BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015867
(399 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 240/354 (67%), Gaps = 20/354 (5%)
Query: 49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
+DD EGH ++++G+ L RY+I+S +GEGTFGRV++C D R+ RVA+K+++++ KY++
Sbjct: 16 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
AA +EI+VL+ + + D + CVQ+ +WFDY H+CI FE LG S FDFLK N Y P+P
Sbjct: 76 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
+ VR QL ++V ++HD +L HTDLKPENIL V+S++ ++
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSV----- 190
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
KS+A++++DFGS FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E G
Sbjct: 191 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
LFQTH+N EHLAMMER LGP+P MIR+ + +KYF RG RL+W E G RE+
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENC 307
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
K +++ L + H L DL+ +L Y+P++RLT +AL HPFF L
Sbjct: 308 KPLRRY--LTSEAEEH-----HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 20/355 (5%)
Query: 49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
+DD+EGH V +G+ L RY+I+ +GEGTFG+V+EC D + + +VA+K++R++ KYR+
Sbjct: 34 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 93
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
AA +EI+VL+ + + DK CV + +WF++ H+CI FE LG + F+FLK N + P+P
Sbjct: 94 AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 153
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
+ VR QL ++ ++H+ +L HTDLKPENIL V+SEF L +S +
Sbjct: 154 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 208
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
K+++I++ DFGS FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E G
Sbjct: 209 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 268
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
LFQTHEN EHL MME+ LGP+P HMI R + +KYF +G L W E G +E+
Sbjct: 269 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 325
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
K +K M+ ++ + L DL+ +L +DP++R+T +AL HPFF L
Sbjct: 326 KPLKSY-----MLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 373
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 230/355 (64%), Gaps = 20/355 (5%)
Query: 49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
+DD+EGH V +G+ L RY+I+ +GEGTFG+V+EC D + + +VA+K++R++ KYR+
Sbjct: 11 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 70
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
AA +EI+VL+ + + DK CV + +WF++ H+CI FE LG + F+FLK N + P+P
Sbjct: 71 AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 130
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
+ VR QL ++ ++H+ +L HTDLKPENIL V+SEF L +S +
Sbjct: 131 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 185
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
K+++I++ DFGS FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E G
Sbjct: 186 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
LFQTHEN EHL MME+ LGP+P HMI R + +KYF +G L W E G +E+
Sbjct: 246 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 302
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
K +K L L DL+ +L +DP++R+T +AL HPFF L
Sbjct: 303 KPLKS-------YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 350
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 230/354 (64%), Gaps = 20/354 (5%)
Query: 49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
+DD+EGH V +G+ L RY+I+ +GEGTFG+V+EC D + + +VA+K++R++ KYR+
Sbjct: 2 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 61
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
AA +EI+VL+ + + DK CV + +WF++ H+CI FE LG + F+FLK N + P+P
Sbjct: 62 AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 121
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
+ VR QL ++ ++H+ +L HTDLKPENIL V+SEF L +S +
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 176
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
K+++I++ DFGS FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E G
Sbjct: 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
LFQTHEN EHL MME+ LGP+P HMI R + +KYF +G L W E G +E+
Sbjct: 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 293
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
K +K L L DL+ +L +DP++R+T +AL HPFF L
Sbjct: 294 KPLKS-------YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/344 (46%), Positives = 226/344 (65%), Gaps = 18/344 (5%)
Query: 55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEI 113
H + G+ L+ RY+I+ +GEG FG+V+EC D + R VA+K+V+++ +Y +AA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
VL+HL D + CVQ+ WF++ HICIVFE LG S +DF+K N + PF +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PGYKRSSSGEMPFRCLPKSSA 231
Q+ +SV ++H +L HTDLKPENIL V S++ + P KR + +
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI-------NPD 175
Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
IK++DFGS +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E G +F
Sbjct: 176 IKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIKAVKKLD 350
TH++ EHLAMMER LGPLP+HMI++ + KYF RL+W E + R +A K L
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSRACKPLK 292
Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
M+S V+ R L DL+ +L YDP++R+T R+AL HPFF
Sbjct: 293 EF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 224/344 (65%), Gaps = 18/344 (5%)
Query: 55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEI 113
H + G+ L+ RY+I+ +GEG FG+V+EC D + R VA+K+V+++ +Y +AA EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
VL+HL D + CVQ+ WF++ HICIVFE LG S +DF+K N + PF +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PGYKRSSSGEMPFRCLPKSSA 231
Q+ +SV ++H +L HTDLKPENIL V S++ + P KR + +
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI-------NPD 175
Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
IK++DFGS +D+++HS++V RHYRAPEVIL LGWS PCD+WS+GCIL+E G +F
Sbjct: 176 IKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIKAVKKLD 350
TH++ EHLAMMER LGPLP+HMI++ + KYF RL+W E + R +A K L
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSRACKPLK 292
Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
M+S V+ R L DL+ +L YDP++R+T R+AL HPFF
Sbjct: 293 EF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 210/348 (60%), Gaps = 10/348 (2%)
Query: 50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
DD H+ + G L + ++ KMG+GTFGRVL C ++ A+KVVR+I+KY +A
Sbjct: 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
IE D+L+ + +ND +++ V+ F Y +H+C++FE LGPSL++ + RN Y F ++
Sbjct: 79 KIEADILKKI-QNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIE 137
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK-LPGYKRSSSGEMPFRCLPK 228
++ + ++L+++ Y+ + L HTDLKPENILL F K L +R + G+ K
Sbjct: 138 DIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA 288
S+ IKLIDFG F + H SI++TR YRAPEVIL LGW DMWS GC+L EL TG
Sbjct: 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257
Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGT-EKYFRRGS-RLNWPEGAVSRESIKAV 346
LF+THE++EHLAMME + P+P++M+ A++ KY + +L WPE A S SIK V
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KK L ++ D L+ +L+ DP+ R + + L H F
Sbjct: 318 KKCLPLYKIIK------HELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 189/372 (50%), Gaps = 65/372 (17%)
Query: 50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
DD +G YV +++ RY++L +G+G+FG+V++ +D + + VA+K+VR+ +++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
EI +L+HL K DK + + + + F +RNHIC+ FE L +L++ +K+NK+ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
LVR+F +L+ + +H R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
S IK+IDFGS+ +++Q + + +R YRAPEVILG + P DMWS+GCIL EL TG L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
+ + LA M LG +P + AS+ + +
Sbjct: 299 LPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
RRG PE SRE A+K D D L L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
T QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 189/372 (50%), Gaps = 65/372 (17%)
Query: 50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
DD +G YV +++ RY++L +G+G+FG+V++ +D + + VA+K+VR+ +++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
EI +L+HL K DK + + + + F +RNHIC+ FE L +L++ +K+NK+ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
LVR+F +L+ + +H R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
S IK+IDFGS+ +++Q + + +R YRAPEVILG + P DMWS+GCIL EL TG L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
+ + LA M LG +P + AS+ + +
Sbjct: 299 LPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
RRG PE SRE A+K D D L L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
T QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 187/372 (50%), Gaps = 65/372 (17%)
Query: 50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
DD +G YV +++ RY++L +G+G FG+V++ +D + + VA+K+VR+ +++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
EI +L+HL K DK + + + + F +RNHIC+ FE L +L++ +K+NK+ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
LVR+F +L+ + +H R+IH DLKPENILL
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
S IK+IDFGS+ +++Q + +R YRAPEVILG + P DMWS+GCIL EL TG L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
+ + LA M LG +P + AS+ + +
Sbjct: 299 LPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
RRG PE SRE A+K D D L L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
T QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 50/357 (14%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
GE RY+I S +G+G+FG+V++ +DR QE VAIK++++ + + + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K+D + V ++ F +RNH+C+VFE L +L+D L+ + ++L R+F +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++ ++ +L +IH DLKPENILL C PK SAIK++DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRSAIKIVDFG 206
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
S+ Q + +R YR+PEV+LG+ + DMWS+GCILVE+ TGE LF ++
Sbjct: 207 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 266
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
+ + LG P H++ +A + K+F + P+G + + K K+ +L
Sbjct: 267 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
N++ + H DL+ +L YDP R+ AL H FF+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 50/357 (14%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
GE RY+I S +G+G+FG+V++ +DR QE VAIK++++ + + + A IE+ +L+ +
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K+D + V ++ F +RNH+C+VFE L +L+D L+ + ++L R+F +Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++ ++ +L +IH DLKPENILL C PK SAIK++DFG
Sbjct: 150 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRSAIKIVDFG 187
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
S+ Q + +R YR+PEV+LG+ + DMWS+GCILVE+ TGE LF ++
Sbjct: 188 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 247
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
+ + LG P H++ +A + K+F + P+G + + K K+ +L
Sbjct: 248 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 301
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
N++ + H DL+ +L YDP R+ AL H FF+
Sbjct: 302 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 188/357 (52%), Gaps = 50/357 (14%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
GE RY+I S +G+G+FG+V++ +DR QE VAIK++++ + + + A IE+ +L+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K+D + V ++ F +RNH+C+VFE L +L+D L+ + ++L R+F +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++ ++ +L +IH DLKPENILL C PK AIK++DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRXAIKIVDFG 206
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
S+ Q + +R YR+PEV+LG+ + DMWS+GCILVE+ TGE LF ++
Sbjct: 207 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 266
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
+ + LG P H++ +A + K+F + P+G + + K K+ +L
Sbjct: 267 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
N++ + H DL+ +L YDP R+ AL H FF+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 46/382 (12%)
Query: 52 REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI 111
+ G++ +G+ RY ++ K+G G F V CWD Q + VA+KVV+S + Y + A+
Sbjct: 17 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNKYCP 165
EI +L+ + ++D + + ++ D++ H+C+VFE LG L ++ ++ Y
Sbjct: 77 EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 166 FPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILL-VSSEFIK-------------L 210
PV V+ RQ+L+ + Y+H ++IHTD+KPENIL+ V +++
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 211 PGYKRSSSGEMPFRCL------PKSSA---IKLIDFGSTAFDNQNHSSIVSTRHYRAPEV 261
P S+ P L P+++ +K+ D G+ + +++ + + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 262 ILGLGWSYPCDMWSVGCILVELCTGEALFQTHE------NLEHLAMMERALGPLPEHMIR 315
++G G+S P D+WS C+ EL TG+ LF+ H + +H+A + LG +P H
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 316 RASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL-HVDRARSTLTDLLHGL 374
E + RRG + +K D L H D A+ TD L +
Sbjct: 317 SGKYSREFFNRRGELRH-------ITKLKPWSLFDVLVEKYGWPHEDAAQ--FTDFLIPM 367
Query: 375 LRYDPSERLTARQALNHPFFRN 396
L P +R +A + L HP+ +
Sbjct: 368 LEMVPEKRASAGECLRHPWLNS 389
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 198/396 (50%), Gaps = 58/396 (14%)
Query: 49 DDDRE--------GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR 100
DD++E G+++ +G+ RY ++ K+G G F V WD Q ++ VA+KVV+
Sbjct: 12 DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71
Query: 101 SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSL 154
S Y + A+ EI +L+ + +D + + ++ D++ HIC+VFE LG L
Sbjct: 72 SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 131
Query: 155 FDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILL-VSSEFIK--- 209
++ ++ Y P+ V++ +Q+L+ + Y+H R+IHTD+KPENILL V+ ++I+
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 210 --LPGYKRS---------------SSGEMPFRCL-PKSS---AIKLIDFGSTAFDNQNHS 248
++RS ++G L PK++ +K+ D G+ + +++ +
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT 251
Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE------HLAMM 302
+ TR YR+ EV++G G++ P D+WS C+ EL TG+ LF+ H E H+A++
Sbjct: 252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 311
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH--V 360
LG +P +I E + ++G + I +K + +V +
Sbjct: 312 IELLGKVPRKLIVAGKYSKEFFTKKG----------DLKHITKLKPWGLFEVLVEKYEWS 361
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ TD L +L P +R TA + L HP+ +
Sbjct: 362 QEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 195/388 (50%), Gaps = 50/388 (12%)
Query: 49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA 108
D + G+++ +G+ RY ++ K+G G F V WD Q ++ VA+KVV+S Y +
Sbjct: 4 DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 109 AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNK 162
A+ EI +L+ + +D + + ++ D++ HIC+VFE LG L ++ ++
Sbjct: 64 ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 123
Query: 163 YCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILL-VSSEFIK-----LPGYKR 215
Y P+ V++ +Q+L+ + Y+H R+IHTD+KPENILL V+ ++I+ ++R
Sbjct: 124 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR 183
Query: 216 S---------------SSGEMPFRCL-PKSS---AIKLIDFGSTAFDNQNHSSIVSTRHY 256
S ++G L PK++ +K+ D G+ + +++ + + TR Y
Sbjct: 184 SGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQY 243
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE------HLAMMERALGPLP 310
R+ EV++G G++ P D+WS C+ EL TG+ LF+ H E H+A++ LG +P
Sbjct: 244 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 303
Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH--VDRARSTLT 368
+I E + ++G + I +K + +V + + T
Sbjct: 304 RKLIVAGKYSKEFFTKKG----------DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
D L +L P +R TA + L HP+ +
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLNS 381
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 54/352 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-----AK 121
RY ++ K+G G F V D VA+K+VR + Y +AA EI +LQ + K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 122 NDKGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
D G++H +++ + F+++ H+ +VFE LG +L +K+ ++ P+ V++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 178 LLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
LL + YMH +IHTD+KPEN+L+ E + P IK+ D
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSP---------------ENLIQIKIAD 181
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-- 294
G+ + ++++++ + TR YR+PEV+LG W D+WS C++ EL TG+ LF+ E
Sbjct: 182 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 295 ----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG-----SRLN-WPEGAVSRESIK 344
+ +H+A + LG LP +++R + RG S+L WP V E K
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
K D A+ ++D L +L+ DP +R A +NHP+ ++
Sbjct: 302 FSK-------------DEAKE-ISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 54/352 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-----AK 121
RY ++ K+G G F V D VA+K+VR + Y +AA EI +LQ + K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 122 NDKGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
D G++H +++ + F+++ H+ +VFE LG +L +K+ ++ P+ V++ +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 178 LLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
LL + YMH +IHTD+KPEN+L+ E + P IK+ D
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSP---------------ENLIQIKIAD 181
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-- 294
G+ + ++++++ + TR YR+PEV+LG W D+WS C++ EL TG+ LF+ E
Sbjct: 182 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 295 ----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG-----SRLN-WPEGAVSRESIK 344
+ +H+A + LG LP +++R + RG S+L WP V E K
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
K D A+ ++D L +L+ DP +R A +NHP+ ++
Sbjct: 302 FSK-------------DEAKE-ISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L DF+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKPEN LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L DF+ + P+ L++ + QLL+ +A+
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 163/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L DF+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
H R++H DLKP+N LL+++E AIKL DFG +
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 66
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 67 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 126 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 161
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 222 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 264
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 265 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 299
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKPEN LL+++E AIKL DFG + AF
Sbjct: 122 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKPEN LL+++E AIKL DFG + AF
Sbjct: 120 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKPEN LL+++E AIKL DFG + AF
Sbjct: 121 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKPEN LL+++E AIKL DFG + AF
Sbjct: 120 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 63
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 64 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 123 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 158
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 159 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 219 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 261
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 262 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 296
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 156 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 167/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 66
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 67 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
H R++H DLKP+N LL+++E AIKL DFG +
Sbjct: 126 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 161
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 222 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 264
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 265 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE + L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 166/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
H R++H DLKP+N LL+++E AIKL DFG +
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 62 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 63
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 64 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 123 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 158
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 159 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 219 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 261
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 262 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
H R++H DLKP+N LL+++E AIKL DFG +
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE + L F+ + P+ L++ + QLL+ +A+
Sbjct: 63 -NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 61 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + ++P+ A ++ K V LD
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +++
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 58/336 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+K +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ + V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ RS L+ +LH YDP++R++A+ AL HPFF++
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+ +R A+ EI +L+ L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 60 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
++ + K+GEGT+G V + ++ T E VA+ +R A+ EI +L+ L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + N + +VFE L L F+ + P+ L++ + QLL+ +A+
Sbjct: 59 -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
H R++H DLKP+N LL+++E AIKL DFG + AF
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
+ ++ V T YRAPE++LG +S D+WS+GCI E+ T ALF ++ L
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG P+ ++ Y + S W S K V LD
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ RS L+ +LH YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 63/343 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y+ + K+GEG++G V +C +R T + VAIK + D +I+ L+ + +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQLK 60
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ V + F + + +VFE ++ L R + P LV+ Q L++V + H
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCH 119
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-------- 238
IH D+KPENIL+ K S IKL DFG
Sbjct: 120 KHNCIHRDVKPENILIT------------------------KHSVIKLCDFGFARLLTGP 155
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
S +D++ V+TR YR+PE+++G + P D+W++GC+ EL +G L+ +++
Sbjct: 156 SDYYDDE-----VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD 210
Query: 298 HLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
L ++ + LG L P H + T +YF G ++ PE E
Sbjct: 211 QLYLIRKTLGDLIPRH---QQVFSTNQYFS-GVKIPDPEDMEPLE--------------- 251
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
L LL G L DP+ERLT Q L+HP+F N+ E
Sbjct: 252 -LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + S +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + S +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + S +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 96
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 153
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 189
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 250 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 291
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 292 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 88
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 145
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 242 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 283
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 284 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 88
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 145
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 242 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 283
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 284 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 76 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 132
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 168
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 229 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 270
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 271 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 100
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 193
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 254 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 296 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 96
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 153
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 189
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 250 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 291
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 292 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 74
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 131
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 167
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 228 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 269
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 270 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ L+ +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 87
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 88 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 241 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 282
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 283 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 77 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 133
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 169
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 230 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 271
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 272 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 74
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 131
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 167
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 228 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 269
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 270 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 100
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 193
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 254 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 296 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 59/341 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
+Y+ ++++GEG +G+V + D + R VA+K VR + + E+ VL+HL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ C R D + +VFE + L +L + P + +++ QL
Sbjct: 72 EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
L + ++H R++H DLKP+NIL+ SS IKL G R S +M
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
+S+V T YRAPEV+L ++ P D+WSVGCI E+ + LF+ ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
+ L + +G LP G E + R + P A +S + ++K
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
V DLL L ++P++R++A AL+HP+F++L
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 60/342 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D ++ ++A+K ++ + R YR E+ +L+H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 106
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 163
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DFG
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 199
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF +++
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L + R G P +I R +R I ++ ++ + +N
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHE-----------------ARNYINSLPQMPK-RNFAD 301
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+ + A DLL +L D +R+TA +AL HP+F ++
Sbjct: 302 VFIG-ANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++D+G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDYG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 59/342 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
+Y+ ++++GEG +G+V + D + R VA+K VR + + E+ VL+HL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ C R D + +VFE + L +L + P + +++ QL
Sbjct: 72 EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
L + ++H R++H DLKP+NIL+ SS IKL G R S +M
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
+S+V T YRAPEV+L ++ P D+WSVGCI E+ + LF+ ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
+ L + +G LP G E + R + P A +S + ++K
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
V DLL L ++P++R++A AL+HP+F++L
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 58/339 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDK 124
++K L K+G GT+ V + ++ T VA+K V+ S A+ EI +++ L +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN- 64
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP----VDLVREFGRQLLE 180
V++ + N + +VFE + L ++ P ++LV+ F QLL+
Sbjct: 65 -----IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
+A+ H+ +++H DLKP+N+L + K +KL DFG
Sbjct: 120 GLAFCHENKILHRDLKPQNLL------------------------INKRGQLKLGDFGLA 155
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL 296
+ SS V T YRAP+V++G +S D+WS GCIL E+ TG+ LF +
Sbjct: 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
E L ++ +G P + + KY +I+ D L+ ++
Sbjct: 216 EQLKLIFDIMG-TPNESLWPSVTKLPKY---------------NPNIQQRPPRD-LRQVL 258
Query: 357 SLHVDRA-RSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
H L D LHGLL+ +P RL+A+QAL+HP+F
Sbjct: 259 QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++DF
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFY 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++ FG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILGFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 157/376 (41%), Gaps = 90/376 (23%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-- 119
E + +Y + +G G+FG V E +D ++ +R A+K V +Y++ + + VL H+
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
Query: 120 ----------------------------AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
KN+ + H I N ++ ++ E +
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNP-SQNKYLNVIMEYVP 121
Query: 152 PSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
+L LK P++L+ + QL +V ++H L + H D+KP+N+L+ S
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS----- 176
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILGLGW 267
K + +KL DFGS ++ + + +R YRAPE++LG
Sbjct: 177 ------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE 218
Query: 268 SYP-CDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYF 325
P D+WS+GC+ EL G+ LF +++ L + + +G P E MIR TE F
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRF 278
Query: 326 RRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
+W PEG S DLL +LRY+P
Sbjct: 279 PTLKAKDWRKILPEG--------------------------TPSLAIDLLEQILRYEPDL 312
Query: 382 RLTARQALNHPFFRNL 397
R+ +A+ HPFF +L
Sbjct: 313 RINPYEAMAHPFFDHL 328
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDAG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 59/339 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
+Y+ ++++GEG +G+V + D + R VA+K VR + + E+ VL+HL
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ C R D + +VFE + L +L + P + +++ QL
Sbjct: 72 EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
L + ++H R++H DLKP+NIL+ SS IKL G R S +M
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
+S+V T YRAPEV+L ++ P D+WSVGCI E+ + LF+ ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
+ L + +G LP G E + R + P A +S + ++K
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
V DLL L ++P++R++A AL+HP+F+
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDGG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
RY+ LS +G G +G V +D +T RVA+K ++ + R YR E+ +L+H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + G + N + +V +G L + +K K D V+ Q+
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDRG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + V+TR YRAPE++L + ++ D+WSVGCI+ EL TG LF ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
L ++ R +G ++++ S + +R I+++ ++ ++ N +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + A DLL +L D +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 50/336 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRK--YRDAAMIEIDVLQHLAKNDK 124
Y+ L +G G +G V D +T +VAIK + R + + A E+ +L+H+ +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
G D +V +G L +K K D ++ Q+L+ + Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE---DRIQFLVYQMLKGLRY 143
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H +IH DLKP N+ + + +K++DFG +
Sbjct: 144 IHAAGIIHRDLKPGNL------------------------AVNEDCELKILDFGLARQAD 179
Query: 245 QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
V TR YRAPEVIL + ++ D+WSVGCI+ E+ TG+ LF+ ++L+ L +
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
+ G P ++R K + +G PE + ++ ++ L N L V
Sbjct: 240 KVTGTPPAEFVQRLQSDEAKNYMKG----LPE--LEKKDFASI-----LTNASPLAV--- 285
Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+LL +L D +R+TA +AL HP+F +L++
Sbjct: 286 -----NLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 158/359 (44%), Gaps = 87/359 (24%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
GE Y +G G+FG V + ++ E VAIK V +++++ + + +++H
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKH-- 91
Query: 121 KNDKGGSSHCVQIRNWFDYRN-------HICIVFEKLGPSLF----DFLKRNKYCPFPVD 169
+ V ++ +F Y N + +V E + +++ + K + P+
Sbjct: 92 -------PNVVDLKAFF-YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT--MPML 141
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
L++ + QLL S+AY+H + + H D+KP+N+LL P S
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD-----------------------PPS 178
Query: 230 SAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTG 286
+KLIDFGS + + S + +R+YRAPE+I G ++ D+WS GC++ EL G
Sbjct: 179 GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
+ LF ++ L + + L G SRE IK +
Sbjct: 239 QPLFPGESGIDQLVEIIKVL-----------------------------GTPSREQIKTM 269
Query: 347 K------KLDRLKNMVSLHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
K +++ V R R+ DL+ LL Y PS RLTA +AL HPFF L
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 146/337 (43%), Gaps = 55/337 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD--AAMIEIDVLQHLAKNDKG 125
Y L K+GEGT+ V + + T VA+K +R + A+ E+ +L+ L
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK----- 58
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESVA 183
++ V + + + +VFE L L +L C +++ V+ F QLL +A
Sbjct: 59 -HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLA 114
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
Y H +++H DLKP+N+L+ +KL + + + +P + +D
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP----------------TKTYD 158
Query: 244 NQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
N+ V T YR P+++LG +S DMW VGCI E+ TG LF E L +
Sbjct: 159 NE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
R LG E WP G +S E K + H R
Sbjct: 214 FRILGTPTEE-------------------TWP-GILSNEEFKTYNYPKYRAEALLSHAPR 253
Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
S DLL LL+++ R++A A+ HPFF +L E
Sbjct: 254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 30/347 (8%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
+Y+++ K+G+G +G V + DR+T E VA+K + + + DA EI +L L+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS--- 66
Query: 124 KGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
G + V + N D + +VF+ + L ++ N P V QL++
Sbjct: 67 --GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKV 121
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL-IDFGST 240
+ Y+H L+H D+KP NILL + +K+ + S S R ++ I L I+ +
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV---TNNIPLSINENTE 178
Query: 241 AFDNQNH--SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
FD+ + V+TR YRAPE++LG ++ DMWS+GCIL E+ G+ +F +
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK--AVKKLDRLKNM 355
L ER +G + + + F + + E R+S K K L
Sbjct: 239 QL---ERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF---FRNLNE 399
++ D L DLL LL+++P++R++A AL HPF F N NE
Sbjct: 295 INPKADCNEEAL-DLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE 340
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 69/336 (20%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKV--------VRSIRKYRDAAMIEIDVLQHLAKND 123
+ +G G +G V D+++ E+VAIK + + R YR E+ +L+H+ +
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-----ELLLLKHMQHEN 102
Query: 124 KGG----SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + +RN++D F + P + L++ F + ++ Q+L
Sbjct: 103 VIGLLDVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
+ + Y+H ++H DLKP N+ + + +K++DFG
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNL------------------------AVNEDCELKILDFGL 190
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ + V TR YRAPEVIL + ++ D+WSVGCI+ E+ TG+ LF+ + L+
Sbjct: 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
L + + G +P GTE +LN ++ I+++ + R K+ L
Sbjct: 251 LTQILKVTG-VP---------GTEFV----QKLN---DKAAKSYIQSLPQTPR-KDFTQL 292
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
RA DLL +L D +RLTA QAL HPFF
Sbjct: 293 -FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 69/336 (20%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKV--------VRSIRKYRDAAMIEIDVLQHLAKND 123
+ +G G +G V D+++ E+VAIK + + R YR E+ +L+H+ +
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-----ELLLLKHMQHEN 84
Query: 124 KGG----SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + +RN++D F + P + L++ F + ++ Q+L
Sbjct: 85 VIGLLDVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
+ + Y+H ++H DLKP N+ + + +K++DFG
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNL------------------------AVNEDCELKILDFGL 172
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ + V TR YRAPEVIL + ++ D+WSVGCI+ E+ TG+ LF+ + L+
Sbjct: 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
L + + G +P GTE +LN ++ I+++ + R K+ L
Sbjct: 233 LTQILKVTG-VP---------GTEFV----QKLN---DKAAKSYIQSLPQTPR-KDFTQL 274
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
RA DLL +L D +RLTA QAL HPFF
Sbjct: 275 -FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 155/342 (45%), Gaps = 66/342 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L K+GEGT+G V + +R+T E VA+K VR +A+ EI +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLES 181
+ V++ + + +VFE L + C +D +V+ F QLL+
Sbjct: 60 ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKG 113
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ + H ++H DLKP+N+L+ + +KL + + + +P RC
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC---------------- 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
+S+ V T YR P+V+ G +S DMWS GCI EL G LF ++ + L
Sbjct: 158 -----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRL----NWPEGAVSRESIKAVKKLDRLKNM 355
+ R LG TE+ + ++L +P + + V KL+
Sbjct: 213 KRIFRLLG-----------TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN----- 256
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
+T DLL LL+ +P +R++A +AL HP+F +
Sbjct: 257 ---------ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 86/352 (24%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMI 111
G ++ + +L+ Y+ + K+G G +G VL C D+ T AIK++R S+ ++ ++
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 112 E-IDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPV 168
E + VL+ L + +++ ++F D RN+ ++ G LFD + R K+
Sbjct: 85 EEVAVLKLL------DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
++ +Q+L V Y+H ++H DLKPEN+LL S E K
Sbjct: 139 AVII---KQVLSGVTYLHKHNIVHRDLKPENLLLESKE---------------------K 174
Query: 229 SSAIKLIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ IK++DFG S F+NQ + T +Y APEV L + CD+WS+G IL L G
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAG 233
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
F G + ++R+ +G KY F N EGA
Sbjct: 234 YPPFG---------------GQTDQEILRKVEKG--KYTFDSPEWKNVSEGA-------- 268
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
DL+ +L++D R++A+QAL HP+ + +
Sbjct: 269 ----------------------KDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 66/342 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L K+GEGT+G V + +R+T E VA+K VR +A+ EI +L+ L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLES 181
+ V++ + + +VFE L + C +D +V+ F QLL+
Sbjct: 60 ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKG 113
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ + H ++H DLKP+N+L+ + +KL + + + +P RC
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC---------------- 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
+S+ V T YR P+V+ G +S DMWS GCI EL LF ++ + L
Sbjct: 158 -----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRL----NWPEGAVSRESIKAVKKLDRLKNM 355
+ R LG TE+ + ++L +P + + V KL+
Sbjct: 213 KRIFRLLG-----------TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN----- 256
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
+T DLL LL+ +P +R++A +AL HP+F +
Sbjct: 257 ---------ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 63/346 (18%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQH 118
+ L +Y+ L K+GEGT+G V + D Q + VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L + V + + + +VFE + L L NK ++ + QL
Sbjct: 76 LHH------PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L VA+ H R++H DLKP+N+L+ S +KL + + + +P R
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-------------- 174
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+++ V T YRAP+V++G +S D+WS+GCI E+ TG+ LF + +
Sbjct: 175 -------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 298 HLAMMERALG-PLPEH--MIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDRL 352
L + LG P P ++ ++ F+ + W +E I
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI--------- 278
Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
DLL +L +DP++R++AR A+NHP+F++L+
Sbjct: 279 ----------------DLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 151/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ ++ + +V +G L+ LK D + F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKD-VYLVTHLMGADLYKLLKTQH---LSNDHICYF 149
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 185
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 246 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 276
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 63/346 (18%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQH 118
+ L +Y+ L K+GEGT+G V + D Q + VA+K +R A+ EI +L+
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L + V + + + +VFE + L L NK ++ + QL
Sbjct: 76 LHH------PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L VA+ H R++H DLKP+N+L+ S +KL + + + +P R
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-------------- 174
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+++ V T YRAP+V++G +S D+WS+GCI E+ TG+ LF + +
Sbjct: 175 -------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 298 HLAMMERALG-PLPEH--MIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDRL 352
L + LG P P ++ ++ F+ + W +E I
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI--------- 278
Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
DLL +L +DP++R++AR A+NHP+F++L+
Sbjct: 279 ----------------DLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 63/348 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
R+++ G+GTFG V ++ T VAIK V ++R+ E+ ++Q LA
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHH-- 78
Query: 127 SSHCVQIRNWF------DYRNHICIVFEKLGPSLFDFLKRNKY----CPFPVDLVREFGR 176
+ VQ++++F D R+ V + P RN Y P P+ L++ F
Sbjct: 79 -PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI-LIKVFLF 136
Query: 177 QLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
QL+ S+ +H + + H D+KP N+L+ ++ +KL
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD-----------------------GTLKL 173
Query: 235 IDFGSTA--FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ 291
DFGS ++ + + + +R+YRAPE+I G ++ D+WSVGCI E+ GE +F+
Sbjct: 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ L + R LG ++R +LN V + K +
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLR--------------KLNPSHTDVDLYNSKGIP---- 275
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
N+ S H + DLL LL+Y P ER+ +AL HP+F L++
Sbjct: 276 WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 146/340 (42%), Gaps = 84/340 (24%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
RY I+ +G+G+FG VL+C DR TQ+ A+KV+ ++ K +D + I E+++L+ L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
+ +++ + + IV E G LFD +KR ++ D R +Q
Sbjct: 79 ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + YMH ++H DLKPENILL S E K IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G ST F N + T +Y APEV+ G + CD+WS G IL L +G F
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF----- 222
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
G +++R G KY + P+ + K
Sbjct: 223 ----------YGKNEYDILKRVETG--KY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 144/338 (42%), Gaps = 59/338 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----RSIRK--YRDAAMIEIDVLQHLA 120
RY+ L +GEG F V + D+ T + VAIK + RS K A+ EI +LQ L+
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
+ + + + F ++++I +VF+ + L +K N P ++ + L+
Sbjct: 71 H------PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTLQ 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ Y+H ++H DLKP N+LL + +KL + + S FGS
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS------------------FGSP 165
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
N+ + V TR YRAPE++ G + DMW+VGCIL EL +L+ L
Sbjct: 166 ---NRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
+ LG E WP+ S+ + H
Sbjct: 223 TRIFETLGTPTEE-------------------QWPDMC----SLPDYVTFKSFPGIPLHH 259
Query: 360 V-DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ A L DL+ GL ++P R+TA QAL +F N
Sbjct: 260 IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 68/351 (19%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 76 ILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + +S +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TSDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALG-PLPEHM---IRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
+F L+ L + LG P E + I +R +++ W
Sbjct: 228 PIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPW---------- 277
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+RL A S DLL +L ++P +R+ QAL HP+
Sbjct: 278 ------NRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 166 XDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNXII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 38 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 94 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 149
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 185
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 246 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 276
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 76 ILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 228 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 258
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 20 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 76 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 228 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 258
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNXII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 79 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 170
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 171 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 231 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 261
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 24 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 80 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 171
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 172 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 232 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 262
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 263 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 15 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 71 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 126
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 162
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 163 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 223 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 253
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 254 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 72 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 127
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 163
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 224 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 254
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 145/340 (42%), Gaps = 84/340 (24%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
RY I+ +G+G+FG VL+C DR TQ+ A+KV+ ++ K +D + I E+++L+ L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
+ +++ + + IV E G LFD +KR ++ D R +Q
Sbjct: 79 ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + YMH ++H DLKPENILL S E K IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G ST F N + T +Y APEV+ G + CD+WS G IL L +G F
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
+ L +E T KY + P+ + K
Sbjct: 228 YDILKRVE-----------------TGKY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 145/340 (42%), Gaps = 84/340 (24%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
RY I+ +G+G+FG VL+C DR TQ+ A+KV+ ++ K +D + I E+++L+ L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
+ +++ + + IV E G LFD +KR ++ D R +Q
Sbjct: 79 ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + YMH ++H DLKPENILL S E K IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G ST F N + T +Y APEV+ G + CD+WS G IL L +G F
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
+ L +E T KY + P+ + K
Sbjct: 228 YDILKRVE-----------------TGKY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 26 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 82 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 137
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 173
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 174 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 234 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 264
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 265 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 18 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 145/349 (41%), Gaps = 65/349 (18%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDA 108
LG T RY+ ++++G G +G V + D + VA+K VR I R+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 109 AMIE-IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
A++ ++ +H N C R D + +VFE + L +L + P
Sbjct: 63 ALLRRLEAFEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
+ +++ RQ L + ++H ++H DLKPENIL+ S
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---------------------- 156
Query: 228 KSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+KL DFG + + +V T YRAPEV+L ++ P DMWSVGCI E+
Sbjct: 157 --GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 214
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
+ LF + + L + +G PE R ++ P GA +
Sbjct: 215 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRP 261
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
V+ + V + LL +L ++P +R++A +AL H +
Sbjct: 262 VQSV----------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 148/352 (42%), Gaps = 70/352 (19%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 16 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 72 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 127
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 163
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 288 ALFQTHENLEHLAMMERALGPLPEH-----MIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
+F L+ L + LG PE +I +R +++ W
Sbjct: 224 PIFPGKHYLDQLNHILGILGS-PEQEDLNCIINLKARNYLLSLPHKNKVPW--------- 273
Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+RL A S DLL +L ++P +R+ QAL HP+
Sbjct: 274 -------NRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNHS------SIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 23 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 79 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 170
Query: 235 IDFGSTAFDNQNHS------SIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 171 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 231 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 261
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAIK + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 160/377 (42%), Gaps = 96/377 (25%)
Query: 31 GHEGATAAAAK---HVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD 87
GH T+ H +P G +V + + RYK +G+G+FG V+ C D
Sbjct: 20 GHAAGTSGGPGDHLHATP--------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKD 71
Query: 88 RQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI 143
+ T + A+KV+ R +++ D + E+ +L+ L + +++ +F+ + +
Sbjct: 72 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPNIMKLYEFFEDKGYF 125
Query: 144 CIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
+V E G LFD + R ++ VD R RQ+L + YMH +++H DLKPEN+L
Sbjct: 126 YLVGEVYTGGELFDEIISRKRFSE--VDAARII-RQVLSGITYMHKNKIVHRDLKPENLL 182
Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAP 259
L S K + I++IDFG ST F+ ++ + T +Y AP
Sbjct: 183 LESK---------------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 221
Query: 260 EVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASR 319
EV+ G + CD+WS G IL L +G F + L +E+
Sbjct: 222 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-------------- 266
Query: 320 GTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP 379
KY P+ ES K DL+ +L Y P
Sbjct: 267 ---KY-----TFELPQWKKVSESAK------------------------DLIRKMLTYVP 294
Query: 380 SERLTARQALNHPFFRN 396
S R++AR AL+H + +
Sbjct: 295 SMRISARDALDHEWIQT 311
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
VF++G PRY LS +GEG +G V +D + RVAI+ + + Y + EI
Sbjct: 22 VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L + G + ++ + + IV + + L+ LK D + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+L + Y+H ++H DLKP N+LL + + +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
DFG + +H + V+TR YRAPE++L G++ D+WSVGCIL E+ +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+F L+ L LG L G+ S+E + +
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L ++SL H ++ A S DLL +L ++P +R+ QAL HP+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 160/377 (42%), Gaps = 96/377 (25%)
Query: 31 GHEGATAAAAK---HVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD 87
GH T+ H +P G +V + + RYK +G+G+FG V+ C D
Sbjct: 19 GHAAGTSGGPGDHLHATP--------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKD 70
Query: 88 RQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI 143
+ T + A+KV+ R +++ D + E+ +L+ L + +++ +F+ + +
Sbjct: 71 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPNIMKLYEFFEDKGYF 124
Query: 144 CIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
+V E G LFD + R ++ VD R RQ+L + YMH +++H DLKPEN+L
Sbjct: 125 YLVGEVYTGGELFDEIISRKRFSE--VDAARII-RQVLSGITYMHKNKIVHRDLKPENLL 181
Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAP 259
L S K + I++IDFG ST F+ ++ + T +Y AP
Sbjct: 182 LESK---------------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 220
Query: 260 EVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASR 319
EV+ G + CD+WS G IL L +G F + L +E+
Sbjct: 221 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-------------- 265
Query: 320 GTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP 379
KY P+ ES K DL+ +L Y P
Sbjct: 266 ---KY-----TFELPQWKKVSESAK------------------------DLIRKMLTYVP 293
Query: 380 SERLTARQALNHPFFRN 396
S R++AR AL+H + +
Sbjct: 294 SMRISARDALDHEWIQT 310
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
+Y L K+GEGT+G V + E A+K +R ++ + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
S+ V++ + + + +VFE L L L C ++ V + F QLL
Sbjct: 59 ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+AY HD R++H DLKP+N+L+ +K+ + + + +P R
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
++ V T YRAP+V++G +S D+WSVGCI E+ G LF + L
Sbjct: 156 ----KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG + NWP ++ + K D N
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
S L DLL +L+ DP++R+TA+QAL H +F+ N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
T RY+ ++++G G +G V + D + VA+K VR I R+ A++ ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
+H N C R D + +VFE + L +L + P + +++
Sbjct: 63 FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
RQ L + ++H ++H DLKPENIL+ S +KL
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
DFG + + +V T YRAPEV+L ++ P DMWSVGCI E+ + LF +
Sbjct: 155 DFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
+ L + +G PE R ++ P GA + V+ +
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
V + LL +L ++P +R++A +AL H +
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
+Y L K+GEGT+G V + E A+K +R ++ + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
S+ V++ + + + +VFE L L L C ++ V + F QLL
Sbjct: 59 ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+AY HD R++H DLKP+N+L+ +K+ + + + +P R
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
++ V T YRAP+V++G +S D+WSVGCI E+ G LF + L
Sbjct: 156 ----KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG + NWP ++ + K D N
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
S L DLL +L+ DP++R+TA+QAL H +F+ N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
T RY+ ++++G G +G V + D + VA+K VR I R+ A++ ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
+H N C R D + +VFE + L +L + P + +++
Sbjct: 63 FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
RQ L + ++H ++H DLKPENIL+ S +KL
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
DFG + + +V T YRAPEV+L ++ P DMWSVGCI E+ + LF +
Sbjct: 155 DFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
+ L + +G PE R ++ P GA + V+ +
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
V + LL +L ++P +R++A +AL H +
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
T RY+ ++++G G +G V + D + VA+K VR I R+ A++ ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
+H N C R D + +VFE + L +L + P + +++
Sbjct: 63 FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
RQ L + ++H ++H DLKPENIL+ S +KL
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
DFG + + +V T YRAPEV+L ++ P DMWSVGCI E+ + LF +
Sbjct: 155 DFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
+ L + +G PE R ++ P GA + V+ +
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
V + LL +L ++P +R++A +AL H +
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 62/343 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
R + L +G G +G V +D + +++VA+K ++ + R YR E+ +L+H
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L + G + + + +V +G L + +K + V+ QL
Sbjct: 84 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD---EHVQFLVYQL 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + Y+H +IH DLKP N+ + + S ++++DFG
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDSELRILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
++ + V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF + ++
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 298 HLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
L +ME P PE + + +S Y + S P+ K + + R N +
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANPL 286
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
++ DLL +L D +R++A +AL H +F ++
Sbjct: 287 AI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
+Y L K+GEGT+G V + E A+K +R ++ + EI +L+ L
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
S+ V++ + + + +VFE L L L C ++ V + F QLL
Sbjct: 59 ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+AY HD R++H DLKP+N+L+ +K+ + + + +P R
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
++ + T YRAP+V++G +S D+WSVGCI E+ G LF + L
Sbjct: 156 ----KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ R LG + NWP ++ + K D N
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
S L DLL +L+ DP++R+TA+QAL H +F+ N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 85/351 (24%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
G +V + + RYK +G+G+FG V+ C D+ T + A+KV+ R +++ D +
Sbjct: 14 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
E+ +L+ L + +++ +F+ + + +V E G LFD + R ++
Sbjct: 74 LREVQLLKQL------DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 125
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
VD R RQ+L + YMH +++H DLKPEN+LL S
Sbjct: 126 VDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLESK---------------------S 163
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
K + I++IDFG ST F+ ++ + T +Y APEV+ G + CD+WS G IL L +
Sbjct: 164 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
G F G ++++ +G KY P+ ES K
Sbjct: 223 GCPPFN---------------GANEYDILKKVEKG--KY-----TFELPQWKKVSESAK- 259
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
DL+ +L Y PS R++AR AL+H + +
Sbjct: 260 -----------------------DLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 146/345 (42%), Gaps = 64/345 (18%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLA 120
++ PRY L +GEG +G V +D + RVAIK + + Y + EI +L
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
+ G ++ R+ + IV + + L+ LK + D + F Q+L
Sbjct: 100 HENVIGIRDILRASTLEAMRD-VYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILR 155
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ Y+H ++H DLKP N+L+ + + +K+ DFG
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINT------------------------TCDLKICDFGLA 191
Query: 241 AFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ H + V+TR YRAPE++L G++ D+WSVGCIL E+ + +F
Sbjct: 192 RIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
Query: 294 ENLEHLAMMERALG-PLPEHM---IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
L+ L + LG P E + I +R + +++ W K K
Sbjct: 252 HYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAW---------AKLFPKS 302
Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D S DLL +L ++P++R+T +AL HP+
Sbjct: 303 D--------------SKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 64/344 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
R + L +G G +G V +D + +++VA+K ++ + R YR E+ +L+H
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL-VREFGRQ 177
L + G + + + +V +G L + +K C D V+ Q
Sbjct: 84 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----CQALSDEHVQFLVYQ 139
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
LL + Y+H +IH DLKP N+ + + S ++++DF
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDSELRILDF 175
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
G ++ + V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF + +
Sbjct: 176 GLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
Query: 297 EHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
+ L +ME P PE + + +S Y + S P+ K + + R N
Sbjct: 236 DQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANP 285
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+++ DLL +L D +R++A +AL H +F ++
Sbjct: 286 LAI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 67/341 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHL-AKN 122
+Y+ L +GEG++G V++C ++ T VAIK + + AM EI +L+ L +N
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 123 DKGGSSHCVQIRNW---FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
C + + W F++ +H + +L P+ D+ +V+++ Q++
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY-----------QVVQKYLFQII 134
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ + H +IH D+KPENIL + +S +KL DFG
Sbjct: 135 NGIGFCHSHNIIHRDIKPENIL------------------------VSQSGVVKLCDFGF 170
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
+ A + + V+TR YRAPE+++G + + D+W++GC++ E+ GE LF +
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 296 LEHLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
++ L + LG L P H ++ F + V IK + L+R
Sbjct: 231 IDQLYHIMMCLGNLIPRH---------QELFNKNPVF----AGVRLPEIKEREPLER--- 274
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
+ + DL L DP +R + L+H FF+
Sbjct: 275 ----RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 110
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 169
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 170 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 206
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 207 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 267 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 319
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 320 ---------------LLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 114
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 173
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 174 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 210
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 211 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 270
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 271 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 323
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 324 ---------------LLEYTPTARLTPLEACAHSFFDELRD 349
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 154/354 (43%), Gaps = 85/354 (24%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
G +V + + RYK +G+G+FG V+ C D+ T + A+KV+ R +++ D +
Sbjct: 20 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 79
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
E+ +L+ L + +++ +F+ + + +V E G LFD + R ++
Sbjct: 80 LREVQLLKQL------DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 131
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
VD R RQ+L + YMH +++H DLKPEN+LL S
Sbjct: 132 VDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLESK---------------------S 169
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
K + I++IDFG ST F+ ++ + T +Y APEV+ G + CD+WS G IL L +
Sbjct: 170 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 228
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
G F + L +E+ KY P+ ES K
Sbjct: 229 GCPPFNGANEYDILKKVEKG-----------------KY-----TFELPQWKKVSESAK- 265
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
DL+ +L Y PS R++AR AL+H + + +
Sbjct: 266 -----------------------DLIRKMLTYVPSMRISARDALDHEWIQTYTK 296
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 81
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 140
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 141 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 177
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 178 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 237
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 238 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 290
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 291 ---------------LLEYTPTARLTPLEACAHSFFDELRD 316
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 155
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 214
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 215 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 251
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 252 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 311
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 312 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 364
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 365 ---------------LLEYTPTARLTPLEACAHSFFDELRD 390
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 104
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 163
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 164 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 200
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 201 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 260
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 261 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 313
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 314 ---------------LLEYTPTARLTPLEACAHSFFDELRD 339
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 110
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 169
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 170 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 206
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 267 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 319
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 320 ---------------LLEYTPTARLTPLEACAHSFFDELRD 345
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 112
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 171
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 172 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 208
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 209 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 268
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 269 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 321
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 322 ---------------LLEYTPTARLTPLEACAHSFFDELRD 347
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 88
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 148 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 184
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 297
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 298 ---------------LLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 88
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 148 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 184
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 297
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 298 ---------------LLEYTPTARLTPLEACAHSFFDELRD 323
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 84
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 143
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 144 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 180
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 181 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 240
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 241 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 293
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 294 ---------------LLEYTPTARLTPLEACAHSFFDELRD 319
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 89
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 148
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 149 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 185
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 186 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 245
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 246 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 298
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 299 ---------------LLEYTPTARLTPLEACAHSFFDELRD 324
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 95
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 154
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 155 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 191
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 192 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 251
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 252 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 304
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 305 ---------------LLEYTPTARLTPLEACAHSFFDELRD 330
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 77
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 136
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 137 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 173
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 174 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 233
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 234 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 286
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 287 ---------------LLEYTPTARLTPLEACAHSFFDELRD 312
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 80
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 139
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 140 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 176
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 177 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 236
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 237 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 289
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 290 ---------------LLEYTPTARLTPLEACAHSFFDELRD 315
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V +++++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 48/332 (14%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
RY+ ++K+GEGT+G V + D T E VAIK +R A+ E+ +L+ L +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+++++ + + + ++FE L ++ +N V ++ F QL+ V
Sbjct: 95 ------IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRV--IKSFLYQLINGVN 146
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
+ H R +H DLKP+N+LL S+ + P K G L ++ I + F
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG------LARAFGIPIRQF------ 194
Query: 244 NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
H I T YR PE++LG +S D+WS+ CI E+ LF ++ L +
Sbjct: 195 --THEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
LG LP+ WP G + K R K + +
Sbjct: 251 FEVLG-LPDDT------------------TWP-GVTALPDWKQSFPKFRGKTLKRVLGAL 290
Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DLL +L DP +R++A+ AL HP+F
Sbjct: 291 LDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
N++ +++ S +GEG +G V + T E VAIK + K + + EI +L+H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K++ + +Q + F+ N + I+ E + L + D ++ F Q L
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+V +H +IH DLKP N+L+ S+ +K+ + + R + +S+A D
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ V+TR YRAPEV+L +S D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
++ +G + L E +RE IK++ L+ M
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
R DLL +L +DP++R+TA++AL HP+ + ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V + +++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
N++ +++ S +GEG +G V + T E VAIK + K + + EI +L+H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K++ + +Q + F+ N + I+ E + L + D ++ F Q L
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+V +H +IH DLKP N+L+ S+ +K+ + + R + +S+A D
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ V+TR YRAPEV+L +S D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
++ +G + L E +RE IK++ L+ M
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
R DLL +L +DP++R+TA++AL HP+ + ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V + +++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 64/344 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
R + L +G G +G V +D + +++VA+K ++ + R YR E+ +L+H
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL-VREFGRQ 177
L + G + + + +V +G L + +K C D V+ Q
Sbjct: 76 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----CQALSDEHVQFLVYQ 131
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
LL + Y+H +IH DLKP N+ + + ++++DF
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDCELRILDF 167
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
G ++ + V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF + +
Sbjct: 168 GLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 227
Query: 297 EHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
+ L +ME P PE + + +S Y + S P+ K + + R N
Sbjct: 228 DQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANP 277
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+++ DLL +L D +R++A +AL H +F ++
Sbjct: 278 LAI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 311
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 153/342 (44%), Gaps = 40/342 (11%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
N++ +++ S +GEG +G V + T E VAIK + K + + EI +L+H
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
K++ + +Q + F+ N + I+ E + L + D ++ F Q L
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+V +H +IH DLKP N+L+ S+ +K+ + + R + +S+A D
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
V+TR YRAPEV+L +S D+WS GCIL EL +F + L
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
++ +G + L E +RE IK++ L+ M
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
R DLL +L +DP++R+TA++AL HP+ + ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G+FG V + + E VAIK V + +++ E+ +++ L HC +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
R +F Y + ++ +V + + +++ + R K PV V+ + QL S+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
AY+H + H D+KP+N+LL P ++ +KL DFGS
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ + S + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + LG IR + TE F + W + R +A+ R
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
LL Y P+ RLT +A H FF L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 53/333 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y+++ K+G G + V E + E+V +K+++ ++K + EI +L++L +GG
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL----RGGP 92
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ D + +VFE + + F L Y +R + ++L+++ Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DN 244
+ ++H D+KP N++ + E KL +LID+G F
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL----------------------RLIDWGLAEFYHPG 185
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
Q ++ V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 303 ERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ LG +KY R N G SR K+ +R + + H+
Sbjct: 246 AKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR------KRWERFVHSENQHL- 292
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D L LLRYD RLTAR+A+ HP+F
Sbjct: 293 -VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ V+ H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+ +K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 85/351 (24%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
G +V + + RYK +G+G+FG V+ C D+ T + A+KV+ R +++ D +
Sbjct: 14 GXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
E+ +L+ L + ++ +F+ + + +V E G LFD + R ++
Sbjct: 74 LREVQLLKQL------DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 125
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
VD R RQ+L + Y H +++H DLKPEN+LL S
Sbjct: 126 VDAARII-RQVLSGITYXHKNKIVHRDLKPENLLLESK---------------------S 163
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
K + I++IDFG ST F+ ++ + T +Y APEV+ G + CD+WS G IL L +
Sbjct: 164 KDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
G F + L +E+ KY P+ ES K
Sbjct: 223 GCPPFNGANEYDILKKVEKG-----------------KY-----TFELPQWKKVSESAK- 259
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
DL+ L Y PS R++AR AL+H + +
Sbjct: 260 -----------------------DLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ V+ H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+ +K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 62/351 (17%)
Query: 58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA---MIEID 114
F++ ++ Y+I+ +G G +G V R T ++VAIK + + A + E+
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L+H ++ ++ + + +V + + L + ++ P ++ VR F
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYF 164
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
QLL + YMH ++IH DLKP N+L+ ++ +K+
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVN------------------------ENCELKI 200
Query: 235 IDFG-------STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
DFG S A + V+TR YRAPE++L L ++ D+WSVGCI E+
Sbjct: 201 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
LF + L ++ LG +I+ AV E ++A
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQ---------------------AVGAERVRAY 299
Query: 347 KKLDRLKNMV---SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + V +++ R L+ LL +LR++PS R++A AL HPF
Sbjct: 300 IQSLPPRQPVPWETVYPGADRQALS-LLGRMLRFEPSARISAAAALRHPFL 349
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 85/340 (25%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQH 118
L+ RY+ + K+G G +G VL C D+ T AIK+++ + A + E+ VL+
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 119 LAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPVDLVREFGR 176
L + +++ +F D RN+ ++ G LFD + R K+ ++ +
Sbjct: 61 L------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---K 111
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L Y+H ++H DLKPEN+LL S + + IK++D
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESK---------------------SRDALIKIVD 150
Query: 237 FGSTA-FD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG +A F+ + T +Y APEV L + CD+WS G IL L G F
Sbjct: 151 FGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG--- 206
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
G + +++R +G + +W + + D K
Sbjct: 207 ------------GQTDQEILKRVEKGKFSF----DPPDWTQVS------------DEAKQ 238
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+V L +L Y+PS+R++A +ALNHP+
Sbjct: 239 LVKL---------------MLTYEPSKRISAEEALNHPWI 263
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V+ +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ V+ H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+ +K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVG I+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 62/351 (17%)
Query: 58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA---MIEID 114
F++ ++ Y+I+ +G G +G V R T ++VAIK + + A + E+
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
+L+H ++ ++ + + +V + + L + ++ P ++ VR F
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYF 163
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
QLL + YMH ++IH DLKP N+L + ++ +K+
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLL------------------------VNENCELKI 199
Query: 235 IDFG-------STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
DFG S A + V+TR YRAPE++L L ++ D+WSVGCI E+
Sbjct: 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
LF + L ++ LG +I+ AV E ++A
Sbjct: 260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQ---------------------AVGAERVRAY 298
Query: 347 KKLDRLKNMV---SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ + V +++ R L+ LL +LR++PS R++A AL HPF
Sbjct: 299 IQSLPPRQPVPWETVYPGADRQALS-LLGRMLRFEPSARISAAAALRHPFL 348
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 85/341 (24%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQ 117
+ L+ RY+ + K+G G +G VL C D+ T AIK+++ + A + E+ VL+
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 118 HLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPVDLVREFG 175
L + +++ +F D RN+ ++ G LFD + R K+ ++
Sbjct: 77 QL------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM--- 127
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+Q+L Y+H ++H DLKPEN+LL S + + IK++
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESK---------------------SRDALIKIV 166
Query: 236 DFGSTA-FD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
DFG +A F+ + T +Y APEV L + CD+WS G IL L G F
Sbjct: 167 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG-- 223
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
G + +++R +G + +W + + D K
Sbjct: 224 -------------GQTDQEILKRVEKGKFSF----DPPDWTQVS------------DEAK 254
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+V L +L Y+PS+R++A +ALNHP+
Sbjct: 255 QLVKL---------------MLTYEPSKRISAEEALNHPWI 280
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG+F +C +++ + A+K++ ++ EI L+ G + V++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCE-----GHPNIVKL 71
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
F + H +V E L G LF+ +K+ K+ F R+L+ +V++MHD+ ++H
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHSS 249
DLKPEN+L + IK+IDFG DNQ +
Sbjct: 130 RDLKPENLLFTDEN---------------------DNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
T HY APE++ G+ CD+WS+G IL + +G+ FQ+H+
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA N + V TR+YRAPEVILG+G++ D+WSVGCI+ EL G +FQ +
Sbjct: 170 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+++ + LG P E M +R KY +P+ ES +
Sbjct: 230 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESER--- 286
Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D++K S DLL +L DP +R++ +AL HP+
Sbjct: 287 --DKIKT----------SQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+ +K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ V+ H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+ +K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVG I+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 6 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 62
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 63 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 117
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 118 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 163
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 164 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 262
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 263 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 313 VDEALQHPYI 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 73/369 (19%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA 385
N P+ A S E + D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGYSFEKLFP----DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 386 RQALNHPFF 394
+AL HP+
Sbjct: 313 DEALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 7 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 63
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 64 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 118
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 119 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 164
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + V TR+YRAPEVILG+G+
Sbjct: 165 --------------------CTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 263
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 264 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 313
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 314 VDEALQHPYI 323
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
+AL HP+
Sbjct: 312 VDEALQHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L+K+G+GTFG V + R+T ++VA+K V + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
+ + + + I +VF+ L L N F + ++ + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
+ Y+H +++H D+K N+L+ + +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
S A ++Q + + V T YR PE++LG + P D+W GCI+ E+ T + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
LA++ + G + + WP + ++ + +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
DR ++ + DL+ LL DP++R+ + ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 167
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA N + V TR+YRAPEVILG+G+ D+WSVGCI+ EL G +FQ +
Sbjct: 168 FGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
+++ + LG P E M +R Y +P+ ES +
Sbjct: 228 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESER--- 284
Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D++K S DLL +L DP +R++ +AL HP+
Sbjct: 285 --DKIKT----------SQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L+K+G+GTFG V + R+T ++VA+K V + A+ EI +LQ L +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
+ + + + I +VF+ L L N F + ++ + LL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 136
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
+ Y+H +++H D+K N+L+ + +KL DFG
Sbjct: 137 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 172
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
S A ++Q + + V T YR PE++LG + P D+W GCI+ E+ T + Q +
Sbjct: 173 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
LA++ + G + + WP + ++ + +KL+ +K
Sbjct: 233 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 269
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
DR ++ + DL+ LL DP++R+ + ALNH FF
Sbjct: 270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L+K+G+GTFG V + R+T ++VA+K V + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
+ + + + I +VF+ L L N F + ++ + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
+ Y+H +++H D+K N+L+ + +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
S A ++Q + + V T YR PE++LG + P D+W GCI+ E+ T + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
LA++ + G + + WP + ++ + +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
DR ++ + DL+ LL DP++R+ + ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 73/369 (19%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 5 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 62 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
++ R Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
+K++DFG TA + + V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
D+WSVGCI+ E+ G LF ++++ + LG P PE M ++ Y
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA 385
N P+ A S E + D L S H S DLL +L D S+R++
Sbjct: 262 -----NRPKYAGYSFEKLFP----DVLFPADSEHNALKASQARDLLSKMLVIDASKRISV 312
Query: 386 RQALNHPFF 394
+AL HP+
Sbjct: 313 DEALQHPYI 321
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
+Y+ L+K+G+GTFG V + R+T ++VA+K V + A+ EI +LQ L +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
+ + + + I +VF+ L L N F + ++ + LL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
+ Y+H +++H D+K N+L+ + +KL DFG
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
S A ++Q + + V T YR PE++LG + P D+W GCI+ E+ T + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
LA++ + G + + WP + ++ + +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
DR ++ + DL+ LL DP++R+ + ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 61/363 (16%)
Query: 47 RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
+RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 10 KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 66
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
+ R YR+ +++ + H KN G + ++ ++++ + IV E + +L
Sbjct: 67 QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 121
Query: 156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR 215
++ + + Q+L + ++H +IH DLKP NI++ S
Sbjct: 122 QVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---------- 167
Query: 216 SSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDM 273
+K++DFG TA + + V TR+YRAPEVILG+G+ D+
Sbjct: 168 --------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLN 332
WSVGCI+ E+ + LF + ++ + LG P PE M ++ Y N
Sbjct: 214 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-----N 267
Query: 333 WPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
P+ A S E + D L S H S DLL +L D S+R++ +AL H
Sbjct: 268 RPKYAGYSFEKLFP----DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 392 PFF 394
P+
Sbjct: 324 PYI 326
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 150/340 (44%), Gaps = 55/340 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
RY+ L +G G G V +D + VAIK + + R YR+ +++ + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK--CVNH 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
KN G + ++ ++++ + IV E + +L ++ + + Q+
Sbjct: 77 --KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQME----LDHERMSYLLYQM 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L + ++H +IH DLKP NI++ S +K++DFG
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILDFG 165
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + +
Sbjct: 166 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 297 EHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGA-VSRESIKAVKKLDRLKN 354
+ + LG P PE M ++ Y N P+ A S E + D L
Sbjct: 226 DQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-----NRPKYAGYSFEKLFP----DVLFP 275
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S H S DLL +L D S+R++ +AL HP+
Sbjct: 276 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 20 SEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSK---MGE 76
S A+ + V + +A A +PP D H + + + +SK +G
Sbjct: 44 SNADLTERMPVKSKRTSALAVDIPAPPAPFD----HRIVTAKQGAVNSFYTVSKTEILGG 99
Query: 77 GTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIR 134
G FG+V +C + T ++A K++++ R +D + EI V+ L ++ +Q+
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKT-RGMKDKEEVKNEISVMNQL------DHANLIQLY 152
Query: 135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHT 193
+ F+ +N I +V E + G LFD + Y +D + F +Q+ E + +MH + ++H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHL 211
Query: 194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI-V 251
DLKPENIL V+ + + IK+IDFG + + + +
Sbjct: 212 DLKPENILCVNRD----------------------AKQIKIIDFGLARRYKPREKLKVNF 249
Query: 252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
T + APEV+ S+P DMWSVG I L +G + F + E L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 65/373 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEID-VLQHLAKNDKG 125
RY+I +G G++G V E +D+ + VAIK + +R + D +I+ +L+ +A ++
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI--LRVFED--LIDCKRILREIAILNRL 109
Query: 126 GSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL----VREFGR 176
H V++ + + + + +V E + S F L R PV L ++
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRT-----PVYLTELHIKTLLY 163
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------PGYKRSSSGEMPFRCLPK 228
LL V Y+H ++H DLKP N L+ +K+ Y + + ++P P+
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS--PR 221
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGE 287
+ L+ F T + + V TR YRAPE+IL ++ D+WS+GCI EL
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL---- 277
Query: 288 ALFQTHENLEHLAMMERALGPL-------PEHMIRRASRGTEKYFRRGSR--LNWP---E 335
L EN+ + A GPL P ++A K+ RG+R LN
Sbjct: 278 -LNMIKENVAYHA----DRGPLFPGSSCFPLSPDQKAGNDF-KFHTRGNRDQLNVIFNIL 331
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD-----------LLHGLLRYDPSERLT 384
G S E I+A++K D K + + R + L + LL +L ++P++R+T
Sbjct: 332 GTPSEEDIEALEKED-AKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRIT 390
Query: 385 ARQALNHPFFRNL 397
+ L HPFF+ +
Sbjct: 391 INECLAHPFFKEV 403
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
RY+ L +G G G V +D VAIK + R + A A E+ +++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK------RNKYCPFPVDLVREFGRQ 177
+ + + + +V E + +L ++ R Y + Q
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY----------Q 134
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+L + ++H +IH DLKP NI++ S +K++DF
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILDF 170
Query: 238 G--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 296 LEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
++ + LG P PE M +R KY + L +P K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP-------------K 273
Query: 349 L--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L D L S H S DLL +L DP++R++ AL HP+
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 143/365 (39%), Gaps = 105/365 (28%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
RY+ L +G G G V +D VAIK + + R YR+ +++
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 78
Query: 119 LAKNDKGGSSHCVQIRNWFDYRN------------HICIVFEKLGPSLFDFLK------R 160
CV +N N + +V E + +L ++ R
Sbjct: 79 -----------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 128 MSYLLY----------QMLXGIKHLHSAGIIHRDLKPSNIVVKSD--------------- 162
Query: 221 MPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC 278
+K++DFG TA + + V TR+YRAPEVILG+G+ D+WSVGC
Sbjct: 163 ---------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 279 ILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRL 331
I+ E+ + LF + ++ + LG P PE M +R KY + L
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGL 269
Query: 332 NWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
+P KL D L S H S DLL +L DP++R++ AL
Sbjct: 270 TFP-------------KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 390 NHPFF 394
HP+
Sbjct: 317 QHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 143/365 (39%), Gaps = 105/365 (28%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
RY+ L +G G G V +D VAIK + + R YR+ +++
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRN------------HICIVFEKLGPSLFDFLK------R 160
CV +N N + +V E + +L ++ R
Sbjct: 72 -----------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 120
Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
Y + Q+L + ++H +IH DLKP NI++ S
Sbjct: 121 MSYLLY----------QMLXGIKHLHSAGIIHRDLKPSNIVVKSD--------------- 155
Query: 221 MPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC 278
+K++DFG TA + + V TR+YRAPEVILG+G+ D+WSVGC
Sbjct: 156 ---------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 279 ILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRL 331
I+ E+ + LF + ++ + LG P PE M +R KY + L
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGL 262
Query: 332 NWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
+P KL D L S H S DLL +L DP++R++ AL
Sbjct: 263 TFP-------------KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 390 NHPFF 394
HP+
Sbjct: 310 QHPYI 314
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 63/368 (17%)
Query: 43 VSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
+S +RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 1 MSRSKRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 57
Query: 100 --------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
+ R YR+ +++ + H KN G + ++ ++++ + IV E +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMD 112
Query: 152 PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP 211
+L ++ + + Q+L + ++H +IH DLKP NI++ S
Sbjct: 113 ANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD------ 162
Query: 212 GYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSY 269
+K++DFG TA + V TR+YRAPEVILG+G+
Sbjct: 163 ------------------CTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 270 PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRG 328
D+WSVGCI+ E+ + LF + ++ + LG P PE M ++ Y
Sbjct: 205 NVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-- 261
Query: 329 SRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 ---NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 387 QALNHPFF 394
+AL HP+
Sbjct: 314 EALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 155/389 (39%), Gaps = 97/389 (24%)
Query: 40 AKHVSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
AKH + + D + Y +G++ + RY+ L +G G G V +D VAI
Sbjct: 34 AKHYNMSKSKVDNQ-FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI 92
Query: 97 KVV--------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN------- 141
K + + R YR+ +++ CV +N N
Sbjct: 93 KKLSRPFQNQTHAKRAYRELVLMK-----------------CVNHKNIISLLNVFTPQKT 135
Query: 142 -----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
+ +V E + +L ++ + + Q+L + ++H +IH DLK
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTR 254
P NI++ S +K++DFG TA + + V TR
Sbjct: 192 PSNIVVKSD------------------------CTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 255 HYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM 313
+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++ + LG P PE M
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 314 ------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARS 365
+R KY + L +P KL D L S H S
Sbjct: 288 KKLQPTVRNYVENRPKY----AGLTFP-------------KLFPDSLFPADSEHNKLKAS 330
Query: 366 TLTDLLHGLLRYDPSERLTARQALNHPFF 394
DLL +L DP++R++ AL HP+
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 155/389 (39%), Gaps = 97/389 (24%)
Query: 40 AKHVSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
AKH + + D + Y +G++ + RY+ L +G G G V +D VAI
Sbjct: 34 AKHYNMSKSKVDNQ-FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI 92
Query: 97 KVV--------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN------- 141
K + + R YR+ +++ CV +N N
Sbjct: 93 KKLSRPFQNQTHAKRAYRELVLMK-----------------CVNHKNIISLLNVFTPQKT 135
Query: 142 -----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
+ +V E + +L ++ + + Q+L + ++H +IH DLK
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTR 254
P NI++ S +K++DFG TA + + V TR
Sbjct: 192 PSNIVVKSD------------------------CTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 255 HYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM 313
+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++ + LG P PE M
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 314 ------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARS 365
+R KY + L +P KL D L S H S
Sbjct: 288 KKLQPTVRNYVENRPKY----AGLTFP-------------KLFPDSLFPADSEHNKLKAS 330
Query: 366 TLTDLLHGLLRYDPSERLTARQALNHPFF 394
DLL +L DP++R++ AL HP+
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 170
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 231 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 273
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 163
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 164 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 266
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 170
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 231 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 273
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 163
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 164 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 266
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 168
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 169 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 228
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 229 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 271
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 272 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
RY+ L +G G G V +D VAIK + R + A A E+ +++ + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK------RNKYCPFPVDLVREFGRQ 177
+ + + + +V E + +L ++ R Y + Q
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY----------Q 134
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+L + ++H +IH DLKP NI++ S +K++DF
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILDF 170
Query: 238 G--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 296 LEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
++ + LG P PE M +R KY + L +P K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP-------------K 273
Query: 349 L--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L D L S H S DLL +L DP++R++ AL HP+
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+L + ++H +IH DLKP NI++ S +K++D
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 162
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
FG TA + + V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF +
Sbjct: 163 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
++ + LG P PE M +R KY + L +P
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 265
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
KL D L S H S DLL +L DP++R++ AL HP+
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
Y++ +G+G F V C +R+T ++ A+K+V + K+ + + + L+ H+ K
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
+ H V++ + + +VFE + G L F+ +KR + + + + RQ+
Sbjct: 85 H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
LE++ Y HD +IH D+KPEN+LL S E S+ +KL DFG
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKE---------------------NSAPVKLGDFG 178
Query: 239 STAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
++ V T H+ APEV+ + P D+W G IL L +G + T E
Sbjct: 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
L E + ++N + + ES K
Sbjct: 239 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 264
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L DP+ER+T +ALNHP+ +
Sbjct: 265 --------------DLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 78/329 (23%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G G+VLEC+ R+T ++ A+K++ K R E+D H + G H V I
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD--HHWQAS---GGPHIVCI 68
Query: 134 RNWFDYRNH----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
+ ++ +H + I+ E + G LF ++ F E R + ++ ++H
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
+ H D+KPEN+L S E K + +KL DFG QN
Sbjct: 129 NIAHRDVKPENLLYTSKE---------------------KDAVLKLTDFGFAKETTQNAL 167
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
+ T +Y APEV+ + CDMWS+G I+ L G F ++ +A+
Sbjct: 168 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAIS 219
Query: 308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
P + IR G PE + E K + +L
Sbjct: 220 PGMKRRIRLGQYGFPN----------PEWSEVSEDAKQLIRL------------------ 251
Query: 368 TDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL+ DP+ERLT Q +NHP+
Sbjct: 252 ------LLKTDPTERLTITQFMNHPWINQ 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 63/368 (17%)
Query: 43 VSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
+S +RD++ Y +G++ + RY+ L +G G G V +D + VAIK +
Sbjct: 1 MSRSKRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 57
Query: 100 --------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
+ R YR+ +++ + H KN G + ++ ++++ + IV E +
Sbjct: 58 SRPFQNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMD 112
Query: 152 PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP 211
+L ++ + + Q+L + ++H +IH DLKP NI++ S
Sbjct: 113 ANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD------ 162
Query: 212 GYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSY 269
+K++DFG TA + V TR+YRAPEVILG+G+
Sbjct: 163 ------------------CTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 270 PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRG 328
D+WSVGCI+ E+ + LF + ++ + LG P P M ++ Y
Sbjct: 205 NVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM-KKLQPTVRNYVE-- 261
Query: 329 SRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
N P+ A + +KL D L S H S DLL +L D S+R++
Sbjct: 262 ---NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 387 QALNHPFF 394
+AL HP+
Sbjct: 314 EALQHPYI 321
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 78/329 (23%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G G+VLEC+ R+T ++ A+K++ K R E+D H + G H V I
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD--HHWQAS---GGPHIVCI 87
Query: 134 RNWFDYRNH----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
+ ++ +H + I+ E + G LF ++ F E R + ++ ++H
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
+ H D+KPEN+L S E K + +KL DFG QN
Sbjct: 148 NIAHRDVKPENLLYTSKE---------------------KDAVLKLTDFGFAKETTQNAL 186
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
+ T +Y APEV+ + CDMWS+G I+ L G F ++ +A+
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAIS 238
Query: 308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
P + IR G PE + E K + +L
Sbjct: 239 PGMKRRIRLGQYGFPN----------PEWSEVSEDAKQLIRL------------------ 270
Query: 368 TDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL+ DP+ERLT Q +NHP+
Sbjct: 271 ------LLKTDPTERLTITQFMNHPWINQ 293
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 119
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 217
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 218 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 275
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 276 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 306
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 307 ------------LIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 113
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 211
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 269
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 270 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 301 ------------LIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 167
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 225
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 226 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 256
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 257 ------------LIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 83
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 84 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 181
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 182 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 239
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 240 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 270
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 271 ------------LIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 67
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 165
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 166 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 223
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 224 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 254
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 255 ------------LIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 68
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 69 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 166
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 167 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 224
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 225 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 255
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 256 ------------LIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 74
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 75 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 172
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 173 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 230
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 231 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 261
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 262 ------------LIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 75
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 173
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 174 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 231
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 232 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 262
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 263 ------------LIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 167
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 225
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 226 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 256
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 257 ------------LIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 73
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 74 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 171
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 172 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 229
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 230 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 260
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 261 ------------LIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 67
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 165
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ T +Y APEV+ + CDMWS+G I+ L G F ++ L
Sbjct: 166 KETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 223
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 224 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 254
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 255 ------------LIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 146/356 (41%), Gaps = 74/356 (20%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHL 119
G +L RY L +G G G V D +RVAIK +V + + A+ EI +++ L
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 120 AKND---------KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL 170
++ GS + + + N + IV E + L + L++ P +
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTEL-NSVYIVQEYMETDLANVLEQG---PLLEEH 121
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
R F QLL + Y+H ++H DLKP N+ + + + +
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV---------------------- 159
Query: 231 AIKLIDFG-----STAFDNQNH-SSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVEL 283
+K+ DFG + ++ H S + T+ YR+P ++L ++ DMW+ GCI E+
Sbjct: 160 -LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSR-----LNWPEGAV 338
TG+ LF LE + ++ ++ + E + Y R L +
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI 278
Query: 339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
SRE++ D L +L + P +RLTA +AL+HP+
Sbjct: 279 SREAV-------------------------DFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAIK++ S RK+ D A+ EI++L+
Sbjct: 19 IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 78 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 168
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 169 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 229 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 263
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 264 ----------------------LLVVDPKARFTTEEALRHPWLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAIK++ S RK+ D A+ EI++L+
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 72 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAIK++ S RK+ D A+ EI++L+
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 72 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAIK++ S RK+ D A+ EI++L+
Sbjct: 12 IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 70
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 71 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 161
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 162 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 222 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 256
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 257 ----------------------LLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAIK++ S RK+ D A+ EI++L+
Sbjct: 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 72 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 66 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 157
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 158 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 66 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 157
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 158 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQH------PNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQH------PNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
+ L+ +++ S++G G V C + TQ+ A+KV ++K D ++ EI VL L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKV---LKKTVDKKIVRTEIGVLLRL 105
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + ++++ F+ I +V E + G LFD + Y + + +Q+
Sbjct: 106 SH------PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
LE+VAY+H+ ++H DLKPEN+L + + +K+ DFG
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPA---------------------PDAPLKIADFG 196
Query: 239 -STAFDNQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI-LVELCTGEALFQTHEN 295
S ++Q ++ T Y APE++ G + DMWSVG I + LC E +
Sbjct: 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD---- 252
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
RG + FRR +
Sbjct: 253 ----------------------ERGDQFMFRRILNCEY--------------------YF 270
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
+S D DL+ L+ DP +RLT QAL HP+
Sbjct: 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 138/359 (38%), Gaps = 97/359 (27%)
Query: 55 HYVFNLGENLTPR------------YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--- 99
+YVF++ + P+ Y I ++G G FG V +R T A K V
Sbjct: 28 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 100 -RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
S ++ + + VL+H V + + F+ N + +++E + G LF+
Sbjct: 88 HESDKETVRKEIQTMSVLRHPT---------LVNLHDAFEDDNEMVMIYEFMSGGELFEK 138
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
+ +++ D E+ RQ+ + + +MH+ +H DLKPENI+ +
Sbjct: 139 VA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK------------ 185
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWS 275
+S+ +KLIDFG TA + S V+ T + APEV G Y DMWS
Sbjct: 186 ----------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 235
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
VG + L +G + F
Sbjct: 236 VGVLSYILLSGLSPFG-------------------------------------------- 251
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
G E+++ VK D NM D + LL DP+ R+T QAL HP+
Sbjct: 252 GENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 139/363 (38%), Gaps = 97/363 (26%)
Query: 55 HYVFNLGENLTPR------------YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--- 99
+YVF++ + P+ Y I ++G G FG V +R T A K V
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 100 -RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
S ++ + + VL+H V + + F+ N + +++E + G LF+
Sbjct: 194 HESDKETVRKEIQTMSVLRHPT---------LVNLHDAFEDDNEMVMIYEFMSGGELFEK 244
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
+ +++ D E+ RQ+ + + +MH+ +H DLKPENI+ +
Sbjct: 245 VA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK------------ 291
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWS 275
+S+ +KLIDFG TA + S V+ T + APEV G Y DMWS
Sbjct: 292 ----------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
VG + L +G + F
Sbjct: 342 VGVLSYILLSGLSPFG-------------------------------------------- 357
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
G E+++ VK D NM D + LL DP+ R+T QAL HP+
Sbjct: 358 GENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
Query: 396 NLN 398
N
Sbjct: 416 PGN 418
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
EN+ Y ++G G F V +C ++ T + A K ++ R R+ E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + ++ + + ++ E + G LFDFL + + E
Sbjct: 67 ILKEIQ------HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L V Y+H L++ H DLKPENI+L+ R +PK IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+IDFG F N+ +I T + APE++ DMWS+G I L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E LA + + S + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N+L + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVL-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 136/361 (37%), Gaps = 100/361 (27%)
Query: 55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRK 104
H EN P+ +G G V C + T + A+K++ +++
Sbjct: 10 HSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 105 YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKY 163
R+A + E+D+L+ ++ G + +Q+++ ++ +VF+ + LFD+L
Sbjct: 66 LREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-- 118
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
R+ R LLE + +H L ++H DLKPENIL
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL---------------------- 156
Query: 224 RCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWS 275
L IKL DFG S D + S+ T Y APE+I G+ DMWS
Sbjct: 157 --LDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
G I+ L G F + + M+R G ++ GS PE
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PE 252
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
D T+ DL+ L P +R TA +AL HPFF+
Sbjct: 253 W------------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 396 N 396
Sbjct: 289 Q 289
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 40/253 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A KVV ++ ++ M EI + + L + H
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R F RQ ++ V Y+H+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +M +K+ DFG FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
++ T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E +++
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
+P H+ AS
Sbjct: 258 EYSVPRHINPVAS 270
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC-TG 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 169
Query: 231 AIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F + Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 170 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 276
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 277 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F + Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 170
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 171 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 277
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 278 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 170
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 171 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 277
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 278 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 176
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 177 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 234
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 235 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 283
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 284 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++L+++ Y H + ++H D+KP N++ + E KL
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
+LID+G F Q ++ V++R+++ PE+++ + Y DMWS+GC+L +
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
E F H+N + L + + LG +KY R N G SR
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
K+ +R + + H+ D L LLRYD RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 63 NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
+L P ++I+ ++G+G FG+V + +++T A KV+ +S + D M+EID+L
Sbjct: 32 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + F Y N++ I+ E D + P ++ +Q
Sbjct: 91 C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L+++ Y+HD ++IH DLK NIL L G IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
+A + Q S + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 181 VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 38/276 (13%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEID 114
E++ Y++ ++G G F V +C + T + A K ++ R R+ E++
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
+L+ + + + + + F+ + + ++ E + G LFDFL + D +
Sbjct: 68 ILREIR------HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQ 119
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q+L+ V Y+H R+ H DLKPENI+L+ + +P + IK
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIK 159
Query: 234 LIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
LIDFG + + N +I T + APE++ DMWS+G I L +G + F
Sbjct: 160 LIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
E L + E S + + RR
Sbjct: 220 GETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A KVV ++ ++ M EI + + L + H
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R F RQ ++ V Y+H+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +M +K+ DFG FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E +++
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
+P H+ AS
Sbjct: 258 EYSVPRHINPVAS 270
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 128 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 174 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 210
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 265
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 266 -----TDGLNAYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 315
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 316 LDKLLRYDHQERLTALEAMTHPYFQQV 342
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 63 NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
+L P ++I+ ++G+G FG+V + +++T A KV+ +S + D M+EID+L
Sbjct: 32 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + F Y N++ I+ E D + P ++ +Q
Sbjct: 91 C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L+++ Y+HD ++IH DLK NIL L G IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
+A + Q S + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 181 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAI+++ S RK+ D A+ EI++L+
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKK 196
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 197 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 248
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 287
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 288 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
R + G PE VS +++ VKK
Sbjct: 348 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 382
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 383 ----------------------LLVVDPKARFTTEEALRHPWLQD 405
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 95/345 (27%)
Query: 70 ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
I+SK +G G G V ++R+T ++VAI+++ S RK+ D A+ EI++L+
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKK 210
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
L ++I+N+FD ++ ++ G LFD + NK + + Q+
Sbjct: 211 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 262
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L +V Y+H+ +IH DLKPEN+LL S E + IK+ DFG
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 301
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
+ + ++ T Y APEV++ + G++ D WS+G IL +G F H
Sbjct: 302 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Query: 294 ENLEHL--AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
L + +PE W E VS +++ VKK
Sbjct: 362 RTQVSLKDQITSGKYNFIPEV--------------------WAE--VSEKALDLVKK--- 396
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL DP R T +AL HP+ ++
Sbjct: 397 ----------------------LLVVDPKARFTTEEALRHPWLQD 419
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 154 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 190
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 245
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 246 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 295
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A KVV ++ ++ M EI + + L + H
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R F RQ ++ V Y+H+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +M +K+ DFG FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E +++
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
+P H+ AS
Sbjct: 258 EYSVPRHINPVAS 270
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
+G+G F + E D T+E A KVV + K + ++ H + ++ H V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN----PHVV 89
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
+F+ + + +V E SL + KR K P R F RQ ++ V Y+H+ R+
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRV 147
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQNH 247
IH DLK N+ L + +M +K+ DFG FD +
Sbjct: 148 IHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGERK 183
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
+ T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E +++
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
Query: 308 PLPEHMIRRAS 318
+P H+ AS
Sbjct: 244 SVPRHINPVAS 254
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 154 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 190
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 245
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 246 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 295
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
Y++ +G+G F V C +R+T ++ A+K+V + K+ + + + L+ H+ K
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
+ H V++ + + +VFE + G L F+ +KR + + + + RQ+
Sbjct: 87 H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
LE++ Y HD +IH D+KP +LL S E +KL G+ AI+L
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF---------------GVAIQLG 186
Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
+ G A V T H+ APEV+ + P D+W G IL L +G + T E
Sbjct: 187 ESGLVA------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
L E + ++N + + ES K
Sbjct: 241 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 266
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L DP+ER+T +ALNHP+ +
Sbjct: 267 --------------DLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
F+Y N+ F+ L P+L D+ +R + +LL+++ Y H ++H D+K
Sbjct: 109 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
P N++ + E KL +LID+G F + ++ V++R
Sbjct: 155 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 191
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
+++ PE+++ L + Y DMWS+GC+ + E F H+N + L + + LG
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 246
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
+ G Y + P E V R S K LK M + + D
Sbjct: 247 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 296
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
L LLRYD ERLTA +A+ HP+F+ +
Sbjct: 297 LDKLLRYDHQERLTALEAMTHPYFQQV 323
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 135/361 (37%), Gaps = 100/361 (27%)
Query: 55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRK 104
H EN P+ +G G V C + T + A+K++ +++
Sbjct: 10 HSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 105 YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKY 163
R+A + E+D+L+ ++ G + +Q+++ ++ +VF+ + LFD+L
Sbjct: 66 LREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-- 118
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
R+ R LLE + +H L ++H DLKPENIL
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL---------------------- 156
Query: 224 RCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWS 275
L IKL DFG S D + + T Y APE+I G+ DMWS
Sbjct: 157 --LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
G I+ L G F + + M+R G ++ GS PE
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PE 252
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
D T+ DL+ L P +R TA +AL HPFF+
Sbjct: 253 W------------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 396 N 396
Sbjct: 289 Q 289
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
Y++ +G+G F V C +R+T ++ A+K+V + K+ + + + L+ H+ K
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
+ H V++ + + +VFE + G L F+ +KR + + + + RQ+
Sbjct: 85 H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
LE++ Y HD +IH D+KP +LL S E +KL G+ AI+L
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF---------------GVAIQLG 184
Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
+ G A V T H+ APEV+ + P D+W G IL L +G + T E
Sbjct: 185 ESGLVA------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
L E + ++N + + ES K
Sbjct: 239 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 264
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ +L DP+ER+T +ALNHP+ +
Sbjct: 265 --------------DLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-------RDAAMIEIDVLQHLA 120
Y++ ++G G F V +C + T + A K ++ R R+ E+++L+ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
+ + + + F+ + + ++ E + G LFDFL + D +F +Q+L
Sbjct: 88 H------PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQIL 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H R+ H DLKPENI+L+ + +P + IKLIDFG
Sbjct: 140 DGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIKLIDFGI 179
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + N +I T + APE++ DMWS+G I L +G + F E
Sbjct: 180 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
L + E S + + RR
Sbjct: 240 TLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 134/354 (37%), Gaps = 100/354 (28%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRKYRDAAMI 111
EN P+ +G G V C + T + A+K++ +++ R+A +
Sbjct: 4 ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDL 170
E+D+L+ ++ G + +Q+++ ++ +VF+ + LFD+L
Sbjct: 60 EVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
R+ R LLE + +H L ++H DLKPENIL L
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENIL------------------------LDDDM 148
Query: 231 AIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILVE 282
IKL DFG S D + + T Y APE+I G+ DMWS G I+
Sbjct: 149 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
L G F + + M+R G ++ GS PE
Sbjct: 209 LLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PEW------ 240
Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
D T+ DL+ L P +R TA +AL HPFF+
Sbjct: 241 ------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLA 120
Y++ ++G G F V +C + T + A K ++ R R+ E+++L+ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
+ + + + F+ + + ++ E + G LFDFL + D +F +Q+L
Sbjct: 67 ------HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQIL 118
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H R+ H DLKPENI+L+ + +P + IKLIDFG
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIKLIDFGI 158
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + N +I T + APE++ DMWS+G I L +G + F E
Sbjct: 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
L + E S + + RR
Sbjct: 219 TLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G+GT+G V D Q R+AIK + +Y EI + +HL + VQ
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IVQ 83
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHDLRL 190
F I I E++ L R+K+ P + + + +Q+LE + Y+HD ++
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---AFDNQNH 247
+H D+K +N+L+ + S +K+ DFG++ A N
Sbjct: 144 VHRDIKGDNVLINTY-----------------------SGVLKISDFGTSKRLAGINPCT 180
Query: 248 SSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
+ T Y APE+I G+ D+WS+GC ++E+ TG+ F
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 43/237 (18%)
Query: 63 NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
+L P ++I+ ++G+G FG+V + +++T A KV+ +S + D M+EID+L
Sbjct: 32 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + F Y N++ I+ E D + P ++ +Q
Sbjct: 91 C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L+++ Y+HD ++IH DLK NIL L G IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
+A + Q + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 181 VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
++ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E + S + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
++ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E + S + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G+GT+G V D Q R+AIK + +Y EI + +HL + VQ
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IVQ 69
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHDLRL 190
F I I E++ L R+K+ P + + + +Q+LE + Y+HD ++
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---AFDNQNH 247
+H D+K +N+L+ + S +K+ DFG++ A N
Sbjct: 130 VHRDIKGDNVLINTY-----------------------SGVLKISDFGTSKRLAGINPCT 166
Query: 248 SSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
+ T Y APE+I G+ D+WS+GC ++E+ TG+ F
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
++ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E S + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 129/346 (37%), Gaps = 95/346 (27%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---------SIRKYRDAAMIEIDVLQ 117
+Y +G G V C R T A+K++ + + R+A E +L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
+A G H + + + ++ + + +VF+ + LFD+L + R R
Sbjct: 155 QVA-----GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMR 207
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
LLE+V+++H ++H DLKPENIL L + I+L D
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENIL------------------------LDDNMQIRLSD 243
Query: 237 FGSTAF--DNQNHSSIVSTRHYRAPEVI------LGLGWSYPCDMWSVGCILVELCTGEA 288
FG + + + T Y APE++ G+ D+W+ G IL L G
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
F + M+R G ++ S W
Sbjct: 304 PFWHRRQI---------------LMLRMIMEGQYQF----SSPEW--------------- 329
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D ST+ DL+ LL+ DP RLTA QAL HPFF
Sbjct: 330 ------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
++ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E S + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
++ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E S + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
Y+I+ +GEG+FG+V + T ++VA+K++ + LAK+D G
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 60
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
H +++ + ++ I +V E G LFD++ +R+K R
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q++ +V Y H +++H DLKPEN+L L + +K
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 153
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
+ DFG + D + + +Y APEVI G ++ P D+WS G IL V LC
Sbjct: 154 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL 119
+G+ + RYKI+ K+G G V D +VAIK + + ++ + + + +
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE--REV 62
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ + + V + + + + +V E + GP+L ++++ + P VD F Q+
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQI 120
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L+ + + HD+R++H D+KP+NIL+ S++ +K+ DFG
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNK------------------------TLKIFDFG 156
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
T+ NH ++ T Y +PE G D++S+G +L E+ GE F
Sbjct: 157 IAKALSETSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
Y+I+ +GEG+FG+V + T ++VA+K++ + LAK+D G
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 59
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
H +++ + ++ I +V E G LFD++ +R+K R
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 116
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q++ +V Y H +++H DLKPEN+L L + +K
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 152
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
+ DFG + D + + +Y APEVI G ++ P D+WS G IL V LC
Sbjct: 153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 138/337 (40%), Gaps = 84/337 (24%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K ++ K R + Q
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQ--------- 113
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG A
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 211
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +H+S+ + T +Y APEV+ + CD WS+G I L G F ++ L
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL-- 269
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
A+ P G + R G PE + E +K
Sbjct: 270 ------AISP-----------GXKTRIRXGQYEFPNPEWSEVSEEVKX------------ 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R T + NHP+
Sbjct: 301 ------------LIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
Y+I+ +GEG+FG+V + T ++VA+K++ + LAK+D G
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 50
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
H +++ + ++ I +V E G LFD++ +R+K R
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 107
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q++ +V Y H +++H DLKPEN+L L + +K
Sbjct: 108 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 143
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
+ DFG + D + + +Y APEVI G ++ P D+WS G IL V LC
Sbjct: 144 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
Y+I+ +GEG+FG+V + T ++VA+K++ + LAK+D G
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 54
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
H +++ + ++ I +V E G LFD++ +R+K R
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 111
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
F +Q++ +V Y H +++H DLKPEN+L L + +K
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 147
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
+ DFG + D + + +Y APEVI G ++ P D+WS G IL V LC
Sbjct: 148 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 133/334 (39%), Gaps = 83/334 (24%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDK 124
Y IL ++G G FG V C ++ T K + + + KY EI ++ L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLH---- 106
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ + + F+ + + ++ E L G LFD + Y +++ + RQ E +
Sbjct: 107 --HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN-YMRQACEGLK 163
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
+MH+ ++H D+KPENI+ + K+S++K+IDFG
Sbjct: 164 HMHEHSIVHLDIKPENIMCETK----------------------KASSVKIIDFGLATKL 201
Query: 244 NQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
N + V+ T + APE++ + DMW++G + L +G + F ++LE L
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN 261
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
++R + E A S S +A
Sbjct: 262 VKRC------------------------DWEFDEDAFSSVSPEA---------------- 281
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
D + LL+ +P +RLT AL HP+ +
Sbjct: 282 ------KDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
Y I ++G G F V +C ++ T A K + R+ R+ R+ E+ +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
+ + + + ++ R + ++ E + G LFDFL + + + F +Q+L
Sbjct: 74 ------HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ V Y+H ++ H DLKPENI+L+ I +P IKLIDFG
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D +I T + APE++ DMWS+G I L +G + F E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
LA + E + S + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 134/335 (40%), Gaps = 80/335 (23%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAM-IEIDVLQHLAK 121
N+ + + +G G F V R T + A+K ++ +RD+++ EI VL+ +
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGRQLL 179
+ V + + ++ H +V + + G LFD L+R Y LV + Q+L
Sbjct: 66 EN------IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVL 116
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
+V Y+H+ ++H DLKPEN+L ++ E ++S I + DFG
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPE---------------------ENSKIMITDFGL 155
Query: 240 TAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ + N S+ T Y APEV+ +S D WS+G I L G F +E E
Sbjct: 156 SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF--YEETES 213
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
+ + E Y+ S W
Sbjct: 214 ----------------KLFEKIKEGYYEFESPF-W------------------------- 231
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
D + D + LL DP+ER T +AL+HP+
Sbjct: 232 --DDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 81/332 (24%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y + +G G++ C + T A+KV+ + RD + EI++L G
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSE-EIEILLRY-----GQH 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ + +++ +D H+ +V E + G L D + R K+ F + ++V Y+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLH 138
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
++H DLKP NIL V S + E CL ++ DFG
Sbjct: 139 SQGVVHRDLKPSNILYVD----------ESGNPE----CL------RICDFGFAKQLRAE 178
Query: 247 HSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
+ +++ T ++ APEV+ G+ CD+WS+G +L + G F
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF------------- 225
Query: 304 RALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
A GP PE ++ R G K+ G NW N VS
Sbjct: 226 -ANGPSDTPEEILTRIGSG--KFTLSGG--NW--------------------NTVS---- 256
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
T DL+ +L DP +RLTA+Q L HP+
Sbjct: 257 ---ETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 81/332 (24%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y + +G G++ C + T A+KV+ + RD + EI++L G
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSE-EIEILLRY-----GQH 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ + +++ +D H+ +V E + G L D + R K+ F + ++V Y+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLH 138
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
++H DLKP NIL V S + E CL ++ DFG
Sbjct: 139 SQGVVHRDLKPSNILYVD----------ESGNPE----CL------RICDFGFAKQLRAE 178
Query: 247 HSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
+ +++ T ++ APEV+ G+ CD+WS+G +L + G F
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF------------- 225
Query: 304 RALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
A GP PE ++ R G K+ G NW N VS
Sbjct: 226 -ANGPSDTPEEILTRIGSG--KFTLSGG--NW--------------------NTVS---- 256
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
T DL+ +L DP +RLTA+Q L HP+
Sbjct: 257 ---ETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 136/343 (39%), Gaps = 88/343 (25%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
E++ Y +G G F V+ D++TQ+ VAIK + +++ + EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
+ + V + + ++ H+ ++ + + G LFD +++ Y R+ R
Sbjct: 73 IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
Q+L++V Y+HDL ++H DLKPEN+L S L + S I
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ DFG + ++ S+ T Y APEV+ +S D WS+G I L G F
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ + + E+ L KA + D
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S + D + D + L+ DP +R T QAL HP+
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 61/337 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y+++ K+G G + V E + ERV +K+++ +I + +N +GG+
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKP------VKKKKIKREVKILENLRGGT 93
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ I D + +VFE + + F + Y +R + +LL+++ Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF----KQLYQILTDFDIRFYMYELLKALDYCH 149
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-- 244
++H D+KP N+++ + ++LID+G F +
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQ-----------------------KKLRLIDWGLAEFYHPA 186
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
Q ++ V++R+++ PE+++ + Y DMWS+GC+L + E F +N + L +
Sbjct: 187 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
Query: 303 ERALGPLPEH-MIRRASRGTEKYFR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
+ LG + +++ + +F + SR W E + E+ +++VS
Sbjct: 247 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRW-ENFIHSEN----------RHLVS 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DLL LLRYD +RLTA++A+ HP+F
Sbjct: 296 -------PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
E++ Y +G G F V+ D++TQ+ VAIK + + + ++ +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
+ + V + + ++ H+ ++ + + G LFD +++ Y R+ R
Sbjct: 73 IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
Q+L++V Y+HDL ++H DLKPEN+L S L + S I
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ DFG + ++ S+ T Y APEV+ +S D WS+G I L G F
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ + + E+ L KA + D
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S + D + D + L+ DP +R T QAL HP+
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 82
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 140
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 141 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 176
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
++ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 237 EYSIPKHINPVAASLIQKMLQ 257
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 61/337 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y+++ K+G G + V E + ERV +K+++ +I + +N +GG+
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKP------VKKKKIKREVKILENLRGGT 98
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ I D + +VFE + + F + Y +R + +LL+++ Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF----KQLYQILTDFDIRFYMYELLKALDYCH 154
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-- 244
++H D+KP N+++ + ++LID+G F +
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQ-----------------------KKLRLIDWGLAEFYHPA 191
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
Q ++ V++R+++ PE+++ + Y DMWS+GC+L + E F +N + L +
Sbjct: 192 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
Query: 303 ERALGPLPEH-MIRRASRGTEKYFR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
+ LG + +++ + +F + SR W E + E+ +++VS
Sbjct: 252 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRW-ENFIHSEN----------RHLVS 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DLL LLRYD +RLTA++A+ HP+F
Sbjct: 301 -------PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI---EIDVLQHLAKND 123
Y I +GEG+FG+V +TQ++VA+K + R + K D M EI L+ L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR--- 67
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
H +++ + I +V E G LFD++ K D R F +Q++ ++
Sbjct: 68 ---HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIE 122
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
Y H +++H DLKPEN+L L + +K+ DFG +
Sbjct: 123 YCHRHKIVHRDLKPENLL------------------------LDDNLNVKIADFGLSNIM 158
Query: 243 -DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTH--ENL-- 296
D + + +Y APEVI G ++ P D+WS G +L + G F NL
Sbjct: 159 TDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
Query: 297 ---EHLAMMERALGPLPEHMIRR 316
+ +M L P + +IRR
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRR 241
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
E++ Y +G G F V+ D++TQ+ VAIK + + + ++ +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
+ + V + + ++ H+ ++ + + G LFD +++ Y R+ R
Sbjct: 73 IK------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
Q+L++V Y+HDL ++H DLKPEN+L S L + S I
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ DFG + ++ S+ T Y APEV+ +S D WS+G I L G F
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
EN + + + +KA + D
Sbjct: 220 D-EN---------------------------------------DAKLFEQILKAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S + D + D + L+ DP +R T QAL HP+
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
E++ Y +G G F V+ D++TQ+ VAIK + + + ++ +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
+ + V + + ++ H+ ++ + + G LFD +++ Y R+ R
Sbjct: 73 IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
Q+L++V Y+HDL ++H DLKPEN+L S L + S I
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ DFG + ++ S+ T Y APEV+ +S D WS+G I L G F
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ + + E+ L KA + D
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S + D + D + L+ DP +R T QAL HP+
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 78
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 136
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 137 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 172
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
++ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 233 EYSIPKHINPVAASLIQKMLQ 253
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 78
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 136
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 137 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 172
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
++ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 233 EYSIPKHINPVAASLIQKMLQ 253
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 46/297 (15%)
Query: 55 HYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYRDA- 108
H+V E P +++L +G+G+FG+V + + A+KV++ + K RD
Sbjct: 16 HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 109 -AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPF 166
+E D+L + V++ F + ++ + L G LF L +K F
Sbjct: 76 RTKMERDILADV------NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMF 127
Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
+ V+ + +L + ++H L +I+ DLKPENILL
Sbjct: 128 TEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL------------------------ 163
Query: 227 PKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ IKL DFG + A D++ + S T Y APEV+ G S+ D WS G ++ E+
Sbjct: 164 DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRL-NWPEGA 337
TG FQ + E + ++ +A +P+ + A F+R +RL + P+GA
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 163/361 (45%), Gaps = 51/361 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKNDK 124
Y I +G G++G V +D+ T++ VAIK V R D I EI +L L K+D
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDY 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA- 183
+ + I + + + IV E L K P+ L E + +L ++
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLL 140
Query: 184 ---YMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAI--KLID 236
++H+ +IH DLKP N LL +K+ G R+ + E K + I L +
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE-------KDTNIVNDLEE 193
Query: 237 FGSTAFDNQN----HSSIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCTGEALFQ 291
N+N +S V TR YRAPE+I L ++ D+WS GCI EL + Q
Sbjct: 194 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQ 250
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSR--LNW---PEGAVSRESIKAV 346
+H N L P R ++K + +R LN G + + +K +
Sbjct: 251 SHIN---DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI 307
Query: 347 KKLDRLKNM------VSLHVDRARSTLTD----LLHGLLRYDPSERLTARQALNHPFFRN 396
K + +K + +++ + +++D LL +L+++P++R+T QAL+HP+ ++
Sbjct: 308 NKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
Query: 397 L 397
+
Sbjct: 368 V 368
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 102
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 160
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 161 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 196
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 257 EYSIPKHINPVAASLIQKMLQ 277
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 58/250 (23%)
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
P +V+ Q+L+ + Y+H ++H DLKP NIL++ P R +M F
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG----PERGRVKIADMGFAR 180
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELC 284
L S L D +V T YRAPE++LG ++ D+W++GCI EL
Sbjct: 181 LFNSPLKPLADL----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 285 TGEALFQTHE------NLEHLAMMERALG--------------PLPEHMIRRASRGTEKY 324
T E +F + N H ++R +PEH K
Sbjct: 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH------STLMKD 284
Query: 325 FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
FRR + N +K +++ H + S LL LL DP +R+T
Sbjct: 285 FRRNTYTN----------CSLIKYMEK-------HKVKPDSKAFHLLQKLLTMDPIKRIT 327
Query: 385 ARQALNHPFF 394
+ QA+ P+F
Sbjct: 328 SEQAMQDPYF 337
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 100
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 158
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 159 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 194
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 255 EYSIPKHINPVAASLIQKMLQ 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 40/273 (14%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIK---VVRSIRKYRDAAMIEIDVLQHLAKND 123
+Y L K+GEG+FG+ + + + IK + R K R+ + E+ VL ++
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH-- 82
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ VQ R F+ + IV + G LF + K F D + ++ Q+ ++
Sbjct: 83 ----PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++HD +++H D+K +NI L K ++L DFG
Sbjct: 139 KHVHDRKILHRDIKSQNIFLT------------------------KDGTVQLGDFGIARV 174
Query: 243 DNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ--THENLE 297
N + + T +Y +PE+ ++ D+W++GC+L ELCT + F+ + +NL
Sbjct: 175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSR 330
L ++ + P+ H + F+R R
Sbjct: 235 -LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+G+G F + E D T+E A K+V +S+ R+ +EI + + LA H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 76
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V +F+ + + +V E SL + KR K P R + RQ++ Y+H
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 134
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
R+IH DLK N+ L + +K+ DFG +D +
Sbjct: 135 RVIHRDLKLGNLFL------------------------NEDLEVKIGDFGLATKVEYDGE 170
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
+P+H+ A+ +K +
Sbjct: 231 EYSIPKHINPVAASLIQKMLQ 251
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52 REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
+EGH E P ++++L +G+G+FG+V + ++ A+KV++ + K R
Sbjct: 15 KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 68
Query: 107 DA--AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
D +E D+L + V++ F + ++ + L G LF L +K
Sbjct: 69 DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
F + V+ + +L ++ ++H L +I+ DLKPENILL
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 159
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
+ IKL DFG + + D++ + S T Y APEV+ G + D WS G ++
Sbjct: 160 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
E+ TG FQ + E + M+ +A +P+ + A F+R G
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
Query: 341 ESIK 344
E IK
Sbjct: 277 EEIK 280
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52 REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
+EGH E P ++++L +G+G+FG+V + ++ A+KV++ + K R
Sbjct: 16 KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 69
Query: 107 DAA--MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
D +E D+L + V++ F + ++ + L G LF L +K
Sbjct: 70 DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 121
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
F + V+ + +L ++ ++H L +I+ DLKPENILL
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 160
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
+ IKL DFG + + D++ + S T Y APEV+ G + D WS G ++
Sbjct: 161 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
E+ TG FQ + E + M+ +A +P+ + A F+R G
Sbjct: 218 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 277
Query: 341 ESIK 344
E IK
Sbjct: 278 EEIK 281
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52 REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
+EGH E P ++++L +G+G+FG+V + ++ A+KV++ + K R
Sbjct: 15 KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 68
Query: 107 DAA--MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
D +E D+L + V++ F + ++ + L G LF L +K
Sbjct: 69 DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
F + V+ + +L ++ ++H L +I+ DLKPENILL
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 159
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
+ IKL DFG + + D++ + S T Y APEV+ G + D WS G ++
Sbjct: 160 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
E+ TG FQ + E + M+ +A +P+ + A F+R G
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
Query: 341 ESIK 344
E IK
Sbjct: 277 EEIK 280
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 59/272 (21%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---------AMIEIDVLQ 117
+Y +S +G G FG V D++ + V +K ++ + D +EI +L
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSL--FDFLKRNKYCPFPVDLVREFG 175
+ ++ +++ + F+ + +V EK G L F F+ R+ P L
Sbjct: 85 RVEH------ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP--LASYIF 136
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
RQL+ +V Y+ +IH D+K ENI +++ +F IKLI
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENI-VIAEDF-----------------------TIKLI 172
Query: 236 DFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALF-Q 291
DFGS A+ + + T Y APEV++G + P +MWS+G L L E F +
Sbjct: 173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232
Query: 292 THENLEH------------LAMMERALGPLPE 311
E +E ++++ L P+PE
Sbjct: 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPE 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 95/355 (26%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR------------- 100
G YV + Y + K+G G +G VL C ++ AIKV++
Sbjct: 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 101 -SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-F 157
+I K+ + EI +L+ L + +++ + F+ + + +V E G LF+
Sbjct: 84 KNIEKFHEEIYNEISLLKSL------DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
+ R+K+ + +Q+L + Y+H ++H D+KPENILL + +
Sbjct: 138 INRHKFDECDAANIM---KQILSGICYLHKHNIVHRDIKPENILLENKNSL--------- 185
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWS 275
IK++DFG ++F ++++ + T +Y APEV L ++ CD+WS
Sbjct: 186 ------------LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWS 232
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
G I+ L G F G + +I++ +G KY+ + +W
Sbjct: 233 CGVIMYILLCGYPPFG---------------GQNDQDIIKKVEKG--KYYFDFN--DW-- 271
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN 390
KN+ D A+ +L+ +L YD ++R TA +ALN
Sbjct: 272 -----------------KNI----SDEAK----ELIKLMLTYDYNKRCTAEEALN 301
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+K+ + +G+G+F V T VAIK++ Y+ A M++ V + + +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQ-RVQNEVKIHCQLKH 70
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+++ N+F+ N++ +V E + +N+ PF + R F Q++ + Y+H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
++H DL N+LL + IK+ + ++ +MP ++ H
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP---------------------HEKH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT 292
++ T +Y +PE+ D+WS+GC+ L G F T
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 369 DLLHGLLRYDPSERLTARQALNHPFF 394
DL+H LLR +P++RL+ L+HPF
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
++ F +L + +H+ ++H DL P NILL + I + + +
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE------------ 183
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
TA N+ H V+ R YRAPE+++ G++ DMWS GC++ E+ +AL
Sbjct: 184 --------DTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
F+ L + +G P E ++ +S Y R S N P A + AV
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR-NSLSNVPARAWT-----AV-- 285
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
V A DL+ +L ++P R++ QAL HP+F +L
Sbjct: 286 -----------VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 133/338 (39%), Gaps = 81/338 (23%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
T Y++ +G G++ C + T A+K+ I K + EI++L
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRY--- 72
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
G + + +++ +D ++ +V E + G L D + R K+ F + ++
Sbjct: 73 --GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKT 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
V Y+H ++H DLKP NIL V SG P+S I++ DFG
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDE------------SGN------PES--IRICDFGFAK 168
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+ +++ T ++ APEV+ G+ CD+WS+G +L + TG F
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-------- 220
Query: 299 LAMMERALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
A GP PE ++ R G+ K+ G N
Sbjct: 221 ------ANGPDDTPEEILARI--GSGKFSLSGGYWN------------------------ 248
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
T DL+ +L DP +RLTA L HP+
Sbjct: 249 -----SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
++ F +L + +H+ ++H DL P NILL + I + + +
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE------------ 183
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
TA N+ H V+ R YRAPE+++ G++ DMWS GC++ E+ +AL
Sbjct: 184 --------DTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
F+ L + +G P E ++ +S Y R S N P A + AV
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR-NSLSNVPARAWT-----AV-- 285
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
V A DL+ +L ++P R++ QAL HP+F +L
Sbjct: 286 -----------VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++ L +G+GTFG+V+ ++ T A+K+++ ++ + + +V L +N +
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 204
Query: 128 SH---CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
S ++ F + +C V E G LF L R + F D R +G +++ ++
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 262
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H + +++ DLK EN++L K IK+ DFG
Sbjct: 263 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 298
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D + T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 358
Query: 298 HLAMME-----RALGP 308
L +ME R LGP
Sbjct: 359 ELILMEEIRFPRTLGP 374
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++ L +G+GTFG+V+ ++ T A+K+++ ++ + + +V L +N +
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 207
Query: 128 SH---CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
S ++ F + +C V E G LF L R + F D R +G +++ ++
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 265
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H + +++ DLK EN++L K IK+ DFG
Sbjct: 266 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 301
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D + T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 302 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 361
Query: 298 HLAMME-----RALGP 308
L +ME R LGP
Sbjct: 362 ELILMEEIRFPRTLGP 377
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 39/223 (17%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
L ++G+G+FG V + D +TQ+ VAIK++ + EI VL SS
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSS 81
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ + + + + I+ E LG S D L+ + F + + +++L+ + Y+H
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHS 138
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ 245
+ IH D+K N+LL S G+ +KL DFG D Q
Sbjct: 139 EKKIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQ 174
Query: 246 -NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
++ V T + APEVI + D+WS+G +EL GE
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 43/225 (19%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
L K+G+G+FG V + D +TQ+ VAIK++ + EI VL S
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
+ + + + I+ E LG S D L+ P P+D + R++L+ + Y+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 120
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
H + IH D+K N+LL S GE +KL DFG D
Sbjct: 121 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 156
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
Q ++ V T + APEVI + D+WS+G +EL GE
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 142/360 (39%), Gaps = 91/360 (25%)
Query: 44 SPPRR-----DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKV 98
+PPRR D+D +L + + +L K+GEG++G V + ++T + VAIK
Sbjct: 9 NPPRRQLKKLDED-------SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ 61
Query: 99 VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP-SLFDF 157
V + + EI ++Q S H V+ + + IV E G S+ D
Sbjct: 62 V-PVESDLQEIIKEISIMQQC------DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 158 LK-RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS 216
++ RNK D + + L+ + Y+H +R IH D+K NILL + KL +
Sbjct: 115 IRLRNKT--LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF--- 169
Query: 217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSV 276
A +L D + + ++ T + APEVI +G++ D+WS+
Sbjct: 170 ------------GVAGQLTDXMA------KRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
G +E+ G+ + + + M+ P P FR+ PE
Sbjct: 212 GITAIEMAEGKPPYADIHPMRAIFMI--PTNPPPT-------------FRK------PE- 249
Query: 337 AVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
L D TD + L P +R TA Q L HPF R+
Sbjct: 250 ---------------------LWSD----NFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 47/265 (17%)
Query: 60 LGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQH 118
LG +T ++ L +G+GTFG+V+ ++ T A+K+++ ++ + + +V
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHT 55
Query: 119 LAKNDKGGSS---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREF 174
L +N +S ++ F + +C V E G LF L R + F D R +
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFY 113
Query: 175 GRQLLESVAYMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
G +++ ++ Y+H + +++ DLK EN++L K IK
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLML------------------------DKDGHIK 149
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ DFG D T Y APEV+ + D W +G ++ E+ G F
Sbjct: 150 ITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
Query: 291 --QTHENLEHLAMME-----RALGP 308
Q HE L L +ME R LGP
Sbjct: 210 YNQDHEKLFELILMEEIRFPRTLGP 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 43/237 (18%)
Query: 59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVL 116
NL + + L K+G+G+FG V + D +TQ+ VAIK++ + EI VL
Sbjct: 15 NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVRE 173
S + + + + I+ E L G S D L+ P P+D +
Sbjct: 75 SQC------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIAT 123
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
R++L+ + Y+H + IH D+K N+LL S GE +K
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLL-------------SEHGE-----------VK 159
Query: 234 LIDFGSTA--FDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
L DFG D Q + V T + APEVI + D+WS+G +EL GE
Sbjct: 160 LADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
L ++G+G+FG V + D T+E VAIK++ + EI VL S
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 77
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ + + + I+ E LG S D LK P + R++L+ + Y+H
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHS 134
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ 245
R IH D+K N+LL S G+ +KL DFG D Q
Sbjct: 135 ERKIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQ 170
Query: 246 -NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
+ V T + APEVI + + D+WS+G +EL GE
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 46/238 (19%)
Query: 63 NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
+L P ++I+ ++G+ FG+V + +++T A KV+ +S + D M+EID+L
Sbjct: 7 DLNPEDFWEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILA- 62
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + F Y N++ I+ E D + P ++ +Q
Sbjct: 63 -----SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 117
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
L+++ Y+HD ++IH DLK NIL L G IKL DFG
Sbjct: 118 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 153
Query: 239 STAFDN----QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
+A + Q S + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 154 VSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 46/256 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++ L +G+GTFG+V+ ++ T A+K+++ ++ + + +V L +N +
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 65
Query: 128 S---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
S ++ F + +C V E G LF L R + F D R +G +++ ++
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 123
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H + +++ DLK EN++L K IK+ DFG
Sbjct: 124 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 159
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 160 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 219
Query: 298 HLAMME-----RALGP 308
L +ME R LGP
Sbjct: 220 ELILMEEIRFPRTLGP 235
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 46/256 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++ L +G+GTFG+V+ ++ T A+K+++ ++ + + +V L +N +
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 66
Query: 128 S---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
S ++ F + +C V E G LF L R + F D R +G +++ ++
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 124
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H + +++ DLK EN++L K IK+ DFG
Sbjct: 125 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 160
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 161 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 220
Query: 298 HLAMME-----RALGP 308
L +ME R LGP
Sbjct: 221 ELILMEEIRFPRTLGP 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 43/225 (19%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
L K+G+G+FG V + D +TQ+ VAIK++ + EI VL S
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 85
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
+ + + + I+ E LG S D L+ P P+D + R++L+ + Y+
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 140
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
H + IH D+K N+LL S GE +KL DFG D
Sbjct: 141 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 176
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
Q ++ V T + APEVI + D+WS+G +EL GE
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
L K+G+G+FG V + D +TQ+ VAIK++ + EI VL S
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
+ + + + I+ E L G S D L+ P P+D + R++L+ + Y+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 120
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
H + IH D+K N+LL S GE +KL DFG D
Sbjct: 121 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 156
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
Q + V T + APEVI + D+WS+G +EL GE
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 52 REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAM 110
R ++ N + Y + ++G+G F V C + T A K++ + + RD
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK 74
Query: 111 IEIDV-----LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKY 163
+E + LQH + V++ + + +VF+ + G LF D + R Y
Sbjct: 75 LEREARICRKLQH---------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
+ Q+LES+AY H ++H +LKPEN+LL S
Sbjct: 126 SEADASHCIQ---QILESIAYCHSNGIVHRNLKPENLLLASK------------------ 164
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
K +A+KL DFG D++ T Y +PEV+ +S P D+W+ G IL
Sbjct: 165 ---AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Query: 282 ELCTGEALF 290
L G F
Sbjct: 222 ILLVGYPPF 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--- 124
++IL +G G+FGRV R A+KV++ ++ + ++H ND+
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK------EIVVRLKQVEH--TNDERLM 59
Query: 125 -GGSSHCVQIRNWFDYRN--HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
+H IR W +++ I ++ + + G LF L++++ P PV + + ++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFYAAEVCL 117
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
++ Y+H +I+ DLKPENIL L K+ IK+ DFG
Sbjct: 118 ALEYLHSKDIIYRDLKPENIL------------------------LDKNGHIKITDFGFA 153
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ + T Y APEV+ ++ D WS G ++ E+ G F
Sbjct: 154 KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 80/339 (23%)
Query: 61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
E++ ++ +G G F V+ ++ T + A+K + ++++ + EI VL+
Sbjct: 17 AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
+ + V + + ++ NH+ +V + + G LFD + + + RQ
Sbjct: 77 IKHEN------IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQ 128
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+L++V Y+H + ++H DLKPEN+L S + + S I + DF
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQD---------------------EESKIMISDF 167
Query: 238 GSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
G + + + S+ T Y APEV+ +S D WS+G I L G F
Sbjct: 168 GLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF----- 222
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
Y S+L + +KA + D
Sbjct: 223 ----------------------------YDENDSKL-------FEQILKAEYEFD----- 242
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
S + D + D + L+ DP++R T QA HP+
Sbjct: 243 -SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 63
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 122 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 157
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D + T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 158 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 217
Query: 298 HLAMME-----RALGP 308
L +ME R L P
Sbjct: 218 ELILMEEIRFPRTLSP 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D + T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMME-----RALGP 308
L +ME R L P
Sbjct: 215 ELILMEEIRFPRTLSP 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D + T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMME-----RALGP 308
L +ME R L P
Sbjct: 215 ELILMEEIRFPRTLSP 230
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIE--IDVLQHLAKNDKGGSSHC 130
K+G G FG V +R + IK + R IE I+VL+ L +
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL------DHPNI 82
Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAYMHD 187
++I F+ +++ IV E G L + + + + V E +Q++ ++AY H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
++H DLKPENIL F+ S IK+IDFG + F +
Sbjct: 143 QHVVHKDLKPENIL---------------------FQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 247 HSS-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
HS+ T Y APEV ++ CD+WS G ++ L TG
Sbjct: 182 HSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E Y++ +G+G FG V + +VAIKV+ R D+ ++V
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREF 174
GG +++ +WF+ + +V E+ P+ LFD++ P R F
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCF 144
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q++ ++ + H ++H D+K ENIL+ +R + KL
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILI---------DLRRGCA--------------KL 181
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQ- 291
IDFGS A ++ ++ TR Y PE I + + P +WS+G +L ++ G+ F+
Sbjct: 182 IDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
Query: 292 ------------THENLEHLAMMERALGPLP 310
H + + A++ R L P P
Sbjct: 242 DQEILEAELHFPAHVSPDCCALIRRCLAPKP 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E++ P LFDF+ +L R F
Sbjct: 64 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSF 119
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 156
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 157 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 293 HENL 296
E +
Sbjct: 217 DEEI 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 129/338 (38%), Gaps = 81/338 (23%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
T Y++ +G G++ C + T A+K+ I K + EI++L
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRY--- 72
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
G + + +++ +D ++ +V E G L D + R K+ F + ++
Sbjct: 73 --GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKT 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
V Y+H ++H DLKP NIL V SG P+S I++ DFG
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDE------------SGN------PES--IRICDFGFAK 168
Query: 242 ---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
+N + T ++ APEV+ G+ CD+WS+G +L TG F
Sbjct: 169 QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-------- 220
Query: 299 LAMMERALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
A GP PE ++ R G+ K+ G N
Sbjct: 221 ------ANGPDDTPEEILARI--GSGKFSLSGGYWN------------------------ 248
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
T DL+ L DP +RLTA L HP+
Sbjct: 249 -----SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 153/376 (40%), Gaps = 78/376 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKNDK 124
Y+I +G G++G V +D+ + VAIK V R D I EI +L L K+D
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDY 88
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV-- 182
H + I + + IV E L K P+ L + + +L ++
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLL 142
Query: 183 --AYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++H+ +IH DLKP N LL +K+ G R+ + + + + +
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 239 STAFDN--QNHSSIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCT---------- 285
N + +S V TR YRAPE+I L ++ D+WS GCI EL
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPT 262
Query: 286 -------GEALF---------QTHE--NLEHLAMMERALGPLPEHMIRRASRG-TEKYF- 325
G + F + HE N + L ++ +G PE ++ ++ KY
Sbjct: 263 NRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIK 322
Query: 326 ----RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
R G L+ ++S+E I DLL +LR++ +
Sbjct: 323 LFPTRDGIDLSKKYSSISKEGI-------------------------DLLESMLRFNAQK 357
Query: 382 RLTARQALNHPFFRNL 397
R+T +AL+HP+ +++
Sbjct: 358 RITIDKALSHPYLKDV 373
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
L +ME P
Sbjct: 215 ELILMEEIRFP 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
L +ME P
Sbjct: 215 ELILMEEIRFP 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 65
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 124 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 159
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 160 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 219
Query: 298 HLAMMERALGP 308
L +ME P
Sbjct: 220 ELILMEEIRFP 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
+ L +G+GTFG+V+ ++ T A+K++R +I D + H +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+ H ++ F + +C V E G LF L R + F + R +G +++ ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
Y+H +++ D+K EN++ L K IK+ DFG
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
D T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
L +ME P
Sbjct: 215 ELILMEEIRFP 225
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 112 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 167
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 204
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 205 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
Query: 293 HENL 296
E +
Sbjct: 265 DEEI 268
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 92 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
E +
Sbjct: 245 DEEI 248
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 92 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
E +
Sbjct: 245 DEEI 248
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 99 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 154
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 191
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 192 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
Query: 293 HENL 296
E +
Sbjct: 252 DEEI 255
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 93 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
E +
Sbjct: 246 DEEI 249
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 107 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 162
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 199
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 200 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 293 HENL 296
E +
Sbjct: 260 DEEI 263
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 93 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
E +
Sbjct: 246 DEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 92 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
E +
Sbjct: 245 DEEI 248
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 79 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 171
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 172 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 293 HENL 296
E +
Sbjct: 232 DEEI 235
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 93 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
E +
Sbjct: 246 DEEI 249
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 92 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
E +
Sbjct: 245 DEEI 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 80 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
E +
Sbjct: 233 DEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 79 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 171
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 172 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 293 HENL 296
E +
Sbjct: 232 DEEI 235
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 93 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
E +
Sbjct: 246 DEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 107 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 162
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 199
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 200 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 293 HENL 296
E +
Sbjct: 260 DEEI 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 80 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
E +
Sbjct: 233 DEEI 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 80 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
E +
Sbjct: 233 DEEI 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 65 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
E +
Sbjct: 218 DEEI 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 65 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
E +
Sbjct: 218 DEEI 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 87 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 142
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 179
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 180 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
Query: 293 HENL 296
E +
Sbjct: 240 DEEI 243
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 65 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
E +
Sbjct: 218 DEEI 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 64 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 119
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 156
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 157 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 293 HENL 296
E +
Sbjct: 217 DEEI 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
E L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 63 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 118
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KL
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 155
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
IDFGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 156 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
Query: 293 HENL 296
E +
Sbjct: 216 DEEI 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
++T Y++ ++G+G F V C T + A K++ + + RD +E + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
K+ H F Y +VF+ + G LF D + R Y + Q+
Sbjct: 61 KHPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
LESV + H ++H DLKPEN+LL S K +A+KL DFG
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKS---------------------KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
D Q T Y +PEV+ + P DMW+ G IL L G F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D DL++ +L +P++R+TA +AL HP+
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
++T Y++ +G+G F V C T A K++ + + RD +E + + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
K+ S+ V++ + +VF+ + G LF D + R Y + Q+
Sbjct: 61 KH-----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
LE+V + H + ++H DLKPEN+LL S +C K +A+KL DFG
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLAS-------------------KC--KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
D Q T Y +PEV+ + P D+W+ G IL L G F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY+++ +G G FG D+Q+ E VA+K + R + AA ++ +++ H +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE--RGEKIAANVKREIINHRSLR---- 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
+ V+ + H+ IV E G LF+ + C F D R F +QL+ V
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
+Y H +++ H DLK EN LL S +L K+ DFG S
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKS 166
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
+ +Q S+ V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 167 SVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 58 FNLGENLTPRYKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEI 113
F EN Y + SK +G G F V +C + T + A K ++ R+ +D + EI
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG---------PSLFDFLKRNKYC 164
VL+ LAK+ + + ++ + I ++ E P L + + N
Sbjct: 80 AVLE-LAKS----CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN--- 131
Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
D++R +Q+LE V Y+H ++H DLKP+NILL S
Sbjct: 132 ----DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS-------------------- 166
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHS----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
+ IK++DFG + H+ I+ T Y APE++ + DMW++G I
Sbjct: 167 -IYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
Query: 281 VELCTGEALFQTHENLE 297
L T + F +N E
Sbjct: 224 YMLLTHTSPFVGEDNQE 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
++T Y++ ++G+G F V C T + A K++ + + RD +E + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
K+ H F Y +VF+ + G LF D + R Y + Q+
Sbjct: 61 KHPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
LESV + H ++H DLKPEN+LL S K +A+KL DFG
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKS---------------------KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
D Q T Y +PEV+ + P DMW+ G IL L G F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D DL++ +L +P++R+TA +AL HP+
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 148/369 (40%), Gaps = 97/369 (26%)
Query: 30 VGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQ 89
V HE AA VSP D RE Y+ N K+GEG+ G V ++
Sbjct: 25 VSHEQFRAALQLVVSP---GDPRE--YLANF-----------IKIGEGSTGIVCIATEKH 68
Query: 90 TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK 149
T ++VA+K + ++ R + V+ +D + V + + + + + +V E
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHD-----NVVDMYSSYLVGDELWVVMEF 123
Query: 150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI 208
L G +L D + + + + +L +++Y+H+ +IH D+K ++ILL S I
Sbjct: 124 LEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 180
Query: 209 KLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG 266
KL G+ S E+P R +V T ++ APEVI L
Sbjct: 181 KLSDFGFCAQVSKEVPKR-----------------------KXLVGTPYWMAPEVISRLP 217
Query: 267 WSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFR 326
+ D+WS+G +++E+ GE + L+ + + +L P
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP------------------ 259
Query: 327 RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
R+K++ + S L L +L +PS+R TA+
Sbjct: 260 ------------------------RVKDL-----HKVSSVLRGFLDLMLVREPSQRATAQ 290
Query: 387 QALNHPFFR 395
+ L HPF +
Sbjct: 291 ELLGHPFLK 299
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 130/334 (38%), Gaps = 99/334 (29%)
Query: 68 YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
YK+ S+ +G G G+VL+ ++++TQE+ A+K+++ K R + Q
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
H V+I N + R + IV E L G LF ++ F E + + E+
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ Y+H + + H D+KPEN+L S K P ++ +KL DFG
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG--- 165
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
F + G + CDMWS+G I+ L G F ++ L
Sbjct: 166 FAKET----------------TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----- 204
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
A+ P G + R G PE + E +K
Sbjct: 205 ---AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM--------------- 235
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
L+ LL+ +P++R+T + +NHP+
Sbjct: 236 ---------LIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KLID
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
FGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+ E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
+
Sbjct: 215 EI 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+++ + +G G+FGRV+ ++T A+K++ + ++++ ++H +
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRIQ 96
Query: 127 SS----HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
+ V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY IK+ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KLID
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
FGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+ E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
+
Sbjct: 215 EI 216
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 120 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 174
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 175 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 210
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ T Y APE+IL G++ D W++G ++ E+ G F
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
L +Y++ +G G FG V VAIK V R + + + ++V+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KLID
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
FGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+ E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
+
Sbjct: 215 EI 216
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 77/347 (22%)
Query: 68 YKILSKM-GEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKG 125
YK+ S++ GEG + +V Q + A+K++ + R E++ L
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ----- 68
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
G+ + +++ +F+ +VFEKL G S+ +++ K+ F R + ++ +
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDF 126
Query: 185 MHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+H + H DLKPENIL S E +K+ + S ++ C P ++ GS
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA- 185
Query: 242 FDNQNHSSIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
Y APEV+ + CD+WS+G +L + +G F H
Sbjct: 186 -------------EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH--- 229
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKL 349
G+ W G V R ESI+ K
Sbjct: 230 ------------------------------CGADCGWDRGEVCRVCQNKLFESIQEGKYE 259
Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
K+ + S DL+ LL D +RL+A Q L HP+ +
Sbjct: 260 FPDKDWAHI-----SSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 92 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 146
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 147 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 182
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
++ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 57 VFNLGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMI 111
VF+ E++ ++IL +G+G+FG+V T++ A+K + R
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH---ICIVFEKLGPSLFDFLKRNKYCPFPV 168
E+ ++Q G H + W+ +++ +V LG L L++N + F
Sbjct: 65 ELQIMQ--------GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKE 114
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
+ V+ F +L+ ++ Y+ + R+IH D+KP+NILL + + + ++ LP+
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA-------MLPR 167
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCT 285
+ I +++ T+ Y APE+ G G+S+ D WS+G EL
Sbjct: 168 ETQI---------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 286 G 286
G
Sbjct: 213 G 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ ++T A+K++ + K + + E +LQ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 92 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 146
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 147 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 182
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ T Y APE+IL G++ D W++G ++ E+ G F
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
+ Y + ++G+G F V C + T A K++ + + RD +E +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 55
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
+ C ++++ R H I E +FD + + F + REF
Sbjct: 56 ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 109
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
+Q+LES+AY H ++H +LKPEN+LL S K +A+K
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 148
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
L DFG D++ T Y +PEV+ +S P D+W+ G IL L G F
Sbjct: 149 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 37/248 (14%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
+ T Y APE+IL G++ D W++G ++ E+ G F E ++ +
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG 253
Query: 306 LGPLPEHM 313
P H
Sbjct: 254 KVRFPSHF 261
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 154/379 (40%), Gaps = 79/379 (20%)
Query: 63 NLTPRYKILSKMGEGTFGRV-LECWDRQT--QERVAIK-VVRSIRKYRDAAMIEIDVLQH 118
L+ +KI K+GEGTF V L Q +E++A+K ++ + R AA ++ +
Sbjct: 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTV-- 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQ 177
GG + + ++ F +H+ I L S D L + VRE+
Sbjct: 76 -----AGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSF-----QEVREYMLN 125
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
L +++ +H ++H D+KP N L +L Y G + I+L+ F
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFG---LAQGTHDTKIELLKF 178
Query: 238 GSTAFD----NQNHSSIVSTRH-----------YRAPEVILGL-GWSYPCDMWSVGCILV 281
+ +QN SI +R +RAPEV+ + DMWS G I +
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 282 ELCTGE-ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
L +G ++ ++L LA + M R SR T + + + V
Sbjct: 239 SLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKTFGKSILCSKEVPA 288
Query: 341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG---------------------LLRYDP 379
+ ++ K +RL+ M D + LT + G LL +P
Sbjct: 289 QDLR--KLCERLRGM-----DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNP 341
Query: 380 SERLTARQALNHPFFRNLN 398
+ R+TA +AL HPFF++++
Sbjct: 342 ASRITAEEALLHPFFKDMS 360
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 120
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 178
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 179 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 214
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
++ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 215 ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEID 114
++G N ++I K+G G F V VA+K V+ K R + EID
Sbjct: 25 DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID 84
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-----KLGPSLFDFLKRNKYCPFPVD 169
+L+ L + ++ F N + IV E L + F K+ + P
Sbjct: 85 LLKQL------NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPER 136
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
V ++ QL ++ +MH R++H D+KP N+ + ++
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT------------------------ 172
Query: 230 SAIKLIDFGSTAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+KL D G F + + S+V T +Y +PE I G+++ D+WS+GC+L E+
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
Query: 287 EALF 290
++ F
Sbjct: 233 QSPF 236
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
+ Y + ++G+G F V C + T A K++ + + RD +E +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 55
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
+ C ++++ R H I E +FD + + F + REF
Sbjct: 56 ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 109
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
+Q+LES+AY H ++H +LKPEN+LL S K +A+K
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 148
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
L DFG D++ T Y +PEV+ +S P D+W+ G IL L G F
Sbjct: 149 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
+ Y + ++G+G F V C + T A K++ + + RD +E +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 54
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
+ C ++++ R H I E +FD + + F + REF
Sbjct: 55 ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 108
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
+Q+LES+AY H ++H +LKPEN+LL S K +A+K
Sbjct: 109 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 147
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
L DFG D++ T Y +PEV+ +S P D+W+ G IL L G F
Sbjct: 148 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 84
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 85 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 139
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 140 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 175
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
++ T Y APE+IL G++ D W++G ++ E+ G F
Sbjct: 176 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 126/337 (37%), Gaps = 82/337 (24%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAK 121
T Y++ ++G+G F V C + + A K++ + + RD +E + + L K
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLL 179
+ H F Y +VF+ + G LF D + R Y Q+L
Sbjct: 89 HPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADAS---HCIHQIL 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
ESV ++H ++H DLKPEN+LL S +C K +A+KL DFG
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLAS-------------------KC--KGAAVKLADFGL 179
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
+ Q T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 180 AIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
+ ++ P PE
Sbjct: 240 KLYQQIKAGAYDFPS----------------------PEW-------------------- 257
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
D +L++ +L +P++R+TA QAL HP+
Sbjct: 258 ----DTVTPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E + G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFAEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 100
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 159 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 194
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 41/218 (18%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G FG V C + + VAIK + S R A ++E+ L + +H +
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV--------NHPNIV 65
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL-VREFGRQLLESVAYMHDLR-- 189
+ + N +C+V E G SL++ L + P+ + Q + VAY+H ++
Sbjct: 66 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 190 -LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
LIH DLKP N+LLV+ + +K+ DFG TA D Q H
Sbjct: 126 ALIHRDLKPPNLLLVAG-----------------------GTVLKICDFG-TACDIQTHM 161
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
++ + + APEV G +S CD++S G IL E+ T
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++++ +G GT+G+V + +T + AIKV+ + EI++L+ + + +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 128 SHCVQIR-NWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
+ I+ N + + +V E G S+ D +K K + + R++L ++++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H ++IH D+K +N+LL +++ +KL+DFG +A ++
Sbjct: 146 HQHKVIHRDIKGQNVLLT------------------------ENAEVKLVDFGVSAQLDR 181
Query: 246 N---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTG 286
++ + T ++ APEVI + + D+WS+G +E+ G
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 41/218 (18%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G FG V C + + VAIK + S R A ++E+ L + +H +
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV--------NHPNIV 64
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL-VREFGRQLLESVAYMHDLR-- 189
+ + N +C+V E G SL++ L + P+ + Q + VAY+H ++
Sbjct: 65 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 190 -LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
LIH DLKP N+LLV+ + +K+ DFG TA D Q H
Sbjct: 125 ALIHRDLKPPNLLLVAG-----------------------GTVLKICDFG-TACDIQTHM 160
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
++ + + APEV G +S CD++S G IL E+ T
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 120
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 178
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 179 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 214
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 88/361 (24%)
Query: 44 SPPRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAI 96
S P+R+ R H F L PR + K+GEG+ G V R + + VA+
Sbjct: 2 SSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAV 61
Query: 97 KVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF 155
K + ++ R + V+ +++ + V++ N + + + +V E L G +L
Sbjct: 62 KKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GY 213
D + + + + +L++++ +H +IH D+K ++ILL +KL G+
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDM 273
S E+P R +V T ++ APE+I L + D+
Sbjct: 174 CAQVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW 333
WS+G +++E+ GE + L+ + M+ L P
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------- 245
Query: 334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
RLKN LH + +L L LL DP++R TA + L HPF
Sbjct: 246 -----------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 394 F 394
Sbjct: 284 L 284
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY+++ +G G FG D+Q+ E VA+K + K I+ +V + + +
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 72
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
+ V+ + H+ IV E G LF+ + C F D R F +QL+ V
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 127
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
+Y H +++ H DLK EN LL S +L K+ DFG S
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKS 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
+ +Q S+ V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 166 SVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDA--AMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + + K ++ + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGLAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 69 KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
K+ K+G G FG V + +++ T +VA+K ++ +A + E +V++ L ++DK
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 247
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H V + I I+ E + SL DFLK ++ P+ + +F Q+ E +A++
Sbjct: 248 LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
IH DL+ NIL+ +S C K+ DFG + ++
Sbjct: 302 QRNYIHRDLRAANILVSAS-----------------LVC-------KIADFGLARVIEDN 337
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+++ + + APE I ++ D+WS G +L+E+ T G + N E +
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 302 MERAL-GPLPEH 312
+ER P PE+
Sbjct: 398 LERGYRMPRPEN 409
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 88
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 148 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 183
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + G+R
Sbjct: 244 ISRVEFTFPD------------FVTEGAR------------------------------- 260
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 261 -------DLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46 PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
P+R+ R H F L PR + K+GEG+ G V R + + VA+K
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 183
Query: 99 VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
+ ++ R + V+ +++ + V++ N + + + +V E L G +L D
Sbjct: 184 MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
+ + + + +L++++ +H +IH D+K ++ILL +KL G+
Sbjct: 239 VTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
S E+P R +V T ++ APE+I L + D+WS
Sbjct: 296 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
+G +++E+ GE + L+ + M+ L P
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 365
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
RLKN LH + +L L LL DP++R TA + L HPF
Sbjct: 366 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 42/236 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY+++ +G G FG D+Q E VA+K + K I+ +V + + +
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
+ V+ + H+ IV E G LF+ + C F D R F +QL+ V
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
+Y H +++ H DLK EN LL S +L K+ DFG +
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRL----------------------KIADFGYSKA 166
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
+ +Q S+ V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 167 SVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 79
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 139 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 174
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 175 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 234
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 235 ISRVEFTFPDFVT--------------------EGA------------------------ 250
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 251 ------RDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 43/231 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGG 126
++I+ ++G+G FG+V + +++T A KV+ + + + ++EI++L A D
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL---ATCD--- 74
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + + + I+ E D L+ ++ P ++ RQ+LE++ +
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVVCRQMLEALNF 132
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD- 243
+H R+IH DLK N+L+ L G I+L DFG +A +
Sbjct: 133 LHSKRIIHRDLKAGNVLMT------LEG------------------DIRLADFGVSAKNL 168
Query: 244 --NQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
Q S + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 69 KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
K+ K+G G FG V + +++ T +VA+K ++ +A + E +V++ L ++DK
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 74
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H V + I I+ E + SL DFLK ++ P+ + +F Q+ E +A++
Sbjct: 75 LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
IH DL+ NIL+ +S C K+ DFG + ++
Sbjct: 129 QRNYIHRDLRAANILVSAS-----------------LVC-------KIADFGLARVIEDN 164
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+++ + + APE I ++ D+WS G +L+E+ T G + N E +
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 302 MERAL-GPLPEH 312
+ER P PE+
Sbjct: 225 LERGYRMPRPEN 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE I G D+WS+G + E G+ F+ + E
Sbjct: 163 APSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 239 ------RDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 94
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 152
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 153 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 188
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 189 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46 PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
P+R+ R H F L PR + K+GEG+ G V R + + VA+K
Sbjct: 47 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 106
Query: 99 VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
+ ++ R + V+ +++ + V++ N + + + +V E L G +L D
Sbjct: 107 MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
+ + + + +L++++ +H +IH D+K ++ILL +KL G+
Sbjct: 162 VTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
S E+P R +V T ++ APE+I L + D+WS
Sbjct: 219 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
+G +++E+ GE + L+ + M+ L P
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 288
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
RLKN LH + +L L LL DP++R TA + L HPF
Sbjct: 289 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 28/251 (11%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ I +G+G FG V +RQ++ +A+KV+ + + A +E + + +
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ +++ +F + ++ E P + + K F + +L +++Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
R+IH D+KPEN+LL S+GE+ K+ DFG S +
Sbjct: 131 KRVIHRDIKPENLLL-------------GSNGEL-----------KIADFGWSVHAPSSR 166
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
+++ T Y PE+I G D+WS+G + E G F+ H E + R
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 307 GPLPEHMIRRA 317
P+ + A
Sbjct: 227 FTFPDFVTEGA 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 43/231 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGG 126
++I+ ++G+G FG+V + +++T A KV+ + + + ++EI++L A D
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL---ATCD--- 66
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAY 184
+ V++ + + + I+ E D L+ ++ P ++ RQ+LE++ +
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVVCRQMLEALNF 124
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD- 243
+H R+IH DLK N+L+ + G+ I+L DFG +A +
Sbjct: 125 LHSKRIIHRDLKAGNVLM-------------TLEGD-----------IRLADFGVSAKNL 160
Query: 244 --NQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
Q S + T ++ APEV++ + Y D+WS+G L+E+ E
Sbjct: 161 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 37/232 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
+GE ++ +S++G G G V + R + +A K++ K R+ + E+ VL
Sbjct: 10 VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLH 69
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
S + V F I I E + G SL LK K P +++ +
Sbjct: 70 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSI 121
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+L +AY+ + +++H D+KP NIL+ +S GE IKL
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILV-------------NSRGE-----------IKLC 157
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
DFG S + +S V TR Y APE + G +S D+WS+G LVEL G
Sbjct: 158 DFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 66
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 126 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 161
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 222 ISRVEFTFPDFVT--------------------EGA------------------------ 237
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 238 ------RDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 61
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 121 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 156
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 157 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 216
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 217 ISRVEFTFPDFVT--------------------EGA------------------------ 232
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 233 ------RDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 86
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 144
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 145 HSLDLIYRDLKPENLL------IDEQGY------------------IQVTDFGFAKRVKG 180
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 181 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 128/341 (37%), Gaps = 90/341 (26%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
+ L Y++ +G G F +V T E VAIK++ D I EI+ L++L
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
H Q+ + + N I +V E G LFD++ + R RQ+
Sbjct: 66 RHQ------HICQLYHVLETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQI 117
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +VAY+H H DLKPEN+L E+ KL KLIDFG
Sbjct: 118 VSAVAYVHSQGYAHRDLKPENLLF--DEYHKL----------------------KLIDFG 153
Query: 239 STAFDNQNH----SSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTH 293
A N + + Y APE+I G + D+WS+G +L L G F
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG---FLPF 210
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
++ +A+ ++ I R K+ S L
Sbjct: 211 DDDNVMALYKK---------IMRGKYDVPKWLSPSSIL---------------------- 239
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
LL +L+ DP +R++ + LNHP+
Sbjct: 240 ----------------LLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46 PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
P+R+ R H F L PR + K+GEG+ G V R + + VA+K
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 61
Query: 99 VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
+ ++ R + V+ +++ + V++ N + + + +V E L G +L D
Sbjct: 62 MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
+ + + + +L++++ +H +IH D+K ++ILL +KL G+
Sbjct: 117 VTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
S E+P R +V T ++ APE+I L + D+WS
Sbjct: 174 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
+G +++E+ GE + L+ + M+ L P
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 243
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
RLKN LH + +L L LL DP++R TA + L HPF
Sbjct: 244 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 46/253 (18%)
Query: 59 NLGENLTPRYK-----ILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAA-- 109
NLG + P K L +G+G+FG+VL + + A+KV+ ++I K ++
Sbjct: 26 NLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI 85
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
M E +VL KN K V + F + + V + + G LF L+R + C F
Sbjct: 86 MSERNVL---LKNVK--HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-C-FLE 138
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
R + ++ ++ Y+H L +++ DLKPENILL S
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS------------------------ 174
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
I L DFG +N H+S S T Y APEV+ + D W +G +L E+
Sbjct: 175 QGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 285 TGEALFQTHENLE 297
G F + E
Sbjct: 234 YGLPPFYSRNTAE 246
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAKNDKG 125
Y++ ++G+G F V C + A K++ + + RD +E + + L K+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH--- 80
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ V++ + H ++F+ + G LF D + R Y + Q+LE+V
Sbjct: 81 --PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QILEAVL 135
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---ST 240
+ H + ++H DLKPEN+LL S KL G +A+KL DFG
Sbjct: 136 HCHQMGVVHRDLKPENLLLAS----KLKG-----------------AAVKLADFGLAIEV 174
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ Q T Y +PEV+ + P D+W+ G IL L G F
Sbjct: 175 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
D DL++ +L +PS+R+TA +AL HP+ +
Sbjct: 249 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 284
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ ++ G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 34/264 (12%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
Y + + +G G++G V + T+ R A K+ + + D EI++++ L
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL------D 64
Query: 127 SSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
+ +++ F+ I +V E G LF+ + + F + +L +VAY
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYC 122
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
H L + H DLKPEN L ++ S +KLIDFG A
Sbjct: 123 HKLNVAHRDLKPENFLFLTDS---------------------PDSPLKLIDFGLAARFKP 161
Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
+ + V T +Y +P+V+ GL + CD WS G ++ L G F + E + +
Sbjct: 162 GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
Query: 304 RALGPLPEHMIRRASRGTEKYFRR 327
PE S E RR
Sbjct: 221 EGTFTFPEKDWLNVSPQAESLIRR 244
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSCH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 159 APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 34/269 (12%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
++ Y + + +G G++G V + T+ R A K+ + + D EI++++ L
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-- 80
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
+ +++ F+ I +V E G LF+ + + F + +L
Sbjct: 81 ----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLS 134
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+VAY H L + H DLKPEN L ++ S +KLIDFG
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDS---------------------PDSPLKLIDFGLA 173
Query: 241 A--FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
A + + V T +Y +P+V+ GL + CD WS G ++ L G F + E
Sbjct: 174 ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRR 327
+ + PE S E RR
Sbjct: 233 MLKIREGTFTFPEKDWLNVSPQAESLIRR 261
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDA--AMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + + K ++ + E +LQ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
V++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 99 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY I++ DFG
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IQVTDFGLAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 28/251 (11%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ I +G+G FG V +RQ++ +A+KV+ + + A +E + + +
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ +++ +F + ++ E P + + K F + +L +++Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
R+IH D+KPEN+LL S+GE+ K+ DFG S +
Sbjct: 131 KRVIHRDIKPENLLL-------------GSNGEL-----------KIADFGWSVHAPSSR 166
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
++ T Y PE+I G D+WS+G + E G F+ H E + R
Sbjct: 167 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 307 GPLPEHMIRRA 317
P+ + A
Sbjct: 227 FTFPDFVTEGA 237
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ ++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 159 APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY+++ +G G FG D+Q+ E VA+K + K I+ +V + + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
+ V+ + H+ IV E G LF+ + C F D R F +QL+ V
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLP----GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+Y H +++ H DLK EN LL S +L GY +SS PKS+
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV----LHSQPKST-------- 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 ------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
++I+ +G G FG V + T+ A+K++ + A E DVL +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
G + F NH+ +V + +G L L + + P D+ R + +++ ++
Sbjct: 131 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAI 188
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H L +H D+KP+N+LL + I+L + S +K+ D G+
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADF---------------GSCLKMNDDGTV-- 231
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
S V T Y +PE++ G+G P CD WS+G + E+ GE F +E
Sbjct: 232 ---QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
++I+ +G G FG V + T+ A+K++ + A E DVL +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 146
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
G + F NH+ +V + +G L L + + P D+ R + +++ ++
Sbjct: 147 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAI 204
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H L +H D+KP+N+LL + I+L + S +K+ D G+
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADF---------------GSCLKMNDDGTV-- 247
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
S V T Y +PE++ G+G P CD WS+G + E+ GE F +E
Sbjct: 248 ---QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
+++ + +G G+FGRV+ +T A+K++ + K + + E +LQ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
++ F +++ +V E G +F L+R F R + Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
Y+H L LI+ DLKPEN++ I GY IK+ DFG
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+IL G++ D W++G ++ E+ G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY + +G G FG D+ T+E VA+K + A I+ +V + + +
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER------GAAIDENVQREIINHRSLR 74
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
+ V+ + H+ I+ E G L++ + F D R F +QLL V+Y
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYC 132
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAF 242
H +++ H DLK EN LL S +L K+ DFG S+
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKSSVL 170
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHE 294
+Q S+ V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 171 HSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + G+R
Sbjct: 218 ISRVEFTFPD------------FVTEGAR------------------------------- 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 235 -------DLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ +L +G G++ +VL ++T A+KVV+ D + + +H+ + S
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 78
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+H V + + F + + V E + G L ++R + P + R + ++ ++ Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 136
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H+ +I+ DLK +N+LL S IKL Y G P G T
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 178
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
S T +Y APE++ G + + D W++G ++ E+ G + F
Sbjct: 179 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 45/249 (18%)
Query: 69 KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
K+ K+G G FG V + +++ T +VA+K ++ +A + E +V++ L ++DK
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 241
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H V + I I+ E + SL DFLK ++ P+ + +F Q+ E +A++
Sbjct: 242 LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG-EMPFRCLPKSSAIKLIDFGSTAFDNQ 245
IH DL+ NIL+ +S K+ + + G + P K +A + I+FGS
Sbjct: 296 QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI----KWTAPEAINFGS------ 345
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMER 304
++ D+WS G +L+E+ T G + N E + +ER
Sbjct: 346 ---------------------FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
Query: 305 AL-GPLPEH 312
P PE+
Sbjct: 385 GYRMPRPEN 393
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN++ I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLI------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y APE+I+ G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ +L +G G++ +VL ++T A+KVV+ D + + +H+ + S
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 63
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+H V + + F + + V E + G L ++R + P + R + ++ ++ Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H+ +I+ DLK +N+LL S IKL Y G P G T
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 163
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
S T +Y APE++ G + + D W++G ++ E+ G + F
Sbjct: 164 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ +L +G G++ +VL ++T A+KVV+ D + + +H+ + S
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 67
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+H V + + F + + V E + G L ++R + P + R + ++ ++ Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H+ +I+ DLK +N+LL S IKL Y G P G T
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 167
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
S T +Y APE++ G + + D W++G ++ E+ G + F
Sbjct: 168 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 79/343 (23%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+N +Y++L G+G FG V C R T + A K + R + E L
Sbjct: 183 KNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKQI 237
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDF-LKRNKYCPFPVDLVREFGRQLLE 180
+K S V + ++ ++ +C+V + F + FP + ++
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ +H R+++ DLKPENILL I++ + +P+ IK
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH-------VPEGQTIK------- 343
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
V T Y APEV+ +++ D W++GC+L E+ G++ FQ +
Sbjct: 344 --------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ER + +PE R S
Sbjct: 396 EVERLVKEVPEEYSERFS------------------------------------------ 413
Query: 361 DRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
+ARS L LL DP+ERL +AR+ HP F+ LN
Sbjct: 414 PQARS----LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y K+G+G G V D T + VAI+ + ++ + +I ++ KN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
I N+ D + + +V E L G SL D + C + R+ L+++
Sbjct: 78 -----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H ++IH D+K +NILL ++KL DFG A
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ S++V T ++ APEV+ + D+WS+G + +E+ GE + L L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
++
Sbjct: 226 YLI 228
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 88
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 148 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 183
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 244 ISRVEFTFPDFVT--------------------EGA------------------------ 259
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 260 ------RDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ +L +G G++ +VL ++T A++VV+ D + + +H+ + S
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ---AS 110
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
+H V + + F + + V E + G L ++R + P + R + ++ ++ Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 168
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H+ +I+ DLK +N+LL S IKL Y G P G T
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 210
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
S+ T +Y APE++ G + + D W++G ++ E+ G + F
Sbjct: 211 ---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 79/343 (23%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+N +Y++L G+G FG V C R T + A K + R + E L
Sbjct: 183 KNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKQI 237
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDF-LKRNKYCPFPVDLVREFGRQLLE 180
+K S V + ++ ++ +C+V + F + FP + ++
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ +H R+++ DLKPENILL I++ + +P+ IK
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH-------VPEGQTIK------- 343
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
V T Y APEV+ +++ D W++GC+L E+ G++ FQ +
Sbjct: 344 --------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
+ER + +PE R S
Sbjct: 396 EVERLVKEVPEEYSERFS------------------------------------------ 413
Query: 361 DRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
+ARS L LL DP+ERL +AR+ HP F+ LN
Sbjct: 414 PQARS----LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 APSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 64
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 124 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 159
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 160 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 220 ISRVEFTFPDFVT--------------------EGA------------------------ 235
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 236 ------RDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 70 ILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKNDK 124
IL KM G+G+FG+V ++T + AIK ++ D M+E VL ++
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVA 183
C F + ++ V E L D + + C F + + +++ +
Sbjct: 80 LTHMFCT-----FQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---ST 240
++H +++ DLK +NILL K IK+ DFG
Sbjct: 133 FLHSKGIVYRDLKLDNILL------------------------DKDGHIKIADFGMCKEN 168
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEH 298
+ + T Y APE++LG +++ D WS G +L E+ G++ F Q E L H
Sbjct: 169 MLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 299 LAMMERALGP 308
M+ P
Sbjct: 229 SIRMDNPFYP 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T Y AP +IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 77/346 (22%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+NL KIL G G+ G V+ Q + VA+K R + + D A++EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG-----R 176
+ +C + + F Y I E +L D ++ + L +E+ R
Sbjct: 86 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 177 QLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KL 234
Q+ VA++H L++IH DLKP+NIL+ SS F +G R L + K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCKK 195
Query: 235 IDFGSTAF-DNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALF 290
+D G F N N+ S T +RAPE++ + D++S+GC+ +
Sbjct: 196 LDSGQXXFRXNLNNPS--GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------- 246
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES--IKAVKK 348
L+ + G +KY SRES I+ +
Sbjct: 247 --------LSKGKHPFG--------------DKY--------------SRESNIIRGIFS 270
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
LD +K LH + TDL+ ++ +DP +R TA + L HP F
Sbjct: 271 LDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 77/346 (22%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+NL KIL G G+ G V+ Q + VA+K R + + D A++EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG-----R 176
+ +C + + F Y I E +L D ++ + L +E+ R
Sbjct: 86 HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 177 QLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KL 234
Q+ VA++H L++IH DLKP+NIL+ SS F +G R L + K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCKK 195
Query: 235 IDFGSTAF-DNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALF 290
+D G F N N+ S T +RAPE++ + D++S+GC+ +
Sbjct: 196 LDSGQXXFRXNLNNPS--GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------- 246
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES--IKAVKK 348
L+ + G +KY SRES I+ +
Sbjct: 247 --------LSKGKHPFG--------------DKY--------------SRESNIIRGIFS 270
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
LD +K LH + TDL+ ++ +DP +R TA + L HP F
Sbjct: 271 LDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R A ++ + + N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNH 63
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ V+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 64 ENVVK---FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 145/349 (41%), Gaps = 79/349 (22%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEIDVLQHLA 120
+NL KIL G G+ G V+ + Q R VA+K R + + D A++EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESD 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG----- 175
+ +C + + F Y I E +L D ++ + L +E+
Sbjct: 67 DHPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-K 233
RQ+ VA++H L++IH DLKP+NIL+ SS F +G R L + K
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCK 176
Query: 234 LIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCILVELCT 285
+D G ++F N N+ S T +RAPE++ + D++S+GC+ +
Sbjct: 177 KLDSGQSSFRTNLNNPS--GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL- 233
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
S+G + + SR E + I+
Sbjct: 234 --------------------------------SKGKHPFGDKYSR----ESNI----IRG 253
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ LD +K LH + TDL+ ++ +DP +R TA + L HP F
Sbjct: 254 IFSLDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 64
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ +FG S
Sbjct: 124 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIANFGWSVH 159
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 160 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 220 ISRVEFTFPDFVT--------------------EGA------------------------ 235
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 236 ------RDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y K+G+G G V D T + VAI+ + ++ + +I ++ KN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 78
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
I N+ D + + +V E L G SL D + C + R+ L+++
Sbjct: 79 ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H ++IH D+K +NILL ++KL DFG A
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ S +V T ++ APEV+ + D+WS+G + +E+ GE + L L
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
++
Sbjct: 226 YLI 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ +FG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIANFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 127/332 (38%), Gaps = 88/332 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q + +A+KV+ A +E ++H + +
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 59
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 119 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 154
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 155 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 214
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 215 ISRVEFTFPDFVT--------------------EGA------------------------ 230
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
DL+ LL+++PS+R R+ L HP+
Sbjct: 231 ------RDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 126/332 (37%), Gaps = 88/332 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 158 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y K+G+G G V D T + VAI+ + ++ + +I ++ KN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 78
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
I N+ D + + +V E L G SL D + C + R+ L+++
Sbjct: 79 ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H ++IH D+K +NILL ++KL DFG A
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ S +V T ++ APEV+ + D+WS+G + +E+ GE + L L
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
++
Sbjct: 226 YLI 228
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 126/332 (37%), Gaps = 88/332 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++Q++ +A+KV+ A +E ++H + +
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H R+IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
DL+ LL+++PS+R R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ I+ +G+G FG V ++Q + +A+KV+ + +E + ++H + +
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK-------SQLEKEGVEHQLRREIEIQ 68
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ N+F R I ++ E P + + K+ F F +L +++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
Y H+ ++IH D+KPEN+L+ GYK GE+ K+ DFG S
Sbjct: 128 HYCHERKVIHRDIKPENLLM---------GYK----GEL-----------KIADFGWSVH 163
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + T Y PE+I G D+W G + E G F + + E
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 369 DLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ LLRY P +RL + + HP+ +
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y K+G+G G V D T + VAI+ + ++ + +I ++ KN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 79
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
I N+ D + + +V E L G SL D + C + R+ L+++
Sbjct: 80 ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H ++IH D+K +NILL ++KL DFG A
Sbjct: 131 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 166
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ S +V T ++ APEV+ + D+WS+G + +E+ GE + L L
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 300 AMM 302
++
Sbjct: 227 YLI 229
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 63
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 64 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 118 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 153
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-CLLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+S V T Y +PE++ S D+W++GCI+ +L G
Sbjct: 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
+++ +G+G+FG+V ++T + AIK ++ D M+E VL ++
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESV 182
C F + ++ V E L D + + C F + + +++ +
Sbjct: 80 FLTHMFCT-----FQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
++H +++ DLK +NILL K IK+ DFG
Sbjct: 133 QFLHSKGIVYRDLKLDNILL------------------------DKDGHIKIADFGMCKE 168
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
+ + T Y APE++LG +++ D WS G +L E+ G++ F Q E L
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 298 HLAMMERALGP 308
H M+ P
Sbjct: 229 HSIRMDNPFYP 239
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 81/325 (24%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+GEG+ G V R + + VA+K + ++ R + V+ +++ + V+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVE 81
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ N + + + +V E L G +L D + + + + +L++++ +H +I
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVI 138
Query: 192 HTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS 249
H D+K ++ILL +KL G+ S E+P R
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-----------------------KX 175
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
+V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234
Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
RLKN LH + +L
Sbjct: 235 -----------------------------------------RLKN---LH--KVSPSLKG 248
Query: 370 LLHGLLRYDPSERLTARQALNHPFF 394
L LL DP++R TA + L HPF
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY+++ +G G FG D+Q+ E VA+K + K I+ +V + + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
+ V+ + H+ IV E G LF+ + C F D R F +QL+ V
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLP----GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+Y H +++ H DLK EN LL S +L GY +SS PK +
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV----LHSQPKDT-------- 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHE 294
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 ------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 81/325 (24%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+GEG+ G V R + + VA+K + ++ R + V+ +++ + V+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVE 85
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ N + + + +V E L G +L D + + + + +L++++ +H +I
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVI 142
Query: 192 HTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS 249
H D+K ++ILL +KL G+ S E+P R
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-----------------------KX 179
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
+V T ++ APE+I L + D+WS+G +++E+ GE + L+ + M+ L P
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 238
Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
RLKN LH + +L
Sbjct: 239 -----------------------------------------RLKN---LH--KVSPSLKG 252
Query: 370 LLHGLLRYDPSERLTARQALNHPFF 394
L LL DP++R TA + L HPF
Sbjct: 253 FLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
++ +G+G FG+V++ + AIK +R + + E+ +L L +H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
+R W + RN + +F ++ +L+D + + R F
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
RQ+LE+++Y+H +IH DLKP NI + S +K+ + + + + +S I
Sbjct: 123 -RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC 284
+D + + N +S + T Y A EV+ G G ++ DM+S+G I E+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
+ +G G+FGRV+ +++ A+K++ + K + + E +LQ +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
V++ F +++ +V E + G +F L+R F R + Q++ + Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H L LI+ DLKPEN+L I GY I++ DFG
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ T APE+IL G++ D W++G ++ E+ G
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 66 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG +G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 38/253 (15%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
L +MG GT G+V + R+T +A+K +R + I +D+ L +D +
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD---CPYI 86
Query: 131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR- 189
VQ F + I E +G + + LK+ P P ++ + +++++ Y+ +
Sbjct: 87 VQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG 145
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQNH 247
+IH D+KP NILL + IKL DFG + D++
Sbjct: 146 VIHRDVKPSNILL------------------------DERGQIKLCDFGISGRLVDDKAK 181
Query: 248 SSIVSTRHYRAPEVILGLGWSYP-----CDMWSVGCILVELCTGEALFQT-HENLEHLAM 301
Y APE I + P D+WS+G LVEL TG+ ++ + E L
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 302 MERALGP-LPEHM 313
+ + P LP HM
Sbjct: 242 VLQEEPPLLPGHM 254
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
++ +G+G FG+V++ + AIK +R + + E+ +L L +H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
+R W + RN + +F ++ +L+D + + R F
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
RQ+LE+++Y+H +IH DLKP NI + S +K+ + + + + +S I
Sbjct: 123 -RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC 284
+D + + N +S + T Y A EV+ G G ++ DM+S+G I E+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 73/289 (25%)
Query: 36 TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
TAAA +H+ P DDD + N ++ R Y IL ++G G +V + + +
Sbjct: 20 TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90 TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
Q AIK V +++ YR+ EI L L + H +I +DY
Sbjct: 80 KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
+I +V E L +LK+ K P+ + + + +LE+V +H ++H+DLKP
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI-----VST 253
N L+V +KLIDFG + +S+ V T
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 254 RHYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
+Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAK 121
T Y++ ++G+G F V C + A ++ + + RD +E + + L K
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLL 179
+ + V++ + H ++F+ + G LF D + R Y + Q+L
Sbjct: 69 H-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QIL 120
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
E+V + H + ++H +LKPEN+LL S KL G +A+KL DFG
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLAS----KLKG-----------------AAVKLADFGL 159
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ Q T Y +PEV+ + P D+W+ G IL L G F
Sbjct: 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
D DL++ +L +PS+R+TA +AL HP+
Sbjct: 238 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y K+G+G G V D T + VAI+ + ++ + +I ++ KN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 79
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
I N+ D + + +V E L G SL D + C + R+ L+++
Sbjct: 80 ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H ++IH ++K +NILL ++KL DFG A
Sbjct: 131 EFLHSNQVIHRNIKSDNILL------------------------GMDGSVKLTDFGFCAQ 166
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
+ S++V T ++ APEV+ + D+WS+G + +E+ GE + L L
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 300 AMM 302
++
Sbjct: 227 YLI 229
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 143/349 (40%), Gaps = 79/349 (22%)
Query: 62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEIDVLQHLA 120
+NL KIL G G+ G V+ + Q R VA+K R + + D A++EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESD 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG----- 175
+ +C + + F Y I E +L D ++ + L +E+
Sbjct: 67 DHPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-K 233
RQ+ VA++H L++IH DLKP+NIL+ SS F +G R L + K
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCK 176
Query: 234 LIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCILVELCT 285
+D G F N N+ S T +RAPE++ + D++S+GC+ +
Sbjct: 177 KLDSGQXXFRXNLNNPS--GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL- 233
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
S+G + + SR E + I+
Sbjct: 234 --------------------------------SKGKHPFGDKYSR----ESNI----IRG 253
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ LD +K LH + TDL+ ++ +DP +R TA + L HP F
Sbjct: 254 IFSLDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 73/289 (25%)
Query: 36 TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
TAAA +H+ P DDD + N ++ R Y IL ++G G +V + + +
Sbjct: 20 TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90 TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
Q AIK V +++ YR+ EI L L + H +I +DY
Sbjct: 80 KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
+I +V E L +LK+ K P+ + + + +LE+V +H ++H+DLKP
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI-----VST 253
N L+V +KLIDFG + +S+ V T
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 254 RHYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
+Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 91 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 143
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 144 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 179
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+S V T Y +PE++ D+W++GCI+ +L G
Sbjct: 180 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 29/182 (15%)
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
L K G S +++ +WF+ + ++ E+ P LFDF+ +L R F
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+LE+V + H+ ++H D+K ENIL+ + GE+ KLID
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 201
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
FGS A + ++ TR Y PE I + +WS+G +L ++ G+ F+ E
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 295 NL 296
+
Sbjct: 262 EI 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ I +G+G FG V ++Q + +A+KV+ + +E + ++H + +
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK-------SQLEKEGVEHQLRREIEIQ 69
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ N+F R I ++ E P + + K+ F F +L +++
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
Y H+ ++IH D+KPEN+L+ GYK GE+ K+ DFG S
Sbjct: 129 HYCHERKVIHRDIKPENLLM---------GYK----GEL-----------KIADFGWSVH 164
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + T Y PE+I G D+W G + E G F + + E
Sbjct: 165 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 369 DLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ LLRY P +RL + + HP+ +
Sbjct: 242 DLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ I +G+G FG V ++Q + +A+KV+ + +E + ++H + +
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK-------SQLEKEGVEHQLRREIEIQ 68
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ N+F R I ++ E P + + K+ F F +L +++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
Y H+ ++IH D+KPEN+L+ GYK GE+ K+ DFG S
Sbjct: 128 HYCHERKVIHRDIKPENLLM---------GYK----GEL-----------KIADFGWSVH 163
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
+ + T Y PE+I G D+W G + E G F + + E
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 369 DLLHGLLRYDPSERLTARQALNHPFFR 395
DL+ LLRY P +RL + + HP+ +
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 53/238 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKG 125
+++ ++G G FG VL + T E+VAIK R K R+ +EI +++ L
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL------ 70
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN--------KY-------CPFPVDL 170
+ V R D +KL P+ L KY C
Sbjct: 71 NHPNVVSAREVPDG-------LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 123
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++ Y+H+ R+IH DLKPENI+L PG P+
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ-------PG--------------PQRL 162
Query: 231 AIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
K+ID G +Q + V T Y APE++ ++ D WS G + E TG
Sbjct: 163 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 53/238 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKG 125
+++ ++G G FG VL + T E+VAIK R K R+ +EI +++ L
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL------ 69
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN--------KY-------CPFPVDL 170
+ V R D +KL P+ L KY C
Sbjct: 70 NHPNVVSAREVPDG-------LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+R + ++ Y+H+ R+IH DLKPENI+L PG P+
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ-------PG--------------PQRL 161
Query: 231 AIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
K+ID G +Q + V T Y APE++ ++ D WS G + E TG
Sbjct: 162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 43/230 (18%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ ++ +GEG G V +R T+E VA+K+V R I+ ++ + N +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ ++ +R I + L G LFD ++ + P P + F QL+ V
Sbjct: 65 ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
Y+H + + H D+KPEN+L L + +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
N +++ T Y APE++ + + P D+WS G +L + GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
A + + PE +A EK
Sbjct: 239 EGLIFAKIIKLEYDFPEKFFPKARDLVEK 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 137/344 (39%), Gaps = 84/344 (24%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y++ +G G V + +E+VAIK + ++ K + +M E+ L+ + +
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDEL--LKEIQAMSQCHH 72
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK------RNKYCPFPVDLVREFGRQLLE 180
+ V F ++ + +V + L G S+ D +K +K + R++LE
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ Y+H IH D+K NILL GE ++++ DFG +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILL----------------GE--------DGSVQIADFGVS 168
Query: 241 AF--------DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ 291
AF N+ + V T + APEV+ + G+ + D+WS G +EL TG A +
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ ++ L + + P E G +E +K K
Sbjct: 229 KYPPMKVLMLTLQNDPPSLE-----------------------TGVQDKEMLKKYGK--S 263
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
+ M+SL L+ DP +R TA + L H FF+
Sbjct: 264 FRKMISL---------------CLQKDPEKRPTAAELLRHKFFQ 292
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
Y+++ +G G FG V + T++ A+K++ K D+A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
S VQ+ F ++ +V E + G L + + P R + +++ ++
Sbjct: 131 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 186
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H + IH D+KP+N+L L KS +KL DFG+
Sbjct: 187 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 222
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
N+ + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 137/345 (39%), Gaps = 84/345 (24%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
Y++ +G G V + +E+VAIK + ++ K + +M E+ L+ + +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDEL--LKEIQAMSQCHH 67
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK------RNKYCPFPVDLVREFGRQLLE 180
+ V F ++ + +V + L G S+ D +K +K + R++LE
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
+ Y+H IH D+K NILL GE ++++ DFG +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILL----------------GE--------DGSVQIADFGVS 163
Query: 241 AF--------DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ 291
AF N+ + V T + APEV+ + G+ + D+WS G +EL TG A +
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
+ ++ L + + P E G +E +K K
Sbjct: 224 KYPPMKVLMLTLQNDPPSLE-----------------------TGVQDKEMLKKYGK--S 258
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ M+SL L+ DP +R TA + L H FF+
Sbjct: 259 FRKMISL---------------CLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 87 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 140 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 175
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+S V T Y +PE++ D+W++GCI+ +L G
Sbjct: 176 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
Y+++ +G G FG V + T++ A+K++ K D+A E D++
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 125
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
S VQ+ F ++ +V E + G L + + P R + +++ ++
Sbjct: 126 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 181
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H + IH D+KP+N+L L KS +KL DFG+
Sbjct: 182 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 217
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
N+ + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
A + + PE +A EK
Sbjct: 239 EGLIFAKIIKLEYDFPEKFFPKARDLVEK 267
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 73/289 (25%)
Query: 36 TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
TAAA +H+ P DDD + N ++ R Y IL ++G G +V + + +
Sbjct: 20 TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90 TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
Q AIK V +++ YR+ EI L L + H +I +DY
Sbjct: 80 KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
+I +V E L +LK+ K P+ + + + +LE+V +H ++H+DLKP
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR---- 254
N L+V +KLIDFG + +S+V
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 255 -HYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
+Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 88 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
++ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 177 AKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
Y+++ +G G FG V + T++ A+K++ K D+A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
S VQ+ F ++ +V E + G L + + P R + +++ ++
Sbjct: 131 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 186
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H + IH D+KP+N+L L KS +KL DFG+
Sbjct: 187 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 222
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
N+ + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++ ++ +A+KV+ A +E ++H + +
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
SH +++ +F + ++ E P + + K F + +L ++
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
+Y H ++IH D+KPEN+LL S+GE+ K+ DFG S
Sbjct: 122 SYCHSKKVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ +++ T Y PE+I G D+WS+G + E G+ F+ + +
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
+ R P+ + EGA
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
DL+ LL+++PS+R R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 92
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 93 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 145
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 146 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 181
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 182 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 103/336 (30%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVL---QHLAKNDKGGS 127
K+GEG+ G V ++ + +VA+K++ +RK R+ E+ ++ QH
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHF-------- 102
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ V++ + + ++ E L G +L D + + + + V E +L+++AY+H
Sbjct: 103 -NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLH 158
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---D 243
+IH D+K ++ILL L G +KL DFG A D
Sbjct: 159 AQGVIHRDIKSDSILLT------LDG------------------RVKLSDFGFCAQISKD 194
Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
+V T ++ APEVI ++ D+WS+G +++E+ GE
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP--------------- 239
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL-----DRLKNMVSL 358
YF S ++A+K+L +LKN
Sbjct: 240 -------------------PYF-------------SDSPVQAMKRLRDSPPPKLKNS--- 264
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
+ L D L +L DP ER TA++ L+HPF
Sbjct: 265 --HKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 91 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 143
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 144 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 179
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 180 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 88 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 90 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 100/245 (40%), Gaps = 52/245 (21%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
GHY+ LG+ L G GTFG+V T +VA+K++ + IR I
Sbjct: 16 GHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 63
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
EI L+ H +++ + I +V E + G LFD++ +N
Sbjct: 64 RREIQNLKLFR------HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDE 115
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
R +Q+L V Y H ++H DLKPEN+LL +
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA------------------------ 151
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCT 285
K+ DFG + D + + +Y APEVI G ++ P D+WS G IL L
Sbjct: 152 HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
Query: 286 GEALF 290
G F
Sbjct: 212 GTLPF 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 88 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 54/250 (21%)
Query: 53 EGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAM 110
E H+ F E+L K L ++G G +G V + + + + +A+K +RS K + +
Sbjct: 14 EQHWDFT-AEDL----KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLL 68
Query: 111 IEIDVLQHLAKNDKGGSSHCVQIRNWFD--YRNHICIVFEKLGPSLFDFLKRNKYCPFPV 168
+++DV+ SS C I ++ +R C + +L + FD + Y
Sbjct: 69 MDLDVVMR--------SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLD- 119
Query: 169 DLVRE--FGRQLLESVAYMH----DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
D++ E G+ L +V ++ +L++IH D+KP NIL
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNIL--------------------- 158
Query: 223 FRCLPKSSAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILG----LGWSYPCDMWSV 276
L +S IKL DFG + D+ + R Y APE I G+ D+WS+
Sbjct: 159 ---LDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215
Query: 277 GCILVELCTG 286
G L EL TG
Sbjct: 216 GITLYELATG 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
Y IL ++G G +V + + + Q AIK V +++ YR+ EI L L
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
+ H +I +DY +I +V E L +LK+ K P+ + + +
Sbjct: 66 Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 115
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
+LE+V +H ++H+DLKP N L+V +KLID
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 150
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
FG + +S+ V T +Y PE I + S D+WS+GCIL
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
Query: 281 VELCTGEALFQ 291
+ G+ FQ
Sbjct: 211 YYMTYGKTPFQ 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
+GE ++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 62 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
S + V F I I E + G SL LK+ P ++ +
Sbjct: 122 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 173
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+++ + Y+ + +++H D+KP NIL+ +S GE IKL
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 209
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
DFG S + +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 210 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 74/277 (26%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAK 121
L +Y + +G+G++G V + QT+ AIK++ IR+ + I L K
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK---------------RNKYCP 165
K + ++ ++ +IC+V E G L D L + + CP
Sbjct: 84 --KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 166 FPV-----------------------DLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
P L+ RQ+ ++ Y+H+ + H D+KPEN L
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNH------SSIVSTRH 255
++ KS IKL+DFG S F N+ ++ T +
Sbjct: 202 STN----------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 256 YRAPEVILGLGWSY--PCDMWSVGCILVELCTGEALF 290
+ APEV+ SY CD WS G +L L G F
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 66
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 67 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 119
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 120 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 155
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 156 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
+ + PE +A EK
Sbjct: 216 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 244
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 67
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 68 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 120
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 121 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 156
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 157 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
+ + PE +A EK
Sbjct: 217 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
+GE ++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 86
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
S + V F I I E + G SL LK K P ++ +
Sbjct: 87 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 138
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+++ + Y+ + +++H D+KP NIL+ +S GE IKL
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 174
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
DFG S + +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 175 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 65
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 66 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 118
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 119 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 154
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 155 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
+ + PE +A EK
Sbjct: 215 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 243
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 64
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 65 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 117
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 118 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 153
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ V T Y +PE++ D+W++GCI+ +L G F+
Sbjct: 154 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
+ + PE +A EK
Sbjct: 214 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 242
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 88/334 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++I +G+G FG V ++++ VA+KV+ + IE + ++H + +
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK-------SQIEKEGVEHQLRREIEIQ 77
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
+H +++ N+F R I ++ E P + + K C F +L +++
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILE-YAPRGELYKELQKSCTFDEQRTATIMEELADAL 136
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
Y H ++IH D+KPEN+LL +K+ DFG S
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGL------------------------KGELKIADFGWSVH 172
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
+ ++ T Y PE+I G + D+W +G + EL G F
Sbjct: 173 APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF----------- 221
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
E A E+ + + K+D LK S+
Sbjct: 222 ---------------------------------ESASHNETYRRIVKVD-LKFPASV--- 244
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
+ DL+ LLR++PSERL Q HP+ R
Sbjct: 245 --PTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
Y IL ++G G +V + + + Q AIK V +++ YR+ EI L L
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
+ H +I +DY +I +V E L +LK+ K P+ + + +
Sbjct: 85 Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 134
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
+LE+V +H ++H+DLKP N L+V +KLID
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 169
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
FG + +S+ V T +Y PE I + S D+WS+GCIL
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 281 VELCTGEALFQ 291
+ G+ FQ
Sbjct: 230 YYMTYGKTPFQ 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 87 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 140 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 175
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 176 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 71
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 72 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 125 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 160
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 161 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
LGE ++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 3 LGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
S + V F I I E + G SL LK K P ++ +
Sbjct: 63 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 114
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+++ + Y+ + +++H D+KP NIL+ +S GE IKL
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 150
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
DFG S ++ + V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 151 DFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
Y IL ++G G +V + + + Q AIK V +++ YR+ EI L L
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
+ H +I +DY +I +V E L +LK+ K P+ + + +
Sbjct: 65 Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 114
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
+LE+V +H ++H+DLKP N L+V +KLID
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 149
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
FG + +S+ V T +Y PE I + S D+WS+GCIL
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
Query: 281 VELCTGEALFQ 291
+ G+ FQ
Sbjct: 210 YYMTYGKTPFQ 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
Y IL ++G G +V + + + Q AIK V +++ YR+ EI L L
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
+ H +I +DY +I +V E L +LK+ K P+ + + +
Sbjct: 69 Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 118
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
+LE+V +H ++H+DLKP N L+V +KLID
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 153
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
FG + +S+ V T +Y PE I + S D+WS+GCIL
Sbjct: 154 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
Query: 281 VELCTGEALFQ 291
+ G+ FQ
Sbjct: 214 YYMTYGKTPFQ 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
L ++G G+FG V D + E VAIK + +S K++D + E+ LQ L
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRH---- 113
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
+ +Q R + + +V E S D L+ +K P + L+ +AY+
Sbjct: 114 --PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYL 170
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H +IH D+K NILL PG +KL DFGS +
Sbjct: 171 HSHNMIHRDVKAGNILLSE------PGL------------------VKLGDFGSASI-MA 205
Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELC 284
+ V T ++ APEVIL + + D+WS+G +EL
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
++G G+FG V D+QT + A+K VR + +R ++ L S V
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLT---------SPRIVP 130
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
+ + I E L L + + C P D + Q LE + Y+H R++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--------DN 244
D+K +N+LL S S L DFG D
Sbjct: 190 GDVKADNVLLSSD-----------------------GSHAALCDFGHAVCLQPDGLGKDL 226
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
I T + APEV+LG D+WS C+++ + G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 48/271 (17%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
GHYV LG+ L G GTFG+V + T +VA+K++ + IR I
Sbjct: 11 GHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 58
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
+ ++ Q+L H +++ +V E + G LFD++ K+
Sbjct: 59 KREI-QNLKLFR---HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEME 112
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
R +Q+L +V Y H ++H DLKPEN+LL +
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA------------------------HM 148
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGE 287
K+ DFG + D + + + +Y APEVI G ++ P D+WS G IL L G
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRAS 318
F + + +PE++ R +
Sbjct: 209 LPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA 239
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
+GE ++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 19 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
S + V F I I E + G SL LK K P ++ +
Sbjct: 79 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 130
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
+++ + Y+ + +++H D+KP NIL+ +S GE IKL
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 166
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
DFG S + +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 167 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F V+ + T AIK++ R I K + E DV+ L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 94
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 95 ----DHPFFVKLYFCFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 147
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 148 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 183
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 184 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
L ++G G+FG V D + E VAIK + +S K++D + E+ LQ L
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRH---- 74
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
+ +Q R + + +V E S D L+ +K P + L+ +AY+
Sbjct: 75 --PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYL 131
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H +IH D+K NILL PG +KL DFGS +
Sbjct: 132 HSHNMIHRDVKAGNILLSE------PGL------------------VKLGDFGSASI-MA 166
Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELC 284
+ V T ++ APEVIL + + D+WS+G +EL
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
+K +GEG+F + + T AIK++ R I K + E DV+ L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
H ++ +F +++ + + + K G L +++ K F R + +++
Sbjct: 88 ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++ Y+H +IH DLKPENIL L + I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ V T Y +PE++ D+W++GCI+ +L G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
++++ K+G G+FG + + QT E VAIK+ +++ + E + + L G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRILQ-----G 61
Query: 127 SSHCVQIRNWFDYR-NHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESVA 183
+ +R WF ++ +V + LGPSL D +C + L V Q++ V
Sbjct: 62 GTGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLFN---FCSRKLSLKTVLMLADQMINRVE 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
++H +H D+KP+N L+ G R +++ + +IDFG
Sbjct: 118 FVHSKSFLHRDIKPDNFLM---------GLGR------------RANQVYIIDFGLAKKY 156
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
D H I T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 84/339 (24%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAK 121
L +Y I +G G FG V C + +++ K V+ K D ++ EI +L ++A+
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV--KGTDQVLVKKEISIL-NIAR 59
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLL 179
+ + + + F+ + ++FE + S D +R F ++ + + Q+
Sbjct: 60 H-----RNILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVC 112
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E++ ++H + H D++PENI+ + +SS IK+I+FG
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQTR----------------------RSSTIKIIEFGQ 150
Query: 240 T--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
N + + Y APEV S DMWS+G ++ L +G F N +
Sbjct: 151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
++E + + + E A SI+A+ +DR
Sbjct: 211 ---IIENIM---------------------NAEYTFDEEAFKEISIEAMDFVDR------ 240
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
LL + R+TA +AL HP+ +
Sbjct: 241 ----------------LLVKERKSRMTASEALQHPWLKQ 263
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
++IL +G G FG V + + A+K++ + A E DVL +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
G S + F N++ +V + +G L L + + P ++ R + +++ ++
Sbjct: 131 -GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAI 188
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H L +H D+KP+NIL+ + I+L + S +KL++ G+
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF---------------GSCLKLMEDGTV-- 231
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
S V T Y +PE++ G G P CD WS+G + E+ GE F +E
Sbjct: 232 ---QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
S + V F I I E + G SL LK+ P ++ + +++ + Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
+ + +++H D+KP NIL+ +S GE IKL DFG S
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 56/247 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T VAIK++ S++K +R+ +++I L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 70
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + ++ E G +FD+L + R RQ+
Sbjct: 71 --------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQI 120
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H R++H DLK EN+LL + IK+ DFG
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDA------------------------DMNIKIADFG 156
Query: 239 STAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQT 292
F N+ + + Y APE+ G + P D+WS+G IL L +G F
Sbjct: 157 ---FSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
Query: 293 HENLEHL 299
+NL+ L
Sbjct: 214 -QNLKEL 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 52/273 (19%)
Query: 54 GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEI 113
GHYV LG+ L G GTFG+V + T +VA+K++ +K R +
Sbjct: 11 GHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNR-QKIR-----SL 52
Query: 114 DVLQHLAKNDKGGS----SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
DV+ + + + H +++ +V E + G LFD++ K+
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEE 110
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
R +Q+L +V Y H ++H DLKPEN+LL +
Sbjct: 111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA------------------------ 146
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCT 285
K+ DFG + D + + +Y APEVI G ++ P D+WS G IL L
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRAS 318
G F + + +PE++ R +
Sbjct: 207 GTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
++G G+FG V D+QT + A+K VR + +R ++ L S V
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLT---------SPRIVP 149
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
+ + I E L L + + C P D + Q LE + Y+H R++H
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS- 248
D+K +N+LL S S L DFG D S
Sbjct: 209 GDVKADNVLLSSD-----------------------GSHAALCDFGHAVCLQPDGLGKSL 245
Query: 249 ----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
I T + APEV+LG D+WS C+++ + G
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
S + V F I I E + G SL LK+ P ++ + +++ + Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
+ + +++H D+KP NIL+ +S GE IKL DFG S
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
S + V F I I E + G SL LK+ P ++ + +++ + Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
+ + +++H D+KP NIL+ +S GE IKL DFG S
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 69 KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKN 122
K + +GEG FG+V L C+D T E VA+K +++ ++R EID+L+ L
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
C + + + + + LG SL D+L R+ + + F +Q+ E +
Sbjct: 94 HIIKYKGCCEDAGAASLQ--LVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
AY+H IH DL N+LL + +K+ + + + +P+ + D S
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA-------KAVPEGHEXYRVREDGDSP 200
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
F + APE + + Y D+WS G L EL T
Sbjct: 201 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 46/283 (16%)
Query: 68 YKILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRS---IRKYRDAAMI--EIDVLQHL 119
+++L +G+G +G+V + T + A+KV++ +R +D A E ++L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
V + F + ++ E L G LF L+R F D + ++
Sbjct: 79 K------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++ ++H +I+ DLKPENI+L +KL DFG
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIML------------------------NHQGHVKLTDFG 166
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
+ D + T Y APE+++ G + D WS+G ++ ++ TG F
Sbjct: 167 LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEG 336
+ + + + LP ++ + A +K +R SRL G
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPG 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA+K++ S++K +R+ +++ VL H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 65
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + + R RQ+
Sbjct: 66 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQI 115
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 151
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 152 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 210
Query: 296 LEHL 299
L+ L
Sbjct: 211 LKEL 214
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
Y ++ +G G FG V + +Q+ A+K++ K D+A E D++
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 131
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
S VQ+ F ++ +V E + G L + + P + + +++ ++
Sbjct: 132 -ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLAL 187
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
+H + LIH D+KP+N+L L K +KL DFG+
Sbjct: 188 DAIHSMGLIHRDVKPDNML------------------------LDKHGHLKLADFGTCMK 223
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
++ + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 224 MDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
S + V F I I E + G SL LK+ P ++ + +++ + Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
+ + +++H D+KP NIL+ +S GE IKL DFG S
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
++ +S++G G G V + + + +A K++ K R+ + E+ VL
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
S + V F I I E + G SL LK+ P ++ + +++ + Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
+ + +++H D+KP NIL+ +S GE IKL DFG S
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ +S V TR Y +PE + G +S D+WS+G LVE+ G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
++ +G+G FG+V++ + AIK +R + + E+ +L L +H
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
+R W + RN + +F + +L+D + + R F
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
RQ+LE+++Y+H +IH +LKP NI + S +K+ + + + + +S I
Sbjct: 123 -RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVE 282
+D + + N +S + T Y A EV+ G G ++ D +S+G I E
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 102/254 (40%), Gaps = 73/254 (28%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
Y IL ++G G +V + + + Q AIK V +++ YR+ EI L L
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
+ H +I +DY +I +V E L +LK+ K P+ + + +
Sbjct: 85 Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 134
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
+LE+V +H ++H+DLKP N L+V +KLID
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 169
Query: 237 FGSTAFDNQNH--------SSIVSTRHYRAPEVILGLGWS-----------YPCDMWSVG 277
FG NQ S V T +Y PE I + S D+WS+G
Sbjct: 170 FG---IANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 278 CILVELCTGEALFQ 291
CIL + G+ FQ
Sbjct: 227 CILYYMTYGKTPFQ 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA+K++ S++K +R+ +++ VL H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 73 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
L+ L
Sbjct: 218 LKEL 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 56/247 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T VAIK++ S++K +R+ +++I L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 73
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + ++ E G +FD+L + R RQ+
Sbjct: 74 --------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H R++H DLK EN+LL + IK+ DFG
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDA------------------------DMNIKIADFG 159
Query: 239 STAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQT 292
F N+ + Y APE+ G + P D+WS+G IL L +G F
Sbjct: 160 ---FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
Query: 293 HENLEHL 299
+NL+ L
Sbjct: 217 -QNLKEL 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA+K++ S++K +R+ +++ VL H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 73 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
L+ L
Sbjct: 218 LKEL 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++ +G+G F +V T VA+K++ S++K +R+ +++I L H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 73
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 74 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL G+M IK+ DFG
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLL---------------DGDM---------NIKIADFG 159
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 160 FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 218
Query: 296 LEHL 299
L+ L
Sbjct: 219 LKEL 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G FG+V + + VA+K R + IE +V Q + + +
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIE-NVRQEAKLFAMLKHPNIIAL 71
Query: 134 RNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD---LR 189
R ++C+V E G L L + P D++ + Q+ + Y+HD +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHS 248
+IH DLK NIL++ ++ +G++ + L K+ DFG + +
Sbjct: 129 IIHRDLKSSNILIL----------QKVENGDLSNKIL------KITDFGLAREWHRTTKM 172
Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE---HLAMMERA 305
S + APEVI +S D+WS G +L EL TGE F+ + L +AM + A
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 306 LGPLP 310
L P+P
Sbjct: 233 L-PIP 236
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 42/242 (17%)
Query: 63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
++ P +++ K+G G FG + + T E VAIK+ I+ +E + L+
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLS-- 57
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLL 179
+ Q+ + + +V E LGPSL FD R F + V QL+
Sbjct: 58 ---ATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLI 110
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+ Y+H LI+ D+KPEN L + PG KR AI +IDFG
Sbjct: 111 TRMEYVHTKSLIYRDVKPENFL------VGRPGTKR-------------QHAIHIIDFGL 151
Query: 239 ---------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
+ H S+ T Y + LG S D+ ++G + + G
Sbjct: 152 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 211
Query: 290 FQ 291
+Q
Sbjct: 212 WQ 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 69 KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKN 122
K + +GEG FG+V L C+D T E VA+K +++ ++R EID+L+ L
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
C + + + + + + LG SL D+L R+ + + F +Q+ E +
Sbjct: 77 HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
AY+H IH +L N+LL + +K+ + + + +P+ + D S
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA-------KAVPEGHEYYRVREDGDSP 183
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
F + APE + + Y D+WS G L EL T
Sbjct: 184 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA+K++ S++K +R+ +++ VL H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 73 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
L+ L
Sbjct: 218 LKEL 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 46/283 (16%)
Query: 68 YKILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRS---IRKYRDAAMI--EIDVLQHL 119
+++L +G+G +G+V + T + A+KV++ +R +D A E ++L+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
V + F + ++ E L G LF L+R F D + ++
Sbjct: 79 K------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
++ ++H +I+ DLKPENI+L +KL DFG
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIML------------------------NHQGHVKLTDFG 166
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
+ D T Y APE+++ G + D WS+G ++ ++ TG F
Sbjct: 167 LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEG 336
+ + + + LP ++ + A +K +R SRL G
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPG 269
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
++ + +G+G+FG+V+ ++T + A+KV++ +D M E +L LA+N
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-LARN- 82
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
Q+ F + + V E + G +F K + F R + +++ +
Sbjct: 83 ---HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISA 136
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
+ ++HD +I+ DLK +N+LL KL + G I G T
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG---------------ICNGVTT 181
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
++ T Y APE++ + + D W++G +L E+ G A F+ EN + L
Sbjct: 182 ------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 69 KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKN 122
K + +GEG FG+V L C+D T E VA+K +++ ++R EID+L+ L
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
C + + + + + + LG SL D+L R+ + + F +Q+ E +
Sbjct: 77 HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
AY+H IH +L N+LL + +K+ + + + +P+ + D S
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 183
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
F + APE + + Y D+WS G L EL T
Sbjct: 184 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA++++ S++K +R+ +++ VL H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 73 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
L+ L
Sbjct: 218 LKEL 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
++G G+FG V D+QT + A+K VR +E+ ++ L S V
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 128
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ + I E L G SL +K+ P D + Q LE + Y+H R++
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
H D+K +N+LL S S L DFG D S
Sbjct: 187 HGDVKADNVLLSSD-----------------------GSRAALCDFGHALCLQPDGLGKS 223
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
I T + APEV++G D+WS C+++ + G
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG-- 125
Y++L +G+G F +V T + VA+K++ D + LQ L + +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIXK 68
Query: 126 --GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFL---KRNKYCPFPVDLVREFGRQLL 179
+ V++ + + +V E G +FD+L R K R RQ++
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKFRQIV 123
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDA------------------------DXNIKIADFGF 159
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHENL 296
S F N + Y APE+ G + P D+WS+G IL L +G F +NL
Sbjct: 160 SNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNL 218
Query: 297 EHL 299
+ L
Sbjct: 219 KEL 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
++G G+FG V D+QT + A+K VR +E+ ++ L S V
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 130
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ + I E L G SL +K+ P D + Q LE + Y+H R++
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
H D+K +N+LL SS G S L DFG D S
Sbjct: 189 HGDVKADNVLL-------------SSDG----------SRAALCDFGHALCLQPDGLGKS 225
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
I T + APEV++G D+WS C+++ + G
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K V
Sbjct: 274 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK-----LV 325
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
Q+ I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 326 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 382
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 383 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 418
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
Query: 304 RA 305
R
Sbjct: 479 RG 480
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
++G G+FG V D+QT + A+K VR +E+ ++ L S V
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 114
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ + I E L G SL +K+ P D + Q LE + Y+H R++
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
H D+K +N+LL S S L DFG D S
Sbjct: 173 HGDVKADNVLLSSD-----------------------GSRAALCDFGHALCLQPDGLGKS 209
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
I T + APEV++G D+WS C+++ + G
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
Y++L +G+G F +V T + VA++++ S++K +R+ +++ VL H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
+ V++ + + +V E G +FD+L + R RQ+
Sbjct: 73 --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +V Y H ++H DLK EN+LL + IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
S F N + Y APE+ G + P D+WS+G IL L +G F +N
Sbjct: 159 FSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
L+ L
Sbjct: 218 LKEL 221
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEX 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY++ K+G G+FG + D E VAIK+ ++ IE + + + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQ-----G 61
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
IR ++ +V E LGPSL F+F R F + V Q++ +
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
Y+H IH D+KP+N L+ + K + + +IDFG
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 156
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
D + H I T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
RY++ K+G G+FG + D E VAIK+ ++ IE + + + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQ-----G 63
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
IR ++ +V E LGPSL F+F R F + V Q++ +
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
Y+H IH D+KP+N L+ + K + + +IDFG
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 158
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
D + H I T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+++ ++G G FG V + W+ T +VAIK ++ ++ + E +++ L K+DK
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNT--KVAIKTLKPGTMSPESFLEEAQIMKKL-KHDKLVQ 68
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ V I IV E + SL DFLK + + + + Q+ +AY+
Sbjct: 69 LYAVV------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL V + I K+ DFG N
Sbjct: 123 RMNYIHRDLRSANIL-VGNGLI-----------------------CKIADFGLARLIEDN 158
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE L ++ D+WS G +L EL T G + N E L
Sbjct: 159 EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 218
Query: 302 MERA 305
+ER
Sbjct: 219 VERG 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 15 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 71
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 72 V------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 124 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEX 159
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 160 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
Query: 304 RA 305
R
Sbjct: 220 RG 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 130/343 (37%), Gaps = 82/343 (23%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+GEG RV C + T + A+K++ + R E+++L G + ++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-----GHRNVLE 75
Query: 133 IRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
+ +F+ + +VFEK+ G L KR + +V + + ++ ++H+ +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 191 IHTDLKPENILL-----VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H DLKPENIL VS +K+ + S ++ C P S+ L GS
Sbjct: 133 AHRDLKPENILCEHPNQVSP--VKICDFDLGSGIKLNGDCSPISTPELLTPCGSA----- 185
Query: 246 NHSSIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
Y APEV+ + CD+WS+G IL L +G F
Sbjct: 186 ---------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-------- 228
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKLDRLK 353
R GS W G ESI+ K K
Sbjct: 229 -------------------------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ H+ A DL+ LL D +RL+A Q L HP+ +
Sbjct: 264 DWA--HISCAAK---DLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 130/343 (37%), Gaps = 82/343 (23%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+GEG RV C + T + A+K++ + R E+++L G + ++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-----GHRNVLE 75
Query: 133 IRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
+ +F+ + +VFEK+ G L KR + +V + + ++ ++H+ +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 191 IHTDLKPENILL-----VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
H DLKPENIL VS +K+ + S ++ C P S+ L GS
Sbjct: 133 AHRDLKPENILCEHPNQVSP--VKICDFGLGSGIKLNGDCSPISTPELLTPCGSA----- 185
Query: 246 NHSSIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
Y APEV+ + CD+WS+G IL L +G F
Sbjct: 186 ---------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-------- 228
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKLDRLK 353
R GS W G ESI+ K K
Sbjct: 229 -------------------------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
+ H+ A DL+ LL D +RL+A Q L HP+ +
Sbjct: 264 DWA--HISCAAK---DLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 247
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 248 VSEE------PIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
R
Sbjct: 396 RG 397
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 247
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 248 VSEE------PIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
R
Sbjct: 396 RG 397
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 18 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 74
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 75 V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 126
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 127 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 162
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 163 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
Query: 304 RA 305
R
Sbjct: 223 RG 224
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK-----LV 242
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
Q+ I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 243 QLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
R
Sbjct: 396 RG 397
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 14 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 70
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 71 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 123 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 158
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 159 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
Query: 304 RA 305
R
Sbjct: 219 RG 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 16 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 72
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 73 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 125 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 160
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 161 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
Query: 304 RA 305
R
Sbjct: 221 RG 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 22 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 78
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 79 V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP-QLV-DMSAQIASGMAYVERM 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 131 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 166
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 304 RA 305
R
Sbjct: 227 RG 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K V
Sbjct: 192 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGNMSPEAFLQEAQVMKKL-RHEK-----LV 243
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
Q+ I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 244 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 300
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 301 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLGRLIEDNEY 336
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 337 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
Query: 304 RA 305
R
Sbjct: 397 RG 398
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK +R + AM E D ++ K
Sbjct: 11 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 62
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+VFE + R + F + + + E +AY+ +
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 123 SVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 158
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G G FG V C T + A+K + R K + + ++ L+ G V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ F + + + + + G L L +++ F +R + +++ + +MH+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
+ DLKP NIL L + +++ D G + F + +
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G G FG V C T + A+K + R K + + ++ L+ G V
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ F + + + + + G L L +++ F +R + +++ + +MH+ ++
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
+ DLKP NIL L + +++ D G + F + +
Sbjct: 314 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 91/239 (38%), Gaps = 42/239 (17%)
Query: 66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
P +++ K+G G FG + + T E VAIK+ ++ +E + L D
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 66
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
Q+ + + +V E LGPSL FD R F + V QL+ +
Sbjct: 67 ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
Y+H LI+ D+KPEN L I PG K I +IDFG
Sbjct: 119 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFGLAKE 159
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ H S+ T Y + LG S D+ ++G + + G +Q
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 22 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 78
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 79 V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP-QLV-DMSAQIASGMAYVERM 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 131 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEW 166
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 304 RA 305
R
Sbjct: 227 RG 228
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
YK+ ++GEG+FG + E + ++VAIK + DA + E + LA
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP---RRSDAPQLRDEYRTYKLLAG---- 63
Query: 126 GSSHCVQIRNWFDYRN---HICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLE 180
C I N + + H +V + LGPSL D L C F V V +Q+L
Sbjct: 64 ----CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 116
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
V +H+ L++ D+KP+N L+ G S + M I ++DFG
Sbjct: 117 RVQSIHEKSLVYRDIKPDNFLI---------GRPNSKNANM----------IYVVDFGMV 157
Query: 241 AF 242
F
Sbjct: 158 KF 159
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G G FG V C T + A+K + R K + + ++ L+ G V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ F + + + + + G L L +++ F +R + +++ + +MH+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
+ DLKP NIL L + +++ D G + F + +
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G G FG V C T + A+K + R K + + ++ L+ G V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ F + + + + + G L L +++ F +R + +++ + +MH+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
+ DLKP NIL L + +++ D G + F + +
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
V T Y APEV+ G+ + D +S+GC+L +L G + F+ H+
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
YK+ ++GEG+FG + E + ++VAIK + DA + E + LA
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP---RRSDAPQLRDEYRTYKLLAG---- 64
Query: 126 GSSHCVQIRNWFDYRN---HICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLE 180
C I N + + H +V + LGPSL D L C F V V +Q+L
Sbjct: 65 ----CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 117
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
V +H+ L++ D+KP+N L+ G S + M I ++DFG
Sbjct: 118 RVQSIHEKSLVYRDIKPDNFLI---------GRPNSKNANM----------IYVVDFGMV 158
Query: 241 AF 242
F
Sbjct: 159 KF 160
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ + +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + SL DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLAAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 24 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 74
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 75 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 135 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 170
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 171 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 230
Query: 302 MERA 305
+ER
Sbjct: 231 LERG 234
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK +R + AM E D ++ K
Sbjct: 14 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+VFE + R + F + + + E +AY+ +
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 126 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 161
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 69 KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
K + +GEG FG+V L C+D T E VA+K ++ + R EI++L+ L
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
C + + + + + + LG SL D+L R+ C L+ F +Q+ E +
Sbjct: 71 HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRH--CVGLAQLLL-FAQQICEGM 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
AY+H IH L N+LL + +K+ + + + +P+ + D S
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 177
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
F + APE + + Y D+WS G L EL T
Sbjct: 178 VF-------------WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 37/257 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ L +G+G+FG+V+ + T E A+K+++ +D +E +++ G
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD-VECTMVEKRVLALPGKP 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAY 184
Q+ + F + + V E + G ++ + ++ P V E L +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----F 136
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
+ +I+ DLK +N++L S IK+ DFG
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMCKENI 172
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL-A 300
+D T Y APE+I + D W+ G +L E+ G+A F+ + E +
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 232
Query: 301 MMERALGPLPEHMIRRA 317
+ME + P+ M + A
Sbjct: 233 IMEHNVA-YPKSMSKEA 248
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGPS-LFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + L DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 69 KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
K + +GEG FG+V L C+D T E VA+K ++ + R EI++L+ L
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
C + + + + + + LG SL D+L R+ C L+ F +Q+ E +
Sbjct: 72 HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRH--CVGLAQLLL-FAQQICEGM 125
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
AY+H IH L N+LL + +K+ + + + +P+ + D S
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 178
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
F + APE + + Y D+WS G L EL T
Sbjct: 179 VF-------------WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 37/257 (14%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
+ L +G+G+FG+V+ + T E A+K+++ +D +E +++ G
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD-VECTMVEKRVLALPGKP 401
Query: 128 SHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAY 184
Q+ + F + + V E + G ++ + ++ P V E L +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----F 457
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
+ +I+ DLK +N++L S IK+ DFG
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMCKENI 493
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL-A 300
+D T Y APE+I + D W+ G +L E+ G+A F+ + E +
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 301 MMERALGPLPEHMIRRA 317
+ME + P+ M + A
Sbjct: 554 IMEHNVA-YPKSMSKEA 569
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK +R + AM E D ++ K
Sbjct: 11 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 62
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+VFE + R + F + + + E +AY+ +
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 123 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 158
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK +R + AM E D ++ K
Sbjct: 9 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 60
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+VFE + R + F + + + E +AY+ +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 121 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 156
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ E+V ++H L+H DLKP NI + +K+ + ++ + + L
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ-----DEEEQTVLTP 180
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ A H+ V T+ Y +PE I G +S+ D++S+G IL EL
Sbjct: 181 MPAYA----RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKND-- 123
R ++ + EG F V E D + A+K + S + ++ A+I E+ ++ L+ +
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 124 -KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR-NKYCPFPVDLVREFGRQLLES 181
+ S+ + + ++ E L +FLK+ P D V + Q +
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 182 VAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
V +MH + +IH DLK EN+LL + IKL + SA + +
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF---------------GSATTISHYPD 193
Query: 240 TAFDNQNHSSIV------STRHYRAPEVILGLGWSYPC----DMWSVGCILVELC 284
++ Q + + +T YR PE+I L ++P D+W++GCIL LC
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 35/160 (21%)
Query: 130 CVQIRNWFDYRNH-----ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
VQI N+ ++ + IV E +G LKR+K PV + ++L +++Y
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVG---GQSLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
+H + L++ DLKPENI+L + +KLID G+ + N
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ-------------------------LKLIDLGAVSRIN 232
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ + T ++APE++ G + D+++VG L L
Sbjct: 233 -SFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 22 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 72
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 73 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 133 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 168
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 169 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
Query: 302 MERA 305
+ER
Sbjct: 229 LERG 232
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 26 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 76
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 77 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 137 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 172
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 173 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 232
Query: 302 MERA 305
+ER
Sbjct: 233 LERG 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 16 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 67 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
+ER
Sbjct: 223 LERG 226
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 25 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 75
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 76 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 136 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 171
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 172 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 231
Query: 302 MERA 305
+ER
Sbjct: 232 LERG 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + + +VA+K ++ A + E ++++ L ++DK
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNST-KVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 73
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ V R I I+ E + SL DFLK ++ + + +F Q+ E +AY+
Sbjct: 74 YAVVTR-----EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
IH DL+ N+L+ S C K+ DFG + ++
Sbjct: 129 KNYIHRDLRAANVLVSES-----------------LMC-------KIADFGLARVIEDNE 164
Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+++ + + APE I ++ D+WS G +L E+ T
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 18 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 68
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 69 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 129 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 164
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 165 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 224
Query: 302 MERA 305
+ER
Sbjct: 225 LERG 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 48/239 (20%)
Query: 68 YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRSIRKYRDAAMIEI-----DVLQHL 119
+++L +G G +G+V + T + A+KV++ + A E VL+H+
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREFGRQ 177
+ S V + F + ++ + + G LF L +R ++ V + + +
Sbjct: 116 RQ-----SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI---YVGE 167
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
++ ++ ++H L +I+ D+K ENILL S + + L DF
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDS------------------------NGHVVLTDF 203
Query: 238 GST----AFDNQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
G + A + + T Y AP+++ G G D WS+G ++ EL TG + F
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73 KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
K+G+G FG V + W+ T RVAIK ++ +A + E V++ L +++K + V
Sbjct: 25 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGPS-LFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
I IV E + L DFLK KY P LV + Q+ +AY+ +
Sbjct: 82 V------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
+H DL+ NIL+ GE + K+ DFG N
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
+ + APE L ++ D+WS G +L EL T G + N E L +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
R
Sbjct: 230 RG 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NIL+ ++ +A+K++DFG
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISAT------------------------NAVKVVDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 163 ARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 17 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 67
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 68 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 128 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 163
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 164 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 223
Query: 302 MERA 305
+ER
Sbjct: 224 LERG 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 43/240 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
+ L +G+G+FG+V+ + T+E AIK+++ +D M+E VL L K
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK-- 78
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLE 180
Q+ + F + + V E + G ++ + K+ P V E L
Sbjct: 79 ---PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF- 134
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
++H +I+ DLK +N++L S IK+ DFG
Sbjct: 135 ---FLHKRGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMC 167
Query: 241 A---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
D T Y APE+I + D W+ G +L E+ G+ F + E
Sbjct: 168 KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 16 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 67 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
+ER
Sbjct: 223 LERG 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 22 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 72
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 73 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 133 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 168
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 169 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
Query: 302 MERA 305
+ER
Sbjct: 229 LERG 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 11 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 61
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 62 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 122 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 157
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 158 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 217
Query: 302 MERA 305
+ER
Sbjct: 218 LERG 221
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 21 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 71
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 72 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 132 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 167
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 168 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 227
Query: 302 MERA 305
+ER
Sbjct: 228 LERG 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 137/353 (38%), Gaps = 79/353 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
++IL +G G F V +QT + A+K++ + + E DVL +
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN----- 117
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
G Q+ F N++ +V E +G L L + P ++ R + +++ ++
Sbjct: 118 -GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAI 175
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
+H L +H D+KP+NILL RC I+L DFGS
Sbjct: 176 DSVHRLGYVHRDIKPDNILLD--------------------RC----GHIRLADFGSCLK 211
Query: 242 --FDNQNHSSI-VSTRHYRAPEVILGLGWSY-------PCDMWSVGCILVELCTGEALF- 290
D S + V T Y +PE++ +G CD W++G E+ G+ F
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Query: 291 -----QTHENL----EHLAM--------------MERALGPLPEHMIRRASRG---TEKY 324
+T+ + EHL++ ++R L P PE + R G T +
Sbjct: 272 ADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
Query: 325 FR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG 373
F G R + P E D +++ ++ V TL+D+ G
Sbjct: 331 FFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREG 383
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 16 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 67 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH DL+ NIL+ + C K+ DFG N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
+ER
Sbjct: 223 LERG 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ E+V ++H L+H DLKP NI + +K+ + ++ + + L
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ-----DEEEQTVLTP 226
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ A H V T+ Y +PE I G +S+ D++S+G IL EL
Sbjct: 227 MPAYA----THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 31/137 (22%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NI++ ++ +A+K++DFG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F T
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TG 221
Query: 294 ENLEHLAMMERALGPLP 310
++ + +A P+P
Sbjct: 222 DSPDSVAYQHVREDPIP 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 60/250 (24%)
Query: 64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI-------------------KVVRSIRK 104
L +Y + +GEG++G+V E D +T R A+ K ++ +R+
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 105 YRDAAMIE-IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKY 163
R +I+ +DVL + K + + +C + E + D + +
Sbjct: 63 LRHKNVIQLVDVLYNEEKQ-----------KMYMVMEYCVCGMQE-----MLDSVPEKR- 105
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
FPV + QL++ + Y+H ++H D+KP N+LL ++ G +
Sbjct: 106 --FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL-------------TTGGTLKI 150
Query: 224 RCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW--SYPCDMWSVGCILV 281
L + A+ T +Q + ++ PE+ GL + D+WS G L
Sbjct: 151 SALGVAEALHPFAADDTCRTSQGSPA------FQPPEIANGLDTFSGFKVDIWSAGVTLY 204
Query: 282 ELCTGEALFQ 291
+ TG F+
Sbjct: 205 NITTGLYPFE 214
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 367 LTDLLHGLLRYDPSERLTARQALNHPFFR 395
L+DLL G+L Y+P++R + RQ H +FR
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 42/239 (17%)
Query: 66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
P +++ K+G G FG + + T E VAIK+ ++ +E + L D
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 66
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
Q+ + + +V E LGPSL FD R F + V QL+ +
Sbjct: 67 ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
Y+H LI+ D+KPEN L I PG K I +IDF
Sbjct: 119 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFALAKE 159
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ H S+ T Y + LG S D+ ++G + + G +Q
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 42/239 (17%)
Query: 66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
P +++ K+G G FG + + T E VAIK+ ++ +E + L D
Sbjct: 30 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 87
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
Q+ + + +V E LGPSL FD R F + V QL+ +
Sbjct: 88 ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 139
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
Y+H LI+ D+KPEN L I PG K I +IDF
Sbjct: 140 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFALAKE 180
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ H S+ T Y + LG S D+ ++G + + G +Q
Sbjct: 181 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 90/236 (38%), Gaps = 41/236 (17%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
++ K+G G FG + + T E VAIK+ I+ +E + L +G
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGSAGEG--- 58
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
Q+ + + +V E LGPSL FD R F + V QLL + Y+
Sbjct: 59 -LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYV 113
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG------- 238
H LI+ D+KPEN L I G K K I +IDFG
Sbjct: 114 HSKNLIYRDVKPENFL------IGRQGNK-------------KEHVIHIIDFGLAKEYID 154
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
+ H S+ T Y + LG S D+ ++G + + G +Q
Sbjct: 155 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NI++ ++ +A+K++DFG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NI++ ++ +A+K++DFG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NI++ ++ +A+K++DFG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G FG V + +VA+K ++ DA + E ++++ L
Sbjct: 12 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 62
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 63 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ IH +L+ NIL+ + C K+ DFG N
Sbjct: 123 ERNYIHRNLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 158
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
+ + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 159 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 218
Query: 302 MERA 305
+ER
Sbjct: 219 LERG 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK ++ D + E +V+ L+
Sbjct: 31 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSH------P 82
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+VFE + R + F + + + E +AY+ +
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 143 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 178
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
+++ + H +IH D+KP NI++ ++ +A+K++DFG
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 179
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+ A + +S +++ T Y +PE G D++S+GC+L E+ TGE F
Sbjct: 180 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ K+G G FG V + + +VA+K ++ A + E ++++ L ++DK
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNST-KVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 72
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ V + I I+ E + SL DFLK ++ + + +F Q+ E +AY+
Sbjct: 73 YAVVTK-----EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
IH DL+ N+L+ S C K+ DFG + ++
Sbjct: 128 KNYIHRDLRAANVLVSES-----------------LMC-------KIADFGLARVIEDNE 163
Query: 247 HSSIVSTRH---YRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+++ + + APE I ++ ++WS G +L E+ T
Sbjct: 164 YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
+Y++ K+G G+FG + + + E VAIK+ ++ IE + + G
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-ECVKTKHPQLHIESKFYKMMQ-----G 63
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
I+ ++ +V E LGPSL F+F R F + V Q++ +
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
Y+H IH D+KP+N L+ + K + + +IDFG
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 158
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
D + H I T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
L E Q+ + V Y+H +LIH DLKP NI LV ++
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK----------------------- 173
Query: 230 SAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+K+ DFG ++ ++ + T Y +PE I + D++++G IL EL
Sbjct: 174 -QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
+ ++G G FG V L W +++VAIK +R + AM E D ++ K
Sbjct: 12 FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 63
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + IC+V E + R + F + + + E +AY+ +
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+IH DL N L+ GE + IK+ DFG T F D+Q
Sbjct: 124 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 159
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS + + +PEV +S D+WS G ++ E+ + G+ ++ N E
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 45/254 (17%)
Query: 44 SPPRRDDDRE----GHYVFNL-GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKV 98
+PPR D + G+ F + ++L P + ++G G +G V + + + +A+K
Sbjct: 28 TPPRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSGQIMAVKR 83
Query: 99 VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL 158
+R+ ++ + +D+ + D V + I E + SL F
Sbjct: 84 IRATVNSQEQKRLLMDLDISMRTVD---CPFTVTFYGALFREGDVWICMELMDTSLDKFY 140
Query: 159 KR--NKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKR 215
K+ +K P D++ + +++++ ++H L +IH D+KP N+L+
Sbjct: 141 KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI------------- 187
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVI----LGLGWSY 269
++ G+ +K+ DFG + + D+ + + Y APE I G+S
Sbjct: 188 NALGQ-----------VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSV 236
Query: 270 PCDMWSVGCILVEL 283
D+WS+G ++EL
Sbjct: 237 KSDIWSLGITMIEL 250
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 42/240 (17%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DAAMIEIDVLQHLAKNDK 124
++ LS++G G++G V + ++ A+K RS+ +R D A +V H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSH---EKV 113
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-----PFPVDLVREFGRQLL 179
G CV++ ++ + + E GPSL ++C P V + R L
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCGPSL------QQHCEAWGASLPEAQVWGYLRDTL 167
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
++A++H L+H D+KP NI L KL + L++ G+
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL------------------LVELGT 209
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
Y APE++ G + D++S+G ++E+ L E + L
Sbjct: 210 AGAGEVQEGD----PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
++H DLKP N+ L + +KL DFG N + S
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDTSF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ V T +Y +PE + + ++ D+WS+GC+L ELC
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
++H DLKP N+ L + +KL DFG N + S
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDTSF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ V T +Y +PE + + ++ D+WS+GC+L ELC
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 79 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++ ++
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHXVM---- 180
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
Q H + + APE + +S+ D W G L E+ T
Sbjct: 181 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 79 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++ ++
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHYVM---- 180
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
Q H + + APE + +S+ D W G L E+ T
Sbjct: 181 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
+KMGEG FG V + + T VA+K + AAM++I Q + K
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
+ V++ + + +C+V+ + SL D L + P + + + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H+ IH D+K NILL + K+ + + + E F T
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQTVM 191
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
S IV T Y APE + G + D++S G +L+E+ TG
Sbjct: 192 ----XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 69 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++ ++
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHXVM---- 170
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
Q H + + APE + +S+ D W G L E+ T
Sbjct: 171 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 78 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 129
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 183 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 73 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 169
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ Q H + + APE + +S+ D W G L E+ T
Sbjct: 170 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 73 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++ ++
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHYVM---- 174
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
Q H + + APE + +S+ D W G L E+ T
Sbjct: 175 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 76 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 127
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 181 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 80 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 184
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 185 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 73 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA-IKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEFFKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 79 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 130
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 183
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 184 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 104 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 155
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 208
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 209 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 91 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 195
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 196 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 91 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 195
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 196 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 59/255 (23%)
Query: 67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEI------------- 113
+Y + ++G+G++G V ++ A+KV+ + R A
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 114 --------DVLQHLAKNDKGGSSHCVQIRNWFDYRN--HICIVFEKL--GPSLFDFLKRN 161
V Q +A K + V++ D N H+ +VFE + GP ++
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVP 129
Query: 162 KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
P D R + + L++ + Y+H ++IH D+KP N+L+ GE
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----------------GE- 172
Query: 222 PFRCLPKSSAIKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVIL---GLGWSYPCDMWS 275
IK+ DFG S F + S+ V T + APE + + D+W+
Sbjct: 173 -------DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWA 225
Query: 276 VGCILVELCTGEALF 290
+G L G+ F
Sbjct: 226 MGVTLYCFVFGQCPF 240
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 72 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 123
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 177 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 69 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ Q H + + APE + +S+ D W G L E+ T
Sbjct: 166 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 73 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
++L K+G+G+FG V WD + + V++ V V S + D + E++ + L
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
H IR + + +L P SL D L++++ F + + + Q+
Sbjct: 69 ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
E + Y+ R IH DL N+LL + + +K+ + G M R LP++
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ Q H + + APE + +S+ D W G L E+ T
Sbjct: 166 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 77 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 128
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 182 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 73 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 28 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 80
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 139
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 140 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEE 175
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 301 MMERALGP 308
R P
Sbjct: 236 QGLRLYRP 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 55/240 (22%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDK-- 124
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 125 ---GGSSH---CVQIRNWFDYRNHICIVFEK----LGPSLF-----DFLKRNKYCPFPVD 169
G +H + I + Y + + + K LGPSL + L + P +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH D+ N+LL + K+
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------ 200
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
DFG A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 201 ------DFG-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 71 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 122
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 176 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
+GE+ +++L G G FG V C + T + A K + R + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
L + S V + F+ + +C+V + +++ + N P +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+ Q++ + ++H +I+ DLKPEN+LL G + L +
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+K G T T + APE++LG + + D +++G L E+ F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
+ E +E+ + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
++H DLKP N+ L + +KL DFG N +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDEDF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
V T +Y +PE + + ++ D+WS+GC+L ELC
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
+GE+ +++L G G FG V C + T + A K + R + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
L + S V + F+ + +C+V + +++ + N P +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+ Q++ + ++H +I+ DLKPEN+LL G + L +
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+K G T T + APE++LG + + D +++G L E+ F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
+ E +E+ + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
+GE+ +++L G G FG V C + T + A K + R + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
L + S V + F+ + +C+V + +++ + N P +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+ Q++ + ++H +I+ DLKPEN+LL G + L +
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+K G T T + APE++LG + + D +++G L E+ F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
+ E +E+ + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 65/248 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF-PVDL 170
H + + N + + F K G +L +L KRN++ P+ P DL
Sbjct: 90 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKPEDL 140
Query: 171 VREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
++F Q+ + + ++ + IH DL NILL
Sbjct: 141 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL------------------- 181
Query: 222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWS 275
+ + +K+ DFG A D V R APE I ++ D+WS
Sbjct: 182 -----SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 276 VGCILVEL 283
G +L E+
Sbjct: 236 FGVLLWEI 243
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K++ ++G G G V + +VA+K ++ DA + E ++++ L
Sbjct: 16 KLVERLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
H +R + + I I+ E + SL DFLK ++ + + Q+ E +A++
Sbjct: 67 HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
+ IH DL+ NIL+ + C K+ DFG + ++
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDA 162
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
++ + + APE I ++ D+WS G +L E+ T G + N E +
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
+ER
Sbjct: 223 LERG 226
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 28 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 80
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 139
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 140 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 175
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 301 MMERALGP 308
R P
Sbjct: 236 QGLRLYRP 243
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 26/116 (22%)
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
L E Q+ + V Y+H +LI+ DLKP NI LV ++
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK----------------------- 159
Query: 230 SAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+K+ DFG ++ ++ T Y +PE I + D++++G IL EL
Sbjct: 160 -QVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
T + L K+G G FG V +C R AIK RS +K ++ E + L+ + A
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
G SH V+ + + +H+ I E G SL D + N F +++ Q+
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
+ Y+H + L+H D+KP NI +
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFI 148
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
+KMGEG FG V + + T VA+K + AAM++I Q + K
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
+ V++ + + +C+V+ + SL D L + P + + + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H+ IH D+K NILL + K+ + + + E F T
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQTVM 191
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ IV T Y APE + G + D++S G +L+E+ TG
Sbjct: 192 XXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 125 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 175
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
DL ++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
P Y R +P + + APE I +
Sbjct: 236 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 264
Query: 268 SYPCDMWSVGCILVEL 283
+ D+WS G +L E+
Sbjct: 265 TIQSDVWSFGVLLWEI 280
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
T + L K+G G FG V +C R AIK RS +K ++ E + L+ + A
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
G SH V+ + + +H+ I E G SL D + N F +++ Q+
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
+ Y+H + L+H D+KP NI +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
T + L K+G G FG V +C R I ++ +K ++ E + L+ + A
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDG---CIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
G SH V+ + + +H+ I E G SL D + N F +++ Q+
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
+ Y+H + L+H D+KP NI +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
T + L K+G G FG V +C R AIK RS +K ++ E + L+ + A
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
G SH V+ + + +H+ I E G SL D + N F +++ Q+
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
+ Y+H + L+H D+KP NI +
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
+GE+ +++L G G FG V C + T + A K + R + AM+E +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
L + S V + F+ + +C+V + +++ + N P +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+ Q++ + ++H +I+ DLKPEN+LL G + L +
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
+K G T T + APE++LG + + D +++G L E+ F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
+ E +E+ + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 19 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 71
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 131 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 166
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
Query: 301 MMERALGP 308
R P
Sbjct: 227 QGLRLYRP 234
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 90 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKEAPE 140
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
DL ++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
P Y R +P + + APE I +
Sbjct: 201 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 229
Query: 268 SYPCDMWSVGCILVEL 283
+ D+WS G +L E+
Sbjct: 230 TIQSDVWSFGVLLWEI 245
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K+L +G+G FG V+ R +VA+K +++ A + E V+ L S
Sbjct: 15 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 65
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ VQ+ + + + IV E + SL D+L+ D + +F + E++ Y+
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+H DL N+L+ + + K+ DFG T +
Sbjct: 126 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 161
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ + APE + +S D+WS G +L E+
Sbjct: 162 QDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV 251
H D+KPENIL+ + +F L + +S+ ++ KL G+T V
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA----------TTDEKLTQLGNT----------V 196
Query: 252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
T +Y APE +Y D++++ C+L E TG +Q
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 8 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 60
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 119
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 120 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 155
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
Query: 301 MMERALGP 308
R P
Sbjct: 216 QGLRLYRP 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQ---TQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA-K 121
K + +GEG FG+V C +D + T E+VA+K ++ A + EI++L++L +
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE--FGRQL 178
N C + D N I ++ E L SL ++L +NK ++L ++ + Q+
Sbjct: 84 NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQI 135
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ + +H DL N+L+ S +K+ + + AI+
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKAIETDKEX 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
T D+++ S + APE ++ + D+WS G L EL T +
Sbjct: 183 XTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
+A+ + +GP M T + G RL P
Sbjct: 233 MALFLKMIGPTHGQMTVTRLVNT---LKEGKRLPCP 265
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 13 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 65
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 125 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 160
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 301 MMERALGP 308
R P
Sbjct: 221 QGLRLYRP 228
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 88 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
DL ++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
P Y R +P + + APE I +
Sbjct: 199 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 227
Query: 268 SYPCDMWSVGCILVEL 283
+ D+WS G +L E+
Sbjct: 228 TIQSDVWSFGVLLWEI 243
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 12 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 64
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 124 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 159
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS+ S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
Query: 301 MMERALGP 308
R P
Sbjct: 220 QGLRLYRP 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
+ ++G G +G V + + + +A+K +R+ ++ + +D+ + D
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD---CPFT 68
Query: 131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHD- 187
V + I E + SL F K+ +K P D++ + +++++ ++H
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQ 245
L +IH D+KP N+L+ ++ G+ +K+ DFG + + D+
Sbjct: 129 LSVIHRDVKPSNVLI-------------NALGQ-----------VKMCDFGISGYLVDDV 164
Query: 246 NHSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVEL 283
+ Y APE I G+S D+WS+G ++EL
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+++K + L+ ++ Q+
Sbjct: 74 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KLIDFG 238
+ + Y+ R IH +L NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT-------KVLPQDKEYYKVKEPG 178
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 179 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQ---TQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA-K 121
K + +GEG FG+V C +D + T E+VA+K ++ A + EI++L++L +
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE--FGRQL 178
N C + D N I ++ E L SL ++L +NK ++L ++ + Q+
Sbjct: 72 NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ + +H DL N+L+ S +K+ + + AI+
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKAIETDKEX 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
T D+++ S + APE ++ + D+WS G L EL T +
Sbjct: 171 XTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 220
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
+A+ + +GP M T + G RL P
Sbjct: 221 MALFLKMIGPTHGQMTVTRLVNT---LKEGKRLPCP 253
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
G + RN + + F G SL ++L+++K + L+ ++ Q+ +
Sbjct: 76 IVKYKGVCYSAGRRNL-----KLIMEFLPYG-SLREYLQKHKERIDHIKLL-QYTSQICK 128
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFGS 239
+ Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPGE 181
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 182 SPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPF------PVDL--VREFGRQ 177
+ V + + + ++ E L +FL+R P++L + F Q
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + +A++ IH D+ N+LL + K+ DF
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------------DF 204
Query: 238 GSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
G A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 205 G-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 81/355 (22%)
Query: 68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGG 126
Y+I+ + +G F +++ C ++ + K +S+ K RD D + +K D
Sbjct: 33 YRIIRTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91
Query: 127 SS----------HCVQIRNWFDYRNHICIVFEKL-GPSLFDF------LKRNKYCPFPVD 169
+ +C+ + + I++E + S+ F L +N C P+
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 170 LVREFGRQLLESVAYMHDLRLI-HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
+++ + +L S +Y+H+ + I H D+KP NIL + K
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL------------------------MDK 187
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSY---PCDMWSVGCILVEL 283
+ +KL DFG + + D + S T + PE SY D+WS+G L +
Sbjct: 188 NGRVKLSDFGESEYMVDKKIKGS-RGTYEFMPPEFFSNES-SYNGAKVDIWSLGICLYVM 245
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
F ++++E +++ R Y + +S E I
Sbjct: 246 FYNVVPFSL-----KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI 300
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
D L LR +P+ER+T+ AL H + + N
Sbjct: 301 -------------------------DFLKLFLRKNPAERITSEDALKHEWLADTN 330
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPF------PVDL--VREFGRQ 177
+ V + + + ++ E L +FL+R P++L + F Q
Sbjct: 103 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + +A++ IH D+ N+LL + K+ DF
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------------DF 196
Query: 238 GSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
G A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 197 G-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K+L +G+G FG V+ R +VA+K +++ A + E V+ L S
Sbjct: 24 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 74
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ VQ+ + + + IV E + SL D+L+ D + +F + E++ Y+
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+H DL N+L+ + + K+ DFG T +
Sbjct: 135 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 170
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ + APE + +S D+WS G +L E+
Sbjct: 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 79/256 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + F K G +L +L KRN++ P+ P
Sbjct: 79 G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
DL ++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
P Y R +P + + APE I +
Sbjct: 190 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 218
Query: 268 SYPCDMWSVGCILVEL 283
+ D+WS G +L E+
Sbjct: 219 TIQSDVWSFGVLLWEI 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 79 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
DL ++F Q+ + + ++ + IH DL NILL
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 172
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
+ + +K+ DFG A D V R APE I ++ D+
Sbjct: 173 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 274 WSVGCILVEL 283
WS G +L E+
Sbjct: 225 WSFGVLLWEI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 79/256 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + F K G +L +L KRN++ P+ P
Sbjct: 79 G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
DL ++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
P Y R +P + + APE I +
Sbjct: 190 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 218
Query: 268 SYPCDMWSVGCILVEL 283
+ D+WS G +L E+
Sbjct: 219 TIQSDVWSFGVLLWEI 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K+L +G+G FG V+ R +VA+K +++ A + E V+ L S
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 246
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ VQ+ + + + IV E + SL D+L+ D + +F + E++ Y+
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+H DL N+L+ + + K+ DFG T +
Sbjct: 307 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 342
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ + APE + +S D+WS G +L E+
Sbjct: 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 77/255 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R + +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPFPVDLV 171
H + + N + + F K G +L +L KRN++ P+ DL
Sbjct: 88 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYK-DLY 137
Query: 172 REF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------ 210
++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 138 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP 270
P Y R +P + + APE I ++
Sbjct: 198 PDYVRKGDARLPLK-------------------------------WMAPETIFDRVYTIQ 226
Query: 271 CDMWSVGCILVELCT 285
D+WS G +L E+ +
Sbjct: 227 SDVWSFGVLLWEIFS 241
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
K+L +G+G FG V+ R +VA+K +++ A + E V+ L S
Sbjct: 9 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 59
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ VQ+ + + + IV E + SL D+L+ D + +F + E++ Y+
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+H DL N+L+ + + K+ DFG T +
Sbjct: 120 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 155
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
+ + APE + +S D+WS G +L E+
Sbjct: 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 88 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
DL ++F Q+ + + ++ + IH DL NILL
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 181
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
+ + +K+ DFG A D V R APE I ++ D+
Sbjct: 182 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 274 WSVGCILVEL 283
WS G +L E+
Sbjct: 234 WSFGVLLWEI 243
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
+KMGEG FG V + + T VA+K + AAM++I Q + K
Sbjct: 31 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
+ V++ + + +C+V+ + SL D L + P + + + +
Sbjct: 81 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H+ IH D+K NILL + K+ + + + E F
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQXVM 185
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+ IV T Y APE + G + D++S G +L+E+ TG
Sbjct: 186 XXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + + F K G +L +L KRN++ P+ P
Sbjct: 88 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
DL ++F Q+ + + ++ + IH DL NILL
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 181
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
+ + +K+ DFG A D V R APE I ++ D+
Sbjct: 182 -------SEKNVVKICDFG-LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 274 WSVGCILVEL 283
WS G +L E+
Sbjct: 234 WSFGVLLWEI 243
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 72 SKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
+++G G+FG V + W ++ +KVV + A E+ VL+ +
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKI-LKVVDPTPEQFQAFRNEVAVLR---------KTRH 91
Query: 131 VQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
V I + Y ++++ IV + G SL+ L + F + + + RQ + + Y+H
Sbjct: 92 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA 150
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
+IH D+K NI L +K+ + ++ +K GS +
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLAT--------------VKSRWSGSQQVEQPTG 196
Query: 248 SSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
S + + APEVI +S+ D++S G +L EL TGE + N + + M
Sbjct: 197 SVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 74/276 (26%)
Query: 130 CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPF---PVDLVREFGRQLLESVAYMH 186
C + F Y I E +L +++++ + P+ L++ Q +A++H
Sbjct: 85 CTEKDRQFQY-----IAIELCAATLQEYVEQKDFAHLGLEPITLLQ----QTTSGLAHLH 135
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
L ++H DLKP NIL I +P + L K A+ G +F +
Sbjct: 136 SLNIVHRDLKPHNIL------ISMPNAHGKIKAMISDFGLCKKLAV-----GRHSFSRR- 183
Query: 247 HSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
S + T + APE++ +Y D++S GC+
Sbjct: 184 -SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY---------------------- 220
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
++I S K +R + N GA S + + K D +
Sbjct: 221 --------YVISEGSHPFGKSLQRQA--NILLGACSLDCLHPEKHEDVIAR--------- 261
Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
+L+ ++ DP +R +A+ L HPFF +L +
Sbjct: 262 -----ELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
K L ++G+G FG V C T E VA+K ++ S ++ EI++L+ L ++
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
G + RN + ++ E L SL D+L+ + + L+ ++ Q+
Sbjct: 76 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQIC 127
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
+ + Y+ R IH DL NIL+ + +K+ + + + LP+ K+ + G
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + APE + +S D+WS G +L EL T
Sbjct: 181 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
G SL+ L ++ F + + + RQ + Y+H +IH DLK NI L +K+
Sbjct: 91 GSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 149
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGW 267
+ ++ +K GS F+ + S + + APEVI +
Sbjct: 150 GDFGLAT--------------VKSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDSNPY 190
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
S+ D+++ G +L EL TG+ + N + + M
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 67/250 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R K+ +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
H + + N + F K G +L +L KRN++ P+ P
Sbjct: 79 G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
DL ++F Q+ + + ++ + IH DL NILL
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 172
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
+ + +K+ DFG A D V R APE I ++ D+
Sbjct: 173 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 274 WSVGCILVEL 283
WS G +L E+
Sbjct: 225 WSFGVLLWEI 234
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 77/253 (30%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R + +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPFPVDLV 171
H + + N + + F K G +L +L KRN++ P+ DL
Sbjct: 88 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYK-DLY 137
Query: 172 REF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------ 210
++F Q+ + + ++ + IH DL NILL +K+
Sbjct: 138 KDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP 270
P Y R +P + + APE I ++
Sbjct: 198 PDYVRKGDARLPLK-------------------------------WMAPETIFDRVYTIQ 226
Query: 271 CDMWSVGCILVEL 283
D+WS G +L E+
Sbjct: 227 SDVWSFGVLLWEI 239
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
L ++G G FG V++ + Q VAIK+++ D + E V+ +L+
Sbjct: 13 FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 65
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
VQ+ + I I+ E + L ++L+ ++ F + E + + E++ Y+
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ +H DL N L+ +K+ DFG + + D++
Sbjct: 125 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 160
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
SS S R PEV++ +S D+W+ G ++ E+ + + F E EH+A
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 301 MMERALGP 308
R P
Sbjct: 221 QGLRLYRP 228
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 66/249 (26%)
Query: 67 RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
R + +G G FG+V+E D+ R VA+K+++ + + A M E+ +L H+
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF--PVD 169
H + + N + + F K G +L +L KRN++ P+ P D
Sbjct: 89 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKTPED 139
Query: 170 LVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
L ++F Q+ + + ++ + IH DL NILL
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL------------------ 181
Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMW 274
+ + +K+ DFG A D V R APE I ++ D+W
Sbjct: 182 ------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 275 SVGCILVEL 283
S G +L E+
Sbjct: 235 SFGVLLWEI 243
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 180
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 181 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 236 YSNINNRDQIIFM 248
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 181
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 182 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 237 YSNINNRDQIIFM 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
G SL+ L ++ F + + + RQ + Y+H +IH DLK NI L +K+
Sbjct: 103 GSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGW 267
+ ++ K GS F+ + S + + APEVI +
Sbjct: 162 GDFGLATE--------------KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDSNPY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
S+ D+++ G +L EL TG+ + N + + M
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKN 122
K +S++G+G FG V C +D A+ V+ ++ + RD EI +L+ L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALH-- 69
Query: 123 DKGGSSHCVQIR--NWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFGRQL 178
S V+ R ++ R + +V E L PS L DFL+R++ + + Q+
Sbjct: 70 ----SDFIVKYRGVSYGPGRQSLRLVMEYL-PSGCLRDFLQRHR-ARLDASRLLLYSSQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ R +H DL NIL+ S +K+ + + + LP +D
Sbjct: 124 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-------KLLP-------LDKD 169
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
S I + APE + +S D+WS G +L EL T
Sbjct: 170 YYVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
G SL+ L ++ F + + + RQ + Y+H +IH DLK NI L +K+
Sbjct: 103 GSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGW 267
+ ++ K GS F+ + S + + APEVI +
Sbjct: 162 GDFGLATE--------------KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDSNPY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
S+ D+++ G +L EL TG+ + N + + M
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
+G+G FG+ ++ R+T E + +K ++R + + + E+ V++ L + ++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE------HPNVLK 71
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
+ + E + + ++ +P F + + +AY+H + +IH
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS 252
DL N L+ ++ + + + G K+ L D + ++V
Sbjct: 132 RDLNSHNCLVRENKNVVVADF-----GLARLMVDEKTQPEGLRSLKKP--DRKKRYTVVG 184
Query: 253 TRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
++ APE+I G + D++S G +L E+
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKN 122
K +S++G+G FG V C +D A+ V+ ++ + RD EI +L+ L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALH-- 82
Query: 123 DKGGSSHCVQIR--NWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFGRQL 178
S V+ R ++ R + +V E L PS L DFL+R++ + + Q+
Sbjct: 83 ----SDFIVKYRGVSYGPGRQSLRLVMEYL-PSGCLRDFLQRHR-ARLDASRLLLYSSQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ R +H DL NIL+ S +K+ + + + LP +D
Sbjct: 137 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-------KLLP-------LDKD 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
S I + APE + +S D+WS G +L EL T
Sbjct: 183 YYVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 50/234 (21%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDK-- 124
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 125 ---GGSSH---CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE---FG 175
G +H + I + Y + + + K P L ++ + P R+ F
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL-EYSYNPSHNPEEQLSSRDLLHFS 172
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
Q+ + +A++ IH D+ N+LL + K+
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------------ 208
Query: 236 DFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
DFG A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 209 DFG-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G FG + + E+ A VV+ + E+ Q +AK D C++
Sbjct: 44 KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKD------CIK 97
Query: 133 I---RNWFDY----------------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
R DY R++ +V E+LG L +N F V +
Sbjct: 98 KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQ 155
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILL 202
G ++L+ + Y+H+ +H D+K N+LL
Sbjct: 156 LGIRMLDVLEYIHENEYVHGDIKAANLLL 184
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
+L ++G G FG V++ + Q VA+K+++ + +M E + Q K
Sbjct: 12 LLKELGSGQFG-VVKLGKWKGQYDVAVKMIK------EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
V+ I IV E + L ++L+ + P L+ E + E +A++
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLESH 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
+ IH DL N L+ + +K+ DFG T + D+Q
Sbjct: 124 QFIHRDLAARNCLV------------------------DRDLCVKVSDFGMTRYVLDDQY 159
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
SS+ + + APEV +S D+W+ G ++ E+ + G+ + + N E
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKN 122
K +S++G+G FG V C +D A+ V+ ++ + RD EI +L+ L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALH-- 70
Query: 123 DKGGSSHCVQIR--NWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFGRQL 178
S V+ R ++ R + +V E L PS L DFL+R++ + + Q+
Sbjct: 71 ----SDFIVKYRGVSYGPGRQSLRLVMEYL-PSGCLRDFLQRHR-ARLDASRLLLYSSQI 124
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ R +H DL NIL+ S +K+ + + + LP +D
Sbjct: 125 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-------KLLP-------LDKD 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
S I + APE + +S D+WS G +L EL T
Sbjct: 171 YYVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 158
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 159 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 214 YSNINNRDQIIFM 226
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 155
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 156 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 211 YSNINNRDQIIFM 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 158
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 159 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 214 YSNINNRDQIIFM 226
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 58 FNLGENLTPRYKILSKMGEGTFGRVLECW-----DRQTQERVAIKVVRSIRKYRDAAMIE 112
F LG L + +L GEG F +V E D + +++ +KV + + E
Sbjct: 60 FQLGSKLVYVHHLL---GEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW------E 110
Query: 113 IDVLQHLAKNDKGGSSHC-VQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCP---FP 167
+ L + K H ++ + ++N +V E +L + + K P P
Sbjct: 111 FYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
LV F ++L + +HD +IH D+KP+N +L + F++ S+G + L
Sbjct: 171 QGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL-GNGFLEQDDEDDLSAG-LALIDLG 228
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
+S +KL G+ ++ T ++ E++ W+Y D + V + + G
Sbjct: 229 QSIDMKLFPKGTI------FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 281
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 58/237 (24%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYC-----PFPV--------DLVR 172
+ V + + + ++ E L +FL+R F + DL+
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
F Q+ + +A++ IH D+ N+LL + K+
Sbjct: 169 -FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG--------------------- 206
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
DFG A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 207 ---DFG-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 153
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 154 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 209 YSNINNRDQIIFM 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--------------V 153
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 154 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 209 YSNINNRDQIIFM 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 58/237 (24%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E +VA+K+++S ++A M E+ ++ HL +++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYC-----PFPV--------DLVR 172
+ V + + + ++ E L +FL+R F + DL+
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
F Q+ + +A++ IH D+ N+LL + K+
Sbjct: 169 -FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG--------------------- 206
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
DFG A D N S+ + + R APE I ++ D+WS G +L E+
Sbjct: 207 ---DFG-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 69 KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKN 122
K +S++G+G FG V C +D A+ V+ ++ + RD EI +L+ L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALH-- 66
Query: 123 DKGGSSHCVQIR--NWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFGRQL 178
S V+ R ++ R + +V E L PS L DFL+R++ + + Q+
Sbjct: 67 ----SDFIVKYRGVSYGPGRPELRLVMEYL-PSGCLRDFLQRHR-ARLDASRLLLYSSQI 120
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ + Y+ R +H DL NIL+ S +K+ + + + LP +D
Sbjct: 121 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-------KLLP-------LDKD 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
S I + APE + +S D+WS G +L EL T
Sbjct: 167 XXVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE-------------- 181
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 182 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 237 YSNINNRDQIIFM 249
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 44/228 (19%)
Query: 74 MGEGTFGRVLECWDRQT-------QERVAIKVV-RSIRKYRD-----AAMIEIDVLQHLA 120
+G+GTF ++ + R+ + V +KV+ ++ R Y + A+M+ +HL
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
N G C N + F K G SL +LK+NK C + E +QL
Sbjct: 76 LN--YGVCVCGD-------ENILVQEFVKFG-SLDTYLKKNKNC-INILWKLEVAKQLAA 124
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
++ ++ + LIH ++ +NILL+ E K +G PF IKL D G +
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRK--------TGNPPF--------IKLSDPGIS 168
Query: 241 AFDNQNHSSIVSTR-HYRAPEVILG-LGWSYPCDMWSVGCILVELCTG 286
I+ R + PE I + D WS G L E+C+G
Sbjct: 169 I--TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 32/239 (13%)
Query: 73 KMGEGTFGRVLECWDRQTQERVA-----IKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G G FG V + + + + +K + +D + E +V+Q L
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ +W + + +LGP L +L++N++ + E Q+ + Y+ +
Sbjct: 436 IGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK--DKNIIELVHQVSMGMKYLEE 487
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
+H DL N+LLV+ + K+ + S K + + Q H
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLS----------------KALRADENYYKAQTH 531
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
+ APE I +S D+WS G ++ E G+ ++ + E AM+E+
Sbjct: 532 GKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 588
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE-------------- 173
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
K GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 174 KSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 229 YSNINNRDQIIFM 241
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 32/239 (13%)
Query: 73 KMGEGTFGRVLECWDRQTQERVA-----IKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G G FG V + + + + +K + +D + E +V+Q L
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
+ +W + + +LGP L +L++N++ + E Q+ + Y+ +
Sbjct: 437 IGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK--DKNIIELVHQVSMGMKYLEE 488
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
+H DL N+LLV+ + K+ + S K + + Q H
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLS----------------KALRADENYYKAQTH 532
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
+ APE I +S D+WS G ++ E G+ ++ + E AM+E+
Sbjct: 533 GKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 589
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 44/228 (19%)
Query: 74 MGEGTFGRVLECWDRQT-------QERVAIKVV-RSIRKYRD-----AAMIEIDVLQHLA 120
+G+GTF ++ + R+ + V +KV+ ++ R Y + A+M+ +HL
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
N G C N + F K G SL +LK+NK C + E +QL
Sbjct: 76 LN--YGVCFCGD-------ENILVQEFVKFG-SLDTYLKKNKNC-INILWKLEVAKQLAW 124
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
++ ++ + LIH ++ +NILL+ E K +G PF IKL D G +
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRK--------TGNPPF--------IKLSDPGIS 168
Query: 241 AFDNQNHSSIVSTR-HYRAPEVILG-LGWSYPCDMWSVGCILVELCTG 286
I+ R + PE I + D WS G L E+C+G
Sbjct: 169 I--TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 37/235 (15%)
Query: 67 RYKILSK--MGEGTFGRVL--ECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
R+ I+ K +GEG FG+V EC++ ++ + V++++ D A + L N
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 71
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL------------GPSLFDFLKRNKYCPFPVDL 170
+ H V+ + + +VFE + GP + N
Sbjct: 72 LQ--HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
+ +Q+ + Y+ +H DL N L+ + +K+ + S
Sbjct: 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR------------- 176
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D ST + +++ R + PE I+ ++ D+WS+G +L E+ T
Sbjct: 177 -----DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 35/228 (15%)
Query: 73 KMGEGTFGRVL--ECWD---RQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAK 121
++GEG FG+V EC + Q + VA+K ++ + R+A ++ + QH+ +
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 122 NDKGGSSHCVQIRNWFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQ 177
G + + F+Y H + GP P P+ L + Q
Sbjct: 108 F-FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + Y+ L +H DL N L+ +K+ + S D
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR------------------DI 208
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
ST + +++ R + PE IL ++ D+WS G +L E+ T
Sbjct: 209 YSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
+K GEG FG V + + T VA+K + AAM++I Q + K
Sbjct: 28 NKXGEGGFGVVYKGYVNNT--TVAVKKL--------AAMVDITTEELKQQFDQEIKVXAK 77
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
+ V++ + + +C+V+ SL D L + P + + +
Sbjct: 78 CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
++H+ IH D+K NILL + K+ + + + E + +
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX-------------- 183
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
S IV T Y APE + G + D++S G +L+E+ TG
Sbjct: 184 -----SRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 35/228 (15%)
Query: 73 KMGEGTFGRVL--ECWD---RQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAK 121
++GEG FG+V EC + Q + VA+K ++ + R+A ++ + QH+ +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 122 NDKGGSSHCVQIRNWFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQ 177
G + + F+Y H + GP P P+ L + Q
Sbjct: 85 F-FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + Y+ L +H DL N L+ +K+ + S D
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR------------------DI 185
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
ST + +++ R + PE IL ++ D+WS G +L E+ T
Sbjct: 186 YSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ RQ + + Y+H +IH DLK NI L +K+ + ++ KS
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE---------KSRW- 157
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEAL 289
GS F+ + S + + APEVI +S+ D+++ G +L EL TG+
Sbjct: 158 ----SGSHQFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
Query: 290 FQTHENLEHLAMM 302
+ N + + M
Sbjct: 209 YSNINNRDQIIFM 221
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 35/228 (15%)
Query: 73 KMGEGTFGRVL--ECWD---RQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAK 121
++GEG FG+V EC + Q + VA+K ++ + R+A ++ + QH+ +
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 122 NDKGGSSHCVQIRNWFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQ 177
G + + F+Y H + GP P P+ L + Q
Sbjct: 79 F-FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+ + Y+ L +H DL N L+ +K+ + S D
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR------------------DI 179
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
ST + +++ R + PE IL ++ D+WS G +L E+ T
Sbjct: 180 YSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 61/260 (23%)
Query: 52 REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYR 106
++GH+ + GE + +L ++G+G+FG V E R + + RVA+K V R
Sbjct: 2 KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 107 DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------ 159
+ I+ L + H V++ +V E + L +L+
Sbjct: 62 E----RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 117
Query: 160 -RNKYCPFP-VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
N P P + + + ++ + +AY++ + +H DL N +V+ +F
Sbjct: 118 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNC-MVAHDF---------- 166
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------------APEVILGL 265
+K+ DFG T I T +YR APE +
Sbjct: 167 -------------TVKIGDFGMT-------RDIYETDYYRKGGKGLLPVRWMAPESLKDG 206
Query: 266 GWSYPCDMWSVGCILVELCT 285
++ DMWS G +L E+ +
Sbjct: 207 VFTTSSDMWSFGVVLWEITS 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 92/233 (39%), Gaps = 37/233 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 73
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H DL N ++ +K+ + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------------- 178
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D TA+ + ++ R + APE + ++ DMWS G +L E+ +
Sbjct: 179 ---DIYETAYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 109
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 110 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 158
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 159 -------KALRADENXYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 210 YGQKPYRGMKGSEVTAMLEKG 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 123
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 124 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 172
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 173 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 224 YGQKPYRGMKGSEVTAMLEKG 244
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 125
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 126 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 174
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 175 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 226 YGQKPYRGMKGSEVTAMLEKG 246
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 125
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 126 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 174
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 175 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 226 YGQKPYRGMKGSEVTAMLEKG 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 33/151 (21%)
Query: 143 ICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPEN 199
+ I E SL F K+ +K P D++ + +++++ ++H L +IH D+KP N
Sbjct: 108 VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 167
Query: 200 ILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYR 257
+L+ ++ G+ +K DFG + + D+ + Y
Sbjct: 168 VLI-------------NALGQ-----------VKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 258 APEVI----LGLGWSYPCDMWSVGCILVELC 284
APE I G+S D+WS+G +EL
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 115
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 116 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 164
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 165 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 216 YGQKPYRGMKGSEVTAMLEKG 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 34/219 (15%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G FG V + E V I V + + + ++L GS + ++
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 134 RNWFDYRNHICI-----VFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
IC+ + +L P L D ++ N+ DL+ + Q+ + ++Y+
Sbjct: 85 LG-------ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLL-NWCMQIAKGMSYLE 136
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
D+RL+H DL N+L+ S +K+ + + +L+D T +
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLA----------------RLLDIDETEYHADG 180
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + A E IL +++ D+WS G + EL T
Sbjct: 181 GKVPI---KWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 103
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 104 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 152
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 153 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 204 YGQKPYRGMKGSEVTAMLEKG 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 109
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 110 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 158
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 159 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 210 YGQKPYRGMKGSEVTAMLEKG 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
+D + E +V+Q L + +W + + +LGP L +L++N++
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICEAESWM-----LVMEMAELGP-LNKYLQQNRHVK 105
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
+ E Q+ + Y+ + +H DL N+LLV+ + K+ + S
Sbjct: 106 DKN--IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS--------- 154
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LC 284
K + + Q H + APE I +S D+WS G ++ E
Sbjct: 155 -------KALRADENYYKAQTHGKW--PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 285 TGEALFQTHENLEHLAMMERA 305
G+ ++ + E AM+E+
Sbjct: 206 YGQKPYRGMKGSEVTAMLEKG 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 38/230 (16%)
Query: 73 KMGEGTFGRVL--ECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
++GEG FG+V EC++ + + V++++ AA + L N + H
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEHI 79
Query: 131 VQIRNWFDYRNHICIVFEKL------------GPS---LFDFLKRNKYCPFPVDLVREFG 175
V+ + + +VFE + GP L D R + +
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
Q+ + Y+ +H DL N L+ ++ +K+ + S
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR------------------ 181
Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D ST + +++ R + PE I+ ++ D+WS G IL E+ T
Sbjct: 182 DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 46/239 (19%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR--DAAMIEIDVLQHLAKNDKGGSSHCV 131
+G+G V ++T + AIKV +I R D M E +VL+ L +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN---IVKLF 73
Query: 132 QIRNWFDYRNHICIV-FEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDL 188
I R+ + I+ F G SL+ L+ N Y P EF L + V M+ L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCG-SLYTVLEEPSNAYG-LPES---EFLIVLRDVVGGMNHL 128
Query: 189 R---LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST--AFD 243
R ++H ++KP NI+ V E S KL DFG+ D
Sbjct: 129 RENGIVHRNIKPGNIMRVIGE--------------------DGQSVYKLTDFGAARELED 168
Query: 244 NQNHSSIVSTRHYRAPEV----IL----GLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
++ S+ T Y P++ +L + D+WS+G TG F+ E
Sbjct: 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 60/240 (25%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E VA+K+++ R+A M E+ VL +L G
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL-----GN 85
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR-------NKYCP---------FPVD 169
+ V + ++ E L +FL+R +K P ++
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH DL NILL
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI---------------------- 183
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
K+ DFG A D +N S+ V + R APE I +++ D+WS G L EL
Sbjct: 184 --TKICDFG-LARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 60/240 (25%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E VA+K+++ R+A M E+ VL +L G
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL-----GN 101
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR-------NKYCP---------FPVD 169
+ V + ++ E L +FL+R +K P ++
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH DL NILL
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI---------------------- 199
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
K+ DFG A D +N S+ V + R APE I +++ D+WS G L EL
Sbjct: 200 --TKICDFG-LARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 20 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 79 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 135
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 135 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTXTAH 170
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
Query: 301 MMERALG 307
MER G
Sbjct: 231 RMERPEG 237
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 44/248 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRN--HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
+ +I I F G +L D+L+ ++ Q+ ++ Y+
Sbjct: 74 LLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQN 246
IH DL N L+ GE + +K+ DFG T
Sbjct: 133 IHRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTA 168
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHL 299
H+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
Query: 300 AMMERALG 307
MER G
Sbjct: 229 YRMERPEG 236
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 21 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 80 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 136
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 134 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 301 MMERALG 307
MER G
Sbjct: 230 RMERPEG 236
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 60/240 (25%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E VA+K+++ R+A M E+ VL +L G
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL-----GN 108
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR-------NKYCP---------FPVD 169
+ V + ++ E L +FL+R +K P ++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH DL NILL
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI---------------------- 206
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
K+ DFG A D +N S+ V + R APE I +++ D+WS G L EL
Sbjct: 207 --TKICDFG-LARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 60/240 (25%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E VA+K+++ R+A M E+ VL +L G
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL-----GN 103
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR-------NKYCP---------FPVD 169
+ V + ++ E L +FL+R +K P ++
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH DL NILL
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI---------------------- 201
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
K+ DFG A D +N S+ V + R APE I +++ D+WS G L EL
Sbjct: 202 --TKICDFG-LARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 23 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 82 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 138
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 46 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 105 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 161
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 34/240 (14%)
Query: 73 KMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDA--AMIEIDVLQHLAKNDKGGSS 128
++G G FG V + R + Q VAIKV++ + D M E ++ L +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL------DNP 70
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ V++ + ++ G L FL KR + PV V E Q+ + Y+
Sbjct: 71 YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLE 127
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ +H DL N+LLV+ + K+ + S + G+
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA------------------LGADDSYYTA 169
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
S+ + APE I +S D+WS G + E L G+ ++ + E +A +E+
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 36/169 (21%)
Query: 154 LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY 213
L F++ + P DL+ FG Q+ + Y+ + + +H DL N +
Sbjct: 110 LLQFIRSPQRNPTVKDLI-SFGLQVARGMEYLAEQKFVHRDLAARNCM------------ 156
Query: 214 KRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSIVSTRHYRAP------EVILGLG 266
L +S +K+ DFG + ++ + S+ RH R P E +
Sbjct: 157 ------------LDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 267 WSYPCDMWSVGCILVELCTGEALFQTHE---NLEHLAMMERALGPLPEH 312
++ D+WS G +L EL T A H +L H R L P PE+
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL-PQPEY 252
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 15 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 74 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 130
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 77 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 133
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 44/248 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 133 IRNWFDYRN--HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
+ +I I F G +L D+L+ ++ Q+ ++ Y+
Sbjct: 79 LLGVCTREPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQN 246
IH DL N L+ GE + +K+ DFG T
Sbjct: 138 IHRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTA 173
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHL 299
H+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
Query: 300 AMMERALG 307
MER G
Sbjct: 234 YRMERPEG 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
N + I+ E LG L FL+ KY L+ + QL ++AY+ R +
Sbjct: 77 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLIL-YAYQLSTALAYLESKRFV 133
Query: 192 HTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 139 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 174
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 301 MMERALG 307
MER G
Sbjct: 235 RMERPEG 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 61/245 (24%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 73
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H DL N +V+ +F +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNC-MVAHDF-----------------------TV 169
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------------APEVILGLGWSYPCDMWSVGCIL 280
K+ DFG T I T +YR APE + ++ DMWS G +L
Sbjct: 170 KIGDFGMT-------RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 281 VELCT 285
E+ +
Sbjct: 223 WEITS 227
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 134 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 301 MMERALG 307
MER G
Sbjct: 230 RMERPEG 236
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 139 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTXTAH 174
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 301 MMERALG 307
MER G
Sbjct: 235 RMERPEG 241
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 134 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 301 MMERALG 307
MER G
Sbjct: 230 RMERPEG 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 34/240 (14%)
Query: 73 KMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDA--AMIEIDVLQHLAKNDKGGSS 128
++G G FG V + R + Q VAIKV++ + D M E ++ L +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL------DNP 396
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAYMH 186
+ V++ + ++ G L FL KR + PV V E Q+ + Y+
Sbjct: 397 YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLE 453
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
+ +H +L N+LLV+ + K+ + S + G+
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLSKA------------------LGADDSYYTA 495
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
S+ + APE I +S D+WS G + E L G+ ++ + E +A +E+
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 555
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 37/233 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 70
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H DL N ++ +K+ + +
Sbjct: 131 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------------- 175
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D T + ++ R + APE + ++ DMWS G +L E+ +
Sbjct: 176 ---DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 37/233 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 73
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H DL N ++ +K+ + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------------- 178
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D T + ++ R + APE + ++ DMWS G +L E+ +
Sbjct: 179 ---DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 77
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 138 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 173
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 233
Query: 301 MMERALG 307
MER G
Sbjct: 234 RMERPEG 240
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 37/233 (15%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 73
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H DL N ++ +K+ + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------------- 178
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
D T + ++ R + APE + ++ DMWS G +L E+ +
Sbjct: 179 ---DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 139 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 174
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 301 MMERALG 307
MER G
Sbjct: 235 RMERPEG 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 139 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 174
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 234
Query: 301 MMERALG 307
MER G
Sbjct: 235 RMERPEG 241
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 86
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 147 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 182
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 242
Query: 301 MMERALG 307
MER G
Sbjct: 243 RMERPEG 249
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 136 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 171
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 301 MMERALG 307
MER G
Sbjct: 232 RMERPEG 238
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 136 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 171
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 301 MMERALG 307
MER G
Sbjct: 232 RMERPEG 238
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 134 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 301 MMERALG 307
MER G
Sbjct: 230 RMERPEG 236
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 398 IGEGQFGDVHQGI-YMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYMHDLR 189
N + I+ E LG L FL+ K F +DL + QL ++AY+ R
Sbjct: 457 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKR 511
Query: 190 LIHTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
+H D+ N+L+ S++ +KL Y ++S G++P + + S
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 134 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 301 MMERALG 307
MER G
Sbjct: 230 RMERPEG 236
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 44/238 (18%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR--DAAMIEIDVLQHLAKNDKGGSSHCV 131
+G+G V ++T + AIKV +I R D M E +VL+ L +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN---IVKLF 73
Query: 132 QIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDLR 189
I R+ + I+ SL+ L+ N Y P EF L + V M+ LR
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPES---EFLIVLRDVVGGMNHLR 129
Query: 190 ---LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST--AFDN 244
++H ++KP NI+ V E S KL DFG+ D+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGE--------------------DGQSVYKLTDFGAARELEDD 169
Query: 245 QNHSSIVSTRHYRAPEV----IL----GLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
+ + T Y P++ +L + D+WS+G TG F+ E
Sbjct: 170 EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 280
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H +L N L+ GE + +K+ DFG T H
Sbjct: 341 HRNLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 376
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 436
Query: 301 MMERALG 307
MER G
Sbjct: 437 RMERPEG 443
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 23/113 (20%)
Query: 181 SVAYMHD---LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+AY+HD ++IH D+K NILL EF + G KL+D+
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILL-DEEFEAVVG---------------DFGLAKLMDY 194
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
D ++ T + APE + S D++ G +L+EL TG+ F
Sbjct: 195 K----DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 92/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G FG V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 132 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTXTAH 167
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G Q +E LE
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 301 MMERALG 307
MER G
Sbjct: 228 RMERPEG 234
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
H DL N L+ GE + +K+ DFG S +++
Sbjct: 136 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAP 171
Query: 251 VSTRH---YRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 301 MMERALG 307
MER G
Sbjct: 232 RMERPEG 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
H DL N L+ GE + +K+ DFG S +++
Sbjct: 135 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAP 170
Query: 251 VSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
Query: 301 MMERALG 307
MER G
Sbjct: 231 RMERPEG 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 277
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H +L N L+ GE + +K+ DFG T H
Sbjct: 338 HRNLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 373
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 433
Query: 301 MMERALG 307
MER G
Sbjct: 434 RMERPEG 440
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 319
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H +L N L+ GE + +K+ DFG T H
Sbjct: 380 HRNLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTYTAH 415
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q +E LE
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 475
Query: 301 MMERALG 307
MER G
Sbjct: 476 RMERPEG 482
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYMHDLR 189
N + I+ E LG L FL+ K F +DL + QL ++AY+ R
Sbjct: 77 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKR 131
Query: 190 LIHTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
+H D+ N+L+ +++ +KL Y ++S G++P + + S
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 398 IGEGQFGDVHQGI-YMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYMHDLR 189
N + I+ E LG L FL+ K F +DL + QL ++AY+ R
Sbjct: 457 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKR 511
Query: 190 LIHTDLKPENILLVSSEFIKL-----------PGYKRSSSGEMPFRCLPKSS 230
+H D+ N+L+ +++ +KL Y ++S G++P + + S
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 61/245 (24%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 74
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H +L N + V+ +F +
Sbjct: 135 QMAAEIADGMAYLNAKKFVHRNLAARNCM-VAHDF-----------------------TV 170
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------------APEVILGLGWSYPCDMWSVGCIL 280
K+ DFG T I T +YR APE + ++ DMWS G +L
Sbjct: 171 KIGDFGMT-------RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 223
Query: 281 VELCT 285
E+ +
Sbjct: 224 WEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 61/245 (24%)
Query: 67 RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
+ +L ++G+G+FG V E R + + RVA+K V R+ I+ L +
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE----RIEFLNEASV 73
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK-------RNKYCPFP-VDLVR 172
H V++ +V E + L +L+ N P P + +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
+ ++ + +AY++ + +H +L N + V+ +F +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRNLAARNCM-VAHDF-----------------------TV 169
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------------APEVILGLGWSYPCDMWSVGCIL 280
K+ DFG T I T +YR APE + ++ DMWS G +L
Sbjct: 170 KIGDFGMT-------RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 281 VELCT 285
E+ +
Sbjct: 223 WEITS 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 153 SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG 212
SL FLK+N F V + R + + Y+ D+ +H DL NIL+ S+
Sbjct: 109 SLDTFLKKND-GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSN------- 160
Query: 213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HYRAPEVILGLG 266
C K+ DFG + + + +TR + APE I
Sbjct: 161 ----------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 267 WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA 305
++ D+WS G ++ E+ + GE + N + + +E
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 43/243 (17%)
Query: 74 MGEGTFGRVLE-CWDRQTQERVAIKVVRSIRK-----YRDAAMIEIDVLQHLAKNDKGGS 127
+GEG FG V E + E++ + V++ +K ++ M E ++++L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNL------DH 84
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
H V++ + I+ L +L+RNK + LV + Q+ +++AY+
Sbjct: 85 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLES 143
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
+ +H D+ NIL+ S E +KL DFG S ++++
Sbjct: 144 INCVHRDIAVRNILVASPE------------------------CVKLGDFGLSRYIEDED 179
Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
+ TR + +PE I ++ D+W + E+ + G+ F EN + + ++
Sbjct: 180 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 239
Query: 303 ERA 305
E+
Sbjct: 240 EKG 242
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 92/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 132 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTXTAH 167
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G Q +E LE
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 301 MMERALG 307
MER G
Sbjct: 228 RMERPEG 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 43/243 (17%)
Query: 74 MGEGTFGRVLE-CWDRQTQERVAIKVVRSIRK-----YRDAAMIEIDVLQHLAKNDKGGS 127
+GEG FG V E + E++ + V++ +K ++ M E ++++L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNL------DH 72
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
H V++ + I+ L +L+RNK + LV + Q+ +++AY+
Sbjct: 73 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLES 131
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
+ +H D+ NIL+ S E +KL DFG S ++++
Sbjct: 132 INCVHRDIAVRNILVASPE------------------------CVKLGDFGLSRYIEDED 167
Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
+ TR + +PE I ++ D+W + E+ + G+ F EN + + ++
Sbjct: 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 227
Query: 303 ERA 305
E+
Sbjct: 228 EKG 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 76/250 (30%)
Query: 74 MGEGTFGRVLEC----WDRQTQERV---AIKVVRSIRKYRDAA--MIEIDVLQHLAK--N 122
+GEG FG+V+ D+ RV A+K+++S +D + + E+++++ + K N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNK-----YCPFPV--------- 168
C Q D ++ + + G +L ++L+ + YC P
Sbjct: 81 IINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 169 -DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKR 215
DLV Q+ + Y+ + IH DL N+L+ +K+ YK+
Sbjct: 135 KDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
+++G +P + + APE + +++ D+WS
Sbjct: 194 TTNGRLPVK-------------------------------WMAPEALFDRIYTHQSDVWS 222
Query: 276 VGCILVELCT 285
G +L E+ T
Sbjct: 223 FGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 76/250 (30%)
Query: 74 MGEGTFGRVLEC----WDRQTQERV---AIKVVRSIRKYRDAA--MIEIDVLQHLAK--N 122
+GEG FG+V+ D+ RV A+K+++S +D + + E+++++ + K N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNK-----YCPFPV--------- 168
C Q D ++ + + G +L ++L+ + YC P
Sbjct: 96 IINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 169 -DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKR 215
DLV Q+ + Y+ + IH DL N+L+ +K+ YK+
Sbjct: 150 KDLV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
+++G +P + + APE + +++ D+WS
Sbjct: 209 TTNGRLPVK-------------------------------WMAPEALFDRIYTHQSDVWS 237
Query: 276 VGCILVELCT 285
G +L E+ T
Sbjct: 238 FGVLLWEIFT 247
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 86/239 (35%), Gaps = 58/239 (24%)
Query: 74 MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
+G G FG+V+E VA+K+++ R+A M E+ VL +L G
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL-----GN 108
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR-------NKYCP---------FPVD 169
+ V + ++ E L +FL+R +K P ++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
+ F Q+ + +A++ IH DL NILL
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI---------------------- 206
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTR-----HYRAPEVILGLGWSYPCDMWSVGCILVEL 283
K+ DFG + + +V + APE I +++ D+WS G L EL
Sbjct: 207 --TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 43/243 (17%)
Query: 74 MGEGTFGRVLE-CWDRQTQERVAIKVVRSIRK-----YRDAAMIEIDVLQHLAKNDKGGS 127
+GEG FG V E + E++ + V++ +K ++ M E ++++L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNL------DH 68
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
H V++ + I+ L +L+RNK + LV + Q+ +++AY+
Sbjct: 69 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLES 127
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
+ +H D+ NIL+ S E +KL DFG S ++++
Sbjct: 128 INCVHRDIAVRNILVASPE------------------------CVKLGDFGLSRYIEDED 163
Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
+ TR + +PE I ++ D+W + E+ + G+ F EN + + ++
Sbjct: 164 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 223
Query: 303 ERA 305
E+
Sbjct: 224 EKG 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 91/250 (36%), Gaps = 44/250 (17%)
Query: 69 KILSKMGEGTFGRVLECWDRQTQER---VAIKVVRS--IRKYRDAAMIEIDVLQHLAKND 123
KI +G G FG V + +R VAIK ++S K R + E ++
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH-- 93
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
+ + + + I+ E + D R F V + R + +
Sbjct: 94 ----PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
Y+ D+ +H DL NIL+ S+ C K+ DFG + F
Sbjct: 150 YLADMNYVHRDLAARNILVNSN-----------------LVC-------KVSDFGLSRFL 185
Query: 244 NQNHSSIVSTR--------HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHE 294
+ S T + APE I ++ D+WS G ++ E+ + GE +
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 245
Query: 295 NLEHLAMMER 304
N + + +E+
Sbjct: 246 NQDVINAIEQ 255
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+GEG FG V + + E A+ V K + + LQ + H V++
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 134 RNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYMHDLR 189
N + I+ E LG L FL+ K F +DL + QL ++AY+ R
Sbjct: 77 IGVIT-ENPVWIIMELCTLG-ELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKR 131
Query: 190 LIHTDLKPENILLVSSEFIKLPGY-----------KRSSSGEMPFRCLPKSS 230
+H D+ N+L+ S++ +KL + ++S G++P + + S
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 169
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 170 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 169
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 170 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 30/218 (13%)
Query: 74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
+G G FG V + + + + + V K +D L + + +++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 134 RNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHT 193
+ I+ E + D R K F V + R + + Y+ ++ +H
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVST 253
DL NIL+ S+ C K+ DFG + + + +T
Sbjct: 172 DLAARNILVNSN-----------------LVC-------KVSDFGLSRVLEDDPEATYTT 207
Query: 254 R------HYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ APE I ++ D+WS G ++ E+ T
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 174
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 175 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 169
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 170 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 167
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 168 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 32/160 (20%)
Query: 153 SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG 212
SL FL++N + LV R + + Y+ D+ +H DL NIL+ S+ K+
Sbjct: 101 SLDAFLRKNDGRFTVIQLVGML-RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVS- 158
Query: 213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HYRAPEVILGLG 266
DFG + + + +TR + APE I
Sbjct: 159 -----------------------DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 267 WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA 305
++ D+WS G ++ E+ + GE + N + + +E
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 74
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 135 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 170
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 171 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ + + Y+ D RL+H DL N+L+ + + +K+ + R+ KL+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA----------------KLL- 171
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 172 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
P ++ + + Q+ + ++ + IH DL NILL
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILL---------------------- 232
Query: 225 CLPKSSAIKLIDFG--STAFDNQNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCI 279
+++ +K+ DFG + N ++ TR + APE I +S D+WS G +
Sbjct: 233 --SENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVL 290
Query: 280 LVEL 283
L E+
Sbjct: 291 LWEI 294
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 81
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 142 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 177
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 178 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 230
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 231 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 78
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 79 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 139 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 174
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 175 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 227
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 228 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 255
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 141 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 176
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 177 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 230 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 87
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 148 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 183
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 184 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 237 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 77
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNK--------YCPFPVDLVREFGRQL 178
H V++ ++ E + L +L+ + P + + + ++
Sbjct: 78 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 138 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 173
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 174 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 226
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 227 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 32/160 (20%)
Query: 153 SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG 212
SL FL++N + LV R + + Y+ D+ +H DL NIL+ S+ K+
Sbjct: 95 SLDAFLRKNDGRFTVIQLVGML-RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVS- 152
Query: 213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HYRAPEVILGLG 266
DFG + + + +TR + APE I
Sbjct: 153 -----------------------DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 267 WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA 305
++ D+WS G ++ E+ + GE + N + + +E
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 109
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 110 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 170 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 205
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 206 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 259 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 87
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR------NKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 148 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 183
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 184 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 237 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N +V+ +F +K+ DFG
Sbjct: 141 ADGMAYLNANKFVHRDLAARNC-MVAEDF-----------------------TVKIGDFG 176
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 177 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 230 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 153 SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG 212
SL FL++N + LV R + + Y+ D+ +H DL NI LV+S +
Sbjct: 116 SLDAFLRKNDGRFTVIQLVGML-RGIGSGMKYLSDMSAVHRDLAARNI-LVNSNLV---- 169
Query: 213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HYRAPEVILGLG 266
K+ DFG + + + +TR + APE I
Sbjct: 170 -------------------CKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 267 WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA 305
++ D+WS G ++ E+ + GE + N + + +E
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 92/247 (37%), Gaps = 42/247 (17%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V E ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 71
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ I+ E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 132 HRDLAARNCLV----------------GE--------NHLVKVADFGLSRLMTGDTFTAH 167
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G Q +E LE
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 301 MMERALG 307
MER G
Sbjct: 228 RMERPEG 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 23/113 (20%)
Query: 181 SVAYMHD---LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
+AY+HD ++IH D+K NILL EF + G KL+D+
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILL-DEEFEAVVG---------------DFGLAKLMDY 186
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
D ++ + APE + S D++ G +L+EL TG+ F
Sbjct: 187 K----DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 92 VMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ K+ DFG + + + +TR +
Sbjct: 152 NSNLVCKVS------------------------DFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 32/123 (26%)
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
DL+ F Q+ + + Y+ +++L+H DL NIL+ +
Sbjct: 151 DLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVA------------------------E 185
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAP------EVILGLGWSYPCDMWSVGCILVE 282
+K+ DFG + D S V R P E + ++ D+WS G +L E
Sbjct: 186 GRKMKISDFGLSR-DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 283 LCT 285
+ T
Sbjct: 245 IVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 32/123 (26%)
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
DL+ F Q+ + + Y+ +++L+H DL NIL+ +
Sbjct: 151 DLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVA------------------------E 185
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAP------EVILGLGWSYPCDMWSVGCILVE 282
+K+ DFG + D S V R P E + ++ D+WS G +L E
Sbjct: 186 GRKMKISDFGLSR-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 283 LCT 285
+ T
Sbjct: 245 IVT 247
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 119 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 178
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 179 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 215 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 94/251 (37%), Gaps = 42/251 (16%)
Query: 73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
K+G G +G V ++ VA+K ++ D +E + L+ A + + VQ
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVE-EFLKEAAVMKEIKHPNLVQ 92
Query: 133 IRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
+ IV E + +L D+L+ ++ Q+ ++ Y+ I
Sbjct: 93 LLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----STAFDNQNH 247
H DL N L+ GE + +K+ DFG T H
Sbjct: 153 HRDLAARNCLV----------------GE--------NHVVKVADFGLSRLMTGDTYTAH 188
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-------GEALFQTHENLEHLA 300
+ + APE + +S D+W+ G +L E+ T G L Q ++ LE
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY 248
Query: 301 MMERALGPLPE 311
ME+ G P+
Sbjct: 249 RMEQPEGCPPK 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 109 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 168
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + + +TR +
Sbjct: 169 NSN-----------------LVC-------KVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 204
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 31/170 (18%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NI L
Sbjct: 119 VMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNI-L 177
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
V+S + K+ DFG + + ++ +T +
Sbjct: 178 VNSNLV-----------------------CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA 305
APE I ++ D+WS G ++ E+ + GE + N + + +E
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 271 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
Query: 285 T 285
T
Sbjct: 300 T 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 212 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
Query: 285 T 285
T
Sbjct: 241 T 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 35/147 (23%)
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
R + + Y+ ++ +H DL NI LV+S + K+
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNI-LVNSNLV-----------------------CKVS 160
Query: 236 DFGSTAFDNQNHSSIVSTRH--------YRAPEVILGLGWSYPCDMWSVGCILVELCT-G 286
DFG + F +N S T + APE I ++ D WS G ++ E+ + G
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 287 EALFQTHENLEHLAMMERA--LGPLPE 311
E + N + + +E+ L P P+
Sbjct: 221 ERPYWDMSNQDVINAIEQDYRLPPPPD 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 39/256 (15%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 81
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N ++ +K+ + + D
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIX 183
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
T + ++ R + +PE + ++ D+WS G +L E+ T E +Q N +
Sbjct: 184 ETDXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 298 HL-AMMERALGPLPEH 312
L +ME L P++
Sbjct: 243 VLRFVMEGGLLDKPDN 258
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
Q+ E + Y+ D RL+H DL N+L+ + + +K+ + + KL+
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA----------------KLL- 164
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
G+ + V + + A E IL +++ D+WS G + EL T
Sbjct: 165 -GAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 92 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ K+ DFG + + + +TR +
Sbjct: 152 NSNLVCKVS------------------------DFGLSRVLEDDPEAAYTTRGGKIPIRW 187
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
QL + Y+ + IH DL N+L+ + +K+ + + I ID
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD-------------INNID 211
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
+ + N + + + APE + +++ D+WS G ++ E+ T
Sbjct: 212 Y----YKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 214 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
Query: 285 T 285
T
Sbjct: 243 T 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +K+ YK++++G +P +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 217 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
Query: 285 T 285
T
Sbjct: 246 T 246
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 39/256 (15%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 72
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 73 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N ++ +K+ + + D
Sbjct: 133 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR------------------DIX 174
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
T + ++ R + +PE + ++ D+WS G +L E+ T E +Q N +
Sbjct: 175 ETDXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 233
Query: 298 HL-AMMERALGPLPEH 312
L +ME L P++
Sbjct: 234 VLRFVMEGGLLDKPDN 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 31/168 (18%)
Query: 145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS 204
IV E + D R F + + R + + Y+ DL +H DL N+L+ S
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
Query: 205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSIVSTR-----HYRA 258
+ C K+ DFG S ++ ++ +T + A
Sbjct: 187 N-----------------LVC-------KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 259 PEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
PE I +S D+WS G ++ E L GE + N + ++ +E
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 31/168 (18%)
Query: 145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS 204
IV E + D R F + + R + + Y+ DL +H DL N+L+ S
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
Query: 205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSIVSTR-----HYRA 258
+ C K+ DFG S ++ ++ +T + A
Sbjct: 187 N-----------------LVC-------KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 259 PEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERA 305
PE I +S D+WS G ++ E L GE + N + ++ +E
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 87/239 (36%), Gaps = 54/239 (22%)
Query: 69 KILSKMGEGTFGRVLECWDRQT-QERVAIKVV---------RSIRKYRDAAMIEIDVLQH 118
++L G FG V W Q E VA+K+ Y M ++LQ
Sbjct: 27 QLLEVKARGRFGCV---WKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQF 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN-----KYCPFPVDLVRE 173
+ +G S V + W + F + G SL DFLK N + C + R
Sbjct: 84 IGAEKRGTS---VDVDLW------LITAFHEKG-SLSDFLKANVVSWNELCHIAETMARG 133
Query: 174 FG--RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
+ + + H + H D+K +N+LL ++ C+
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN----------------LTACIADFGL 177
Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCT 285
+ G +A D V TR Y APEV+ G DM+++G +L EL +
Sbjct: 178 ALKFEAGKSAGDTHGQ---VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 63/268 (23%)
Query: 73 KMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
++G+G+FG V E + + + RVAIK V R+ I+ L + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE----RIEFLNEASVMKEFNC 74
Query: 128 SHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLK------RNKYCPFPVDLVR--EFGRQL 178
H V++ ++ E + L +L+ N P L + + ++
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
+ +AY++ + +H DL N V+ +F +K+ DFG
Sbjct: 135 ADGMAYLNANKFVHRDLAARNC-XVAEDF-----------------------TVKIGDFG 170
Query: 239 STAFDNQNHSSIVSTRHYR-APEVILGLGWSYP-----------CDMWSVGCILVELCT- 285
T I T +YR + +L + W P D+WS G +L E+ T
Sbjct: 171 MT-------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223
Query: 286 GEALFQTHENLEHL-AMMERALGPLPEH 312
E +Q N + L +ME L P++
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 35/147 (23%)
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
R + + Y+ ++ +H DL NIL V+S + K+
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNIL-VNSNLV-----------------------CKVS 158
Query: 236 DFGSTAFDNQNHSSIVSTRH--------YRAPEVILGLGWSYPCDMWSVGCILVELCT-G 286
DFG + F +N S T + APE I ++ D WS G ++ E+ + G
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 287 EALFQTHENLEHLAMMERA--LGPLPE 311
E + N + + +E+ L P P+
Sbjct: 219 ERPYWDMSNQDVINAIEQDYRLPPPPD 245
>pdb|1CUZ|A Chain A, Cutinase, L81g, L182g Mutant
Length = 214
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 268 SYPCDMWSVGCILVEL-CTGEALFQTHENLEHLAMMERALGPLPEHMIR--RASRGT 321
+YP D V C +L CTG + HLA A GP PE +I RA RG+
Sbjct: 161 NYPADRTKVFCNTGDLVCTGSGIVAA----PHLAYGPDARGPAPEFLIEKVRAVRGS 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 65/254 (25%)
Query: 66 PRYKI--LSKMGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQH 118
PR I + +GEG FGRV + + VA+K++ K +A ++ D +
Sbjct: 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML----KEEASADMQADFQRE 100
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKR---NKYC---------- 164
A + + + V++ +C++FE + L +FL+ + C
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 165 -------PFPVDLVREF--GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR 215
P P+ + RQ+ +AY+ + + +H DL N L+
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV------------- 207
Query: 216 SSSGEMPFRCLPKSSAIKLIDFG------STAFDNQNHSSIVSTRHYRAPEVILGLGWSY 269
GE + +K+ DFG S + + + + R + PE I ++
Sbjct: 208 ---GE--------NMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTT 255
Query: 270 PCDMWSVGCILVEL 283
D+W+ G +L E+
Sbjct: 256 ESDVWAYGVVLWEI 269
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA----- 183
H V + + D RN + ++++ + LKR+ Y + + ++L +
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENG---NLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 184 -YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
Y+H +IH D+K NILL + K+ + S G T
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG--------------------TEL 192
Query: 243 DNQNHSSIV-STRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQT 292
D + +V T Y PE + + D++S G +L E LC A+ Q+
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 31/115 (26%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
QL + Y+ + IH DL N+L+ +++ +K+ D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVT------------------------ENNVMKIAD 200
Query: 237 FGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
FG A D N T + R APE + +++ D+WS G ++ E+ T
Sbjct: 201 FG-LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 31/115 (26%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
QL + Y+ + IH DL N+L+ +++ +K+ D
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVT------------------------ENNVMKIAD 200
Query: 237 FGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
FG A D N T + R APE + +++ D+WS G ++ E+ T
Sbjct: 201 FG-LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 88/231 (38%), Gaps = 21/231 (9%)
Query: 71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
L +G G FG V + E + I V + + + V H+ +H
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 131 VQIRNWFDYRN-HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
V++ + + + LG SL D +++++ P L+ +G Q+ + + Y+ +
Sbjct: 78 VRLLGLCPGSSLQLVTQYLPLG-SLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEHG 135
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA---IKLIDFGSTAFDNQN 246
++H +L N+LL S +++ + + + L S A IK + S F
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
H S V WSY +W + E G L + + LE
Sbjct: 196 HQSDV---------------WSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
+ IV E + D R F V + R + + Y+ D+ +H DL NIL+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR------HY 256
S+ C K+ DFG + + +TR +
Sbjct: 181 NSN-----------------LVC-------KVSDFGLGRVLEDDPEAAYTTRGGKIPIRW 216
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCT 285
+PE I ++ D+WS G +L E+ +
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 39/240 (16%)
Query: 71 LSKMGEGTFGRVLE-CWDRQTQE---RVAIKVV--RSIRKYRDAA---MIEIDVLQHLAK 121
L +G G FG V + W + + V IKV+ +S R+ A M+ I L H
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH--- 92
Query: 122 NDKGGSSHCVQIRNWFDYRN-HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
+H V++ + + + LG SL D +++++ P L+ +G Q+ +
Sbjct: 93 ------AHIVRLLGLCPGSSLQLVTQYLPLG-SLLDHVRQHRGALGP-QLLLNWGVQIAK 144
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA---IKLIDF 237
+ Y+ + ++H +L N+LL S +++ + + + L S A IK +
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
S F H S V WSY +W + E G L + + LE
Sbjct: 205 ESIHFGKYTHQSDV---------------WSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP--CDMWSVGCILVELCTGEALF 290
K+ DFG++ + S ++ + APE I SY D +S IL + TGE F
Sbjct: 169 KVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
Query: 291 QTH 293
+
Sbjct: 229 DEY 231
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
Q+ + Y+ + IH DL N+L+ +K+ YK++++G +P +
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 209
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G +L E+
Sbjct: 210 -------------------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
Query: 285 T 285
T
Sbjct: 239 T 239
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 32/123 (26%)
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
DL+ F Q+ + + Y+ ++ L+H DL NIL+ +
Sbjct: 151 DLI-SFAWQISQGMQYLAEMSLVHRDLAARNILVA------------------------E 185
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAP------EVILGLGWSYPCDMWSVGCILVE 282
+K+ DFG + D S V R P E + ++ D+WS G +L E
Sbjct: 186 GRKMKISDFGLSR-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 283 LCT 285
+ T
Sbjct: 245 IVT 247
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 21/103 (20%)
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV 251
H DLKP NILL L G M C+ ++ A Q+ ++
Sbjct: 157 HRDLKPTNILLGDEGQPVL-----MDLGSMNQACIH-------VEGSRQALTLQDWAAQR 204
Query: 252 STRHYRAPEVILGLGWSYPC------DMWSVGCILVELCTGEA 288
T YRAPE+ C D+WS+GC+L + GE
Sbjct: 205 CTISYRAPEL---FSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
Q+ + Y+ + IH DL N+L+ +K+ YK++++G +P +
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 206
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G +L E+
Sbjct: 207 -------------------------------WMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
Query: 285 T 285
T
Sbjct: 236 T 236
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG------------YKRSSSGEMPFR 224
QL + Y+ + IH DL N+L+ + +++ YK++++G +P +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
+ APE + +++ D+WS G ++ E+
Sbjct: 225 -------------------------------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 285 T 285
T
Sbjct: 254 T 254
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,667,161
Number of Sequences: 62578
Number of extensions: 470853
Number of successful extensions: 4222
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 1189
Number of HSP's gapped (non-prelim): 1462
length of query: 399
length of database: 14,973,337
effective HSP length: 101
effective length of query: 298
effective length of database: 8,652,959
effective search space: 2578581782
effective search space used: 2578581782
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)