCCCH-h
Confidence 4311 10 111233455677777888876554211 23456778888864 45577777433 55 7
Q ss_pred HHHcCCCcEEEechHHhhCCcHHHHHH
Q 015862 334 AIAEGRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
+++.| +|++.+||+++..+|....++
T Consensus 191 ~~~aG-ad~iVvGr~I~~a~dp~~a~~ 216 (228)
T 3m47_A 191 ETLRF-ADAIIVGRSIYLADNPAAAAA 216 (228)
T ss_dssp CGGGT-CSEEEECHHHHTSSCHHHHHH
T ss_pred HHHcC-CCEEEECHHHhCCCCHHHHHH
Confidence 78888 999999999998777655443
No 269
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.71 E-value=0.014 Score=55.80 Aligned_cols=137 Identities=12% Similarity=0.097 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFAN 261 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~vg~~-~v~vrls~~~~ 261 (399)
+..+.+++.+++|++||.|-.+-+ .+|....+| .+-.. .-..+.|++++++ +.+ .|.-|.-...
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~-----------~krcGh~~gk~l~~~-~e~~~rI~Aa~~A-~~~~~I~ARtda~~- 170 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQL-----------PKKCGHLNGKKLVTT-EELVQKIKAIKEV-APSLYIVARTDARG- 170 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCS-----------SCCTTCTTCCCBCCH-HHHHHHHHHHHHH-CTTSEEEEEECCHH-
T ss_pred HHHHHHHHHHHhCCcEEEECCCCC-----------CcccCCCCCCcccCH-HHHHHHHHHHHHc-CCCeEEEEeecccc-
Confidence 346678888999999999987642 244444343 23222 2345667777777 555 4666764310
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe---CCCCH-HHHHHHHHc
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA---GGYDR-EDGNKAIAE 337 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L~~ 337 (399)
....+++++-++.++++|+|.|-+... +..+.++.+.+.+++|++++ ++-|| -..+++-+-
T Consensus 171 ------~~g~~~ai~Ra~ay~eAGAD~i~~e~~---------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~l 235 (305)
T 3ih1_A 171 ------VEGLDEAIERANAYVKAGADAIFPEAL---------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANM 235 (305)
T ss_dssp ------HHCHHHHHHHHHHHHHHTCSEEEETTC---------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHT
T ss_pred ------ccCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHc
Confidence 113678899999999999999886432 23467888999999998754 33232 123444455
Q ss_pred CCCcEEEechHHh
Q 015862 338 GRADLVVYGRLFL 350 (399)
Q Consensus 338 G~~D~V~~gR~~i 350 (399)
| +.+|.++-.++
T Consensus 236 G-v~~v~~~~~~~ 247 (305)
T 3ih1_A 236 G-FQMVIYPVTSL 247 (305)
T ss_dssp T-CSEEEECSHHH
T ss_pred C-CCEEEEchHHH
Confidence 6 99999986554
No 270
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.70 E-value=0.037 Score=51.33 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=44.9
Q ss_pred hhHHHHhhcC--CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 308 SLLPMRKAFK--GTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 308 ~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
....+.+.++ ..+|+-+|| |++++..+.+.| +|.|-+|..++..||-.+++.+|..
T Consensus 193 ~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G-~~a~LVGealmr~~d~~~~Li~G~~ 251 (258)
T 4a29_A 193 NQRKLISMIPSNVVKVAKLGISERNEIEELRKLG-VNAFLISSSLMRNPEKIKELIEGSL 251 (258)
T ss_dssp HHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT-CCEEEECHHHHHCTTHHHHHHC---
T ss_pred HHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC-CCEEEECHHHhCCCcHHHHHHcCch
Confidence 4455666654 457777899 999999999998 9999999999999999999998853
No 271
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.69 E-value=0.0069 Score=57.85 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=69.1
Q ss_pred cCCCCCCCCc--hhhhhHHH---HHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 219 NDRTDQYGGS--LENRCRFA---LEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 219 N~R~D~yGGs--lenR~r~~---~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
|+|...+..- ..|...+. .+-++++|+..+.. .|.+-+. +.++..+. .+.|+|+|-++
T Consensus 161 ~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A----~~aGaD~I~ld 224 (299)
T 2jbm_A 161 SHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFALKVEVECS------------SLQEAVQA----AEAGADLVLLD 224 (299)
T ss_dssp CCCCSTTSSEEECHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEES------------SHHHHHHH----HHTTCSEEEEE
T ss_pred ceecCccceEEecccHHHHcCCHHHHHHHHHHhCCcCCeEEEecC------------CHHHHHHH----HHcCCCEEEEC
Confidence 4455444432 23444443 67889999998854 4555222 23333222 24799999875
Q ss_pred CCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.. .++.++.+++.+ .+++.++||+|++.+.++++.| +|.|++|......|
T Consensus 225 ~~----------~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aG-aD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 225 NF----------KPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPH-IDVISMGMLTQAAP 279 (299)
T ss_dssp SC----------CHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTT-CCEEECTHHHHSCC
T ss_pred CC----------CHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCC-CCEEEEChhhcCCC
Confidence 42 123444333333 2789999999999999999999 89999999665434
No 272
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.67 E-value=0.012 Score=53.43 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=49.7
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHH----------HHHHHHcCCCc
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDRED----------GNKAIAEGRAD 341 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~----------a~~~L~~G~~D 341 (399)
+....+++. .+.|+| +-++ + +.++.+|+.++.+ +.++|+.++. .++ ++.| +|
T Consensus 126 ~~v~~~a~~-~e~G~d-vV~~-~------------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aG-ad 187 (213)
T 1vqt_A 126 DYMDRIEKL-NKLGCD-FVLP-G------------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE-MKGI-AN 187 (213)
T ss_dssp HHHHHHHHH-HHHTCE-EECC-H------------HHHHHHTTTCCSC-EEECCBC---------CCBCHHH-HTTT-CS
T ss_pred HHHHHHHHH-hcCCCE-EEEc-H------------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-HHCC-CC
Confidence 556677888 889998 3221 0 3566788888777 7778875544 466 8887 99
Q ss_pred EEEechHHhhCCcHHHHHH
Q 015862 342 LVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~ 360 (399)
+|.+||+++..+|-.+.++
T Consensus 188 ~iVvGR~I~~a~dP~~aa~ 206 (213)
T 1vqt_A 188 FAVLGREIYLSENPREKIK 206 (213)
T ss_dssp EEEESHHHHTSSCHHHHHH
T ss_pred EEEEChhhcCCCCHHHHHH
Confidence 9999999998887655443
No 273
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=96.67 E-value=0.001 Score=64.24 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=73.9
Q ss_pred hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHH
Q 015862 195 AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEAL 273 (399)
Q Consensus 195 aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~ 273 (399)
.||..++|+.|.. + .+--.+.+++||++++ + .+.+..|. ..+.++
T Consensus 127 ~G~~~~KiKvG~~--------------------~----~~~d~~~v~avr~~~~-~~~l~vDaN~---------~~~~~~ 172 (322)
T 1r6w_A 127 PGEKVAKVRVGLY--------------------E----AVRDGMVVNLLLEAIP-DLHLRLDANR---------AWTPLK 172 (322)
T ss_dssp CSSEEEEEECSSS--------------------C----HHHHHHHHHHHHHHCT-TEEEEEECTT---------CBCHHH
T ss_pred CCCceEEEEeCCC--------------------C----HHHHHHHHHHHHHhCC-CCeEEEeCCC---------CCCHHH
Confidence 6999999986531 1 2344689999999984 4 34444433 235678
Q ss_pred HHHHHHhhhhh---CceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 274 GLYMAESLNKY---GILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 274 ~~~l~~~Le~~---Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
++++++.|++. ++.|++ +|.. ..+..+.+++.+++||++...+ +.+ . ..++.+.+|+|.+
T Consensus 173 A~~~~~~l~~~~~~~i~~iE--qP~~--------~~~~~~~l~~~~~ipIa~dE~~~~~~-~-~~~~~~a~d~i~i 236 (322)
T 1r6w_A 173 GQQFAKYVNPDYRDRIAFLE--EPCK--------TRDDSRAFARETGIAIAWDESLREPD-F-AFVAEEGVRAVVI 236 (322)
T ss_dssp HHHHHHTSCTTTGGGEEEEE--CCBS--------SHHHHHHHHHHHCCCEEESGGGGSTT-C-CCCCCTTEEEEEE
T ss_pred HHHHHHHhhhhccCCeeEEE--CCCC--------ChHHHHHHHHhCCCCEEeCCCCCChh-H-hhhhcCCCCEEEE
Confidence 99999999998 888888 5521 2345677888889999888777 643 4 5556777887765
No 274
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=96.65 E-value=0.0099 Score=59.93 Aligned_cols=101 Identities=17% Similarity=0.141 Sum_probs=72.8
Q ss_pred HHHHHHHHHHh-------CCC-ceEEEecCCcccC--CCCC-----------CChHHHHHHHHHhhhh-hCceEEEEeCC
Q 015862 237 LEIVEAVSNEI-------GAD-RVGIRLSPFANYM--ESGD-----------SNPEALGLYMAESLNK-YGILYCHMVEP 294 (399)
Q Consensus 237 ~eii~avR~~v-------g~~-~v~vrls~~~~~~--~~~~-----------~~~~~~~~~l~~~Le~-~Gvd~l~v~~~ 294 (399)
.+.|++||+++ |++ .|.|.....+.+. ...+ ..+.++++++++.|++ +++.||+ +|
T Consensus 226 ~~~l~avreav~~agy~pG~dv~L~vDaaas~~~~~~n~~y~~~~n~~~~~~~~t~~eai~~~~~l~~~~~i~~iE--eP 303 (444)
T 1w6t_A 226 EDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIE--DG 303 (444)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCEEEEE--SC
T ss_pred HHHHHHHHHHHHHhccCCCCCcEEEEEccchhcccccCCceeeccccCcccCCCCHHHHHHHHHHHHHhCCcEEEE--CC
Confidence 67888888888 876 5777763322221 1110 0356788999999864 8888887 55
Q ss_pred CcccccccCCCchhhHHHHhhc--CCcEEEeCC-C-CHHHHHHHHHcCCCcEEEe
Q 015862 295 RMKTREEKSECPHSLLPMRKAF--KGTFLVAGG-Y-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 295 ~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Gg-i-t~~~a~~~L~~G~~D~V~~ 345 (399)
. ....++..+.+++.+ ++||++... + +++++.++++.+.+|+|-+
T Consensus 304 l------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 352 (444)
T 1w6t_A 304 M------DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILI 352 (444)
T ss_dssp S------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred C------ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEE
Confidence 2 223566778899998 889988887 6 7999999999999999876
No 275
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.65 E-value=0.012 Score=58.26 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccC-CCchhhHHH
Q 015862 234 RFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKS-ECPHSLLPM 312 (399)
Q Consensus 234 r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~-~~~~~~~~i 312 (399)
.+..++++.+++. | .++.+.+++. . ..+.++.+++.|+|++.++..........+ ..+..+.++
T Consensus 142 ~~~~~~i~~~~~~-g-~~v~~~v~~~---------~----~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l 206 (393)
T 2qr6_A 142 ELLSERIAQVRDS-G-EIVAVRVSPQ---------N----VREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEF 206 (393)
T ss_dssp HHHHHHHHHHHHT-T-SCCEEEECTT---------T----HHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHH
T ss_pred HHHHHHHHHHhhc-C-CeEEEEeCCc---------c----HHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHH
Confidence 4567788888886 3 3567766641 1 234566777789999877633211111111 134557889
Q ss_pred HhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEech
Q 015862 313 RKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 313 r~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 347 (399)
++.+++||++.|..|+++|+.+++.| +|.|.+|+
T Consensus 207 ~~~~~~pvi~ggi~t~e~a~~~~~~G-ad~i~vg~ 240 (393)
T 2qr6_A 207 IGSLDVPVIAGGVNDYTTALHMMRTG-AVGIIVGG 240 (393)
T ss_dssp HHHCSSCEEEECCCSHHHHHHHHTTT-CSEEEESC
T ss_pred HHhcCCCEEECCcCCHHHHHHHHHcC-CCEEEECC
Confidence 99999999984445999999999988 99999987
No 276
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.65 E-value=0.016 Score=52.69 Aligned_cols=131 Identities=11% Similarity=0.148 Sum_probs=77.4
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..++++|+|+|-| +| +.+|.+ + + -+.+.++..++. |- .+.+-++..
T Consensus 76 ~~~~~~Gad~Vll--~~-----------ser~l~-~----~----e~~~~~~~a~~~-Gl-~~iv~v~~~---------- 121 (219)
T 2h6r_A 76 EAIKDCGCKGTLI--NH-----------SEKRML-L----A----DIEAVINKCKNL-GL-ETIVCTNNI---------- 121 (219)
T ss_dssp HHHHHHTCCEEEE--SB-----------TTBCCB-H----H----HHHHHHHHHHHH-TC-EEEEEESSS----------
T ss_pred HHHHHcCCCEEEE--CC-----------ccccCC-H----H----HHHHHHHHHHHC-CC-eEEEEeCCc----------
Confidence 6778999999998 33 112221 0 1 145666666554 43 233333431
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCc-c-----cccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRM-K-----TREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~-~-----~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
.+ .+.+.+.|.+++-+..... + ............+.+|+.. ++||++.||+ ++++++.+.+.| +|
T Consensus 122 -~e-----~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~g-aD 194 (219)
T 2h6r_A 122 -NT-----SKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLG-AE 194 (219)
T ss_dssp -HH-----HHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTT-CC
T ss_pred -hH-----HHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCC-CC
Confidence 11 1234455777777644321 1 1111111223455566655 6899999999 688888887776 99
Q ss_pred EEEechHHhhCCcHHHHHHh
Q 015862 342 LVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~ 361 (399)
.|.+|.+++.-+|+...+++
T Consensus 195 gvlVGsAi~~~~d~~~~~~~ 214 (219)
T 2h6r_A 195 GVLLASGVVKAKNVEEAIRE 214 (219)
T ss_dssp CEEESHHHHTCSSHHHHHHH
T ss_pred EEEEcHHHhCcccHHHHHHH
Confidence 99999999998888766653
No 277
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=96.59 E-value=0.0021 Score=61.14 Aligned_cols=49 Identities=18% Similarity=0.107 Sum_probs=42.4
Q ss_pred CchhhHHHHhhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhhCCc
Q 015862 305 CPHSLLPMRKAFKGTFL--VAGGY-DREDGNKAIAEGRADLVVYGRLFLANPD 354 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadPd 354 (399)
.++.++.+++.+++|++ +.||+ |++++.++++.| +|.|.+|++++..++
T Consensus 195 ~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aG-adgvvvGsai~~~~d 246 (297)
T 2zbt_A 195 PFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLG-MDGVFVGSGIFKSGD 246 (297)
T ss_dssp CHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTT-CSEEEECGGGGGSSC
T ss_pred hHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcC-CCEEEEchHHhCCCC
Confidence 45667888888889987 99999 999999999998 999999999995443
No 278
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.51 E-value=0.004 Score=59.06 Aligned_cols=109 Identities=18% Similarity=0.167 Sum_probs=67.5
Q ss_pred ccCCCCCCCCc--hhhhhHH---HHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEE
Q 015862 218 VNDRTDQYGGS--LENRCRF---ALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHM 291 (399)
Q Consensus 218 ~N~R~D~yGGs--lenR~r~---~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v 291 (399)
.|+|.+-|-+- .+|-..+ +.+.++++|+..|.. +|.|-+. +.+++.+ ..+.|+|+|-+
T Consensus 156 ~nHR~gL~d~vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~------------tleea~e----A~~aGaD~I~L 219 (285)
T 1o4u_A 156 DPHRLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVE------------NLEDALR----AVEAGADIVML 219 (285)
T ss_dssp C--------CEEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEES------------SHHHHHH----HHHTTCSEEEE
T ss_pred CCccCCCcccEEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeC------------CHHHHHH----HHHcCCCEEEE
Confidence 36776555542 3566655 477888899888764 6776432 2344333 34579999887
Q ss_pred eCCCcccccccCCCchhhHHHHhhc-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 292 VEPRMKTREEKSECPHSLLPMRKAF-----KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
..- ..+.++.+.+.+ .+++.++||+|++.+.++.+.| +|+|++|.....-|
T Consensus 220 Dn~----------~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tG-VD~IsvGslt~sa~ 275 (285)
T 1o4u_A 220 DNL----------SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFET-VDVISSSRLTLQEV 275 (285)
T ss_dssp ESC----------CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTT-CCEEEEGGGTSSCC
T ss_pred CCC----------CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 642 122333333332 5789999999999999999998 99999999665444
No 279
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=96.50 E-value=0.0094 Score=59.57 Aligned_cols=101 Identities=8% Similarity=0.107 Sum_probs=71.2
Q ss_pred HHHHH-HHHHHHhC--CC-ceEEEecCCcccCCCCC-----CChHHHHHHHHHh-hhhhCceEEEEeCCCcccccccCCC
Q 015862 236 ALEIV-EAVSNEIG--AD-RVGIRLSPFANYMESGD-----SNPEALGLYMAES-LNKYGILYCHMVEPRMKTREEKSEC 305 (399)
Q Consensus 236 ~~eii-~avR~~vg--~~-~v~vrls~~~~~~~~~~-----~~~~~~~~~l~~~-Le~~Gvd~l~v~~~~~~~~~~~~~~ 305 (399)
.+++| ++||++ | ++ .|.+..+..+.+....+ ..+.++++++.+. ++++++.||+ +|. ....
T Consensus 220 ~l~~i~~Air~a-Gy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i~~IE--dPl------~~dD 290 (417)
T 3qn3_A 220 PIDLLMTCIKKA-GYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIE--DGL------AEND 290 (417)
T ss_dssp HHHHHHHHHHHT-TCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEE--SSS------CTTC
T ss_pred HHHHHHHHHHHc-CCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcceeEEe--cCC------Cccc
Confidence 46666 899998 8 66 57777776433322111 1246778888876 8999988877 442 2235
Q ss_pred chhhHHHHhhc--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEEe
Q 015862 306 PHSLLPMRKAF--KGTFLVAGGY-D-REDGNKAIAEGRADLVVY 345 (399)
Q Consensus 306 ~~~~~~ir~~~--~~pvi~~Ggi-t-~~~a~~~L~~G~~D~V~~ 345 (399)
++..+.+++.+ ++||++...+ | ++++.++|+.+.||.|-+
T Consensus 291 ~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 334 (417)
T 3qn3_A 291 FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLI 334 (417)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEe
Confidence 66778899888 4787766666 7 999999999999998865
No 280
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.49 E-value=0.0045 Score=55.82 Aligned_cols=69 Identities=14% Similarity=0.035 Sum_probs=51.1
Q ss_pred hCceEEEEeCCCcccc---c-ccCCCchhhHHHHhh--cCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCCc
Q 015862 284 YGILYCHMVEPRMKTR---E-EKSECPHSLLPMRKA--FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPD 354 (399)
Q Consensus 284 ~Gvd~l~v~~~~~~~~---~-~~~~~~~~~~~ir~~--~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPd 354 (399)
.|+||+-++. .+... . .....+..++.+++. .++||++.||++++.+.++++.| ++.|++++++...+|
T Consensus 106 ~GaDyv~~g~-vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~G-a~gVav~s~i~~~~d 180 (210)
T 3ceu_A 106 HFYDYVFMSP-IYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFG-FGGAVVLGDLWNKFD 180 (210)
T ss_dssp GGSSEEEECC-CC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTT-CSEEEESHHHHTTCC
T ss_pred hCCCEEEECC-cCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhC-CCEEEEhHHhHcCCC
Confidence 7999998742 22111 1 112245667777777 58999999999999999999988 999999999987544
No 281
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.49 E-value=0.037 Score=51.06 Aligned_cols=138 Identities=9% Similarity=0.098 Sum_probs=86.1
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC--ceEEEecCCccc-
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD--RVGIRLSPFANY- 262 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~--~v~vrls~~~~~- 262 (399)
.+.++...++|+|-|-|+..- . +. .++++++-+..|.. .+++......++
T Consensus 87 ~e~~~~~l~~GadkVii~t~a----------~-------------~~----p~li~e~~~~~g~q~iv~~iD~~~~~~~~ 139 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMA----------I-------------KD----ATLCLEILKEFGSEAIVLALDTILKEDYV 139 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTT----------T-------------TC----HHHHHHHHHHHCTTTEEEEEEEEESSSEE
T ss_pred HHHHHHHHHcCCCEEEEcccc----------c-------------cC----CchHHHHHhcccCceEEEEEEEEeCCCCE
Confidence 567788889999999988543 0 11 34455556667766 245543211111
Q ss_pred -CCCCCCC-hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcC
Q 015862 263 -MESGDSN-PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEG 338 (399)
Q Consensus 263 -~~~~~~~-~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G 338 (399)
...+|.. +.-+..++++.+++.|+..+-++.-....+ ...++.+.++.+++.+ ++||+++||+ +.++.+++ +.+
T Consensus 140 v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt-~~G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~ 217 (243)
T 4gj1_A 140 VAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGT-MQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENL-KGI 217 (243)
T ss_dssp EC--------CCBHHHHHHHHHTTTCCEEEEEETTC------CCCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-TTT
T ss_pred EEecCceecccchHHHHHHHHhhcCCcEEEeeeeccccc-ccCCCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-Hcc
Confidence 1111111 112246688888999988776543221111 2234667889999987 5899999999 89998875 555
Q ss_pred CCcEEEechHHhhCC
Q 015862 339 RADLVVYGRLFLANP 353 (399)
Q Consensus 339 ~~D~V~~gR~~iadP 353 (399)
++.|.+|++|...-
T Consensus 218 -~~gvivg~Al~~g~ 231 (243)
T 4gj1_A 218 -CSGVIVGKALLDGV 231 (243)
T ss_dssp -CSEEEECHHHHTTS
T ss_pred -CchhehHHHHHCCC
Confidence 99999999987654
No 282
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.0014 Score=61.37 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=64.1
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++.+++.|++.+|+..-.. .+.+.++.+.+.+++||...||+ +. +++++| .| +|-|.+|..++.|
T Consensus 40 p~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~G-a~~Viigs~a~~~ 109 (260)
T 2agk_A 40 SSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KW-ASKVIVTSWLFTK 109 (260)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TT-CSCEEECGGGBCT
T ss_pred HHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cC-CCEEEECcHHHhh
Confidence 35578888889999888742210 35677888999999999999999 55 999999 77 9999999999999
Q ss_pred -----CcHHHHHHh
Q 015862 353 -----PDLPRRFEL 361 (399)
Q Consensus 353 -----Pdl~~k~~~ 361 (399)
|++++++.+
T Consensus 110 ~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 110 EGHFQLKRLERLTE 123 (260)
T ss_dssp TCCBCHHHHHHHHH
T ss_pred cCCCCHHHHHHHHH
Confidence 999988865
No 283
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.43 E-value=0.071 Score=50.81 Aligned_cols=72 Identities=11% Similarity=0.023 Sum_probs=52.5
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHH-----------HHHHHHHcCC
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGR 339 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~-----------~a~~~L~~G~ 339 (399)
+....+++...+.|++.+-++. .-++.||+.++ ..+++++|+.++ +..++++.|
T Consensus 158 e~V~~lA~~a~~~G~dGvV~s~-------------~E~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aG- 223 (303)
T 3ru6_A 158 EAVINFSKISYENGLDGMVCSV-------------FESKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENL- 223 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEECCT-------------TTHHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCEEEECH-------------HHHHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcC-
Confidence 4456678777888998866421 12567888886 457778888443 467888888
Q ss_pred CcEEEechHHhhCCcHHH
Q 015862 340 ADLVVYGRLFLANPDLPR 357 (399)
Q Consensus 340 ~D~V~~gR~~iadPdl~~ 357 (399)
+|++.+||+++..+|..+
T Consensus 224 Ad~iVvGr~I~~a~dp~~ 241 (303)
T 3ru6_A 224 SDYIVVGRPIYKNENPRA 241 (303)
T ss_dssp CSEEEECHHHHTSSCHHH
T ss_pred CCEEEEChHHhCCCCHHH
Confidence 999999999998776543
No 284
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=96.39 E-value=0.023 Score=52.48 Aligned_cols=50 Identities=22% Similarity=0.358 Sum_probs=40.9
Q ss_pred hHHHHhhcC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 309 LLPMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 309 ~~~ir~~~~-~pvi~~Ggit~~-----------~a~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
++.+|+..+ .++++.||++++ ...++++.| +|++.+||+++..+|..+.+
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 234 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAG-VDYMVIGRPVTQSVDPAQTL 234 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTT-CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcC-CCEEEECHHHcCCCCHHHHH
Confidence 667887775 678999999777 788899998 99999999999987754443
No 285
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.38 E-value=0.061 Score=49.95 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=85.7
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..++.+|+|+|-|.++. |+ + .-+.++++.+++. |- .+.|-++.
T Consensus 117 ~ea~~~GAD~ilLi~a~-------l~-------~----------~~l~~l~~~a~~l-Gl-~~lvEv~~----------- 159 (251)
T 1i4n_A 117 KLASSVGADAILIIARI-------LT-------A----------EQIKEIYEAAEEL-GM-DSLVEVHS----------- 159 (251)
T ss_dssp HHHHHTTCSEEEEEGGG-------SC-------H----------HHHHHHHHHHHTT-TC-EEEEEECS-----------
T ss_pred HHHHHcCCCEEEEeccc-------CC-------H----------HHHHHHHHHHHHc-CC-eEEEEeCC-----------
Confidence 34889999999988763 11 1 2456777777763 42 45555542
Q ss_pred hHHHHHHHHHhhhhh-CceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 270 PEALGLYMAESLNKY-GILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~-Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.++ ++...+. |.++|-+..+..... .........+.+.+ ++++|+-||| |++++..+.+. +|.|.+
T Consensus 160 -~eE----~~~A~~l~g~~iIGinnr~l~t~---~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avLV 229 (251)
T 1i4n_A 160 -RED----LEKVFSVIRPKIIGINTRDLDTF---EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK--VNAVLV 229 (251)
T ss_dssp -HHH----HHHHHTTCCCSEEEEECBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT--CSEEEE
T ss_pred -HHH----HHHHHhcCCCCEEEEeCcccccC---CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEE
Confidence 233 2233456 899998876644321 12344555666666 3679999999 89999999877 999999
Q ss_pred chHHhhCCcHHHHHHh
Q 015862 346 GRLFLANPDLPRRFEL 361 (399)
Q Consensus 346 gR~~iadPdl~~k~~~ 361 (399)
|.+++..+|....+++
T Consensus 230 G~aimr~~d~~~~~~~ 245 (251)
T 1i4n_A 230 GTSIMKAENPRRFLEE 245 (251)
T ss_dssp CHHHHHCSSHHHHHHH
T ss_pred cHHHcCCcCHHHHHHH
Confidence 9999999988776653
No 286
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.38 E-value=0.016 Score=59.06 Aligned_cols=123 Identities=17% Similarity=0.083 Sum_probs=78.0
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
+.+....++|.|.+-+..++|+. .-.++.++.+|+..+ -+|.++=-.
T Consensus 231 ~~a~~l~~~gvd~lvvdta~G~~------------------------~~~L~~I~~l~~~~~-vpvi~k~v~-------- 277 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDTAHAHN------------------------LKAIKSMKEMRQKVD-ADFIVGNIA-------- 277 (486)
T ss_dssp HHHHHHHHTTCSEEEEECSCCCC------------------------HHHHHHHHHHHHTCC-SEEEEEEEC--------
T ss_pred HHHHHHHHhcCCceEEEecCCcE------------------------eehhhHHHHHHHHhC-CccccCCcC--------
Confidence 55677888999998877655421 123566788888772 355432111
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCccccc------ccCCC---chhhHHHHhhcCCcEEEeCCC-CHHHHHHHHH
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE------EKSEC---PHSLLPMRKAFKGTFLVAGGY-DREDGNKAIA 336 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~------~~~~~---~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 336 (399)
+.+ -++.|. |+|.+.+..+.-+... ...+. ...+..+.+.+++|||+.||+ +..++.++|.
T Consensus 278 ---~~~----~a~~l~--G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kala 348 (486)
T 2cu0_A 278 ---NPK----AVDDLT--FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIA 348 (486)
T ss_dssp ---CHH----HHTTCT--TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHH
T ss_pred ---CHH----HHHHhh--CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHH
Confidence 122 234454 9999987222100000 01111 122345566678999999999 9999999999
Q ss_pred cCCCcEEEechHHhhC
Q 015862 337 EGRADLVVYGRLFLAN 352 (399)
Q Consensus 337 ~G~~D~V~~gR~~iad 352 (399)
-| ||.|++|++++.-
T Consensus 349 lG-A~~v~~g~~~~~~ 363 (486)
T 2cu0_A 349 AG-ADAVMLGNLLAGT 363 (486)
T ss_dssp TT-CSEEEESTTTTTB
T ss_pred cC-CCceeeChhhhcC
Confidence 88 9999999999863
No 287
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.37 E-value=0.0067 Score=57.81 Aligned_cols=108 Identities=12% Similarity=0.096 Sum_probs=59.7
Q ss_pred cCCCCCCCCc--hhhhhHH---HHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 219 NDRTDQYGGS--LENRCRF---ALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 219 N~R~D~yGGs--lenR~r~---~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
|||.+.+..- ..|...+ ..+-++++|+..+.. .|.+-+. +.++..+.+ +.|+|+|-++
T Consensus 163 ~hr~~l~d~vlik~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A~----~aGaD~I~ld 226 (294)
T 3c2e_A 163 THRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECL------------SEDEATEAI----EAGADVIMLD 226 (294)
T ss_dssp CCCCSTTTSEEECHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECS------------SSHHHHHHH----HHTCSEEECC
T ss_pred ceecCccceEEeecchhhhcCCHHHHHHHHHHhcCcCCeEEEecC------------CHHHHHHHH----HcCCCEEEEC
Confidence 5565555542 2444555 577889999999853 4555222 123332222 4699999864
Q ss_pred CCCcccccccCCCchhhHHHHhhc--------CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF--------KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~--------~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.. + ++.++.+++.+ .+++.++||+|++.+.++++.| +|+|++|.....-|
T Consensus 227 ~~--~--------~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~G-vD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 227 NF--K--------GDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDD-IDIYSTSSIHQGTP 284 (294)
T ss_dssp C-------------------------------CCEEEEECCCCC------CCCS-CSEEECGGGTSSCC
T ss_pred CC--C--------HHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcC-CCEEEEechhcCCC
Confidence 32 1 12233333333 2789999999999999999998 89999999865444
No 288
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.37 E-value=0.12 Score=47.31 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=73.9
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce-EEEecCCcccCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV-GIRLSPFANYMESGDS 268 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v-~vrls~~~~~~~~~~~ 268 (399)
..+.+.|.|.|++|+.. ..+.++.+|+..+-..+ .+|+.... .
T Consensus 86 ~~i~~~~ld~vQLHG~E-----------------------------~~~~~~~l~~~~~~~viKa~~v~~~~-------~ 129 (228)
T 4aaj_A 86 MAIERTGAQYIQVHSNA-----------------------------LPQTIDTLKKEFGVFVMKAFRVPTIS-------K 129 (228)
T ss_dssp HHHHHHTCSEEEECSCC-----------------------------CHHHHHHHHHHHCCEEEEEEECCSSC-------S
T ss_pred HHHHhccchheeccccc-----------------------------CHHHHHHHhhccCceEEEEEEecccc-------c
Confidence 34566899999999543 14567788888764322 45664321 2
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechH
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 348 (399)
.+.++...+...+....+|++-+..+ +. ......|..++.+.. +.|++..||++|+...++|+.-....|=+..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~d~~LlDs~--GG-tG~~fDW~~~~~~~~--~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSG 204 (228)
T 4aaj_A 130 NPEEDANRLLSEISRYNADMVLLDTG--AG-SGKLHDLRVSSLVAR--KIPVIVAGGLNAENVEEVIKVVKPYGVDVSSG 204 (228)
T ss_dssp CHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH--HSCEEEESSCCTTTHHHHHHHHCCSEEEESGG
T ss_pred chhhhHHHHHHHHhccCCCEEccCCC--CC-CcCcCChHHHHHhhh--cCCeEEECCCCHHHHHHHHHHhCCCEEEeCCC
Confidence 34445555566666667888766542 11 122235666665544 46899999999999998888544667766665
Q ss_pred H
Q 015862 349 F 349 (399)
Q Consensus 349 ~ 349 (399)
.
T Consensus 205 V 205 (228)
T 4aaj_A 205 V 205 (228)
T ss_dssp G
T ss_pred C
Confidence 4
No 289
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.36 E-value=0.0062 Score=54.26 Aligned_cols=67 Identities=18% Similarity=0.116 Sum_probs=54.4
Q ss_pred HHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 277 MAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 277 l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
-.+.+.....|++++-.+ ..+..++++++.+++|+|++|.+ |.++++++|+.| +|.|+.+...+.+-
T Consensus 119 ~~~~i~~~~PD~iEiLPG---------i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aG-A~aVsTs~~~LW~~ 186 (192)
T 3kts_A 119 GVALIQKVQPDCIELLPG---------IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASG-AIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHHCCSEEEEECT---------TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTT-EEEEEECCGGGGTT
T ss_pred HHHHHhhcCCCEEEECCc---------hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CeEEEeCCHHHhCc
Confidence 445556667889887532 13468899999999999999999 899999999999 99999998877653
No 290
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=96.33 E-value=0.059 Score=50.25 Aligned_cols=132 Identities=14% Similarity=0.128 Sum_probs=78.9
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh--CC-C--ceEE-EecCCc-
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI--GA-D--RVGI-RLSPFA- 260 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v--g~-~--~v~v-rls~~~- 260 (399)
+++.+.+.|+|.|-+|+..| ...+...+++.++.. |. . .+.| .++..+
T Consensus 75 a~~~~~~~gad~vTVh~~~G-------------------------~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~ 129 (259)
T 3tfx_A 75 GAKALAKLGITFTTVHALGG-------------------------SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISD 129 (259)
T ss_dssp HHHHHHTTTCSEEEEEGGGC-------------------------HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCH
T ss_pred HHHHHHhcCCCEEEEcCCCC-------------------------HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCH
Confidence 44556789999999997654 122333444444321 21 2 2344 344322
Q ss_pred -cc-CCCCCC-ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHH-------
Q 015862 261 -NY-MESGDS-NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDRE------- 329 (399)
Q Consensus 261 -~~-~~~~~~-~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~------- 329 (399)
++ .+.+.. ...+....+++...++|+|-+-++ ..-++.||+.++ ..++.+.||.+.
T Consensus 130 ~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s-------------~~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ 196 (259)
T 3tfx_A 130 DVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICS-------------PLEVKKLHENIGDDFLYVTPGIRPAGNAKDDQ 196 (259)
T ss_dssp HHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECC-------------GGGHHHHHHHHCSSSEEEECCCCCC-------
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEEC-------------HHHHHHHHhhcCCccEEEcCCcCCCCCCcCCc
Confidence 12 112112 233456677887788898876542 124567888875 346677777322
Q ss_pred ----HHHHHHHcCCCcEEEechHHhhCCcHHHH
Q 015862 330 ----DGNKAIAEGRADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 330 ----~a~~~L~~G~~D~V~~gR~~iadPdl~~k 358 (399)
+..++++.| +|++.+||+++..+|-...
T Consensus 197 ~Rv~T~~~a~~aG-ad~iVvGr~I~~a~dp~~a 228 (259)
T 3tfx_A 197 SRVATPKMAKEWG-SSAIVVGRPITLASDPKAA 228 (259)
T ss_dssp ----CHHHHHHTT-CSEEEECHHHHTSSSHHHH
T ss_pred cccCCHHHHHHcC-CCEEEEChHHhCCCCHHHH
Confidence 266788888 9999999999987765443
No 291
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=96.25 E-value=0.0082 Score=58.00 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=75.8
Q ss_pred HHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCC
Q 015862 191 NAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 191 ~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~ 269 (399)
.+++.||..++|+.+. + .+--.+.|++||+ ++ .|.|..|. ..
T Consensus 118 ~~~~~G~~~~KiKvg~---------------------~----~~~d~~~v~avr~---~~~~l~vDaN~---------~~ 160 (330)
T 3caw_A 118 GLKNEGYNTVKVKMGR---------------------D----LQKEADMLTHIAA---SGMRMRLDFNA---------LG 160 (330)
T ss_dssp HHHHHTCCEEEEECSS---------------------C----HHHHHHHHHHHHH---TTCEEEEECTT---------CS
T ss_pred HHHHcCCcEEEEecCC---------------------C----HHHHHHHHHHHhC---CCCeEEEECCC---------CC
Confidence 4456799999998642 1 2233788999998 33 45555443 33
Q ss_pred hHHHHHHHHHhhhh---hCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 270 PEALGLYMAESLNK---YGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 270 ~~~~~~~l~~~Le~---~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
+.++++++++.|++ .++.|++ +|.. .. .+....++ .+ +||++... +.+++.++++.+.+|+|-+
T Consensus 161 ~~~~A~~~~~~l~~~~~~~l~~iE--qP~~------~~-~d~~~~l~-~~-iPIa~dEs-~~~~~~~~i~~~a~d~v~~ 227 (330)
T 3caw_A 161 SWQTFEKFMVNLPLTVRPLIEYVE--DPFP------FD-FHAWGEAR-KL-AKIALDNQ-YDKVPWGKIASAPFDVIVI 227 (330)
T ss_dssp CHHHHHHHHHTSCTTTGGGEEEEE--CCSS------CC-HHHHHHHT-TT-SCEEESTT-GGGCCTTTCSSCSCSEEEE
T ss_pred CHHHHHHHHHHhhhhccCCceEEE--CCCC------CC-ccHHHHHH-hc-CcEEeCCC-CHHHHHHHHHcCCCCEEEe
Confidence 57889999999999 8999888 5521 11 02222277 78 99999888 9999999999999998876
No 292
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.23 E-value=0.0076 Score=55.07 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=53.6
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHH--HHHHHHHcCCCcEEEechHHhhC
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDRE--DGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~--~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..+++...++|+|.+-++.. ..+.++.||+.++..++.+.|+.++ +..++++.| +|++.+||+++.-
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~G-ad~iVVGR~I~~A 193 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAG-ADYEIIGRSIYNA 193 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHT-CSEEEECHHHHTS
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcC-CCEEEECHHhcCC
Confidence 56777778899987765321 2245677898887667778888544 466778888 9999999999987
Q ss_pred CcHHHH
Q 015862 353 PDLPRR 358 (399)
Q Consensus 353 Pdl~~k 358 (399)
+|-...
T Consensus 194 ~dP~~a 199 (222)
T 4dbe_A 194 GNPLTA 199 (222)
T ss_dssp SSHHHH
T ss_pred CCHHHH
Confidence 776443
No 293
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.22 E-value=0.04 Score=52.23 Aligned_cols=128 Identities=14% Similarity=0.069 Sum_probs=80.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
++.+.+.++++ ...+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+. |.-+|
T Consensus 18 iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~---gr~pv 72 (292)
T 2vc6_A 18 IDEVALHDLVE-------WQIEEGSFGLVPCGTTGE----SP-----------TLSKSEHEQVVEITIKTAN---GRVPV 72 (292)
T ss_dssp ECHHHHHHHHH-------HHHHTTCSEEETTSGGGT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSCB
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHHhC---CCCcE
Confidence 44444555444 446789999997766541 11 1245677655555554443 22256
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE------eCC-
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV------AGG- 325 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~Gg- 325 (399)
.+=++. .+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|.+++++||+. +|.
T Consensus 73 iaGvg~----------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~ 141 (292)
T 2vc6_A 73 IAGAGS----------NSTAEAIAFVRHAQNAGADGVLIVSPYYNKPT-QEGIYQHFKAIDAASTIPIIVYNIPGRSAIE 141 (292)
T ss_dssp EEECCC----------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSCC
T ss_pred EEecCC----------ccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCccccCcC
Confidence 553332 34677899999999999999988877654321 111233556788888999776 343
Q ss_pred CCHHHHHHHHH
Q 015862 326 YDREDGNKAIA 336 (399)
Q Consensus 326 it~~~a~~~L~ 336 (399)
++++...++.+
T Consensus 142 l~~~~~~~La~ 152 (292)
T 2vc6_A 142 IHVETLARIFE 152 (292)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 48998888876
No 294
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.18 E-value=0.36 Score=45.55 Aligned_cols=130 Identities=14% Similarity=0.133 Sum_probs=85.8
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec---CCcccC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS---PFANYM 263 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls---~~~~~~ 263 (399)
+..++|.++||+-|-|.+.+ =++|...+...++++..++. |- .|-.-|. ..++..
T Consensus 88 e~i~~ai~~GFtSVMiDgS~--------------------lp~eeNi~~Tk~vv~~ah~~-gv-sVEaElG~vgg~ed~~ 145 (286)
T 1gvf_A 88 DDIRRKVHAGVRSAMIDGSH--------------------FPFAENVKLVKSVVDFCHSQ-DC-SVEAELGRLGGVEDDM 145 (286)
T ss_dssp HHHHHHHHTTCCEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCC------
T ss_pred HHHHHHHHcCCCeEEECCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEEeeccCcccCc
Confidence 44567788999999999776 14688899999999999874 21 2333332 211111
Q ss_pred C-C---CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC--CchhhHHHHhhcCCcEEEeCC--CCHHHHHHHH
Q 015862 264 E-S---GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE--CPHSLLPMRKAFKGTFLVAGG--YDREDGNKAI 335 (399)
Q Consensus 264 ~-~---~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~--~~~~~~~ir~~~~~pvi~~Gg--it~~~a~~~L 335 (399)
. . ....+.+++.++++ +.|+|.|-+.-++....|...+ ..+.++.|++.+++|++.=|+ ++.++..+++
T Consensus 146 ~~~~~~~~~T~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai 222 (286)
T 1gvf_A 146 SVDAESAFLTDPQEAKRFVE---LTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTI 222 (286)
T ss_dssp -----CCSSCCHHHHHHHHH---HHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHH
T ss_pred ccccccccCCCHHHHHHHHH---HHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHH
Confidence 0 0 01234566666665 5799999998777544443333 345789999999999776664 5788899999
Q ss_pred HcCCCc
Q 015862 336 AEGRAD 341 (399)
Q Consensus 336 ~~G~~D 341 (399)
+.|.+-
T Consensus 223 ~~Gv~K 228 (286)
T 1gvf_A 223 ELGVTK 228 (286)
T ss_dssp HTTEEE
T ss_pred HCCCeE
Confidence 999443
No 295
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.15 E-value=0.061 Score=49.64 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=39.8
Q ss_pred hHHHHhhcC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 309 LLPMRKAFK-GTFLVAGGYDRE-----------DGNKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 309 ~~~ir~~~~-~pvi~~Ggit~~-----------~a~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
++.+|+..+ .++++.||+.++ ...++++.| +|++.+||+++..+|..+.+
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 228 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALG-SDYIVIGRSLTRAADPLRTY 228 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHT-CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcC-CCEEEECHhhcCCCCHHHHH
Confidence 667887775 568899999665 688899998 99999999999877754433
No 296
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=96.13 E-value=0.039 Score=55.55 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=70.3
Q ss_pred HHHHH-HHHHHH---hCCC-ceEEEecCCcccCC------CCC---CChHHHHHHHHHh-hhhhCceEEEEeCCCccccc
Q 015862 236 ALEIV-EAVSNE---IGAD-RVGIRLSPFANYME------SGD---SNPEALGLYMAES-LNKYGILYCHMVEPRMKTRE 300 (399)
Q Consensus 236 ~~eii-~avR~~---vg~~-~v~vrls~~~~~~~------~~~---~~~~~~~~~l~~~-Le~~Gvd~l~v~~~~~~~~~ 300 (399)
.+++| ++||++ +|++ .|.+..+..+.+.. ..+ ..+.++++++.+. |+++++.||+ +|.
T Consensus 242 ~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~i~~IE--dPl----- 314 (449)
T 3uj2_A 242 AIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPIVSIE--DGL----- 314 (449)
T ss_dssp HHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSCEEEEE--SCS-----
T ss_pred HHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcCceEEE--CCC-----
Confidence 34444 899999 8987 58888875322210 000 1256778888765 8999988877 552
Q ss_pred ccCCCchhhHHHHhhc--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEEe
Q 015862 301 EKSECPHSLLPMRKAF--KGTFLVAGGY-D-REDGNKAIAEGRADLVVY 345 (399)
Q Consensus 301 ~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t-~~~a~~~L~~G~~D~V~~ 345 (399)
....++..+.+++.+ ++|+++-..+ | ++++.++|+.+.||+|-+
T Consensus 315 -~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 362 (449)
T 3uj2_A 315 -DEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILI 362 (449)
T ss_dssp -CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred -CcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEE
Confidence 223566778899988 5666554455 4 999999999999998865
No 297
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.07 E-value=0.045 Score=51.74 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=71.3
Q ss_pred ccCCCCCCCCc--hhhhhHHH---HHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 218 VNDRTDQYGGS--LENRCRFA---LEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 218 ~N~R~D~yGGs--lenR~r~~---~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
.|+|.+-+.+- .+|-..+. .+.++++|+..+..+|.|-+. +.++ ++...++|+|++-++
T Consensus 158 ~nhR~gl~d~vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~------------t~ee----a~eal~aGaD~I~LD 221 (284)
T 1qpo_A 158 VNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVD------------SLEQ----LDAVLPEKPELILLD 221 (284)
T ss_dssp BCCCCSSSSSEEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEES------------SHHH----HHHHGGGCCSEEEEE
T ss_pred ccccccchhhhcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeC------------CHHH----HHHHHHcCCCEEEEC
Confidence 45666666553 33444443 678888888876445666442 1333 233345799998876
Q ss_pred CCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
..+. .......+.++... .+++.++||+|++.+.++.+.| +|+|++|.....-|
T Consensus 222 n~~~------~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tG-VD~isvG~l~~~a~ 276 (284)
T 1qpo_A 222 NFAV------WQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETG-VDYLAVGALTHSVR 276 (284)
T ss_dssp TCCH------HHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTT-CSEEECGGGTSSBC
T ss_pred CCCH------HHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcC-CCEEEECHHHcCCC
Confidence 4211 01112344444422 4689999999999999999999 99999999655444
No 298
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.06 E-value=0.21 Score=48.20 Aligned_cols=146 Identities=14% Similarity=0.094 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhh-hhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLEN-RCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslen-R~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
.+++|++.|+|+|.+|.-. +.|. .-.++. ..+++.+|.+++++. | -|+.+-+=++... ..
T Consensus 115 sve~a~~~GADAVk~lv~~--------------g~d~-~~e~~~~q~~~l~rv~~ec~~~-G-iPlllEil~y~~~--~~ 175 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYY--------------DVDG-DPQVNVQKQAYIERIGSECQAE-D-IPFFLEILTYDET--IS 175 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEE--------------CTTS-CHHHHHHHHHHHHHHHHHHHHH-T-CCEEEEEEECBTT--BS
T ss_pred CHHHHHHcCCCEEEEEEEc--------------CCCc-hHHHHHHHHHHHHHHHHHHHHc-C-CceEEEEeccCCC--CC
Confidence 4678899999999998533 2221 111222 345777777777664 2 2544433111110 00
Q ss_pred CCCh-------HHHHHHHHHhh--hhhCceEEEEeCCCccc---ccc--cC--CCch---hhHHHHhhcCCcEE-EeCCC
Q 015862 267 DSNP-------EALGLYMAESL--NKYGILYCHMVEPRMKT---REE--KS--ECPH---SLLPMRKAFKGTFL-VAGGY 326 (399)
Q Consensus 267 ~~~~-------~~~~~~l~~~L--e~~Gvd~l~v~~~~~~~---~~~--~~--~~~~---~~~~ir~~~~~pvi-~~Ggi 326 (399)
+..+ .+...+.++.+ .+.|+|++-+.-+.-.. .+. +. ...+ ..+++-++.++|+| .+||.
T Consensus 176 ~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~ 255 (332)
T 3iv3_A 176 NNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV 255 (332)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC
T ss_pred CCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 1111 33356778888 67799999875332110 000 00 0112 23344456789954 68888
Q ss_pred CHH----HHHHHHHcCCC--cEEEechHHhhCC
Q 015862 327 DRE----DGNKAIAEGRA--DLVVYGRLFLANP 353 (399)
Q Consensus 327 t~~----~a~~~L~~G~~--D~V~~gR~~iadP 353 (399)
+.+ ..+.+++.| + -.|.+||....+.
T Consensus 256 ~~~~fl~~v~~A~~aG-a~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 256 SAELFQETLVFAHKAG-AKFNGVLCGRATWAGS 287 (332)
T ss_dssp CHHHHHHHHHHHHHHT-CCCCEEEECHHHHTTH
T ss_pred CHHHHHHHHHHHHHcC-CCcceEEeeHHHHHhh
Confidence 644 445677788 6 8999999999884
No 299
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=96.05 E-value=0.032 Score=55.85 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=69.3
Q ss_pred HHHHHHHHHHh---CC--C-ceEEEecCCcccCCCCC-----CChHHHHHHHH-HhhhhhCceEEEEeCCCcccccccCC
Q 015862 237 LEIVEAVSNEI---GA--D-RVGIRLSPFANYMESGD-----SNPEALGLYMA-ESLNKYGILYCHMVEPRMKTREEKSE 304 (399)
Q Consensus 237 ~eii~avR~~v---g~--~-~v~vrls~~~~~~~~~~-----~~~~~~~~~l~-~~Le~~Gvd~l~v~~~~~~~~~~~~~ 304 (399)
.+.+++||+++ |+ + .|.|.....+.+....+ ..+.++++++. +.|+++++.||+ +|. ...
T Consensus 224 ~~~v~~vreav~~~G~~~~~~L~vDa~as~~~~n~~~~~~n~~~~~~~ai~~~~~~l~~~~i~~iE--eP~------~~~ 295 (427)
T 2pa6_A 224 REALDLLTESVKKAGYEDEVVFALDAAASEFYKDGYYYVEGKKLTREELLDYYKALVDEYPIVSIE--DPF------HEE 295 (427)
T ss_dssp HHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEE--CCS------CTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcchhccccCCceeecCCCCCHHHHHHHHHHHHhhCCCcEEE--cCC------Chh
Confidence 67788888888 86 5 46665532111100000 11456677774 588999998887 552 123
Q ss_pred CchhhHHHHhhcCCcEEEeCC-CC-HHHHHHHHHcCCCcEEEe
Q 015862 305 CPHSLLPMRKAFKGTFLVAGG-YD-REDGNKAIAEGRADLVVY 345 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi~~Gg-it-~~~a~~~L~~G~~D~V~~ 345 (399)
.++..+.+++..++||++... ++ ++++.++|+.+.+|+|-+
T Consensus 296 d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 296 DFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp CHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred hHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 456778899989999988777 45 999999999999999876
No 300
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.02 E-value=0.061 Score=51.33 Aligned_cols=131 Identities=15% Similarity=0.168 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+++..+++++.. .-+
T Consensus 32 ~iD~~~l~~lv~~l-------i~~Gv~gi~v~GttGE----~~-----------~Lt~~Er~~v~~~~~~~~~g---rvp 86 (304)
T 3l21_A 32 SLDTATAARLANHL-------VDQGCDGLVVSGTTGE----SP-----------TTTDGEKIELLRAVLEAVGD---RAR 86 (304)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCSEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHTT---TSE
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEeCccccc----hh-----------hCCHHHHHHHHHHHHHHhCC---CCe
Confidence 45556666665554 6689999998876641 11 12567776655555544432 226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|.+++++||+.- |.
T Consensus 87 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 155 (304)
T 3l21_A 87 VIAGAG----------TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPP-QRGLQAHFTAVADATELPMLLYDIPGRSAV 155 (304)
T ss_dssp EEEECC----------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHTSCSSCEEEEECHHHHSS
T ss_pred EEEeCC----------CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 655343 235678999999999999999998877654321 1112345667778889997643 32
Q ss_pred -CCHHHHHHHHHcC
Q 015862 326 -YDREDGNKAIAEG 338 (399)
Q Consensus 326 -it~~~a~~~L~~G 338 (399)
++++...++.+..
T Consensus 156 ~l~~~~~~~La~~p 169 (304)
T 3l21_A 156 PIEPDTIRALASHP 169 (304)
T ss_dssp CCCHHHHHHHHTST
T ss_pred CCCHHHHHHHhcCC
Confidence 4888888777433
No 301
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.01 E-value=0.057 Score=51.37 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHHh-CCC-ceEEEecCCc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNEI-GAD-RVGIRLSPFA 260 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~v-g~~-~v~vrls~~~ 260 (399)
+..+.+++.+++|+.||.|-..-+ .+|....+| .+-....++. -|++.|++. +++ .|.-|.-...
T Consensus 99 ~v~~~v~~l~~aGaagv~iEDq~~-----------~k~cGh~~gk~l~~~~e~~~-ri~Aa~~A~~~~~~~I~ARTDa~~ 166 (298)
T 3eoo_A 99 NIARTIRSFIKAGVGAVHLEDQVG-----------QKRCGHRPGKECVPAGEMVD-RIKAAVDARTDETFVIMARTDAAA 166 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCC-----------CCCTTCCCCCCBCCHHHHHH-HHHHHHHHCSSTTSEEEEEECTHH
T ss_pred HHHHHHHHHHHhCCeEEEECCCCC-----------CcccCCCCCCeecCHHHHHH-HHHHHHHhccCCCeEEEEeehhhh
Confidence 346667888899999999986542 244443333 3443333433 344444443 444 4677875421
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe---CCCCH-HHHHHHHH
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA---GGYDR-EDGNKAIA 336 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L~ 336 (399)
...++++++-++...++|+|.|-+... ...+.++.+.+++++||++| ++-|| -..+++-+
T Consensus 167 -------~~gldeai~Ra~ay~~AGAD~if~~~~---------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~ 230 (298)
T 3eoo_A 167 -------AEGIDAAIERAIAYVEAGADMIFPEAM---------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKG 230 (298)
T ss_dssp -------HHHHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHH
T ss_pred -------hcCHHHHHHHHHhhHhcCCCEEEeCCC---------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHH
Confidence 224778899999999999999886432 13467778888899998665 33232 22444445
Q ss_pred cCCCcEEEechHHh
Q 015862 337 EGRADLVVYGRLFL 350 (399)
Q Consensus 337 ~G~~D~V~~gR~~i 350 (399)
-| +.+|.++-.++
T Consensus 231 lG-v~~v~~~~~~~ 243 (298)
T 3eoo_A 231 AN-VDIALYCCGAY 243 (298)
T ss_dssp TT-CCEEEECSHHH
T ss_pred cC-CeEEEEchHHH
Confidence 56 99999986554
No 302
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=95.99 E-value=0.067 Score=49.76 Aligned_cols=142 Identities=15% Similarity=0.052 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEE
Q 015862 176 DEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGI 254 (399)
Q Consensus 176 ~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~v 254 (399)
.||-..+..|++++. .+.|+|.|-+|+..| .+.+++..+..+.. .|.+
T Consensus 86 ~DI~nTv~~~a~~~~--~~lg~d~vTvh~~~G-----------------------------~~~l~~~~~~~~~gv~vL~ 134 (255)
T 3qw3_A 86 GDIADTADAYATSAF--KHLNAHAITASPYMG-----------------------------SDSLQPFMRYPDKAVFVLC 134 (255)
T ss_dssp CCCHHHHHHHHHHHH--TTSCCSEEEECCTTC-----------------------------HHHHHHHHTCTTSEEEEEE
T ss_pred CCcHHHHHHHHHHHH--HHcCCCEEEEcccCC-----------------------------HHHHHHHHHhhCCceEEEE
Confidence 366667776665553 158999999996543 24444444443333 5777
Q ss_pred EecCCc--ccCCCC--CCChHHHHHHHHHh-hhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeC-CCC
Q 015862 255 RLSPFA--NYMESG--DSNPEALGLYMAES-LNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAG-GYD 327 (399)
Q Consensus 255 rls~~~--~~~~~~--~~~~~~~~~~l~~~-Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G-git 327 (399)
++|-.+ ++...+ +....+...++++. ..+.|++-+-++.. ..+-++.||+.++ .++++-| +..
T Consensus 135 ~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at----------~~~e~~~ir~~~~~~~~l~PGIg~q 204 (255)
T 3qw3_A 135 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGAT----------DPVALARVRARAPTLWFLVPGIGAQ 204 (255)
T ss_dssp ECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSS----------CHHHHHHHHHHCSSCCEEECCC---
T ss_pred eCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCC----------CHHHHHHHHHHCCCCeEEECCcCCC
Confidence 787532 222211 11123455566666 55678887765422 1235677888875 4454334 222
Q ss_pred HHHHHHHHHcCCCc------EEEechHHhhCCcHHHHH
Q 015862 328 REDGNKAIAEGRAD------LVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 328 ~~~a~~~L~~G~~D------~V~~gR~~iadPdl~~k~ 359 (399)
-.+.+++++.| +| ++.+||+++.-+|-.+.+
T Consensus 205 g~tp~~a~~~G-~d~~~~~~livvGR~I~~A~dp~~aa 241 (255)
T 3qw3_A 205 GGSLKASLDAG-LRADGSGMLINVSRGLARAADPRAAA 241 (255)
T ss_dssp --CHHHHHHHH-CCTTSCCEEEEESHHHHTSSCHHHHH
T ss_pred CCCHHHHHHcC-CCcccCeeEEEeChhhcCCCCHHHHH
Confidence 22344555565 66 599999999888754443
No 303
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.99 E-value=0.056 Score=49.66 Aligned_cols=51 Identities=18% Similarity=0.243 Sum_probs=39.5
Q ss_pred hhHHHHhhcC-CcEEEeCCCCHHHH-----------HHHHHcCCCcEEEechHHhhCCcHHHHH
Q 015862 308 SLLPMRKAFK-GTFLVAGGYDREDG-----------NKAIAEGRADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 308 ~~~~ir~~~~-~pvi~~Ggit~~~a-----------~~~L~~G~~D~V~~gR~~iadPdl~~k~ 359 (399)
-++.+|+..+ .++++.||+.++.+ .++++.| +|++.+||+++..||..+.+
T Consensus 165 ~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aG-ad~iVvGr~I~~a~dp~~a~ 227 (239)
T 1dbt_A 165 EAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKG-SSAIVVGRSITKAEDPVKAY 227 (239)
T ss_dssp GHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTT-CSEEEECHHHHTSSCHHHHH
T ss_pred HHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcC-CCEEEEChhhcCCCCHHHHH
Confidence 4456777664 56899999976666 7888888 99999999999877754433
No 304
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.98 E-value=0.21 Score=47.22 Aligned_cols=134 Identities=18% Similarity=0.159 Sum_probs=88.2
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec---CCcccC-
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS---PFANYM- 263 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls---~~~~~~- 263 (399)
.+++|.++||+-|-|.+.+ =++|...+...++++..++. |- .|-.-|. ..++..
T Consensus 95 ~i~~ai~~GFtSVMiDgS~--------------------~p~eeNi~~Tk~vv~~ah~~-gv-sVEaElG~vgG~Ed~~~ 152 (288)
T 3q94_A 95 KCKEAIDAGFTSVMIDASH--------------------HPFEENVETTKKVVEYAHAR-NV-SVEAELGTVGGQEDDVI 152 (288)
T ss_dssp HHHHHHHHTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESBCBCSCSSCG
T ss_pred HHHHHHHcCCCeEEEeCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCcC
Confidence 4567888999999999876 15788899999999988764 21 2333332 222111
Q ss_pred CC-CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC--CchhhHHHHhhcCCcEEEeCC--CCHHHHHHHHHcC
Q 015862 264 ES-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE--CPHSLLPMRKAFKGTFLVAGG--YDREDGNKAIAEG 338 (399)
Q Consensus 264 ~~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~--~~~~~~~ir~~~~~pvi~~Gg--it~~~a~~~L~~G 338 (399)
.. ....+.+++.++++ +.|+|.|-+.-++....|+..+ ..+.++.|++.+++|++.=|+ +..++..++++.|
T Consensus 153 ~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~G 229 (288)
T 3q94_A 153 AEGVIYADPAECKHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLG 229 (288)
T ss_dssp GGGCBCCCHHHHHHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTT
T ss_pred CccccCCCHHHHHHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcC
Confidence 00 01234566666654 6799999988776543443333 345688999999999776665 5788999999999
Q ss_pred CCcEEEech
Q 015862 339 RADLVVYGR 347 (399)
Q Consensus 339 ~~D~V~~gR 347 (399)
.+- |=++.
T Consensus 230 v~K-iNi~T 237 (288)
T 3q94_A 230 TSK-INVNT 237 (288)
T ss_dssp EEE-EEECH
T ss_pred CeE-EEECh
Confidence 443 43433
No 305
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.93 E-value=0.095 Score=49.53 Aligned_cols=126 Identities=13% Similarity=0.104 Sum_probs=79.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-c
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-R 251 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~ 251 (399)
++.+.+.++++ ...+.|.|||-+.+..|- |. -=|.+.|.+++..++++ ++.. +
T Consensus 18 iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~----~~gr~p 71 (289)
T 2yxg_A 18 VDFDGLEENIN-------FLIENGVSGIVAVGTTGE----SP-----------TLSHEEHKKVIEKVVDV----VNGRVQ 71 (289)
T ss_dssp ECHHHHHHHHH-------HHHHTTCSEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHH----HTTSSE
T ss_pred cCHHHHHHHHH-------HHHHCCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHH----hCCCCc
Confidence 44444544444 446799999998876541 11 12456776555555444 4333 5
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |.
T Consensus 72 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~ 140 (289)
T 2yxg_A 72 VIAGAG----------SNCTEEAIELSVFAEDVGADAVLSITPYYNKPT-QEGLRKHFGKVAESINLPIVLYNVPSRTAV 140 (289)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSC
T ss_pred EEEeCC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCc
Confidence 655343 235677999999999999999988877654321 111234556777888999664 3 32
Q ss_pred -CCHHHHHHHH
Q 015862 326 -YDREDGNKAI 335 (399)
Q Consensus 326 -it~~~a~~~L 335 (399)
++++...++.
T Consensus 141 ~l~~~~~~~La 151 (289)
T 2yxg_A 141 NLEPKTVKLLA 151 (289)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 4888888887
No 306
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=95.92 E-value=0.56 Score=44.64 Aligned_cols=130 Identities=14% Similarity=0.149 Sum_probs=83.4
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec---CCcccC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS---PFANYM 263 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls---~~~~~~ 263 (399)
+..++|.++||+-|-|.+.|- ++|...+...++++..++. |- .|-.-|. ..++..
T Consensus 88 e~~~~ai~~GFtSVMiDgS~~--------------------p~eeNi~~Tk~vv~~ah~~-gv-sVEaELG~igG~Ed~~ 145 (307)
T 3n9r_A 88 ESCEKAVKAGFTSVMIDASHH--------------------AFEENLELTSKVVKMAHNA-GV-SVEAELGRLMGIEDNI 145 (307)
T ss_dssp HHHHHHHHHTCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCCCC----
T ss_pred HHHHHHHHhCCCcEEEECCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCc
Confidence 344567889999999998771 5788899999999999874 21 2333232 222110
Q ss_pred CC----CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc--cCC--CchhhHHHHhhcCCcEEEeC-----------
Q 015862 264 ES----GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE--KSE--CPHSLLPMRKAFKGTFLVAG----------- 324 (399)
Q Consensus 264 ~~----~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~--~~~--~~~~~~~ir~~~~~pvi~~G----------- 324 (399)
.. ....+.+++.++++ +.|+|.|-+.-++....|. ..+ ..+.++.|++..++|++.=|
T Consensus 146 ~~~~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~ 222 (307)
T 3n9r_A 146 SVDEKDAVLVNPKEAEQFVK---ESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKS 222 (307)
T ss_dssp ------CCSCCHHHHHHHHH---HHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHH
T ss_pred ccccccccCCCHHHHHHHHH---HHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHH
Confidence 00 01234566666654 5799999998776543332 122 34567888887889976554
Q ss_pred ------------CCCHHHHHHHHHcCCCc
Q 015862 325 ------------GYDREDGNKAIAEGRAD 341 (399)
Q Consensus 325 ------------git~~~a~~~L~~G~~D 341 (399)
|++.++..++++.|.+-
T Consensus 223 ~~~~gg~~~~~~G~p~e~i~~ai~~GV~K 251 (307)
T 3n9r_A 223 YLDAGGDLKGSKGVPFEFLQESVKGGINK 251 (307)
T ss_dssp HHHTTCCCTTCBCCCHHHHHHHHHTTEEE
T ss_pred HHHhcCccCCCCCCCHHHHHHHHHcCceE
Confidence 55778889999988443
No 307
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.92 E-value=0.076 Score=47.74 Aligned_cols=122 Identities=15% Similarity=0.065 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce-EEEecCCcccC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV-GIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v-~vrls~~~~~~ 263 (399)
..+.|+.+.++|++++.+. + .+.+++||+.++- |+ ++......+ .
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~----------------------~----------~~~i~~i~~~~~~-pv~~~~~~~~~~-~ 70 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRAN----------------------T----------KEDILAIKETVDL-PVIGIVKRDYDH-S 70 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEE----------------------S----------HHHHHHHHHHCCS-CEEEECBCCCTT-C
T ss_pred HHHHHHHHHHCCCeeeccC----------------------C----------HHHHHHHHHhcCC-CEEeeeccCCCc-c
Confidence 4667778889999999752 0 3679999998843 44 332211100 0
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 343 (399)
+..-..+.+ .++.+.+.|+|+++++......+ .....+.++.+|+.++...+..+-.|++++.++.+.| +|+|
T Consensus 71 ~~~i~~~~~----~i~~~~~~Gad~v~l~~~~~~~p--~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G-~d~i 143 (223)
T 1y0e_A 71 DVFITATSK----EVDELIESQCEVIALDATLQQRP--KETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLG-FDYI 143 (223)
T ss_dssp CCCBSCSHH----HHHHHHHHTCSEEEEECSCSCCS--SSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT-CSEE
T ss_pred ccccCCcHH----HHHHHHhCCCCEEEEeeecccCc--ccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcC-CCEE
Confidence 010111222 23445678999999875422111 0112457788888874333344444899999988888 9999
Q ss_pred Eech
Q 015862 344 VYGR 347 (399)
Q Consensus 344 ~~gR 347 (399)
+++-
T Consensus 144 ~~~~ 147 (223)
T 1y0e_A 144 GTTL 147 (223)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 8753
No 308
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.92 E-value=0.79 Score=43.57 Aligned_cols=187 Identities=17% Similarity=0.140 Sum_probs=108.7
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCc-cCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRV-SNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVND 184 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~-~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~ 184 (399)
.+..+.+.+++.+.++++++|+.-.++. ........-....+.+.+|..- +..+ + -+
T Consensus 27 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~~VPVal-HlDH------g-----~~---------- 84 (305)
T 1rvg_A 27 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAV-HLDH------G-----SS---------- 84 (305)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEE-EEEE------E-----CS----------
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhCCCcEEE-ECCC------C-----CC----------
Confidence 4567888899999999999999743221 0000000000001112233210 0001 1 11
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec---CCcc
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS---PFAN 261 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls---~~~~ 261 (399)
.+..++|.++||+-|-|.+.| -++|...+...++++..++. |- .|-.-|. ..++
T Consensus 85 -~e~~~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed 141 (305)
T 1rvg_A 85 -YESVLRALRAGFTSVMIDKSH--------------------EDFETNVRETRRVVEAAHAV-GV-TVEAELGRLAGIEE 141 (305)
T ss_dssp -HHHHHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCCCSCC
T ss_pred -HHHHHHHHHcCCCeeeeCCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEEeeccCccC
Confidence 244567789999999999776 15788899999999999864 21 2333332 2121
Q ss_pred c-CC--C-CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc--cCC--CchhhHHHHhhcCCcEEEeC---------
Q 015862 262 Y-ME--S-GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE--KSE--CPHSLLPMRKAFKGTFLVAG--------- 324 (399)
Q Consensus 262 ~-~~--~-~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~--~~~--~~~~~~~ir~~~~~pvi~~G--------- 324 (399)
. .. . ....+.+++.++++ +.|+|.|-+.-++....+. ..+ ..+.++.|++.+++|++.=|
T Consensus 142 ~~~~~~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~ 218 (305)
T 1rvg_A 142 HVAVDEKDALLTNPEEARIFME---RTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELV 218 (305)
T ss_dssp ------CCTTCCCHHHHHHHHH---HHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHH
T ss_pred CccccccccccCCHHHHHHHHH---HHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHH
Confidence 1 00 0 01234666666664 4699999998776543333 223 34578899999999976544
Q ss_pred --------------CCCHHHHHHHHHcCCC
Q 015862 325 --------------GYDREDGNKAIAEGRA 340 (399)
Q Consensus 325 --------------git~~~a~~~L~~G~~ 340 (399)
|+..++..++++.|.+
T Consensus 219 ~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~ 248 (305)
T 1rvg_A 219 ERFRASGGEIGEAAGIHPEDIKKAISLGIA 248 (305)
T ss_dssp HHHHHTTCCCCSCBCCCHHHHHHHHHTTEE
T ss_pred HHHHhhccccccCCCCCHHHHHHHHHCCCe
Confidence 4467778888888843
No 309
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.85 E-value=0.086 Score=50.30 Aligned_cols=121 Identities=16% Similarity=0.141 Sum_probs=76.2
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+-+....+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+. |.-+|.+=++
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~~~~~~~---grvpViaGvg-------- 89 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVLGTTGE----SP-----------TVNEDEREKLVSRTLEIVD---GKIPVIVGAG-------- 89 (306)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGT----GG-----------GCCHHHHHHHHHHHHHHHT---TSSCEEEECC--------
T ss_pred HHHHHHHHHcCCCEEEeCccccc----hh-----------hCCHHHHHHHHHHHHHHhC---CCCeEEEcCC--------
Confidence 33334456789999998876641 11 1245677666555554443 2225655443
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----C-CCCHHHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----G-GYDREDGNKAI 335 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G-git~~~a~~~L 335 (399)
..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + | .++++...++.
T Consensus 90 --~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 90 --TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPT-QEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp --CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred --CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 235677899999999999999988877654321 111233556677778889664 2 3 24888888877
No 310
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.83 E-value=0.084 Score=50.32 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+. |.-+
T Consensus 28 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v~~~~~~~~~---grvp 82 (303)
T 2wkj_A 28 ALDKASLRRLVQFN-------IQQGIDGLYVGGSTGE----AF-----------VQSLSEREQVLEIVAEEAK---GKIK 82 (303)
T ss_dssp SBCHHHHHHHHHHH-------HHTTCSEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHT---TTSE
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECeeccC----hh-----------hCCHHHHHHHHHHHHHHhC---CCCc
Confidence 45555555555544 6789999998876541 11 1245677665555554433 2226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEE-e-----C
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLV-A-----G 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~-~-----G 324 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-++++ +||+. + |
T Consensus 83 ViaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~~lPiilYn~P~~tg 151 (303)
T 2wkj_A 83 LIAHVG----------CVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS-FEEHCDHYRAIIDSADGLPMVVYNIPALSG 151 (303)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHHTTCCEEEEECHHHHC
T ss_pred EEEecC----------CCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCC-HHHHHHHHHHHHHhCCCCCEEEEeCccccC
Confidence 665443 235677899999999999999988877654321 1112345566778888 99664 3 3
Q ss_pred C-CCHHHHHHHHHc
Q 015862 325 G-YDREDGNKAIAE 337 (399)
Q Consensus 325 g-it~~~a~~~L~~ 337 (399)
- ++++...++.+.
T Consensus 152 ~~l~~~~~~~La~~ 165 (303)
T 2wkj_A 152 VKLTLDQINTLVTL 165 (303)
T ss_dssp CCCCHHHHHHHHTS
T ss_pred CCCCHHHHHHHhcC
Confidence 2 488888887653
No 311
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.80 E-value=0.092 Score=49.98 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=81.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+. |.-+
T Consensus 29 ~iD~~~l~~lv~~-------li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~v~~~~~~~~~---grvp 83 (301)
T 1xky_A 29 NIDFAKTTKLVNY-------LIDNGTTAIVVGGTTGE----SP-----------TLTSEEKVALYRHVVSVVD---KRVP 83 (301)
T ss_dssp SBCHHHHHHHHHH-------HHHTTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSC
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHHhC---CCce
Confidence 3555555555554 46789999998876541 11 1245677665555554443 2225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |.
T Consensus 84 ViaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 152 (301)
T 1xky_A 84 VIAGTG----------SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPS-QEGMYQHFKAIAESTPLPVMLYNVPGRSIV 152 (301)
T ss_dssp EEEECC----------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHTCSSCEEEEECHHHHSS
T ss_pred EEeCCC----------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 655443 235677899999999999999988877654321 111234556677788899664 3 32
Q ss_pred -CCHHHHHHHHHc
Q 015862 326 -YDREDGNKAIAE 337 (399)
Q Consensus 326 -it~~~a~~~L~~ 337 (399)
++++...++.+.
T Consensus 153 ~l~~~~~~~La~~ 165 (301)
T 1xky_A 153 QISVDTVVRLSEI 165 (301)
T ss_dssp CCCHHHHHHHHTS
T ss_pred CCCHHHHHHHHcC
Confidence 488888877643
No 312
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.78 E-value=0.096 Score=50.22 Aligned_cols=129 Identities=12% Similarity=0.023 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=+.+.|.+++..+++++.. .-+
T Consensus 41 ~iD~~~l~~lv~~l-------i~~Gv~Gi~v~GtTGE----~~-----------~Ls~~Er~~v~~~~v~~~~g---rvp 95 (315)
T 3na8_A 41 GLDLPALGRSIERL-------IDGGVHAIAPLGSTGE----GA-----------YLSDPEWDEVVDFTLKTVAH---RVP 95 (315)
T ss_dssp SBCHHHHHHHHHHH-------HHTTCSEEECSSGGGT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHHhCC---CCc
Confidence 45556666666554 5699999998876641 11 12456776655555554432 225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeC-----C-
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAG-----G- 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g- 325 (399)
|.+=++ ..+.++++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.-. +
T Consensus 96 ViaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 164 (315)
T 3na8_A 96 TIVSVS----------DLTTAKTVRRAQFAESLGAEAVMVLPISYWKLN-EAEVFQHYRAVGEAIGVPVMLYNNPGTSGI 164 (315)
T ss_dssp BEEECC----------CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSC
T ss_pred EEEecC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCcEEEEeCcchhCc
Confidence 655333 235678999999999999999998777654321 11123456678888899966432 2
Q ss_pred -CCHHHHHHHHH
Q 015862 326 -YDREDGNKAIA 336 (399)
Q Consensus 326 -it~~~a~~~L~ 336 (399)
++++...++..
T Consensus 165 ~l~~~~~~~L~a 176 (315)
T 3na8_A 165 DMSVELILRIVR 176 (315)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 48888888734
No 313
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=95.73 E-value=0.17 Score=47.87 Aligned_cols=137 Identities=10% Similarity=0.029 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh-CCC-ceEEEecCCcc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-GAD-RVGIRLSPFAN 261 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v-g~~-~v~vrls~~~~ 261 (399)
+..+.+++..++|+.||.|-.+- ..+|.....|.+-.... ..+.|++++++- +.+ .|.-|.-. .
T Consensus 98 ~~~~~v~~l~~aGa~gv~iED~~-----------~pKrcgh~~gkl~~~~e-~~~~I~aa~~a~~~~~~~i~aRtda-a- 163 (287)
T 3b8i_A 98 NVMRTVVELERAGIAALTIEDTL-----------LPAQFGRKSTDLICVEE-GVGKIRAALEARVDPALTIIARTNA-E- 163 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBC-----------CSCCTTTCTTCBCCHHH-HHHHHHHHHHHCCSTTSEEEEEEET-T-
T ss_pred HHHHHHHHHHHhCCeEEEEcCCC-----------CccccCCCCCCccCHHH-HHHHHHHHHHcCCCCCcEEEEechh-h-
Confidence 34667777888999999998764 12343333333332323 345555555553 233 35556533 1
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe-CCCCHH-HHHHHHHcCC
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA-GGYDRE-DGNKAIAEGR 339 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggit~~-~a~~~L~~G~ 339 (399)
....+++++-++.++++|+|.|-+... +..+.++.|.+.+++|++.. ++-++. ..+++-+-|
T Consensus 164 ------~~gl~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~~lG- 227 (287)
T 3b8i_A 164 ------LIDVDAVIQRTLAYQEAGADGICLVGV---------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLG- 227 (287)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCSEEEEECC---------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHHHTT-
T ss_pred ------hcCHHHHHHHHHHHHHcCCCEEEecCC---------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHHHcC-
Confidence 224678899999999999998876422 23467888999999997744 332322 234455556
Q ss_pred CcEEEechHHh
Q 015862 340 ADLVVYGRLFL 350 (399)
Q Consensus 340 ~D~V~~gR~~i 350 (399)
+.+|.++-.++
T Consensus 228 v~~v~~~~~~~ 238 (287)
T 3b8i_A 228 VRVVVNGHAAY 238 (287)
T ss_dssp EEEEECCCHHH
T ss_pred CcEEEEChHHH
Confidence 88998865433
No 314
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.72 E-value=0.087 Score=50.06 Aligned_cols=151 Identities=14% Similarity=0.025 Sum_probs=89.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
++.+.+.++++ ...+.|.|||-+.+.-|- |. -=|.+.|.+++..+++++.. .-+|
T Consensus 18 iD~~~l~~lv~-------~li~~Gv~gi~v~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~g---rvpv 72 (297)
T 2rfg_A 18 VDEKALAGLVD-------WQIKHGAHGLVPVGTTGE----SP-----------TLTEEEHKRVVALVAEQAQG---RVPV 72 (297)
T ss_dssp ECHHHHHHHHH-------HHHHTTCSEEECSSGGGT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSCB
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccc----hh-----------hCCHHHHHHHHHHHHHHhCC---CCeE
Confidence 44444555544 446789999998766541 11 12456776655555544432 2255
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----CC-
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----GG- 325 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----Gg- 325 (399)
.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |.
T Consensus 73 iaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~ 141 (297)
T 2rfg_A 73 IAGAG----------SNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPS-QEGLYQHFKMVHDAIDIPIIVYNIPPRAVVD 141 (297)
T ss_dssp EEECC----------CSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSCC
T ss_pred EEccC----------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCCC
Confidence 55343 235677999999999999999988777554321 111234556777888999664 3 32
Q ss_pred CCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 326 YDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 326 it~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
++++...++.+.. -+|++ .-...|.....++++-
T Consensus 142 l~~~~~~~La~~p--nIvgi-Kds~gd~~~~~~~~~~ 175 (297)
T 2rfg_A 142 IKPETMARLAALP--RIVGV-KDATTDLARISRERML 175 (297)
T ss_dssp CCHHHHHHHHTST--TEEEE-EECSCCTTHHHHHHTT
T ss_pred CCHHHHHHHHcCC--CEEEE-EeCCCCHHHHHHHHHh
Confidence 4888888876433 24443 2222355556666643
No 315
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=95.72 E-value=0.21 Score=49.67 Aligned_cols=148 Identities=9% Similarity=0.007 Sum_probs=84.9
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHH--HHHHHHHHHHHhC---CCceEEEecCC--
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRF--ALEIVEAVSNEIG---ADRVGIRLSPF-- 259 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~--~~eii~avR~~vg---~~~v~vrls~~-- 259 (399)
+..+.|+++||+-|-|.+.|+ .| -.| -.++..... ..++++..++.+. ...|+.=....
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~----~~---~~~-------~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~ 173 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMS----CA---GDP-------IPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVP 173 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSC----CB---TCC-------SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSC
T ss_pred HHHHHHHHhCCCEEEECCCCC----CC---CCC-------CCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecC
Confidence 445667789999999888772 00 001 113333333 5777777776521 11232222211
Q ss_pred --ccc-CCCC--CCChHHHHHHHHH----hhhhhCceE-------EEEeCCCccccc-ccCCCchhhHHHHhhcCCc-EE
Q 015862 260 --ANY-MESG--DSNPEALGLYMAE----SLNKYGILY-------CHMVEPRMKTRE-EKSECPHSLLPMRKAFKGT-FL 321 (399)
Q Consensus 260 --~~~-~~~~--~~~~~~~~~~l~~----~Le~~Gvd~-------l~v~~~~~~~~~-~~~~~~~~~~~ir~~~~~p-vi 321 (399)
++. .+.. ...+.+++.++++ .|.+.|+|. |.+.-|+....+ ......+.++.|++.+++| ++
T Consensus 174 v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~P~LV 253 (420)
T 2fiq_A 174 VPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMV 253 (420)
T ss_dssp C----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTTSSCE
T ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCCCCEE
Confidence 010 0011 1245677888887 778899998 776666532222 1223456788999999989 66
Q ss_pred E---eCCC-CHHHHHHHHHcCCCcEEEechHH
Q 015862 322 V---AGGY-DREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 322 ~---~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
. +|.. +.++..++++.| +--|=+|-.+
T Consensus 254 le~HGgSg~~~e~l~~~v~~G-i~kiNV~t~l 284 (420)
T 2fiq_A 254 YEAHSTDYQTRTAYWELVRDH-FAILKVGPAL 284 (420)
T ss_dssp EEESCCTTCCHHHHHHHHHTT-EEEEEECHHH
T ss_pred EecCCCCCCCHHHHHHHHHcC-CCEEEECHHH
Confidence 5 3444 788889999998 5555555443
No 316
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.72 E-value=0.1 Score=49.46 Aligned_cols=126 Identities=10% Similarity=0.071 Sum_probs=79.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-c
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-R 251 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~ 251 (399)
++.+.+.++++ ...+.|.|||-+.+.-|- |. -=|.+.|.+++..+++. ++.. +
T Consensus 18 iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~----~~grvp 71 (294)
T 2ehh_A 18 VDYEALGNLIE-------FHVDNGTDAILVCGTTGE----SP-----------TLTFEEHEKVIEFAVKR----AAGRIK 71 (294)
T ss_dssp ECHHHHHHHHH-------HHHTTTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHH----HTTSSE
T ss_pred cCHHHHHHHHH-------HHHHCCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHH----hCCCCc
Confidence 44444555544 446789999998876541 11 12456676555555444 4333 5
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |.
T Consensus 72 viaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 140 (294)
T 2ehh_A 72 VIAGTG----------GNATHEAVHLTAHAKEVGADGALVVVPYYNKPT-QRGLYEHFKTVAQEVDIPIIIYNIPSRTCV 140 (294)
T ss_dssp EEEECC----------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHSC
T ss_pred EEEecC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCCcccCc
Confidence 655333 235677999999999999999988877654321 111234556777888999664 3 32
Q ss_pred -CCHHHHHHHH
Q 015862 326 -YDREDGNKAI 335 (399)
Q Consensus 326 -it~~~a~~~L 335 (399)
++++...++.
T Consensus 141 ~l~~~~~~~La 151 (294)
T 2ehh_A 141 EISVDTMFKLA 151 (294)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 4888888887
No 317
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.71 E-value=0.02 Score=52.02 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=64.1
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHH
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
.+++..+++.|.+.|+..++++-.+ +...+.++.+++.++..+++.|-+ |+++++.+++.| +|||.. |-
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AG-A~fivs--P~ 93 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTLRT-------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAG-AQFIVS--PG 93 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT-CSEEEE--SS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCC-------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcC-CCEEEe--CC
Confidence 4568899999999999999986432 123467888999998889999988 999999999999 998865 32
Q ss_pred hhCCcHHHHHHh
Q 015862 350 LANPDLPRRFEL 361 (399)
Q Consensus 350 iadPdl~~k~~~ 361 (399)
.+|++.+..++
T Consensus 94 -~~~evi~~~~~ 104 (217)
T 3lab_A 94 -LTPELIEKAKQ 104 (217)
T ss_dssp -CCHHHHHHHHH
T ss_pred -CcHHHHHHHHH
Confidence 57888776554
No 318
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.70 E-value=0.12 Score=49.92 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++..++ ++++..
T Consensus 51 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~~v----e~~~grv 104 (332)
T 2r8w_A 51 RVDIEAFSALIARL-------DAAEVDSVGILGSTGI----YM-----------YLTREERRRAIEAAA----TILRGRR 104 (332)
T ss_dssp CBCHHHHHHHHHHH-------HHHTCSEEEESSTTTT----GG-----------GSCHHHHHHHHHHHH----HHHTTSS
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHH----HHhCCCC
Confidence 35555555555544 6689999998876541 11 124566765555544 444333
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------C
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------G 324 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------G 324 (399)
+|.+=++. .+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.- |
T Consensus 105 pViaGvg~----------~st~eai~la~~A~~~Gadavlv~~P~Y~~~s-~~~l~~~f~~VA~a~~lPiilYn~P~~tg 173 (332)
T 2r8w_A 105 TLMAGIGA----------LRTDEAVALAKDAEAAGADALLLAPVSYTPLT-QEEAYHHFAAVAGATALPLAIYNNPTTTR 173 (332)
T ss_dssp EEEEEECC----------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCCC-HHHHHHHHHHHHHHCSSCEEEECCHHHHC
T ss_pred cEEEecCC----------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 66654443 35677999999999999999988777554321 1112345667778889997653 3
Q ss_pred -CCCHHHHHHHHHc
Q 015862 325 -GYDREDGNKAIAE 337 (399)
Q Consensus 325 -git~~~a~~~L~~ 337 (399)
.++++...++.+.
T Consensus 174 ~~l~~e~~~~La~~ 187 (332)
T 2r8w_A 174 FTFSDELLVRLAYI 187 (332)
T ss_dssp CCCCHHHHHHHHTS
T ss_pred cCCCHHHHHHHHcC
Confidence 2488888887653
No 319
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=95.66 E-value=0.45 Score=45.75 Aligned_cols=176 Identities=12% Similarity=0.094 Sum_probs=92.7
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDF 185 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f 185 (399)
++.+++++++++++|-++++.+.|+...+.|... ..|.+ . ..++.+++.+-+.+|
T Consensus 59 ~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q------~~p~~----------------W---~~~~~~~~~~~~~~y 113 (334)
T 1fob_A 59 LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQ------TTPSG----------------W---STTDLGTLKWQLYNY 113 (334)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBC------BCCTT----------------S---CSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccc------cCccc----------------c---ccCChHHHHHHHHHH
Confidence 5688999999999999999999775444433210 01100 0 013455666666665
Q ss_pred HHHH-HHHHHhC--CCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh-CCC-ceEEEecCCc
Q 015862 186 RLAA-RNAIEAG--FDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-GAD-RVGIRLSPFA 260 (399)
Q Consensus 186 ~~aA-~~a~~aG--fDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v-g~~-~v~vrls~~~ 260 (399)
.... .+.++.| .|.|. .++- +-.-+|.|.- ++ ...++..+++.+.+++||+.. |+. +|.+-+..
T Consensus 114 t~~v~~~l~~~g~~v~~v~--vGNE-~~~G~lwp~g--~~----~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~-- 182 (334)
T 1fob_A 114 TLEVCNTFAENDIDIEIIS--IGNE-IRAGLLWPLG--ET----SSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDD-- 182 (334)
T ss_dssp HHHHHHHHHHTTCCCSEEE--ESSS-GGGCSSBTTT--ST----TCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC--
T ss_pred HHHHHHHHHhCCCCCCEEE--Eeec-CcccccCCCC--cc----hhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCC--
Confidence 5444 3444555 45553 3342 1122333321 11 146888999999999999976 133 46554432
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhC------ceEEEEeCCCcccccccC-CCchhhHHHHhhcCCcEEEeC
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYG------ILYCHMVEPRMKTREEKS-ECPHSLLPMRKAFKGTFLVAG 324 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~G------vd~l~v~~~~~~~~~~~~-~~~~~~~~ir~~~~~pvi~~G 324 (399)
+ . ..+....+...+.+.| +|+|-++--.+....... .....++.+.+..+.||+.+.
T Consensus 183 -----~-~-~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~itE 246 (334)
T 1fob_A 183 -----G-W-SWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVE 246 (334)
T ss_dssp -----T-T-CHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred -----c-C-chHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 1 1 1223333434444444 688887632221100000 011234455566688977663
No 320
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.64 E-value=0.078 Score=50.23 Aligned_cols=152 Identities=10% Similarity=0.094 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++..+++++.. .-+
T Consensus 18 ~iD~~~l~~lv~~l-------i~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~g---r~p 72 (292)
T 2ojp_A 18 NVCRASLKKLIDYH-------VASGTSAIVSVGTTGE----SA-----------TLNHDEHADVVMMTLDLADG---RIP 72 (292)
T ss_dssp CBCHHHHHHHHHHH-------HHHTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccc----hh-----------hCCHHHHHHHHHHHHHHhCC---CCc
Confidence 45555566655554 6689999998876541 11 12456776655555544432 225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.- |.
T Consensus 73 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~ 141 (292)
T 2ojp_A 73 VIAGTG----------ANATAEAISLTQRFNDSGIVGCLTVTPYYNRPS-QEGLYQHFKAIAEHTDLPQILYNVPSRTGC 141 (292)
T ss_dssp EEEECC----------CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCC-HHHHHHHHHHHHTTCSSCEEEECCHHHHSC
T ss_pred EEEecC----------CccHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCcchhcc
Confidence 655333 335677999999999999999988777654321 1112345566777888997642 32
Q ss_pred -CCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 326 -YDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 326 -it~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
++++...++.+.. -+|++ .-...|.+-..++++-
T Consensus 142 ~l~~~~~~~La~~p--nivgi-K~s~gd~~~~~~~~~~ 176 (292)
T 2ojp_A 142 DLLPETVGRLAKVK--NIIGI-XEATGNLTRVNQIKEL 176 (292)
T ss_dssp CCCHHHHHHHHTST--TEEEC--CCSCCTHHHHHHHTT
T ss_pred CCCHHHHHHHHcCC--CEEEE-eCCCCCHHHHHHHHHh
Confidence 4888888876432 24443 2222344455556543
No 321
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.62 E-value=0.12 Score=50.25 Aligned_cols=128 Identities=15% Similarity=0.132 Sum_probs=80.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+.-|- |. -=|.+.|.+++..+++++. |.-+
T Consensus 48 ~ID~~~l~~lv~~-------li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~~ve~~~---grvp 102 (343)
T 2v9d_A 48 QLDKPGTAALIDD-------LIKAGVDGLFFLGSGGE----FS-----------QLGAEERKAIARFAIDHVD---RRVP 102 (343)
T ss_dssp SBCHHHHHHHHHH-------HHHTTCSCEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSC
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEeCccccC----hh-----------hCCHHHHHHHHHHHHHHhC---CCCc
Confidence 4555555555554 46689999998876541 11 1245677655555554433 2225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----C-
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----G- 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G- 324 (399)
|.+=++. .+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |
T Consensus 103 ViaGvg~----------~st~eai~la~~A~~~Gadavlv~~P~Y~~~s-~~~l~~~f~~VA~a~~lPiilYn~P~~tg~ 171 (343)
T 2v9d_A 103 VLIGTGG----------TNARETIELSQHAQQAGADGIVVINPYYWKVS-EANLIRYFEQVADSVTLPVMLYNFPALTGQ 171 (343)
T ss_dssp EEEECCS----------SCHHHHHHHHHHHHHHTCSEEEEECCSSSCCC-HHHHHHHHHHHHHTCSSCEEEEECHHHHSS
T ss_pred EEEecCC----------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCchhcCc
Confidence 6554432 35677999999999999999988877654321 111234556677888899664 2 3
Q ss_pred CCCHHHHHHHH
Q 015862 325 GYDREDGNKAI 335 (399)
Q Consensus 325 git~~~a~~~L 335 (399)
.++++...++.
T Consensus 172 ~l~~e~~~~La 182 (343)
T 2v9d_A 172 DLTPALVKTLA 182 (343)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 24888888877
No 322
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.59 E-value=0.13 Score=48.93 Aligned_cols=129 Identities=15% Similarity=0.097 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCC-C
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGA-D 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~-~ 250 (399)
.++.+.+.++++. ..+.|.|||-+.+..|- |. -=|.+.|.+++..++ ++++. .
T Consensus 24 ~iD~~~l~~lv~~-------li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v~~~~~----~~~~g~r 77 (301)
T 3m5v_A 24 KVDEQSYARLIKR-------QIENGIDAVVPVGTTGE----SA-----------TLTHEEHRTCIEIAV----ETCKGTK 77 (301)
T ss_dssp EECHHHHHHHHHH-------HHHTTCCEEECSSTTTT----GG-----------GSCHHHHHHHHHHHH----HHHTTSS
T ss_pred CCCHHHHHHHHHH-------HHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHH----HHhCCCC
Confidence 3455555555544 46799999998776541 11 124567765555544 44433 3
Q ss_pred -ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------
Q 015862 251 -RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------ 323 (399)
Q Consensus 251 -~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------ 323 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|.+++++||+.-
T Consensus 78 vpviaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~t 146 (301)
T 3m5v_A 78 VKVLAGAG----------SNATHEAVGLAKFAKEHGADGILSVAPYYNKPT-QQGLYEHYKAIAQSVDIPVLLYNVPGRT 146 (301)
T ss_dssp CEEEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred CeEEEeCC----------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCchhh
Confidence 5655333 335678999999999999999998877654321 1112345667888889997632
Q ss_pred CC-CCHHHHHHHHHc
Q 015862 324 GG-YDREDGNKAIAE 337 (399)
Q Consensus 324 Gg-it~~~a~~~L~~ 337 (399)
|. ++++...++.+.
T Consensus 147 g~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 147 GCEISTDTIIKLFRD 161 (301)
T ss_dssp SCCCCHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHhc
Confidence 32 489988888776
No 323
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.58 E-value=0.069 Score=51.22 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+++..+++.+.. .-+
T Consensus 40 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~~Er~~v~~~~v~~~~g---rvp 94 (314)
T 3qze_A 40 RLDWDSLAKLVDFH-------LQEGTNAIVAVGTTGE----SA-----------TLDVEEHIQVIRRVVDQVKG---RIP 94 (314)
T ss_dssp CBCHHHHHHHHHHH-------HHHTCCEEEESSGGGT----GG-----------GCCHHHHHHHHHHHHHHHTT---SSC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHHhCC---CCc
Confidence 45556666666554 6689999998876641 11 12567777666555555432 226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.- |.
T Consensus 95 ViaGvg----------~~st~eai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 163 (314)
T 3qze_A 95 VIAGTG----------ANSTREAVALTEAAKSGGADACLLVTPYYNKPT-QEGMYQHFRHIAEAVAIPQILYNVPGRTSC 163 (314)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHSCSCEEEEECHHHHSC
T ss_pred EEEeCC----------CcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 665333 335677999999999999999988877654321 1112345667778889996643 32
Q ss_pred -CCHHHHHHHHHc
Q 015862 326 -YDREDGNKAIAE 337 (399)
Q Consensus 326 -it~~~a~~~L~~ 337 (399)
++++...++.+.
T Consensus 164 ~l~~~~~~~La~~ 176 (314)
T 3qze_A 164 DMLPETVERLSKV 176 (314)
T ss_dssp CCCHHHHHHHHTS
T ss_pred CCCHHHHHHHhcC
Confidence 488888777643
No 324
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.57 E-value=0.13 Score=49.21 Aligned_cols=129 Identities=18% Similarity=0.100 Sum_probs=82.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+.. .-+
T Consensus 39 ~iD~~~l~~li~~-------li~~Gv~Gl~v~GtTGE----~~-----------~Ls~~Er~~v~~~~v~~~~g---rvp 93 (315)
T 3si9_A 39 AIDEKAFCNFVEW-------QITQGINGVSPVGTTGE----SP-----------TLTHEEHKRIIELCVEQVAK---RVP 93 (315)
T ss_dssp CBCHHHHHHHHHH-------HHHTTCSEEECSSTTTT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSC
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEeCccccC----cc-----------ccCHHHHHHHHHHHHHHhCC---CCc
Confidence 4555555555555 46799999997776541 11 12567777665555554432 225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ .++..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.- |.
T Consensus 94 ViaGvg----------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 162 (315)
T 3si9_A 94 VVAGAG----------SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPN-QRGLYTHFSSIAKAISIPIIIYNIPSRSVI 162 (315)
T ss_dssp BEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSC
T ss_pred EEEeCC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHcCCCCEEEEeCchhhCC
Confidence 665333 335678999999999999999988877654321 1112345667888889996643 32
Q ss_pred -CCHHHHHHHHH
Q 015862 326 -YDREDGNKAIA 336 (399)
Q Consensus 326 -it~~~a~~~L~ 336 (399)
++++...++.+
T Consensus 163 ~l~~~~~~~La~ 174 (315)
T 3si9_A 163 DMAVETMRDLCR 174 (315)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 48888888877
No 325
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.56 E-value=0.37 Score=44.25 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=49.9
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHHH-----------HHHHHHcC
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDRED-----------GNKAIAEG 338 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~-----------a~~~L~~G 338 (399)
.+...++++...+.|++-+-++. .-+..||+.++ ..++.+.|+.++. ..++++.|
T Consensus 143 ~~~v~~~A~~a~~~g~~GvV~s~-------------~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aG 209 (239)
T 3tr2_A 143 PDIVCRMATLAKSAGLDGVVCSA-------------QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAG 209 (239)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCH-------------HHHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEECc-------------hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcC
Confidence 34566778777788988766431 12345888775 3466777774322 56788888
Q ss_pred CCcEEEechHHhhCCcHHHH
Q 015862 339 RADLVVYGRLFLANPDLPRR 358 (399)
Q Consensus 339 ~~D~V~~gR~~iadPdl~~k 358 (399)
+|++.+||+++..+|....
T Consensus 210 -ad~lVvGr~I~~a~dp~~a 228 (239)
T 3tr2_A 210 -SDYLVIGRPITQSTDPLKA 228 (239)
T ss_dssp -CSEEEECHHHHTSSSHHHH
T ss_pred -CCEEEEChHHhCCCCHHHH
Confidence 9999999999987765443
No 326
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.55 E-value=0.13 Score=48.75 Aligned_cols=129 Identities=14% Similarity=0.099 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIE-AGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~ 250 (399)
.++.+.+.++++. ..+ .|.|||-+.+.-|- |. -=|.+.|.+++..+++. ++..
T Consensus 20 ~iD~~~l~~lv~~-------li~~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~----~~gr 73 (293)
T 1f6k_A 20 TINEKGLRQIIRH-------NIDKMKVDGLYVGGSTGE----NF-----------MLSTEEKKEIFRIAKDE----AKDQ 73 (293)
T ss_dssp CBCHHHHHHHHHH-------HHHTSCCSEEEESSGGGT----GG-----------GSCHHHHHHHHHHHHHH----HTTS
T ss_pred CcCHHHHHHHHHH-------HHhhCCCcEEEeCccccc----hh-----------hCCHHHHHHHHHHHHHH----hCCC
Confidence 3555555555554 466 89999998876541 11 12456776555555544 4333
Q ss_pred -ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----
Q 015862 251 -RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A----- 323 (399)
Q Consensus 251 -~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~----- 323 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. +
T Consensus 74 vpviaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-~~~l~~~f~~va~a~~lPiilYn~P~~t 142 (293)
T 1f6k_A 74 IALIAQVG----------SVNLKEAVELGKYATELGYDCLSAVTPFYYKFS-FPEIKHYYDTIIAETGSNMIVYSIPFLT 142 (293)
T ss_dssp SEEEEECC----------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_pred CeEEEecC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEECcccc
Confidence 5655343 335677999999999999999988877654321 111234566777888899664 3
Q ss_pred C-CCCHHHHHHHHHc
Q 015862 324 G-GYDREDGNKAIAE 337 (399)
Q Consensus 324 G-git~~~a~~~L~~ 337 (399)
| .++++...++.+.
T Consensus 143 g~~l~~~~~~~La~~ 157 (293)
T 1f6k_A 143 GVNMGIEQFGELYKN 157 (293)
T ss_dssp CCCCCHHHHHHHHTS
T ss_pred CcCCCHHHHHHHhcC
Confidence 3 2488888887643
No 327
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.55 E-value=0.24 Score=44.86 Aligned_cols=117 Identities=16% Similarity=0.180 Sum_probs=69.4
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce-EEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV-GIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v-~vrls~~~~~~~ 264 (399)
.+.|+.+.++|+++|.+. + .+.+++||+.++- |+ ++-...+.+ ..
T Consensus 39 ~~~a~~~~~~G~~~i~~~----------------------~----------~~~i~~i~~~~~~-p~i~~~~~~~~~-~~ 84 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN----------------------S----------VRDIKEIQAITDL-PIIGIIKKDYPP-QE 84 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE----------------------S----------HHHHHHHHTTCCS-CEEEECBCCCTT-SC
T ss_pred HHHHHHHHHCCCcEeecC----------------------C----------HHHHHHHHHhCCC-CEEeeEcCCCCc-cc
Confidence 666777788999999864 0 3568899988742 44 331111100 00
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V 343 (399)
.....+. +.++.+.+.|+|+++++......+. .....+.++.+|+.++ .+++ .+--|++++..+++.| +|+|
T Consensus 85 ~~i~~~~----~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~~~~v~-~~~~t~~ea~~a~~~G-ad~i 157 (234)
T 1yxy_A 85 PFITATM----TEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYPNQLLM-ADISTFDEGLVAHQAG-IDFV 157 (234)
T ss_dssp CCBSCSH----HHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCTTCEEE-EECSSHHHHHHHHHTT-CSEE
T ss_pred cccCChH----HHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCCCCeEE-EeCCCHHHHHHHHHcC-CCEE
Confidence 1111122 3355567889999998754321110 0112457788888774 4433 3323899999999998 9999
No 328
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.52 E-value=0.076 Score=50.44 Aligned_cols=129 Identities=15% Similarity=0.143 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+++..+++++. |.-+
T Consensus 24 ~iD~~~l~~lv~~l-------i~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~---grvp 78 (297)
T 3flu_A 24 SIHYEQLRDLIDWH-------IENGTDGIVAVGTTGE----SA-----------TLSVEEHTAVIEAVVKHVA---KRVP 78 (297)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEeCccccC----cc-----------cCCHHHHHHHHHHHHHHhC---CCCc
Confidence 45556666665554 6799999998876642 11 1245677666555555443 2226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|.+++++||+.- |.
T Consensus 79 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 147 (297)
T 3flu_A 79 VIAGTG----------ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPS-QEGIYQHFKTIAEATSIPMIIYNVPGRTVV 147 (297)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHSS
T ss_pred EEEeCC----------CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEECCchhcc
Confidence 665333 335778999999999999999988877654321 1112345667778888996543 22
Q ss_pred -CCHHHHHHHHH
Q 015862 326 -YDREDGNKAIA 336 (399)
Q Consensus 326 -it~~~a~~~L~ 336 (399)
++++...++.+
T Consensus 148 ~l~~~~~~~La~ 159 (297)
T 3flu_A 148 SMTNDTILRLAE 159 (297)
T ss_dssp CCCHHHHHHHTT
T ss_pred CCCHHHHHHHHc
Confidence 37888777664
No 329
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.48 E-value=0.11 Score=49.60 Aligned_cols=128 Identities=12% Similarity=0.139 Sum_probs=80.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCC-CchhhhhHHHHHHHHHHHHHhCCC
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYG-GSLENRCRFALEIVEAVSNEIGAD 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yG-GslenR~r~~~eii~avR~~vg~~ 250 (399)
.++.+.+.++++.+ .+.|.|||-+.+..| |+- =|.+.|.+++..+++.+. |.-
T Consensus 33 ~iD~~~l~~lv~~l-------i~~Gv~gl~v~GttG----------------E~~~Ls~~Er~~v~~~~~~~~~---grv 86 (304)
T 3cpr_A 33 DIDIAAGREVAAYL-------VDKGLDSLVLAGTTG----------------ESPTTTAAEKLELLKAVREEVG---DRA 86 (304)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCCEEEESSTTT----------------TTTTSCHHHHHHHHHHHHHHHT---TTS
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHHHHhC---CCC
Confidence 35555555555544 678999999887654 221 256677666555554443 222
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----C
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----G 324 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 324 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |
T Consensus 87 pviaGvg----------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~-~~~l~~~f~~ia~a~~lPiilYn~P~~tg 155 (304)
T 3cpr_A 87 KLIAGVG----------TNNTRTSVELAEAAASAGADGLLVVTPYYSKPS-QEGLLAHFGAIAAATEVPICLYDIPGRSG 155 (304)
T ss_dssp EEEEECC----------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred cEEecCC----------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 5655343 335677999999999999999988877554321 111233556677888899664 3 3
Q ss_pred C-CCHHHHHHHHH
Q 015862 325 G-YDREDGNKAIA 336 (399)
Q Consensus 325 g-it~~~a~~~L~ 336 (399)
. ++++...++.+
T Consensus 156 ~~l~~~~~~~La~ 168 (304)
T 3cpr_A 156 IPIESDTMRRLSE 168 (304)
T ss_dssp SCCCHHHHHHHTT
T ss_pred cCCCHHHHHHHHc
Confidence 2 47888777754
No 330
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.45 E-value=0.083 Score=49.99 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=80.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+++..++ ++++..
T Consensus 18 ~iD~~~l~~lv~~l-------i~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~----~~~~gr~ 71 (291)
T 3tak_A 18 GVDWKSLEKLVEWH-------IEQGTNSIVAVGTTGE----AS-----------TLSMEEHTQVIKEII----RVANKRI 71 (291)
T ss_dssp CBCHHHHHHHHHHH-------HHHTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHH----HHHTTSS
T ss_pred CcCHHHHHHHHHHH-------HHCCCCEEEECccccc----cc-----------cCCHHHHHHHHHHHH----HHhCCCC
Confidence 45666666666554 6789999998876642 11 124567765555444 444333
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------C
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------G 324 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------G 324 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|.+++++||+.- |
T Consensus 72 pviaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (291)
T 3tak_A 72 PIIAGTG----------ANSTREAIELTKAAKDLGADAALLVTPYYNKPT-QEGLYQHYKAIAEAVELPLILYNVPGRTG 140 (291)
T ss_dssp CEEEECC----------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred eEEEeCC----------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEecccccC
Confidence 6665333 335678999999999999999988877654321 1112345666777788886533 2
Q ss_pred C-CCHHHHHHHHH
Q 015862 325 G-YDREDGNKAIA 336 (399)
Q Consensus 325 g-it~~~a~~~L~ 336 (399)
. ++++...++.+
T Consensus 141 ~~l~~~~~~~La~ 153 (291)
T 3tak_A 141 VDLSNDTAVRLAE 153 (291)
T ss_dssp CCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHHc
Confidence 2 37887777664
No 331
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.44 E-value=0.15 Score=51.37 Aligned_cols=124 Identities=14% Similarity=0.012 Sum_probs=85.1
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
..|+.+|+|+|-|.++. |+ + .-+.++++.+++. |= .+.+-++-
T Consensus 124 ~ea~~~GAD~ILLi~a~-------l~-------~----------~~l~~l~~~a~~l-gm-~~LvEvh~----------- 166 (452)
T 1pii_A 124 YLARYYQADACLLMLSV-------LD-------D----------DQYRQLAAVAHSL-EM-GVLTEVSN----------- 166 (452)
T ss_dssp HHHHHTTCSEEEEETTT-------CC-------H----------HHHHHHHHHHHHT-TC-EEEEEECS-----------
T ss_pred HHHHHcCCCEEEEEccc-------CC-------H----------HHHHHHHHHHHHc-CC-eEEEEeCC-----------
Confidence 34888999999988764 11 1 2467777777773 42 45555542
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEec
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 346 (399)
.++. . ...+.|.++|-+..+.+... ....+....+.+.+ ++++|+-+|| |++++..+.+. +|.|.+|
T Consensus 167 -~eE~---~-~A~~lga~iIGinnr~L~t~---~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avLVG 236 (452)
T 1pii_A 167 -EEEQ---E-RAIALGAKVVGINNRDLRDL---SIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF--ANGFLIG 236 (452)
T ss_dssp -HHHH---H-HHHHTTCSEEEEESEETTTT---EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT--CSEEEEC
T ss_pred -HHHH---H-HHHHCCCCEEEEeCCCCCCC---CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh--CCEEEEc
Confidence 2332 2 22356899988876544321 12345566666666 4679999999 89999999877 9999999
Q ss_pred hHHhhCCcHHHHHH
Q 015862 347 RLFLANPDLPRRFE 360 (399)
Q Consensus 347 R~~iadPdl~~k~~ 360 (399)
.+++..+|....++
T Consensus 237 ealmr~~d~~~~~~ 250 (452)
T 1pii_A 237 SALMAHDDLHAAVR 250 (452)
T ss_dssp HHHHTCSCHHHHHH
T ss_pred HHHcCCcCHHHHHH
Confidence 99999998766554
No 332
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.43 E-value=0.085 Score=49.94 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=77.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
++.+.+.++++ ...+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+.. .-+|
T Consensus 19 iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~g---r~pv 73 (291)
T 3a5f_A 19 VDFDKLSELIE-------WHIKSKTDAIIVCGTTGE----AT-----------TMTETERKETIKFVIDKVNK---RIPV 73 (291)
T ss_dssp BCHHHHHHHHH-------HHHHTTCCEEEESSGGGT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSCE
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHHHhCC---CCcE
Confidence 44455555544 446789999998876541 11 12456676655555544432 2256
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-----CC-
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-----GG- 325 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----Gg- 325 (399)
.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |.
T Consensus 74 i~Gvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~ 142 (291)
T 3a5f_A 74 IAGTG----------SNNTAASIAMSKWAESIGVDGLLVITPYYNKTT-QKGLVKHFKAVSDAVSTPIIIYNVPGRTGLN 142 (291)
T ss_dssp EEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-HHHHHHHC-CTGGGCCSCEEEEECHHHHSCC
T ss_pred EEeCC----------cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeCccccCCC
Confidence 55443 235677999999999999999988877654321 111123445566677888654 2 32
Q ss_pred CCHHHHHHHHH
Q 015862 326 YDREDGNKAIA 336 (399)
Q Consensus 326 it~~~a~~~L~ 336 (399)
++++...++.+
T Consensus 143 l~~~~~~~La~ 153 (291)
T 3a5f_A 143 ITPGTLKELCE 153 (291)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHHc
Confidence 47887777754
No 333
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.42 E-value=0.031 Score=51.31 Aligned_cols=83 Identities=18% Similarity=0.169 Sum_probs=64.6
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHH
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
.+++..+++.|.+.|+..+++...+ +...+.++.+++.++..+++.|.+ |.++++.+++.| +|||...-
T Consensus 45 ~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG-A~fIvsP~-- 114 (232)
T 4e38_A 45 AEDIIPLGKVLAENGLPAAEITFRS-------DAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG-ATFVVSPG-- 114 (232)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT-CSEEECSS--
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCC-------CCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC-CCEEEeCC--
Confidence 3457889999999999999986432 123467888999887778888887 999999999999 99998753
Q ss_pred hhCCcHHHHHHh-CCC
Q 015862 350 LANPDLPRRFEL-NAP 364 (399)
Q Consensus 350 iadPdl~~k~~~-g~~ 364 (399)
.||++.+..++ |.+
T Consensus 115 -~~~~vi~~~~~~gi~ 129 (232)
T 4e38_A 115 -FNPNTVRACQEIGID 129 (232)
T ss_dssp -CCHHHHHHHHHHTCE
T ss_pred -CCHHHHHHHHHcCCC
Confidence 57777766554 444
No 334
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=95.42 E-value=0.6 Score=45.23 Aligned_cols=142 Identities=11% Similarity=0.044 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec
Q 015862 178 IPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 257 (399)
Q Consensus 178 I~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls 257 (399)
|+.+++.-.++.+.+.++||+-|-|-+.+- ++|...+...++++..++. |- .|-.-|.
T Consensus 106 ~~~~l~~~~~~i~~~i~~GFtSVMiDgS~l--------------------p~eENi~~Tk~vv~~ah~~-gv-sVEaElG 163 (349)
T 3elf_A 106 VRPLLAISAQRVSKGGNPLFQSHMWDGSAV--------------------PIDENLAIAQELLKAAAAA-KI-ILEIEIG 163 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCSCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHT-TC-EEEEEES
T ss_pred hhhhHHHHHHHHHHHhhcCCCEEEecCCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEee
Confidence 444555555666777778999999998761 5788899999999998774 21 2333332
Q ss_pred ---CCcccCC----CCCCChHHHHHHHHHhhh--hhCceEEEEeCCCcccccc-cCC--CchhhHHHHhhc---------
Q 015862 258 ---PFANYME----SGDSNPEALGLYMAESLN--KYGILYCHMVEPRMKTREE-KSE--CPHSLLPMRKAF--------- 316 (399)
Q Consensus 258 ---~~~~~~~----~~~~~~~~~~~~l~~~Le--~~Gvd~l~v~~~~~~~~~~-~~~--~~~~~~~ir~~~--------- 316 (399)
..++... .....+.+++.++++.+. ..|+|.|-++-++....|. ..+ ..+.++.|++.+
T Consensus 164 ~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~ 243 (349)
T 3elf_A 164 VVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPAD 243 (349)
T ss_dssp CCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTT
T ss_pred ccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccc
Confidence 2111100 011234667777776653 2349999988776543332 222 345677787765
Q ss_pred --CCcEEEeCC--CCHHHHHHHHHcCCCc
Q 015862 317 --KGTFLVAGG--YDREDGNKAIAEGRAD 341 (399)
Q Consensus 317 --~~pvi~~Gg--it~~~a~~~L~~G~~D 341 (399)
++|++.=|+ ++.++..++++.|.+-
T Consensus 244 ~~~vpLVlHGgSG~p~e~i~~ai~~GV~K 272 (349)
T 3elf_A 244 AKPFDFVFHGGSGSLKSEIEEALRYGVVK 272 (349)
T ss_dssp CCCCCEEECCCTTCCHHHHHHHHHTTEEE
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHcCCEE
Confidence 588766554 5788999999999543
No 335
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.40 E-value=0.08 Score=50.15 Aligned_cols=151 Identities=9% Similarity=0.039 Sum_probs=90.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+..|- |.+ =|.+.|.+++..+++.+. |.-+
T Consensus 19 ~iD~~~l~~lv~~-------li~~Gv~gl~v~GttGE----~~~-----------Lt~~Er~~v~~~~~~~~~---grvp 73 (292)
T 3daq_A 19 KVNLEALKAHVNF-------LLENNAQAIIVNGTTAE----SPT-----------LTTDEKELILKTVIDLVD---KRVP 73 (292)
T ss_dssp EECHHHHHHHHHH-------HHHTTCCEEEESSGGGT----GGG-----------SCHHHHHHHHHHHHHHHT---TSSC
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEECccccc----ccc-----------CCHHHHHHHHHHHHHHhC---CCCc
Confidence 4555555555554 46799999998876642 111 245777766655555443 2226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------CC
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------GG 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------Gg 325 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.- |.
T Consensus 74 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-~~~l~~~f~~ia~a~~lPiilYn~P~~tg~ 142 (292)
T 3daq_A 74 VIAGTG----------TNDTEKSIQASIQAKALGADAIMLITPYYNKTN-QRGLVKHFEAIADAVKLPVVLYNVPSRTNM 142 (292)
T ss_dssp EEEECC----------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-HHHHHHHHHHHHHHHCSCEEEEECHHHHSC
T ss_pred EEEeCC----------cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEecccccCC
Confidence 665343 235677999999999999999988877654321 1112345667778889996643 32
Q ss_pred -CCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 326 -YDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 326 -it~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
++++...++.+.. -+|++ .-.-.|.+...++++
T Consensus 143 ~l~~~~~~~La~~p--nivgi-K~ssgd~~~~~~~~~ 176 (292)
T 3daq_A 143 TIEPETVEILSQHP--YIVAL-KDATNDFEYLEEVKK 176 (292)
T ss_dssp CCCHHHHHHHHTST--TEEEE-EECCCCHHHHHHHHT
T ss_pred CCCHHHHHHHhcCC--CEEEE-EeCCCCHHHHHHHHH
Confidence 4888888776533 24443 111224444555554
No 336
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=95.36 E-value=0.17 Score=48.58 Aligned_cols=138 Identities=18% Similarity=0.136 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCc-hhhhhHHHHHHHHHHHHHhC-CC-ceEEEecCCc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGS-LENRCRFALEIVEAVSNEIG-AD-RVGIRLSPFA 260 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGs-lenR~r~~~eii~avR~~vg-~~-~v~vrls~~~ 260 (399)
+..+.+++..++|+.||.|-.+-+ .+|....||. +-... -..+-|++++++.. .+ .|.-|.-...
T Consensus 117 ~v~~tv~~l~~aGaagv~iED~~~-----------~k~cgH~~gk~L~p~~-e~~~rI~Aa~~A~~~~~~~I~ARtda~a 184 (318)
T 1zlp_A 117 NVQRFIRELISAGAKGVFLEDQVW-----------PKKCGHMRGKAVVPAE-EHALKIAAAREAIGDSDFFLVARTDARA 184 (318)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCS-----------SCCCSSSSCCCBCCHH-HHHHHHHHHHHHHTTSCCEEEEEECTHH
T ss_pred HHHHHHHHHHHcCCcEEEECCCCC-----------CccccCCCCCccCCHH-HHHHHHHHHHHhcccCCcEEEEeeHHhh
Confidence 346677778889999999987642 3454444543 33222 33456666666652 22 4555664310
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe---CCCCH-HHHHHHHH
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA---GGYDR-EDGNKAIA 336 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L~ 336 (399)
...++++++-++.++++|+|.|-+... +..+.++.|.+.+++|+++| ++.++ -..+++-+
T Consensus 185 -------~~gl~~ai~Ra~Ay~eAGAd~i~~e~~---------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~ 248 (318)
T 1zlp_A 185 -------PHGLEEGIRRANLYKEAGADATFVEAP---------ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKE 248 (318)
T ss_dssp -------HHHHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHH
T ss_pred -------hcCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHH
Confidence 113567888999999999998876421 23467888999999998544 22221 12344555
Q ss_pred cCCCcEEEechHHh
Q 015862 337 EGRADLVVYGRLFL 350 (399)
Q Consensus 337 ~G~~D~V~~gR~~i 350 (399)
-| +.+|.++-.++
T Consensus 249 lG-v~~v~~~~~~~ 261 (318)
T 1zlp_A 249 MG-FHLIAHSLTAV 261 (318)
T ss_dssp HT-CCEEEECSHHH
T ss_pred cC-CeEEEEchHHH
Confidence 56 99999976655
No 337
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=95.32 E-value=0.41 Score=45.88 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=84.3
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC---Cccc-CC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP---FANY-ME 264 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~---~~~~-~~ 264 (399)
.++|.++||+-|-|.+.| =++|...+...++++..++. |- .|-.-|.. .++. ..
T Consensus 91 i~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed~v~~ 148 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDASH--------------------HPFDENVRITKEVVAYAHAR-SV-SVEAELGTLGGIEEDVQN 148 (323)
T ss_dssp HHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESCC---------
T ss_pred HHHHHHcCCCeEEecCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeCCccCCccCccc
Confidence 567888999999999776 15788899999999998764 21 23333322 1111 00
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc--cCC----CchhhHHHHhhcCCcEEEeC--------------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE--KSE----CPHSLLPMRKAFKGTFLVAG-------------- 324 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~--~~~----~~~~~~~ir~~~~~pvi~~G-------------- 324 (399)
-....+.+++.++++ +.|+|.|-+.-++....+. ..+ ..+.++.|++.+++|++.=|
T Consensus 149 ~~~yTdPeea~~Fv~---~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 149 TVQLTEPQDAKKFVE---LTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp -CCCCCHHHHHHHHH---HHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH---HHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHH
Confidence 011234566666665 5799999988776443333 222 34678899999999987666
Q ss_pred ---------CCCHHHHHHHHHcCCCc
Q 015862 325 ---------GYDREDGNKAIAEGRAD 341 (399)
Q Consensus 325 ---------git~~~a~~~L~~G~~D 341 (399)
|+..++..++++.|.+-
T Consensus 226 ~gg~~~~~~Gvp~e~i~~ai~~GV~K 251 (323)
T 2isw_A 226 YGGKMPDAVGVPIESIVHAIGEGVCK 251 (323)
T ss_dssp TTCCCTTCBCCCHHHHHHHHHTTEEE
T ss_pred hccccccCCCCCHHHHHHHHHCCCeE
Confidence 66788999999999543
No 338
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.22 E-value=0.14 Score=46.85 Aligned_cols=119 Identities=14% Similarity=0.151 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
-.+-|+.+.+.|++.|||-. |+. -..|.|+++|++++.-.|+. ..
T Consensus 48 a~~~a~al~~gGi~~iEvt~----------------~t~-----------~a~e~I~~l~~~~~~~~iGa--GT------ 92 (232)
T 4e38_A 48 IIPLGKVLAENGLPAAEITF----------------RSD-----------AAVEAIRLLRQAQPEMLIGA--GT------ 92 (232)
T ss_dssp HHHHHHHHHHTTCCEEEEET----------------TST-----------THHHHHHHHHHHCTTCEEEE--EC------
T ss_pred HHHHHHHHHHCCCCEEEEeC----------------CCC-----------CHHHHHHHHHHhCCCCEEeE--CC------
Confidence 36677888999999999852 121 14799999999985323443 11
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVV 344 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 344 (399)
-.+.+ -++...++|++|++. |. ...+.++..++ .++|++. |-.|++++.++++.| +|+|.
T Consensus 93 ---Vlt~~----~a~~Ai~AGA~fIvs--P~--------~~~~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~G-ad~vK 152 (232)
T 4e38_A 93 ---ILNGE----QALAAKEAGATFVVS--PG--------FNPNTVRACQE-IGIDIVP-GVNNPSTVEAALEMG-LTTLK 152 (232)
T ss_dssp ---CCSHH----HHHHHHHHTCSEEEC--SS--------CCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTT-CCEEE
T ss_pred ---cCCHH----HHHHHHHcCCCEEEe--CC--------CCHHHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcC-CCEEE
Confidence 11223 355566789999972 21 13345555555 4777765 334999999999999 99998
Q ss_pred echHHhhC----CcHHHHHHh
Q 015862 345 YGRLFLAN----PDLPRRFEL 361 (399)
Q Consensus 345 ~gR~~iad----Pdl~~k~~~ 361 (399)
+ |-++ |++.+.++.
T Consensus 153 ~---FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 153 F---FPAEASGGISMVKSLVG 170 (232)
T ss_dssp E---CSTTTTTHHHHHHHHHT
T ss_pred E---CcCccccCHHHHHHHHH
Confidence 8 3333 466777765
No 339
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=95.18 E-value=0.041 Score=50.32 Aligned_cols=38 Identities=8% Similarity=0.011 Sum_probs=29.7
Q ss_pred cCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 316 FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 316 ~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.+.-|-++.|++.+....+.+--.+.=|.+|..++++-
T Consensus 185 lGL~VnAGHgL~y~Nv~~ia~ip~i~ElnIGHaiia~A 222 (243)
T 1m5w_A 185 LGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRA 222 (243)
T ss_dssp TTCEEEEESSCCTTTHHHHHTCTTEEEEEECHHHHHHH
T ss_pred cCCEEecCCCCCHHHHHHHhhCCCCeEEccCHHHHHHH
Confidence 46778888899888777766545578899999998864
No 340
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.16 E-value=0.2 Score=47.47 Aligned_cols=127 Identities=12% Similarity=-0.001 Sum_probs=80.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.++ ++.++++++..
T Consensus 20 ~iD~~~l~~lv~~l-------i~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~gr~ 73 (294)
T 3b4u_A 20 TVDIDAMIAHARRC-------LSNGCDSVTLFGTTGE----GC-----------SVGSRERQAI----LSSFIAAGIAPS 73 (294)
T ss_dssp SBCHHHHHHHHHHH-------HHTTCSEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHTTCCGG
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCC
Confidence 35555555555544 6689999998876541 11 1245666654 44455555433
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhc---CCcEEE-e--
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAF---KGTFLV-A-- 323 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~---~~pvi~-~-- 323 (399)
+|.+=++. .+..+++++++..++.|+|.+-+..|.+.. + .......+.+.|-+++ ++||+. +
T Consensus 74 pviaGvg~----------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 74 RIVTGVLV----------DSIEDAADQSAEALNAGARNILLAPPSYFKNV-SDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp GEEEEECC----------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSC-CHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred cEEEeCCC----------ccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 56554443 356778999999999999999887776543 2 1111234566778888 899664 3
Q ss_pred ---C-CCCHHHHHHHH
Q 015862 324 ---G-GYDREDGNKAI 335 (399)
Q Consensus 324 ---G-git~~~a~~~L 335 (399)
| .++++...++.
T Consensus 143 ~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 143 SVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHHSCCCCHHHHHHHH
T ss_pred chhCcCCCHHHHHHHH
Confidence 3 24889888887
No 341
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.13 E-value=0.27 Score=46.93 Aligned_cols=131 Identities=16% Similarity=0.103 Sum_probs=81.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+..|- |. -=|.+.|.+++..+++.+. |.-+
T Consensus 25 ~iD~~~l~~lv~~-------li~~Gv~gl~v~GtTGE----~~-----------~Ls~~Er~~v~~~~~~~~~---grvp 79 (309)
T 3fkr_A 25 DLDLASQKRAVDF-------MIDAGSDGLCILANFSE----QF-----------AITDDERDVLTRTILEHVA---GRVP 79 (309)
T ss_dssp SBCHHHHHHHHHH-------HHHTTCSCEEESSGGGT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSC
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEECccccC----cc-----------cCCHHHHHHHHHHHHHHhC---CCCc
Confidence 3555555555554 46799999998876642 11 1246677666555555442 2226
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc--ccccCCCchhhHHHHhhcCCcEEE-e----C
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT--REEKSECPHSLLPMRKAFKGTFLV-A----G 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~--~~~~~~~~~~~~~ir~~~~~pvi~-~----G 324 (399)
|.+=++. .+..+++++++..++.|+|.+-+..|.+.. .........+.+.|-+++++||+. + |
T Consensus 80 viaGvg~----------~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg 149 (309)
T 3fkr_A 80 VIVTTSH----------YSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASG 149 (309)
T ss_dssp EEEECCC----------SSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGC
T ss_pred EEEecCC----------chHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 6654432 356778999999999999999887665421 001111234566788888899654 2 3
Q ss_pred C-CCHHHHHHHHHc
Q 015862 325 G-YDREDGNKAIAE 337 (399)
Q Consensus 325 g-it~~~a~~~L~~ 337 (399)
. ++++...++.++
T Consensus 150 ~~l~~~~~~~La~~ 163 (309)
T 3fkr_A 150 TALSAPFLARMARE 163 (309)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhh
Confidence 2 488888888753
No 342
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.09 E-value=0.095 Score=49.86 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=81.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+... -+
T Consensus 21 ~iD~~~l~~lv~~l-------i~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v~~~~~~~~~gr---vp 75 (300)
T 3eb2_A 21 RVRADVMGRLCDDL-------IQAGVHGLTPLGSTGE----FA-----------YLGTAQREAVVRATIEAAQRR---VP 75 (300)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCSCBBTTSGGGT----GG-----------GCCHHHHHHHHHHHHHHHTTS---SC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----cc-----------ccCHHHHHHHHHHHHHHhCCC---Cc
Confidence 45566666666554 5699999987765541 11 125677776666555554322 25
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeC-----C-
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAG-----G- 325 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g- 325 (399)
|.+=++. .+..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+.-. +
T Consensus 76 viaGvg~----------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 144 (300)
T 3eb2_A 76 VVAGVAS----------TSVADAVAQAKLYEKLGADGILAILEAYFPLK-DAQIESYFRAIADAVEIPVVIYTNPQFQRS 144 (300)
T ss_dssp BEEEEEE----------SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCC-HHHHHHHHHHHHHHCSSCEEEEECTTTCSS
T ss_pred EEEeCCC----------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEEECccccCC
Confidence 5554443 34677899999999999999988777654321 11123456678888899965322 2
Q ss_pred -CCHHHHHHHHH
Q 015862 326 -YDREDGNKAIA 336 (399)
Q Consensus 326 -it~~~a~~~L~ 336 (399)
++++...++.+
T Consensus 145 ~l~~~~~~~La~ 156 (300)
T 3eb2_A 145 DLTLDVIARLAE 156 (300)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHHc
Confidence 37887777743
No 343
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.06 E-value=0.33 Score=45.52 Aligned_cols=155 Identities=15% Similarity=0.067 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCCCEEEEcc-ccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHG-AHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~-~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+ +.+. . + -..|--.=+++ -.+..+++|.+.+. -||.+.+--
T Consensus 26 ~~sA~~~~~aG~~ai~vsg~s~a~---~-~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~pviaD~d~------ 85 (275)
T 2ze3_A 26 VASARLLEAAGFTAIGTTSAGIAH---A-R-----GRTDGQTLTRD----EMGREVEAIVRAVA-IPVNADIEA------ 85 (275)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHH---H-S-----CCCSSSSSCHH----HHHHHHHHHHHHCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH---h-C-----CCCCCCCCCHH----HHHHHHHHHHhhcC-CCEEeecCC------
Confidence 6678889999999999774 2221 0 0 11221011233 33555666666664 377776632
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH---hh---cCCcEEEeCCC-C----------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR---KA---FKGTFLVAGGY-D---------- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir---~~---~~~pvi~~Ggi-t---------- 327 (399)
|++...+++.+.++.|+++|++.+++-.........-.+..+.+.+|+ ++ .++|++.+++- .
T Consensus 86 -Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~ 164 (275)
T 2ze3_A 86 -GYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDE 164 (275)
T ss_dssp -CSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHH
T ss_pred -CCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccch
Confidence 223356778889999999999999986543211001111223344433 33 26777777664 2
Q ss_pred ------HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 ------REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 ------~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
.+.+..+.+.| ||.|.+ ..+.+++..+++.+...
T Consensus 165 ~~~~~ai~Ra~ay~eAG-Ad~i~~--e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 165 ERLAETVRRGQAYADAG-ADGIFV--PLALQSQDIRALADALR 204 (275)
T ss_dssp HHHHHHHHHHHHHHHTT-CSEEEC--TTCCCHHHHHHHHHHCS
T ss_pred hhHHHHHHHHHHHHHCC-CCEEEE--CCCCCHHHHHHHHHhcC
Confidence 12344455566 999988 33577788888887544
No 344
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.05 E-value=0.13 Score=48.23 Aligned_cols=102 Identities=20% Similarity=0.151 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE--EecCCc-
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI--RLSPFA- 260 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v--rls~~~- 260 (399)
+-++.|.+..++|+++|.|-.+. -..+.|+++.++ |. ||.- .|.|-.
T Consensus 96 ~a~~na~rl~kaGa~aVklEdg~----------------------------e~~~~I~al~~a-gI-pV~gHiGLtPQs~ 145 (275)
T 1o66_A 96 QAFAAAAELMAAGAHMVKLEGGV----------------------------WMAETTEFLQMR-GI-PVCAHIGLTPQSV 145 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEECSG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGGT
T ss_pred HHHHHHHHHHHcCCcEEEECCcH----------------------------HHHHHHHHHHHc-CC-CeEeeeccCceee
Confidence 34666777778999999998651 124555555443 22 4442 333311
Q ss_pred ----ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC
Q 015862 261 ----NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG 325 (399)
Q Consensus 261 ----~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 325 (399)
+|.-.+..+..++.++-++.++++|++.|-+... + .+.++.|.+.+++|+|+.|.
T Consensus 146 ~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v---------p-~~~a~~it~~l~iP~igIGa 204 (275)
T 1o66_A 146 FAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECV---------L-AELAKKVTETVSCPTIGIGA 204 (275)
T ss_dssp TC-----------CHHHHHHHHHHHHHTTCSEEEEESC---------C-HHHHHHHHHHCSSCEEEESS
T ss_pred cccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecC---------C-HHHHHHHHHhCCCCEEEECC
Confidence 1110111133567888899999999998876321 1 25788899999999988764
No 345
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.99 E-value=0.11 Score=50.84 Aligned_cols=92 Identities=18% Similarity=0.144 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHh
Q 015862 235 FALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRK 314 (399)
Q Consensus 235 ~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~ 314 (399)
-..+.++++|+.. ..++++-+... + .+.++.+.++|+|+|++.... . ......+.++.+|+
T Consensus 82 ~~~~~I~~vk~~~-~~pvga~ig~~----------~----~e~a~~l~eaGad~I~ld~a~-G---~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 82 SQVNEVLKVKNSG-GLRVGAAIGVN----------E----IERAKLLVEAGVDVIVLDSAH-G---HSLNIIRTLKEIKS 142 (361)
T ss_dssp HHHHHHHHHHHTT-CCCCEEEECTT----------C----HHHHHHHHHTTCSEEEECCSC-C---SBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-CceEEEEeCCC----------H----HHHHHHHHHcCcCeEEEeCCC-C---CcHHHHHHHHHHHH
Confidence 3457777887653 23677766541 1 446777888999999985331 1 01112356777888
Q ss_pred hcCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 315 AFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 315 ~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+++||++.+-.|+++++.+++.| +|+|.+|
T Consensus 143 ~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG 173 (361)
T 3khj_A 143 KMNIDVIVGNVVTEEATKELIENG-ADGIKVG 173 (361)
T ss_dssp HCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred hcCCcEEEccCCCHHHHHHHHHcC-cCEEEEe
Confidence 888898874445999999999998 9999885
No 346
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=94.98 E-value=0.049 Score=50.58 Aligned_cols=38 Identities=11% Similarity=0.005 Sum_probs=27.4
Q ss_pred cCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 316 FKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 316 ~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.+.-|-++.|++.+....+-+--.+.=|.+|.+++++-
T Consensus 213 lGL~VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~A 250 (278)
T 3gk0_A 213 LGLKVNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHA 250 (278)
T ss_dssp TTCEEEECTTCCTTTHHHHHTCTTEEEEEECHHHHHHH
T ss_pred cCCEEecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHH
Confidence 46668788888777666543434477899999999874
No 347
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.97 E-value=0.18 Score=48.12 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHHh---CCC-ceEEEecC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNEI---GAD-RVGIRLSP 258 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~v---g~~-~v~vrls~ 258 (399)
+..+.+++.+++|+.||.|-..-+ .+|....+| .+-....+ .+-|++.|++. |++ .|.-|.-.
T Consensus 104 ~v~~~v~~l~~aGaagv~iEDq~~-----------~k~cgh~~gk~l~~~~e~-~~rI~Aa~~A~~~~~~d~~I~ARTDa 171 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQIL-----------TKRCGHLSGKKVVSRDEY-LVRIRAAVATKRRLRSDFVLIARTDA 171 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCC-----------CC--------CBCCHHHH-HHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCC-----------CcccCCCCCCeecCHHHH-HHHHHHHHHHHHhcCCCeEEEEechh
Confidence 346677888899999999986542 244444443 23322223 34444555443 656 46778754
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEe---CCCCH-HHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVA---GGYDR-EDGNK 333 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~---Ggit~-~~a~~ 333 (399)
.. ...++++++-++...++|+|.|-+... ...+.++.+.+.++ +||++| ++-+| -..++
T Consensus 172 ~~-------~~gldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~e 235 (307)
T 3lye_A 172 LQ-------SLGYEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEE 235 (307)
T ss_dssp HH-------HHCHHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHH
T ss_pred hh-------ccCHHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHH
Confidence 21 123678999999999999999876432 13356777777775 786553 33222 12344
Q ss_pred HHHcCCCcEEEechHHh
Q 015862 334 AIAEGRADLVVYGRLFL 350 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~i 350 (399)
+-+-| +..|..+-.++
T Consensus 236 L~~lG-v~~v~~~~~~~ 251 (307)
T 3lye_A 236 AKAMG-FRIMIFSFATL 251 (307)
T ss_dssp HHHHT-CSEEEEETTTH
T ss_pred HHHcC-CeEEEEChHHH
Confidence 44457 89998876443
No 348
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=94.95 E-value=0.23 Score=45.20 Aligned_cols=120 Identities=12% Similarity=0.048 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.++.+.++|.+.|||-. ++. -..+.++++++.+++-.++.-. .
T Consensus 31 ~~~~~~al~~gGv~~iel~~----------------k~~-----------~~~~~i~~l~~~~~~l~vgaGt-v------ 76 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITF----------------RSE-----------AAADAIRLLRANRPDFLIAAGT-V------ 76 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEET----------------TST-----------THHHHHHHHHHHCTTCEEEEES-C------
T ss_pred HHHHHHHHHHcCCCEEEEec----------------cCc-----------hHHHHHHHHHHhCcCcEEeeCc-E------
Confidence 46677888999999999862 111 1257888888888632333321 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVV 344 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 344 (399)
- ..+ -++...+.|+|++|. |. ...+.++..|+ .+.+++. |-.|++++.++++.| +|+|.
T Consensus 77 ---l-~~d----~~~~A~~aGAd~v~~--p~--------~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~G-ad~vk 135 (224)
T 1vhc_A 77 ---L-TAE----QVVLAKSSGADFVVT--PG--------LNPKIVKLCQD-LNFPITP-GVNNPMAIEIALEMG-ISAVK 135 (224)
T ss_dssp ---C-SHH----HHHHHHHHTCSEEEC--SS--------CCHHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTT-CCEEE
T ss_pred ---e-eHH----HHHHHHHCCCCEEEE--CC--------CCHHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCC-CCEEE
Confidence 1 122 234445679999973 21 12344566666 7777665 323999999999998 99999
Q ss_pred echHHhhC----CcHHHHHHhC
Q 015862 345 YGRLFLAN----PDLPRRFELN 362 (399)
Q Consensus 345 ~gR~~iad----Pdl~~k~~~g 362 (399)
+ |-+. |++.+.++.-
T Consensus 136 ~---Fpa~~~gG~~~lk~l~~~ 154 (224)
T 1vhc_A 136 F---FPAEASGGVKMIKALLGP 154 (224)
T ss_dssp E---TTTTTTTHHHHHHHHHTT
T ss_pred E---eeCccccCHHHHHHHHhh
Confidence 9 2222 3555556553
No 349
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=94.95 E-value=0.12 Score=48.46 Aligned_cols=134 Identities=19% Similarity=0.139 Sum_probs=75.5
Q ss_pred HHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchh-hhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCC
Q 015862 190 RNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLE-NRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 267 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGsle-nR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~ 267 (399)
...+++||.|| +|-. .|.+=.+|- -.|| +++.| .+.++.||++-.-+.+.+ ++
T Consensus 115 e~lk~~Gf~Gv-~N~ptvglidG~fr------------~~LEE~gm~~-~~eve~I~~A~~~gL~Ti---~~-------- 169 (286)
T 2p10_A 115 RELKEIGFAGV-QNFPTVGLIDGLFR------------QNLEETGMSY-AQEVEMIAEAHKLDLLTT---PY-------- 169 (286)
T ss_dssp HHHHHHTCCEE-EECSCGGGCCHHHH------------HHHHHTTCCH-HHHHHHHHHHHHTTCEEC---CE--------
T ss_pred HHHHHhCCceE-EECCCcccccchhh------------hhHhhcCCCH-HHHHHHHHHHHHCCCeEE---Ee--------
Confidence 56788999999 5643 443334442 2333 33333 344556665543342222 11
Q ss_pred CChHHHHHHHHHhhhhhCceEEEEeCCCc-cc-ccccCC-C----c----hhhHHHHhhcC-CcEEEeC-CC-CHHHHHH
Q 015862 268 SNPEALGLYMAESLNKYGILYCHMVEPRM-KT-REEKSE-C----P----HSLLPMRKAFK-GTFLVAG-GY-DREDGNK 333 (399)
Q Consensus 268 ~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~-~~-~~~~~~-~----~----~~~~~ir~~~~-~pvi~~G-gi-t~~~a~~ 333 (399)
-++.++ ++.+.++|.|+|-++-+.- +. ...... . . ...+.+++.-+ +.|++.| +| +++|++.
T Consensus 170 v~~~ee----A~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~ 245 (286)
T 2p10_A 170 VFSPED----AVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARF 245 (286)
T ss_dssp ECSHHH----HHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHH
T ss_pred cCCHHH----HHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHH
Confidence 123444 3455678999998876621 10 001100 1 1 12333444333 4466555 78 8999999
Q ss_pred HHHc--CCCcEEEechHHhhCC
Q 015862 334 AIAE--GRADLVVYGRLFLANP 353 (399)
Q Consensus 334 ~L~~--G~~D~V~~gR~~iadP 353 (399)
+|+. | +|.+..+.++..=|
T Consensus 246 ~l~~t~G-~~G~~gASsier~p 266 (286)
T 2p10_A 246 ILDSCQG-CHGFYGASSMERLP 266 (286)
T ss_dssp HHHHCTT-CCEEEESHHHHHHH
T ss_pred HHhcCCC-ccEEEeehhhhcCC
Confidence 9998 6 99999999998887
No 350
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.88 E-value=0.41 Score=45.66 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=81.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |.+ =|.+.|.+++..+++ ++|.-+
T Consensus 25 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~~-----------Lt~~Er~~v~~~~v~----~~grvp 78 (313)
T 3dz1_A 25 KIDDVSIDRLTDFY-------AEVGCEGVTVLGILGE----APK-----------LDAAEAEAVATRFIK----RAKSMQ 78 (313)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCSEEEESTGGGT----GGG-----------SCHHHHHHHHHHHHH----HCTTSE
T ss_pred CcCHHHHHHHHHHH-------HHCCCCEEEeCccCcC----hhh-----------CCHHHHHHHHHHHHH----HcCCCc
Confidence 45556666665554 6799999998876641 111 245667655554444 444336
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEe------
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVA------ 323 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~------ 323 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+. + .......+.+.|-++++ +||+.-
T Consensus 79 ViaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~~~-~-s~~~l~~~f~~va~a~~~~lPiilYn~P~~t 146 (313)
T 3dz1_A 79 VIVGVS----------APGFAAMRRLARLSMDAGAAGVMIAPPPSL-R-TDEQITTYFRQATEAIGDDVPWVLQDYPLTL 146 (313)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHHTCSEEEECCCTTC-C-SHHHHHHHHHHHHHHHCTTSCEEEEECHHHH
T ss_pred EEEecC----------CCCHHHHHHHHHHHHHcCCCEEEECCCCCC-C-CHHHHHHHHHHHHHhCCCCCcEEEEeCcccc
Confidence 665333 335678999999999999999988666422 1 11112345667888888 997642
Q ss_pred CC-CCHHHHHHHHHc
Q 015862 324 GG-YDREDGNKAIAE 337 (399)
Q Consensus 324 Gg-it~~~a~~~L~~ 337 (399)
|. ++++...++.++
T Consensus 147 g~~l~~~~~~~La~~ 161 (313)
T 3dz1_A 147 SVVMTPKVIRQIVMD 161 (313)
T ss_dssp CCCCCHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHh
Confidence 32 489888888754
No 351
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.85 E-value=0.12 Score=49.72 Aligned_cols=128 Identities=11% Similarity=0.071 Sum_probs=79.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-c
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-R 251 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~ 251 (399)
++.+.+.++++. ..+.|.|||-+.+..|- |. -=|.+.|.+++..+++ +++.. +
T Consensus 29 iD~~~l~~lv~~-------li~~Gv~gl~v~GtTGE----~~-----------~Ls~~Er~~v~~~~~~----~~~grvp 82 (318)
T 3qfe_A 29 LDLASQERYYAY-------LARSGLTGLVILGTNAE----AF-----------LLTREERAQLIATARK----AVGPDFP 82 (318)
T ss_dssp ECHHHHHHHHHH-------HHTTTCSEEEESSGGGT----GG-----------GSCHHHHHHHHHHHHH----HHCTTSC
T ss_pred CCHHHHHHHHHH-------HHHcCCCEEEeCccccC----hh-----------hCCHHHHHHHHHHHHH----HhCCCCc
Confidence 455555555554 46689999998877652 11 1245667655554444 44333 6
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc-cccccCCCchhhHHHHhhcCCcEEE------e-
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK-TREEKSECPHSLLPMRKAFKGTFLV------A- 323 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~-~~~~~~~~~~~~~~ir~~~~~pvi~------~- 323 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+. .+........+.+.|.+++++||+. +
T Consensus 83 viaGvg----------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~ 152 (318)
T 3qfe_A 83 IMAGVG----------AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCN 152 (318)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC---
T ss_pred EEEeCC----------CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccC
Confidence 665333 335677999999999999999988777432 1111111234566788888999653 2
Q ss_pred CC-CCHHHHHHHHH
Q 015862 324 GG-YDREDGNKAIA 336 (399)
Q Consensus 324 Gg-it~~~a~~~L~ 336 (399)
|- ++++...++.+
T Consensus 153 g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 153 GIDLDSDMITTIAR 166 (318)
T ss_dssp -CCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHh
Confidence 32 37888888876
No 352
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.84 E-value=0.096 Score=50.17 Aligned_cols=128 Identities=12% Similarity=0.115 Sum_probs=78.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++. ..+.|.|||-+.+.-|- |. -=|.+.|.+++..+++++. |.-+
T Consensus 29 ~iD~~~l~~lv~~-------li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~~~~~~~---grvp 83 (314)
T 3d0c_A 29 EIDWKGLDDNVEF-------LLQNGIEVIVPNGNTGE----FY-----------ALTIEEAKQVATRVTELVN---GRAT 83 (314)
T ss_dssp CBCHHHHHHHHHH-------HHHTTCSEECTTSGGGT----GG-----------GSCHHHHHHHHHHHHHHHT---TSSE
T ss_pred CCCHHHHHHHHHH-------HHHcCCCEEEECcccCC----hh-----------hCCHHHHHHHHHHHHHHhC---CCCe
Confidence 3555555555554 46789999997765541 11 1255677655555554433 2225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e--CCCCH
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A--GGYDR 328 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~--Ggit~ 328 (399)
|.+=++ . +..+++++++..++.|+|.+-+..|.+..+. ......+.+.|-+++++||+. + |-+++
T Consensus 84 ViaGvg----------~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~tg~l~~ 151 (314)
T 3d0c_A 84 VVAGIG----------Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYIT-DAGAVEYYRNIIEALDAPSIIYFKDAHLSD 151 (314)
T ss_dssp EEEEEC----------S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCC-HHHHHHHHHHHHHHSSSCEEEEECCTTSCT
T ss_pred EEecCC----------c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeCCCCcCH
Confidence 555332 3 4667899999999999999988777554321 111234556777888999665 3 22577
Q ss_pred HHHHHHHH
Q 015862 329 EDGNKAIA 336 (399)
Q Consensus 329 ~~a~~~L~ 336 (399)
+...++.+
T Consensus 152 ~~~~~La~ 159 (314)
T 3d0c_A 152 DVIKELAP 159 (314)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHc
Confidence 77777654
No 353
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.74 E-value=0.65 Score=43.05 Aligned_cols=74 Identities=19% Similarity=0.149 Sum_probs=50.6
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCC-cEEEeCCCCHH-----------HHHHHHHcCC
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKG-TFLVAGGYDRE-----------DGNKAIAEGR 339 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~-----------~a~~~L~~G~ 339 (399)
+...++++.-.++|++-+-++ ..-++.||+.++. .++.+.|+.++ +..++++.|
T Consensus 162 ~~V~~~A~~a~~aG~~GvV~s-------------a~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aG- 227 (255)
T 3ldv_A 162 DHVLRLATLTKNAGLDGVVCS-------------AQEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASG- 227 (255)
T ss_dssp HHHHHHHHHHHHTTCSEEECC-------------HHHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCEEEEC-------------HHHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcC-
Confidence 445667777677888776543 1246678888763 45666665221 256788888
Q ss_pred CcEEEechHHhhCCcHHHHH
Q 015862 340 ADLVVYGRLFLANPDLPRRF 359 (399)
Q Consensus 340 ~D~V~~gR~~iadPdl~~k~ 359 (399)
+|++.+||+++..+|-...+
T Consensus 228 ad~iVvGr~I~~a~dp~~a~ 247 (255)
T 3ldv_A 228 SDYLVIGRPITQAAHPEVVL 247 (255)
T ss_dssp CSEEEECHHHHTCSCHHHHH
T ss_pred CCEEEECHHHhCCCCHHHHH
Confidence 99999999999988765544
No 354
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.72 E-value=0.68 Score=43.83 Aligned_cols=140 Identities=17% Similarity=0.171 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC---chhhhhHHHHHHHHHHHHHh-CCC-ceEEEecC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG---SLENRCRFALEIVEAVSNEI-GAD-RVGIRLSP 258 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG---slenR~r~~~eii~avR~~v-g~~-~v~vrls~ 258 (399)
+..+.+++..++|+.||.|-.+-. .+|....|| .+-.... ..+-|++++++. +.+ .|.-|.-.
T Consensus 95 ~v~~~v~~l~~aGaagv~iED~~~-----------~k~cgH~gg~~k~l~p~~e-~~~rI~Aa~~a~~~~~~~i~aRtda 162 (295)
T 1s2w_A 95 NARRLVRKLEDRGVAGACLEDKLF-----------PKTNSLHDGRAQPLADIEE-FALKIKACKDSQTDPDFCIVARVEA 162 (295)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCC-------------------CTTCCBCCHHH-HHHHHHHHHHHCSSTTCEEEEEECT
T ss_pred HHHHHHHHHHHcCCcEEEECCCCC-----------CccccccCCCCCcccCHHH-HHHHHHHHHHhcccCCcEEEEeehH
Confidence 356677888899999999987641 344444453 2222222 244555555553 333 45556643
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCC-CCHHHHHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGG-YDREDGNKAI 335 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Gg-it~~~a~~~L 335 (399)
. .. ....+++++-++.++++|+|.|-+..+ .+..+.++.|.+.++ +|++++-. +.....+++-
T Consensus 163 ~--~a----~~g~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~ 228 (295)
T 1s2w_A 163 F--IA----GWGLDEALKRAEAYRNAGADAILMHSK--------KADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFR 228 (295)
T ss_dssp T--TT----TCCHHHHHHHHHHHHHTTCSEEEECCC--------SSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHH
T ss_pred H--hc----cccHHHHHHHHHHHHHcCCCEEEEcCC--------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHH
Confidence 1 11 123688999999999999998886421 123467778888887 89988732 2101245555
Q ss_pred HcCCCcEEEechHHh
Q 015862 336 AEGRADLVVYGRLFL 350 (399)
Q Consensus 336 ~~G~~D~V~~gR~~i 350 (399)
+-| +.+|.++-.++
T Consensus 229 ~lG-v~~v~~~~~~~ 242 (295)
T 1s2w_A 229 DMG-VSMVIWANHNL 242 (295)
T ss_dssp HHT-CCEEEECSHHH
T ss_pred HcC-CcEEEEChHHH
Confidence 667 99999986654
No 355
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=94.69 E-value=0.56 Score=44.32 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCC--C-chhhhhHHHHHHHHHHHHHh--CCCceEEEecC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYG--G-SLENRCRFALEIVEAVSNEI--GADRVGIRLSP 258 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yG--G-slenR~r~~~eii~avR~~v--g~~~v~vrls~ 258 (399)
+..+.+++..++|+.||.|-.+-+ .+|....| | .+..... ..+-|++++++. ++..|.-|.-.
T Consensus 91 ~~~~~v~~l~~aGa~gv~iED~~~-----------~k~cgH~~~~~k~l~p~~e-~~~kI~Aa~~a~~~~~~~i~aRtda 158 (290)
T 2hjp_A 91 NVHYVVPQYEAAGASAIVMEDKTF-----------PKDTSLRTDGRQELVRIEE-FQGKIAAATAARADRDFVVIARVEA 158 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCS-----------SCCC-------CCBCCHHH-HHHHHHHHHHHCSSTTSEEEEEECT
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCC-----------CccccccccCCCcccCHHH-HHHHHHHHHHhcccCCcEEEEeehH
Confidence 456777788889999999987642 34444444 2 2322222 245556665553 22245556643
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCC-CCHHHHHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGG-YDREDGNKAI 335 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Gg-it~~~a~~~L 335 (399)
. .. ....+++++-++.++++|+|.|-+..+ .+..+.++.|.+.++ +|++++-. +..-..+++-
T Consensus 159 ~--~a----~~g~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~ 224 (290)
T 2hjp_A 159 L--IA----GLGQQEAVRRGQAYEEAGADAILIHSR--------QKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIA 224 (290)
T ss_dssp T--TT----TCCHHHHHHHHHHHHHTTCSEEEECCC--------CSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHH
T ss_pred h--hc----cccHHHHHHHHHHHHHcCCcEEEeCCC--------CCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHH
Confidence 1 01 223788999999999999998886431 123457788999998 99887621 1111223333
Q ss_pred HcCCCcEEEechHHh
Q 015862 336 AEGRADLVVYGRLFL 350 (399)
Q Consensus 336 ~~G~~D~V~~gR~~i 350 (399)
+-|++.+|.++-.++
T Consensus 225 ~lG~v~~v~~~~~~~ 239 (290)
T 2hjp_A 225 ALSKVGIVIYGNHAI 239 (290)
T ss_dssp TCTTEEEEEECSHHH
T ss_pred hcCCeeEEEechHHH
Confidence 444488999876655
No 356
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.69 E-value=0.18 Score=46.80 Aligned_cols=80 Identities=18% Similarity=0.043 Sum_probs=61.9
Q ss_pred HHHHHHHhhhhhCceEEEEeC-CCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 015862 273 LGLYMAESLNKYGILYCHMVE-PRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~-~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~i 350 (399)
+..++++..++.|++.|++.. ..+. ......++.+++.+++||..-+.+ ++.+...+++.| +|.|.++-..+
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f-----~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~G-AD~VlL~~~~l 139 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRF-----GGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFG-ASAALLIVALL 139 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSS-----CCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT-CSEEEEEHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhh-----ccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcC-CCEEEECccch
Confidence 356789999999999999842 1111 113567888999999999988877 888999999998 99999999988
Q ss_pred hCCcHHHHHH
Q 015862 351 ANPDLPRRFE 360 (399)
Q Consensus 351 adPdl~~k~~ 360 (399)
. +..+++.
T Consensus 140 ~--~~l~~l~ 147 (254)
T 1vc4_A 140 G--ELTGAYL 147 (254)
T ss_dssp G--GGHHHHH
T ss_pred H--HHHHHHH
Confidence 7 5555543
No 357
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=94.68 E-value=0.074 Score=51.12 Aligned_cols=105 Identities=15% Similarity=0.063 Sum_probs=66.9
Q ss_pred HHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCcccCCCCCCCh
Q 015862 192 AIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNP 270 (399)
Q Consensus 192 a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~~~~~~~~~ 270 (399)
+...||..++|..+. ..| .+.+++||+. |++ .|.|..|. ..+
T Consensus 141 ~~~~~~~~~Kik~g~--------------~~d-------------~~~v~~vr~~-g~d~~l~vDaN~---------~w~ 183 (329)
T 4gfi_A 141 AENAGRPLLKIKTGT--------------ADD-------------EARLRAVRAA-APEARIIIDANE---------GWN 183 (329)
T ss_dssp HHTTTSSEEEEECCS--------------SCC-------------HHHHHHHHHH-CTTSEEEEECTT---------CCC
T ss_pred HhhccccEEEecCCc--------------ccH-------------HHHHHHHHHh-ccCCeEEEEcCC---------CCC
Confidence 345899999998653 122 5677788875 655 45555443 224
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.+++.++++.|++.++.|++ +|... .+....++...++|+.+...+ +.+++...+ +.+|+|.+
T Consensus 184 ~~~A~~~~~~l~~~~i~~iE--qP~~~--------~~~~~~~~~~~~ipia~dEs~~~~~d~~~~~--~a~d~i~~ 247 (329)
T 4gfi_A 184 DDNIEYYLKLAAELKISLIE--QPLPA--------GKDAMLARIEHPVLICADESVHSTEDLAGLR--DRYDAINI 247 (329)
T ss_dssp TTTHHHHHHHHHHTTCCEEE--CCSCT--------TSCGGGGGSCCSSEEEESTTCCTGGGSGGGT--TTCSEEEE
T ss_pred HHHHHHHHHhhhhcCceEEE--ecCCC--------ccHHHHHHhcCCCCchhccCCCCHHHHHHHh--hccCeEEe
Confidence 56789999999999999988 55311 111223445567788777777 777765533 44776554
No 358
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=94.68 E-value=0.42 Score=45.75 Aligned_cols=105 Identities=12% Similarity=0.036 Sum_probs=66.1
Q ss_pred ccCCCCCCCCc--hhhhhHHH---HHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 218 VNDRTDQYGGS--LENRCRFA---LEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 218 ~N~R~D~yGGs--lenR~r~~---~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
.|+|.+-+-+- .+|-..+. .+-++++|+..+..+|.|-+. +.++..+. .++|+|+|-+.
T Consensus 195 ~nHR~gL~d~vlikdnHi~~~G~i~~Av~~ar~~~p~~kIeVEVd------------tldea~eA----l~aGaD~I~LD 258 (320)
T 3paj_A 195 YNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETE------------TLAELEEA----ISAGADIIMLD 258 (320)
T ss_dssp BCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSTTSCEEEEES------------SHHHHHHH----HHTTCSEEEEE
T ss_pred cceecccchhhccHHHHHHHhCCHHHHHHHHHHhCCCCeEEEEEC------------CHHHHHHH----HHcCCCEEEEC
Confidence 35666554432 23444433 466777777766434555332 23443322 24699998875
Q ss_pred CCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
.. .++.++++.+.+ ++++.++||+|++.+.++.+.| +|++++|.-.
T Consensus 259 n~----------~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tG-VD~isvGalt 306 (320)
T 3paj_A 259 NF----------SLEMMREAVKINAGRAALENSGNITLDNLKECAETG-VDYISVGALT 306 (320)
T ss_dssp SC----------CHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTTT-CSEEECTHHH
T ss_pred CC----------CHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEECcee
Confidence 42 223444444444 4779999999999999999988 9999999843
No 359
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.67 E-value=0.12 Score=49.48 Aligned_cols=129 Identities=13% Similarity=0.030 Sum_probs=79.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++..+++.+.. .-+
T Consensus 29 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v~~~~v~~~~g---rvp 83 (316)
T 3e96_A 29 SIDWHHYKETVDRI-------VDNGIDVIVPCGNTSE----FY-----------ALSLEEAKEEVRRTVEYVHG---RAL 83 (316)
T ss_dssp CBCHHHHHHHHHHH-------HTTTCCEECTTSGGGT----GG-----------GSCHHHHHHHHHHHHHHHTT---SSE
T ss_pred CCCHHHHHHHHHHH-------HHcCCCEEEeCccccC----cc-----------cCCHHHHHHHHHHHHHHhCC---CCc
Confidence 35555555555554 5699999998766541 11 12466776665555554432 225
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEE-e-CC-CCH
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLV-A-GG-YDR 328 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-Gg-it~ 328 (399)
|.+=++ . +..+++++++..++.|+|.+-+..|.+..+ .......+.+.|-+++++||+. + |. +++
T Consensus 84 ViaGvg----------~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~g~~l~~ 151 (316)
T 3e96_A 84 VVAGIG----------Y-ATSTAIELGNAAKAAGADAVMIHMPIHPYV-TAGGVYAYFRDIIEALDFPSLVYFKDPEISD 151 (316)
T ss_dssp EEEEEC----------S-SHHHHHHHHHHHHHHTCSEEEECCCCCSCC-CHHHHHHHHHHHHHHHTSCEEEEECCTTSCT
T ss_pred EEEEeC----------c-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCCCCCCH
Confidence 544332 2 467789999999999999998876654321 1111234566777888999654 3 32 488
Q ss_pred HHHHHHHHc
Q 015862 329 EDGNKAIAE 337 (399)
Q Consensus 329 ~~a~~~L~~ 337 (399)
+...++.+-
T Consensus 152 ~~~~~La~~ 160 (316)
T 3e96_A 152 RVLVDLAPL 160 (316)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHcC
Confidence 887777643
No 360
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.64 E-value=0.32 Score=46.21 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHH---hCCC-ceEEEecC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNE---IGAD-RVGIRLSP 258 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~---vg~~-~v~vrls~ 258 (399)
+..+.+++.+++|+.||.|-... ..+|....+| .+-..-.+ .+-|++.|++ .+++ .|.-|.-.
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~-----------~~Krcgh~~gk~l~~~~e~-~~rI~Aa~~A~~~~~~d~~I~ARTDa 163 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQV-----------QTKRCGHLAGKILVDTDTY-VTRIRAAVQARQRIGSDIVVIARTDS 163 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBC-----------CC-------CCCBCCHHHH-HHHHHHHHHHHHHHTCCCEEEEEECC
T ss_pred HHHHHHHHHHHcCCcEEEECCCC-----------CCcccCCCCCCeecCHHHH-HHHHHHHHHHHHhcCCCEEEEEEecc
Confidence 35677788889999999998653 1244443333 33333333 3334444443 3666 47778865
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEe---CCCCH-HHHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVA---GGYDR-EDGNK 333 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~---Ggit~-~~a~~ 333 (399)
.. ....+++++-++...++|+|.|-+... ...+.++.+.+.++ .|+.+| ++-+| -..++
T Consensus 164 ~~-------~~gldeAi~Ra~ay~eAGAD~ifi~g~---------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~e 227 (302)
T 3fa4_A 164 LQ-------THGYEESVARLRAARDAGADVGFLEGI---------TSREMARQVIQDLAGWPLLLNMVEHGATPSISAAE 227 (302)
T ss_dssp HH-------HHCHHHHHHHHHHHHTTTCSEEEETTC---------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHH
T ss_pred cc-------cCCHHHHHHHHHHHHHcCCCEEeecCC---------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHH
Confidence 21 124788999999999999999876432 12346677777774 787664 22122 12344
Q ss_pred HHHcCCCcEEEechHHh
Q 015862 334 AIAEGRADLVVYGRLFL 350 (399)
Q Consensus 334 ~L~~G~~D~V~~gR~~i 350 (399)
+-+-| +.+|..+-.++
T Consensus 228 L~~lG-v~~v~~~~~~~ 243 (302)
T 3fa4_A 228 AKEMG-FRIIIFPFAAL 243 (302)
T ss_dssp HHHHT-CSEEEETTTTH
T ss_pred HHHcC-CCEEEEchHHH
Confidence 44456 88999875544
No 361
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=94.47 E-value=0.23 Score=49.83 Aligned_cols=68 Identities=12% Similarity=0.041 Sum_probs=51.1
Q ss_pred hHHHHH-HHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC--CHHHHHHHHHcCCCcEEEe
Q 015862 270 PEALGL-YMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY--DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 270 ~~~~~~-~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~ 345 (399)
+.++++ .+++.++++++.||+ +|. ....++..+.+++..++||++...+ +++++.++|+.+.||.|.+
T Consensus 274 t~~eai~~~~~~l~~y~i~~iE--dPl------~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~i 344 (436)
T 2al1_A 274 TGPQLADLYHSLMKRYPIVSIE--DPF------AEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLL 344 (436)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--CCS------CTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCcEEEE--CCC------CCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEe
Confidence 445555 457778889988887 542 2235677788988888999755554 5999999999999999876
No 362
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.40 E-value=0.13 Score=47.93 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE--ecCCc-
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR--LSPFA- 260 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr--ls~~~- 260 (399)
+-++.|.+..++|+++|.|-.+. -..+.|+++.++ |. ||.-- |.|-.
T Consensus 95 ~a~~~a~rl~kaGa~aVklEgg~----------------------------e~~~~I~al~~a-gi-pV~gHiGLtPq~v 144 (264)
T 1m3u_A 95 QAFENAATVMRAGANMVKIEGGE----------------------------WLVETVQMLTER-AV-PVCGHLGLTPQSV 144 (264)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGGH
T ss_pred HHHHHHHHHHHcCCCEEEECCcH----------------------------HHHHHHHHHHHC-CC-CeEeeecCCceee
Confidence 34666777778999999988541 124455555443 21 44322 22211
Q ss_pred ----ccCCCCCC-ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC
Q 015862 261 ----NYMESGDS-NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG 325 (399)
Q Consensus 261 ----~~~~~~~~-~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 325 (399)
+|.-.+.. ...++.++-++.++++|++.|-+... + .+.++.|.+.+++|+|+.|.
T Consensus 145 ~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~v---------p-~~~a~~it~~l~iP~igIGa 204 (264)
T 1m3u_A 145 NIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECV---------P-VELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp HHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESC---------C-HHHHHHHHHHCSSCEEEESS
T ss_pred cccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecC---------C-HHHHHHHHHhCCCCEEEeCC
Confidence 11111111 12466778888999999998876321 1 25778899999999988764
No 363
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.38 E-value=0.1 Score=49.73 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=81.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.++.+.+.++++. ..+.|.|||-+.+.-|- |.+ =|.+.|.+ +++.++++++..
T Consensus 31 ~iD~~~l~~lv~~-------li~~Gv~Gl~v~GtTGE----~~~-----------Ls~~Er~~----v~~~~~~~~~gr~ 84 (307)
T 3s5o_A 31 EVDYGKLEENLHK-------LGTFPFRGFVVQGSNGE----FPF-----------LTSSERLE----VVSRVRQAMPKNR 84 (307)
T ss_dssp CBCHHHHHHHHHH-------HTTSCCSEEEESSGGGT----GGG-----------SCHHHHHH----HHHHHHHTSCTTS
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEECccccc----hhh-----------CCHHHHHH----HHHHHHHHcCCCC
Confidence 3555555555554 46799999998876641 111 14566654 455555555433
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc-cccCCCchhhHHHHhhcCCcEEEeC-----
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR-EEKSECPHSLLPMRKAFKGTFLVAG----- 324 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~G----- 324 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+..+ ........+.+.|.+++++||+.-.
T Consensus 85 pviaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~t 154 (307)
T 3s5o_A 85 LLLAGSG----------CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANT 154 (307)
T ss_dssp EEEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred cEEEecC----------CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCccc
Confidence 5655333 33567799999999999999998877765421 1111123456677788889965322
Q ss_pred C--CCHHHHHHHHHc
Q 015862 325 G--YDREDGNKAIAE 337 (399)
Q Consensus 325 g--it~~~a~~~L~~ 337 (399)
+ ++++...++.+.
T Consensus 155 g~~l~~~~~~~La~~ 169 (307)
T 3s5o_A 155 GLDLPVDAVVTLSQH 169 (307)
T ss_dssp SCCCCHHHHHHHHTS
T ss_pred CCCCCHHHHHHHhcC
Confidence 2 478888777643
No 364
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=94.32 E-value=0.28 Score=49.13 Aligned_cols=68 Identities=7% Similarity=0.072 Sum_probs=50.6
Q ss_pred hHHH-HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC--CHHHHHHHHHcCCCcEEEe
Q 015862 270 PEAL-GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY--DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 270 ~~~~-~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~ 345 (399)
+.++ ...+++.++++++.||+ +|. ....++..+.+++..++||++...+ +++++.++|+.+.||+|-+
T Consensus 271 t~~e~~~~~~~ll~~y~i~~IE--dPl------~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~i 341 (439)
T 2akz_A 271 TGDQLGALYQDFVRDYPVVSIE--DPF------DQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLL 341 (439)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--CCS------CTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEe
Confidence 3444 34557778889988877 552 2235667788998888999755544 6999999999999999876
No 365
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=94.24 E-value=1.9 Score=42.50 Aligned_cols=171 Identities=11% Similarity=0.050 Sum_probs=89.7
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCC-CccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVG-RVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVND 184 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~G-r~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~ 184 (399)
.+.+.+++++++++|-++++.+ |.+ ..+.|..+ ..|. . . ..++.+++.+-+.+
T Consensus 88 ~~~~~~~a~~Ak~~GLkVlldf-HysD~WadPg~Q------~~P~----a------------W---~~~~~~~l~~~~~~ 141 (399)
T 1ur4_A 88 LEKAIQIGKRATANGMKLLADF-HYSDFWADPAKQ------KAPK----A------------W---ANLNFEDKKTALYQ 141 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE-CSSSSCCSSSCC------CCCG----G------------G---TTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-ccCCccCCcccc------cCcc----c------------c---ccCCHHHHHHHHHH
Confidence 5688889999999999999997 532 12211100 0010 0 0 12566677666666
Q ss_pred HHHHH-HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 185 FRLAA-RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 185 f~~aA-~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
|...+ .++++.|.+---|..||- +-..|+. +...++..+|+.+.+++||+..+.-.|.+-+...
T Consensus 142 yt~~~l~~l~~~g~~~~~vqvGNE-i~~g~~~----------~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~---- 206 (399)
T 1ur4_A 142 YTKQSLKAMKAAGIDIGMVQVGNE-TNGGLAG----------ETDWAKMSQLFNAGSQAVRETDSNILVALHFTNP---- 206 (399)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESSS-CSSCBTT----------BCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCT----
T ss_pred HHHHHHHHHHhcCCCCcEEEEccc-cccccCC----------cccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCC----
Confidence 65554 445556654333333442 0000110 1246788999999999999987533465544321
Q ss_pred CCCCCChHHHHHHHHHhhhhhC--ceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe
Q 015862 264 ESGDSNPEALGLYMAESLNKYG--ILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA 323 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~G--vd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~ 323 (399)
.. .+....+...|...| +|+|-++--.++.. ........++.+.+..+.||+.+
T Consensus 207 ---~~--~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~-~l~~l~~~l~~l~~rygKpV~v~ 262 (399)
T 1ur4_A 207 ---ET--SGRYAWIAETLHRHHVDYDVFASSYYPFWHG-TLKNLTSVLTSVADTYGKKVMVA 262 (399)
T ss_dssp ---TS--TTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-CHHHHHHHHHHHHHHHCCEEEEE
T ss_pred ---cc--hHHHHHHHHHHHHcCCCcCeEeEecCccchh-hHHHHHHHHHHHHHHhCCcEEEE
Confidence 11 122334455565566 66666552111100 00001123455655678887755
No 366
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.20 E-value=0.2 Score=47.19 Aligned_cols=116 Identities=15% Similarity=0.144 Sum_probs=71.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++. |.+=++
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~g--vi~Gvg-------- 72 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGL----GP-----------ALSLQEKMEL----TDAATSAARR--VIVQVA-------- 72 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTT----GG-----------GSCHHHHHHH----HHHHHHHCSS--EEEECC--------
T ss_pred HHHHHHHHHCCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCC--EEEeeC--------
Confidence 33334446789999998876541 11 1245666544 4445555543 333222
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhcCCcEEE-e-----C-CCCHHHHHH
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAFKGTFLV-A-----G-GYDREDGNK 333 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~-~-----G-git~~~a~~ 333 (399)
..+..+++++++..++.|+|.+-+..|.+.. +. ......+.+.|-+++++||+. + | .++++...+
T Consensus 73 --~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 73 --SLNADEAIALAKYAESRGAEAVASLPPYYFPRLS-ERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp --CSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred --CCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCC-HHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 3356779999999999999999887775543 21 111234556777888999664 2 3 247887766
No 367
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=94.19 E-value=0.14 Score=51.65 Aligned_cols=141 Identities=16% Similarity=0.039 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEE
Q 015862 176 DEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGI 254 (399)
Q Consensus 176 ~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~v 254 (399)
.||...+..|++++.. +.|+|.|-+|+..| .+.+++..+..+.. .|.+
T Consensus 87 ~DIpnT~~~~a~~~~~--~lg~d~vTvh~~~G-----------------------------~~~l~~~~~~~~~~v~vL~ 135 (453)
T 3qw4_B 87 GDIADTADAYATSAFK--HLNAHAITASPYMG-----------------------------SDSLQPFMRYPDKAVFVLC 135 (453)
T ss_dssp CCCHHHHHHHHHHHHT--TSCCSEEEECSTTC-----------------------------HHHHHHHHTCTTSEEEEEE
T ss_pred CChHHHHHHHHHHHHH--HcCCCEEEEcccCC-----------------------------HHHHHHHHHhhCCcEEEEE
Confidence 3566666666655432 48999999996543 23334333333333 5777
Q ss_pred EecCCc--ccCCCCC--CChHHHHHHHHH-hhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeC-CC-
Q 015862 255 RLSPFA--NYMESGD--SNPEALGLYMAE-SLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAG-GY- 326 (399)
Q Consensus 255 rls~~~--~~~~~~~--~~~~~~~~~l~~-~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G-gi- 326 (399)
++|-.+ ++...+. ....+...++++ ...+.|.+-+-++.. ..+-++.||+.++ .++++=| |.
T Consensus 136 ~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~gat----------~~~e~~~ir~~~~~~~~l~PGig~q 205 (453)
T 3qw4_B 136 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGAT----------DPVALARVRARAPTLWFLVPGIGAQ 205 (453)
T ss_dssp ECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEECTT----------CHHHHHHHHHHCSSCCEEECCSSTT
T ss_pred eCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEECCC----------CHHHHHHHHHhCCCCeEEECCcCCC
Confidence 887532 2322211 112344455555 555568777765422 1245677888875 4554434 22
Q ss_pred --CHHHHHHHHH--cCCCcEEEechHHhhCCcHHH
Q 015862 327 --DREDGNKAIA--EGRADLVVYGRLFLANPDLPR 357 (399)
Q Consensus 327 --t~~~a~~~L~--~G~~D~V~~gR~~iadPdl~~ 357 (399)
||++|.+.-. +|.-.++.+||+++.-+|..+
T Consensus 206 g~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~ 240 (453)
T 3qw4_B 206 GGSLKASLDAGLRADGSGMLINVSRGLARAADPRA 240 (453)
T ss_dssp CCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHH
T ss_pred CCCHHHHHHhcCCcccCCceEecChhhccCCCHHH
Confidence 5665544322 122334999999998887643
No 368
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.11 E-value=0.08 Score=51.75 Aligned_cols=69 Identities=16% Similarity=0.162 Sum_probs=50.7
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
+..+.++.+.++|+|+|.++... .. ....++.++.+|+.+ ++||++.+-.|+++|+.+++.| +|+|.++
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~-G~---~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAH-AH---AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSC-CS---SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC-CC---cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcC-CCEEEEc
Confidence 35678889999999999885431 10 011346788899987 5777764334999999999998 9999873
No 369
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.06 E-value=0.26 Score=47.08 Aligned_cols=149 Identities=9% Similarity=0.068 Sum_probs=90.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+++ +.++++++..
T Consensus 24 ~iD~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~~Er~~v~----~~~~~~~~grv 77 (311)
T 3h5d_A 24 SINFDAIPALIEHL-------LAHHTDGILLAGTTAE----SP-----------TLTHDEELELF----AAVQKVVNGRV 77 (311)
T ss_dssp SBCTTHHHHHHHHH-------HHTTCCCEEESSTTTT----GG-----------GSCHHHHHHHH----HHHHHHSCSSS
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHHHH----HHHHHHhCCCC
Confidence 35556666666554 5799999998876641 11 12456666544 4455555433
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCc-eEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe------
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI-LYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA------ 323 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gv-d~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------ 323 (399)
+|.+=++ ..+..+++++++..++.|. |.+-+..|.+..+. ......+.+.|.+++++||+.-
T Consensus 78 pViaGvg----------~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~t 146 (311)
T 3h5d_A 78 PLIAGVG----------TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPS-QEGMYQHFKAIADASDLPIIIYNIPGRV 146 (311)
T ss_dssp CEEEECC----------CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCC-HHHHHHHHHHHHHSCSSCEEEEECHHHH
T ss_pred cEEEeCC----------CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCC-HHHHHHHHHHHHHhCCCCEEEEeccccc
Confidence 6665333 2356779999999999986 99988777654321 1112345667778889996643
Q ss_pred CC-CCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 324 GG-YDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 324 Gg-it~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
|. ++++...++.+.. -+|++==.. |.+...++++
T Consensus 147 g~~l~~~~~~~La~~p--nIvgiKdss--d~~~~~~~~~ 181 (311)
T 3h5d_A 147 VVELTPETMLRLADHP--NIIGVKECT--SLANMAYLIE 181 (311)
T ss_dssp SSCCCHHHHHHHHTST--TEEEEEECS--CHHHHHHHHH
T ss_pred CCCCCHHHHHHHhcCC--CEEEEEeCC--CHHHHHHHHH
Confidence 32 4888888777543 244442222 5455555544
No 370
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.04 E-value=0.53 Score=44.80 Aligned_cols=154 Identities=14% Similarity=0.051 Sum_probs=90.2
Q ss_pred HHHHHHHHHhCCCEEEEcc-ccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHG-AHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~-~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+ +.+.-+ =..|--.=+++.. +..+++|.+.+. -||.+.+--
T Consensus 39 ~~sA~l~e~aG~dai~vs~~s~a~~~---------G~pD~~~vt~~em----~~~~~~I~r~~~-~pviaD~d~------ 98 (305)
T 3ih1_A 39 AMAALVARNTGFLALYLSGAAYTASK---------GLPDLGIVTSTEV----AERARDLVRATD-LPVLVDIDT------ 98 (305)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHHHH---------TCCSSSCSCHHHH----HHHHHHHHHHHC-CCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHHhC---------CCCCCCcCCHHHH----HHHHHHHHHhcC-CCEEEECCC------
Confidence 5678889999999999875 222110 1122111134433 445556666653 377776532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc----cc--cCCCchhhHHHHhhc--CCcEEEeCCC-C--------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR----EE--KSECPHSLLPMRKAF--KGTFLVAGGY-D-------- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~----~~--~~~~~~~~~~ir~~~--~~pvi~~Ggi-t-------- 327 (399)
|.++ .+...+.++.++++|++.+++-....... .. -.+..+.+.+|+.++ +.+++.+++. .
T Consensus 99 -Gyg~-~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 99 -GFGG-VLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDE 176 (305)
T ss_dssp -CSSS-HHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHH
T ss_pred -CCCC-HHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHH
Confidence 1233 45678889999999999999865432110 00 011223455554443 5665556554 2
Q ss_pred -HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 -REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 -~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
.+.+..+.+.| +|.|.+ ..+.+++..+++.+..+
T Consensus 177 ai~Ra~ay~eAG-AD~i~~--e~~~~~~~~~~i~~~~~ 211 (305)
T 3ih1_A 177 AIERANAYVKAG-ADAIFP--EALQSEEEFRLFNSKVN 211 (305)
T ss_dssp HHHHHHHHHHHT-CSEEEE--TTCCSHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC-CCEEEE--cCCCCHHHHHHHHHHcC
Confidence 24566677788 999998 34567788888877644
No 371
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=94.03 E-value=0.096 Score=47.45 Aligned_cols=76 Identities=17% Similarity=0.263 Sum_probs=55.4
Q ss_pred HHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHH--HHHHHHHcCCCcEEEechHHh
Q 015862 273 LGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDRE--DGNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~--~a~~~L~~G~~D~V~~gR~~i 350 (399)
....+++...++|++.+-++.. .++-++.||+.++..++.++|+.++ +..++++.| +|++.+||+++
T Consensus 116 ~v~~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~~~G-ad~iVvGr~I~ 184 (215)
T 3ve9_A 116 FYPYLREVARRVNPKGFVAPAT----------RPSMISRVKGDFPDKLVISPGVGTQGAKPGIALCHG-ADYEIVGRSVY 184 (215)
T ss_dssp GHHHHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHHHTT-CSEEEECHHHH
T ss_pred HHHHHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHHHcC-CCEEEeCHHHc
Confidence 3566777778889886654321 2345677898886667778998655 667888888 99999999999
Q ss_pred hCCcHHHHH
Q 015862 351 ANPDLPRRF 359 (399)
Q Consensus 351 adPdl~~k~ 359 (399)
..+|....+
T Consensus 185 ~a~dp~~a~ 193 (215)
T 3ve9_A 185 QSADPVRKL 193 (215)
T ss_dssp TSSSHHHHH
T ss_pred CCCCHHHHH
Confidence 877765443
No 372
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.91 E-value=0.24 Score=46.61 Aligned_cols=46 Identities=9% Similarity=-0.032 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG 325 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 325 (399)
..++.++-++.++++|++.|-+... + .+.++.|.+.+++|+|+.|.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~v---------p-~~~a~~it~~l~iP~igIGa 222 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEMV---------P-AELATQITGKLTIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESC---------C-HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecC---------C-HHHHHHHHHhCCCCEEEeCC
Confidence 4466788889999999998876321 1 25778899999999988764
No 373
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.79 E-value=4.2 Score=37.65 Aligned_cols=89 Identities=17% Similarity=0.013 Sum_probs=57.2
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCC---cccccccCCCchhhHHHHhhcCCcEEEeCCC-
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPR---MKTREEKSECPHSLLPMRKAFKGTFLVAGGY- 326 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~---~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi- 326 (399)
||.++-+. ..++++....++.+...|...+++..+. +........++..+..+|+.++.||++--.-
T Consensus 132 PV~lk~G~---------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~ 202 (262)
T 1zco_A 132 PVLLKRGM---------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHP 202 (262)
T ss_dssp CEEEECCT---------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTT
T ss_pred cEEEecCC---------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCC
Confidence 88887654 2257778888888888887656654432 2211112224456778999888998654332
Q ss_pred -C-----HHHHHHHHHcCCCcEEEechHH
Q 015862 327 -D-----REDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 327 -t-----~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
. +..+..++..| +|.|++-+-+
T Consensus 203 ~g~~~~v~~~~~aAva~G-a~Gl~iE~H~ 230 (262)
T 1zco_A 203 AGRRSLVIPLAKAAYAIG-ADGIMVEVHP 230 (262)
T ss_dssp TCSGGGHHHHHHHHHHTT-CSEEEEEBCS
T ss_pred CCccchHHHHHHHHHHcC-CCEEEEEecC
Confidence 2 25577788888 9988887654
No 374
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.77 E-value=0.21 Score=44.47 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=57.3
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEE-EeCCC-CHHHHHHHHHcCCCcEEEech
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFL-VAGGY-DREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi-~~Ggi-t~~~a~~~L~~G~~D~V~~gR 347 (399)
+.++..+.++.+.+.|+++|++.... ......++.+++.++++++ +.|.+ +.++++.+++.| +|+|.++-
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~G-ad~V~~~~ 88 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNS-------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMG-CQLIVTPN 88 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTS-------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTT-CCEEECSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcC-CCEEEeCC
Confidence 45678889999999999999986442 1123456667777777754 44556 899999999998 99998764
Q ss_pred HHhhCCcHHHHHH
Q 015862 348 LFLANPDLPRRFE 360 (399)
Q Consensus 348 ~~iadPdl~~k~~ 360 (399)
.++++.+..+
T Consensus 89 ---~~~~~~~~~~ 98 (212)
T 2v82_A 89 ---IHSEVIRRAV 98 (212)
T ss_dssp ---CCHHHHHHHH
T ss_pred ---CCHHHHHHHH
Confidence 3556665544
No 375
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=93.77 E-value=0.2 Score=47.41 Aligned_cols=123 Identities=13% Similarity=0.151 Sum_probs=76.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|. ++++.++++++.
T Consensus 16 ~iD~~~l~~lv~~l-------i~~Gv~gl~~~GttGE----~~-----------~Ls~eEr~----~v~~~~~~~~~g-- 67 (293)
T 1w3i_A 16 RIDKEKLKIHAENL-------IRKGIDKLFVNGTTGL----GP-----------SLSPEEKL----ENLKAVYDVTNK-- 67 (293)
T ss_dssp SBCHHHHHHHHHHH-------HHTTCCEEEESSTTTT----GG-----------GSCHHHHH----HHHHHHHTTCSC--
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHH----HHHHHHHHHcCC--
Confidence 35555555555544 6789999998876541 11 12455665 445555555543
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhcCCcEEE-e-----C
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAFKGTFLV-A-----G 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 324 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+.. +. ......+.+.|-+++++||+. + |
T Consensus 68 viaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg 136 (293)
T 1w3i_A 68 IIFQVG----------GLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMS-EKHLVKYFKTLCEVSPHPVYLYNYPTATG 136 (293)
T ss_dssp EEEECC----------CSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCC-HHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred EEEecC----------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC-HHHHHHHHHHHHhhCCCCEEEEECchhhC
Confidence 333222 3356779999999999999999888776543 21 111234556777888899664 2 3
Q ss_pred -CCCHHHHHH
Q 015862 325 -GYDREDGNK 333 (399)
Q Consensus 325 -git~~~a~~ 333 (399)
.++++...+
T Consensus 137 ~~l~~~~~~~ 146 (293)
T 1w3i_A 137 KDIDAKVAKE 146 (293)
T ss_dssp CCCCHHHHHH
T ss_pred cCCCHHHHHh
Confidence 247887766
No 376
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=93.72 E-value=4.8 Score=39.03 Aligned_cols=144 Identities=17% Similarity=0.084 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE
Q 015862 176 DEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR 255 (399)
Q Consensus 176 ~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr 255 (399)
+.|+..++.-.+..+.+.++||+-|-|.+.|- ++|...+...++++..++. |- .|-.-
T Consensus 115 ~~i~~~i~a~~~~~~~~~~~GFtSVMiDgS~l--------------------p~eENI~~Tk~vv~~ah~~-gv-sVEaE 172 (357)
T 3qm3_A 115 PWIDGLIEANAQYKKTHGQALFSSHMLDLSEE--------------------SLEENLSTCEVYLQKLDAL-GV-ALEIE 172 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCSEEECCCTTS--------------------CHHHHHHHHHHHHHHHHHH-TC-EEEEE
T ss_pred HHHHHHHHHhHHHHhhhcCCCCCEEEEeCCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence 44555555444445677788999999997761 5788899999999999774 21 23332
Q ss_pred ec---CCcccCC------CCCCChHHHHHHHHHhhhhh-CceEEEEeCCCcccccc-cCC--CchhhHHHHh----hc--
Q 015862 256 LS---PFANYME------SGDSNPEALGLYMAESLNKY-GILYCHMVEPRMKTREE-KSE--CPHSLLPMRK----AF-- 316 (399)
Q Consensus 256 ls---~~~~~~~------~~~~~~~~~~~~l~~~Le~~-Gvd~l~v~~~~~~~~~~-~~~--~~~~~~~ir~----~~-- 316 (399)
|. ..++... .....+.+++.++++.+-.. |+|+|-++-++....|. ..+ ..+.++.|++ .+
T Consensus 173 LG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~ 252 (357)
T 3qm3_A 173 LGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFAL 252 (357)
T ss_dssp CCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTC
T ss_pred eeeeccccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 22 2221100 01123567788888766322 57899887776443332 222 3445665544 33
Q ss_pred ----CCcEEEeCC--CCHHHHHHHHHcCCCc
Q 015862 317 ----KGTFLVAGG--YDREDGNKAIAEGRAD 341 (399)
Q Consensus 317 ----~~pvi~~Gg--it~~~a~~~L~~G~~D 341 (399)
++|++.=|+ ++.++..++++.|.+-
T Consensus 253 ~~~~~vpLVlHGgSG~p~e~i~~ai~~GV~K 283 (357)
T 3qm3_A 253 NSDKPINFVFHGGSGSELKDIKNAVSYGVIK 283 (357)
T ss_dssp SCSCCSCEEECSCTTCCHHHHHHHHHTTEEE
T ss_pred ccCCCCcEEEeCCCCCCHHHHHHHHHCCceE
Confidence 688776654 5788999999999543
No 377
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.71 E-value=2.7 Score=39.79 Aligned_cols=133 Identities=18% Similarity=0.180 Sum_probs=83.6
Q ss_pred HHHHHHh--------CCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe---c
Q 015862 189 ARNAIEA--------GFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL---S 257 (399)
Q Consensus 189 A~~a~~a--------GfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl---s 257 (399)
.++|.++ ||+-|-|.+.|- ++|...+...++++..++. |- .|-.-| .
T Consensus 98 i~~ai~~~~~~~~~~GFtSVMiDgS~~--------------------p~eENi~~Tk~vv~~ah~~-gv-sVEaElG~ig 155 (306)
T 3pm6_A 98 IKRAADLSRSETHEPGFDSIMVDMSHF--------------------SKEENLRLTRELVAYCNAR-GI-ATEAEPGRIE 155 (306)
T ss_dssp HHHHHHTC------CCCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHTT-TC-EEEECSSBCC
T ss_pred HHHHHHhhhhccCCCCCCEEEEeCCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeec
Confidence 3555556 999999987761 4788899999999988764 21 122222 2
Q ss_pred CCcccC-CC----CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc-cCC--CchhhHHHHhhc--CCcEEEeCC--
Q 015862 258 PFANYM-ES----GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE-KSE--CPHSLLPMRKAF--KGTFLVAGG-- 325 (399)
Q Consensus 258 ~~~~~~-~~----~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~-~~~--~~~~~~~ir~~~--~~pvi~~Gg-- 325 (399)
..++.. .. ....+.+++.+++ +.|+|+|-+.-++....|. ..+ ..+.++.|++.+ ++|++.=|+
T Consensus 156 G~Edgv~~~~~~~~~yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG 231 (306)
T 3pm6_A 156 GGEDGVQDTVDLEGVLTTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADP 231 (306)
T ss_dssp CCBTTBCCCTTCCCBCCCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTT
T ss_pred cccCCccccccccccCCCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCC
Confidence 222111 00 1123466677666 4899999887666433332 122 345688899998 699776665
Q ss_pred CCHHHHHHHHHcCCCcEEEechH
Q 015862 326 YDREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 326 it~~~a~~~L~~G~~D~V~~gR~ 348 (399)
++.++..++++.|.+- |=++..
T Consensus 232 ~p~e~i~~ai~~GV~K-iNi~Td 253 (306)
T 3pm6_A 232 FTKEIFEKCIERGVAK-VNVNRA 253 (306)
T ss_dssp CCHHHHHHHHHTTEEE-EEESHH
T ss_pred CCHHHHHHHHHcCCeE-EEeChH
Confidence 4788899999999443 444443
No 378
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=93.69 E-value=5.4 Score=38.64 Aligned_cols=141 Identities=13% Similarity=0.051 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe
Q 015862 177 EIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL 256 (399)
Q Consensus 177 eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl 256 (399)
.|+.+++.-.+..+.+.++||.-|-|.+.| =++|...+...++++..++. |- .|-.-|
T Consensus 118 ~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~--------------------~p~eENI~~Tkevv~~ah~~-gv-sVEaEL 175 (358)
T 1dos_A 118 WIDGLLDAGEKHFAATGKPLFSSHMIDLSE--------------------ESLQENIEICSKYLERMSKI-GM-TLEIEL 175 (358)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEC
T ss_pred HHHHHHHHHHHHHHhcccCCCceEeecCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEe
Confidence 344444333233344445679999999776 15788899999999998764 21 233333
Q ss_pred c---CCcccCCC------CCCChHHHHHHHHHhhhhhCce---EEEEeCCCcccccc-cCC--CchhhHHHHhh------
Q 015862 257 S---PFANYMES------GDSNPEALGLYMAESLNKYGIL---YCHMVEPRMKTREE-KSE--CPHSLLPMRKA------ 315 (399)
Q Consensus 257 s---~~~~~~~~------~~~~~~~~~~~l~~~Le~~Gvd---~l~v~~~~~~~~~~-~~~--~~~~~~~ir~~------ 315 (399)
. ..++.... ....+.+++.++++.+ .||| .|-++-++....|. ..+ ..+.++.|++.
T Consensus 176 G~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~t--tgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g 253 (358)
T 1dos_A 176 GCTGGEEDGVDNSHMDASALYTQPEDVDYAYTEL--SKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHN 253 (358)
T ss_dssp CCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHH--HTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHT
T ss_pred ccccCcCCCccccccccccccCCHHHHHHHHHHh--cCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhC
Confidence 2 21211100 0123567777777654 4676 88887766443342 222 34567777765
Q ss_pred ---cCCcEEEeCC--CCHHHHHHHHHcCCCc
Q 015862 316 ---FKGTFLVAGG--YDREDGNKAIAEGRAD 341 (399)
Q Consensus 316 ---~~~pvi~~Gg--it~~~a~~~L~~G~~D 341 (399)
+++|++.=|+ ++.++..++++.|.+-
T Consensus 254 ~~~~~vpLVlHGgSG~~~e~i~~ai~~GV~K 284 (358)
T 1dos_A 254 LPHNSLNFVFHGGSGSTAQEIKDSVSYGVVK 284 (358)
T ss_dssp CCTTCSCEEECSCTTCCHHHHHHHHHTTEEE
T ss_pred CCCCCCcEEEeCCCCCCHHHHHHHHHCCCeE
Confidence 6788776664 5788999999999543
No 379
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=93.59 E-value=0.17 Score=47.72 Aligned_cols=124 Identities=11% Similarity=0.087 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+..|- |. -=|.+.|.+ +++.++++++.
T Consensus 16 ~iD~~~l~~lv~~l-------i~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~----v~~~~~~~~~g-- 67 (288)
T 2nuw_A 16 KVNVDALKTHAKNL-------LEKGIDAIFVNGTTGL----GP-----------ALSKDEKRQ----NLNALYDVTHK-- 67 (288)
T ss_dssp CBCHHHHHHHHHHH-------HHTTCCEEEETSTTTT----GG-----------GSCHHHHHH----HHHHHTTTCSC--
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEECccccC----hh-----------hCCHHHHHH----HHHHHHHHhCC--
Confidence 35555555555544 6789999998876641 11 124556654 45555555543
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHhhcCCcEEE-e-----C
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRKAFKGTFLV-A-----G 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 324 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+.. +. ......+.+.|-+++++||+. + |
T Consensus 68 ViaGvg----------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s-~~~l~~~f~~va~a~~lPiilYn~P~~tg 136 (288)
T 2nuw_A 68 LIFQVG----------SLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLP-EKFLAKYYEEIARISSHSLYIYNYPAATG 136 (288)
T ss_dssp EEEECC----------CSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCC-HHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred eEEeeC----------CCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCC-HHHHHHHHHHHHHhcCCCEEEEECchHhC
Confidence 333222 3356779999999999999999887776543 21 111234556777888999664 2 3
Q ss_pred -CCCHHHHHHH
Q 015862 325 -GYDREDGNKA 334 (399)
Q Consensus 325 -git~~~a~~~ 334 (399)
.++++...++
T Consensus 137 ~~l~~~~~~~L 147 (288)
T 2nuw_A 137 YDIPPSILKSL 147 (288)
T ss_dssp CCCCHHHHTTT
T ss_pred cCCCHHHHhcc
Confidence 2478877766
No 380
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.50 E-value=0.69 Score=43.49 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
..|.+|++.+.++- ..++++|+|||-+++ |.+ | |++. ...+.++++ ..+.
T Consensus 104 ~Ys~~E~~~M~~dI----~~~~~~GAdGvVfG~---------L~~------d---g~iD--~~~~~~Li~----~a~~-- 153 (287)
T 3iwp_A 104 LYSDREIEVMKADI----RLAKLYGADGLVFGA---------LTE------D---GHID--KELCMSLMA----ICRP-- 153 (287)
T ss_dssp CCCHHHHHHHHHHH----HHHHHTTCSEEEECC---------BCT------T---SCBC--HHHHHHHHH----HHTT--
T ss_pred ccCHHHHHHHHHHH----HHHHHcCCCEEEEee---------eCC------C---CCcC--HHHHHHHHH----HcCC--
Confidence 36888988887764 667789999999874 211 1 1111 112233333 3332
Q ss_pred eEEEecC-CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC--CcEEEeCCCCH
Q 015862 252 VGIRLSP-FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK--GTFLVAGGYDR 328 (399)
Q Consensus 252 v~vrls~-~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggit~ 328 (399)
+.+=++. ++.. .++ .+..+.|.++|++-|-.+... . .-....+.++.+.+..+ ++|++.||+++
T Consensus 154 l~vTFHRAFD~~-----~d~----~~Ale~Li~lGvdrILTSG~~-~---~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~ 220 (287)
T 3iwp_A 154 LPVTFHRAFDMV-----HDP----MAALETLLTLGFERVLTSGCD-S---SALEGLPLIKRLIEQAKGRIVVMPGGGITD 220 (287)
T ss_dssp SCEEECGGGGGC-----SCH----HHHHHHHHHHTCSEEEECTTS-S---STTTTHHHHHHHHHHHTTSSEEEECTTCCT
T ss_pred CcEEEECchhcc-----CCH----HHHHHHHHHcCCCEEECCCCC-C---ChHHhHHHHHHHHHHhCCCCEEEECCCcCH
Confidence 3333332 2111 122 334556667799987655431 1 11223445555554443 78999999999
Q ss_pred HHHHHHHH-cCCCcEEEec
Q 015862 329 EDGNKAIA-EGRADLVVYG 346 (399)
Q Consensus 329 ~~a~~~L~-~G~~D~V~~g 346 (399)
+.+.++++ .| ++-+-+.
T Consensus 221 ~Ni~~l~~~tG-~~~~H~S 238 (287)
T 3iwp_A 221 RNLQRILEGSG-ATEFHCS 238 (287)
T ss_dssp TTHHHHHHHHC-CSEEEEC
T ss_pred HHHHHHHHhhC-CCEEeEC
Confidence 99999998 66 7777663
No 381
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.47 E-value=0.62 Score=42.29 Aligned_cols=122 Identities=12% Similarity=0.036 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.++.+.++|.+.|||-.- + .-..+.++++++.++.-.++.-. .
T Consensus 40 ~~~~~~al~~gGv~~iel~~k----------------~-----------~~~~~~i~~l~~~~~~~~igagt-v------ 85 (225)
T 1mxs_A 40 ILPLADALAAGGIRTLEVTLR----------------S-----------QHGLKAIQVLREQRPELCVGAGT-V------ 85 (225)
T ss_dssp HHHHHHHHHHTTCCEEEEESS----------------S-----------THHHHHHHHHHHHCTTSEEEEEC-C------
T ss_pred HHHHHHHHHHCCCCEEEEecC----------------C-----------ccHHHHHHHHHHhCcccEEeeCe-E------
Confidence 466778889999999998621 1 12367788888888532333321 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVV 344 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 344 (399)
... +-++...+.|+|++|. |.. . .-+...++..+.+++. |-.|++++.++++.| +|+|.
T Consensus 86 ----l~~----d~~~~A~~aGAd~v~~--p~~--------d-~~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~G-ad~vk 144 (225)
T 1mxs_A 86 ----LDR----SMFAAVEAAGAQFVVT--PGI--------T-EDILEAGVDSEIPLLP-GISTPSEIMMGYALG-YRRFK 144 (225)
T ss_dssp ----CSH----HHHHHHHHHTCSSEEC--SSC--------C-HHHHHHHHHCSSCEEC-EECSHHHHHHHHTTT-CCEEE
T ss_pred ----eeH----HHHHHHHHCCCCEEEe--CCC--------C-HHHHHHHHHhCCCEEE-eeCCHHHHHHHHHCC-CCEEE
Confidence 011 2344455679999983 211 1 2333455557777764 333999999999998 99999
Q ss_pred echHH--hhCCcHHHHHHhC
Q 015862 345 YGRLF--LANPDLPRRFELN 362 (399)
Q Consensus 345 ~gR~~--iadPdl~~k~~~g 362 (399)
+ -+. +.-|++.+.++.-
T Consensus 145 ~-FPa~~~~G~~~lk~i~~~ 163 (225)
T 1mxs_A 145 L-FPAEISGGVAAIKAFGGP 163 (225)
T ss_dssp E-TTHHHHTHHHHHHHHHTT
T ss_pred E-ccCccccCHHHHHHHHhh
Confidence 8 221 1124556666653
No 382
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.45 E-value=2.7 Score=39.07 Aligned_cols=145 Identities=14% Similarity=0.055 Sum_probs=82.9
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.-.|+.+.++|||.|-+ +.. |-.-.+ =..|--.=++ .-.+..+++|++.+..-+|.+.+.- .
T Consensus 27 ~~sA~l~e~aG~d~ilv-Gds--l~~~~l-----G~~dt~~vtl----demi~h~~aV~r~~~~~~vvaD~pf----g-- 88 (264)
T 1m3u_A 27 YSFAKLFADEGLNVMLV-GDS--LGMTVQ-----GHDSTLPVTV----ADIAYHTAAVRRGAPNCLLLADLPF----M-- 88 (264)
T ss_dssp HHHHHHHHHHTCCEEEE-CTT--HHHHTT-----CCSSSTTCCH----HHHHHHHHHHHHHCTTSEEEEECCT----T--
T ss_pred HHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCcCH----HHHHHHHHHHHhhCCCCcEEEECCC----C--
Confidence 66788999999999987 321 111111 0011101122 2346667788887753345565421 1
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEE-----------eCCC-----C
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLV-----------AGGY-----D 327 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~-----------~Ggi-----t 327 (399)
+.. +.+++.+-+.+|.+.|++.+++-.+ .+.+..||..+ .+||++ -|++ |
T Consensus 89 sy~-~~~~a~~~a~rl~kaGa~aVklEgg-----------~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt 156 (264)
T 1m3u_A 89 AYA-TPEQAFENAATVMRAGANMVKIEGG-----------EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRG 156 (264)
T ss_dssp SSS-SHHHHHHHHHHHHHTTCSEEECCCS-----------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCS
T ss_pred CcC-CHHHHHHHHHHHHHcCCCEEEECCc-----------HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCC
Confidence 123 5677888888888899999997433 13444455443 588872 2333 3
Q ss_pred H-------HHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 R-------EDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 ~-------~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
. ++|..+.+.| ||.|.+-= +. .++.+++.+...
T Consensus 157 ~~~a~~~i~rA~a~~eAG-A~~ivlE~--vp-~~~a~~it~~l~ 196 (264)
T 1m3u_A 157 DEAGDQLLSDALALEAAG-AQLLVLEC--VP-VELAKRITEALA 196 (264)
T ss_dssp HHHHHHHHHHHHHHHHHT-CCEEEEES--CC-HHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHCC-CcEEEEec--CC-HHHHHHHHHhCC
Confidence 2 3455555677 99887732 22 256777776544
No 383
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.44 E-value=0.41 Score=43.62 Aligned_cols=111 Identities=18% Similarity=0.210 Sum_probs=74.8
Q ss_pred hhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhH
Q 015862 231 NRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLL 310 (399)
Q Consensus 231 nR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~ 310 (399)
|-+-.+.++++.+...-| -.|+++--+.+. -....+..++++..++.|+..|.+. ..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~-livscq~~~~~p------l~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~ 62 (229)
T 3q58_A 2 NAMSLLARLEQSVHENGG-LIVSCQPVPGSP------MDKPEIVAAMAQAAASAGAVAVRIE------------GIENLR 62 (229)
T ss_dssp HHHHHHHHHHHHHHHHCC-EEEECCCCTTST------TCSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHH
T ss_pred chHHHHHHHHHHhhhcCC-EEEEEeCCCCCC------CCCcchHHHHHHHHHHCCCcEEEEC------------CHHHHH
Confidence 445566677777743321 145554433221 1234568899999999999988762 246788
Q ss_pred HHHhhcCCcEEEeC-----C---C-C--HHHHHHHHHcCCCcEEEechHHhhCC----cHHHHHHh
Q 015862 311 PMRKAFKGTFLVAG-----G---Y-D--REDGNKAIAEGRADLVVYGRLFLANP----DLPRRFEL 361 (399)
Q Consensus 311 ~ir~~~~~pvi~~G-----g---i-t--~~~a~~~L~~G~~D~V~~gR~~iadP----dl~~k~~~ 361 (399)
.+|+.+++||++.- + + + .+++..+++.| +|+|.+.-....+| ++.+++++
T Consensus 63 ~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG-ad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 63 TVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG-ADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp HHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC-CCEEEECccccCChHHHHHHHHHHHH
Confidence 99999999987432 1 3 4 46889999998 99999877766677 45666665
No 384
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=93.38 E-value=0.45 Score=44.88 Aligned_cols=88 Identities=11% Similarity=-0.031 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc
Q 015862 237 LEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF 316 (399)
Q Consensus 237 ~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~ 316 (399)
.+.++++|+..+..+|.|-+. +.+++.+ ..++|+|+|-+... ..+.++++.+.+
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~------------tl~ea~e----Al~aGaD~I~LDn~----------~~~~l~~av~~~ 239 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT------------NLDELNQ----AIAAKADIVMLDNF----------SGEDIDIAVSIA 239 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES------------SHHHHHH----HHHTTCSEEEEESC----------CHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEeC------------CHHHHHH----HHHcCCCEEEEcCC----------CHHHHHHHHHhh
Confidence 466677777633225665332 2344332 23469999887532 123344444444
Q ss_pred --CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhh
Q 015862 317 --KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 317 --~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
++++.++||+|++.+.++.+.| +|+|++|.-.-.
T Consensus 240 ~~~v~ieaSGGIt~~~i~~~a~tG-VD~IsvGalt~s 275 (287)
T 3tqv_A 240 RGKVALEVSGNIDRNSIVAIAKTG-VDFISVGAITKH 275 (287)
T ss_dssp TTTCEEEEESSCCTTTHHHHHTTT-CSEEECSHHHHS
T ss_pred cCCceEEEECCCCHHHHHHHHHcC-CCEEEEChhhcC
Confidence 4779999999999999999998 999999865433
No 385
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.29 E-value=0.21 Score=48.88 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHh
Q 015862 235 FALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRK 314 (399)
Q Consensus 235 ~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~ 314 (399)
-..+.++++|+. ++..+++=+... . +..+.++.|.++|+|+|++.... . ......+.++.+|+
T Consensus 83 ~~~~~i~~vk~~-~~l~vga~vg~~--------~----~~~~~~~~lieaGvd~I~idta~-G---~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 83 QQAAQVHQVKIS-GGLRVGAAVGAA--------P----GNEERVKALVEAGVDVLLIDSSH-G---HSEGVLQRIRETRA 145 (366)
T ss_dssp HHHHHHHHHHTT-TSCCCEEECCSC--------T----TCHHHHHHHHHTTCSEEEEECSC-T---TSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CceeEEEEeccC--------h----hHHHHHHHHHhCCCCEEEEeCCC-C---CCHHHHHHHHHHHH
Confidence 345677777765 222344433221 1 12446777888999999985321 0 01112346778888
Q ss_pred hc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 315 AF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 315 ~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+ ++||++..-.|+++|+++++.| +|+|.+|
T Consensus 146 ~~p~v~Vi~G~v~t~e~A~~a~~aG-AD~I~vG 177 (366)
T 4fo4_A 146 AYPHLEIIGGNVATAEGARALIEAG-VSAVKVG 177 (366)
T ss_dssp HCTTCEEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred hcCCCceEeeeeCCHHHHHHHHHcC-CCEEEEe
Confidence 88 5677664344999999999998 9999984
No 386
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.26 E-value=0.27 Score=46.71 Aligned_cols=140 Identities=13% Similarity=0.109 Sum_probs=85.0
Q ss_pred HHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC--CcccCCC
Q 015862 188 AARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP--FANYMES 265 (399)
Q Consensus 188 aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~--~~~~~~~ 265 (399)
-.++|.++|+|.|.|..+. |+. ++....+-+++.-.+.+.++++.+|+. |. .|..-++- ...+.
T Consensus 88 ~i~~a~~aG~~~v~i~~~~--------s~~--~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~-~V~~~l~~~~~~e~~-- 153 (302)
T 2ftp_A 88 GFEAALESGVKEVAVFAAA--------SEA--FSQRNINCSIKDSLERFVPVLEAARQH-QV-RVRGYISCVLGCPYD-- 153 (302)
T ss_dssp HHHHHHHTTCCEEEEEEES--------CHH--HHHHHHSSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECTTCBTTT--
T ss_pred HHHHHHhCCcCEEEEEEec--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-eEEEEEEEEeeCCcC--
Confidence 3456778999999875332 111 112223446777778888888888775 32 22222221 00111
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeC--CC--CHHHHHHHHHcCCC
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAG--GY--DREDGNKAIAEGRA 340 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G--gi--t~~~a~~~L~~G~~ 340 (399)
+..+.+...++++.+.+.|+|.|.+... .+. ..+....+.++.+++.+ ++|+..=+ .. ....+..+++.| +
T Consensus 154 -~~~~~~~~~~~~~~~~~~G~d~i~l~DT-~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aG-a 229 (302)
T 2ftp_A 154 -GDVDPRQVAWVARELQQMGCYEVSLGDT-IGV-GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEG-I 229 (302)
T ss_dssp -BCCCHHHHHHHHHHHHHTTCSEEEEEES-SSC-CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTT-C
T ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEEeCC-CCC-cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhC-C
Confidence 1345788999999999999999988632 111 11112345677888888 47765444 33 477888999998 7
Q ss_pred cEEEe
Q 015862 341 DLVVY 345 (399)
Q Consensus 341 D~V~~ 345 (399)
+.|-.
T Consensus 230 ~~vd~ 234 (302)
T 2ftp_A 230 AVFDS 234 (302)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 77654
No 387
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=93.26 E-value=0.28 Score=44.77 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHH
Q 015862 233 CRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPM 312 (399)
Q Consensus 233 ~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~i 312 (399)
+..+..+++.++..-| -.|+++--+.+. -....+..++++..++.|+..+.+. ..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~-livscq~~~~~p------l~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~~i 64 (232)
T 3igs_A 4 MSLLEQLDKNIAASGG-LIVSCQPVPGSP------LDKPEIVAAMALAAEQAGAVAVRIE------------GIDNLRMT 64 (232)
T ss_dssp CCHHHHHHHHHHHHCC-EEEECCCCTTCT------TCSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHHHH
T ss_pred HHHHHHHHHHhhhcCC-EEEEEeCCCCCC------CCCcchHHHHHHHHHHCCCeEEEEC------------CHHHHHHH
Confidence 4456667777744321 145554433221 1135568899999999999887752 24678899
Q ss_pred HhhcCCcEEEe-----CC---C-C--HHHHHHHHHcCCCcEEEechHHhhCCc----HHHHHHh
Q 015862 313 RKAFKGTFLVA-----GG---Y-D--REDGNKAIAEGRADLVVYGRLFLANPD----LPRRFEL 361 (399)
Q Consensus 313 r~~~~~pvi~~-----Gg---i-t--~~~a~~~L~~G~~D~V~~gR~~iadPd----l~~k~~~ 361 (399)
|+.+++||++. |+ + + .++++.+++.| +|+|.+.-....+|+ +.+++++
T Consensus 65 r~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 65 RSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp HTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred HHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEEEECccccCCHHHHHHHHHHHHH
Confidence 99999999752 22 3 4 56899999998 999998877767774 5566665
No 388
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=93.24 E-value=0.65 Score=43.97 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=67.0
Q ss_pred ccCCCCCCCCc--hhhhhHHH---HHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEe
Q 015862 218 VNDRTDQYGGS--LENRCRFA---LEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMV 292 (399)
Q Consensus 218 ~N~R~D~yGGs--lenR~r~~---~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~ 292 (399)
.|||-+-|-+- .+|-..++ .+-|+++|+..+..+|.|-+. +.++..+. .++|+|.|-+.
T Consensus 171 ~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~~p~~kIeVEv~------------tl~e~~eA----l~aGaDiImLD 234 (300)
T 3l0g_A 171 ESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECD------------NISQVEES----LSNNVDMILLD 234 (300)
T ss_dssp BCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHHSSSCCEEEEES------------SHHHHHHH----HHTTCSEEEEE
T ss_pred cccccCCcceEEEcHhHHHHhCCHHHHHHHHHHhCCCCCEEEEEC------------CHHHHHHH----HHcCCCEEEEC
Confidence 58888776653 35655554 567777888765335555332 23443332 24689988765
Q ss_pred CCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 015862 293 EPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
.. ..+.++++.+.+ ++.+.++||+|++.+.++.+.| +|+|++|.-.
T Consensus 235 n~----------s~~~l~~av~~~~~~v~leaSGGIt~~~i~~~A~tG-VD~IsvGalt 282 (300)
T 3l0g_A 235 NM----------SISEIKKAVDIVNGKSVLEVSGCVNIRNVRNIALTG-VDYISIGCIT 282 (300)
T ss_dssp SC----------CHHHHHHHHHHHTTSSEEEEESSCCTTTHHHHHTTT-CSEEECGGGT
T ss_pred CC----------CHHHHHHHHHhhcCceEEEEECCCCHHHHHHHHHcC-CCEEEeCccc
Confidence 32 112333333322 4678999999999999999988 9999999543
No 389
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.20 E-value=1.9 Score=40.70 Aligned_cols=155 Identities=16% Similarity=0.110 Sum_probs=89.0
Q ss_pred HHHHHHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+. .+. ..+ -..|--.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 27 ~~sA~~~~~aG~~ai~vs~~~~a~---~~~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~PviaD~d~------ 87 (295)
T 1xg4_A 27 ANHALLAQRAGYQAIYLSGGGVAA---GSL-----GLPDLGISTLD----DVLTDIRRITDVCS-LPLLVDADI------ 87 (295)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH---TTT-----CCCSSSCSCHH----HHHHHHHHHHHHCC-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECchHhhh---hhc-----CCCCCCCCCHH----HHHHHHHHHHhhCC-CCEEecCCc------
Confidence 56788999999999997654 221 000 12221111333 34556666666664 377776532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc------cCCCchhhHHHHhhc----CCcEEEeCCCC-------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE------KSECPHSLLPMRKAF----KGTFLVAGGYD------- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~------~~~~~~~~~~ir~~~----~~pvi~~Ggit------- 327 (399)
|.+...+.+.+.++.|+++|++.|++-.....+.-. -.+..+.+.+|+.++ ..+++..++.+
T Consensus 88 -Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl 166 (295)
T 1xg4_A 88 -GFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGL 166 (295)
T ss_dssp -CSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCH
T ss_pred -ccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCH
Confidence 223345668888999999999999986543211000 111223444444432 34555555542
Q ss_pred ---HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCC
Q 015862 328 ---REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNA 363 (399)
Q Consensus 328 ---~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~ 363 (399)
.+.|..+.+.| +|+|.+= .+.+++..+++.+..
T Consensus 167 ~~ai~ra~ay~eAG-Ad~i~~e--~~~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 167 DAAIERAQAYVEAG-AEMLFPE--AITELAMYRQFADAV 202 (295)
T ss_dssp HHHHHHHHHHHHTT-CSEEEET--TCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCEEEEe--CCCCHHHHHHHHHHc
Confidence 23456666777 9999883 345667788777653
No 390
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.20 E-value=1 Score=42.68 Aligned_cols=154 Identities=19% Similarity=0.151 Sum_probs=87.8
Q ss_pred HHHHHHHHHhCCCEEEEcc-ccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHG-AHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~-~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+ +.+. ..+ -..|.-.=+++. .+..+++|.+.+. -||.+.+--
T Consensus 32 ~~sA~l~e~aGf~ai~vs~~s~a~---~~~-----G~pD~~~vt~~e----m~~~~~~I~r~~~-~PviaD~d~------ 92 (298)
T 3eoo_A 32 AYAAKMAEAVGFKAVYLSGGGVAA---NSL-----GIPDLGISTMDD----VLVDANRITNATN-LPLLVDIDT------ 92 (298)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHH---HTT-----CCCSSSCCCHHH----HHHHHHHHHHHCC-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH---Hhc-----CCCCCCCCCHHH----HHHHHHHHHhhcC-CeEEEECCC------
Confidence 5678888999999999875 2220 000 112211113332 3445555555553 277775532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc---c---cCCCchhhHHHHhh---c-CCcEEEeCCCC-------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE---E---KSECPHSLLPMRKA---F-KGTFLVAGGYD------- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~---~---~~~~~~~~~~ir~~---~-~~pvi~~Ggit------- 327 (399)
|.+ ..+...+.++.++++|+..+++-.......- . -.+..+++.+|+.+ . +.+++.+.+.+
T Consensus 93 -Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gl 170 (298)
T 3eoo_A 93 -GWG-GAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGI 170 (298)
T ss_dssp -CSS-SHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHH
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCH
Confidence 223 3556788899999999999998654321100 0 11222445555443 2 34455565541
Q ss_pred ---HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCC
Q 015862 328 ---REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNA 363 (399)
Q Consensus 328 ---~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~ 363 (399)
.+.++.+.+.| +|+|.+ ..+.+++..+++.+..
T Consensus 171 deai~Ra~ay~~AG-AD~if~--~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 171 DAAIERAIAYVEAG-ADMIFP--EAMKTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHHHTT-CSEEEE--CCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhHhcC-CCEEEe--CCCCCHHHHHHHHHHc
Confidence 24456677777 999988 3346888888877654
No 391
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=93.19 E-value=0.83 Score=42.31 Aligned_cols=152 Identities=13% Similarity=0.095 Sum_probs=87.0
Q ss_pred HHHHHHHHHhCCCEEEEcc-ccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHG-AHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~-~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-. +.+.. + =..|--.=+++ -.+..+++|++.+. -||.+.+--
T Consensus 30 ~~sA~~~~~aG~dai~vg~~s~a~~----~-----G~pD~~~vt~~----em~~~~~~I~r~~~-~pviaD~~~------ 89 (255)
T 2qiw_A 30 TWSAGLVEEAGFSGLTIGSHPVADA----T-----GSSDGENMNFA----DYMAVVKKITSAVS-IPVSVDVES------ 89 (255)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHHH----T-----TCCTTTCSCHH----HHHHHHHHHHHHCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEEChHHHHHh----C-----CCCCCCCcCHH----HHHHHHHHHHhcCC-CCEEeccCC------
Confidence 5678888899999999874 33321 0 11221011233 33555666666664 377776632
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH---hh---cCCcEEEeCCCC-----------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR---KA---FKGTFLVAGGYD----------- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir---~~---~~~pvi~~Ggit----------- 327 (399)
+++.+. .+.++.|.+.|++.+++-.........-.+..+.+.+|| ++ .++|++.+++.+
T Consensus 90 -Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~ 165 (255)
T 2qiw_A 90 -GYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFED 165 (255)
T ss_dssp -CTTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSS
T ss_pred -CcCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchH
Confidence 122333 667788888999999985442111000011123334333 33 257866666542
Q ss_pred -----HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 -----REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 -----~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
.+++..+.+.| ||.|.+ ..+.+++..+++.+..+
T Consensus 166 ~~~~ai~ra~a~~eAG-Ad~i~~--e~~~~~~~~~~i~~~~~ 204 (255)
T 2qiw_A 166 PMVEAIKRIKLMEQAG-ARSVYP--VGLSTAEQVERLVDAVS 204 (255)
T ss_dssp HHHHHHHHHHHHHHHT-CSEEEE--CCCCSHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHcC-CcEEEE--cCCCCHHHHHHHHHhCC
Confidence 23456666777 999988 44667788999888654
No 392
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=93.16 E-value=3.5 Score=39.40 Aligned_cols=173 Identities=14% Similarity=0.071 Sum_probs=90.9
Q ss_pred HhhhHHHHHHHHHcCCeEEEecccCC-CccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCC--ChhHHHHHH
Q 015862 106 VEAWKPIVDAVHAKGGIFFCQIRHVG-RVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRL--RTDEIPQIV 182 (399)
Q Consensus 106 i~~~~~l~~~vh~~g~~i~~QL~H~G-r~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~m--t~~eI~~ii 182 (399)
.+.+.+++++++++|-++++.| |.+ ..+.|.. ...|... +.++..+-+
T Consensus 59 ~~~~~~~~~~A~~~GlkV~ld~-Hysd~WadPg~----------------------------Q~~p~~W~~~~~~~~~~~ 109 (332)
T 1hjs_A 59 LDYNIAIAKRAKAAGLGVYIDF-HYSDTWADPAH----------------------------QTMPAGWPSDIDNLSWKL 109 (332)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE-CCSSSCCBTTB----------------------------CBCCTTCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-ccCCCcCCccc----------------------------cCCccccccchHHHHHHH
Confidence 4678889999999999999997 532 1111110 0112222 334454444
Q ss_pred HHHH-HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC-CC-ceEEEecCC
Q 015862 183 NDFR-LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG-AD-RVGIRLSPF 259 (399)
Q Consensus 183 ~~f~-~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg-~~-~v~vrls~~ 259 (399)
.+|. +.+.+.++.|.+-.-+..|+. +...++.|.-.. ...++..+|+.+.+++||+..+ +. .|.+-+..
T Consensus 110 ~~yt~~vl~~l~~~g~~~~~v~vGNE-i~~g~~w~~g~~------~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~- 181 (332)
T 1hjs_A 110 YNYTLDAANKLQNAGIQPTIVSIGNE-IRAGLLWPTGRT------ENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN- 181 (332)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEESSS-GGGEETBTTEET------TCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC-
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEeec-ccccccCcCCCc------cCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC-
Confidence 4444 444555555643322334554 444566553111 1467888999999999998862 34 45554432
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhC------ceEEEEeCCCccccccc-CCCchhhHHHHhhcCCcEEEe
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYG------ILYCHMVEPRMKTREEK-SECPHSLLPMRKAFKGTFLVA 323 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~G------vd~l~v~~~~~~~~~~~-~~~~~~~~~ir~~~~~pvi~~ 323 (399)
....+....+...|.+.| +|+|-++--.++..... ......++.+.+..+.||+.+
T Consensus 182 --------~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~v~ 244 (332)
T 1hjs_A 182 --------GWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVV 244 (332)
T ss_dssp --------TTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred --------ccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCEEEE
Confidence 112333444545554444 67777663222110000 001123445555668897765
No 393
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.15 E-value=1.1 Score=42.98 Aligned_cols=156 Identities=13% Similarity=0.033 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+. .+. ... -..|--.=+++ -.++.+++|.+.+.+-||.+.+--
T Consensus 49 ~~sA~i~e~aGfdai~vs~~~~a~--~~l------G~pD~~~vt~~----em~~~~~~I~r~~~~~PviaD~d~------ 110 (318)
T 1zlp_A 49 ALSAAVVEKTGFHAAFVSGYSVSA--AML------GLPDFGLLTTT----EVVEATRRITAAAPNLCVVVDGDT------ 110 (318)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHH--HHH------CCCSSSCSCHH----HHHHHHHHHHHHSSSSEEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHhh--Hhc------CCCCCCCCCHH----HHHHHHHHHHhhccCCCEEEeCCC------
Confidence 56788999999999998753 321 000 11221111333 345566667676643478876632
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccc------cCCCchhhHHHHh---hc-CCcEEEeCCC-C------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREE------KSECPHSLLPMRK---AF-KGTFLVAGGY-D------ 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~------~~~~~~~~~~ir~---~~-~~pvi~~Ggi-t------ 327 (399)
+.+ ..+...+.++.|+++|++.+++-.....+.-. -.+..+.+.+|+. +. ..+++..++- .
T Consensus 111 -Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl 188 (318)
T 1zlp_A 111 -GGG-GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGL 188 (318)
T ss_dssp -CSS-SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHH
T ss_pred -CCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCH
Confidence 223 45678889999999999999986543211000 1112234444443 32 2445555554 2
Q ss_pred ---HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 ---REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 ---~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
.+++..+.+.| ||.|.+= .+.+++..+++.+...
T Consensus 189 ~~ai~Ra~Ay~eAG-Ad~i~~e--~~~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 189 EEGIRRANLYKEAG-ADATFVE--APANVDELKEVSAKTK 225 (318)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEC--CCCSHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcC-CCEEEEc--CCCCHHHHHHHHHhcC
Confidence 23455666777 9999883 3567788888887654
No 394
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=93.15 E-value=0.85 Score=43.24 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhhhhhCce----EEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC---CHH----HHHHHHH-c
Q 015862 270 PEALGLYMAESLNKYGIL----YCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY---DRE----DGNKAIA-E 337 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd----~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi---t~~----~a~~~L~-~ 337 (399)
+.+...+.++...+.|.| ++-+-- . +..+++.+...+||+..||= +.+ ..+.+++ .
T Consensus 198 dp~~Va~aaRiAaELGADs~~tivK~~y-------~-----e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~a 265 (307)
T 3fok_A 198 STDAVIQSVAIAAGLGNDSSYTWMKLPV-------V-----EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLP 265 (307)
T ss_dssp SHHHHHHHHHHHHTCSSCCSSEEEEEEC-------C-----TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTST
T ss_pred CHHHHHHHHHHHHHhCCCcCCCEEEeCC-------c-----HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhC
Confidence 456566677777888999 887621 1 34567778888997766663 333 4566777 5
Q ss_pred CCCcEEEechHHhh--CCcHHHHH
Q 015862 338 GRADLVVYGRLFLA--NPDLPRRF 359 (399)
Q Consensus 338 G~~D~V~~gR~~ia--dPdl~~k~ 359 (399)
| +-.|.+||-++. ++|-..-+
T Consensus 266 G-a~Gv~vGRNIfQ~~~~dp~~~v 288 (307)
T 3fok_A 266 G-VRGLTVGRTLLYPQDGDVAAAV 288 (307)
T ss_dssp T-EEEEEECTTTSSCSSSCHHHHH
T ss_pred C-CeEEeechhhccCCCCCHHHHH
Confidence 6 889999999999 66654443
No 395
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=93.11 E-value=5.8 Score=39.54 Aligned_cols=154 Identities=9% Similarity=0.037 Sum_probs=75.9
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.++.|++|||.-|-|.+.+.. ---|.+... --..+|+.-+.++.++.+..+|...|+.=++..+...|.
T Consensus 114 ~e~i~~aI~AGFtSVMiD~S~~p-------~eeNi~lt~--evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGG 184 (450)
T 3txv_A 114 EAMITAYAKAGFTKLHLDTSMGC-------AGEPTALPD--ATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGG 184 (450)
T ss_dssp HHHHHHHHTTTCCEEEECCCBCC-------SSSCSBCCH--HHHHHHHHHHHHHHHHTC------CCEEEEECC------
T ss_pred HHHHHHHHHcCCCEEEECCCCCc-------hhhccchhH--HHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCc
Confidence 45567788899999999987721 112222110 012234444444444433334433333333321111110
Q ss_pred -------CCCChHHHHHHHHHh----hhhhCce-------EEEEeCCC-cccccccCCCchhhHHHHhhc-CCc-EEE-e
Q 015862 266 -------GDSNPEALGLYMAES----LNKYGIL-------YCHMVEPR-MKTREEKSECPHSLLPMRKAF-KGT-FLV-A 323 (399)
Q Consensus 266 -------~~~~~~~~~~~l~~~----Le~~Gvd-------~l~v~~~~-~~~~~~~~~~~~~~~~ir~~~-~~p-vi~-~ 323 (399)
....+.+++.++++. +.+.|+| .+-+..+. ++.......+.+.++.|++.+ +.| ++. +
T Consensus 185 a~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhg 264 (450)
T 3txv_A 185 ALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEA 264 (450)
T ss_dssp -------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEE
T ss_pred cccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEec
Confidence 012345666666654 5667776 44333232 111111122345778899988 667 443 4
Q ss_pred CC--C-CHHHHHHHHHcCCCcEEEechHH
Q 015862 324 GG--Y-DREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 324 Gg--i-t~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
|+ + +.+...++++.| +-.+=+|-.+
T Consensus 265 hStDy~~~e~l~~~V~~G-iaklNVgp~L 292 (450)
T 3txv_A 265 HSTDYQTPDALRELVADG-FAILKVGPGL 292 (450)
T ss_dssp SCCTTCCHHHHHHHHHTT-EEEEEECHHH
T ss_pred CCCCCCCHHHHHHHHHcC-CcEEEEChHH
Confidence 44 5 788889999999 6566665443
No 396
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.05 E-value=0.56 Score=42.37 Aligned_cols=122 Identities=16% Similarity=0.112 Sum_probs=78.2
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
..-|+.+.+.|++.|||-. |++ ..++.|+++|++++.-.|+.= -
T Consensus 28 ~~~a~al~~gGi~~iEvt~----------------~t~-----------~a~~~I~~l~~~~p~~~IGAG--T------- 71 (217)
T 3lab_A 28 IPMAKALVAGGVHLLEVTL----------------RTE-----------AGLAAISAIKKAVPEAIVGAG--T------- 71 (217)
T ss_dssp HHHHHHHHHTTCCEEEEET----------------TST-----------THHHHHHHHHHHCTTSEEEEE--C-------
T ss_pred HHHHHHHHHcCCCEEEEeC----------------CCc-----------cHHHHHHHHHHHCCCCeEeec--c-------
Confidence 5556777899999999852 222 248999999999964245541 1
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCC------cEEEeCCCCHHHHHHHHHcCC
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKG------TFLVAGGYDREDGNKAIAEGR 339 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~------pvi~~Ggit~~~a~~~L~~G~ 339 (399)
-.+.+ -++...++|.+|+-. |. ...+.++..++. ++ |++- |-.|++++.++++.|
T Consensus 72 --Vlt~~----~a~~ai~AGA~fivs--P~--------~~~evi~~~~~~-~v~~~~~~~~~P-G~~TptE~~~A~~~G- 132 (217)
T 3lab_A 72 --VCTAD----DFQKAIDAGAQFIVS--PG--------LTPELIEKAKQV-KLDGQWQGVFLP-GVATASEVMIAAQAG- 132 (217)
T ss_dssp --CCSHH----HHHHHHHHTCSEEEE--SS--------CCHHHHHHHHHH-HHHCSCCCEEEE-EECSHHHHHHHHHTT-
T ss_pred --ccCHH----HHHHHHHcCCCEEEe--CC--------CcHHHHHHHHHc-CCCccCCCeEeC-CCCCHHHHHHHHHcC-
Confidence 11233 355667889999852 21 123445444442 44 7665 446999999999999
Q ss_pred CcEEEechHHhh-CCcHHHHHHhC
Q 015862 340 ADLVVYGRLFLA-NPDLPRRFELN 362 (399)
Q Consensus 340 ~D~V~~gR~~ia-dPdl~~k~~~g 362 (399)
+|+|-+=-+-.. .|++.+.++.=
T Consensus 133 ad~vK~FPa~~~gG~~~lkal~~p 156 (217)
T 3lab_A 133 ITQLKCFPASAIGGAKLLKAWSGP 156 (217)
T ss_dssp CCEEEETTTTTTTHHHHHHHHHTT
T ss_pred CCEEEECccccccCHHHHHHHHhh
Confidence 999987332211 25777777763
No 397
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.03 E-value=1 Score=40.93 Aligned_cols=52 Identities=21% Similarity=0.114 Sum_probs=38.1
Q ss_pred hHHHHhhc-CCcEEEeCCCC-HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 309 LLPMRKAF-KGTFLVAGGYD-REDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 309 ~~~ir~~~-~~pvi~~Ggit-~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
.+.+|+.. +++++..|+++ .++.+.+.+.| +|.+.+|.+++.-+++...+++
T Consensus 167 ~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~-vDG~LVG~a~l~a~~~~~~i~~ 220 (225)
T 1hg3_A 167 VELVKKVNPEVKVLCGAGISTGEDVKKAIELG-TVGVLLASGVTKAKDPEKAIWD 220 (225)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTCSSHHHHHHH
T ss_pred HHHHHhccCCCEEEEeCCCCcHHHHHHHHhCC-CCEEEeCHHHHCCcCHHHHHHH
Confidence 34455544 36789999995 55555555555 9999999999999988776653
No 398
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.02 E-value=0.75 Score=41.09 Aligned_cols=104 Identities=15% Similarity=0.098 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.++.+.++|.+.||+..-+ .-..+.++.+|+ ..-.++.-. .
T Consensus 27 ~~~~~~~l~~gGv~~iel~~k~---------------------------~~~~~~i~~~~~--~~~~~gag~-v------ 70 (207)
T 2yw3_A 27 LLGLARVLEEEGVGALEITLRT---------------------------EKGLEALKALRK--SGLLLGAGT-V------ 70 (207)
T ss_dssp HHHHHHHHHHTTCCEEEEECSS---------------------------THHHHHHHHHTT--SSCEEEEES-C------
T ss_pred HHHHHHHHHHcCCCEEEEeCCC---------------------------hHHHHHHHHHhC--CCCEEEeCe-E------
Confidence 4677778889999999986211 123577788877 221333322 1
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVV 344 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 344 (399)
- ..+ -++...+.|+|++|.. .. ..+.++..++ .+.+++.+ -.|++++.++++.| +|+|.
T Consensus 71 ---l-~~d----~~~~A~~~GAd~v~~~--~~--------d~~v~~~~~~-~g~~~i~G-~~t~~e~~~A~~~G-ad~v~ 129 (207)
T 2yw3_A 71 ---R-SPK----EAEAALEAGAAFLVSP--GL--------LEEVAALAQA-RGVPYLPG-VLTPTEVERALALG-LSALK 129 (207)
T ss_dssp ---C-SHH----HHHHHHHHTCSEEEES--SC--------CHHHHHHHHH-HTCCEEEE-ECSHHHHHHHHHTT-CCEEE
T ss_pred ---e-eHH----HHHHHHHcCCCEEEcC--CC--------CHHHHHHHHH-hCCCEEec-CCCHHHHHHHHHCC-CCEEE
Confidence 1 112 2334456799999842 11 2234444444 67776653 33899999999998 99999
Q ss_pred e
Q 015862 345 Y 345 (399)
Q Consensus 345 ~ 345 (399)
+
T Consensus 130 ~ 130 (207)
T 2yw3_A 130 F 130 (207)
T ss_dssp E
T ss_pred E
Confidence 8
No 399
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=92.99 E-value=0.73 Score=46.02 Aligned_cols=100 Identities=16% Similarity=0.171 Sum_probs=64.2
Q ss_pred HHH-HHHHHHHHhCC--C-ceEEEecCCcccCC------CCCC------ChHHHHH-HHHHhhhhhCceEEEEeCCCccc
Q 015862 236 ALE-IVEAVSNEIGA--D-RVGIRLSPFANYME------SGDS------NPEALGL-YMAESLNKYGILYCHMVEPRMKT 298 (399)
Q Consensus 236 ~~e-ii~avR~~vg~--~-~v~vrls~~~~~~~------~~~~------~~~~~~~-~l~~~Le~~Gvd~l~v~~~~~~~ 298 (399)
.++ ++++|| ++|. + .|.+..+..+.+.. .... .+..+.+ .+.+.|+++++.||+ +|.
T Consensus 224 ~l~~i~~Air-~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~i~~iE--dPl--- 297 (432)
T 2ptz_A 224 PLPILMEAIE-EAGHRGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYPIVSIE--DPY--- 297 (432)
T ss_dssp HHHHHHHHHH-HTTCTTSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSCEEEEE--CCS---
T ss_pred HHHHHHHHHH-HhCCcCCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCCceEEE--CCC---
Confidence 355 588998 7887 5 46666654321110 0001 0223332 334788899988877 552
Q ss_pred ccccCCCchhhHHHHhhc--CCcEEEeCC-C--CHHHHHHHHHcCCCcEEEe
Q 015862 299 REEKSECPHSLLPMRKAF--KGTFLVAGG-Y--DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 299 ~~~~~~~~~~~~~ir~~~--~~pvi~~Gg-i--t~~~a~~~L~~G~~D~V~~ 345 (399)
....++..+.+++.+ ++|| +... + +++++.++|+.+.||+|-+
T Consensus 298 ---~~~D~~g~~~l~~~~g~~ipI-~gDe~~v~~~~~~~~~i~~~a~d~i~i 345 (432)
T 2ptz_A 298 ---DQDDFAGFAGITEALKGKTQI-VGDDLTVTNTERIKMAIEKKACNSLLL 345 (432)
T ss_dssp ---CTTCHHHHHHHHHHTTTTSEE-EESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ---CcchHHHHHHHHHhcCCCCeE-EecCcccCCHHHHHHHHHcCCCCEEEe
Confidence 223566778899998 7888 4444 2 6999999999999999876
No 400
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.91 E-value=5.1 Score=37.38 Aligned_cols=162 Identities=12% Similarity=0.017 Sum_probs=91.7
Q ss_pred CCCChhHHHHHHHH----------HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHH
Q 015862 171 RRLRTDEIPQIVND----------FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIV 240 (399)
Q Consensus 171 ~~mt~~eI~~ii~~----------f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii 240 (399)
+.+|..++.++.+. =+-.|+.+.++|||.| +-+.. |-...| =..|--.=+ +.-.+..+
T Consensus 14 ~~~t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~i-lvGdS--l~~~~l-----G~~dt~~vt----ldem~~h~ 81 (275)
T 3vav_A 14 PAVTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQ-LIGDS--LGNVLQ-----GQTTTLPVT----LDDIAYHT 81 (275)
T ss_dssp CCCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEE-EECTT--HHHHTT-----CCSSSTTCC----HHHHHHHH
T ss_pred CCcCHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEE-EECcH--HHHHHc-----CCCCCCccC----HHHHHHHH
Confidence 34788888877764 2668888999999999 44322 111111 011110112 22345666
Q ss_pred HHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcE
Q 015862 241 EAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTF 320 (399)
Q Consensus 241 ~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pv 320 (399)
++|++.+..-+|.+.+-- ++. .+.+++.+-+.+|.+.|++.+++..+. ...+.++.+++ ..+||
T Consensus 82 ~aV~r~~~~~~vvaD~pf------gsY-~s~~~a~~~a~rl~kaGa~aVklEdg~--------~~~~~i~~l~~-~GIpv 145 (275)
T 3vav_A 82 ACVARAQPRALIVADLPF------GTY-GTPADAFASAVKLMRAGAQMVKFEGGE--------WLAETVRFLVE-RAVPV 145 (275)
T ss_dssp HHHHHTCCSSEEEEECCT------TSC-SSHHHHHHHHHHHHHTTCSEEEEECCG--------GGHHHHHHHHH-TTCCE
T ss_pred HHHHhcCCCCCEEEecCC------CCC-CCHHHHHHHHHHHHHcCCCEEEECCch--------hHHHHHHHHHH-CCCCE
Confidence 777776653367766531 112 356777888888888899999985441 12234444544 36787
Q ss_pred EEe-----------CCC-----CH-------HHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 321 LVA-----------GGY-----DR-------EDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 321 i~~-----------Ggi-----t~-------~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
++- |++ |. ++|..+.+.| ||.|.+ ..+.++ +.+++.+...
T Consensus 146 ~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAG-A~~ivl--E~vp~~-~a~~It~~l~ 208 (275)
T 3vav_A 146 CAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAG-AQLIVL--EAVPTL-VAAEVTRELS 208 (275)
T ss_dssp EEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHT-CSEEEE--ESCCHH-HHHHHHHHCS
T ss_pred EEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcC-CCEEEe--cCCCHH-HHHHHHHhCC
Confidence 642 332 22 3344455666 998887 333443 6677766544
No 401
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=92.79 E-value=1.3 Score=42.85 Aligned_cols=127 Identities=13% Similarity=-0.006 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCc
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADR 251 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~ 251 (399)
.++.+.+.++++.+ .+.|.|||-+.+.-|- |. -=|.+.|.+++.. .+ -|.-+
T Consensus 43 ~ID~~~l~~lv~~l-------i~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~---~~---~grvp 94 (344)
T 2hmc_A 43 TPDFDALVRKGKEL-------IADGMSAVVYCGSMGD----WP-----------LLTDEQRMEGVER---LV---KAGIP 94 (344)
T ss_dssp SBCHHHHHHHHHHH-------HHTTCCCEEESSGGGT----GG-----------GSCHHHHHHHHHH---HH---HTTCC
T ss_pred CcCHHHHHHHHHHH-------HHcCCCEEEeCccCcC----hh-----------hCCHHHHHHHHHH---Hh---CCCCc
Confidence 45556666666554 5789999998876642 11 1245667665544 22 23336
Q ss_pred eEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccc-ccccCCCchhhHHHHh-hcCCcEEE-e----C
Q 015862 252 VGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKT-REEKSECPHSLLPMRK-AFKGTFLV-A----G 324 (399)
Q Consensus 252 v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~-~~~~~~~~~~~~~ir~-~~~~pvi~-~----G 324 (399)
|.+=++ ..+..+++++++..++.|+|.+-+..|.+.. +. ......+.+.|-+ ++++||+. + |
T Consensus 95 ViaGvg----------~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s-~~~l~~~f~~IA~aa~~lPiilYn~P~tg 163 (344)
T 2hmc_A 95 VIVGTG----------AVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSV-IAAQKAHFKAILSAAPEIPAVIYNSPYYG 163 (344)
T ss_dssp EEEECC----------CSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTC-HHHHHHHHHHHHHHSTTSCEEEEEBGGGT
T ss_pred EEEecC----------CCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCC-HHHHHHHHHHHHhhCCCCcEEEEecCccC
Confidence 655443 2356779999999999999999887776543 21 1112345667777 78899654 3 3
Q ss_pred -CCCHHHHHHH-HHc
Q 015862 325 -GYDREDGNKA-IAE 337 (399)
Q Consensus 325 -git~~~a~~~-L~~ 337 (399)
.++++...++ .+.
T Consensus 164 ~~l~~e~~~~L~a~~ 178 (344)
T 2hmc_A 164 FATRADLFFALRAEH 178 (344)
T ss_dssp BCCCHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHhcC
Confidence 2489988887 543
No 402
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=92.76 E-value=6.4 Score=38.00 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=75.0
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
.++..+.+.|.|.++|-++. .+| ..++++|-+ .| .||.++-..
T Consensus 115 ~svd~l~~~~v~~~KI~S~~----------~~n-----------------~~LL~~va~-~g-kPviLstGm-------- 157 (349)
T 2wqp_A 115 AAALRLQRMDIPAYKIGSGE----------CNN-----------------YPLIKLVAS-FG-KPIILSTGM-------- 157 (349)
T ss_dssp HHHHHHHHHTCSCEEECGGG----------TTC-----------------HHHHHHHHT-TC-SCEEEECTT--------
T ss_pred HHHHHHHhcCCCEEEECccc----------ccC-----------------HHHHHHHHh-cC-CeEEEECCC--------
Confidence 34445566799999998776 122 556776655 33 278776543
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeC-CCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVE-PRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLV 343 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~-~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 343 (399)
. ++++....++.+.+.|.+.+-++- ..|.. .....++..+..+|+.+ +.||..++-- ....+..++.-| ||+|
T Consensus 158 -a-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~-~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlG-A~iI 233 (349)
T 2wqp_A 158 -N-SIESIKKSVEIIREAGVPYALLHCTNIYPT-PYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALG-GSIL 233 (349)
T ss_dssp -C-CHHHHHHHHHHHHHHTCCEEEEECCCCSSC-CGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHT-CCEE
T ss_pred -C-CHHHHHHHHHHHHHcCCCEEEEeccCCCCC-ChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhC-CCEE
Confidence 2 677777888888888754433321 22221 12223566788899999 8998665443 477788899999 8866
Q ss_pred E
Q 015862 344 V 344 (399)
Q Consensus 344 ~ 344 (399)
-
T Consensus 234 E 234 (349)
T 2wqp_A 234 E 234 (349)
T ss_dssp E
T ss_pred E
Confidence 5
No 403
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.70 E-value=0.46 Score=44.73 Aligned_cols=142 Identities=8% Similarity=-0.015 Sum_probs=85.2
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
.++|.++|+|.|-|..+- |+. ++....+-+.++-.+.+.++++.+|+. |- .|..-++..-.... ...
T Consensus 85 i~~a~~~G~~~V~i~~~~--------S~~--h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~-~V~~~l~~~~~~e~-~~~ 151 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISA--------SEG--FSKANINCTIAESIERLSPVIGAAIND-GL-AIRGYVSCVVECPY-DGP 151 (295)
T ss_dssp HHHHHHTTCSEEEEEEES--------CHH--HHHHHTSSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECSSEETT-TEE
T ss_pred HHHHHHCCCCEEEEEEec--------CHH--HHHHHcCCCHHHHHHHHHHHHHHHHHc-CC-eEEEEEEEEecCCc-CCC
Confidence 467888999999886432 111 111122345677777888888888775 32 23222321000000 113
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeC--C--CCHHHHHHHHHcCCCcEE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAG--G--YDREDGNKAIAEGRADLV 343 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G--g--it~~~a~~~L~~G~~D~V 343 (399)
.+.+...++++.+.+.|+|.|.+... .+. ..+....+.++.+++.++ +|+..=+ . +....+..+++.| ++.|
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt-~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG-~~~v 228 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDT-IGR-GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKG-LRVF 228 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEET-TSC-CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHT-CCEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCC-CCC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhC-CCEE
Confidence 35678899999999999999988632 111 111123456778888887 7765444 3 3467788999998 7776
Q ss_pred Eec
Q 015862 344 VYG 346 (399)
Q Consensus 344 ~~g 346 (399)
-.+
T Consensus 229 d~s 231 (295)
T 1ydn_A 229 DAS 231 (295)
T ss_dssp EEB
T ss_pred Eec
Confidence 554
No 404
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=92.61 E-value=5.1 Score=37.34 Aligned_cols=146 Identities=16% Similarity=0.066 Sum_probs=80.9
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+-.|+.+.++|||.|-+ +.. |-.-.+ =..|--.=++ .-.+..+++|++.+..-+|.+.+.- +
T Consensus 27 a~sA~l~e~aG~d~ilv-GdS--l~~~~l-----G~~dt~~vTl----demi~h~~aV~r~~~~~~vvaD~pf------g 88 (275)
T 1o66_A 27 SSFAALMDDAGVEMLLV-GDS--LGMAVQ-----GRKSTLPVSL----RDMCYHTECVARGAKNAMIVSDLPF------G 88 (275)
T ss_dssp HHHHHHHHHTTCCEEEE-CTT--HHHHTT-----CCSSSTTCCH----HHHHHHHHHHHHHCSSSEEEEECCT------T
T ss_pred HHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCCCH----HHHHHHHHHHHhhCCCCeEEEECCC------C
Confidence 66788999999999954 221 111111 0111101122 2446677778777753345565421 1
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEE-----------eCCC-----C
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLV-----------AGGY-----D 327 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~-----------~Ggi-----t 327 (399)
+...+.+++.+-+.+|.++|++.+++-.+ .+.+..||..+ .+||++ -|+| |
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEdg-----------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt 157 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEGG-----------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRG 157 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEECS-----------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC----------
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECCc-----------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeCh
Confidence 12235677888888888899999998543 13444455443 578762 1332 1
Q ss_pred ------HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 328 ------REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 328 ------~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
.++|..+.+.| ||.|.+-= +. .++.+++.+...
T Consensus 158 ~~a~~~i~rA~a~~eAG-A~~ivlE~--vp-~~~a~~it~~l~ 196 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAG-AAVVLMEC--VL-AELAKKVTETVS 196 (275)
T ss_dssp -CHHHHHHHHHHHHHTT-CSEEEEES--CC-HHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHcC-CcEEEEec--CC-HHHHHHHHHhCC
Confidence 23455555666 99887732 22 366777776544
No 405
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.59 E-value=1 Score=43.98 Aligned_cols=40 Identities=20% Similarity=0.180 Sum_probs=34.0
Q ss_pred chhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 306 PHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
++.++.+++.+++||+.-+..++++++.+++.| +|+|.++
T Consensus 214 ~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~G-ad~I~vs 253 (370)
T 1gox_A 214 WKDVAWLQTITSLPILVKGVITAEDARLAVQHG-AAGIIVS 253 (370)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcC-CCEEEEC
Confidence 346778899999999876667999999999998 9999883
No 406
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=92.51 E-value=0.45 Score=56.16 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhhCceEE---EEeCCCccccccc----CCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHH---------
Q 015862 273 LGLYMAESLNKYGILYC---HMVEPRMKTREEK----SECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAI--------- 335 (399)
Q Consensus 273 ~~~~l~~~Le~~Gvd~l---~v~~~~~~~~~~~----~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L--------- 335 (399)
.++..+...+++|+|++ .+.....+.-... ......+..|++++++|||+.||| |......+|
T Consensus 711 ~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g 790 (2051)
T 2uv8_G 711 DAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFD 790 (2051)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTT
T ss_pred HHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccC
Confidence 35566677778888873 3322211110010 011224678899999999999999 999999999
Q ss_pred --HcCCCcEEEechHHhhCC
Q 015862 336 --AEGRADLVVYGRLFLANP 353 (399)
Q Consensus 336 --~~G~~D~V~~gR~~iadP 353 (399)
.-| +|.|.||..|++-.
T Consensus 791 ~~~lg-adGv~~GTrf~~t~ 809 (2051)
T 2uv8_G 791 YPPMP-FDGFLFGSRVMIAK 809 (2051)
T ss_dssp CCCCC-CSCEECSGGGTTST
T ss_pred ccCCC-CceeeechHHHhCc
Confidence 566 99999999999755
No 407
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.48 E-value=0.82 Score=42.79 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEE--ecC---
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIR--LSP--- 258 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vr--ls~--- 258 (399)
+-.+.|.+..++|+++|.|-.+. ...+.|++++++ |- ++.-- +.+
T Consensus 107 ~a~~~a~rl~kaGa~aVklEdg~----------------------------~~~~~i~~l~~~-GI-pv~gHlgltPq~~ 156 (275)
T 3vav_A 107 DAFASAVKLMRAGAQMVKFEGGE----------------------------WLAETVRFLVER-AV-PVCAHVGLTPQSV 156 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGGH
T ss_pred HHHHHHHHHHHcCCCEEEECCch----------------------------hHHHHHHHHHHC-CC-CEEEecCCCceEE
Confidence 34666777778899999988542 236777777764 32 33221 222
Q ss_pred --CcccCCCCCC-ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC
Q 015862 259 --FANYMESGDS-NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG 325 (399)
Q Consensus 259 --~~~~~~~~~~-~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 325 (399)
..+|.-.+.. ...++.++-++.++++|++.|-+... +. ..++.|.+.+++|+|+.|.
T Consensus 157 ~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v---------p~-~~a~~It~~l~iP~igIGa 216 (275)
T 3vav_A 157 HAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAV---------PT-LVAAEVTRELSIPTIGIGA 216 (275)
T ss_dssp HHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESC---------CH-HHHHHHHHHCSSCEEEESS
T ss_pred eccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCC---------CH-HHHHHHHHhCCCCEEEEcc
Confidence 1111111211 23466777888999999998876321 12 3788899999999988764
No 408
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=92.42 E-value=3.6 Score=36.59 Aligned_cols=66 Identities=18% Similarity=0.033 Sum_probs=41.3
Q ss_pred CceEEEEeCCCcc-cccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhh
Q 015862 285 GILYCHMVEPRMK-TREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 285 Gvd~l~v~~~~~~-~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
.+|++-+....-. ........|..++.++ ..+.|++..||++|+...++|+.-.++.|-+..++=.
T Consensus 119 ~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~ 185 (205)
T 1nsj_A 119 REFPILLDTKTPEYGGSGKTFDWSLILPYR-DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEA 185 (205)
T ss_dssp TTSCEEEEESCSSSSSCCSCCCGGGTGGGG-GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEE
T ss_pred CCCEEEECCCCCCCCCCCCccCHHHHHhhh-cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceec
Confidence 3777665432210 0012223455554432 3368999999999999988887534888888887764
No 409
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.35 E-value=0.26 Score=43.56 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=51.6
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEEech
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGY-DREDGNKAIAEGRADLVVYGR 347 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR 347 (399)
+.+++..+++.+.+.|+++++++.... ...+.++.+|+.++ ..++..|.+ |+++++.+++.| +|+| ++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~-------~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~G-ad~i-v~~ 90 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVP-------DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESG-AEFI-VSP 90 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTST-------THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHT-CSEE-ECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCh-------hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcC-CCEE-EcC
Confidence 356788999999999999999874420 12345777888774 335556565 899999999998 9999 654
Q ss_pred H
Q 015862 348 L 348 (399)
Q Consensus 348 ~ 348 (399)
.
T Consensus 91 ~ 91 (205)
T 1wa3_A 91 H 91 (205)
T ss_dssp S
T ss_pred C
Confidence 4
No 410
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=92.24 E-value=0.19 Score=45.93 Aligned_cols=81 Identities=14% Similarity=0.035 Sum_probs=56.0
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCcccccccC--------------CC----chhhHHHHhhcCCcEEEeCCCCH----
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEKS--------------EC----PHSLLPMRKAFKGTFLVAGGYDR---- 328 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~--------------~~----~~~~~~ir~~~~~pvi~~Ggit~---- 328 (399)
.+++.+.++.+++. +|+||+.-|. +.+.... .+ .+.++.+|+.+++||...+.+++
T Consensus 18 ~~~~~~~a~~~~~~-ad~iel~~p~-sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 18 KQSTLNFLLALDEY-AGAIELGIPF-SDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp HHHHHHHHHHHGGG-BSCEEEECCC-SCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCCC-CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhc
Confidence 46788899999999 9999997552 1111110 01 34677888888899877665554
Q ss_pred ---HHHHHHHHcCCCcEEEechHHhhCCc
Q 015862 329 ---EDGNKAIAEGRADLVVYGRLFLANPD 354 (399)
Q Consensus 329 ---~~a~~~L~~G~~D~V~~gR~~iadPd 354 (399)
+.++.+++.| +|+|.++--...++.
T Consensus 96 ~~~~~~~~~~~~G-ad~v~~~~~~~~~~~ 123 (248)
T 1geq_A 96 GVRNFLAEAKASG-VDGILVVDLPVFHAK 123 (248)
T ss_dssp CHHHHHHHHHHHT-CCEEEETTCCGGGHH
T ss_pred CHHHHHHHHHHCC-CCEEEECCCChhhHH
Confidence 6778888998 999999744344443
No 411
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.14 E-value=0.23 Score=46.53 Aligned_cols=78 Identities=18% Similarity=0.092 Sum_probs=58.7
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iad 352 (399)
..++++..++.|++.|++..-. ..+. -..+.++.+|+.+++||+.-+.+ ++.+...+.+.| +|.|.++-+.+.+
T Consensus 74 p~~~A~~y~~~GA~~isvltd~--~~f~--Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a~l~~ 148 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQ--RRFQ--GSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVAALEQ 148 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCG--GGHH--HHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGGGSCH
T ss_pred HHHHHHHHHHcCCCEEEEecCh--hhcC--CCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC-CCEEEEecccCCH
Confidence 4678999999999999985221 0000 02357888999999999987766 898899999998 9999998777765
Q ss_pred CcHH
Q 015862 353 PDLP 356 (399)
Q Consensus 353 Pdl~ 356 (399)
.++.
T Consensus 149 ~~l~ 152 (272)
T 3qja_A 149 SVLV 152 (272)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 412
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=91.95 E-value=1.4 Score=40.11 Aligned_cols=51 Identities=14% Similarity=0.178 Sum_probs=37.6
Q ss_pred hHHHHhhc-CCcEEEeCCCC-HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHH
Q 015862 309 LLPMRKAF-KGTFLVAGGYD-REDGNKAIAEGRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 309 ~~~ir~~~-~~pvi~~Ggit-~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
.+.+|+.. +++++..|+++ .++.+.+.+.| +|.+.+|.+++.-+|+...++
T Consensus 164 ~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~g-iDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 164 VGLVSRHFPEVSVITGAGIESGDDVAAALRLG-TRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHTCSSHHHHHH
T ss_pred HHHHHhccCCCEEEEeCCCCcHHHHHHHHhCC-CCEEEECHHHHCCcCHHHHHH
Confidence 34455544 36789999995 55555555565 999999999999998876654
No 413
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=91.93 E-value=1.6 Score=39.67 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.++++.+.++|+|.|+..-|.+ -..+=++.. ..||.-....++.+++++ .+|+ .++||.+.
T Consensus 131 ~~a~~ia~eaGADfVKTSTGf~--~~~~~~~~~-----~~~gAt~~dv~lm~~~i~----~~g~-~v~vKaaG------- 191 (226)
T 1vcv_A 131 YTLYDIIAEAGAHFIKSSTGFA--EEAYAARQG-----NPVHSTPERAAAIARYIK----EKGY-RLGVKMAG------- 191 (226)
T ss_dssp HHHHHHHHHHTCSEEECCCSCC--CHHHHHHTT-----CCSSCCHHHHHHHHHHHH----HHTC-CCEEEEES-------
T ss_pred HHHHHHHHHcCCCEEEeCCCCC--ccccccccC-----CCCCCCHHHHHHHHHHHH----HhCC-CceEEEeC-------
Confidence 6888999999999999664431 000000111 114432323344444443 2553 57999986
Q ss_pred CCCChHHHHHHHHHhhhhhCce
Q 015862 266 GDSNPEALGLYMAESLNKYGIL 287 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd 287 (399)
+--+.+++..+.+.. ++|++
T Consensus 192 -Girt~~~al~~i~a~-~~Ga~ 211 (226)
T 1vcv_A 192 -GIRTREQAKAIVDAI-GWGED 211 (226)
T ss_dssp -SCCSHHHHHHHHHHH-CSCSC
T ss_pred -CCCCHHHHHHHHHHH-HCCCC
Confidence 233577777777766 47877
No 414
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.91 E-value=0.36 Score=45.23 Aligned_cols=76 Identities=16% Similarity=0.027 Sum_probs=58.6
Q ss_pred HHHHHHhhhhhCceEEEEeC-CCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 015862 274 GLYMAESLNKYGILYCHMVE-PRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~-~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
..++++..++.|++.|+|.. +.+. . ...+.++.+|+.+++||+.-+.+ ++.+..++...| +|.|.+.-..+.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f---~--Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~L~ 154 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSF---Q--GAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMASVD 154 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTT---C--CCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTTSC
T ss_pred HHHHHHHHHHCCCCEEEEecccccc---C--CCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccccC
Confidence 35688999999999999742 1111 1 24567888999999999988777 888999999998 999999887775
Q ss_pred CCcH
Q 015862 352 NPDL 355 (399)
Q Consensus 352 dPdl 355 (399)
+.++
T Consensus 155 ~~~l 158 (272)
T 3tsm_A 155 DDLA 158 (272)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 415
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=91.91 E-value=0.74 Score=42.69 Aligned_cols=131 Identities=9% Similarity=0.033 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
..+.|+.+.+.|+|.||+-.-+ | -. . .....+.+.+..+|+.+++-||.+=++...+ |
T Consensus 34 ~l~~a~~~~~~~aD~vElR~D~-------l-----------~~-~-~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~E--G 91 (258)
T 4h3d_A 34 IIKEAKELKDACLDIIEWRVDF-------F-----------EN-V-ENIKEVKEVLYELRSYIHDIPLLFTFRSVVE--G 91 (258)
T ss_dssp HHHHHHHHTTSSCSEEEEEGGG-------C-----------TT-T-TCHHHHHHHHHHHHHHCTTSCEEEECCCGGG--T
T ss_pred HHHHHHHHhhcCCCEEEEeecc-------c-----------cc-c-CCHHHHHHHHHHHHHhcCCCCEEEEEechhh--C
Confidence 3555677788999999987643 1 10 0 1245688999999999876666554443222 1
Q ss_pred CCCCChHHHHHHHHHhhhhhC-ceEEEEeCCCcccccccCCCchhhHHHH---hhcCCcEEEe-CCC--CH--HHH----
Q 015862 265 SGDSNPEALGLYMAESLNKYG-ILYCHMVEPRMKTREEKSECPHSLLPMR---KAFKGTFLVA-GGY--DR--EDG---- 331 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~G-vd~l~v~~~~~~~~~~~~~~~~~~~~ir---~~~~~pvi~~-Ggi--t~--~~a---- 331 (399)
+....+.++...+.+.+.+.| +||+++--.. ..+..+.+. +.-++.||++ ..+ || ++.
T Consensus 92 G~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~---------~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~ 162 (258)
T 4h3d_A 92 GEKLISRDYYTTLNKEISNTGLVDLIDVELFM---------GDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRL 162 (258)
T ss_dssp CSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG---------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc---------cHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHH
Confidence 112334555666777776666 8999974221 011222222 2234565555 455 44 343
Q ss_pred HHHHHcCCCcEEEech
Q 015862 332 NKAIAEGRADLVVYGR 347 (399)
Q Consensus 332 ~~~L~~G~~D~V~~gR 347 (399)
.++.+.| +|+|=++-
T Consensus 163 ~~~~~~g-aDIvKia~ 177 (258)
T 4h3d_A 163 CRMQELG-ADLPKIAV 177 (258)
T ss_dssp HHHHHTT-CSEEEEEE
T ss_pred HHHHHhC-CCEEEEEE
Confidence 3444555 88776654
No 416
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=91.87 E-value=1.8 Score=38.71 Aligned_cols=94 Identities=9% Similarity=0.094 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHH
Q 015862 234 RFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMR 313 (399)
Q Consensus 234 r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir 313 (399)
.+-.++|+++|+..+..+|.+.+... ..+ + .+++.+.++|+|++.+|.-... .......+.++
T Consensus 44 ~~G~~~i~~lr~~~~~~~i~ld~~l~--------d~p-~---~~~~~~~~aGad~i~vh~~~~~-----~~~~~~~~~~~ 106 (218)
T 3jr2_A 44 AEGMKAVSTLRHNHPNHILVCDMKTT--------DGG-A---ILSRMAFEAGADWITVSAAAHI-----ATIAACKKVAD 106 (218)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEEC--------SCH-H---HHHHHHHHHTCSEEEEETTSCH-----HHHHHHHHHHH
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEeec--------ccH-H---HHHHHHHhcCCCEEEEecCCCH-----HHHHHHHHHHH
Confidence 34478999999986433444433321 112 1 2567788899999998743110 00112344455
Q ss_pred hhcCCcEE--EeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 314 KAFKGTFL--VAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 314 ~~~~~pvi--~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
+. +..++ ..|-.|+++++.+.+.| +|++.+.
T Consensus 107 ~~-g~~~~~d~l~~~T~~~~~~~~~~g-~d~v~~~ 139 (218)
T 3jr2_A 107 EL-NGEIQIEIYGNWTMQDAKAWVDLG-ITQAIYH 139 (218)
T ss_dssp HH-TCEEEEECCSSCCHHHHHHHHHTT-CCEEEEE
T ss_pred Hh-CCccceeeeecCCHHHHHHHHHcC-ccceeee
Confidence 43 55544 44445888888888887 9987653
No 417
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=91.86 E-value=0.63 Score=43.63 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=79.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
++...++++.++ +..+.+.|+|.||+-.-+ +... +....+.+.+..+|+.++.-||
T Consensus 46 l~~~~~~e~~~~----~~~~~~~gaD~VElRvD~------------------l~~~--~~~~~v~~~l~~lr~~~~~~Pi 101 (276)
T 3o1n_A 46 LMGKTITDVKSE----ALAYREADFDILEWRVDH------------------FANV--TTAESVLEAAGAIREIITDKPL 101 (276)
T ss_dssp ECCSSHHHHHHH----HHHHTTSCCSEEEEEGGG------------------CTTT--TCHHHHHHHHHHHHHHCCSSCE
T ss_pred eCCCCHHHHHHH----HHHHhhCCCCEEEEEecc------------------cccc--CcHHHHHHHHHHHHHhcCCCCE
Confidence 444445544443 345556899999976543 2210 1235788999999999865565
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhC-ceEEEEeCCCcccccccCCCchhhHHHHh---hcCCcEEEe-CCC-
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYG-ILYCHMVEPRMKTREEKSECPHSLLPMRK---AFKGTFLVA-GGY- 326 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~G-vd~l~v~~~~~~~~~~~~~~~~~~~~ir~---~~~~pvi~~-Ggi- 326 (399)
.+=++...+ ++....+.++..++.+.+.+.| +|||+|.-.. ..+..+.+.+ .-++.||++ -.+
T Consensus 102 I~T~Rt~~e--GG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~---------~~~~~~~l~~~a~~~~~kvI~S~Hdf~ 170 (276)
T 3o1n_A 102 LFTFRSAKE--GGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT---------GDDEVKATVGYAHQHNVAVIMSNHDFH 170 (276)
T ss_dssp EEECCBGGG--TCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG---------CHHHHHHHHHHHHHTTCEEEEEEEESS
T ss_pred EEEEEEhhh--CCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC---------CHHHHHHHHHHHHhCCCEEEEEeecCC
Confidence 443333111 1112234566778888888888 9999984211 1123333332 245677765 444
Q ss_pred -CH--HHHH----HHHHcCCCcEEEechHH
Q 015862 327 -DR--EDGN----KAIAEGRADLVVYGRLF 349 (399)
Q Consensus 327 -t~--~~a~----~~L~~G~~D~V~~gR~~ 349 (399)
|| ++.. ++.+.| ||+|=++...
T Consensus 171 ~tP~~~el~~~~~~~~~~G-aDIvKia~~a 199 (276)
T 3o1n_A 171 KTPAAEEIVQRLRKMQELG-ADIPKIAVMP 199 (276)
T ss_dssp CCCCHHHHHHHHHHHHHTT-CSEEEEEECC
T ss_pred CCcCHHHHHHHHHHHHHcC-CCEEEEEecC
Confidence 44 3333 344455 8988776554
No 418
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.73 E-value=1.1 Score=43.73 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=34.1
Q ss_pred chhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 306 PHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
++.++.+|+.+++||++-|-.++++|+.+.+.| +|+|.+
T Consensus 218 ~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~G-ad~I~v 256 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRG-ASGIWV 256 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcC-CCEEEE
Confidence 456788999999999887766999999999998 999988
No 419
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=91.72 E-value=0.26 Score=47.57 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=48.4
Q ss_pred HHHHHhhhhhC--ceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 015862 275 LYMAESLNKYG--ILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 275 ~~l~~~Le~~G--vd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 345 (399)
.+.++.+.+.| ++++++... .. .....++.++.+|+.++.|++..|.+ ++++|+.+++.| +|+|.+
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~~-~G---~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aG-ad~Ivv 176 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDIA-HG---HSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAG-ADATKV 176 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEECS-SC---CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECC-CC---CcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEE
Confidence 45677788888 899887432 11 11124567889999997665556655 899999999999 999998
No 420
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=91.71 E-value=1.1 Score=43.44 Aligned_cols=51 Identities=20% Similarity=0.369 Sum_probs=33.2
Q ss_pred hhhHHHHhhcCCcEEEeCCC--CHHHHHHHHHcCCCc------EEEechHHhhCCcHHHH
Q 015862 307 HSLLPMRKAFKGTFLVAGGY--DREDGNKAIAEGRAD------LVVYGRLFLANPDLPRR 358 (399)
Q Consensus 307 ~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D------~V~~gR~~iadPdl~~k 358 (399)
+.++.||+..+.-++.+-|| .-.+.+++++.| +| +|.+||+++.-++..+.
T Consensus 278 ~el~~IR~~~~~~~iLtPGIgaqGGD~~~a~~~G-ad~~~~~~iIvVGR~I~~A~dp~~A 336 (353)
T 2ffc_A 278 DEIKKIRELFPDCYILAPGVGAQKGDLRKMLCNG-YSKNYEKVLINVGRAITKSGSPQQA 336 (353)
T ss_dssp HHHHHHHHHCTTCCEEECCBSTTCBCHHHHHHHH-CCSSGGGEEEEECHHHHTSSCHHHH
T ss_pred HHHHHHHHhCCCCeEEeCcccCCCCCHHHHHHcC-CCcccCcEEEEECHHHcCCCCHHHH
Confidence 45667888776334445555 122355666777 66 99999999987775443
No 421
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=91.64 E-value=1.1 Score=43.98 Aligned_cols=134 Identities=12% Similarity=0.065 Sum_probs=70.3
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcc---cCCCCCCCCch---hhhhHHHHHHHHHHHHHhCCCceEEEecCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQV---NDRTDQYGGSL---ENRCRFALEIVEAVSNEIGADRVGIRLSPF 259 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~---N~R~D~yGGsl---enR~r~~~eii~avR~~vg~~~v~vrls~~ 259 (399)
.+.+..|++||+|+|....- =...++||.. .... .+|-++ -.+..+..|-++.+++.+-..=|.+=-+++
T Consensus 47 ~~li~~Ak~aGAdavKfQ~~---k~~tl~s~~~~~fq~~~-~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpf 122 (385)
T 1vli_A 47 FALIDAAAEAGADAVKFQMF---QADRMYQKDPGLYKTAA-GKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVC 122 (385)
T ss_dssp HHHHHHHHHHTCSEEEECCB---CGGGGTSCCC----------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCC
T ss_pred HHHHHHHHHhCCCEEeeeee---ccCcccCcchhhhccCC-CCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccC
Confidence 44455667899999996543 3455555543 1111 232222 222234455555555555211111111332
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHH---HHHHH
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DRED---GNKAI 335 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~~~L 335 (399)
+. .-++.|++.+++++-|..+.. .+..+++.+.+ ++.||+..-|. |.++ |.+.|
T Consensus 123 ----------D~----~svd~l~~~~vd~~KIgS~~~-------~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i 180 (385)
T 1vli_A 123 ----------DE----GSADLLQSTSPSAFKIASYEI-------NHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTI 180 (385)
T ss_dssp ----------SH----HHHHHHHTTCCSCEEECGGGT-------TCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHH
T ss_pred ----------CH----HHHHHHHhcCCCEEEECcccc-------cCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHH
Confidence 12 224456777899988754422 24556666655 68999988887 7655 55556
Q ss_pred HcCCC-cEEEe
Q 015862 336 AEGRA-DLVVY 345 (399)
Q Consensus 336 ~~G~~-D~V~~ 345 (399)
...++ +++.+
T Consensus 181 ~~~Gn~~iiLl 191 (385)
T 1vli_A 181 RAEGNNQIAIM 191 (385)
T ss_dssp HTTTCCCEEEE
T ss_pred HHCCCCcEEEE
Confidence 65556 65544
No 422
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.64 E-value=0.27 Score=50.23 Aligned_cols=70 Identities=14% Similarity=0.070 Sum_probs=49.5
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
++..+.++.|.++|+|+|-+....-. .....+.++.||+.++ ++||+++-.|.+.++.+++.| +|.|-+|
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~vkVG 350 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEEeec
Confidence 34677888999999999887432110 0113567888999886 555544444999999999999 9988544
No 423
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.62 E-value=0.73 Score=43.65 Aligned_cols=86 Identities=14% Similarity=0.031 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc
Q 015862 237 LEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF 316 (399)
Q Consensus 237 ~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~ 316 (399)
.+-++++|+..+..+|.|-+. +.++..+ ..++|+|.|-+...+ ++.++++.+.+
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd------------tlde~~e----Al~aGaD~I~LDn~~----------~~~l~~av~~i 250 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE------------TLDQLRT----ALAHGARSVLLDNFT----------LDMMRDAVRVT 250 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES------------SHHHHHH----HHHTTCEEEEEESCC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEeC------------CHHHHHH----HHHcCCCEEEECCCC----------HHHHHHHHHHh
Confidence 466777888776435555432 2343222 234699998875431 12333322222
Q ss_pred --CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 015862 317 --KGTFLVAGGYDREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 317 --~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
++++.++||+|++.+.++.+.| +|++++|...
T Consensus 251 ~~~v~ieaSGGI~~~~i~~~a~tG-VD~isvG~lt 284 (298)
T 3gnn_A 251 EGRAVLEVSGGVNFDTVRAIAETG-VDRISIGALT 284 (298)
T ss_dssp TTSEEEEEESSCSTTTHHHHHHTT-CSEEECGGGG
T ss_pred CCCCeEEEEcCCCHHHHHHHHHcC-CCEEEECCee
Confidence 3668999999999999999998 9999999844
No 424
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=91.61 E-value=1.2 Score=41.34 Aligned_cols=149 Identities=12% Similarity=0.052 Sum_probs=82.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
++...+++++ ..+..+.+.|+|.||+-.-+ |.. . .....+.+.+..+|+.++.-||
T Consensus 26 l~~~~~~e~~----~~~~~~~~~~~D~vElRvD~------------------l~~-~-~~~~~v~~~l~~lr~~~~~~Pi 81 (257)
T 2yr1_A 26 VVGEDDRKVL----REAEEVCRKQPDLLEWRADF------------------FRA-I-DDQERVLATANGLRNIAGEIPI 81 (257)
T ss_dssp ECCSSHHHHH----HHHHHHHHSCCSEEEEEGGG------------------CTT-T-TCHHHHHHHHHHHHHHSSSCCE
T ss_pred ecCCCHHHHH----HHHHHHhhcCCCEEEEEeec------------------ccc-c-CcHHHHHHHHHHHHHhccCCCE
Confidence 3344444444 34566788999999977543 111 0 0135678899999999865565
Q ss_pred EEEecCCcccCCCCC-CChHHHHHHHHHhhhhhC-ceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe-CCC--C
Q 015862 253 GIRLSPFANYMESGD-SNPEALGLYMAESLNKYG-ILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA-GGY--D 327 (399)
Q Consensus 253 ~vrls~~~~~~~~~~-~~~~~~~~~l~~~Le~~G-vd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggi--t 327 (399)
.+=++...+ |+.. ..+.++..++.+.+.+.| +|||+|... . .. ......+.. +.-+..||++ ..+ |
T Consensus 82 I~T~Rt~~e--GG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~-~----~~-~~~~l~~~~-~~~~~kvI~S~Hdf~~t 152 (257)
T 2yr1_A 82 LFTIRSERE--GGQPIPLNEAEVRRLIEAICRSGAIDLVDYELA-Y----GE-RIADVRRMT-EECSVWLVVSRHYFDGT 152 (257)
T ss_dssp EEECCCTTT--TCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGG-G----TT-HHHHHHHHH-HHTTCEEEEEEEESSCC
T ss_pred EEEEeeccc--CCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECC-C----Ch-hHHHHHHHH-HhCCCEEEEEecCCCCC
Confidence 444433211 1112 335566778888888888 999998422 1 00 001111112 2235666655 445 4
Q ss_pred H--HHHH----HHHHcCCCcEEEechHHhhCCcH
Q 015862 328 R--EDGN----KAIAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 328 ~--~~a~----~~L~~G~~D~V~~gR~~iadPdl 355 (399)
| ++.. ++.+.| ||+|=++...-..-|.
T Consensus 153 P~~~el~~~~~~~~~~g-aDivKia~~a~s~~D~ 185 (257)
T 2yr1_A 153 PRKETLLADMRQAERYG-ADIAKVAVMPKSPEDV 185 (257)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEEEECCSSHHHH
T ss_pred cCHHHHHHHHHHHHhcC-CCEEEEEeccCCHHHH
Confidence 4 4433 344456 9988777654333343
No 425
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.59 E-value=2.7 Score=39.51 Aligned_cols=84 Identities=10% Similarity=-0.041 Sum_probs=51.5
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCce-EEEEeCCCcccccc-----cC-CCchhhHHHHhhcCCcEEE-
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGIL-YCHMVEPRMKTREE-----KS-ECPHSLLPMRKAFKGTFLV- 322 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd-~l~v~~~~~~~~~~-----~~-~~~~~~~~ir~~~~~pvi~- 322 (399)
++.+-+.. ...+++.+.++.++++|+| +|+++-..-..... .. ...+.++.+|+.+++||++
T Consensus 95 p~~~~i~g----------~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vK 164 (311)
T 1jub_A 95 PIFFSIAG----------MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVK 164 (311)
T ss_dssp CCEEEECC----------SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEE
T ss_pred CEEEEcCC----------CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 67765542 2467789999999999999 98886431110000 00 0134567788888889764
Q ss_pred -eCCCCHHH----HHHHHHcCCCcEEEe
Q 015862 323 -AGGYDRED----GNKAIAEGRADLVVY 345 (399)
Q Consensus 323 -~Ggit~~~----a~~~L~~G~~D~V~~ 345 (399)
..+++.++ |+.+.+.| +|+|.+
T Consensus 165 i~~~~~~~~~~~~a~~~~~~G-~d~i~v 191 (311)
T 1jub_A 165 LPPYFDLVHFDIMAEILNQFP-LTYVNS 191 (311)
T ss_dssp ECCCCSHHHHHHHHHHHTTSC-CCEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcC-CcEEEe
Confidence 34456544 34444455 998765
No 426
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=91.54 E-value=0.62 Score=43.66 Aligned_cols=46 Identities=22% Similarity=0.174 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG 248 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg 248 (399)
.++.|..|.+||+..|-|| .|+++ | ..-.+.....|++++||++++
T Consensus 32 ia~~A~~~~~AGAaivHlH----------------vRd~~-G-~~s~d~~~~~e~~~~IR~~~p 77 (275)
T 3no5_A 32 QVESTQAAFEAGATLVHLH----------------VRNDD-E-TPTSNPDRFALVLEGIRKHAP 77 (275)
T ss_dssp HHHHHHHHHHHTCCEEEEC----------------EECTT-S-CEECCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHccCcEEEEe----------------ecCCC-C-CcCCCHHHHHHHHHHHHHhCC
Confidence 3889999999999999999 46666 4 233357788999999999984
No 427
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=91.51 E-value=0.65 Score=43.17 Aligned_cols=90 Identities=11% Similarity=-0.005 Sum_probs=56.4
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-----------------CchhhHHHHhh-cCCcEEEeCCCC----
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-----------------CPHSLLPMRKA-FKGTFLVAGGYD---- 327 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-----------------~~~~~~~ir~~-~~~pvi~~Ggit---- 327 (399)
+.+...++++.|++.|+|+||+.-|...+....+. ..+.++.+|+. +++||+.-+-++
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~ 108 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFN 108 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHH
Confidence 35678899999999999999996653221111100 12457789998 789987644223
Q ss_pred ---HHHHHHHHHcCCCcEEEechHHhhCC-cHHHHHH
Q 015862 328 ---REDGNKAIAEGRADLVVYGRLFLANP-DLPRRFE 360 (399)
Q Consensus 328 ---~~~a~~~L~~G~~D~V~~gR~~iadP-dl~~k~~ 360 (399)
...++.+.+.| +|.|.+--....+. .+.+.++
T Consensus 109 ~g~~~~~~~~~~aG-adgii~~d~~~e~~~~~~~~~~ 144 (268)
T 1qop_A 109 NGIDAFYARCEQVG-VDSVLVADVPVEESAPFRQAAL 144 (268)
T ss_dssp TCHHHHHHHHHHHT-CCEEEETTCCGGGCHHHHHHHH
T ss_pred hhHHHHHHHHHHcC-CCEEEEcCCCHHHHHHHHHHHH
Confidence 24567778887 99777753333322 3444444
No 428
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=91.48 E-value=0.19 Score=61.45 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=39.0
Q ss_pred HHHHhhcCCcEEEeCCC-CHHHHHHHH-----------HcCCCcEEEechHHhhCC
Q 015862 310 LPMRKAFKGTFLVAGGY-DREDGNKAI-----------AEGRADLVVYGRLFLANP 353 (399)
Q Consensus 310 ~~ir~~~~~pvi~~Ggi-t~~~a~~~L-----------~~G~~D~V~~gR~~iadP 353 (399)
..||+.+++||++.||| |++++..+| .-| +|.|.||..+++-+
T Consensus 599 ~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lG-AdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 599 SELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMP-IDGILVGTAAMATL 653 (3089)
T ss_dssp HHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCC-CSEEECSSTTTTCT
T ss_pred HHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCC-CCEEEecHHHHhCc
Confidence 66788889999999999 999999999 777 99999999999765
No 429
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.45 E-value=5.2 Score=37.28 Aligned_cols=135 Identities=19% Similarity=0.168 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh---CCC-ceEEEecCC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI---GAD-RVGIRLSPF 259 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v---g~~-~v~vrls~~ 259 (399)
+..+.+++..++|+.||.|-.+-+ + -|..+-..- -..+.|++++++. |.+ .|.-|.-..
T Consensus 93 ~~~~~v~~l~~aGaagv~iED~~~--------~--------~~k~l~~~~-e~~~~I~aa~~a~~~~g~~~~i~aRtda~ 155 (275)
T 2ze3_A 93 DVRRTVEHFAALGVAGVNLEDATG--------L--------TPTELYDLD-SQLRRIEAARAAIDASGVPVFLNARTDTF 155 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCS--------S--------SSSCBCCHH-HHHHHHHHHHHHHHHHTSCCEEEEECCTT
T ss_pred HHHHHHHHHHHcCCcEEEECCCcC--------C--------CCCccCCHH-HHHHHHHHHHHhHhhcCCCeEEEEechhh
Confidence 346777788889999999987642 1 022333222 2345566666653 544 345555331
Q ss_pred cccCCCCC--CChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCC--C-CHHHHHHH
Q 015862 260 ANYMESGD--SNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGG--Y-DREDGNKA 334 (399)
Q Consensus 260 ~~~~~~~~--~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg--i-t~~~a~~~ 334 (399)
..+.+. .+..+++++-++.++++|+|.|-+... +..+.++.|.+.+++|+..+.+ . |. +++
T Consensus 156 --~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~~~~~~~~~---~eL 221 (275)
T 2ze3_A 156 --LKGHGATDEERLAETVRRGQAYADAGADGIFVPLA---------LQSQDIRALADALRVPLNVMAFPGSPVP---RAL 221 (275)
T ss_dssp --TTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC---------CCHHHHHHHHHHCSSCEEEECCTTSCCH---HHH
T ss_pred --hccccccchhhHHHHHHHHHHHHHCCCCEEEECCC---------CCHHHHHHHHHhcCCCEEEecCCCCCCH---HHH
Confidence 111000 014678899999999999998875321 2346788899999999765533 2 44 444
Q ss_pred HHcCCCcEEEechHHh
Q 015862 335 IAEGRADLVVYGRLFL 350 (399)
Q Consensus 335 L~~G~~D~V~~gR~~i 350 (399)
-+-| +.+|.++-.++
T Consensus 222 ~~lG-v~~v~~~~~~~ 236 (275)
T 2ze3_A 222 LDAG-AARVSFGQSLM 236 (275)
T ss_dssp HHTT-CSEEECTTHHH
T ss_pred HHcC-CcEEEEChHHH
Confidence 4556 89999876644
No 430
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=91.21 E-value=1.3 Score=41.73 Aligned_cols=154 Identities=19% Similarity=0.135 Sum_probs=86.4
Q ss_pred HHHHHHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+. .+.- + -..|--.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 25 ~~sA~~~~~aG~~ai~vs~~~~a~~----~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~PviaD~d~------ 84 (290)
T 2hjp_A 25 PLVAKLAEQAGFGGIWGSGFELSAS----Y-----AVPDANILSMS----THLEMMRAIASTVS-IPLIADIDT------ 84 (290)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHH----T-----TSCTTTCSCHH----HHHHHHHHHHTTCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEEChHHHHHh----C-----CCCCCCCCCHH----HHHHHHHHHHhcCC-CCEEEECCC------
Confidence 66788899999999998742 2211 0 11221011222 23455555555553 267665532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc----c----ccCCCchhhHHHHh---hc-CCcEEEeCCC------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR----E----EKSECPHSLLPMRK---AF-KGTFLVAGGY------ 326 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~----~----~~~~~~~~~~~ir~---~~-~~pvi~~Ggi------ 326 (399)
|.+ ..+.+.+.++.|+++|++.+++-.....+. . .-.+..+.+.+|+. +- ..+++..++-
T Consensus 85 -Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~ 162 (290)
T 2hjp_A 85 -GFG-NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAG 162 (290)
T ss_dssp -TTS-SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTT
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhcc
Confidence 223 456788899999999999999865432110 0 01112234555553 32 2334444432
Q ss_pred -----CHHHHHHHHHcCCCcEEEechHH-hhCCcHHHHHHhCCC
Q 015862 327 -----DREDGNKAIAEGRADLVVYGRLF-LANPDLPRRFELNAP 364 (399)
Q Consensus 327 -----t~~~a~~~L~~G~~D~V~~gR~~-iadPdl~~k~~~g~~ 364 (399)
..+++..+.+.| ||.|.+ .. +.+++..+++.+...
T Consensus 163 ~g~~~ai~Ra~ay~eAG-Ad~i~~--e~~~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 163 LGQQEAVRRGQAYEEAG-ADAILI--HSRQKTPDEILAFVKSWP 203 (290)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEE--CCCCSSSHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHHHHcC-CcEEEe--CCCCCCHHHHHHHHHHcC
Confidence 134456666777 999988 33 477788888877544
No 431
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.17 E-value=0.44 Score=46.63 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=58.0
Q ss_pred HHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCC-cccccccCC----CchhhHHHHhh
Q 015862 241 EAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPR-MKTREEKSE----CPHSLLPMRKA 315 (399)
Q Consensus 241 ~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~-~~~~~~~~~----~~~~~~~ir~~ 315 (399)
+.+|+..++.++.--++... .. +..+.+.+.+.++.+ ++|+..||+.... ...+..... .++.++.+++.
T Consensus 111 ~~vr~~ap~~~~~anlg~~q-l~---~~~~~~~~~~av~~~-~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~ 185 (368)
T 3vkj_A 111 AIVRKVAPTIPIIANLGMPQ-LV---KGYGLKEFQDAIQMI-EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKE 185 (368)
T ss_dssp HHHHHHCSSSCEEEEEEGGG-GG---TTCCHHHHHHHHHHT-TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTT
T ss_pred HHHHHhCcCcceecCcCeee-cC---CCCCHHHHHHHHHHh-cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHH
Confidence 33555544335554444311 11 112456666666666 5566666653110 001111111 34567888999
Q ss_pred cCCcEEE---eCCCCHHHHHHHHHcCCCcEEEe
Q 015862 316 FKGTFLV---AGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 316 ~~~pvi~---~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
+++||++ ++++++++|+.+.+.| +|+|.+
T Consensus 186 ~~vPVivK~vG~g~s~~~A~~l~~aG-ad~I~V 217 (368)
T 3vkj_A 186 LSVPIIVKESGNGISMETAKLLYSYG-IKNFDT 217 (368)
T ss_dssp CSSCEEEECSSSCCCHHHHHHHHHTT-CCEEEC
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhCC-CCEEEE
Confidence 9999988 3456999999999998 999987
No 432
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.17 E-value=1.1 Score=43.36 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcc---cCCCCCCCCc---hhhhhHHHHHHHHHHHHHhCCCceEEEecC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQV---NDRTDQYGGS---LENRCRFALEIVEAVSNEIGADRVGIRLSP 258 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~---N~R~D~yGGs---lenR~r~~~eii~avR~~vg~~~v~vrls~ 258 (399)
..+.+..|+++|+|+|....- =...++||.. ..+. . |-+ +-.+..+..|-++.+++.+-..=|.+=-++
T Consensus 37 a~~li~~ak~aGadavKfq~~---k~~tl~s~~~~~fq~~~-~-~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~ 111 (349)
T 2wqp_A 37 AFEMVDAAYNAGAEVVKHQTH---IVEDEMSDEAKQVIPGN-A-DVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL 111 (349)
T ss_dssp HHHHHHHHHHHTCSEEEEEEC---CHHHHCCGGGGGCCCTT-C-SSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEeeeec---ccccccCcchhccccCC-C-CccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee
Confidence 345556678899999996532 2344444433 1111 1 212 233444555666666665521111111133
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHH---HHHH
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DRED---GNKA 334 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~~~ 334 (399)
++ . .-++.|++.|+|++-|..+.. .+..+++.+.+ ++.||+..-|. |.++ |.+.
T Consensus 112 ~d----------~----~svd~l~~~~v~~~KI~S~~~-------~n~~LL~~va~-~gkPviLstGmat~~Ei~~Ave~ 169 (349)
T 2wqp_A 112 FS----------R----AAALRLQRMDIPAYKIGSGEC-------NNYPLIKLVAS-FGKPIILSTGMNSIESIKKSVEI 169 (349)
T ss_dssp CS----------H----HHHHHHHHHTCSCEEECGGGT-------TCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHH
T ss_pred CC----------H----HHHHHHHhcCCCEEEECcccc-------cCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHH
Confidence 21 1 123456678899988854422 24456666655 68999988887 7665 4444
Q ss_pred HHcCCCcEEEechHHhhCC
Q 015862 335 IAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 335 L~~G~~D~V~~gR~~iadP 353 (399)
|...+++++.+ ...-.-|
T Consensus 170 i~~~G~~iiLl-hc~s~Yp 187 (349)
T 2wqp_A 170 IREAGVPYALL-HCTNIYP 187 (349)
T ss_dssp HHHHTCCEEEE-ECCCCSS
T ss_pred HHHcCCCEEEE-eccCCCC
Confidence 54433576655 4433333
No 433
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=91.00 E-value=0.97 Score=43.99 Aligned_cols=90 Identities=20% Similarity=0.168 Sum_probs=58.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-
Q 015862 172 RLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD- 250 (399)
Q Consensus 172 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~- 250 (399)
.+..+.++++++. ..+.|.|||-+.+.-|- |. -=|.+.|.+++..+++ +++..
T Consensus 76 ~ID~~al~~lv~~-------li~~Gv~Gl~v~GTTGE----~~-----------~Ls~eEr~~vi~~~ve----~~~grv 129 (360)
T 4dpp_A 76 RFDLEAYDDLVNI-------QIQNGAEGVIVGGTTGE----GQ-----------LMSWDEHIMLIGHTVN----CFGGSI 129 (360)
T ss_dssp SBCHHHHHHHHHH-------HHHTTCCEEEESSTTTT----GG-----------GSCHHHHHHHHHHHHH----HHTTTS
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEecccccC----hh-----------hCCHHHHHHHHHHHHH----HhCCCC
Confidence 3555555555554 46799999998876541 11 1245677655554444 44333
Q ss_pred ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc
Q 015862 251 RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK 297 (399)
Q Consensus 251 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~ 297 (399)
+|.+=++ ..+..+++++++..++.|+|.+-+..|.+.
T Consensus 130 pViaGvg----------~~st~eai~la~~A~~~Gadavlvv~PyY~ 166 (360)
T 4dpp_A 130 KVIGNTG----------SNSTREAIHATEQGFAVGMHAALHINPYYG 166 (360)
T ss_dssp EEEEECC----------CSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred eEEEecC----------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 5655333 335678999999999999999988777553
No 434
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=90.91 E-value=1.6 Score=42.26 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=35.3
Q ss_pred CchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 305 CPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
.|+.++.+|+.+++||++-|-.++++|+.+++.| +|+|.+
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~G-aD~I~v 244 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGILTKEDAELAMKHN-VQGIVV 244 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEE
Confidence 4567889999999999888777999999999998 999977
No 435
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.87 E-value=3.1 Score=38.43 Aligned_cols=134 Identities=13% Similarity=0.115 Sum_probs=81.8
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHh---CCC-ceEEEecCCcc
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI---GAD-RVGIRLSPFAN 261 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~v---g~~-~v~vrls~~~~ 261 (399)
.+.+++..++|++||.|-.+.. + . |..+-.. .-..+.|++++++. |.+ .|.-|....
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~-~------------~---~k~l~~~-~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~-- 156 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVH-S------------E---GKRVREA-QEHADYIAAARQAADVAGVDVVINGRTDAV-- 156 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEG-G------------G---TTEECCH-HHHHHHHHHHHHHHHHHTCCCEEEEEECHH--
T ss_pred HHHHHHHHHcCCcEEEECCCCC-C------------C---CCcccCH-HHHHHHHHHHHHHHHhcCCCeEEEEEechh--
Confidence 5677778889999999987641 0 0 2222211 23356666666653 444 356666431
Q ss_pred cCCCCC-CChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEe--CCC-CHH-HHHHHHH
Q 015862 262 YMESGD-SNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVA--GGY-DRE-DGNKAIA 336 (399)
Q Consensus 262 ~~~~~~-~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~--Ggi-t~~-~a~~~L~ 336 (399)
..+.+. .+..+++++-++.++++|+|.|-+... +..+.++.|.+.+++|+..+ .+. ||. ..+++-+
T Consensus 157 ~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~ 227 (255)
T 2qiw_A 157 KLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL---------STAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAG 227 (255)
T ss_dssp HHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC---------CSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHH
T ss_pred hccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC---------CCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHH
Confidence 111110 124788899999999999998876321 23467888999999995544 222 332 3445555
Q ss_pred cCCCcEEEechH
Q 015862 337 EGRADLVVYGRL 348 (399)
Q Consensus 337 ~G~~D~V~~gR~ 348 (399)
-| +..|+++-.
T Consensus 228 lG-v~~v~~~~~ 238 (255)
T 2qiw_A 228 LG-VRRVTFGPL 238 (255)
T ss_dssp TT-CCEEECTTH
T ss_pred cC-CCEEEEHHH
Confidence 56 999998865
No 436
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=90.86 E-value=3.1 Score=40.68 Aligned_cols=134 Identities=17% Similarity=0.158 Sum_probs=82.2
Q ss_pred HHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCC
Q 015862 190 RNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSN 269 (399)
Q Consensus 190 ~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~ 269 (399)
++|.++|.|.|.|-.+- | .-++. .++-+.+.-.+.+.+.++.+|+.-+ .+-++++..+- ...
T Consensus 81 ~~a~~~g~~~v~i~~~~--------s--~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~--~~~v~~~~ed~-----~~~ 142 (382)
T 2ztj_A 81 KVAVETGVQGIDLLFGT--------S--KYLRA-PHGRDIPRIIEEAKEVIAYIREAAP--HVEVRFSAEDT-----FRS 142 (382)
T ss_dssp HHHHHTTCSEEEEEECC-------------------CCCHHHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-----TTS
T ss_pred HHHHHcCCCEEEEEecc--------C--HHHHH-HhCCCHHHHHHHHHHHHHHHHHcCC--CEEEEEEEEeC-----CCC
Confidence 56778999998875432 2 23556 7777777767778888888888632 24566665321 234
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhh--cCCcEEEeC--CC--CHHHHHHHHHcCCCcEE
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKA--FKGTFLVAG--GY--DREDGNKAIAEGRADLV 343 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~--~~~pvi~~G--gi--t~~~a~~~L~~G~~D~V 343 (399)
+.+...++++.+.++ ++.|.+.... +- ..+....+.++.+++. .++|+-.=. .+ -...+..+++.| ||.|
T Consensus 143 ~~~~~~~~~~~~~~~-a~~i~l~DT~-G~-~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aG-a~~v 218 (382)
T 2ztj_A 143 EEQDLLAVYEAVAPY-VDRVGLADTV-GV-ATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAG-ATHV 218 (382)
T ss_dssp CHHHHHHHHHHHGGG-CSEEEEEETT-SC-CCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred CHHHHHHHHHHHHHh-cCEEEecCCC-CC-CCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhC-CCEE
Confidence 577889999999999 9998875321 10 0111123466778887 456643221 22 366778899998 8877
Q ss_pred Ee
Q 015862 344 VY 345 (399)
Q Consensus 344 ~~ 345 (399)
-.
T Consensus 219 d~ 220 (382)
T 2ztj_A 219 DT 220 (382)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 437
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=90.49 E-value=0.92 Score=42.66 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=71.2
Q ss_pred ceEEEecCCcc-cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-------CchhhHHHHhhcCCcEEE
Q 015862 251 RVGIRLSPFAN-YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-------CPHSLLPMRKAFKGTFLV 322 (399)
Q Consensus 251 ~v~vrls~~~~-~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-------~~~~~~~ir~~~~~pvi~ 322 (399)
.+++ ||...+ |.+.+...+.+.+.+.++.+.+.|+|+|.|..-+..+...... ....++.+++.+++|| .
T Consensus 17 imGi-lN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~pi-S 94 (282)
T 1aj0_A 17 VMGI-LNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWI-S 94 (282)
T ss_dssp EEEE-EECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEE-E
T ss_pred EEEE-EeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeE-E
Confidence 3566 665332 2333334567888999999999999999996522111000000 1234556666667775 4
Q ss_pred eCCCCHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 323 AGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 323 ~Ggit~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
.--+.++.++.+|+.| +|+|==..+. .||+...-+++
T Consensus 95 IDT~~~~va~aAl~aG-a~iINdvsg~-~d~~~~~~~a~ 131 (282)
T 1aj0_A 95 VDTSKPEVIRESAKVG-AHIINDIRSL-SEPGALEAAAE 131 (282)
T ss_dssp EECCCHHHHHHHHHTT-CCEEEETTTT-CSTTHHHHHHH
T ss_pred EeCCCHHHHHHHHHcC-CCEEEECCCC-CCHHHHHHHHH
Confidence 4556799999999998 9999888887 89988776554
No 438
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=90.47 E-value=3.2 Score=36.96 Aligned_cols=63 Identities=13% Similarity=-0.011 Sum_probs=41.1
Q ss_pred CceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhh
Q 015862 285 GILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLA 351 (399)
Q Consensus 285 Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ia 351 (399)
.+|++-+.... + .......|..++.+. ..+.|++..||++|+...++|.-+ ++.|-+..++=.
T Consensus 117 ~~d~~LlD~~~-g-GtG~~fdW~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~-p~gVDvsSGvE~ 179 (203)
T 1v5x_A 117 PAQALLLDGKR-P-GSGEAYPRAWAKPLL-ATGRRVILAGGIAPENLEEVLALR-PYALDLASGVEE 179 (203)
T ss_dssp SCSEEEEECSS-T-TSCCCCCGGGGHHHH-HTTSCEEECSSCCSTTHHHHHHHC-CSEEEESGGGEE
T ss_pred CCCEEEEcCCC-C-CCCCccCHHHHHhhh-ccCCcEEEECCCCHHHHHHHHhcC-CCEEEeCCceec
Confidence 37877665432 1 112233555555421 246799999999999998887434 889988888764
No 439
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=90.42 E-value=0.49 Score=42.60 Aligned_cols=79 Identities=13% Similarity=0.102 Sum_probs=59.0
Q ss_pred HHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 015862 272 ALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 272 ~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~i 350 (399)
+++.++++.+.+.|++.+.+.... ....+.++.+++.++..++..|-+ +.++++.+++.| +|+|..+-
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aG-Ad~v~~p~--- 96 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG-AQFAISPG--- 96 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHT-CSCEEESS---
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcC-CCEEEcCC---
Confidence 457789999999999999986431 112346677888887666666767 899999999999 99999873
Q ss_pred hCCcHHHHHHh
Q 015862 351 ANPDLPRRFEL 361 (399)
Q Consensus 351 adPdl~~k~~~ 361 (399)
.|++..+..+.
T Consensus 97 ~d~~v~~~~~~ 107 (214)
T 1wbh_A 97 LTEPLLKAATE 107 (214)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 57766555443
No 440
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=90.41 E-value=0.94 Score=42.32 Aligned_cols=81 Identities=11% Similarity=0.024 Sum_probs=54.3
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC------------------CchhhHHHHhh-cCCcEEEeCCCC---
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE------------------CPHSLLPMRKA-FKGTFLVAGGYD--- 327 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~------------------~~~~~~~ir~~-~~~pvi~~Ggit--- 327 (399)
+.+.+.++++.|++.|+|+|++.-|. +.+..+.+ ..+.++.+|+. .++|++.-+-++
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPf-SDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~ 110 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPF-SDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVY 110 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCC-CCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 46778999999999999999997663 33322111 12456778877 789987765433
Q ss_pred ---HH-HHHHHHHcCCCcEEEechHHhhC
Q 015862 328 ---RE-DGNKAIAEGRADLVVYGRLFLAN 352 (399)
Q Consensus 328 ---~~-~a~~~L~~G~~D~V~~gR~~iad 352 (399)
.+ .++.+.+.| +|.|.+.---+.+
T Consensus 111 ~~g~~~f~~~~~~aG-vdGvIipDlp~ee 138 (271)
T 3nav_A 111 ARGIDDFYQRCQKAG-VDSVLIADVPTNE 138 (271)
T ss_dssp HTCHHHHHHHHHHHT-CCEEEETTSCGGG
T ss_pred HHhHHHHHHHHHHCC-CCEEEECCCCHHH
Confidence 23 366777887 9998875433333
No 441
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=90.35 E-value=0.31 Score=43.01 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=46.4
Q ss_pred HHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCC
Q 015862 276 YMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLFLANP 353 (399)
Q Consensus 276 ~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~iadP 353 (399)
.-++.++....|++++-.+. -.++.++.+ +++|+|++|.+ |.|++++ |+.| +|.|+-+..-+.+-
T Consensus 119 ~~~~~I~~~kPD~iEiLPg~--------v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aG-A~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 119 RGIEQIETLGVDVVEVLPGA--------VAPKVARKI---PGRTVIAAGLVETEEEARE-ILKH-VSAISTSSRILWKM 184 (188)
T ss_dssp HHHHHHHHHTCSEEEEESGG--------GHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTT-SSEEEECCHHHHTC
T ss_pred hhhhhccccCCCeEeecCCC--------chHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCC-CeEEEeCCHHHhCC
Confidence 34555666778888875211 012333334 68899999999 9999999 9999 99999988776553
No 442
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.25 E-value=4.1 Score=35.72 Aligned_cols=108 Identities=10% Similarity=-0.032 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHh
Q 015862 235 FALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRK 314 (399)
Q Consensus 235 ~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~ 314 (399)
+-.++|+++|+....-+|.+-+-. .+..+ .+++.+.++|+|++.++.... ........+.+++
T Consensus 39 ~g~~~i~~ir~~~~~~~i~~~~~~---------~~~~~---~~~~~~~~~Gad~v~v~~~~~-----~~~~~~~~~~~~~ 101 (211)
T 3f4w_A 39 EGVNAIKAIKEKYPHKEVLADAKI---------MDGGH---FESQLLFDAGADYVTVLGVTD-----VLTIQSCIRAAKE 101 (211)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEE---------CSCHH---HHHHHHHHTTCSEEEEETTSC-----HHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCCCEEEEEEEe---------ccchH---HHHHHHHhcCCCEEEEeCCCC-----hhHHHHHHHHHHH
Confidence 336899999998543355432211 01122 357777889999999864311 0001223444554
Q ss_pred hcCCcEEEe-CCC-CH-HHHHHHHHcCCCcEEEechHHh------hCCcHHHHHHh
Q 015862 315 AFKGTFLVA-GGY-DR-EDGNKAIAEGRADLVVYGRLFL------ANPDLPRRFEL 361 (399)
Q Consensus 315 ~~~~pvi~~-Ggi-t~-~~a~~~L~~G~~D~V~~gR~~i------adPdl~~k~~~ 361 (399)
.+.+++.. -.. |+ +.++.+++.| +|+|.+..++- ..++..+++++
T Consensus 102 -~g~~~~v~~~~~~t~~~~~~~~~~~g-~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 102 -AGKQVVVDMICVDDLPARVRLLEEAG-ADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp -HTCEEEEECTTCSSHHHHHHHHHHHT-CCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred -cCCeEEEEecCCCCHHHHHHHHHHcC-CCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 36665542 233 54 6688889988 99998753321 13456667765
No 443
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=90.24 E-value=0.56 Score=43.49 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=51.3
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-----------------CchhhHHHHhhc-CCcEEEeCCCCH---
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-----------------CPHSLLPMRKAF-KGTFLVAGGYDR--- 328 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-----------------~~~~~~~ir~~~-~~pvi~~Ggit~--- 328 (399)
+.+++.++++.|++.|+|.|++.-|...+....+. ..+.++.+|+.+ ++|++.-+-+++
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~ 108 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFR 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHH
Confidence 45778999999999999999996553221111100 124577889888 899888654443
Q ss_pred ----HHHHHHHHcCCCcEEEec
Q 015862 329 ----EDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 329 ----~~a~~~L~~G~~D~V~~g 346 (399)
..++.+.+.| +|.|.+.
T Consensus 109 ~g~~~f~~~~~~aG-~dgvii~ 129 (262)
T 2ekc_A 109 IGLEKFCRLSREKG-IDGFIVP 129 (262)
T ss_dssp HCHHHHHHHHHHTT-CCEEECT
T ss_pred hhHHHHHHHHHHcC-CCEEEEC
Confidence 3456677777 9988774
No 444
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.17 E-value=3.1 Score=39.16 Aligned_cols=155 Identities=14% Similarity=0.040 Sum_probs=88.2
Q ss_pred HHHHHHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+. .+. ..+ =..|--.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 31 ~~sA~i~e~aGf~ai~vs~s~~a~---~~l-----G~pD~~~vt~~----em~~~~~~I~r~~~-~PviaD~d~------ 91 (287)
T 3b8i_A 31 PMSARIAADLGFECGILGGSVASL---QVL-----AAPDFALITLS----EFVEQATRIGRVAR-LPVIADADH------ 91 (287)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH---HHH-----SCCSSSCSCHH----HHHHHHHHHHTTCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEeCcHHHHH---Hhc-----CCCCCCCCCHH----HHHHHHHHHHhcCC-CCEEEECCC------
Confidence 66788999999999997754 221 000 11221111222 23444555555543 267665532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc-----cccCCCchhhHHHHhhc----CCcEEEeCCC---------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR-----EEKSECPHSLLPMRKAF----KGTFLVAGGY--------- 326 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~-----~~~~~~~~~~~~ir~~~----~~pvi~~Ggi--------- 326 (399)
|.+ ..+++.+.++.|+++|++.+++-....... ..-.+..+.+.+|+..+ ...++.+++-
T Consensus 92 -Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ 169 (287)
T 3b8i_A 92 -GYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDA 169 (287)
T ss_dssp -CSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHH
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHH
Confidence 223 456788889999999999999865432110 00111123455555443 2233333332
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 327 DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 327 t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
..++|..+.+.| ||.|.+= .+.+++..+++.+...
T Consensus 170 ai~Ra~ay~eAG-Ad~i~~e--~~~~~~~~~~i~~~~~ 204 (287)
T 3b8i_A 170 VIQRTLAYQEAG-ADGICLV--GVRDFAHLEAIAEHLH 204 (287)
T ss_dssp HHHHHHHHHHTT-CSEEEEE--CCCSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcC-CCEEEec--CCCCHHHHHHHHHhCC
Confidence 245566777777 9999884 3567788999888654
No 445
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.17 E-value=0.37 Score=48.93 Aligned_cols=68 Identities=13% Similarity=0.037 Sum_probs=49.5
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
..+.++.|.++|+|+|.+....-. .....+.++.+|+.+ ++||++.+..|++.|+.+++.| +|+|.+|
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aG-aD~I~vg 298 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGH----SKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAG-ADAVKVG 298 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCS----BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred hHHHHHHHhhcccceEEecccCCc----chhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcC-CCEEEEC
Confidence 455677888889999988643110 112346788899998 5677774444999999999998 9999874
No 446
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=89.91 E-value=0.85 Score=41.72 Aligned_cols=139 Identities=8% Similarity=0.002 Sum_probs=75.0
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
.+.+..+.+.|+|.||+-.-+ |... ....+.+.+..+|+..+.-||.+=++...+ |+
T Consensus 20 ~~~~~~~~~~~~D~vElRvD~------------------l~~~---~~~~v~~~~~~lr~~~~~~PiI~T~R~~~e--GG 76 (238)
T 1sfl_A 20 LIQKINHRIDAIDVLELRIDQ------------------FENV---TVDQVAEMITKLKVMQDSFKLLVTYRTKLQ--GG 76 (238)
T ss_dssp HHHHHHHTTTTCSEEEEECTT------------------STTC---CHHHHHHHHHHHC---CCSEEEEECCBGGG--TS
T ss_pred HHHHHHhhhcCCCEEEEEecc------------------cccC---CHHHHHHHHHHHHHhccCCCEEEEeecccc--CC
Confidence 455677788899999976543 2211 135678899999998865565444433211 11
Q ss_pred CCCChHHHHHHHHHhhhhh-CceEEEEeCCCcccccccCCCchhhHHHHh---hcCCcEEEe-CCC--CH--HHHHHH--
Q 015862 266 GDSNPEALGLYMAESLNKY-GILYCHMVEPRMKTREEKSECPHSLLPMRK---AFKGTFLVA-GGY--DR--EDGNKA-- 334 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~-Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~---~~~~pvi~~-Ggi--t~--~~a~~~-- 334 (399)
....+.++..++.+.+.+. ++|||+|..... ...+..+.+.+ .-+..||++ ..+ || ++....
T Consensus 77 ~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~ 149 (238)
T 1sfl_A 77 YGQFTNDSYLNLISDLANINGIDMIDIEWQAD-------IDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFF 149 (238)
T ss_dssp CBCCCHHHHHHHHHHGGGCTTCCEEEEECCTT-------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCEEEEEccCC-------CChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHH
Confidence 1233456677777777766 699999853210 00112222221 234556655 445 54 444433
Q ss_pred --HHcCCCcEEEechHHhhCCcH
Q 015862 335 --IAEGRADLVVYGRLFLANPDL 355 (399)
Q Consensus 335 --L~~G~~D~V~~gR~~iadPdl 355 (399)
.+.| ||+|=++...-.--|.
T Consensus 150 ~~~~~g-aDivKia~~a~~~~D~ 171 (238)
T 1sfl_A 150 KMQKFN-PEYVKLAVMPHNKNDV 171 (238)
T ss_dssp HHHTTC-CSEEEEEECCSSHHHH
T ss_pred HHHHcC-CCEEEEEecCCCHHHH
Confidence 3355 8988777654333343
No 447
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=89.83 E-value=16 Score=35.76 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=115.6
Q ss_pred CccccCCeeeCC-c--eeeCCCCCCCCCCCCCCHHHHHHHHhhcC--CCcEEEEcccccCCCCCCCCCCCCCCCHHHHhh
Q 015862 34 TPYKMGNFNLSH-R--VVLAPLTRQRSYNNVPQPHAILYYSQRTT--KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEA 108 (399)
Q Consensus 34 ~P~~ig~~~lkN-R--iv~apm~~~~~~~G~~t~~~~~~y~~~a~--g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~ 108 (399)
+.++||++.+-+ + ++.+|.+.. +.....-|.+.++ |+-+|..... .|....+..+ ++ ..++
T Consensus 129 t~i~i~~~~iG~~~~~~Iigpcsve-------s~e~a~~~a~~~k~aGa~~vk~q~f--kprts~~~f~-gl----~~eg 194 (385)
T 3nvt_A 129 TIVTVKGLPIGNGEPVFVFGPCSVE-------SYEQVAAVAESIKAKGLKLIRGGAF--KPRTSPYDFQ-GL----GLEG 194 (385)
T ss_dssp CCEEETTEEETSSSCEEEEECSBCC-------CHHHHHHHHHHHHHTTCCEEECBSS--CCCSSTTSCC-CC----THHH
T ss_pred cEEEECCEEECCCCeEEEEEeCCcC-------CHHHHHHHHHHHHHcCCCeEEcccc--cCCCChHhhc-CC----CHHH
Confidence 446778777664 2 555665442 4444444555554 6665655543 2221111111 12 1378
Q ss_pred hHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHH
Q 015862 109 WKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLA 188 (399)
Q Consensus 109 ~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~a 188 (399)
++.+.+.+++.|..++.-.+.. ..
T Consensus 195 l~~L~~~~~~~Gl~~~te~~d~--------------------------------------------------------~~ 218 (385)
T 3nvt_A 195 LKILKRVSDEYGLGVISEIVTP--------------------------------------------------------AD 218 (385)
T ss_dssp HHHHHHHHHHHTCEEEEECCSG--------------------------------------------------------GG
T ss_pred HHHHHHHHHHcCCEEEEecCCH--------------------------------------------------------HH
Confidence 8889999999998888555320 01
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
+..+.+. .|.++|-++. ..| .++++++.+ .| .||.++-+. .
T Consensus 219 ~~~l~~~-vd~lkIgs~~----------------------~~n-----~~LL~~~a~-~g-kPVilk~G~---------~ 259 (385)
T 3nvt_A 219 IEVALDY-VDVIQIGARN----------------------MQN-----FELLKAAGR-VD-KPILLKRGL---------S 259 (385)
T ss_dssp HHHHTTT-CSEEEECGGG----------------------TTC-----HHHHHHHHT-SS-SCEEEECCT---------T
T ss_pred HHHHHhh-CCEEEECccc----------------------ccC-----HHHHHHHHc-cC-CcEEEecCC---------C
Confidence 1122334 8899987654 111 255555543 23 288887654 2
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeC-CC--cccccccCCCchhhHHHHhhcCCcEEEeC----CC-C--HHHHHHHHHcC
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVE-PR--MKTREEKSECPHSLLPMRKAFKGTFLVAG----GY-D--REDGNKAIAEG 338 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~-~~--~~~~~~~~~~~~~~~~ir~~~~~pvi~~G----gi-t--~~~a~~~L~~G 338 (399)
.+.++....++.+.+.|..-+.+.. +. +........++..+..+|+.++.||+..- |- . +..+..+++-|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~G 339 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIE 339 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhC
Confidence 3577788888888888854333333 22 22111122345567788998999986541 21 1 35678899998
Q ss_pred CCcEEEech
Q 015862 339 RADLVVYGR 347 (399)
Q Consensus 339 ~~D~V~~gR 347 (399)
+|++++=+
T Consensus 340 -A~gl~iE~ 347 (385)
T 3nvt_A 340 -ADGVMAEV 347 (385)
T ss_dssp -CSEEEEEB
T ss_pred -CCEEEEEe
Confidence 99777755
No 448
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=89.77 E-value=3.5 Score=39.01 Aligned_cols=155 Identities=19% Similarity=0.159 Sum_probs=84.7
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMES 265 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~ 265 (399)
+-.|+.+.++|||+|-+.+.. +-... .-..|.-.=+++ -++..+++|++....-||.+.+--
T Consensus 28 ~~sA~l~e~aGf~ai~vsG~~--~a~~~-----~G~pD~~~vt~~----em~~~~~~I~~~~~~~PviaD~d~------- 89 (302)
T 3fa4_A 28 GLSARVALSAGFDALYMTGAG--TAASV-----HGQADLGICTLN----DMRANAEMISNISPSTPVIADADT------- 89 (302)
T ss_dssp HHHHHHHHTTTCSCEEECHHH--HHHHH-----HSCCSSSCCCHH----HHHHHHHHHHTTSTTSCEEEECTT-------
T ss_pred HHHHHHHHHcCCCEEEeCcHH--HHHHH-----cCCCCCCcCCHH----HHHHHHHHHHhhccCCCEEEECCC-------
Confidence 667888999999999985322 11110 011221111222 223344455544322378776632
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc------ccCCCchhhHHHHhhc------CCcEEEeCCC-C-----
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE------EKSECPHSLLPMRKAF------KGTFLVAGGY-D----- 327 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~------~~~~~~~~~~~ir~~~------~~pvi~~Ggi-t----- 327 (399)
|.++ .+...+.++.|+++|+..+++-.......- .-.+..+++.+|+.+. +.+++.+.+. .
T Consensus 90 Gyg~-~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 168 (302)
T 3fa4_A 90 GYGG-PIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHG 168 (302)
T ss_dssp TTSS-HHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHC
T ss_pred CCCC-HHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCC
Confidence 2233 455788899999999999998543221100 0112223444444332 4455555543 1
Q ss_pred ----HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 328 ----REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 328 ----~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
.+.++.+++.| +|.|.+ ..+.+++-..++.+.
T Consensus 169 ldeAi~Ra~ay~eAG-AD~ifi--~g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 169 YEESVARLRAARDAG-ADVGFL--EGITSREMARQVIQD 204 (302)
T ss_dssp HHHHHHHHHHHHTTT-CSEEEE--TTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCEEee--cCCCCHHHHHHHHHH
Confidence 23455677777 999988 446788877777654
No 449
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=89.58 E-value=13 Score=36.34 Aligned_cols=116 Identities=11% Similarity=0.037 Sum_probs=75.2
Q ss_pred HHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCC
Q 015862 187 LAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 266 (399)
Q Consensus 187 ~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~ 266 (399)
.++..+.+.|.|.++|-++. .+| ..+|++|-+ .| .||.++-..
T Consensus 125 ~svd~l~~~~vd~~KIgS~~----------~~N-----------------~pLL~~va~-~g-KPViLStGm-------- 167 (385)
T 1vli_A 125 GSADLLQSTSPSAFKIASYE----------INH-----------------LPLLKYVAR-LN-RPMIFSTAG-------- 167 (385)
T ss_dssp HHHHHHHTTCCSCEEECGGG----------TTC-----------------HHHHHHHHT-TC-SCEEEECTT--------
T ss_pred HHHHHHHhcCCCEEEECccc----------ccC-----------------HHHHHHHHh-cC-CeEEEECCC--------
Confidence 34445556789999998766 122 556666655 23 278876543
Q ss_pred CCChHHHHHHHHHhhhhhCc---eEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-C-HHHHHHHHHcCCC
Q 015862 267 DSNPEALGLYMAESLNKYGI---LYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-D-REDGNKAIAEGRA 340 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gv---d~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t-~~~a~~~L~~G~~ 340 (399)
. ++++....++.+.+.|. -.+|+. ..|..+ ....++..+..+|+.+ ..||...+-- . ...+..++.-| |
T Consensus 168 -a-Tl~Ei~~Ave~i~~~Gn~~iiLlhc~-s~YPtp-~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlG-A 242 (385)
T 1vli_A 168 -A-EISDVHEAWRTIRAEGNNQIAIMHCV-AKYPAP-PEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLG-A 242 (385)
T ss_dssp -C-CHHHHHHHHHHHHTTTCCCEEEEEEC-SSSSCC-GGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTT-C
T ss_pred -C-CHHHHHHHHHHHHHCCCCcEEEEecc-CCCCCC-hhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcC-C
Confidence 2 67777778888888774 344543 223221 2233566788899999 8998665433 4 77788899999 8
Q ss_pred cEEE
Q 015862 341 DLVV 344 (399)
Q Consensus 341 D~V~ 344 (399)
|+|-
T Consensus 243 ~iIE 246 (385)
T 1vli_A 243 KLIE 246 (385)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 8665
No 450
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=89.53 E-value=2.4 Score=41.63 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=32.0
Q ss_pred CchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 305 CPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 305 ~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
.++.++.+|+.+++||++-|-.++++|+.+++.| +|+|.+
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 279 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHG-LNGILV 279 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcC-CCEEEe
Confidence 3455778899999999887656999999999998 999988
No 451
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=89.36 E-value=4.3 Score=38.53 Aligned_cols=155 Identities=17% Similarity=0.158 Sum_probs=86.4
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhC-CCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIG-ADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg-~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+.+.. +-... .-..|.-.=+++ -+++.+++|++.+. .-||.+.+--
T Consensus 35 ~~sA~l~e~aGf~ai~vsG~~--~a~s~-----~G~pD~~~vt~~----em~~~~~~i~r~~~~~~PviaD~d~------ 97 (307)
T 3lye_A 35 GLSARTAMELGFKSLYMTGAG--TTASR-----LGQPDLAIAQLH----DMRDNADMIANLDPFGPPLIADMDT------ 97 (307)
T ss_dssp HHHHHHHHHTTCSCEEECHHH--HHHHH-----HCCCSSSCSCHH----HHHHHHHHHHTSSTTSCCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEeccHH--HHHHh-----cCCCCCCCCCHH----HHHHHHHhhhccCCCCCcEEEECCC------
Confidence 667889999999999985322 11110 011221111222 23445555655544 2377776532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc------ccCCCchhhHHHHhh------cCCcEEEeCCC-C----
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE------EKSECPHSLLPMRKA------FKGTFLVAGGY-D---- 327 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~------~~~~~~~~~~~ir~~------~~~pvi~~Ggi-t---- 327 (399)
+.++ .+...+.++.|+++|+..+++-.......- .-.+..+++.+|+.+ .+.+++.+.+. .
T Consensus 98 -Gyg~-~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~ 175 (307)
T 3lye_A 98 -GYGG-PIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSL 175 (307)
T ss_dssp -CSSS-HHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHH
T ss_pred -CCCC-HHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhcc
Confidence 1233 456788899999999999998543221100 011222344444333 24456666654 2
Q ss_pred -----HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 328 -----REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 328 -----~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
.+.++.+.+.| +|.|.+= .+.+++..+++.+.
T Consensus 176 gldeAi~Ra~ay~eAG-AD~ifi~--~~~~~~~~~~i~~~ 212 (307)
T 3lye_A 176 GYEECIERLRAARDEG-ADVGLLE--GFRSKEQAAAAVAA 212 (307)
T ss_dssp CHHHHHHHHHHHHHTT-CSEEEEC--CCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCC-CCEEEec--CCCCHHHHHHHHHH
Confidence 23455677787 9999884 45788877777654
No 452
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=89.36 E-value=0.42 Score=47.26 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=48.1
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+.++.+.+.|+|+|.+... .. ......+.++.+|+.+++||++.+-.|+++|+.+++.| +|+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta-~G---~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aG-AD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSA-HG---HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCS-CC---SBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCC-CC---CcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcC-CCEEEEe
Confidence 34677888899999976322 11 01112457788888888888764334999999999998 9999884
No 453
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=89.27 E-value=1 Score=40.40 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ceEEEecCCccc
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANY 262 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~-~v~vrls~~~~~ 262 (399)
++.+.++.+.++|.|.|++-..-| .|. | |.+ +| .++++++|+.++.. .+.+.++.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg----~f~-~--~~~---~~----------~~~i~~l~~~~~~~~~v~l~vnd---- 79 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDG----RFV-P--NIT---IG----------PLVVDSLRPITDLPLDVHLMIVE---- 79 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBS----SSS-S--CBC---CC----------HHHHHHHGGGCCSCEEEEEESSS----
T ss_pred HHHHHHHHHHHCCCCEEEEeeccC----Ccc-c--ccc---cC----------HHHHHHHHhccCCcEEEEEEecC----
Confidence 356677788889999999865332 121 1 221 22 68899999887422 23443331
Q ss_pred CCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 015862 263 MESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRAD 341 (399)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 341 (399)
.+ ..++.+.++|+|++++|..... . ......++.+++. +..++..-.- |+.+..+.+..+ +|
T Consensus 80 --------~~---~~v~~~~~~Gad~v~vh~~~~~---~-~~~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~~~-~d 142 (230)
T 1rpx_A 80 --------PD---QRVPDFIKAGADIVSVHCEQSS---T-IHLHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVLDA-VD 142 (230)
T ss_dssp --------HH---HHHHHHHHTTCSEEEEECSTTT---C-SCHHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTTTT-CS
T ss_pred --------HH---HHHHHHHHcCCCEEEEEecCcc---c-hhHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHhh-CC
Confidence 12 3455556789999998753000 0 1112355666553 4443333222 444444444455 89
Q ss_pred EE
Q 015862 342 LV 343 (399)
Q Consensus 342 ~V 343 (399)
+|
T Consensus 143 ~v 144 (230)
T 1rpx_A 143 LV 144 (230)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 454
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=89.24 E-value=16 Score=35.15 Aligned_cols=79 Identities=20% Similarity=0.059 Sum_probs=49.3
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeC-CC--cccccccCCCchhhHHHHhhcCCcEEEe-----CCCC--HHHHHHHHHcCC
Q 015862 270 PEALGLYMAESLNKYGILYCHMVE-PR--MKTREEKSECPHSLLPMRKAFKGTFLVA-----GGYD--REDGNKAIAEGR 339 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~-~~--~~~~~~~~~~~~~~~~ir~~~~~pvi~~-----Ggit--~~~a~~~L~~G~ 339 (399)
++++....++.+...|-.-+.+.+ +. +..+.....++..+..+|+.+..||++- |.-+ +..+..+++.|
T Consensus 225 tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~G- 303 (350)
T 1vr6_A 225 TIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVG- 303 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhC-
Confidence 677777788888888865455542 22 2111122234455678999889998652 2211 56677778888
Q ss_pred CcEEEechHH
Q 015862 340 ADLVVYGRLF 349 (399)
Q Consensus 340 ~D~V~~gR~~ 349 (399)
+|.+++=+-+
T Consensus 304 A~Gl~IE~H~ 313 (350)
T 1vr6_A 304 AHGIIVEVHP 313 (350)
T ss_dssp CSEEEEEBCS
T ss_pred CCEEEEEecC
Confidence 9988876543
No 455
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=88.94 E-value=1.8 Score=41.63 Aligned_cols=138 Identities=14% Similarity=0.063 Sum_probs=82.9
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
.++|.++|.|.|.|..+- |+ .+.+..++-+.++-.+.+.++++.+|+. |. .|+++..+ +.. ...
T Consensus 102 i~~a~~~g~~~v~i~~~~--------s~--~~~~~~~~~s~~e~l~~~~~~v~~ak~~-G~---~v~~~~~~-~~~-~~~ 165 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKG--------SL--HHLEKQLGKTPKEFFTDVSFVIEYAIKS-GL---KINVYLED-WSN-GFR 165 (337)
T ss_dssp HHHHHHHTCCEEEEEEEC--------SH--HHHHHHTCCCHHHHHHHHHHHHHHHHHT-TC---EEEEEEET-HHH-HHH
T ss_pred HHHHHHCCCCEEEEEEec--------CH--HHHHHHhCCCHHHHHHHHHHHHHHHHHC-CC---EEEEEEEE-CCC-CCc
Confidence 566778999999876543 11 1223334556676677777888887775 22 34444321 000 011
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeC----CCCHHHHHHHHHcCCCcEE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAG----GYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G----git~~~a~~~L~~G~~D~V 343 (399)
.+.+...++++.+.++|++.|.+.... +. ..+....+.++.+++.+ ++|+-.=. |.-...+..+++.| +|.|
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G~-~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aG-a~~v 242 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTL-GV-LSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAG-VKGL 242 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTT-CC-CCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTT-CSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-CC-cCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhC-CCEE
Confidence 245677889999999999999875431 10 01111235677888888 56654332 22366778889998 8877
Q ss_pred Ee
Q 015862 344 VY 345 (399)
Q Consensus 344 ~~ 345 (399)
-.
T Consensus 243 d~ 244 (337)
T 3ble_A 243 HA 244 (337)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 456
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=88.86 E-value=2.7 Score=39.88 Aligned_cols=139 Identities=14% Similarity=0.154 Sum_probs=84.3
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC-C-cccCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP-F-ANYMESG 266 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~-~-~~~~~~~ 266 (399)
.++|.++|.|.|.|-.+. |+. ++....+-+.+.-.+.+.++++.+|+. |. .|.+-++- + ..+.
T Consensus 87 i~~a~~~g~~~v~i~~~~--------sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~-G~-~v~~~i~~~~~~~~~--- 151 (307)
T 1ydo_A 87 LENALEGGINEACVFMSA--------SET--HNRKNINKSTSESLHILKQVNNDAQKA-NL-TTRAYLSTVFGCPYE--- 151 (307)
T ss_dssp HHHHHHHTCSEEEEEEES--------SHH--HHHTTTCSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECTTCBTTT---
T ss_pred HHHHHhCCcCEEEEEeec--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-EEEEEEEEEecCCcC---
Confidence 456777899999876543 222 223344557777777778888888775 32 22222221 0 0111
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeC----CCCHHHHHHHHHcCCCc
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAG----GYDREDGNKAIAEGRAD 341 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G----git~~~a~~~L~~G~~D 341 (399)
+..+.+...++++.+.+.|++.|.+.... +. ..+....+.++.+++.++ +|+-.=+ |.-...+..+++.| +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G~-~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aG-a~ 228 (307)
T 1ydo_A 152 KDVPIEQVIRLSEALFEFGISELSLGDTI-GA-ANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMG-IT 228 (307)
T ss_dssp BCCCHHHHHHHHHHHHHHTCSCEEEECSS-CC-CCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHT-CC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCC-CC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhC-CC
Confidence 23467888999999999999998875421 11 011112356777888884 6654332 23467778899998 88
Q ss_pred EEEe
Q 015862 342 LVVY 345 (399)
Q Consensus 342 ~V~~ 345 (399)
.|-.
T Consensus 229 ~vd~ 232 (307)
T 1ydo_A 229 VFDG 232 (307)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 457
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.69 E-value=0.59 Score=47.52 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=49.5
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+.++.|.++|+|.|++....- ......+.++.+|+.+ ++||++.+..|++.|+.+++.| +|+|.++
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aG-aD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG-VSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHhccCceEEeccccc----cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhC-CCEEEEC
Confidence 4567778888999999864321 0111346788899998 5788774445999999999999 9999875
No 458
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.55 E-value=2.4 Score=40.82 Aligned_cols=130 Identities=16% Similarity=0.148 Sum_probs=78.7
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
.++|.++|.|+|-|.... |. .+-..++++.+|+. |-. +.++..+ ...
T Consensus 99 i~~a~~aGvd~v~I~~~~--------s~----------------~~~~~~~i~~ak~~-G~~---v~~~~~~-----a~~ 145 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHC--------TE----------------ADVSKQHIEYARNL-GMD---TVGFLMM-----SHM 145 (345)
T ss_dssp HHHHHHHTCCEEEEEEET--------TC----------------GGGGHHHHHHHHHH-TCE---EEEEEES-----TTS
T ss_pred HHHHHhCCcCEEEEEEec--------cH----------------HHHHHHHHHHHHHC-CCE---EEEEEEe-----CCC
Confidence 456677899999885321 11 12346777777765 332 2222211 113
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeC----CCCHHHHHHHHHcCCCcE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAG----GYDREDGNKAIAEGRADL 342 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G----git~~~a~~~L~~G~~D~ 342 (399)
.+.+...++++.+.++|++.|.+.... +.. .+....+.++.+|+.+ ++|+-.=. |+-...+..+++.| +|.
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~-G~~-~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG-a~~ 222 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSG-GAM-SMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG-CDR 222 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTT-CCC-CHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT-CCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCc-Ccc-CHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC-CCE
Confidence 356778999999999999998875431 111 1112345678899998 57765422 33467788899998 665
Q ss_pred E-----EechHHhhCCcH
Q 015862 343 V-----VYGRLFLANPDL 355 (399)
Q Consensus 343 V-----~~gR~~iadPdl 355 (399)
| ++|.. -.|+.+
T Consensus 223 vd~tv~GlG~~-aGN~~l 239 (345)
T 1nvm_A 223 VDASLAGMGAG-AGNAPL 239 (345)
T ss_dssp EEEBGGGCSST-TCBCBH
T ss_pred EEecchhccCC-ccCcCH
Confidence 5 44543 356654
No 459
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=88.37 E-value=1.8 Score=39.72 Aligned_cols=75 Identities=11% Similarity=-0.024 Sum_probs=49.6
Q ss_pred HHHHHHHHHhhhhhCceEEEEeCCCccccccc-------------CC----CchhhHHHHhhcCCcEEEeCCCCHHH---
Q 015862 271 EALGLYMAESLNKYGILYCHMVEPRMKTREEK-------------SE----CPHSLLPMRKAFKGTFLVAGGYDRED--- 330 (399)
Q Consensus 271 ~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~-------------~~----~~~~~~~ir~~~~~pvi~~Ggit~~~--- 330 (399)
.++..+.++.|++.|+|+|++..+...+.... .. ..+.++.+|+.+++||+....+++..
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~ 110 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRS 110 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHH
Confidence 46788899999999999999965432111100 00 12456778888889988765444432
Q ss_pred HHHHHHcCCCcEEEec
Q 015862 331 GNKAIAEGRADLVVYG 346 (399)
Q Consensus 331 a~~~L~~G~~D~V~~g 346 (399)
.+.+.+.| +|.|.+.
T Consensus 111 ~~~a~~aG-adgv~v~ 125 (262)
T 1rd5_A 111 LAKMKEAG-VHGLIVP 125 (262)
T ss_dssp THHHHHTT-CCEEECT
T ss_pred HHHHHHcC-CCEEEEc
Confidence 34477777 9988874
No 460
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=88.36 E-value=3.1 Score=39.95 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=45.1
Q ss_pred HHhhhhhCceEEEEeCCCccc---ccccCC---CchhhHHHHhhcCCcEEEe--CC-CCHHHHHHHHHcCCCcEEEec
Q 015862 278 AESLNKYGILYCHMVEPRMKT---REEKSE---CPHSLLPMRKAFKGTFLVA--GG-YDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 278 ~~~Le~~Gvd~l~v~~~~~~~---~~~~~~---~~~~~~~ir~~~~~pvi~~--Gg-it~~~a~~~L~~G~~D~V~~g 346 (399)
.+.++..|+|+|.++...... +..... ..+.++.+|+.+++||++- |. ++++++..+.+.| +|+|.+.
T Consensus 133 ~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G-ad~I~v~ 209 (349)
T 1p0k_A 133 KEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG-AAAVDIG 209 (349)
T ss_dssp HHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT-CSEEEEE
T ss_pred HHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEEc
Confidence 345667789998765432111 111111 2356788999999998874 33 5899999999998 9999884
No 461
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=88.29 E-value=0.83 Score=44.29 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=45.3
Q ss_pred HHHhhhhh--CceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 277 MAESLNKY--GILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 277 l~~~Le~~--Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.++.+.+. |++.+.++... . .....++.++++|+.+ ++||++.+..|+++|+.+++.| +|+|.++
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~-g---~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aG-aD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVAN-G---YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSG-ADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSC-T---TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecC-C---CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhC-CCEEEEC
Confidence 44445455 88987765321 1 1112356788899999 7888865555999999999999 9999664
No 462
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=88.17 E-value=11 Score=35.32 Aligned_cols=160 Identities=16% Similarity=0.075 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHH----------HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHH
Q 015862 172 RLRTDEIPQIVND----------FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVE 241 (399)
Q Consensus 172 ~mt~~eI~~ii~~----------f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~ 241 (399)
.+|...+.++.+. =+-.|+.+.++|||.|-+ +.. |-.-.+ =..|--.=+++ -.+..++
T Consensus 20 ~~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv-GdS--l~~~~l-----G~~dt~~vTld----emi~h~~ 87 (281)
T 1oy0_A 20 KIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLV-GDS--AANVVY-----GYDTTVPISID----ELIPLVR 87 (281)
T ss_dssp CCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEE-CTT--HHHHTT-----CCSSSSSCCGG----GTHHHHH
T ss_pred CcCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCCCHH----HHHHHHH
Confidence 3566666666542 256788899999999954 221 111111 01111111222 3366777
Q ss_pred HHHHHhCCCceEEEecCCcccCCCCCCChHHHHHH-HHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CC
Q 015862 242 AVSNEIGADRVGIRLSPFANYMESGDSNPEALGLY-MAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KG 318 (399)
Q Consensus 242 avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~-l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~ 318 (399)
+|++.+..-+|.+.+.- . +...+.+++.+ ..+.++++|++.+++-.+ .+.+..||..+ .+
T Consensus 88 aV~r~~~~~~vvaD~pf----g--sy~~s~~~a~~na~rl~~eaGa~aVklEdg-----------~e~~~~I~al~~agI 150 (281)
T 1oy0_A 88 GVVRGAPHALVVADLPF----G--SYEAGPTAALAAATRFLKDGGAHAVKLEGG-----------ERVAEQIACLTAAGI 150 (281)
T ss_dssp HHHHHCTTSEEEEECCT----T--SSTTCHHHHHHHHHHHHHTTCCSEEEEEBS-----------GGGHHHHHHHHHHTC
T ss_pred HHHhcCCCCeEEEECCC----C--cccCCHHHHHHHHHHHHHHhCCeEEEECCc-----------HHHHHHHHHHHHCCC
Confidence 88887753345555431 1 12224555555 455566799999998543 13444444443 58
Q ss_pred cEE-----------EeCCC-----C------HHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhCCC
Q 015862 319 TFL-----------VAGGY-----D------REDGNKAIAEGRADLVVYGRLFLANPDLPRRFELNAP 364 (399)
Q Consensus 319 pvi-----------~~Ggi-----t------~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g~~ 364 (399)
||+ .-|++ | .++|..+.+.| ||.|.+-- +. .++.+++.+...
T Consensus 151 pV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAG-A~~ivlE~--vp-~~~a~~it~~l~ 214 (281)
T 1oy0_A 151 PVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAG-AFAVVMEM--VP-AELATQITGKLT 214 (281)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHHHHHT-CSEEEEES--CC-HHHHHHHHHHCS
T ss_pred CEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcC-CcEEEEec--CC-HHHHHHHHHhCC
Confidence 876 22443 2 23455555667 99887732 22 266777776544
No 463
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.16 E-value=3.8 Score=38.29 Aligned_cols=101 Identities=10% Similarity=-0.033 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCCChHHHHHHHHHhhhh-hCceEEEEeCCCcc--c---ccccC--CC
Q 015862 234 RFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNK-YGILYCHMVEPRMK--T---REEKS--EC 305 (399)
Q Consensus 234 r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~-~Gvd~l~v~~~~~~--~---~~~~~--~~ 305 (399)
.++.++++.+|+.....++.+-+... ..+++.+.++.+++ .|+|+|+++-..-. . .+... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~p~~v~l~~~----------~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~ 152 (311)
T 1ep3_A 83 VIMTEKLPWLNENFPELPIIANVAGS----------EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVA 152 (311)
T ss_dssp HHHHTHHHHHHHHCTTSCEEEEECCS----------SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEEcCC----------CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHH
Confidence 34445566777633233777766541 35678888999988 89999987643211 0 00000 01
Q ss_pred chhhHHHHhhcCCcEEEe--CCC-CHHH-HHHHHHcCCCcEEEe
Q 015862 306 PHSLLPMRKAFKGTFLVA--GGY-DRED-GNKAIAEGRADLVVY 345 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~--Ggi-t~~~-a~~~L~~G~~D~V~~ 345 (399)
.+.++.+++.+++||++- .++ +..+ ++.+.+.| +|+|.+
T Consensus 153 ~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G-~d~i~v 195 (311)
T 1ep3_A 153 AALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAG-ADGLTM 195 (311)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcC-CCEEEE
Confidence 356777888888887653 244 5444 66666676 999988
No 464
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=88.11 E-value=6.1 Score=39.69 Aligned_cols=139 Identities=18% Similarity=0.158 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCc
Q 015862 181 IVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFA 260 (399)
Q Consensus 181 ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~ 260 (399)
+++.|+++ +.++|.|.|.|..+. |.. +-+.+.++.+|+. |. .+.+-++...
T Consensus 101 v~~~~v~~---a~~~Gvd~i~if~~~--------sd~----------------~ni~~~i~~ak~~-G~-~v~~~i~~~~ 151 (464)
T 2nx9_A 101 VVDTFVER---AVKNGMDVFRVFDAM--------NDV----------------RNMQQALQAVKKM-GA-HAQGTLCYTT 151 (464)
T ss_dssp HHHHHHHH---HHHTTCCEEEECCTT--------CCT----------------HHHHHHHHHHHHT-TC-EEEEEEECCC
T ss_pred hhHHHHHH---HHhCCcCEEEEEEec--------CHH----------------HHHHHHHHHHHHC-CC-EEEEEEEeee
Confidence 34555544 457899999987543 111 3356777777765 32 3333333211
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeC----CCCHHHHHHHHH
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAG----GYDREDGNKAIA 336 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G----git~~~a~~~L~ 336 (399)
+ ...+.+...++++.+.++|++.|.+.... +. ..+......++.+|+.+++|+-.=. |.-...+..+++
T Consensus 152 ---~--~~~~~e~~~~~a~~l~~~Gad~I~l~DT~-G~-~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~ 224 (464)
T 2nx9_A 152 ---S--PVHNLQTWVDVAQQLAELGVDSIALKDMA-GI-LTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIE 224 (464)
T ss_dssp ---C--TTCCHHHHHHHHHHHHHTTCSEEEEEETT-SC-CCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHH
T ss_pred ---C--CCCCHHHHHHHHHHHHHCCCCEEEEcCCC-CC-cCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHH
Confidence 1 13357888999999999999998875321 10 0111223567788888888764322 223677788999
Q ss_pred cCCCcEEE-----echHHhhCCcHHH
Q 015862 337 EGRADLVV-----YGRLFLANPDLPR 357 (399)
Q Consensus 337 ~G~~D~V~-----~gR~~iadPdl~~ 357 (399)
.| ||.|- +|.. ..||.+-.
T Consensus 225 AG-a~~VD~ti~g~ger-tGN~~lE~ 248 (464)
T 2nx9_A 225 AG-VDRVDTAISSMSGT-YGHPATES 248 (464)
T ss_dssp TT-CSEEEEBCGGGCST-TSCCBHHH
T ss_pred hC-CCEEEEeccccCCC-CcCHHHHH
Confidence 98 88764 4444 56776543
No 465
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=87.90 E-value=2 Score=41.58 Aligned_cols=81 Identities=10% Similarity=0.040 Sum_probs=65.4
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEechH
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRL 348 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 348 (399)
.+.+.+.+-+..|+++|+|++.+.-+... ....++.||+.+++|+++---|++..|..+++.| +|.+-+-=+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~-------~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dklRINPG 114 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKE-------DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHGIRINPG 114 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHH-------HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSEEEECHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChH-------HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCeEEECCc
Confidence 45677888899999999999998765321 2357788999999999988888999999999998 999999888
Q ss_pred HhhCCcHHH
Q 015862 349 FLANPDLPR 357 (399)
Q Consensus 349 ~iadPdl~~ 357 (399)
=+.+++=+.
T Consensus 115 Nig~~~~~~ 123 (366)
T 3noy_A 115 NIGKEEIVR 123 (366)
T ss_dssp HHSCHHHHH
T ss_pred ccCchhHHH
Confidence 887654333
No 466
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=87.88 E-value=1.8 Score=40.97 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=61.4
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC-------CchhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE-------CPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRAD 341 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~-------~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 341 (399)
.+.+.+.+.++.+.+.|+|+|.|..-+-.+...... ....++.+++.+++||. .-.+.++.++.+|+.| +|
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiS-IDT~~~~V~~aAl~aG-a~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPIS-IDTYKAEVAKQAIEAG-AH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEE-EECSCHHHHHHHHHHT-CC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEE-EeCCCHHHHHHHHHcC-CC
Confidence 356778888999999999999986432111000000 12234566666777764 3445799999999998 99
Q ss_pred EEEechHHhhCCcHHHHHHh
Q 015862 342 LVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 342 ~V~~gR~~iadPdl~~k~~~ 361 (399)
+|--..+.-.||++..-+++
T Consensus 138 iINdvsg~~~d~~m~~~aa~ 157 (297)
T 1tx2_A 138 IINDIWGAKAEPKIAEVAAH 157 (297)
T ss_dssp EEEETTTTSSCTHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHH
Confidence 99888887678988666543
No 467
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=87.72 E-value=8.4 Score=34.76 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=75.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
-|.+|++.+.++- +.++++|+|||-+-+ |.+ +-.-| .+.++.+.++.++-++
T Consensus 70 Ys~~E~~~M~~Di----~~~~~~GadGvV~G~---------Lt~--dg~iD-------------~~~~~~Li~~a~~~~v 121 (224)
T 2bdq_A 70 YNDLELRIMEEDI----LRAVELESDALVLGI---------LTS--NNHID-------------TEAIEQLLPATQGLPL 121 (224)
T ss_dssp CCHHHHHHHHHHH----HHHHHTTCSEEEECC---------BCT--TSSBC-------------HHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHH----HHHHHcCCCEEEEee---------ECC--CCCcC-------------HHHHHHHHHHhCCCeE
Confidence 5778888887764 677889999999642 322 11222 3444444445543333
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeCCCCHHH
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAGGYDRED 330 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~ 330 (399)
.+- .++|... ..+ -.+..+.|.+.|++-|-.|.+....+ -....+.++.+.+.. ++-++.+||++++.
T Consensus 122 TFH-RAFD~~~---~~d----~~~ale~L~~lGv~rILTSG~~~~~~--a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~N 191 (224)
T 2bdq_A 122 VFH-MAFDVIP---KSD----QKKSIDQLVALGFTRILLHGSSNGEP--IIENIKHIKALVEYANNRIEIMVGGGVTAEN 191 (224)
T ss_dssp EEC-GGGGGSC---TTT----HHHHHHHHHHTTCCEEEECSCSSCCC--GGGGHHHHHHHHHHHTTSSEEEECSSCCTTT
T ss_pred EEE-CchhccC---CcC----HHHHHHHHHHcCCCEEECCCCCCCCc--HHHHHHHHHHHHHhhCCCeEEEeCCCCCHHH
Confidence 331 1232110 011 23346667788999876554322110 111223444443322 35588889999999
Q ss_pred HHHHHHcCCCcEEEec
Q 015862 331 GNKAIAEGRADLVVYG 346 (399)
Q Consensus 331 a~~~L~~G~~D~V~~g 346 (399)
+.++++...++-+-..
T Consensus 192 i~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 192 YQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHTCCEEEET
T ss_pred HHHHHHhhCCCEEccc
Confidence 9999864448877754
No 468
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.37 E-value=0.74 Score=46.59 Aligned_cols=67 Identities=16% Similarity=0.114 Sum_probs=49.9
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
..+.++.+.++|+|.+.++.. .. .....++.++.+|+.+ +.||++.+..++++++.+++.| +|+|.+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~-~G---~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G-~d~I~v 305 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTA-HG---HSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAG-ADAVKV 305 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCS-CC---SSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEec-CC---chHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC-CCEEEE
Confidence 345677888899999887532 11 0112456788899998 5888876666999999999988 999987
No 469
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=87.17 E-value=1.3 Score=39.81 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+.++.+.++|.|.|++-..-|. |. | |. .+..++++++|+.+. .++.+-+=.+
T Consensus 21 l~~~i~~~~~~Gad~i~l~i~Dg~----fv-~--~~-------------~~~~~~~~~lr~~~~-~~~~v~lmv~----- 74 (228)
T 1h1y_A 21 LAAEADRMVRLGADWLHMDIMDGH----FV-P--NL-------------TIGAPVIQSLRKHTK-AYLDCHLMVT----- 74 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSS----SS-S--CB-------------CBCHHHHHHHHTTCC-SEEEEEEESS-----
T ss_pred HHHHHHHHHHcCCCEEEEEEecCC----cC-c--ch-------------hhCHHHHHHHHhhcC-CcEEEEEEec-----
Confidence 466777888999999877653331 21 1 11 122689999999872 2444333221
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCC-chhhHHHHhhcCCcEEEeCC-CCHHHHHHHHHc---CC
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSEC-PHSLLPMRKAFKGTFLVAGG-YDREDGNKAIAE---GR 339 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~-~~~~~~ir~~~~~pvi~~Gg-it~~~a~~~L~~---G~ 339 (399)
++ + ++++.+.+.|+|.+++|.... ... ...++.+++. +..++..=. -|+.+..+.+.. +
T Consensus 75 ----d~-~---~~i~~~~~agad~v~vH~~~~------~~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~- 138 (228)
T 1h1y_A 75 ----NP-S---DYVEPLAKAGASGFTFHIEVS------RDNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENP- 138 (228)
T ss_dssp ----CG-G---GGHHHHHHHTCSEEEEEGGGC------TTTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSC-
T ss_pred ----CH-H---HHHHHHHHcCCCEEEECCCCc------ccHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCC-
Confidence 12 1 134444558999998874411 112 3456666654 444433223 254444444444 5
Q ss_pred CcEEEechH------HhhCCcHHHHHH
Q 015862 340 ADLVVYGRL------FLANPDLPRRFE 360 (399)
Q Consensus 340 ~D~V~~gR~------~iadPdl~~k~~ 360 (399)
+|+|.+.-- --.+|...++++
T Consensus 139 ~d~vl~~sv~pg~~g~~~~~~~l~~i~ 165 (228)
T 1h1y_A 139 VELVLVMTVEPGFGGQKFMPEMMEKVR 165 (228)
T ss_dssp CSEEEEESSCTTCSSCCCCGGGHHHHH
T ss_pred CCEEEEEeecCCCCcccCCHHHHHHHH
Confidence 999987321 112555566655
No 470
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.79 E-value=1.5 Score=42.69 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=45.3
Q ss_pred HHHhhhhhCceEEEEeCCCc---ccccccCCC---chhhHHHHhhcCCcEEEeCC---CCHHHHHHHHHcCCCcEEEe
Q 015862 277 MAESLNKYGILYCHMVEPRM---KTREEKSEC---PHSLLPMRKAFKGTFLVAGG---YDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 277 l~~~Le~~Gvd~l~v~~~~~---~~~~~~~~~---~~~~~~ir~~~~~pvi~~Gg---it~~~a~~~L~~G~~D~V~~ 345 (399)
..+.++..|+|.+.++-... ..+...... .+.++.+|+.+++||++-+- .++++|+.+.+.| +|+|.+
T Consensus 160 ~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aG-ad~I~V 236 (365)
T 3sr7_A 160 GLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLG-VKTVDI 236 (365)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHT-CCEEEC
T ss_pred HHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcC-CCEEEE
Confidence 34445566777776653321 111112212 25688899999999887753 5899999999998 999977
No 471
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=86.78 E-value=11 Score=34.78 Aligned_cols=131 Identities=19% Similarity=0.272 Sum_probs=74.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCce
Q 015862 173 LRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRV 252 (399)
Q Consensus 173 mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v 252 (399)
-|.+|++.+.++- +.++++|+|||-+-+ |.+ + |.+. .+.++.+.++.++-++
T Consensus 67 Ys~~E~~~M~~Di----~~~~~~GadGvV~G~---------Lt~--d-------g~iD------~~~~~~Li~~a~~~~v 118 (256)
T 1twd_A 67 YSDGEFAAILEDV----RTVRELGFPGLVTGV---------LDV--D-------GNVD------MPRMEKIMAAAGPLAV 118 (256)
T ss_dssp CCHHHHHHHHHHH----HHHHHTTCSEEEECC---------BCT--T-------SSBC------HHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHH----HHHHHcCCCEEEEee---------ECC--C-------CCcC------HHHHHHHHHHhCCCcE
Confidence 5788888887764 677889999999642 322 1 2222 3444444455543333
Q ss_pred EEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHH
Q 015862 253 GIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDG 331 (399)
Q Consensus 253 ~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a 331 (399)
.+- .++|.. .++ .+..+.|.+.|++-|-.+.+... -....+.++.+.+.. ++-|+.+||++++.+
T Consensus 119 TFH-RAfD~~-----~d~----~~ale~L~~lG~~rILTSG~~~~----a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni 184 (256)
T 1twd_A 119 TFH-RAFDMC-----ANP----LYTLNNLAELGIARVLTSGQKSD----ALQGLSKIMELIAHRDAPIIMAGAGVRAENL 184 (256)
T ss_dssp EEC-GGGGGC-----SCH----HHHHHHHHHHTCCEEEECTTSSS----TTTTHHHHHHHHTSSSCCEEEEESSCCTTTH
T ss_pred EEE-Cchhcc-----CCH----HHHHHHHHHcCCCEEECCCCCCC----HHHHHHHHHHHHHhhCCcEEEecCCcCHHHH
Confidence 321 123211 222 23456677789997764433211 111233444443322 466889999999999
Q ss_pred HHHHHcCCCcEEEec
Q 015862 332 NKAIAEGRADLVVYG 346 (399)
Q Consensus 332 ~~~L~~G~~D~V~~g 346 (399)
.++++.| ++-+-++
T Consensus 185 ~~l~~tG-v~e~H~S 198 (256)
T 1twd_A 185 HHFLDAG-VLEVHSS 198 (256)
T ss_dssp HHHHHHT-CSEEEEC
T ss_pred HHHHHcC-CCeEeEC
Confidence 8888666 6766654
No 472
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=86.69 E-value=0.69 Score=42.01 Aligned_cols=122 Identities=17% Similarity=0.127 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 185 FRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 185 f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+.+..+.+.++|.|.|+|-..-|. |.. | ..+..++++++|+.+. .++.+.+=.+
T Consensus 19 l~~~i~~~~~~Gad~ihldi~DG~----fvp---~-------------~~~g~~~v~~lr~~~~-~~~~vhlmv~----- 72 (230)
T 1tqj_A 19 LGEEIKAVDEAGADWIHVDVMDGR----FVP---N-------------ITIGPLIVDAIRPLTK-KTLDVHLMIV----- 72 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSS----SSS---C-------------BCBCHHHHHHHGGGCC-SEEEEEEESS-----
T ss_pred HHHHHHHHHHcCCCEEEEEEEecC----CCc---c-------------hhhhHHHHHHHHhhcC-CcEEEEEEcc-----
Confidence 466778888999999877764332 221 2 1122589999998873 2555444322
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCc-EEEeCCCCHHHHHHHHHcCCCcEE
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGT-FLVAGGYDREDGNKAIAEGRADLV 343 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~p-vi~~Ggit~~~a~~~L~~G~~D~V 343 (399)
++ + .+++.+.++|+|.++++..... . ......++.+++. +.. .+...--|+.+..+.+..+ +|+|
T Consensus 73 ----dp-~---~~i~~~~~aGadgv~vh~e~~~---~-~~~~~~~~~i~~~-g~~~gv~~~p~t~~e~~~~~~~~-~D~v 138 (230)
T 1tqj_A 73 ----EP-E---KYVEDFAKAGADIISVHVEHNA---S-PHLHRTLCQIREL-GKKAGAVLNPSTPLDFLEYVLPV-CDLI 138 (230)
T ss_dssp ----SG-G---GTHHHHHHHTCSEEEEECSTTT---C-TTHHHHHHHHHHT-TCEEEEEECTTCCGGGGTTTGGG-CSEE
T ss_pred ----CH-H---HHHHHHHHcCCCEEEECccccc---c-hhHHHHHHHHHHc-CCcEEEEEeCCCcHHHHHHHHhc-CCEE
Confidence 12 1 2345667789999998743000 0 1112345555553 433 3333222666665555565 8998
Q ss_pred Eec
Q 015862 344 VYG 346 (399)
Q Consensus 344 ~~g 346 (399)
.++
T Consensus 139 ~~m 141 (230)
T 1tqj_A 139 LIM 141 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 473
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=86.45 E-value=19 Score=34.22 Aligned_cols=216 Identities=19% Similarity=0.160 Sum_probs=110.7
Q ss_pred HHHHHhhcC-CCcEEEEcccccCCCCCCCCCCCCCCCHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCC
Q 015862 67 ILYYSQRTT-KGGFLIAEATGVSNTAQGNPNTPSIWTKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAP 145 (399)
Q Consensus 67 ~~~y~~~a~-g~Glii~e~~~V~~~g~~~~~~~~l~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~ 145 (399)
+.--..... |.||.=||...++.+. .| ..+++.+.+++++++ ..|..+++-+...|..-...
T Consensus 32 ~~~a~~~GadgVGL~RtE~l~ld~e~--~p-----~~~~q~~~~~~~~~~--~~~~~v~VR~~d~g~dk~~~-------- 94 (324)
T 2xz9_A 32 VASALANGAEGVGLFRTEFLYMDRNS--LP-----SEEEQFEAYKEVVEK--MGGRPVTIRTLDIGGDKELP-------- 94 (324)
T ss_dssp HHHHHHTTCSSEEEECCGGGTSSSSS--CC-----CHHHHHHHHHHHHHH--TTTSCEEEECCCCBGGGCCT--------
T ss_pred HHHHHhCCCCeEeehhhhhhhccCCC--CC-----CHHHHHHHHHHHHHH--hCCCceEEEeCCCCcchhhh--------
Confidence 443444444 7899999999988653 11 245666666666654 35677888887665321100
Q ss_pred cccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCC
Q 015862 146 ISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQY 225 (399)
Q Consensus 146 ~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~y 225 (399)
+-+.....+|.-+.-|+ .+...+ .++.+.-..|..+|...|.++|-+=. .+..
T Consensus 95 ~~~~~~E~nP~LG~Rgi---------R~~l~~-p~~~~~ql~Ai~ra~~~G~~~ImvPm-------------V~s~---- 147 (324)
T 2xz9_A 95 YLDMPKEMNPFLGYRAI---------RLCLDR-PDIFKTQLRAILRASAYGNVQIMYPM-------------ISSV---- 147 (324)
T ss_dssp TTCCCCCSCGGGSSBTH---------HHHHHC-HHHHHHHHHHHHHHGGGSCEEEEECS-------------CCCH----
T ss_pred hhccccccCccccccee---------eeeccc-hhhHHHHHHHHHHHHhCCCCEEEEcC-------------CCCH----
Confidence 00100000110000000 011111 13334445667777778988887543 3222
Q ss_pred CCchhhhhHHHHHHHHHHHHH---hCC----C-ceEEEecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc
Q 015862 226 GGSLENRCRFALEIVEAVSNE---IGA----D-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK 297 (399)
Q Consensus 226 GGslenR~r~~~eii~avR~~---vg~----~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~ 297 (399)
.-.+.+.+++++++.. .|. . .|++=+ + + ..+...+..+.+. +|++.+..-...
T Consensus 148 -----~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mI-----------E-t-p~av~~~d~Ia~~-vD~~siGtnDLt 208 (324)
T 2xz9_A 148 -----EEVRKANSILEEVKAELDREGVKYDKEIKVGIMV-----------E-I-PSAAVTADILAKE-VDFFSIGTNDLT 208 (324)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEE-----------C-S-HHHHHTHHHHTTT-CSEEEECHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----------C-c-HHHHHHHHHHHHh-CcEEEECHHHHH
Confidence 1245567777777663 242 1 233322 1 1 2245556666555 999887322111
Q ss_pred cc------------c-ccCCCchhhHHHH------hhcCCcEEEeCCC--CHHHHHHHHHcCCCcEEEec
Q 015862 298 TR------------E-EKSECPHSLLPMR------KAFKGTFLVAGGY--DREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 298 ~~------------~-~~~~~~~~~~~ir------~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~g 346 (399)
+. . ..+......+.++ ++.++|+-.+|.+ +++.+..++..| +|+++++
T Consensus 209 q~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG-~~~~si~ 277 (324)
T 2xz9_A 209 QYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMAGDPLAAVILLGLG-LDEFSMS 277 (324)
T ss_dssp HHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGGCHHHHHHHHHHT-CCEEEEC
T ss_pred HHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccCCCHHHHHHHHHCC-CCEEEEC
Confidence 10 0 0111111222221 2237888777887 799999999999 8988764
No 474
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=86.36 E-value=1.5 Score=41.55 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=56.7
Q ss_pred HHHHhhhhhCceEEEEeCC-Cccccc----ccCCCchhhHHHHhhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHH
Q 015862 276 YMAESLNKYGILYCHMVEP-RMKTRE----EKSECPHSLLPMRKAFKGTFLVAGGY-DREDGNKAIAEGRADLVVYGRLF 349 (399)
Q Consensus 276 ~l~~~Le~~Gvd~l~v~~~-~~~~~~----~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 349 (399)
++++..++.|++.|.+-+. .....+ ......+.++.|++++++||++-+++ ..++++.+++.| +|.|- .-..
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaG-AD~Id-~s~~ 109 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELK-VDMLD-ESEV 109 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTT-CSEEE-EETT
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcC-CCEEE-cCCC
Confidence 4678889999988877531 111111 11235678999999999999988777 588888888887 99992 2222
Q ss_pred hhCCcHHHHHHh
Q 015862 350 LANPDLPRRFEL 361 (399)
Q Consensus 350 iadPdl~~k~~~ 361 (399)
+..+++.+.+++
T Consensus 110 ~~~~~li~~i~~ 121 (297)
T 4adt_A 110 LTMADEYNHINK 121 (297)
T ss_dssp SCCSCSSCCCCG
T ss_pred CCHHHHHHHHHh
Confidence 345577776665
No 475
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=86.28 E-value=5.9 Score=37.87 Aligned_cols=131 Identities=12% Similarity=0.142 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEec
Q 015862 178 IPQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 257 (399)
Q Consensus 178 I~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls 257 (399)
++.+.+...+-++...++|+|+|.|.-..+- +.||||. .=-+|...-+++|-+.++..++ +=+.
T Consensus 185 l~~i~~~~~~~~~~qi~aGad~i~i~D~~a~--~~~lsp~-------------~f~~f~~p~~k~i~~~~~~~~i-ih~~ 248 (348)
T 4ay7_A 185 LDIATEASIIYANAMVEAGADVIAIADPVAS--PDLMSPD-------------SFRQFLKSRLQKFASSVNSVTV-LHIC 248 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEECGGGS--TTTSCHH-------------HHHHHHHHHHHHHHHHSSSEEE-EECC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceeeccccc--cccCCHH-------------HHHHHhhHHHHHHHhhccCCcE-EEec
Confidence 3444455555666778899999998754321 1255542 2235777777777777754222 2111
Q ss_pred CCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC---------CH
Q 015862 258 PFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY---------DR 328 (399)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi---------t~ 328 (399)
++ +..+.+.+.+.|+|.+++... ...++.+|+.++..+..-|++ |+
T Consensus 249 --------g~------~~~~l~~~~~~g~d~i~~d~~-----------~~~~~~~k~~~g~~~~l~Gnldp~~~l~~g~~ 303 (348)
T 4ay7_A 249 --------GN------VNPILSDMADCGFEGLSVEEK-----------IGSAKKGKEVIGTRARLVGNVSSPFTLLPGPV 303 (348)
T ss_dssp --------SC------CHHHHHHHHTSCCSEEECCGG-----------GCCHHHHHHHHTTSSEEEEEECCCCCCTTCCH
T ss_pred --------CC------cHHHHHHHHHhccccccccch-----------hhHHHHHHHHhCCCEEEEcCCCChHhhcCCCH
Confidence 11 122455677889998875311 113456777665332222332 34
Q ss_pred HH----HHHHHHcCCCcEEEechHHh
Q 015862 329 ED----GNKAIAEGRADLVVYGRLFL 350 (399)
Q Consensus 329 ~~----a~~~L~~G~~D~V~~gR~~i 350 (399)
++ ++++|+.| -+++..|=++.
T Consensus 304 e~i~~~v~~~l~~~-g~I~~~Ghgi~ 328 (348)
T 4ay7_A 304 DKIKAEAKEALEGG-IDVLAPGCGIA 328 (348)
T ss_dssp HHHHHHHHHHHHTT-CSEEEESSSCC
T ss_pred HHHHHHHHHHHhCC-CCEEeCCCccC
Confidence 43 55677655 56777765544
No 476
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.28 E-value=2.6 Score=39.20 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=58.7
Q ss_pred hHHHHHHHHHhhhhhCceEEEEeCCCcccccccCC------------------CchhhHHHHhh-cCCcEEEeCCCCH--
Q 015862 270 PEALGLYMAESLNKYGILYCHMVEPRMKTREEKSE------------------CPHSLLPMRKA-FKGTFLVAGGYDR-- 328 (399)
Q Consensus 270 ~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~------------------~~~~~~~ir~~-~~~pvi~~Ggit~-- 328 (399)
+.+.+.++++.|++.|+|+|++.-|. +.+..+.+ ..+.++.+|+. .++|++.-+-++|
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPf-SDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPF-SDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCC-SCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 46778999999999999999997663 32221111 13466778887 7899877654443
Q ss_pred ----HH-HHHHHHcCCCcEEEechHHhhCC-cHHHHHHh
Q 015862 329 ----ED-GNKAIAEGRADLVVYGRLFLANP-DLPRRFEL 361 (399)
Q Consensus 329 ----~~-a~~~L~~G~~D~V~~gR~~iadP-dl~~k~~~ 361 (399)
+. ++.+.+.| +|.|.+.---+.+. ++.+.+++
T Consensus 109 ~~g~e~f~~~~~~aG-vdgvii~Dlp~ee~~~~~~~~~~ 146 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAG-VDSVLIADVPVEESAPFSKAAKA 146 (267)
T ss_dssp HHCHHHHHHHHHHHT-CCEEEETTSCGGGCHHHHHHHHH
T ss_pred HhhHHHHHHHHHHcC-CCEEEeCCCCHhhHHHHHHHHHH
Confidence 43 56677777 99988854444444 34444443
No 477
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=86.26 E-value=3.4 Score=39.85 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=33.2
Q ss_pred hhhHHHHhhcC-CcEEEeC--C-C-CHHHHHHHHH--cCCCcEEEechHHhhCCcHHHHHH
Q 015862 307 HSLLPMRKAFK-GTFLVAG--G-Y-DREDGNKAIA--EGRADLVVYGRLFLANPDLPRRFE 360 (399)
Q Consensus 307 ~~~~~ir~~~~-~pvi~~G--g-i-t~~~a~~~L~--~G~~D~V~~gR~~iadPdl~~k~~ 360 (399)
+-++.||+.++ .++++=| . - ++.++..... ++..|++.+||+++.-||-.+.++
T Consensus 266 ~e~~~iR~~~p~~~iLtPGIGAQggDq~rv~tp~~a~~~g~~~ivVGR~I~~A~dP~~Aa~ 326 (342)
T 3n3m_A 266 DEMNYIRTYFPNCYILSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQKAAQ 326 (342)
T ss_dssp HHHHHHHHHSTTCCEEECCSSTTCCCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHH
T ss_pred HHHHHHHHhCCCCeEEeCCCCcCCCCHHHHHhhhhhhhcCceEEEcChhhhcCCCHHHHHH
Confidence 35677888875 3344322 2 1 5655433222 234899999999999888755443
No 478
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=86.22 E-value=7.9 Score=36.33 Aligned_cols=124 Identities=18% Similarity=0.113 Sum_probs=79.7
Q ss_pred CCCHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHH
Q 015862 100 IWTKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIP 179 (399)
Q Consensus 100 l~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~ 179 (399)
..-++.++..+++++.+|++|..+-.-|.+.... |.. .. .+
T Consensus 117 ~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~--------------e~~---------------~~-----~~----- 157 (302)
T 2ftp_A 117 CSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC--------------PYD---------------GD-----VD----- 157 (302)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCB--------------TTT---------------BC-----CC-----
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC--------------CcC---------------CC-----CC-----
Confidence 3457788999999999999999988777653110 000 00 11
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCC
Q 015862 180 QIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPF 259 (399)
Q Consensus 180 ~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~ 259 (399)
.+.+.+.++.+.++|.|.|-|--.+|++ . +....+++++||+.++.-+|.+-..-
T Consensus 158 --~~~~~~~~~~~~~~G~d~i~l~DT~G~~-----~-----------------P~~~~~lv~~l~~~~~~~~l~~H~Hn- 212 (302)
T 2ftp_A 158 --PRQVAWVARELQQMGCYEVSLGDTIGVG-----T-----------------AGATRRLIEAVASEVPRERLAGHFHD- 212 (302)
T ss_dssp --HHHHHHHHHHHHHTTCSEEEEEESSSCC-----C-----------------HHHHHHHHHHHTTTSCGGGEEEEEBC-
T ss_pred --HHHHHHHHHHHHHcCCCEEEEeCCCCCc-----C-----------------HHHHHHHHHHHHHhCCCCeEEEEeCC-
Confidence 1345666777889999999988777641 1 45678999999999853367765532
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK 297 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~ 297 (399)
+. +...+.. ....++|++.++.+-..++
T Consensus 213 -~~-----Gla~An~----laAv~aGa~~vd~tv~GlG 240 (302)
T 2ftp_A 213 -TY-----GQALANI----YASLLEGIAVFDSSVAGLG 240 (302)
T ss_dssp -TT-----SCHHHHH----HHHHHTTCCEEEEBGGGCC
T ss_pred -Cc-----cHHHHHH----HHHHHhCCCEEEecccccC
Confidence 11 2223322 2223579999998754443
No 479
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=86.17 E-value=1.7 Score=41.54 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=64.8
Q ss_pred ecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCccccc------cc-CCCchhhHHHHhhcCCcEEEeCCCCH
Q 015862 256 LSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTRE------EK-SECPHSLLPMRKAFKGTFLVAGGYDR 328 (399)
Q Consensus 256 ls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~------~~-~~~~~~~~~ir~~~~~pvi~~Ggit~ 328 (399)
+.|+. |.+.+...+.+.+++.++.+.+.|+|+|.|-.-+-.+.. .+ ......++.|++.+++|| ..--+.+
T Consensus 18 vTPDS-Fsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpi-SIDT~~~ 95 (314)
T 2vef_A 18 VTPDS-FSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLI-SIDTWKS 95 (314)
T ss_dssp CCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEE-EEECSCH
T ss_pred CCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceE-EEeCCCH
Confidence 44533 333333446788899999999999999998642211000 00 001234556777666665 4455679
Q ss_pred HHHHHHHHcCCCcEEEechHHhhCCcHHHHHHh
Q 015862 329 EDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 329 ~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
+.++.+|+.| +|+|==-.++-.||++..-+++
T Consensus 96 ~Va~aAl~aG-a~iINDVsg~~~d~~m~~v~a~ 127 (314)
T 2vef_A 96 QVAEAALAAG-ADLVNDITGLMGDEKMPHVVAE 127 (314)
T ss_dssp HHHHHHHHTT-CCEEEETTTTCSCTTHHHHHHH
T ss_pred HHHHHHHHcC-CCEEEECCCCCCChHHHHHHHH
Confidence 9999999998 9999888888788988777553
No 480
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=86.15 E-value=1 Score=45.89 Aligned_cols=68 Identities=10% Similarity=0.086 Sum_probs=48.7
Q ss_pred HHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 274 GLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 274 ~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
..+.++.+.++|+|.++++... .. ....++.++.+|+.+ +.||++.+-.+.++|+.+++.| +|+|.+|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~-G~---~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aG-ad~I~vg 324 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ-GN---SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG-VDGLRVG 324 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-CC---SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred hHHHHHHHHHcCCCEEEeeccC-Cc---chhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcC-CCEEEEC
Confidence 3456677788999999985431 11 011346788899998 6888763334999999999999 9999663
No 481
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.13 E-value=0.94 Score=44.63 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=47.3
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGYDREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 346 (399)
.+.++.+.+.|+|++.+... .. .....++.++.+|+.+ ++||++.+..++++|+.+++.| +|+|.++
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~-~g---~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~G-ad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSA-HG---HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCS-CC---SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTT-CSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCC-CC---ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcC-CCEEEEC
Confidence 34556677889999987422 11 1112345678889998 6898874445899999999988 9999883
No 482
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=86.09 E-value=4.5 Score=41.15 Aligned_cols=39 Identities=26% Similarity=0.182 Sum_probs=33.5
Q ss_pred chhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 015862 306 PHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 306 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 345 (399)
++.++.||+.+++||++-|..++++|..+.+.| +|+|.+
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 370 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIG-VSGVVL 370 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcC-CCEEEE
Confidence 456788999999999887655899999999998 999988
No 483
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=86.00 E-value=3.9 Score=38.07 Aligned_cols=103 Identities=10% Similarity=0.064 Sum_probs=62.3
Q ss_pred ecCCcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCC-------chhhHHHHhhcCCcEEEeCCCCH
Q 015862 256 LSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSEC-------PHSLLPMRKAFKGTFLVAGGYDR 328 (399)
Q Consensus 256 ls~~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~-------~~~~~~ir~~~~~pvi~~Ggit~ 328 (399)
+.|+. |.+.+...+.+.+++-++.+.+.|+|+|+|..-+-.+....... ...++.+++ .++ .+..--+.+
T Consensus 15 vTPDS-FsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v-~iSIDT~~~ 91 (270)
T 4hb7_A 15 VTPDS-FSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDV-KISVDTFRS 91 (270)
T ss_dssp CC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSS-EEEEECSCH
T ss_pred CCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCC-eEEEECCCH
Confidence 44533 33333345778888999999999999999854221110011110 112333433 233 455556679
Q ss_pred HHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 329 EDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 329 ~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
+.|+++|+.| +|+|==-.+...||++..-+.+-
T Consensus 92 ~Va~~al~aG-a~iINDVs~g~~d~~m~~~va~~ 124 (270)
T 4hb7_A 92 EVAEACLKLG-VDMINDQWAGLYDHRMFQIVAKY 124 (270)
T ss_dssp HHHHHHHHHT-CCEEEETTTTSSCTHHHHHHHHT
T ss_pred HHHHHHHHhc-cceeccccccccchhHHHHHHHc
Confidence 9999999999 99998777888999998887753
No 484
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=85.92 E-value=3.6 Score=38.61 Aligned_cols=139 Identities=15% Similarity=0.076 Sum_probs=83.1
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC--CcccCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP--FANYMESG 266 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~--~~~~~~~~ 266 (399)
+.+|.++|.|.|.|-.+. |.. ++...++.+.+.-.+.+.++++.+|+. |. .|.+-++- ...+.
T Consensus 86 i~~a~~ag~~~v~i~~~~--------sd~--~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~-~v~~~l~~~~~~~~~--- 150 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAA--------SEL--FTKKNINCSIEESFQRFDAILKAAQSA-NI-SVRGYVSCALGCPYE--- 150 (298)
T ss_dssp HHHHHHTTCSEEEEEEES--------CHH--HHHHHHSCCHHHHHHHHHHHHHHHHHT-TC-EEEEEEETTTCBTTT---
T ss_pred HHHHHHCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-eEEEEEEEEeeCCcC---
Confidence 567788999999886543 111 223334556666677778888888775 32 23222221 00111
Q ss_pred CCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeC--CC--CHHHHHHHHHcCCCc
Q 015862 267 DSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAG--GY--DREDGNKAIAEGRAD 341 (399)
Q Consensus 267 ~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G--gi--t~~~a~~~L~~G~~D 341 (399)
+..+.+...++++.+.+.|++.|.+.... +. ..+....+.++.+++.++ +|+-.=. .+ -...+..+++.| ++
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G~-~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aG-a~ 227 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTI-GV-GTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMG-VS 227 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETT-SC-CCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTT-CC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCC-CC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhC-CC
Confidence 13357788999999999999998876321 10 011112356778888885 6653322 22 356678899998 88
Q ss_pred EEEe
Q 015862 342 LVVY 345 (399)
Q Consensus 342 ~V~~ 345 (399)
.|-.
T Consensus 228 ~vd~ 231 (298)
T 2cw6_A 228 VVDS 231 (298)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7743
No 485
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=85.90 E-value=5.3 Score=37.68 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL 256 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl 256 (399)
.+.-.+.|+...+.|+|.|+|.+-. +|.+.-.=+.+.-++-+..+|++|++.++ -+|+|.-
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeS-------------trPga~~v~~~eE~~RvvpvI~~l~~~~~-vpiSIDT 122 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGES-------------TRPGFAKVSVEEEIKRVVPMIQAVSKEVK-LPISIDT 122 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC-----------------CCCCCHHHHHHHHHHHHHHHHHHSC-SCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCc-------------CCCCCCCCCHHHHHHHHHHHHHHHHhcCC-ceEEEeC
Confidence 3555667788889999999999643 44433233567777788899999998763 2677743
No 486
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.89 E-value=5.2 Score=37.69 Aligned_cols=153 Identities=18% Similarity=0.170 Sum_probs=82.9
Q ss_pred HHHHHHHHHhCCCEEEEccc-cchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCC
Q 015862 186 RLAARNAIEAGFDGVELHGA-HGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME 264 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~-~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~ 264 (399)
+-.|+.+.++|||+|-+-+. .+.. + -..|--.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 29 ~~sA~~~~~aG~~ai~vsg~~~a~~----l-----G~pD~~~vt~~----em~~~~~~I~~~~~-~PviaD~d~------ 88 (295)
T 1s2w_A 29 GLSARIVQEAGFKGIWGSGLSVSAQ----L-----GVRDSNEASWT----QVVEVLEFMSDASD-VPILLDADT------ 88 (295)
T ss_dssp HHHHHHHHHHTCSCEEECCHHHHHT----C--------------CH----HHHHHHHHHHHTCS-SCEEEECCS------
T ss_pred HHHHHHHHHcCCCEEEeChHHHHHh----C-----CCCCCCCCCHH----HHHHHHHHHHhcCC-CCEEecCCC------
Confidence 66788888999999998742 3211 1 01221001222 23455556666553 267775532
Q ss_pred CCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc----c----ccCCCchhhHHHHhhc----CCcEEEeCCC------
Q 015862 265 SGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR----E----EKSECPHSLLPMRKAF----KGTFLVAGGY------ 326 (399)
Q Consensus 265 ~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~----~----~~~~~~~~~~~ir~~~----~~pvi~~Ggi------ 326 (399)
|.+. .+.+.+.++.|+++|++.+++-.....+. . .-.+..+.+.+|+.++ ...++..++-
T Consensus 89 -Gyg~-~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~ 166 (295)
T 1s2w_A 89 -GYGN-FNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAG 166 (295)
T ss_dssp -SCSS-HHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTT
T ss_pred -CCCC-HHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcc
Confidence 1233 45688889999999999999865432110 0 0112223445544432 2334444442
Q ss_pred -----CHHHHHHHHHcCCCcEEEechHHhhCCcHHHHHHhC
Q 015862 327 -----DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFELN 362 (399)
Q Consensus 327 -----t~~~a~~~L~~G~~D~V~~gR~~iadPdl~~k~~~g 362 (399)
..++|..+.+.| ||.|.+=- .+.+++..+++.+.
T Consensus 167 ~g~~~ai~Ra~ay~eAG-Ad~i~~e~-~~~~~~~~~~i~~~ 205 (295)
T 1s2w_A 167 WGLDEALKRAEAYRNAG-ADAILMHS-KKADPSDIEAFMKA 205 (295)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEECC-CSSSSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcC-CCEEEEcC-CCCCHHHHHHHHHH
Confidence 134566777777 99998831 24566777776654
No 487
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=85.36 E-value=1.3 Score=41.61 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEE
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGI 254 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~v 254 (399)
+++|..|.+||+..|-|| .|.++ | ..-.+.....|++++||+++++-.|.+
T Consensus 37 a~~A~~~~~AGAaivHlH----------------~Rd~~-G-~ps~d~~~~~e~~~~IR~~~pd~ii~~ 87 (284)
T 3chv_A 37 VESTQEAFEAGAAIAHCH----------------VRNDD-G-TPSSDPDRFARLTEGLHTHCPGMIVQF 87 (284)
T ss_dssp HHHHHHHHHHTCCEEEEC----------------EECTT-S-CEECCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHHcCCcEEEee----------------ecCCC-C-CcCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 889999999999999999 46666 4 233357788999999999964324444
No 488
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=85.25 E-value=3.7 Score=37.45 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=67.4
Q ss_pred CCCCCHHHHHHHHhhcCCCcEEEEcccccCCCCCCCCCCC-CCCCHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCC
Q 015862 59 NNVPQPHAILYYSQRTTKGGFLIAEATGVSNTAQGNPNTP-SIWTKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRD 137 (399)
Q Consensus 59 ~G~~t~~~~~~y~~~a~g~Glii~e~~~V~~~g~~~~~~~-~l~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~ 137 (399)
.+.||++++..-.+.--..- ...|+.+....+- |+.-..+.+.++.+++..|+.|.++.+=+-- .......
T Consensus 72 E~a~t~emi~ia~~~kP~~v-------tLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDp-d~~qi~a 143 (243)
T 1m5w_A 72 EMAVTEEMLAIAVETKPHFC-------CLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDA-DEEQIKA 143 (243)
T ss_dssp EECSSHHHHHHHHHHCCSEE-------EECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECS-CHHHHHH
T ss_pred ccCCCHHHHHHHHHcCCCEE-------EECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHH
Confidence 46788988886555432111 2223333332222 3334578899999999999999987765521 0000000
Q ss_pred CCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEccccc
Q 015862 138 YQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGVELHGAHG 207 (399)
Q Consensus 138 ~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVeIh~~~G 207 (399)
....+...+.+.- | .+ ....+..+.++-++.+.++|+.|.+.| +++|+|||
T Consensus 144 -----A~~~GA~~IELhT-----G----~Y--a~a~~~~~~~~el~~i~~aa~~A~~lG---L~VnAGHg 194 (243)
T 1m5w_A 144 -----AAEVGAPFIEIHT-----G----CY--ADAKTDAEQAQELARIAKAATFAASLG---LKVNAGHG 194 (243)
T ss_dssp -----HHHTTCSEEEEEC-----H----HH--HHCCSHHHHHHHHHHHHHHHHHHHHTT---CEEEEESS
T ss_pred -----HHHhCcCEEEEec-----h----hh--hcCCCchhHHHHHHHHHHHHHHHHHcC---CEEecCCC
Confidence 0000000000000 0 01 112344556677899999999999988 59999996
No 489
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=85.22 E-value=6.2 Score=37.79 Aligned_cols=116 Identities=9% Similarity=-0.017 Sum_probs=74.4
Q ss_pred CHHHHhhhHHHHHHHHHcCCeEEEeccc---CCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHH
Q 015862 102 TKEQVEAWKPIVDAVHAKGGIFFCQIRH---VGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEI 178 (399)
Q Consensus 102 ~d~~i~~~~~l~~~vh~~g~~i~~QL~H---~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI 178 (399)
.++.++.+++.++.++++|..+.+.+.+ .++
T Consensus 132 ~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~---------------------------------------------- 165 (337)
T 3ble_A 132 PKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFR---------------------------------------------- 165 (337)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHH----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCc----------------------------------------------
Confidence 4567788999999999999887766643 111
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecC
Q 015862 179 PQIVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSP 258 (399)
Q Consensus 179 ~~ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~ 258 (399)
.-.+.+.+.++.+.++|.|.|-|--.-|+ .. +.-+.++++++|+.+++-+|++-..-
T Consensus 166 -~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-------------------~~---P~~v~~lv~~l~~~~p~~~i~~H~Hn 222 (337)
T 3ble_A 166 -NSPDYVKSLVEHLSKEHIERIFLPDTLGV-------------------LS---PEETFQGVDSLIQKYPDIHFEFHGHN 222 (337)
T ss_dssp -HCHHHHHHHHHHHHTSCCSEEEEECTTCC-------------------CC---HHHHHHHHHHHHHHCTTSCEEEECBC
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEEecCCCC-------------------cC---HHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 01245678888899999999887644443 21 34568899999999964367665542
Q ss_pred CcccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcc
Q 015862 259 FANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMK 297 (399)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~ 297 (399)
++ +..... +-...++|++.++.+-..++
T Consensus 223 --d~-----GlA~AN----~laAv~aGa~~vd~tv~GlG 250 (337)
T 3ble_A 223 --DY-----DLSVAN----SLQAIRAGVKGLHASINGLG 250 (337)
T ss_dssp --TT-----SCHHHH----HHHHHHTTCSEEEEBGGGCS
T ss_pred --Cc-----chHHHH----HHHHHHhCCCEEEEeccccc
Confidence 21 112221 11123569999997654333
No 490
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=85.03 E-value=3.6 Score=39.28 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL 256 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl 256 (399)
+.-.+.|+...++|+|.|+|.+-. +|.+ -.=+.+.-++-+..+|++|++.+.+-+|+|.-
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeS-------------TrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT 124 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVK-------------AGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDT 124 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC------------------------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCc-------------CCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 444667788899999999998654 3443 12356777778889999999876333677643
No 491
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.00 E-value=7.1 Score=38.73 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=74.3
Q ss_pred HHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcccCCCCCC
Q 015862 189 ARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 268 (399)
Q Consensus 189 A~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~~~~~~~~ 268 (399)
..+|.++|.|.|-|-.+- |+. ++.-.++-+.+.=.+.+.++++.+|+. | +-|+++..+-+ .
T Consensus 116 i~~A~~aG~~~V~i~~s~--------Sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~-G---~~V~~~~eda~-----r 176 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGT--------SQY--LRKYSHGKDMTYIIDSATEVINFVKSK-G---IEVRFSSEDSF-----R 176 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-----------------------CHHHHHHHHHHHHHHTT-T---CEEEEEEESGG-----G
T ss_pred HHHHHHcCCCEEEEEeec--------cHH--HHHHHcCCCHHHHHHHHHHHHHHHHHC-C---CEEEEEEccCc-----C
Confidence 466778999988776443 221 222233444444344555566655553 2 34556543222 2
Q ss_pred ChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeC--CC--CHHHHHHHHHcCCCcEEE
Q 015862 269 NPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAG--GY--DREDGNKAIAEGRADLVV 344 (399)
Q Consensus 269 ~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G--gi--t~~~a~~~L~~G~~D~V~ 344 (399)
.+.+...++++.+.++|++.|.+.... +. ..+....+.++.+++.+++++-.=. .+ -...+..+++.| +|.|-
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTv-G~-~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aG-a~~vd 253 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTV-GC-ATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAG-ATHID 253 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETT-SC-CCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTT-CCEEE
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCcc-Cc-CCHHHHHHHHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhC-CCEEE
Confidence 356778899999999999998875431 10 0111123466778888877753222 22 356778899988 88764
Q ss_pred e
Q 015862 345 Y 345 (399)
Q Consensus 345 ~ 345 (399)
.
T Consensus 254 ~ 254 (423)
T 3ivs_A 254 T 254 (423)
T ss_dssp E
T ss_pred E
Confidence 3
No 492
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.95 E-value=19 Score=33.34 Aligned_cols=122 Identities=12% Similarity=-0.008 Sum_probs=77.4
Q ss_pred CCHHHHhhhHHHHHHHHHcCCeEEEecccCCCccCCCCCCCCCCCcccCCCCCCcccccCCCcccCCCCCCCCChhHHHH
Q 015862 101 WTKEQVEAWKPIVDAVHAKGGIFFCQIRHVGRVSNRDYQPNGQAPISCTDKPLTPQIRANGVDVAQFTPPRRLRTDEIPQ 180 (399)
Q Consensus 101 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~~~~~~aps~~~~~~~~~~~g~~~~~~~~p~~mt~~eI~~ 180 (399)
.-++.++..+++++.+|++|..+-.-|.+.+. +|.. . . .+
T Consensus 114 ~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~--------------~e~~----~-----------~-----~~------ 153 (295)
T 1ydn_A 114 TIAESIERLSPVIGAAINDGLAIRGYVSCVVE--------------CPYD----G-----------P-----VT------ 153 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEECSSE--------------ETTT----E-----------E-----CC------
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEEEec--------------CCcC----C-----------C-----CC------
Confidence 34678899999999999999998766765321 0000 0 0 11
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCc
Q 015862 181 IVNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFA 260 (399)
Q Consensus 181 ii~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~ 260 (399)
.+.+.+.++.+.++|.|.|-|.-.+|+ +. +....+++++||+.++..+|.+-..-+
T Consensus 154 -~~~~~~~~~~~~~~G~d~i~l~Dt~G~-----~~-----------------P~~~~~lv~~l~~~~~~~~l~~H~Hn~- 209 (295)
T 1ydn_A 154 -PQAVASVTEQLFSLGCHEVSLGDTIGR-----GT-----------------PDTVAAMLDAVLAIAPAHSLAGHYHDT- 209 (295)
T ss_dssp -HHHHHHHHHHHHHHTCSEEEEEETTSC-----CC-----------------HHHHHHHHHHHHTTSCGGGEEEEEBCT-
T ss_pred -HHHHHHHHHHHHhcCCCEEEecCCCCC-----cC-----------------HHHHHHHHHHHHHhCCCCeEEEEECCC-
Confidence 134566667778899999998866663 11 456789999999998533677755421
Q ss_pred ccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCc
Q 015862 261 NYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRM 296 (399)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~ 296 (399)
. +...+... ...++|++.++++-...
T Consensus 210 -~-----Gla~an~l----~Ai~aG~~~vd~sv~Gl 235 (295)
T 1ydn_A 210 -G-----GRALDNIR----VSLEKGLRVFDASVGGL 235 (295)
T ss_dssp -T-----SCHHHHHH----HHHHHTCCEEEEBTTCC
T ss_pred -c-----chHHHHHH----HHHHhCCCEEEeccccC
Confidence 1 22233222 22357999999875433
No 493
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=84.71 E-value=5.3 Score=37.42 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEe
Q 015862 183 NDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRL 256 (399)
Q Consensus 183 ~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrl 256 (399)
+.-.+.|+...++|+|.|+|.+-. +|.+.--=+.+.-.+-+..+|+++++.++ -+|+|.-
T Consensus 38 ~~a~~~a~~~v~~GAdiIDIGges-------------trPga~~v~~~eE~~rv~pvi~~l~~~~~-~piSIDT 97 (282)
T 1aj0_A 38 IDAVKHANLMINAGATIIDVGGES-------------TRPGAAEVSVEEELQRVIPVVEAIAQRFE-VWISVDT 97 (282)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSC-------------CSTTCCCCCHHHHHHHHHHHHHHHHHHCC-CEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCc-------------CCCCCCcCCHHHHHHHHHHHHHHHHhhcC-CeEEEeC
Confidence 344566788899999999999743 34432223567778888999999998763 2677643
No 494
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=84.53 E-value=9 Score=36.98 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=69.0
Q ss_pred HHHhCCC-----EEEEccccchhhhhcccCcccCCCCCCCCchhhhh---HHHHHHHHHHHHHhCCCceEEEecCCcccC
Q 015862 192 AIEAGFD-----GVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRC---RFALEIVEAVSNEIGADRVGIRLSPFANYM 263 (399)
Q Consensus 192 a~~aGfD-----gVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~---r~~~eii~avR~~vg~~~v~vrls~~~~~~ 263 (399)
|+++|.| +|.+..-. ...++++....++ +-++-.+. .|..|-++.+++.+-..=|.+=-++++
T Consensus 30 A~~aGad~~~d~avKfQt~~---~d~l~~~~~~~~~---~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~fD--- 100 (350)
T 3g8r_A 30 IRESCQGFDFDFGFKLQYRN---LDTFIHSSFKGRD---DVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFD--- 100 (350)
T ss_dssp HHHHTTTCCSEEEEEEEECC---HHHHBCGGGTTCC---SSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECS---
T ss_pred HHHhCCcccCCeeEEccccc---hhhhcChhccCcc---HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEeccCC---
Confidence 3456777 99976432 3444444321111 11222333 367777777777663211221113321
Q ss_pred CCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcCCcEEEeCCC-CHHH---HHHHHHcCC
Q 015862 264 ESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFKGTFLVAGGY-DRED---GNKAIAEGR 339 (399)
Q Consensus 264 ~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~~~L~~G~ 339 (399)
. .-++.|++.|++++-|..+.. .+..+++.+.+ ++.||+..-|. |.++ |.+++....
T Consensus 101 -------~----~svd~l~~~~v~~~KI~S~~~-------~N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g 161 (350)
T 3g8r_A 101 -------E----ESVDLIEAHGIEIIKIASCSF-------TDWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRG 161 (350)
T ss_dssp -------H----HHHHHHHHTTCCEEEECSSST-------TCHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred -------H----HHHHHHHHcCCCEEEECcccc-------cCHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcC
Confidence 1 224456778999999865532 24556776665 68999988887 7655 445555544
Q ss_pred CcEEE
Q 015862 340 ADLVV 344 (399)
Q Consensus 340 ~D~V~ 344 (399)
.+++.
T Consensus 162 ~~viL 166 (350)
T 3g8r_A 162 KDLTI 166 (350)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 78555
No 495
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=84.51 E-value=5.3 Score=38.68 Aligned_cols=146 Identities=8% Similarity=-0.059 Sum_probs=76.5
Q ss_pred HHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHH----HHHHHHHHHHHhC--CCceEEEecCC
Q 015862 186 RLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRF----ALEIVEAVSNEIG--ADRVGIRLSPF 259 (399)
Q Consensus 186 ~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~----~~eii~avR~~vg--~~~v~vrls~~ 259 (399)
.+..+.+..+||-+|++..-- +-.|--.|. -|--++-..+-||+-| +..+++.+++... ..+|.+-|..
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt--~~pq~GNp~--PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G- 135 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCT--PALREGNPT--PRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG- 135 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEEC--SSCBCCSCS--CCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-
T ss_pred HHHHHHHHHcCCCeEEeCccc--CcccCCCCC--CcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc-
Confidence 455566677899999987432 111111111 1222222233344211 2333444443321 1277776643
Q ss_pred cccCCCCCCChHHHHHHHHHhhh---hhCceEEEEeCCCccccccc------CCCchhhHHHHhhcCCcEEEeCC--CCH
Q 015862 260 ANYMESGDSNPEALGLYMAESLN---KYGILYCHMVEPRMKTREEK------SECPHSLLPMRKAFKGTFLVAGG--YDR 328 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le---~~Gvd~l~v~~~~~~~~~~~------~~~~~~~~~ir~~~~~pvi~~Gg--it~ 328 (399)
.+.++..+.++.++ +.|+|+|++--+.-...... ....+.++.+|+++++||++=-. ++.
T Consensus 136 ---------~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~ 206 (354)
T 4ef8_A 136 ---------LSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDF 206 (354)
T ss_dssp ---------SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSH
T ss_pred ---------CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCH
Confidence 24677888888888 56899987743211111000 01124567788889999875443 355
Q ss_pred HHH---HHHHHcCC-CcEEEe
Q 015862 329 EDG---NKAIAEGR-ADLVVY 345 (399)
Q Consensus 329 ~~a---~~~L~~G~-~D~V~~ 345 (399)
++. .+++++.. +|+|.+
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHHhCCCccEEEE
Confidence 443 33444555 998874
No 496
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=84.25 E-value=8.7 Score=38.23 Aligned_cols=68 Identities=7% Similarity=-0.095 Sum_probs=48.6
Q ss_pred hHHHHHHHHHh-hhhhCceEEEEeCCCcccccccCCCchhhHHHHhhcC-CcEEEeCCC--CHHHHHHHHHcCCCcEEEe
Q 015862 270 PEALGLYMAES-LNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAFK-GTFLVAGGY--DREDGNKAIAEGRADLVVY 345 (399)
Q Consensus 270 ~~~~~~~l~~~-Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~ 345 (399)
+.++++++.+. ++++++.+|+ .|. ....++..+.+++.++ +|+++-.-+ ++++++++|+.+.||.|-+
T Consensus 280 t~~elid~y~~lle~ypI~~IE--DPl------~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI 351 (441)
T 3qtp_A 280 DVDGLIAEYVDYGKHYPIASIE--DPF------AEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLI 351 (441)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--SCS------CTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHhhhcceeeec--CCC------ChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEe
Confidence 45666666544 6788877776 442 2235677788999996 776555444 5999999999999998876
No 497
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=84.22 E-value=4.8 Score=37.67 Aligned_cols=93 Identities=10% Similarity=-0.057 Sum_probs=61.2
Q ss_pred CCCChHHHHHHHHHhhhhhCceEEEEeCCCcccc---cccCCC----chhhHHHHhhcCCcEEEeCCCCHHHHHHHHHcC
Q 015862 266 GDSNPEALGLYMAESLNKYGILYCHMVEPRMKTR---EEKSEC----PHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEG 338 (399)
Q Consensus 266 ~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~---~~~~~~----~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G 338 (399)
+...+.+.+.+.++.+.+.|+|+|.|..-+-.+. ...... ...++.+++. ++|| ..--+.++.++.+|+.|
T Consensus 23 g~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~pi-SIDT~~~~va~aAl~aG 100 (280)
T 1eye_A 23 GCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITV-SIDTMRADVARAALQNG 100 (280)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCE-EEECSCHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEE-EEeCCCHHHHHHHHHcC
Confidence 3345678889999999999999999864221100 000111 1234445544 6665 44556799999999998
Q ss_pred CCcEEEechHHhhCCcHHHHHHh
Q 015862 339 RADLVVYGRLFLANPDLPRRFEL 361 (399)
Q Consensus 339 ~~D~V~~gR~~iadPdl~~k~~~ 361 (399)
+|+|==..+.-.||++..-+++
T Consensus 101 -a~iINdvsg~~~d~~m~~~~a~ 122 (280)
T 1eye_A 101 -AQMVNDVSGGRADPAMGPLLAE 122 (280)
T ss_dssp -CCEEEETTTTSSCTTHHHHHHH
T ss_pred -CCEEEECCCCCCCHHHHHHHHH
Confidence 8999888887679988776554
No 498
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=83.96 E-value=13 Score=38.00 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEccccchhhhhcccCcccCCCCCCCCchhhhhHHHHHHHHHHHHHhCCCceEEEecCCcc
Q 015862 182 VNDFRLAARNAIEAGFDGVELHGAHGYLIDQFLKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFAN 261 (399)
Q Consensus 182 i~~f~~aA~~a~~aGfDgVeIh~~~GyLl~qFlSp~~N~R~D~yGGslenR~r~~~eii~avR~~vg~~~v~vrls~~~~ 261 (399)
++.|+++ +.++|.|.|.|..+. |.. +-+.+.++.+|+. |. .+..-++...
T Consensus 119 ~~~~ve~---a~~aGvd~vrIf~s~--------sd~----------------~ni~~~i~~ak~~-G~-~v~~~i~~~~- 168 (539)
T 1rqb_A 119 VDRFVDK---SAENGMDVFRVFDAM--------NDP----------------RNMAHAMAAVKKA-GK-HAQGTICYTI- 168 (539)
T ss_dssp HHHHHHH---HHHTTCCEEEECCTT--------CCT----------------HHHHHHHHHHHHT-TC-EEEEEEECCC-
T ss_pred cHHHHHH---HHhCCCCEEEEEEeh--------hHH----------------HHHHHHHHHHHHC-CC-eEEEEEEeee-
Confidence 4555544 457899999987543 111 3357778888765 32 2322333321
Q ss_pred cCCCCCCChHHHHHHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc--CCcEEEeC----CCCHHHHHHHH
Q 015862 262 YMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF--KGTFLVAG----GYDREDGNKAI 335 (399)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G----git~~~a~~~L 335 (399)
+...+.+...++++.+.++|++.|.+.... + ...+....+.++.+++.+ ++|+-.=. |.-...+..++
T Consensus 169 ----~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~-G-~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAv 242 (539)
T 1rqb_A 169 ----SPVHTVEGYVKLAGQLLDMGADSIALKDMA-A-LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAI 242 (539)
T ss_dssp ----STTCCHHHHHHHHHHHHHTTCSEEEEEETT-C-CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHcCCCEEEeCCCC-C-CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHH
Confidence 113367889999999999999998875321 1 001112335677888888 56653322 22367788899
Q ss_pred HcCCCcEEE-----echHHhhCCcHHHH
Q 015862 336 AEGRADLVV-----YGRLFLANPDLPRR 358 (399)
Q Consensus 336 ~~G~~D~V~-----~gR~~iadPdl~~k 358 (399)
+.| ||.|- +|.. ..|+++-.-
T Consensus 243 eAG-a~~VD~ti~g~Ger-tGN~~lE~l 268 (539)
T 1rqb_A 243 EAG-VDVVDTAISSMSLG-PGHNPTESV 268 (539)
T ss_dssp HTT-CSEEEEBCGGGCST-TSBCBHHHH
T ss_pred HhC-CCEEEEeccccCCC-ccChhHHHH
Confidence 998 88774 3433 557766444
No 499
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=83.77 E-value=7 Score=37.97 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhCCCEEEEccccchhhhh--cccCcccCCCCCCCC-chhhhhHHHHHHHHHHHHHhCCC-ceEEEecCC
Q 015862 184 DFRLAARNAIEAGFDGVELHGAHGYLIDQ--FLKDQVNDRTDQYGG-SLENRCRFALEIVEAVSNEIGAD-RVGIRLSPF 259 (399)
Q Consensus 184 ~f~~aA~~a~~aGfDgVeIh~~~GyLl~q--FlSp~~N~R~D~yGG-slenR~r~~~eii~avR~~vg~~-~v~vrls~~ 259 (399)
+..+.|+.+.++|+|+|-+|..- +++ -..|. -..++|| |-..-.....++|..|+++++.+ +|.. +.
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt---~~r~~~~~~~---~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~--~G- 305 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTT---VSRPAGLQGA---LRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG--VG- 305 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCB---SCCCTTCCCT---TTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE--ES-
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC---cccccccccc---cccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE--EC-
Confidence 45666777889999999988442 110 00010 0124454 22222235679999999999744 4332 11
Q ss_pred cccCCCCCCChHHHHHHHHHhhhhhCceEEEEeCC
Q 015862 260 ANYMESGDSNPEALGLYMAESLNKYGILYCHMVEP 294 (399)
Q Consensus 260 ~~~~~~~~~~~~~~~~~l~~~Le~~Gvd~l~v~~~ 294 (399)
+-.+.+++.++ |+ +|+|.+-+..+
T Consensus 306 -------GI~s~~da~~~---l~-~GAd~V~vgra 329 (367)
T 3zwt_A 306 -------GVSSGQDALEK---IR-AGASLVQLYTA 329 (367)
T ss_dssp -------SCCSHHHHHHH---HH-HTCSEEEESHH
T ss_pred -------CCCCHHHHHHH---HH-cCCCEEEECHH
Confidence 22244544433 33 69999887543
No 500
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.63 E-value=1.2 Score=44.84 Aligned_cols=66 Identities=21% Similarity=0.251 Sum_probs=48.6
Q ss_pred HHHHHhhhhhCceEEEEeCCCcccccccCCCchhhHHHHhhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEec
Q 015862 275 LYMAESLNKYGILYCHMVEPRMKTREEKSECPHSLLPMRKAF-KGTFLVAGGY-DREDGNKAIAEGRADLVVYG 346 (399)
Q Consensus 275 ~~l~~~Le~~Gvd~l~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 346 (399)
.+.++.+.+.|+|.+.++.. .. .....++.++.+++.+ ++|++ .|++ +.+.+..+++.| +|+|.+|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a-~g---~~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~G-ad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA-HG---HSAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAG-VDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS-CT---TCHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeee-cC---cchhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcC-CCEEEEC
Confidence 45677788889999887541 11 0112345678888888 78988 5666 999999999998 9999776
Done!