Query 015869
Match_columns 399
No_of_seqs 70 out of 72
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 03:56:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015869.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015869hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ma5_A Tetratricopeptide repea 97.0 0.0017 5.9E-08 49.2 6.5 57 334-390 21-77 (100)
2 1na3_A Designed protein CTPR2; 96.5 0.005 1.7E-07 43.5 5.9 50 334-383 23-72 (91)
3 2l6j_A TPR repeat-containing p 96.4 0.0039 1.3E-07 45.5 5.0 50 334-383 18-67 (111)
4 3sz7_A HSC70 cochaperone (SGT) 96.4 0.004 1.4E-07 50.0 5.4 49 336-384 61-109 (164)
5 2kc7_A BFR218_protein; tetratr 96.4 0.0058 2E-07 44.6 5.7 50 335-384 15-65 (99)
6 2kat_A Uncharacterized protein 96.3 0.0084 2.9E-07 45.3 6.4 56 334-389 33-88 (115)
7 1hxi_A PEX5, peroxisome target 96.3 0.0067 2.3E-07 47.7 5.9 85 299-383 18-114 (121)
8 2lni_A Stress-induced-phosphop 96.2 0.012 4.2E-07 43.5 6.8 63 319-384 52-114 (133)
9 3k9i_A BH0479 protein; putativ 96.2 0.0072 2.5E-07 46.3 5.6 50 334-383 41-90 (117)
10 3upv_A Heat shock protein STI1 96.2 0.0097 3.3E-07 45.3 5.9 50 335-384 53-102 (126)
11 3upv_A Heat shock protein STI1 96.1 0.0099 3.4E-07 45.3 5.9 50 334-383 18-67 (126)
12 2vyi_A SGTA protein; chaperone 96.1 0.013 4.4E-07 42.8 6.3 48 336-383 62-109 (131)
13 3vtx_A MAMA; tetratricopeptide 96.1 0.0074 2.5E-07 48.5 5.4 50 334-383 121-170 (184)
14 2kck_A TPR repeat; tetratricop 96.1 0.0093 3.2E-07 42.7 5.4 46 336-381 56-104 (112)
15 4gcn_A Protein STI-1; structur 96.1 0.013 4.4E-07 46.3 6.6 57 334-390 22-78 (127)
16 4ga2_A E3 SUMO-protein ligase 96.1 0.0099 3.4E-07 48.2 5.9 48 336-383 47-94 (150)
17 4gco_A Protein STI-1; structur 96.1 0.0098 3.4E-07 47.2 5.7 50 334-383 61-110 (126)
18 2dba_A Smooth muscle cell asso 96.0 0.012 4.1E-07 44.6 6.0 64 317-383 65-128 (148)
19 1hxi_A PEX5, peroxisome target 96.0 0.0042 1.4E-07 48.9 3.3 49 335-383 32-80 (121)
20 2xcb_A PCRH, regulatory protei 96.0 0.012 4.2E-07 46.5 5.9 76 309-384 29-116 (142)
21 3q49_B STIP1 homology and U bo 96.0 0.013 4.3E-07 44.5 5.7 75 312-386 23-109 (137)
22 2xcb_A PCRH, regulatory protei 95.9 0.015 5.2E-07 45.9 6.4 50 334-383 32-81 (142)
23 3q49_B STIP1 homology and U bo 95.8 0.017 5.8E-07 43.8 5.9 50 334-383 23-72 (137)
24 4gco_A Protein STI-1; structur 95.8 0.016 5.3E-07 46.1 5.9 50 334-383 27-76 (126)
25 1elw_A TPR1-domain of HOP; HOP 95.7 0.019 6.4E-07 41.3 5.6 48 336-383 54-101 (118)
26 2vgx_A Chaperone SYCD; alterna 95.7 0.02 6.7E-07 46.6 6.3 51 334-384 69-119 (148)
27 1elw_A TPR1-domain of HOP; HOP 95.7 0.013 4.6E-07 42.1 4.8 50 334-383 18-67 (118)
28 2xev_A YBGF; tetratricopeptide 95.7 0.014 4.9E-07 43.7 5.1 66 315-383 37-105 (129)
29 3gyz_A Chaperone protein IPGC; 95.7 0.02 6.9E-07 47.9 6.4 50 334-383 84-133 (151)
30 3sz7_A HSC70 cochaperone (SGT) 95.7 0.019 6.4E-07 46.0 5.9 67 314-383 8-74 (164)
31 2lni_A Stress-induced-phosphop 95.6 0.018 6.2E-07 42.6 5.3 50 334-383 30-79 (133)
32 2kat_A Uncharacterized protein 95.6 0.01 3.4E-07 44.8 3.9 47 338-384 3-49 (115)
33 3gyz_A Chaperone protein IPGC; 95.6 0.019 6.4E-07 48.1 5.9 63 318-383 37-99 (151)
34 2vgx_A Chaperone SYCD; alterna 95.6 0.02 6.8E-07 46.5 5.9 50 334-383 35-84 (148)
35 2xev_A YBGF; tetratricopeptide 95.6 0.019 6.5E-07 43.1 5.3 50 334-383 16-68 (129)
36 4ga2_A E3 SUMO-protein ligase 95.5 0.0085 2.9E-07 48.6 3.5 52 332-383 9-60 (150)
37 2fo7_A Synthetic consensus TPR 95.5 0.03 1E-06 40.6 6.0 50 334-383 83-132 (136)
38 2pl2_A Hypothetical conserved 95.5 0.021 7.1E-07 48.6 6.0 47 336-383 134-180 (217)
39 2vyi_A SGTA protein; chaperone 95.5 0.03 1E-06 40.8 5.9 67 314-383 9-75 (131)
40 1na0_A Designed protein CTPR3; 95.5 0.031 1.1E-06 40.4 5.9 49 335-383 58-106 (125)
41 1elr_A TPR2A-domain of HOP; HO 95.4 0.028 9.5E-07 41.1 5.6 53 335-387 19-71 (131)
42 3urz_A Uncharacterized protein 95.3 0.022 7.4E-07 48.2 5.4 50 334-383 68-117 (208)
43 1na0_A Designed protein CTPR3; 95.3 0.039 1.3E-06 39.9 5.9 50 334-383 23-72 (125)
44 1a17_A Serine/threonine protei 95.3 0.043 1.5E-06 42.3 6.5 48 336-383 63-110 (166)
45 3rkv_A Putative peptidylprolyl 95.2 0.035 1.2E-06 44.3 5.9 64 317-383 63-126 (162)
46 1a17_A Serine/threonine protei 95.1 0.039 1.3E-06 42.5 5.9 53 336-388 97-151 (166)
47 3vtx_A MAMA; tetratricopeptide 95.1 0.036 1.2E-06 44.4 5.8 50 334-383 19-68 (184)
48 2kck_A TPR repeat; tetratricop 95.1 0.033 1.1E-06 39.8 5.0 50 334-383 20-69 (112)
49 2dba_A Smooth muscle cell asso 95.1 0.038 1.3E-06 41.7 5.6 64 317-383 28-94 (148)
50 4i17_A Hypothetical protein; T 95.0 0.029 1E-06 46.7 5.3 63 318-383 43-105 (228)
51 2fo7_A Synthetic consensus TPR 95.0 0.057 1.9E-06 39.1 6.1 49 335-383 50-98 (136)
52 3qky_A Outer membrane assembly 94.9 0.037 1.3E-06 47.4 5.7 65 316-383 14-81 (261)
53 3gw4_A Uncharacterized protein 94.8 0.032 1.1E-06 44.7 4.8 58 334-391 121-184 (203)
54 2pl2_A Hypothetical conserved 94.8 0.042 1.4E-06 46.7 5.8 50 334-383 19-68 (217)
55 2e2e_A Formate-dependent nitri 94.8 0.021 7.2E-07 45.8 3.6 48 336-383 60-110 (177)
56 3k9i_A BH0479 protein; putativ 94.7 0.008 2.7E-07 46.0 1.0 48 336-383 6-56 (117)
57 3as5_A MAMA; tetratricopeptide 94.7 0.058 2E-06 41.6 5.9 51 334-384 124-174 (186)
58 2e2e_A Formate-dependent nitri 94.6 0.046 1.6E-06 43.8 5.3 47 337-383 98-144 (177)
59 3as5_A MAMA; tetratricopeptide 94.5 0.073 2.5E-06 41.0 5.9 50 334-383 90-139 (186)
60 2fbn_A 70 kDa peptidylprolyl i 94.4 0.066 2.3E-06 44.1 5.9 64 317-383 88-151 (198)
61 3fp2_A TPR repeat-containing p 94.4 0.024 8.3E-07 52.3 3.5 81 300-383 8-88 (537)
62 1xnf_A Lipoprotein NLPI; TPR, 94.3 0.06 2E-06 44.9 5.5 47 336-382 93-139 (275)
63 1hh8_A P67PHOX, NCF-2, neutrop 94.3 0.061 2.1E-06 43.8 5.4 50 334-383 51-100 (213)
64 2q7f_A YRRB protein; TPR, prot 94.2 0.023 7.8E-07 46.5 2.7 48 336-383 73-120 (243)
65 3urz_A Uncharacterized protein 94.2 0.042 1.4E-06 46.4 4.4 50 334-383 18-83 (208)
66 1xnf_A Lipoprotein NLPI; TPR, 94.2 0.095 3.2E-06 43.7 6.4 49 335-383 58-106 (275)
67 3nf1_A KLC 1, kinesin light ch 94.1 0.055 1.9E-06 45.6 4.8 81 304-387 14-102 (311)
68 3edt_B KLC 2, kinesin light ch 94.0 0.052 1.8E-06 44.8 4.5 69 316-387 84-160 (283)
69 2r5s_A Uncharacterized protein 94.0 0.054 1.9E-06 44.1 4.5 49 336-384 124-174 (176)
70 3uq3_A Heat shock protein STI1 94.0 0.093 3.2E-06 42.9 5.9 55 334-388 187-241 (258)
71 2vq2_A PILW, putative fimbrial 93.8 0.11 3.9E-06 41.5 5.9 47 336-382 58-105 (225)
72 1elr_A TPR2A-domain of HOP; HO 93.8 0.062 2.1E-06 39.2 4.1 50 334-383 52-108 (131)
73 2ho1_A Type 4 fimbrial biogene 93.8 0.061 2.1E-06 44.7 4.5 48 336-383 53-100 (252)
74 3rkv_A Putative peptidylprolyl 93.7 0.053 1.8E-06 43.3 3.9 49 335-383 26-92 (162)
75 3edt_B KLC 2, kinesin light ch 93.6 0.051 1.7E-06 44.9 3.6 53 334-386 141-201 (283)
76 3uq3_A Heat shock protein STI1 93.5 0.13 4.5E-06 42.1 5.9 50 334-383 153-202 (258)
77 2vq2_A PILW, putative fimbrial 93.4 0.12 4.2E-06 41.3 5.6 49 335-383 128-176 (225)
78 2q7f_A YRRB protein; TPR, prot 93.4 0.14 4.7E-06 41.8 5.9 72 312-383 71-154 (243)
79 2r5s_A Uncharacterized protein 93.4 0.12 4.2E-06 41.9 5.6 47 338-384 92-138 (176)
80 4eqf_A PEX5-related protein; a 93.4 0.11 3.9E-06 45.9 5.8 53 334-386 261-313 (365)
81 3bee_A Putative YFRE protein; 93.3 0.12 4E-06 40.5 5.1 48 336-383 25-72 (93)
82 2fbn_A 70 kDa peptidylprolyl i 93.2 0.22 7.5E-06 41.0 6.9 65 316-383 37-117 (198)
83 3u4t_A TPR repeat-containing p 93.1 0.16 5.5E-06 42.5 6.1 47 336-382 19-65 (272)
84 2c2l_A CHIP, carboxy terminus 93.0 0.12 3.9E-06 46.3 5.4 54 334-387 52-105 (281)
85 3qou_A Protein YBBN; thioredox 93.0 0.11 3.9E-06 46.3 5.3 45 339-383 204-248 (287)
86 1fch_A Peroxisomal targeting s 93.0 0.14 4.7E-06 44.8 5.6 54 334-387 265-318 (368)
87 4eqf_A PEX5-related protein; a 92.9 0.16 5.4E-06 44.9 5.9 58 334-391 113-170 (365)
88 3qky_A Outer membrane assembly 92.7 0.2 6.8E-06 42.8 6.2 68 316-383 88-177 (261)
89 1w3b_A UDP-N-acetylglucosamine 92.7 0.15 5.3E-06 45.6 5.6 48 336-383 83-130 (388)
90 3gw4_A Uncharacterized protein 92.7 0.094 3.2E-06 41.9 3.8 69 317-388 26-100 (203)
91 4gyw_A UDP-N-acetylglucosamine 92.6 0.13 4.5E-06 53.9 6.0 48 336-383 59-106 (723)
92 3ieg_A DNAJ homolog subfamily 92.6 0.17 5.8E-06 43.2 5.6 47 336-382 53-99 (359)
93 3hym_B Cell division cycle pro 92.6 0.19 6.6E-06 42.7 5.9 48 336-383 141-188 (330)
94 1wao_1 Serine/threonine protei 92.6 0.15 5.1E-06 49.8 5.9 76 308-383 16-103 (477)
95 3cv0_A Peroxisome targeting si 92.6 0.2 6.8E-06 42.5 5.9 51 336-386 222-272 (327)
96 3cv0_A Peroxisome targeting si 92.6 0.2 6.9E-06 42.5 5.9 49 336-384 71-119 (327)
97 4abn_A Tetratricopeptide repea 92.5 0.11 3.8E-06 50.1 4.8 64 317-383 102-166 (474)
98 2c2l_A CHIP, carboxy terminus 92.4 0.1 3.6E-06 46.5 4.2 49 335-383 19-67 (281)
99 3hym_B Cell division cycle pro 92.3 0.21 7.2E-06 42.4 5.8 54 335-388 174-227 (330)
100 4abn_A Tetratricopeptide repea 92.3 0.27 9.4E-06 47.4 7.2 52 334-385 235-289 (474)
101 1fch_A Peroxisomal targeting s 92.1 0.22 7.6E-06 43.4 5.8 84 301-384 67-162 (368)
102 3ieg_A DNAJ homolog subfamily 92.1 0.17 5.7E-06 43.3 4.9 49 335-383 287-335 (359)
103 2yhc_A BAMD, UPF0169 lipoprote 92.1 0.26 8.9E-06 41.7 6.1 63 318-383 5-70 (225)
104 1p5q_A FKBP52, FK506-binding p 92.0 0.24 8.3E-06 45.5 6.3 50 334-383 210-259 (336)
105 3u4t_A TPR repeat-containing p 92.0 0.047 1.6E-06 45.7 1.4 50 334-383 88-137 (272)
106 1w3b_A UDP-N-acetylglucosamine 91.9 0.22 7.4E-06 44.6 5.6 47 336-382 287-333 (388)
107 3ro3_A PINS homolog, G-protein 91.9 0.11 3.9E-06 38.7 3.2 55 334-388 103-163 (164)
108 2vsy_A XCC0866; transferase, g 91.8 0.2 6.9E-06 48.5 5.7 72 312-383 37-120 (568)
109 3mkr_A Coatomer subunit epsilo 91.8 0.27 9.2E-06 44.3 6.1 49 335-383 181-229 (291)
110 4g1t_A Interferon-induced prot 91.7 0.14 4.8E-06 46.8 4.2 75 312-386 386-462 (472)
111 2ho1_A Type 4 fimbrial biogene 91.7 0.22 7.6E-06 41.3 5.1 47 336-382 157-203 (252)
112 3nf1_A KLC 1, kinesin light ch 91.6 0.19 6.4E-06 42.4 4.6 53 334-386 167-227 (311)
113 1wao_1 Serine/threonine protei 91.5 0.2 6.7E-06 49.0 5.3 51 333-383 19-69 (477)
114 2y4t_A DNAJ homolog subfamily 91.5 0.27 9.2E-06 44.4 5.8 48 336-383 42-89 (450)
115 2xpi_A Anaphase-promoting comp 91.4 0.27 9.2E-06 46.3 5.9 49 335-383 531-579 (597)
116 1p5q_A FKBP52, FK506-binding p 91.3 0.33 1.1E-05 44.6 6.4 50 334-383 161-225 (336)
117 3u64_A Protein TP_0956; tetrat 91.3 0.34 1.2E-05 47.3 6.6 79 298-383 140-233 (301)
118 2gw1_A Mitochondrial precursor 91.2 0.32 1.1E-05 44.3 6.1 52 333-384 428-479 (514)
119 3ro3_A PINS homolog, G-protein 91.2 0.3 1E-05 36.4 5.0 51 336-386 25-81 (164)
120 3fp2_A TPR repeat-containing p 91.2 0.33 1.1E-05 44.8 6.1 50 334-383 442-491 (537)
121 1hh8_A P67PHOX, NCF-2, neutrop 91.0 0.32 1.1E-05 39.5 5.4 50 334-383 85-150 (213)
122 1ihg_A Cyclophilin 40; ppiase 91.0 0.33 1.1E-05 45.9 6.1 65 316-383 272-336 (370)
123 2vsy_A XCC0866; transferase, g 90.8 0.32 1.1E-05 47.1 5.9 74 311-384 70-158 (568)
124 3qou_A Protein YBBN; thioredox 90.7 0.37 1.3E-05 43.0 5.9 51 335-385 234-286 (287)
125 4gyw_A UDP-N-acetylglucosamine 90.7 0.29 1E-05 51.4 5.9 51 336-386 127-177 (723)
126 4i17_A Hypothetical protein; T 90.5 0.38 1.3E-05 39.9 5.4 50 334-383 21-71 (228)
127 3ro2_A PINS homolog, G-protein 90.4 0.66 2.3E-05 38.8 6.8 69 317-388 5-77 (338)
128 2y4t_A DNAJ homolog subfamily 90.4 0.29 9.8E-06 44.2 4.9 49 335-383 310-358 (450)
129 1hz4_A MALT regulatory protein 90.4 0.19 6.3E-06 44.9 3.6 53 336-388 151-208 (373)
130 1hz4_A MALT regulatory protein 90.1 0.41 1.4E-05 42.7 5.6 56 335-390 68-129 (373)
131 3qww_A SET and MYND domain-con 89.8 0.34 1.1E-05 48.0 5.2 79 305-386 328-414 (433)
132 1kt0_A FKBP51, 51 kDa FK506-bi 89.3 0.39 1.3E-05 46.3 5.2 64 317-383 317-380 (457)
133 3qwp_A SET and MYND domain-con 89.3 0.32 1.1E-05 47.7 4.7 80 304-386 316-403 (429)
134 4a1s_A PINS, partner of inscut 89.1 0.24 8.2E-06 44.3 3.3 56 334-389 100-161 (411)
135 2gw1_A Mitochondrial precursor 89.1 0.69 2.3E-05 42.1 6.4 55 334-388 352-406 (514)
136 3ulq_A Response regulator aspa 88.8 0.57 2E-05 42.3 5.6 56 334-389 238-299 (383)
137 2yhc_A BAMD, UPF0169 lipoprote 88.6 1.2 4.1E-05 37.6 7.2 50 334-383 110-176 (225)
138 3ro2_A PINS homolog, G-protein 88.6 0.3 1E-05 40.9 3.4 55 335-389 58-118 (338)
139 3mv2_B Coatomer subunit epsilo 88.6 0.47 1.6E-05 45.8 5.1 46 335-380 115-162 (310)
140 2if4_A ATFKBP42; FKBP-like, al 88.6 0.89 3E-05 41.9 6.8 67 314-383 176-259 (338)
141 4a1s_A PINS, partner of inscut 88.4 0.46 1.6E-05 42.4 4.6 56 335-390 238-299 (411)
142 2if4_A ATFKBP42; FKBP-like, al 88.3 0.36 1.2E-05 44.6 4.0 53 332-384 242-294 (338)
143 2pzi_A Probable serine/threoni 88.2 0.44 1.5E-05 48.5 4.9 48 336-383 449-496 (681)
144 3ly7_A Transcriptional activat 88.1 0.62 2.1E-05 46.4 5.8 48 335-383 292-339 (372)
145 3sf4_A G-protein-signaling mod 88.1 0.72 2.5E-05 40.4 5.6 70 316-388 8-81 (406)
146 3u64_A Protein TP_0956; tetrat 87.9 0.69 2.4E-05 45.1 5.9 49 335-383 219-269 (301)
147 3q15_A PSP28, response regulat 87.7 0.45 1.5E-05 43.2 4.2 56 334-389 236-296 (378)
148 3qww_A SET and MYND domain-con 87.1 0.55 1.9E-05 46.4 4.8 52 335-386 313-372 (433)
149 4g1t_A Interferon-induced prot 86.8 1.2 4E-05 40.8 6.4 47 336-382 316-362 (472)
150 3sf4_A G-protein-signaling mod 86.1 0.82 2.8E-05 40.0 4.8 52 336-387 203-260 (406)
151 3n71_A Histone lysine methyltr 86.1 0.57 2E-05 47.1 4.3 81 303-386 337-425 (490)
152 2h6f_A Protein farnesyltransfe 85.7 0.79 2.7E-05 43.9 4.9 47 336-382 148-194 (382)
153 1kt0_A FKBP51, 51 kDa FK506-bi 85.7 1 3.5E-05 43.4 5.7 65 316-383 267-346 (457)
154 2h6f_A Protein farnesyltransfe 85.6 1.1 3.7E-05 43.0 5.8 49 335-383 112-161 (382)
155 2ond_A Cleavage stimulation fa 85.5 2 6.8E-05 38.1 7.1 48 335-382 184-231 (308)
156 3ma5_A Tetratricopeptide repea 85.2 0.7 2.4E-05 34.6 3.5 36 349-384 2-37 (100)
157 1ihg_A Cyclophilin 40; ppiase 84.7 0.55 1.9E-05 44.4 3.2 64 317-383 223-302 (370)
158 1zu2_A Mitochondrial import re 84.5 0.94 3.2E-05 39.9 4.5 48 336-383 62-120 (158)
159 2pzi_A Probable serine/threoni 84.2 1.2 4.3E-05 45.2 5.8 49 335-383 406-462 (681)
160 2xpi_A Anaphase-promoting comp 84.0 1.5 5.3E-05 41.2 5.9 49 336-384 457-505 (597)
161 1qqe_A Vesicular transport pro 83.8 1.4 4.7E-05 39.1 5.3 77 311-389 30-112 (292)
162 3n71_A Histone lysine methyltr 83.6 1 3.5E-05 45.2 4.9 51 335-385 324-382 (490)
163 3qwp_A SET and MYND domain-con 83.5 0.86 2.9E-05 44.7 4.2 52 335-386 302-361 (429)
164 1vj7_A Bifunctional RELA/SPOT; 81.9 3.5 0.00012 41.3 7.8 102 11-124 7-108 (393)
165 1ouv_A Conserved hypothetical 81.8 2 6.7E-05 36.6 5.3 49 333-383 199-251 (273)
166 2ond_A Cleavage stimulation fa 81.6 1.5 5E-05 39.0 4.5 69 315-383 81-163 (308)
167 4gcn_A Protein STI-1; structur 80.4 2.2 7.5E-05 33.3 4.8 51 333-383 55-112 (127)
168 1qqe_A Vesicular transport pro 79.4 1.7 5.9E-05 38.4 4.2 52 334-385 132-189 (292)
169 2ifu_A Gamma-SNAP; membrane fu 79.4 2.2 7.4E-05 38.0 4.9 56 334-389 129-190 (307)
170 2hr2_A Hypothetical protein; a 78.5 3.1 0.00011 36.5 5.5 55 332-386 69-134 (159)
171 3ulq_A Response regulator aspa 78.5 2 6.9E-05 38.7 4.5 51 336-386 159-216 (383)
172 3mkr_A Coatomer subunit epsilo 77.9 3.8 0.00013 36.8 6.1 49 334-382 214-263 (291)
173 3q15_A PSP28, response regulat 77.2 2 7E-05 38.8 4.1 73 313-388 97-175 (378)
174 2qfc_A PLCR protein; TPR, HTH, 76.9 2.5 8.7E-05 37.0 4.6 57 334-390 210-273 (293)
175 2qfc_A PLCR protein; TPR, HTH, 76.1 5.3 0.00018 34.9 6.4 53 334-386 169-228 (293)
176 3u3w_A Transcriptional activat 75.9 2.1 7.3E-05 37.5 3.8 56 335-390 170-232 (293)
177 2hr2_A Hypothetical protein; a 75.5 1.6 5.5E-05 38.3 2.9 50 334-383 25-86 (159)
178 1zu2_A Mitochondrial import re 75.2 2.5 8.5E-05 37.2 4.0 48 336-383 18-75 (158)
179 2v5f_A Prolyl 4-hydroxylase su 74.9 4.2 0.00014 31.2 4.8 49 335-383 20-75 (104)
180 3u3w_A Transcriptional activat 74.8 4.7 0.00016 35.3 5.7 57 334-390 210-273 (293)
181 2ooe_A Cleavage stimulation fa 73.9 7.9 0.00027 37.0 7.4 73 311-383 369-454 (530)
182 3nqw_A CG11900; stringent resp 72.9 5.4 0.00019 35.4 5.7 77 38-123 12-92 (179)
183 2ooe_A Cleavage stimulation fa 72.8 3 0.0001 39.9 4.2 48 336-384 62-110 (530)
184 3ly7_A Transcriptional activat 72.1 3.3 0.00011 41.1 4.5 36 348-383 271-306 (372)
185 2l6j_A TPR repeat-containing p 71.5 1.3 4.4E-05 31.9 1.1 41 334-374 52-98 (111)
186 1ouv_A Conserved hypothetical 71.3 6.4 0.00022 33.4 5.5 45 336-382 94-142 (273)
187 1na3_A Designed protein CTPR2; 69.2 4.4 0.00015 28.0 3.4 35 334-368 57-91 (91)
188 3nr1_A HD domain-containing pr 67.6 6.4 0.00022 35.0 4.9 76 39-123 11-90 (178)
189 2ifu_A Gamma-SNAP; membrane fu 65.1 4.6 0.00016 35.9 3.5 54 335-388 51-110 (307)
190 1pc2_A Mitochondria fission pr 64.4 9.6 0.00033 33.4 5.4 62 319-383 37-100 (152)
191 3hx3_A Retinaldehyde-binding p 59.9 13 0.00044 34.9 5.7 83 297-388 28-124 (316)
192 1zbp_A Hypothetical protein VP 59.7 13 0.00044 35.9 5.7 50 334-383 11-60 (273)
193 3rjv_A Putative SEL1 repeat pr 54.4 10 0.00034 32.0 3.6 49 334-383 143-197 (212)
194 3myv_A SUSD superfamily protei 50.0 28 0.00097 34.0 6.5 48 336-383 164-219 (454)
195 3mcx_A SUSD superfamily protei 48.9 29 0.00099 34.0 6.4 47 336-382 176-230 (477)
196 1wfd_A Hypothetical protein 15 48.7 35 0.0012 27.2 5.8 39 334-387 10-48 (93)
197 2uy1_A Cleavage stimulation fa 48.3 24 0.00083 34.7 5.8 48 336-383 195-242 (493)
198 4b4t_Q 26S proteasome regulato 48.2 24 0.00081 31.7 5.2 55 336-390 151-211 (434)
199 2ff4_A Probable regulatory pro 47.9 32 0.0011 33.0 6.4 50 336-385 187-236 (388)
200 2v6x_A Vacuolar protein sortin 47.3 40 0.0014 26.1 5.8 39 334-387 8-46 (85)
201 3o48_A Mitochondria fission 1 46.9 26 0.00088 30.6 5.1 58 322-382 48-106 (134)
202 4a5x_A MITD1, MIT domain-conta 46.7 28 0.00094 27.7 4.8 36 337-387 14-49 (86)
203 4b4t_Q 26S proteasome regulato 46.5 32 0.0011 30.9 5.8 51 336-386 20-87 (434)
204 1klx_A Cysteine rich protein B 45.4 26 0.0009 27.8 4.6 45 336-382 41-89 (138)
205 2kc7_A BFR218_protein; tetratr 43.7 19 0.00066 25.5 3.2 27 357-383 3-29 (99)
206 3kez_A Putative sugar binding 42.6 38 0.0013 33.2 6.1 48 336-383 170-225 (461)
207 3rjv_A Putative SEL1 repeat pr 42.1 61 0.0021 27.1 6.6 52 332-383 101-158 (212)
208 3lew_A SUSD-like carbohydrate 40.9 44 0.0015 33.2 6.3 48 336-383 174-232 (495)
209 3hdx_A SUSD homolog, SUSD supe 39.9 49 0.0017 32.5 6.4 27 357-383 200-226 (478)
210 2cpt_A SKD1 protein, vacuolar 39.2 39 0.0013 28.3 4.8 38 335-387 14-51 (117)
211 1y8m_A FIS1; mitochondria, unk 38.1 68 0.0023 28.2 6.4 61 319-382 44-105 (144)
212 3qnk_A Putative lipoprotein; a 37.3 52 0.0018 32.7 6.2 47 336-382 153-210 (517)
213 2v6y_A AAA family ATPase, P60 36.5 57 0.0019 25.5 5.1 37 336-387 8-44 (83)
214 2w2u_A Hypothetical P60 katani 35.3 61 0.0021 25.5 5.1 37 336-387 16-52 (83)
215 1klx_A Cysteine rich protein B 35.1 69 0.0024 25.3 5.6 49 333-383 74-126 (138)
216 3mv2_B Coatomer subunit epsilo 34.9 17 0.00058 34.9 2.2 55 316-380 72-126 (310)
217 2ljw_A ALR2454 protein; novel 33.9 21 0.00073 30.5 2.4 24 56-79 49-72 (110)
218 3snx_A SUSD homolog, putative 33.0 57 0.0019 32.2 5.7 26 357-382 194-219 (460)
219 2wpv_A GET4, UPF0363 protein Y 32.7 41 0.0014 32.4 4.5 37 353-389 131-177 (312)
220 1nzn_A CGI-135 protein, fissio 32.3 55 0.0019 27.9 4.7 63 317-382 38-102 (126)
221 4gns_B Protein CSD3, chitin bi 32.1 33 0.0011 37.0 4.1 43 333-375 350-392 (754)
222 3ckc_A SUSD; TPR repeat, carbo 31.3 69 0.0024 31.2 5.9 47 336-382 169-231 (527)
223 3otn_A SUSD superfamily protei 29.9 43 0.0015 33.0 4.2 47 336-382 160-225 (482)
224 3arc_C Photosystem II core lig 29.2 1.1E+02 0.0038 31.5 7.1 82 26-112 52-145 (455)
225 2xm6_A Protein corresponding t 29.0 90 0.0031 29.3 6.1 48 334-383 381-432 (490)
226 3jq1_A SUSD superfamily protei 28.8 62 0.0021 32.0 5.1 46 336-381 154-207 (481)
227 2xm6_A Protein corresponding t 27.8 92 0.0031 29.2 5.9 44 336-381 167-214 (490)
228 4f3v_A ESX-1 secretion system 27.7 27 0.00094 33.0 2.3 46 336-381 187-235 (282)
229 3i4g_A SUSD-like carbohydrate 27.4 82 0.0028 31.6 5.8 47 336-382 167-226 (528)
230 4f3v_A ESX-1 secretion system 26.5 73 0.0025 30.1 5.0 46 336-381 151-198 (282)
231 1vzy_A 33 kDa chaperonin; chap 25.0 59 0.002 31.0 4.1 67 106-204 201-286 (291)
232 3e4b_A ALGK; tetratricopeptide 23.2 1E+02 0.0035 29.3 5.3 31 335-365 194-224 (452)
233 2w84_A Peroxisomal membrane pr 22.7 44 0.0015 26.5 2.2 36 12-48 13-48 (70)
234 4e6h_A MRNA 3'-END-processing 21.6 94 0.0032 32.5 5.1 48 337-384 360-408 (679)
235 3oei_C RELK (toxin RV3358); to 21.1 1.1E+02 0.0037 24.8 4.3 33 315-354 20-53 (96)
236 1ya0_A SMG-7 transcript varian 20.9 1.3E+02 0.0045 30.5 5.9 41 336-376 168-208 (497)
237 3l22_A SUSD superfamily protei 20.3 49 0.0017 32.2 2.5 25 357-381 204-228 (441)
No 1
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.97 E-value=0.0017 Score=49.23 Aligned_cols=57 Identities=19% Similarity=0.245 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
...+.|.+.++++++.||-..+.+..||++|...|++++|...-++++++--..|..
T Consensus 21 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 21 DNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 348899999999999999999999999999999999999999999999987666554
No 2
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.55 E-value=0.005 Score=43.50 Aligned_cols=50 Identities=28% Similarity=0.412 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...++|...++++++.+|-..+.+..||++|...|++++|....++++++
T Consensus 23 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34889999999999999999999999999999999999999999998876
No 3
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.0039 Score=45.51 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|--.+.+.-+|++|...|+|++|....++++++
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 18 GLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 44889999999999999999999999999999999999999999988865
No 4
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.44 E-value=0.004 Score=49.96 Aligned_cols=49 Identities=20% Similarity=0.162 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.+.|.+.++++++.||-..+.+..||++|...|+|++|...-++++++-
T Consensus 61 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 61 HEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4555566666666666655566666666666666666666665555554
No 5
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.39 E-value=0.0058 Score=44.63 Aligned_cols=50 Identities=18% Similarity=0.316 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHhhCCCcCc-hHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGE-PHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgE-P~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
..+.|.+.++++++.+|--.+ .+..+|++|...|+|++|...-++++++-
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 378899999999999999988 99999999999999999999999998763
No 6
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.33 E-value=0.0084 Score=45.27 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
...+.|...++++++.+|-..+.+..||++|...|++++|...-++++++.-.-|.
T Consensus 33 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 33 EQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 34789999999999999999999999999999999999999999999988766554
No 7
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.30 E-value=0.0067 Score=47.75 Aligned_cols=85 Identities=15% Similarity=-0.022 Sum_probs=54.4
Q ss_pred ccccccccccCChhhHHHHHHHHHHhhccCCCCC------------chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhc
Q 015869 299 PPVFENCTRILDAKEQIEARDLYWEAVCGNSDGS------------KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLA 366 (399)
Q Consensus 299 PPVF~~CT~vL~~~dq~aArdlYWeav~~~~~~~------------~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~ 366 (399)
+..|......+..++-..|...|=+++..+.+.. ....+.|.+.++++++.||--.+.+..||.+|..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3344444455555666667777766665222221 1225667777778888888777777778888888
Q ss_pred cCCcHHHHHHHHHHHHH
Q 015869 367 KGEFEEAEREAGKGLML 383 (399)
Q Consensus 367 ~gr~~eA~~~A~~gL~l 383 (399)
.|++++|...-++++++
T Consensus 98 ~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 98 EHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 88887777777776654
No 8
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=96.24 E-value=0.012 Score=43.50 Aligned_cols=63 Identities=17% Similarity=0.042 Sum_probs=52.3
Q ss_pred HHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 319 DLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 319 dlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
-+|.-+.+ -......+.|.+.++++++.+|--.+.+..+|++|...|++++|....++++++-
T Consensus 52 ~~~~la~~---~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 52 LYSNRAAC---YTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HHHHHHHH---HTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 34445544 2233458899999999999999999999999999999999999999999988763
No 9
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.24 E-value=0.0072 Score=46.25 Aligned_cols=50 Identities=18% Similarity=0.169 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-..+.+..||++|...|++++|....+++|++
T Consensus 41 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 41 GEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34889999999999999999999999999999999999999999998876
No 10
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.0097 Score=45.33 Aligned_cols=50 Identities=16% Similarity=0.058 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
..+.|.+.++++++.||-..+.+..+|.+|...|+|++|...-++++++-
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 53 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 36788888999999999888889999999999999999998888888876
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.0099 Score=45.28 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++|+.+|--.+.+.-+|.+|...|+|++|....++++++
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34889999999999999999999999999999999999999999999886
No 12
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.14 E-value=0.013 Score=42.76 Aligned_cols=48 Identities=21% Similarity=0.061 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.+.++++.+|--.+.+..+|++|...|++++|....++++++
T Consensus 62 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 62 YAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 455666666666666666666666666666666666666666665554
No 13
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.13 E-value=0.0074 Score=48.49 Aligned_cols=50 Identities=26% Similarity=0.176 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...++|.+.++++++.||-..+.+.-||.+|...|++++|...-+++|++
T Consensus 121 g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 121 GEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 34889999999999999999999999999999999999999999999875
No 14
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.12 E-value=0.0093 Score=42.68 Aligned_cols=46 Identities=15% Similarity=-0.020 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhhCCC--cCchHHHHHHHHhcc-CCcHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPF--VGEPHVVLGQIYLAK-GEFEEAEREAGKGL 381 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~--VgEP~~vLAQ~~l~~-gr~~eA~~~A~~gL 381 (399)
.+.|.+.++++++.+|- ..+.+..||++|... |++++|...-.+++
T Consensus 56 ~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 56 YEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45566666666666666 556666666666666 66666665555444
No 15
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.09 E-value=0.013 Score=46.34 Aligned_cols=57 Identities=19% Similarity=0.126 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
...+.|.+...+||+.||--.+.+.-+|++|+..|+|++|.....++|++--.....
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 348899999999999999999999999999999999999999999999987665443
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.07 E-value=0.0099 Score=48.17 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.++|++.++++|+.||--.+-+..||++|...|++++|...-++++++
T Consensus 47 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 47 YDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 566677777777777766666777777777777777776666666654
No 17
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.05 E-value=0.0098 Score=47.24 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++|+.||--.+.+.-||++|...|+|++|...-+++|++
T Consensus 61 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 61 MEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44788999999999999999999999999999999999999999988876
No 18
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.04 E-value=0.012 Score=44.57 Aligned_cols=64 Identities=22% Similarity=0.102 Sum_probs=51.7
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.-++.-+.+ -......+.|.+.++++++.+|-..+.+.-+|++|...|++++|...-++++++
T Consensus 65 ~~~~~~~a~~---~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 65 AVLHRNRAAC---HLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 4444445544 122334889999999999999999999999999999999999999999988876
No 19
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.00 E-value=0.0042 Score=48.94 Aligned_cols=49 Identities=20% Similarity=0.077 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|...++++++.||--.+.+..||.+|...|++++|...-++++++
T Consensus 32 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 32 NLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999999999999999886
No 20
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.98 E-value=0.012 Score=46.47 Aligned_cols=76 Identities=13% Similarity=-0.037 Sum_probs=53.0
Q ss_pred CChhhHHHHHHHHHHhhccCCCC------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHH
Q 015869 309 LDAKEQIEARDLYWEAVCGNSDG------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAERE 376 (399)
Q Consensus 309 L~~~dq~aArdlYWeav~~~~~~------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~ 376 (399)
+..++-..|...|=+++..+.+. .....+.|.+.++++++.||---+.+.-||++|...|++++|...
T Consensus 29 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 108 (142)
T 2xcb_A 29 YQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESG 108 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHH
Confidence 34455556666666666422221 112367788888888888888888888888888888888888888
Q ss_pred HHHHHHHH
Q 015869 377 AGKGLMLL 384 (399)
Q Consensus 377 A~~gL~ll 384 (399)
-++++++-
T Consensus 109 ~~~al~~~ 116 (142)
T 2xcb_A 109 FYSARALA 116 (142)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 88887764
No 21
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.95 E-value=0.013 Score=44.52 Aligned_cols=75 Identities=24% Similarity=0.196 Sum_probs=53.9
Q ss_pred hhHHHHHHHHHHhhccCCCC------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHH
Q 015869 312 KEQIEARDLYWEAVCGNSDG------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGK 379 (399)
Q Consensus 312 ~dq~aArdlYWeav~~~~~~------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~ 379 (399)
++-..|...|-+++.-+.+. .....+.|...++++++.+|-..+++..||.+|...|++++|...-.+
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 102 (137)
T 3q49_B 23 RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQR 102 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44455666666666422221 122367788888888888888888888888888888888888888888
Q ss_pred HHHHHHh
Q 015869 380 GLMLLLE 386 (399)
Q Consensus 380 gL~ll~~ 386 (399)
++++--.
T Consensus 103 a~~~~p~ 109 (137)
T 3q49_B 103 AYSLAKE 109 (137)
T ss_dssp HHHHHHH
T ss_pred HHHHChh
Confidence 8887654
No 22
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.95 E-value=0.015 Score=45.91 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||--.+.+..||.+|...|+|++|....++++++
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 44889999999999999999999999999999999999999999999876
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.82 E-value=0.017 Score=43.80 Aligned_cols=50 Identities=26% Similarity=0.260 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++++.+|-..+.+..+|.+|...|+|++|....++++++
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 23 RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 44889999999999999999999999999999999999999999999875
No 24
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.81 E-value=0.016 Score=46.07 Aligned_cols=50 Identities=12% Similarity=0.036 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++|++||--.+.+.-+|.+|...|+|++|....+++|++
T Consensus 27 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 34889999999999999999999999999999999999999999999986
No 25
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.74 E-value=0.019 Score=41.29 Aligned_cols=48 Identities=25% Similarity=0.178 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|...++++++.+|-..+.+..+|.+|...|++++|....++++++
T Consensus 54 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 54 YQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 566777777777777777777777777777777777777776666543
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.73 E-value=0.02 Score=46.58 Aligned_cols=51 Identities=16% Similarity=-0.009 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
...+.|.+.++++++.||--.+.+.-||++|...|++++|...-++++++-
T Consensus 69 g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 69 GQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 347899999999999999999999999999999999999999999998874
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.72 E-value=0.013 Score=42.06 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|...+++++..+|--.+.+..+|++|...|+|++|....++++++
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 34889999999999999998889999999999999999999999998876
No 28
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.72 E-value=0.014 Score=43.74 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc---CchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 315 IEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV---GEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 315 ~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V---gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.++..+|+-+.+ -......+.|...+++++..+|-- .+.+..||++|...|++++|...-++.++.
T Consensus 37 ~~~~~~~~lg~~---~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 37 YTPNALYWLGES---YYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp THHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHH---HHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334556666655 223344889999999999998876 788999999999999999999988887765
No 29
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.68 E-value=0.02 Score=47.94 Aligned_cols=50 Identities=16% Similarity=0.012 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||--.+++.-||.+|...|++++|...-++++++
T Consensus 84 g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 84 EQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp TCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34788999999999999999999999999999999999999998888876
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.67 E-value=0.019 Score=46.02 Aligned_cols=67 Identities=19% Similarity=0.169 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 314 QIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 314 q~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...|..+|-.+.+ -......+.|.+.+++++++||-..+.+.-||++|...|+|++|....++++++
T Consensus 8 ~~~a~~~~~~g~~---~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 8 TPESDKLKSEGNA---AMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp CHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3445555555554 223344899999999999999999999999999999999999999999999876
No 31
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.64 E-value=0.018 Score=42.60 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|--.+.+..+|++|...|++++|....++++++
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34788999999999999999999999999999999999999999998875
No 32
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.62 E-value=0.01 Score=44.84 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 338 KAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 338 ~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.|.+.++++++.||--...+..||++|...|+|++|....++++++-
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD 49 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 47889999999999999999999999999999999999999998863
No 33
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.61 E-value=0.019 Score=48.14 Aligned_cols=63 Identities=22% Similarity=0.166 Sum_probs=53.0
Q ss_pred HHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 318 RDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 318 rdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+|-.+++ -......+.|++.++++++.||--.+-+.-|+.+|...|+|++|...-++++++
T Consensus 37 ~~~~~lg~~---~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 37 DDIYSYAYD---FYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHH---HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 345555554 123344899999999999999999999999999999999999999999999886
No 34
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.60 E-value=0.02 Score=46.52 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||.-.+.+.-||.+|...|+|++|....++++++
T Consensus 35 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34889999999999999999999999999999999999999999999876
No 35
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.56 E-value=0.019 Score=43.07 Aligned_cols=50 Identities=26% Similarity=0.268 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHhhCCCcC---chHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVG---EPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~Vg---EP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|--. +.+..+|++|...|+|++|...-++++++
T Consensus 16 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 16 GKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 347899999999999988666 78999999999999999999999888775
No 36
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.53 E-value=0.0085 Score=48.56 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=48.3
Q ss_pred CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 332 SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 332 ~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.+.|+|.+.+++++..+|---..++-||++|...|+|++|...-+++|++
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV 60 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4566899999999999999999999999999999999999999999999876
No 37
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=95.52 E-value=0.03 Score=40.58 Aligned_cols=50 Identities=28% Similarity=0.419 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...++|...++++++.+|-..+.+..+|++|...|++++|...-++++++
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 34788999999999999998899999999999999999999988888764
No 38
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.52 E-value=0.021 Score=48.60 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.| --.+.+..||++|...|++++|...-+++|++
T Consensus 134 ~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 134 RDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp HHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 455666666666666 44444555666666666666666666655553
No 39
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.48 E-value=0.03 Score=40.82 Aligned_cols=67 Identities=21% Similarity=0.201 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 314 QIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 314 q~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+..++-.+.+ -......+.|.+.++++++.+|--.+.+..+|.+|...|++++|....++++++
T Consensus 9 ~~~~~~~~~~~~~---~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 9 SAEAERLKTEGNE---QMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHH---HHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 3344444444443 112334788999999999999988888999999999999999999999988875
No 40
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.46 E-value=0.031 Score=40.36 Aligned_cols=49 Identities=29% Similarity=0.426 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|...++++++.+|-..+.+..||++|...|++++|....++++++
T Consensus 58 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 58 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4788999999999999998889999999999999999999998888775
No 41
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.41 E-value=0.028 Score=41.13 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
..+.|...+.++++.+|-..+-+.-+|.+|...|+|++|....++++++.-.-
T Consensus 19 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 19 DFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 47899999999999999988889999999999999999999999999876543
No 42
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.33 E-value=0.022 Score=48.19 Aligned_cols=50 Identities=20% Similarity=0.168 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...++|...+++++++||--.+.+..||++|...|++++|...-+++|++
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 44889999999999999999999999999999999999999999998875
No 43
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.27 E-value=0.039 Score=39.85 Aligned_cols=50 Identities=28% Similarity=0.412 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+++.++++.+|-..+-+..+|++|...|++++|....++++++
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 34788999999999999988888899999999999999999998888775
No 44
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.26 E-value=0.043 Score=42.27 Aligned_cols=48 Identities=19% Similarity=0.025 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.+.++++.+|-..+.+.-+|++|...|++++|...-++++++
T Consensus 63 ~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 63 YGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 455666666666666655556666666666666666666665555554
No 45
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=95.16 E-value=0.035 Score=44.31 Aligned_cols=64 Identities=16% Similarity=0.032 Sum_probs=52.8
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.-++--+.| -......+.|...+.++|+.+|--...+.-+|++|...|+|++|...-+++|++
T Consensus 63 ~~~~~nla~~---~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 63 IPLYANMSQC---YLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHH---HHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 3344444555 223344889999999999999999999999999999999999999999998876
No 46
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.14 E-value=0.039 Score=42.52 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhCCCcCchHH--HHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHV--VLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~--vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
.+.|.+.++++++.||--.+.+. -+++.++..|+|++|...-+....++-..+
T Consensus 97 ~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 151 (166)
T 1a17_A 97 FRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLD 151 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHhcccc
Confidence 56777888888888887666663 344447777888888777777766664433
No 47
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.10 E-value=0.036 Score=44.44 Aligned_cols=50 Identities=20% Similarity=0.243 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||--.+.+.-||++|...|++++|......++..
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~ 68 (184)
T 3vtx_A 19 GDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL 68 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 34888999999999999999999999999999999999999888777653
No 48
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.09 E-value=0.033 Score=39.76 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|...++++++.+|-..+.+..+|++|...|+|++|....++++++
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34788999999999999999999999999999999999999999988875
No 49
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.07 E-value=0.038 Score=41.74 Aligned_cols=64 Identities=16% Similarity=0.015 Sum_probs=51.3
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc---CchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV---GEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V---gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+..+|=.+.+ -......+.|.+.++++++.+|-- ..-+.-+|++|...|+|++|....++++++
T Consensus 28 ~~~~~~~a~~---~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 28 VEQLRKEGNE---LFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHH---HHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 4455555544 223345889999999999999975 777889999999999999999999998876
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=95.05 E-value=0.029 Score=46.68 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=53.9
Q ss_pred HHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 318 RDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 318 rdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...|+-+.| -......+.|.+.++++++.||-..+.+..||.+|...|+|++|...-++++++
T Consensus 43 ~~~~~~~~~---~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 43 VTAYNCGVC---ADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp HHHHHHHHH---HHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 356666666 223445889999999999999999999999999999999999999999999876
No 51
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=94.96 E-value=0.057 Score=39.07 Aligned_cols=49 Identities=29% Similarity=0.433 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|...+++++..+|-....+..+|++|...|++++|....+++++.
T Consensus 50 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 50 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4788999999999999998888999999999999999999998888765
No 52
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=94.90 E-value=0.037 Score=47.38 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=54.8
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc---CchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV---GEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V---gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+..+|+.+.+ --.....+.|.+.++++++.+|-- .+-+.-||.+|...|+|++|...-++++++
T Consensus 14 ~~~~~~~~a~~---~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAME---FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHH---HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 35678888876 223345899999999999997765 888999999999999999999999998876
No 53
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=94.84 E-value=0.032 Score=44.69 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchH------HHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCCc
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPH------VVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSPW 391 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~------~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~W 391 (399)
...+.|.+.++++++..+-.|.|. ..||.+|...|++++|....++++++..+-|..+
T Consensus 121 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 184 (203)
T 3gw4_A 121 GDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSE 184 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 347889999999998877777777 6899999999999999999999999998888765
No 54
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=94.80 E-value=0.042 Score=46.68 Aligned_cols=50 Identities=20% Similarity=0.164 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|...++++|+.||--.+.+..||.+|...|++++|....++++++
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 68 (217)
T 2pl2_A 19 GRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVAR 68 (217)
T ss_dssp TCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34788999999999999999999999999999999999999999999876
No 55
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=94.76 E-value=0.021 Score=45.84 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHH-HhccCCc--HHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQI-YLAKGEF--EEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~-~l~~gr~--~eA~~~A~~gL~l 383 (399)
.+.|...++++++.+|--.+.+.-+|++ |...|++ ++|....++++++
T Consensus 60 ~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 60 YSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 4556666666666666555555556666 5556665 6666555555543
No 56
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=94.75 E-value=0.008 Score=45.99 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhh---CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEK---NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~---NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.++|++.++++++. +|-..+.+.-||.+|...|+|++|...-++++++
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 56799999999999 4888899999999999999999999999999876
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.75 E-value=0.058 Score=41.55 Aligned_cols=51 Identities=22% Similarity=0.197 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
...+.|.+.++++++.+|--.+.+..||.+|...|++++|....++++++-
T Consensus 124 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 124 GRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 347899999999999999999999999999999999999999999998865
No 58
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=94.63 E-value=0.046 Score=43.85 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 337 EKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 337 d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.|...++++++.||--.+.+..||++|...|+|++|...-.+++++
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999888765
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.49 E-value=0.073 Score=40.98 Aligned_cols=50 Identities=30% Similarity=0.305 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-..+.+..+|++|...|++++|....+++++.
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 34788999999999999999999999999999999999999999988875
No 60
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.42 E-value=0.066 Score=44.13 Aligned_cols=64 Identities=19% Similarity=0.084 Sum_probs=52.9
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.-+|.-+.| -......+.|...+.++++.+|-..+.+..+|++|...|+|++|...-.+++++
T Consensus 88 ~~~~~~la~~---~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 88 ISCNLNLATC---YNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3445555555 223344889999999999999999999999999999999999999999998876
No 61
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=94.38 E-value=0.024 Score=52.30 Aligned_cols=81 Identities=16% Similarity=0.117 Sum_probs=54.7
Q ss_pred cccccccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHH
Q 015869 300 PVFENCTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGK 379 (399)
Q Consensus 300 PVF~~CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~ 379 (399)
|.|+.+..+-.......|..+|=.+.+ -......+.|.+.++++++.+|-..+.+..+|.+|...|+|++|....++
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~g~~---~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 84 (537)
T 3fp2_A 8 PDIAQLKGLSPSQRQAYAVQLKNRGNH---FFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTK 84 (537)
T ss_dssp CCHHHHTTSCHHHHHHHHHHHHHHHHH---HHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chHHhhcCCCcchhHHHHHHHHHHHHH---HHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445555554444444455666655554 11223366788888888888888888888888888888888888888887
Q ss_pred HHHH
Q 015869 380 GLML 383 (399)
Q Consensus 380 gL~l 383 (399)
++++
T Consensus 85 al~~ 88 (537)
T 3fp2_A 85 ALEI 88 (537)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7765
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.34 E-value=0.06 Score=44.87 Aligned_cols=47 Identities=17% Similarity=0.089 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++++.+|--.+.+..||++|...|++++|....+++++
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34455555555555555455555555555555555555555554444
No 63
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=94.32 E-value=0.061 Score=43.83 Aligned_cols=50 Identities=16% Similarity=0.350 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++++.||-..+.+..+|.+|...|+|++|...-.+++++
T Consensus 51 g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 51 KNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 44889999999999999999999999999999999999999999999874
No 64
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=94.24 E-value=0.023 Score=46.51 Aligned_cols=48 Identities=23% Similarity=0.290 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.+|--.+.+..+|++|...|++++|....++++++
T Consensus 73 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 73 LERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA 120 (243)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 677888888888888888888888888888888888888888877765
No 65
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.20 E-value=0.042 Score=46.37 Aligned_cols=50 Identities=16% Similarity=-0.025 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHH----------------HHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVV----------------LGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~v----------------LAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||--.+.+.. ||.+|...|+|++|...-+++|++
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 18 GQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp TCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34889999999999999998888999 999999999999999999999876
No 66
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.17 E-value=0.095 Score=43.65 Aligned_cols=49 Identities=20% Similarity=0.150 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++++.+|-..+.+..||.+|...|+|++|...-++++++
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 58 LRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3566777777777777766666677777777777777777666666654
No 67
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.06 E-value=0.055 Score=45.62 Aligned_cols=81 Identities=16% Similarity=0.101 Sum_probs=65.0
Q ss_pred cccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHH
Q 015869 304 NCTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAER 375 (399)
Q Consensus 304 ~CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~ 375 (399)
.+.+...+.+...++.++.-+.+ -......+.|.++++++++. +|....-+..||.+|...|++++|..
T Consensus 14 ~~~q~~~~~~~~~~~~~~~l~~~---~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 90 (311)
T 3nf1_A 14 LYFQGGGYEIPARLRTLHNLVIQ---YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAAN 90 (311)
T ss_dssp GSCSSSCTTSCHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccccCCCCcchHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 45566677777777777776665 22334488999999999994 88889999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 015869 376 EAGKGLMLLLEW 387 (399)
Q Consensus 376 ~A~~gL~ll~~W 387 (399)
..++++++...-
T Consensus 91 ~~~~al~~~~~~ 102 (311)
T 3nf1_A 91 LLNDALAIREKT 102 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999886544
No 68
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.02 E-value=0.052 Score=44.76 Aligned_cols=69 Identities=28% Similarity=0.237 Sum_probs=54.5
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.+..++.-+.+ -......+.|.+.++++++. +|...+.+..||.+|...|++++|....++++++...-
T Consensus 84 ~~~~~~~l~~~---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 84 VAATLNNLAVL---YGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHH---HHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 34444444443 12334488999999999988 79999999999999999999999999999999985443
No 69
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.02 E-value=0.054 Score=44.08 Aligned_cols=49 Identities=22% Similarity=0.123 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhhCCCcC--chHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVG--EPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~Vg--EP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.+.|.+.++++++.||-.. +.+..|+++|...|++++|...-.++|..+
T Consensus 124 ~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 124 DEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp HHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 5566666666666666543 355666666666666666666666665544
No 70
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.093 Score=42.95 Aligned_cols=55 Identities=16% Similarity=0.042 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
...+.|...+.++++.+|-..+-+..+|++|...|++++|...-++++++--+.+
T Consensus 187 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 241 (258)
T 3uq3_A 187 MSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN 241 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc
Confidence 3478899999999999999999999999999999999999999999999875544
No 71
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.79 E-value=0.11 Score=41.52 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhcc-CCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAK-GEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~-gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++++.+|-..+.+..+|++|... |++++|....+++++
T Consensus 58 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 58 NDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 56677777777777776666677777777777 777777766666654
No 72
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.78 E-value=0.062 Score=39.25 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHHhhCCCc-------CchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFV-------GEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~V-------gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|...+.++++.+|-. .+.+.-+|.+|...|++++|...-++++++
T Consensus 52 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 52 GDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34788999999999998876 778889999999999999999999988875
No 73
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=93.77 E-value=0.061 Score=44.68 Aligned_cols=48 Identities=25% Similarity=0.315 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.+|-..+-+..||.+|...|++++|....++++++
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 53 TEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp TGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 566778888888888877777788888888888888888877777665
No 74
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.74 E-value=0.053 Score=43.26 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHhh------------------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEK------------------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~------------------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.....++|+. +|.....+.-+|++|+..|+|++|...+.++|++
T Consensus 26 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 26 DYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 477888889999988 8888889999999999999999999999999986
No 75
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.57 E-value=0.051 Score=44.85 Aligned_cols=53 Identities=28% Similarity=0.343 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 334 EKLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
...+.|.+.++++++. +|.....+..||++|...|++++|....++++++.-.
T Consensus 141 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 141 GKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4488999999999999 8999999999999999999999999999999998543
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.13 Score=42.07 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-..+.+..||.+|...|++++|.....+++++
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 34789999999999999999999999999999999999999999998875
No 77
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.44 E-value=0.12 Score=41.32 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++++.+|-..+-+..||++|...|++++|....++++++
T Consensus 128 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 128 QFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3778889999999999888888888999999999999998888887775
No 78
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.41 E-value=0.14 Score=41.83 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHhhccCCCC------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHH
Q 015869 312 KEQIEARDLYWEAVCGNSDG------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGK 379 (399)
Q Consensus 312 ~dq~aArdlYWeav~~~~~~------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~ 379 (399)
++-..|...|-+++.-+.+. .....+.|.+.++++++.+|--.+.+..+|++|...|++++|....++
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 150 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQR 150 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 44455666666665421111 123378899999999999999999999999999999999999999999
Q ss_pred HHHH
Q 015869 380 GLML 383 (399)
Q Consensus 380 gL~l 383 (399)
++++
T Consensus 151 ~~~~ 154 (243)
T 2q7f_A 151 AVEL 154 (243)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8876
No 79
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=93.39 E-value=0.12 Score=41.94 Aligned_cols=47 Identities=23% Similarity=-0.003 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 338 KAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 338 ~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.|.+.++++++.||--.+.+..||++|...|++++|...-++++++-
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 37889999999999999999999999999999999999998887653
No 80
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.38 E-value=0.11 Score=45.86 Aligned_cols=53 Identities=25% Similarity=0.238 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
...+.|.+.++++++.+|-..+.+..||++|...|++++|...-++++++--.
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 34789999999999999999999999999999999999999999999988644
No 81
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.26 E-value=0.12 Score=40.48 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|..+|+++++.+|--....+.|+.+|+..|+|++|...=++.|+.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 478999999999999999999999999999999999999887766654
No 82
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=93.19 E-value=0.22 Score=40.99 Aligned_cols=65 Identities=17% Similarity=0.063 Sum_probs=50.7
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcC----------------chHHHHHHHHhccCCcHHHHHHHHH
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVG----------------EPHVVLGQIYLAKGEFEEAEREAGK 379 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~Vg----------------EP~~vLAQ~~l~~gr~~eA~~~A~~ 379 (399)
.+..++-.+.+ -......+.|.+.+.++++.+|--. +-+.-+|.+|+..|+|++|.....+
T Consensus 37 ~~~~~~~~g~~---~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 37 SAFDIKEEGNE---FFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44444444433 1123448899999999999988766 6778899999999999999999999
Q ss_pred HHHH
Q 015869 380 GLML 383 (399)
Q Consensus 380 gL~l 383 (399)
++++
T Consensus 114 al~~ 117 (198)
T 2fbn_A 114 VLKI 117 (198)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9886
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=93.13 E-value=0.16 Score=42.49 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|...++++++.+|--.+-+..||.+|...|+|++|.....++++
T Consensus 19 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 19 YAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS 65 (272)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 56677777777777777666777777777777777777766666655
No 84
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.04 E-value=0.12 Score=46.26 Aligned_cols=54 Identities=24% Similarity=0.211 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
...+.|.+.++++++.+|--...+..||++|...|+|++|...-.+++++--+-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 348899999999999999999999999999999999999999999999886543
No 85
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.02 E-value=0.11 Score=46.33 Aligned_cols=45 Identities=20% Similarity=0.019 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 339 AEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 339 a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
|.+.+++++++||=-.+.++-||.+|...|++++|...-.++|++
T Consensus 204 a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 204 EIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 555666666666666666666666666666666666666665554
No 86
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.98 E-value=0.14 Score=44.78 Aligned_cols=54 Identities=20% Similarity=0.123 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
...+.|.+.++++++.+|-..+.+..||++|...|++++|...-++++++--.-
T Consensus 265 g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 265 NQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 347889999999999999999999999999999999999999999999876554
No 87
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.88 E-value=0.16 Score=44.93 Aligned_cols=58 Identities=17% Similarity=0.109 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCCc
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSPW 391 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~W 391 (399)
...+.|.+.++++++.+|-..+.+..||++|...|+|++|...-++++++--.-...|
T Consensus 113 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 113 ENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHH
Confidence 3478999999999999999999999999999999999999999999998755544443
No 88
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=92.73 E-value=0.2 Score=42.79 Aligned_cols=68 Identities=16% Similarity=0.115 Sum_probs=50.7
Q ss_pred HHHHHHHHhhccCC-----CCCchhHHHHHHHHHHHHhhCCCcCchH-----------------HHHHHHHhccCCcHHH
Q 015869 316 EARDLYWEAVCGNS-----DGSKEKLEKAEELLLRCIEKNPFVGEPH-----------------VVLGQIYLAKGEFEEA 373 (399)
Q Consensus 316 aArdlYWeav~~~~-----~~~~~~~d~a~~lL~~~i~~NP~VgEP~-----------------~vLAQ~~l~~gr~~eA 373 (399)
.+..+|.-+.|--. .......+.|.+.++++++++|---... +-+|.+|...|+|++|
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 167 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAA 167 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 34556666665100 0014558899999999999998665555 7789999999999999
Q ss_pred HHHHHHHHHH
Q 015869 374 EREAGKGLML 383 (399)
Q Consensus 374 ~~~A~~gL~l 383 (399)
...-+++++.
T Consensus 168 ~~~~~~~l~~ 177 (261)
T 3qky_A 168 AVTYEAVFDA 177 (261)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998888764
No 89
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=92.66 E-value=0.15 Score=45.55 Aligned_cols=48 Identities=21% Similarity=0.201 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.+|-..+.+.-|+.+|...|++++|...-++++++
T Consensus 83 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 130 (388)
T 1w3b_A 83 LQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY 130 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 466777777777777766666777777777777777777666666654
No 90
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=92.65 E-value=0.094 Score=41.89 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=54.4
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHh------hCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIE------KNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~------~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
++-++.-+.+ -......+.|.+.++++++ .+|....-+..||.+|...|+|++|.....+++++.-.-|
T Consensus 26 ~~~~~~l~~~---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 100 (203)
T 3gw4_A 26 SGARFMLGYV---YAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLP 100 (203)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHH---HHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 4444444443 1122347889999999999 6777778888999999999999999999999999987776
No 91
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=92.65 E-value=0.13 Score=53.92 Aligned_cols=48 Identities=13% Similarity=0.137 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++|++||=-.+-+.-|+.+|...|++++|...-+++|++
T Consensus 59 ~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 59 LQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 556666666677766666666666677776677777666666666654
No 92
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.63 E-value=0.17 Score=43.25 Aligned_cols=47 Identities=23% Similarity=0.231 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++++.+|--.+-+..+|++|...|++++|...-+++++
T Consensus 53 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 99 (359)
T 3ieg_A 53 SKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLK 99 (359)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHh
Confidence 45566666666666666666666666666666666666666655554
No 93
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.62 E-value=0.19 Score=42.66 Aligned_cols=48 Identities=17% Similarity=0.099 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.+|-..+++..+|.+|...|++++|.....+++++
T Consensus 141 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 188 (330)
T 3hym_B 141 HDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSI 188 (330)
T ss_dssp HHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 567888888888888888888888888888888888888877777654
No 94
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=92.60 E-value=0.15 Score=49.84 Aligned_cols=76 Identities=21% Similarity=0.101 Sum_probs=59.3
Q ss_pred cCChhhHHHHHHHHHHhhccCCCC------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHH
Q 015869 308 ILDAKEQIEARDLYWEAVCGNSDG------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAER 375 (399)
Q Consensus 308 vL~~~dq~aArdlYWeav~~~~~~------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~ 375 (399)
-+..++-..|...|=+++.-+.+. .....+.|.+.++++++.+|-..+.+.-||.+|...|+|++|..
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~ 95 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALR 95 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 345566677777887777622221 12336789999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 015869 376 EAGKGLML 383 (399)
Q Consensus 376 ~A~~gL~l 383 (399)
.-++++++
T Consensus 96 ~~~~al~~ 103 (477)
T 1wao_1 96 DYETVVKV 103 (477)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998886
No 95
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.59 E-value=0.2 Score=42.53 Aligned_cols=51 Identities=12% Similarity=0.162 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.+.|.+.++++++.+|--.+.+..||++|+..|++++|....++++++.-.
T Consensus 222 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 222 PQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 677888888888888877778888888888888888888888887776543
No 96
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.56 E-value=0.2 Score=42.51 Aligned_cols=49 Identities=14% Similarity=-0.130 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.+.|.+.++++++.+|-..+.+..+|.+|...|++++|....++++++-
T Consensus 71 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 119 (327)
T 3cv0_A 71 DGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 119 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5667777777777777777777777777777777777777777776653
No 97
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.54 E-value=0.11 Score=50.13 Aligned_cols=64 Identities=23% Similarity=0.287 Sum_probs=51.9
Q ss_pred HHHHHHHhhccCCCCCchhH-HHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKL-EKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~-d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.-+|-.+.+ -...... +.|++.+++++++||--.+.+..||.+|...|+|++|....+++|++
T Consensus 102 a~~~~~lg~~---~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKA---LNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHH---HTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH---HHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3445555544 1123446 88999999999999999999999999999999999999999988864
No 98
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=92.43 E-value=0.1 Score=46.53 Aligned_cols=49 Identities=27% Similarity=0.262 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.+.++++.+|-..+-+.-+|++|...|+|++|....++++++
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4788999999999999999999999999999999999999999988764
No 99
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.32 E-value=0.21 Score=42.42 Aligned_cols=54 Identities=19% Similarity=0.165 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
..+.|.+.++++++.+|--.+.+..+|.+|...|++++|....++++++.-.-+
T Consensus 174 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 227 (330)
T 3hym_B 174 NSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIG 227 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTS
T ss_pred hHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcc
Confidence 478899999999999999999999999999999999999999999999874444
No 100
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.28 E-value=0.27 Score=47.39 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHHHhhCC---CcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNP---FVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLL 385 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP---~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~ 385 (399)
...+.|.+.++++++.|| -..+.+.-||.+|...|+|++|....++++++--
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 289 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDP 289 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 448899999999999999 8999999999999999999999999999988643
No 101
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.14 E-value=0.22 Score=43.44 Aligned_cols=84 Identities=21% Similarity=0.126 Sum_probs=58.4
Q ss_pred ccccccccCChhhHHHHHHHHHHhhccCCCCC------------chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccC
Q 015869 301 VFENCTRILDAKEQIEARDLYWEAVCGNSDGS------------KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKG 368 (399)
Q Consensus 301 VF~~CT~vL~~~dq~aArdlYWeav~~~~~~~------------~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~g 368 (399)
.|......+..++-..|...|=+++.-+.+.. ....+.|.+.++++++.+|-..+.+..||.+|...|
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 146 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNES 146 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Confidence 34444444455566677777777765221111 122577888888888888888888888888888888
Q ss_pred CcHHHHHHHHHHHHHH
Q 015869 369 EFEEAEREAGKGLMLL 384 (399)
Q Consensus 369 r~~eA~~~A~~gL~ll 384 (399)
++++|....++++++.
T Consensus 147 ~~~~A~~~~~~~~~~~ 162 (368)
T 1fch_A 147 LQRQACEILRDWLRYT 162 (368)
T ss_dssp CHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHhC
Confidence 8888888888877754
No 102
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.11 E-value=0.17 Score=43.32 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++++.+|--.+.+..+|.+|...|++++|...-++++++
T Consensus 287 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 287 KPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 4788999999999999999999999999999999999999998888865
No 103
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=92.09 E-value=0.26 Score=41.75 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=49.2
Q ss_pred HHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc---CchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 318 RDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV---GEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 318 rdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V---gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+|-.++. --.....+.|.+.++++++.+|.- -+-+.-||++|...|+|++|...-++.+++
T Consensus 5 ~~~~~~a~~---~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 5 NEIYATAQQ---KLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHH---HHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 445666554 223344889999999999987754 467899999999999999999998888764
No 104
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=92.04 E-value=0.24 Score=45.55 Aligned_cols=50 Identities=24% Similarity=0.173 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++++.||--...+.-+|++|...|+|++|...-+++|++
T Consensus 210 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 210 QAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44788999999999999999999999999999999999999998888876
No 105
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.99 E-value=0.047 Score=45.73 Aligned_cols=50 Identities=14% Similarity=0.099 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-..+.+..||.+|...|+|++|...-++++++
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 34788999999999999999999999999999999999998887776643
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.94 E-value=0.22 Score=44.62 Aligned_cols=47 Identities=26% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++++.+|--.+.+..|+.+|...|++++|....+++++
T Consensus 287 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 333 (388)
T 1w3b_A 287 VAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALE 333 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 44555555555555555555555555555555555555555555443
No 107
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=91.91 E-value=0.11 Score=38.72 Aligned_cols=55 Identities=29% Similarity=0.279 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHhhC------CCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 334 EKLEKAEELLLRCIEKN------PFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~N------P~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
...+.|.+.++++++.. |....-+..||++|...|++++|....++++++.-+-|
T Consensus 103 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 103 QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-
T ss_pred hhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhC
Confidence 34788999999988763 34445578899999999999999999999999875543
No 108
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.84 E-value=0.2 Score=48.51 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHhhccCCCC------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHH
Q 015869 312 KEQIEARDLYWEAVCGNSDG------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGK 379 (399)
Q Consensus 312 ~dq~aArdlYWeav~~~~~~------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~ 379 (399)
++-..|...|=+++.-+.+. .....+.|.+.++++++.||--.+.+.-||++|...|++++|...-++
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34456666666666522221 112367788888888888888888888888888888888888888888
Q ss_pred HHHH
Q 015869 380 GLML 383 (399)
Q Consensus 380 gL~l 383 (399)
++++
T Consensus 117 al~~ 120 (568)
T 2vsy_A 117 AHQL 120 (568)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7776
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.77 E-value=0.27 Score=44.32 Aligned_cols=49 Identities=20% Similarity=0.070 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|..+++++++++|--..-+.-||.+|...|+|++|+..-+++|++
T Consensus 181 ~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 181 KLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3666777777777777766666666777777777777777777776653
No 110
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.69 E-value=0.14 Score=46.81 Aligned_cols=75 Identities=19% Similarity=0.130 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHhhccCCCCCch--hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 312 KEQIEARDLYWEAVCGNSDGSKE--KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 312 ~dq~aArdlYWeav~~~~~~~~~--~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
++...|...|=+++.-+.+.... ..+.++.+++++++.||-..+-+..|+.+|...|++++|...-+++|++=-.
T Consensus 386 ~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~ 462 (472)
T 4g1t_A 386 KCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSL 462 (472)
T ss_dssp SCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC---------------
T ss_pred CCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 34456778888887622222111 1566888899999999999999999999999999999999999999986443
No 111
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=91.65 E-value=0.22 Score=41.26 Aligned_cols=47 Identities=11% Similarity=0.051 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++++.+|-..+-+..||++|...|++++|....+++++
T Consensus 157 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 157 PAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56677777777777777777777777777777777777777666654
No 112
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=91.62 E-value=0.19 Score=42.38 Aligned_cols=53 Identities=30% Similarity=0.357 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 334 EKLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
...+.|.+.++++++. +|....-+..||++|...|++++|....++++++.-+
T Consensus 167 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 167 GKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3478899999999998 8999999999999999999999999999999987543
No 113
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=91.51 E-value=0.2 Score=49.00 Aligned_cols=51 Identities=22% Similarity=0.152 Sum_probs=41.2
Q ss_pred chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
....++|.+.++++++.||-..+-+.-||++|...|+|++|....++++++
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 69 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL 69 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 344778888888888888888888888888888888888888888887764
No 114
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=91.47 E-value=0.27 Score=44.39 Aligned_cols=48 Identities=19% Similarity=0.150 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|..+++++++.+|-..+-+..+|.+|...|++++|....++++++
T Consensus 42 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 42 LADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 566666666666666666666666666666666666666666665553
No 115
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=91.40 E-value=0.27 Score=46.35 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++++.+|-..+.+..|+.+|...|++++|....++++++
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3788999999999999998899999999999999999999999998876
No 116
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.33 E-value=0.33 Score=44.63 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcC---------------chHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVG---------------EPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~Vg---------------EP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.||-.. ..+.-||++|+..|+|++|.....++|++
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 448899999999999999984 88999999999999999999999999886
No 117
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=91.28 E-value=0.34 Score=47.26 Aligned_cols=79 Identities=24% Similarity=0.326 Sum_probs=60.9
Q ss_pred cccccccccccCChhhHHHHHHHHHHhhcc-----C-CCC--CchhHHHHHHHHHHHHhhCCC--cCchHHHHHHHHhc-
Q 015869 298 VPPVFENCTRILDAKEQIEARDLYWEAVCG-----N-SDG--SKEKLEKAEELLLRCIEKNPF--VGEPHVVLGQIYLA- 366 (399)
Q Consensus 298 iPPVF~~CT~vL~~~dq~aArdlYWeav~~-----~-~~~--~~~~~d~a~~lL~~~i~~NP~--VgEP~~vLAQ~~l~- 366 (399)
++..+.+|. ..-+-.|||.+|.- . ..+ -......|+.+++++|+++|- -|..|.+|+-+|..
T Consensus 140 ~~~~l~~~~-------~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~v 212 (301)
T 3u64_A 140 LHKVLSRCT-------RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAA 212 (301)
T ss_dssp HHHHHTTCC-------GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcC-------ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhC
Confidence 455555554 33577899999842 1 111 122267899999999999999 68899999999999
Q ss_pred ----cCCcHHHHHHHHHHHHH
Q 015869 367 ----KGEFEEAEREAGKGLML 383 (399)
Q Consensus 367 ----~gr~~eA~~~A~~gL~l 383 (399)
-|..+.|+++=++||++
T Consensus 213 Pp~~gGd~ekA~~~ferAL~L 233 (301)
T 3u64_A 213 PESFGGGMEKAHTAFEHLTRY 233 (301)
T ss_dssp CTTTTCCHHHHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHHHHh
Confidence 49999999999999986
No 118
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=91.24 E-value=0.32 Score=44.26 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
....+.|.+.++++++.+|-..+.+..||++|...|++++|...-++++++-
T Consensus 428 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 479 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLA 479 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 3458899999999999999999999999999999999999999999988863
No 119
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=91.24 E-value=0.3 Score=36.37 Aligned_cols=51 Identities=25% Similarity=0.244 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhhCCCcCc------hHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 336 LEKAEELLLRCIEKNPFVGE------PHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgE------P~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.+.|.+.++++++..|-.+. -+..+|.+|...|+|++|....++++++.-.
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 55566666666665554443 3445666666666666666666666665544
No 120
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.15 E-value=0.33 Score=44.80 Aligned_cols=50 Identities=26% Similarity=0.309 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-..+-+.-||++|...|++++|...-++++++
T Consensus 442 ~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 442 EKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 44789999999999999999999999999999999999999999988876
No 121
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=91.03 E-value=0.32 Score=39.47 Aligned_cols=50 Identities=20% Similarity=0.137 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHhhCCCcC----------------chHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVG----------------EPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~Vg----------------EP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.++++++.+|-.. +.+.-||.+|...|++++|...-++++++
T Consensus 85 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 85 EKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp TCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 347889999999999777655 89999999999999999999998888765
No 122
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=90.96 E-value=0.33 Score=45.93 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=53.4
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
-+.-++--+.| -......+.|.+.++++++.+|--.+.+.-+|++|...|+|++|...-++++++
T Consensus 272 ~~~~~~nla~~---~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 272 ALSCVLNIGAC---KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHH---HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34445555555 223344889999999999999999999999999999999999999999999876
No 123
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.78 E-value=0.32 Score=47.12 Aligned_cols=74 Identities=12% Similarity=-0.037 Sum_probs=58.3
Q ss_pred hhhHHHHHHHHHHhhccCCCCC------------chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhcc---CCcHHHHH
Q 015869 311 AKEQIEARDLYWEAVCGNSDGS------------KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAK---GEFEEAER 375 (399)
Q Consensus 311 ~~dq~aArdlYWeav~~~~~~~------------~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~---gr~~eA~~ 375 (399)
.++-..|...|=+++.-+.+.. ....+.|.+.++++++.||--.+.+.-||++|... |++++|..
T Consensus 70 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~ 149 (568)
T 2vsy_A 70 QQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSA 149 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHH
Confidence 3556677777777776322221 22368899999999999998889999999999999 99999999
Q ss_pred HHHHHHHHH
Q 015869 376 EAGKGLMLL 384 (399)
Q Consensus 376 ~A~~gL~ll 384 (399)
..++++++-
T Consensus 150 ~~~~al~~~ 158 (568)
T 2vsy_A 150 QVRAAVAQG 158 (568)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 988888764
No 124
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=90.73 E-value=0.37 Score=43.01 Aligned_cols=51 Identities=24% Similarity=0.282 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHhhCCCc--CchHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFV--GEPHVVLGQIYLAKGEFEEAEREAGKGLMLLL 385 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~V--gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~ 385 (399)
..+.|.+.+++++++||-- ++.+.-|+++|...|+.++|.....++|..++
T Consensus 234 ~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~~l 286 (287)
T 3qou_A 234 RNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYALL 286 (287)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHHhh
Confidence 3788999999999999988 77899999999999999999999999998775
No 125
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=90.65 E-value=0.29 Score=51.35 Aligned_cols=51 Identities=8% Similarity=0.096 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.++|.+.+++++++||--.+.+.-|+++|...|+|++|++.-++++++.-.
T Consensus 127 ~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 127 IPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChh
Confidence 456666666666666666666666666666666666666666666666543
No 126
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.50 E-value=0.38 Score=39.92 Aligned_cols=50 Identities=10% Similarity=-0.081 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHHHhhCC-CcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNP-FVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP-~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+.+.++++.+| --...+.-+|.+|...|+|++|....++++++
T Consensus 21 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 71 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK 71 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh
Confidence 448899999999999998 66678888999999999999999999988864
No 127
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=90.43 E-value=0.66 Score=38.79 Aligned_cols=69 Identities=13% Similarity=0.062 Sum_probs=44.0
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc----CchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV----GEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V----gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
+-+++..+.+ -......+.|...++++++.+|-- +.-+..||.+|...|+|++|....++++++...-+
T Consensus 5 ~~~l~~~g~~---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 5 CLELALEGER---LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH---HHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccc
Confidence 3445555543 112233677888888888877653 23345677888888888888888777777654433
No 128
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=90.42 E-value=0.29 Score=44.20 Aligned_cols=49 Identities=14% Similarity=0.078 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++++.+|-..+-+..||.+|...|++++|....++++++
T Consensus 310 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 310 KPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEH 358 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4788999999999999998999999999999999999999999988764
No 129
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=90.41 E-value=0.19 Score=44.93 Aligned_cols=53 Identities=25% Similarity=0.147 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhCCCcCch-----HHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 336 LEKAEELLLRCIEKNPFVGEP-----HVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
.+.|++.++++++..|-.|.| +..||.+|...|++++|....++++++.-..+
T Consensus 151 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~ 208 (373)
T 1hz4_A 151 LDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGK 208 (373)
T ss_dssp HHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccC
Confidence 567777777777777766654 34577777777888888777777777654443
No 130
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=90.06 E-value=0.41 Score=42.66 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHhhCCCcCch------HHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 335 KLEKAEELLLRCIEKNPFVGEP------HVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP------~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
..+.|++.++++++..|=.|.| +..|+.+|...|+|++|....++++++.-+-|..
T Consensus 68 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 68 ELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc
Confidence 4788999999999998888888 4568999999999999999999999988766543
No 131
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.77 E-value=0.34 Score=47.99 Aligned_cols=79 Identities=13% Similarity=0.118 Sum_probs=61.9
Q ss_pred ccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHH
Q 015869 305 CTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAERE 376 (399)
Q Consensus 305 CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~ 376 (399)
..++|.+..--.|+-+.==+.. -.....+++|+++.+++++. +|-||--..-||.+|.+.|+|+||+.-
T Consensus 328 ~~~~lg~~Hp~~a~~~~nLa~~---y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~ 404 (433)
T 3qww_A 328 MSSVFEDSNVYMLHMMYQAMGV---CLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKA 404 (433)
T ss_dssp HTTTBCTTSHHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhCccChhchHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 3567777777777666544332 11234589999999999854 888999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 015869 377 AGKGLMLLLE 386 (399)
Q Consensus 377 A~~gL~ll~~ 386 (399)
-+++|+.+..
T Consensus 405 ~~~Al~i~~~ 414 (433)
T 3qww_A 405 LKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 132
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=89.30 E-value=0.39 Score=46.32 Aligned_cols=64 Identities=20% Similarity=0.118 Sum_probs=53.2
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
+.-+|.-+.| -......+.|...+.++++.||---..+.-+|++|+..|+|++|...-.++|++
T Consensus 317 ~~~~~nla~~---~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 317 LAAFLNLAMC---YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH---HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4455556665 223445889999999999999999999999999999999999999999888865
No 133
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.29 E-value=0.32 Score=47.71 Aligned_cols=80 Identities=18% Similarity=0.132 Sum_probs=61.8
Q ss_pred cccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHh--------hCCCcCchHHHHHHHHhccCCcHHHHH
Q 015869 304 NCTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIE--------KNPFVGEPHVVLGQIYLAKGEFEEAER 375 (399)
Q Consensus 304 ~CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~--------~NP~VgEP~~vLAQ~~l~~gr~~eA~~ 375 (399)
...++|.+...-.|+-+.==+.. -.....+++|+++.+++++ .+|-||--..-||.+|.+.|+|+||+.
T Consensus 316 ~~~~~lg~~h~~~~~~~~~L~~~---y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~ 392 (429)
T 3qwp_A 316 SNSERLPDINIYQLKVLDCAMDA---CINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMK 392 (429)
T ss_dssp CSSCCCCTTSHHHHHHHHHHHHH---HHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hccCcCCccchHHHHHHHHHHHH---HHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 34577887777777665544332 1123458999999999884 478889999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 015869 376 EAGKGLMLLLE 386 (399)
Q Consensus 376 ~A~~gL~ll~~ 386 (399)
--+++|+.+..
T Consensus 393 ~~~~Al~i~~~ 403 (429)
T 3qwp_A 393 NLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 134
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=89.13 E-value=0.24 Score=44.27 Aligned_cols=56 Identities=20% Similarity=0.150 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHhh------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 334 EKLEKAEELLLRCIEK------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
...+.|.+.++++++. +|....-+..||++|...|+|++|....++++++.-.-+.
T Consensus 100 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 161 (411)
T 4a1s_A 100 GDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGD 161 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc
Confidence 3478899999999998 7888899999999999999999999999999998766553
No 135
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.13 E-value=0.69 Score=42.11 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
...+.|...+.++++.+|-..+.+..+|.+|...|++++|....++++++.-...
T Consensus 352 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 406 (514)
T 2gw1_A 352 NKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLD 406 (514)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 4488999999999999999999999999999999999999999999988765543
No 136
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.80 E-value=0.57 Score=42.31 Aligned_cols=56 Identities=21% Similarity=0.288 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHHh-----hC-CCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 334 EKLEKAEELLLRCIE-----KN-PFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~-----~N-P~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
...++|.+.++++++ .+ |....-...||.+|...|++++|....++++++.-.-|.
T Consensus 238 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 299 (383)
T 3ulq_A 238 SQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGD 299 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 448899999999999 67 888888999999999999999999999999998766554
No 137
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=88.64 E-value=1.2 Score=37.62 Aligned_cols=50 Identities=10% Similarity=0.067 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHHHhhCCCcCch-----------------HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEP-----------------HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP-----------------~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...++|...++++|+++|---.. ++.+|++|...|+|++|...-++.++.
T Consensus 110 ~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 176 (225)
T 2yhc_A 110 QQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRD 176 (225)
T ss_dssp HHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 44788888999999888865443 367899999999999999998888765
No 138
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=88.61 E-value=0.3 Score=40.87 Aligned_cols=55 Identities=20% Similarity=0.093 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHhh------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 335 KLEKAEELLLRCIEK------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
..+.|.+.++++++. +|....-+..||++|...|+|++|....++++++.-.-+.
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 118 (338)
T 3ro2_A 58 DYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELND 118 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC
Confidence 478899999998887 6667777889999999999999999999999998876554
No 139
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=88.56 E-value=0.47 Score=45.75 Aligned_cols=46 Identities=15% Similarity=0.089 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHhhCC--CcCchHHHHHHHHhccCCcHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNP--FVGEPHVVLGQIYLAKGEFEEAEREAGKG 380 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP--~VgEP~~vLAQ~~l~~gr~~eA~~~A~~g 380 (399)
..+.|.++|.+.|..|| -.=|+.++++|+|+.+||.+.|++..++.
T Consensus 115 ~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 115 DLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 37889999999999998 78899999999999999999999988654
No 140
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=88.55 E-value=0.89 Score=41.92 Aligned_cols=67 Identities=16% Similarity=-0.042 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcC-----------------chHHHHHHHHhccCCcHHHHHH
Q 015869 314 QIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVG-----------------EPHVVLGQIYLAKGEFEEAERE 376 (399)
Q Consensus 314 q~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~Vg-----------------EP~~vLAQ~~l~~gr~~eA~~~ 376 (399)
...|..++-.+.+ -......+.|...++++++.+|--. .-+.-||++|+..|+|++|...
T Consensus 176 ~~~a~~~~~~g~~---~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 176 IGAADRRKMDGNS---LFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHH---TCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3456666666655 3344558899999999999998644 3678899999999999999999
Q ss_pred HHHHHHH
Q 015869 377 AGKGLML 383 (399)
Q Consensus 377 A~~gL~l 383 (399)
..++|++
T Consensus 253 ~~~al~~ 259 (338)
T 2if4_A 253 CNIVLTE 259 (338)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999876
No 141
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=88.41 E-value=0.46 Score=42.44 Aligned_cols=56 Identities=23% Similarity=0.294 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHhhCCCcCc------hHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 335 KLEKAEELLLRCIEKNPFVGE------PHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgE------P~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
..+.|.+.++++++.+|-.+. -+..||.+|...|++++|....++++++.-.-|..
T Consensus 238 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 238 DFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred ChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 367788888888887776666 66778888888888888888888888877665543
No 142
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=88.30 E-value=0.36 Score=44.59 Aligned_cols=53 Identities=9% Similarity=0.032 Sum_probs=46.4
Q ss_pred CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 332 SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 332 ~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.....+.|...+.++++.+|--...+.-+|++|...|+|++|...-++++++-
T Consensus 242 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 242 KLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp TTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 33447899999999999999999999999999999999999999998887653
No 143
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.16 E-value=0.44 Score=48.51 Aligned_cols=48 Identities=17% Similarity=0.062 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.|.+.++++++.||--.+.+..+|.+|+..|+|++|...-+++|++
T Consensus 449 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 449 VAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999999999876
No 144
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=88.12 E-value=0.62 Score=46.37 Aligned_cols=48 Identities=23% Similarity=0.192 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|...+++++++||-+ --+++|+.+|.-.|++++|.++.++|++|
T Consensus 292 d~d~A~~~l~rAl~Ln~s~-~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 292 KTDESYQAINTGIDLEMSW-LNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp CHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 4788999999999999974 34578899999999999999999999987
No 145
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=88.08 E-value=0.72 Score=40.39 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=48.4
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc----CchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV----GEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V----gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
.+..++..+.+ -......+.|...++++++.+|-- .+-+..||.+|...|+|++|....++++++.-.-+
T Consensus 8 ~~~~l~~~g~~---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 81 (406)
T 3sf4_A 8 SCLELALEGER---LCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 81 (406)
T ss_dssp CHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH---HHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Confidence 34455555554 112334778888888888888753 23456788888888888888888888887755433
No 146
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=87.92 E-value=0.69 Score=45.14 Aligned_cols=49 Identities=10% Similarity=0.077 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHhhCCC-cCchHHHHHHHHhc-cCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPF-VGEPHVVLGQIYLA-KGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~-VgEP~~vLAQ~~l~-~gr~~eA~~~A~~gL~l 383 (399)
+.++|++++++++++||= --.|++-.|+.|+. .|++++|.+.-+++|++
T Consensus 219 d~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 378999999999999994 58999999999999 59999999999998863
No 147
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.73 E-value=0.45 Score=43.19 Aligned_cols=56 Identities=13% Similarity=0.030 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHh-----hCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 334 EKLEKAEELLLRCIE-----KNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~-----~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
...++|.+.+.++++ .+|........||.+|...|++++|....++++++.-.-|+
T Consensus 236 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 296 (378)
T 3q15_A 236 GDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSH 296 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 347899999999999 89999888999999999999999999999999998655444
No 148
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=87.08 E-value=0.55 Score=46.44 Aligned_cols=52 Identities=15% Similarity=0.002 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 335 KLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
..+.|+++++++++. ||.|..-.--||++|.+.|+|++|+...+++|.....
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 368899999999875 6777777777999999999999999999999987653
No 149
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=86.77 E-value=1.2 Score=40.77 Aligned_cols=47 Identities=21% Similarity=0.140 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|...++++++.||-..+.+..||.+|...|+|++|+..-+++|+
T Consensus 316 ~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~ 362 (472)
T 4g1t_A 316 IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFS 362 (472)
T ss_dssp HHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHh
Confidence 56788899999999999999999999999999999999988888775
No 150
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=86.13 E-value=0.82 Score=40.03 Aligned_cols=52 Identities=25% Similarity=0.235 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhhCCCcCc------hHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 336 LEKAEELLLRCIEKNPFVGE------PHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgE------P~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.+.|.+.++++++..|=.+. -+..||.+|...|++++|.....+++++.-.-
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC
Confidence 55566666666655544444 44555666666666666666666666555443
No 151
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=86.11 E-value=0.57 Score=47.07 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=61.3
Q ss_pred ccccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHh--------hCCCcCchHHHHHHHHhccCCcHHHH
Q 015869 303 ENCTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIE--------KNPFVGEPHVVLGQIYLAKGEFEEAE 374 (399)
Q Consensus 303 ~~CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~--------~NP~VgEP~~vLAQ~~l~~gr~~eA~ 374 (399)
+...++|.+..-..|+.+.==+.. -.....++.|+.+.+++++ .+|-|+--..=||.+|.+.|+|+||+
T Consensus 337 ~~~~~~lg~~Hp~~a~~~~nLa~~---y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~ 413 (490)
T 3n71_A 337 EKQEPVFADTNLYVLRLLSIASEV---LSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGH 413 (490)
T ss_dssp HHHTTTBCTTSHHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 445677777776666665544432 1122448899999999885 37888888899999999999999999
Q ss_pred HHHHHHHHHHHh
Q 015869 375 REAGKGLMLLLE 386 (399)
Q Consensus 375 ~~A~~gL~ll~~ 386 (399)
..-+++|+.+..
T Consensus 414 ~~~~~Al~i~~~ 425 (490)
T 3n71_A 414 GMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 152
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=85.72 E-value=0.79 Score=43.90 Aligned_cols=47 Identities=11% Similarity=-0.093 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.|.+.++++|++||--.+-+.-++.+|...|+|++|...-.++|+
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 44455555555555555555555555555555555555555544444
No 153
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=85.68 E-value=1 Score=43.40 Aligned_cols=65 Identities=17% Similarity=0.011 Sum_probs=51.8
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc---------------CchHHHHHHHHhccCCcHHHHHHHHHH
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV---------------GEPHVVLGQIYLAKGEFEEAEREAGKG 380 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V---------------gEP~~vLAQ~~l~~gr~~eA~~~A~~g 380 (399)
.|..++-.+.+ -......+.|...+.++++.||-. ..-+.-||++|+..|+|++|.....++
T Consensus 267 ~a~~~~~~G~~---~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 267 QAAIVKEKGTV---YFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34455555543 123344889999999999999988 477889999999999999999999999
Q ss_pred HHH
Q 015869 381 LML 383 (399)
Q Consensus 381 L~l 383 (399)
|++
T Consensus 344 l~~ 346 (457)
T 1kt0_A 344 LGL 346 (457)
T ss_dssp HHH
T ss_pred Hhc
Confidence 886
No 154
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=85.61 E-value=1.1 Score=43.00 Aligned_cols=49 Identities=14% Similarity=-0.053 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCC-cHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGE-FEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr-~~eA~~~A~~gL~l 383 (399)
..+.|.+.++++|++||=-.+-+.-++.+|...|+ |++|....+++|++
T Consensus 112 ~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l 161 (382)
T 2h6f_A 112 RSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE 161 (382)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999998 99999999999875
No 155
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=85.52 E-value=2 Score=38.09 Aligned_cols=48 Identities=10% Similarity=-0.109 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
..+.|.++++++++++|--.+-++-+++++...|++++|...-+++++
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT 231 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 367888999999999998888888888999999999999888888876
No 156
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=85.24 E-value=0.7 Score=34.62 Aligned_cols=36 Identities=14% Similarity=-0.103 Sum_probs=30.3
Q ss_pred hCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 349 KNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 349 ~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
+||--.+.+..||.+|...|+|++|...-++++++-
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 37 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETD 37 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 577778889999999999999999999999998863
No 157
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=84.66 E-value=0.55 Score=44.44 Aligned_cols=64 Identities=14% Similarity=0.070 Sum_probs=50.4
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHh----------------hCCCcCchHHHHHHHHhccCCcHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIE----------------KNPFVGEPHVVLGQIYLAKGEFEEAEREAGKG 380 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~----------------~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~g 380 (399)
|..++-.+.. -......+.|.+.++++++ .+|....-+.-||++|+..|+|++|....+++
T Consensus 223 a~~~~~~g~~---~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 223 SEDLKNIGNT---FFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 4444544443 1123348889999999998 77888888899999999999999999999999
Q ss_pred HHH
Q 015869 381 LML 383 (399)
Q Consensus 381 L~l 383 (399)
|++
T Consensus 300 l~~ 302 (370)
T 1ihg_A 300 LEI 302 (370)
T ss_dssp HTT
T ss_pred HHh
Confidence 875
No 158
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=84.53 E-value=0.94 Score=39.86 Aligned_cols=48 Identities=15% Similarity=0.154 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccC-----------CcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKG-----------EFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~g-----------r~~eA~~~A~~gL~l 383 (399)
.+.|...+++||+.||=-.+-+.-|+.+|.+.| +|++|...=.++|++
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999875 899999988888875
No 159
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=84.24 E-value=1.2 Score=45.20 Aligned_cols=49 Identities=12% Similarity=-0.049 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHH--------hhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCI--------EKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i--------~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|.+.+++++ +.||--.+.++.+|.+|+..|+|++|....++++++
T Consensus 406 ~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~ 462 (681)
T 2pzi_A 406 QPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAER 462 (681)
T ss_dssp CHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Confidence 3788999999999 999999999999999999999999999999999876
No 160
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=84.00 E-value=1.5 Score=41.19 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.+.|.++++++++.+|-..+-+..|+.+|...|++++|...-++++++.
T Consensus 457 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 505 (597)
T 2xpi_A 457 ILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLV 505 (597)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 5667777777777777666667777777777777777777777776653
No 161
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=83.83 E-value=1.4 Score=39.05 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=57.3
Q ss_pred hhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchH------HHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 311 AKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPH------VVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 311 ~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~------~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
+.+-..|.+.|=++.. .-......+.|.+.++++++.+|=.|.|. .-|+.+|...|+|++|...-++++++.
T Consensus 30 ~~~~~~A~~~~~~a~~--~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 30 SYKFEEAADLCVQAAT--IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH--HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 4445666777776642 11122337889999999999877666654 458999999999999999999999988
Q ss_pred HhhCC
Q 015869 385 LEWGS 389 (399)
Q Consensus 385 ~~WG~ 389 (399)
.+-|.
T Consensus 108 ~~~g~ 112 (292)
T 1qqe_A 108 THRGQ 112 (292)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 66553
No 162
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=83.56 E-value=1 Score=45.21 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLL 385 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~ 385 (399)
..+.|+++++++++. ||.|..-.--||.+|...|+|++|+...+++|+...
T Consensus 324 ~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~ 382 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYM 382 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 478899999999875 666777777799999999999999999999998754
No 163
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=83.54 E-value=0.86 Score=44.72 Aligned_cols=52 Identities=15% Similarity=-0.005 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHhh--------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 335 KLEKAEELLLRCIEK--------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~--------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
..+.|+++.++++++ ||.+..-.--||++|.+.|+|++|+...+++|+....
T Consensus 302 ~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHH
Confidence 368899999999975 6666666667899999999999999999999987653
No 164
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, mangan PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=81.91 E-value=3.5 Score=41.27 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=70.6
Q ss_pred chHHHHHHhcccchhhhHhhcCCCchhHHHHHHHhCCCccccCCCChHhhHHHHHHHHHhcCCchHHHHhccchhcccCc
Q 015869 11 DYLETLVASARPFLRGELEAIDKNLPSLIAVLRSVGAGECWHKHGSFLEHLVDIYRILKIWKAPDCVCLCGLFHSAYSNS 90 (399)
Q Consensus 11 ~~~~~l~~~arpfLr~e~~~~D~~Lp~ll~~Lr~~GAge~~Hk~GTf~~HL~~V~~iL~~Wgap~~V~~AGLfHSaYGt~ 90 (399)
-.+..++..++.++-.+-.. .+-.-+.+-...-+|+.-..+.....|.++|..||+.+|...+...|||+|-+.=.
T Consensus 7 ~~~~~l~~~~~~~~~~~~~~---~l~~A~~~A~~aH~gQ~rksGePYi~Hpl~VA~iLa~l~~D~~~i~AALLHDvvED- 82 (393)
T 1vj7_A 7 LTGEEVVALAAKYMNETDAA---FVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVED- 82 (393)
T ss_dssp CCHHHHHHHHHHHSCHHHHH---HHHHHHHHHHHHTTTCBCTTSCBTTHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHH-
T ss_pred CCHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHhccCcCCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHhhhHHhc-
Confidence 34567777777666443111 12333445555566666544446899999999999999999999999999976532
Q ss_pred cccccCCCCCcchHHHHHhhchhhhHHhhhhccc
Q 015869 91 YVNLAIFDPNTGRDVVRGHVGDAAEKLIHLFCIV 124 (399)
Q Consensus 91 ~f~laifdp~~~R~~vr~lIG~~AE~LVylfct~ 124 (399)
.....++|++..|++.-.||---.-+
T Consensus 83 --------t~~t~e~I~~~FG~~Va~lV~gvTk~ 108 (393)
T 1vj7_A 83 --------TDITLDNIEFDFGKDVRDIVDGVTKL 108 (393)
T ss_dssp --------SSCCHHHHHHHHCHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHhCHHHHHHHHHHHhc
Confidence 12457789999999988888654433
No 165
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=81.78 E-value=2 Score=36.59 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGLML 383 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~l 383 (399)
....++|.+.++++++.+| .+.+.-|+.+|.+ .|++++|...-++++++
T Consensus 199 ~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~ 251 (273)
T 1ouv_A 199 TKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 251 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHc
Confidence 4458899999999999998 6778899999999 99999999988888765
No 166
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=81.55 E-value=1.5 Score=38.96 Aligned_cols=69 Identities=13% Similarity=0.021 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhcc-CCCCC------------chhHHHHHHHHHHHHhhCCCcCc-hHHHHHHHHhccCCcHHHHHHHHHH
Q 015869 315 IEARDLYWEAVCG-NSDGS------------KEKLEKAEELLLRCIEKNPFVGE-PHVVLGQIYLAKGEFEEAEREAGKG 380 (399)
Q Consensus 315 ~aArdlYWeav~~-~~~~~------------~~~~d~a~~lL~~~i~~NP~VgE-P~~vLAQ~~l~~gr~~eA~~~A~~g 380 (399)
..|++.|=+||.. +.+.. ....+.|.++++++++.+|--.+ -++-+++++...|++++|...-.++
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 5677888888751 22221 12367888999999999887666 6888899999999999988888887
Q ss_pred HHH
Q 015869 381 LML 383 (399)
Q Consensus 381 L~l 383 (399)
+++
T Consensus 161 ~~~ 163 (308)
T 2ond_A 161 RED 163 (308)
T ss_dssp HTS
T ss_pred Hhc
Confidence 764
No 167
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=80.38 E-value=2.2 Score=33.33 Aligned_cols=51 Identities=10% Similarity=0.093 Sum_probs=40.2
Q ss_pred chhHHHHHHHHHHHHhhCCCcCch-------HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEP-------HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP-------~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
....+.|.+.+.++|+.+|-.... +.-|+.+|...|+|++|...-+++|+.
T Consensus 55 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 55 EKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 344889999999999998865543 445677788889999999988888763
No 168
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=79.39 E-value=1.7 Score=38.42 Aligned_cols=52 Identities=13% Similarity=-0.011 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHhhCCCcCch------HHHHHHHHhccCCcHHHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEP------HVVLGQIYLAKGEFEEAEREAGKGLMLLL 385 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP------~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~ 385 (399)
...+.|.+.+++|++.+|=.|.+ +.-|+.+|+..|+|++|...-++++++..
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 34789999999999998865544 55689999999999999999998887643
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=79.36 E-value=2.2 Score=38.05 Aligned_cols=56 Identities=16% Similarity=0.069 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCch------HHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEP------HVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGS 389 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP------~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~ 389 (399)
...+.|.+.++++++.+|-.|.+ +.-||.+|...|+|++|...-++++++..+-+.
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 45889999999999998766544 456899999999999999999999998765443
No 170
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=78.53 E-value=3.1 Score=36.53 Aligned_cols=55 Identities=16% Similarity=0.021 Sum_probs=48.0
Q ss_pred CchhHHHHHHHHHHHHhh-------CCCcCchH----HHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 332 SKEKLEKAEELLLRCIEK-------NPFVGEPH----VVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 332 ~~~~~d~a~~lL~~~i~~-------NP~VgEP~----~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.....+.|.+-..+||+. ||=-+.-+ .-++.+|...|||+||...-.++|++--+
T Consensus 69 ~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 69 GLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 334478899999999999 99888889 89999999999999999999999988543
No 171
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=78.48 E-value=2 Score=38.71 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhCCCc-------CchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 336 LEKAEELLLRCIEKNPFV-------GEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V-------gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.+.|.+.+.+|++..|=. +.-+..||.+|...|+|++|...-.+++++.-.
T Consensus 159 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 159 TYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 455666666666553222 234455566666666666666666666655443
No 172
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=77.88 E-value=3.8 Score=36.79 Aligned_cols=49 Identities=20% Similarity=0.116 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHH-HHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEA-EREAGKGLM 382 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA-~~~A~~gL~ 382 (399)
...+.|++.+++++++||--.+-+.-|+.++...|+++++ .+--+++++
T Consensus 214 g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~ 263 (291)
T 3mkr_A 214 GRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKD 263 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3478999999999999999888888999999999999875 444445544
No 173
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=77.15 E-value=2 Score=38.85 Aligned_cols=73 Identities=12% Similarity=0.148 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCc------CchHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 313 EQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFV------GEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 313 dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~V------gEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
+...+.-.||.++. -......+.|.+.++++++..+-+ ++-+.-||.+|...|++++|.....+++++.-.
T Consensus 97 ~~l~~~~~~~~g~~---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 97 GLLKYYSLFFRGMY---EFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp HHHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh
Confidence 34556667777765 223344889999999999885444 445677999999999999999999999998765
Q ss_pred hC
Q 015869 387 WG 388 (399)
Q Consensus 387 WG 388 (399)
-+
T Consensus 174 ~~ 175 (378)
T 3q15_A 174 HP 175 (378)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 174
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=76.93 E-value=2.5 Score=37.01 Aligned_cols=57 Identities=14% Similarity=0.009 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHhhCCC------cCchHHHHHHHHhccCCcHHH-HHHHHHHHHHHHhhCCC
Q 015869 334 EKLEKAEELLLRCIEKNPF------VGEPHVVLGQIYLAKGEFEEA-EREAGKGLMLLLEWGSP 390 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~------VgEP~~vLAQ~~l~~gr~~eA-~~~A~~gL~ll~~WG~~ 390 (399)
...++|.+.++++++.++- .+.-+.-+|++|...|++++| +..-.+++.+.-.-|+.
T Consensus 210 ~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~ 273 (293)
T 2qfc_A 210 SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMH 273 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcH
Confidence 4478899999999876543 466678899999999999999 77789999988777653
No 175
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=76.12 E-value=5.3 Score=34.94 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHH---hhCCCcC----chHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 334 EKLEKAEELLLRCI---EKNPFVG----EPHVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 334 ~~~d~a~~lL~~~i---~~NP~Vg----EP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
...++|.+.+.+++ +++|--. .-..-+|.+|...|+|++|....++++++...
T Consensus 169 ~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 44789999999999 6666321 34456899999999999999999999998754
No 176
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=75.88 E-value=2.1 Score=37.49 Aligned_cols=56 Identities=14% Similarity=0.161 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHhh-------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 335 KLEKAEELLLRCIEK-------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~-------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
..++|.+.++++++. +|....-..-||.+|...|+|++|.....+|+++..+-++.
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 478899999999952 33344455678999999999999999999999998776543
No 177
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=75.48 E-value=1.6 Score=38.33 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHhhCCCc-------Cc-----hHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFV-------GE-----PHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~V-------gE-----P~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
...+.|.+..+++|+.||=. -. -+.-++-++...|||+||.....++|++
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34788999999999999872 22 5677889999999999999999999998
No 178
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=75.17 E-value=2.5 Score=37.16 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcH----------HHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFE----------EAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~----------eA~~~A~~gL~l 383 (399)
.+.|.+..+++|+.||=-.|.+..++.+++..|+|+ +|...-+++|++
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l 75 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI 75 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999998865 888877777765
No 179
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=74.90 E-value=4.2 Score=31.16 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHhhC-------CCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 335 KLEKAEELLLRCIEKN-------PFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~N-------P~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+.|..-++.|+.+. +--.+.+.-||+.|...|++++|...-+++|++
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3677888888888863 122345678999999999999999999999875
No 180
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=74.76 E-value=4.7 Score=35.31 Aligned_cols=57 Identities=14% Similarity=0.054 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHhhC------CCcCchHHHHHHHHhccCC-cHHHHHHHHHHHHHHHhhCCC
Q 015869 334 EKLEKAEELLLRCIEKN------PFVGEPHVVLGQIYLAKGE-FEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~N------P~VgEP~~vLAQ~~l~~gr-~~eA~~~A~~gL~ll~~WG~~ 390 (399)
...++|.+.+.++++.+ +..+.-+..++.+|...|+ |++|...-.+|+.+.-.-|+.
T Consensus 210 ~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~ 273 (293)
T 3u3w_A 210 SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMH 273 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCH
Confidence 44788999999988764 4557888999999999995 699999999999999888864
No 181
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=73.88 E-value=7.9 Score=36.95 Aligned_cols=73 Identities=11% Similarity=-0.061 Sum_probs=55.0
Q ss_pred hhhHHHHHHHHHHhhccCCCC-------------CchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHH
Q 015869 311 AKEQIEARDLYWEAVCGNSDG-------------SKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREA 377 (399)
Q Consensus 311 ~~dq~aArdlYWeav~~~~~~-------------~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A 377 (399)
.++-..|+.+|=.|+.-.... ...+.+.|..+++++++++|--.+-++.+++++...|++++|+.--
T Consensus 369 ~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~ 448 (530)
T 2ooe_A 369 AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLF 448 (530)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHH
Confidence 445567777777776511110 0122678999999999999988888889999999999999999988
Q ss_pred HHHHHH
Q 015869 378 GKGLML 383 (399)
Q Consensus 378 ~~gL~l 383 (399)
++++..
T Consensus 449 ~~al~~ 454 (530)
T 2ooe_A 449 ERVLTS 454 (530)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 888864
No 182
>3nqw_A CG11900; stringent response, pyrophosphohydrolase, HD (histidine and acid) family ,PPGPP hydrolase, hydrolase; 2.90A {Drosophila melanogaster}
Probab=72.86 E-value=5.4 Score=35.41 Aligned_cols=77 Identities=12% Similarity=0.141 Sum_probs=56.5
Q ss_pred HHHHHHHhCCCcccc-CCC-ChHhhHHHHHHHHH-hcCC-chHHHHhccchhcccCccccccCCCCCcchHHHHHhhchh
Q 015869 38 LIAVLRSVGAGECWH-KHG-SFLEHLVDIYRILK-IWKA-PDCVCLCGLFHSAYSNSYVNLAIFDPNTGRDVVRGHVGDA 113 (399)
Q Consensus 38 ll~~Lr~~GAge~~H-k~G-Tf~~HL~~V~~iL~-~Wga-p~~V~~AGLfHSaYGt~~f~laifdp~~~R~~vr~lIG~~ 113 (399)
-+.+-....+|+.-. +.| ....|.++|..||. .+|- ......|||+|-+--. -....++|++..|++
T Consensus 12 A~~~A~~~H~gQ~rk~~~G~pyi~Hpl~VA~ila~~l~~~D~~~i~AAlLHDvvED---------t~~t~e~i~~~FG~~ 82 (179)
T 3nqw_A 12 CLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVED---------TDASFEDVEKLFGPD 82 (179)
T ss_dssp HHHHHHHHSTTCBCSSSSCCBTHHHHHHHHHHHHTTTCCCCHHHHHHHHTTTHHHH---------SSCCHHHHHHHHCHH
T ss_pred HHHHHHHHhccCcCCCCCCCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHhc---------CCCCHHHHHHHHCHH
Confidence 344455555666543 245 68999999999999 8886 7888889999976542 124678999999999
Q ss_pred hhHHhhhhcc
Q 015869 114 AEKLIHLFCI 123 (399)
Q Consensus 114 AE~LVylfct 123 (399)
.-.||---.-
T Consensus 83 Va~lV~gvtk 92 (179)
T 3nqw_A 83 VCGLVREVTD 92 (179)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHHHh
Confidence 8888865443
No 183
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=72.82 E-value=3 Score=39.86 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHH-HHhccCCcHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQ-IYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ-~~l~~gr~~eA~~~A~~gL~ll 384 (399)
.+.|++++++|++.+|-+ +-++.+++ ++-+.|++++|+..+.+.++..
T Consensus 62 ~~~a~~~~~ral~~~p~~-~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~a 110 (530)
T 2ooe_A 62 YDKVEKLFQRCLMKVLHI-DLWKCYLSYVRETKGKLPSYKEKMAQAYDFA 110 (530)
T ss_dssp HHHHHHHHHHHTTTCCCH-HHHHHHHHHHHHHTTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHccchhhHHHHHHHHHHHH
Confidence 556777777777777732 23444443 2234566666666555444433
No 184
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=72.07 E-value=3.3 Score=41.14 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=29.3
Q ss_pred hhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 348 EKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 348 ~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+|--..-+.++|-+++..|++++|..+.++||.|
T Consensus 271 ~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L 306 (372)
T 3ly7_A 271 PELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDL 306 (372)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 445665556667777888899999999999999988
No 185
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=71.51 E-value=1.3 Score=31.89 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHhhCCCc------CchHHHHHHHHhccCCcHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFV------GEPHVVLGQIYLAKGEFEEAE 374 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~V------gEP~~vLAQ~~l~~gr~~eA~ 374 (399)
...+.|.+.++++++.+|-. ++-+.-++++|...|++++|.
T Consensus 52 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 98 (111)
T 2l6j_A 52 GEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPV 98 (111)
T ss_dssp TCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred cCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 44889999999999999998 556677777777777776654
No 186
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=71.25 E-value=6.4 Score=33.39 Aligned_cols=45 Identities=22% Similarity=0.217 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~ 382 (399)
.++|.+.++++++.| ..+.+.-|+.+|.. .|++++|...-+++++
T Consensus 94 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 142 (273)
T 1ouv_A 94 TNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD 142 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHh
Confidence 556666666666665 34555666666666 6666666666665554
No 187
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=69.20 E-value=4.4 Score=27.99 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=30.6
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccC
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKG 368 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~g 368 (399)
...+.|.+.++++++.+|-..+.+.-|+++|...|
T Consensus 57 ~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 57 GDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 34789999999999999999899999999987654
No 188
>3nr1_A HD domain-containing protein 3; stringent response, pyrophosphohydrolase, HD (histidine and acid) family, PPGPP hydrolase, hydrolase; 1.90A {Homo sapiens}
Probab=67.59 E-value=6.4 Score=34.98 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=56.1
Q ss_pred HHHHHHhCCCcccc-CCC-ChHhhHHHHHHHH-HhcCC-chHHHHhccchhcccCccccccCCCCCcchHHHHHhhchhh
Q 015869 39 IAVLRSVGAGECWH-KHG-SFLEHLVDIYRIL-KIWKA-PDCVCLCGLFHSAYSNSYVNLAIFDPNTGRDVVRGHVGDAA 114 (399)
Q Consensus 39 l~~Lr~~GAge~~H-k~G-Tf~~HL~~V~~iL-~~Wga-p~~V~~AGLfHSaYGt~~f~laifdp~~~R~~vr~lIG~~A 114 (399)
+.+-....+|+.-. +.| ....|.++|..|| ..+|. ......|||+|-+-=. -....++|++..|++.
T Consensus 11 ~~~A~~aH~gQ~rk~~~G~PYi~Hpl~VA~il~~~~~~~d~~~i~AALLHDvvED---------t~~t~e~i~~~FG~~V 81 (178)
T 3nr1_A 11 ADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED---------TDTTLDEVELHFGAQV 81 (178)
T ss_dssp HHHHHHHTTTCBCSSTTCCBTTHHHHHHHHHHHHTSCCCCHHHHHHHHHTTHHHH---------SSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcccCcCCCCCCCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHhc---------CCCCHHHHHHHHCHHH
Confidence 44555566666543 235 6899999999999 68885 7888899999966542 1346789999999998
Q ss_pred hHHhhhhcc
Q 015869 115 EKLIHLFCI 123 (399)
Q Consensus 115 E~LVylfct 123 (399)
-.||---.-
T Consensus 82 a~lV~gvTk 90 (178)
T 3nr1_A 82 RRLVEEVTD 90 (178)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHHh
Confidence 888875433
No 189
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=65.09 E-value=4.6 Score=35.90 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHhhCCCcCchH------HHHHHHHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPH------VVLGQIYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~------~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
..+.|.+.+.++++.+|=.|.|+ .-++.+|...|+|++|...-+++|++..+-|
T Consensus 51 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 110 (307)
T 2ifu_A 51 QLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG 110 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Confidence 36777777777777776666654 3456777777888888887777777765544
No 190
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=64.42 E-value=9.6 Score=33.42 Aligned_cols=62 Identities=19% Similarity=0.102 Sum_probs=48.1
Q ss_pred HHHHHhhccCCCCCchhHHHHHHHHHHHHhhC-C-CcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 319 DLYWEAVCGNSDGSKEKLEKAEELLLRCIEKN-P-FVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 319 dlYWeav~~~~~~~~~~~d~a~~lL~~~i~~N-P-~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+=|--|. + ....+.+++..+|+..++.+ | ---|=..-||-.|...|+|++|.+-.+..|+.
T Consensus 37 ~ya~~Lv~--S-~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 37 EYAWCLVR--S-KYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHT--C-SSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHc--C-CCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 34455555 2 24455778999999999998 6 44556788999999999999999998888764
No 191
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=59.88 E-value=13 Score=34.94 Aligned_cols=83 Identities=20% Similarity=0.193 Sum_probs=38.9
Q ss_pred ccccccccccccCChhhHHHHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcC--------------chHHHHHH
Q 015869 297 PVPPVFENCTRILDAKEQIEARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVG--------------EPHVVLGQ 362 (399)
Q Consensus 297 ~iPPVF~~CT~vL~~~dq~aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~Vg--------------EP~~vLAQ 362 (399)
..||||+.|+ -|++.-+.-|++-. .+.+ ...+.+.+-|++-|+++|..+ .-..+|-=
T Consensus 28 ~~~~~~~~~~-~l~~~~~~~a~~eL-------~E~~-~~~~~~l~~LR~wi~~~p~l~~~l~~~~~~~~~~~dD~~LlRF 98 (316)
T 3hx3_A 28 DHGPVFGPCS-QLPRHTLQKAKDEL-------NERE-ETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRF 98 (316)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHTTTCCHHHHHHH
T ss_pred cCCccccCCC-CCCHHHHHHHHHHh-------CCCh-HHHHHHHHHHHHHHHhCCCccccccccccccCCCCCHHHHHHH
Confidence 5799999999 89999888887642 2322 336778899999999999764 33567766
Q ss_pred HHhccCCcHHHHHHHHHHHHHHHhhC
Q 015869 363 IYLAKGEFEEAEREAGKGLMLLLEWG 388 (399)
Q Consensus 363 ~~l~~gr~~eA~~~A~~gL~ll~~WG 388 (399)
+..+..+.+.|.+.-..-++.=.+++
T Consensus 99 LRarkfdv~kA~~~L~~~l~wR~~~~ 124 (316)
T 3hx3_A 99 IRARKFNVGRAYELLRGYVNFRLQYP 124 (316)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHhCc
Confidence 66677777777777666665555554
No 192
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=59.67 E-value=13 Score=35.87 Aligned_cols=50 Identities=24% Similarity=0.383 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+++.+.+.+.+.|+.||=--.-+..|.|++|=.|.|+-|.++-....+|
T Consensus 11 g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l 60 (273)
T 1zbp_A 11 GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKL 60 (273)
T ss_dssp TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 34888999999999999999999999999999999999999886655443
No 193
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=54.37 E-value=10 Score=32.01 Aligned_cols=49 Identities=14% Similarity=0.015 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhcc-C-----CcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAK-G-----EFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~-g-----r~~eA~~~A~~gL~l 383 (399)
.+.++|.+.+++++++ |-..+.+.-|+.+|... | ++++|..--++++++
T Consensus 143 ~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 143 EDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp CCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 3477888888888888 66667888888888775 3 788888777777654
No 194
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=49.98 E-value=28 Score=34.02 Aligned_cols=48 Identities=19% Similarity=0.104 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhhCCCc---Cch-----HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV---GEP-----HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V---gEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.+++-|..|+..-|-. |-+ ..+||.|||.+|+|++|...|.+.+..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 445555566666665532 332 578999999999999999999988764
No 195
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=48.92 E-value=29 Score=34.03 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhCCCc---Cch-----HHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV---GEP-----HVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V---gEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.+++-|..|+..-|-. |-+ +.+||.|||.+|+|++|...|.+.+.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 566677777777776642 222 57899999999999999999998775
No 196
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=48.68 E-value=35 Score=27.25 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.-.++|..++.+||+. -++|+|++|...-..|+++|+..
T Consensus 10 ~~l~~Ai~lv~~Ave~---------------D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVEL---------------DAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp CHHHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---------------HHhCCHHHHHHHHHHHHHHHHHH
Confidence 3478999999999876 78999999999999999998864
No 197
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=48.26 E-value=24 Score=34.74 Aligned_cols=48 Identities=10% Similarity=0.165 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+++..+.++|+..+|+..+=++-.|+.+...|+.++|..--++|++.
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 456889999999999999888999999999999999999999999986
No 198
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.24 E-value=24 Score=31.69 Aligned_cols=55 Identities=9% Similarity=0.143 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhh------CCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhCCC
Q 015869 336 LEKAEELLLRCIEK------NPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEWGSP 390 (399)
Q Consensus 336 ~d~a~~lL~~~i~~------NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~WG~~ 390 (399)
.+.|..++.+++.. +|...|=++.++++|+..|+|+.|...-.++++.....+.+
T Consensus 151 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 211 (434)
T 4b4t_Q 151 YKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCP 211 (434)
T ss_dssp HHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCc
Confidence 55666666666654 56666677888889999999999988888888777666554
No 199
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=47.88 E-value=32 Score=32.98 Aligned_cols=50 Identities=12% Similarity=-0.032 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLL 385 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~ 385 (399)
.+.|...|++.++.+|+-=+.|-.|-..|...||..+|.++=++.-++|.
T Consensus 187 ~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 187 ASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 66788899999999999999999999999999999999988776666553
No 200
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=47.34 E-value=40 Score=26.06 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
..+++|..++.+||+. -++|+|++|......|+++|+..
T Consensus 8 ~~l~~A~~l~~~Av~~---------------D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDL---------------DTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp CHHHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 3478899999999743 78999999999999999988764
No 201
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=46.88 E-value=26 Score=30.56 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=46.4
Q ss_pred HHhhccCCCCCchhHHHHHHHHHHHHhhCC-CcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 322 WEAVCGNSDGSKEKLEKAEELLLRCIEKNP-FVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 322 Weav~~~~~~~~~~~d~a~~lL~~~i~~NP-~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
|--|. | ....+..++..||+..+..+| -.-|=...||--|.+.|+|++|.+-++.-|+
T Consensus 48 w~Lv~--S-~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 48 WGLIK--S-TDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHH--S-SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHc--C-CCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 66666 3 344557789999999999987 4566688999999999999999998886554
No 202
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=46.72 E-value=28 Score=27.67 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 337 EKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 337 d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.+|.+++.+||+. -++|+|++|..--..|+++|+.+
T Consensus 14 ~~A~~lv~~Ave~---------------D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 14 TAAATVLKRAVEL---------------DSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 4688888888876 78999999999999999998875
No 203
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.45 E-value=32 Score=30.88 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhCCCcCch-----------------HHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Q 015869 336 LEKAEELLLRCIEKNPFVGEP-----------------HVVLGQIYLAKGEFEEAEREAGKGLMLLLE 386 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP-----------------~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~ 386 (399)
.+.|++.+.+++.++|=.++. -.-|+++|...|+|++|...-..+++.+..
T Consensus 20 y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 20 YNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp HHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 566777777777777655543 356899999999999999887777766543
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=45.44 E-value=26 Score=27.82 Aligned_cols=45 Identities=24% Similarity=0.254 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~ 382 (399)
.++|.+.++++++.+ ..+-+.-|+.+|.+ .+++++|..--+++.+
T Consensus 41 ~~~A~~~~~~Aa~~g--~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 89 (138)
T 1klx_A 41 KQKLFQYLSKACELN--SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG 89 (138)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHc
Confidence 455777777777763 12445667777776 6677777666555544
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=43.66 E-value=19 Score=25.55 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=23.7
Q ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 357 HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 357 ~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+-+|++|+..|+|++|....++++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 29 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQT 29 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456899999999999999999988875
No 206
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=42.60 E-value=38 Score=33.17 Aligned_cols=48 Identities=25% Similarity=0.222 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhCCCc---Cch-----HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV---GEP-----HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V---gEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.+++=|..|+.+-|-. |-+ ..+||.|||.+|+|++|...|.+.+..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 445555566666655532 332 578999999999999999999988764
No 207
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=42.07 E-value=61 Score=27.09 Aligned_cols=52 Identities=17% Similarity=0.160 Sum_probs=41.7
Q ss_pred CchhHHHHHHHHHHHHhhCCC--cCchHHHHHHHHhc----cCCcHHHHHHHHHHHHH
Q 015869 332 SKEKLEKAEELLLRCIEKNPF--VGEPHVVLGQIYLA----KGEFEEAEREAGKGLML 383 (399)
Q Consensus 332 ~~~~~d~a~~lL~~~i~~NP~--VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~l 383 (399)
...+.++|.+.++++++.+|. ..+-+.-|+.+|.. .+++++|..--++++++
T Consensus 101 ~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 101 GATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp SSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 334577888888899999884 57778899999998 88899998887777664
No 208
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.92 E-value=44 Score=33.21 Aligned_cols=48 Identities=19% Similarity=0.120 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhhCCCc------Cc-----hHHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV------GE-----PHVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V------gE-----P~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
.+.+++-|..|+..-|-. |- =..+||.|||.+|+|++|...|.+.+..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 455556666666665531 22 2478999999999999999999988763
No 209
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.88 E-value=49 Score=32.52 Aligned_cols=27 Identities=26% Similarity=0.213 Sum_probs=24.0
Q ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHH
Q 015869 357 HVVLGQIYLAKGEFEEAEREAGKGLML 383 (399)
Q Consensus 357 ~~vLAQ~~l~~gr~~eA~~~A~~gL~l 383 (399)
..+||.|||.+|+|++|...|++.+..
T Consensus 200 ~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 200 YSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 478999999999999999999988764
No 210
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=39.16 E-value=39 Score=28.30 Aligned_cols=38 Identities=24% Similarity=0.299 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.+++|..++.+||+. -++|+|+||......|+++|+..
T Consensus 14 ~l~kAi~lv~~Ave~---------------D~ag~y~eAl~lY~~Aie~l~~a 51 (117)
T 2cpt_A 14 NLQKAIDLASKAAQE---------------DKAGNYEEALQLYQHAVQYFLHV 51 (117)
T ss_dssp HHHHHHHHHHHHHHH---------------HHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---------------HHccCHHHHHHHHHHHHHHHHHH
Confidence 478899999999743 78899999999999999998764
No 211
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=38.07 E-value=68 Score=28.22 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=47.0
Q ss_pred HHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCC-cCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 319 DLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPF-VGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 319 dlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~-VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+=|--|. .....+..+...||+..+..+|- .-|=...||.-|.+.|+|++|.+-.+.-|+
T Consensus 44 ~YAw~Lv~---S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 44 NYAWGLIK---STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHH---SSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34466666 33445577899999999998883 556678899999999999999998776554
No 212
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=37.31 E-value=52 Score=32.74 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhhCCCc------Cch-----HHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV------GEP-----HVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V------gEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.+++-|..|+..-|.. |-+ ..+||.|||.+++|++|...|.+.+.
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667777777776642 222 57899999999999999999988764
No 213
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=36.51 E-value=57 Score=25.49 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.++|.+++.+||+. -++|+|+||..-=..|++.|..+
T Consensus 8 ~~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie~l~~~ 44 (83)
T 2v6y_A 8 EDMARKYAILAVKA---------------DKEGKVEDAITYYKKAIEVLSQI 44 (83)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHHHHHHH
Confidence 56788888888876 89999999999888888887754
No 214
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=35.29 E-value=61 Score=25.55 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHHHhh
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLLLEW 387 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll~~W 387 (399)
.++|.+++.+||+. -++|+|+||..-=..|++.|..+
T Consensus 16 ~~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie~l~~a 52 (83)
T 2w2u_A 16 EEMARKYAINAVKA---------------DKEGNAEEAITNYKKAIEVLAQL 52 (83)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHHHHHHH
Confidence 78899999999876 89999999999888888888764
No 215
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=35.13 E-value=69 Score=25.31 Aligned_cols=49 Identities=22% Similarity=0.188 Sum_probs=40.0
Q ss_pred chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGLML 383 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~l 383 (399)
..+.++|.+.++++++.+ ..+-..-|+.+|.+ .+++++|..--+++.++
T Consensus 74 ~~d~~~A~~~~~~Aa~~g--~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 74 KKDLRKAAQYYSKACGLN--DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHcCC--CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 456889999999999983 24567899999999 89999998877777654
No 216
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=34.87 E-value=17 Score=34.95 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=41.3
Q ss_pred HHHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHH
Q 015869 316 EARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKG 380 (399)
Q Consensus 316 aArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~g 380 (399)
+|-.+|=+-.. .+ |.+.|++.++..|-.-..+++||++|...|++++|.+...+|
T Consensus 72 ~a~~~la~~~~--~~--------a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~ 126 (310)
T 3mv2_B 72 KVLDLYVQFLD--TK--------NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEG 126 (310)
T ss_dssp HHHHHHHHHHT--TT--------CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--cc--------HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45666666654 21 566777777765555556789999999999999999988877
No 217
>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP}
Probab=33.85 E-value=21 Score=30.46 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=21.3
Q ss_pred ChHhhHHHHHHHHHhcCCchHHHH
Q 015869 56 SFLEHLVDIYRILKIWKAPDCVCL 79 (399)
Q Consensus 56 Tf~~HL~~V~~iL~~Wgap~~V~~ 79 (399)
..+.||-.|..+|..||+.+.|+.
T Consensus 49 eY~~hL~~va~~L~~wG~~~~Vr~ 72 (110)
T 2ljw_A 49 EYQEHLDSVANYLHALGGAVQVKT 72 (110)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHH
Confidence 468999999999999999988873
No 218
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=33.02 E-value=57 Score=32.20 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=23.6
Q ss_pred HHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 357 HVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 357 ~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
+-+||.+||.+|+|++|...|.+.+.
T Consensus 194 ~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 194 NGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 57899999999999999999998774
No 219
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=32.70 E-value=41 Score=32.44 Aligned_cols=37 Identities=35% Similarity=0.443 Sum_probs=30.5
Q ss_pred cCch--HHHHHHHHhccCCcHHHHHH--------HHHHHHHHHhhCC
Q 015869 353 VGEP--HVVLGQIYLAKGEFEEAERE--------AGKGLMLLLEWGS 389 (399)
Q Consensus 353 VgEP--~~vLAQ~~l~~gr~~eA~~~--------A~~gL~ll~~WG~ 389 (399)
.|.| |.++|++|.+.|.|.+|+.| ++.-.+.+.+|-+
T Consensus 131 ~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~ 177 (312)
T 2wpv_A 131 FGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLC 177 (312)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 4777 89999999999999999984 5666778888843
No 220
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=32.27 E-value=55 Score=27.89 Aligned_cols=63 Identities=17% Similarity=0.086 Sum_probs=48.1
Q ss_pred HHHHHHHhhccCCCCCchhHHHHHHHHHHHHhhC-C-CcCchHHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 317 ARDLYWEAVCGNSDGSKEKLEKAEELLLRCIEKN-P-FVGEPHVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 317 ArdlYWeav~~~~~~~~~~~d~a~~lL~~~i~~N-P-~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
--.+=|--|. | ....+..+...||+..+..+ | ---|=..-||--|.+.|+|++|.+-.+.-|+
T Consensus 38 ~F~yAw~Lv~--S-~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 38 QFEYAWCLVR--T-RYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHTT--S-SSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc--C-CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3455688777 3 34455778999999999986 4 3444567899999999999999998876665
No 221
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=32.06 E-value=33 Score=36.95 Aligned_cols=43 Identities=21% Similarity=0.035 Sum_probs=39.8
Q ss_pred chhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHH
Q 015869 333 KEKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAER 375 (399)
Q Consensus 333 ~~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~ 375 (399)
+.+.+.|-++-++||..=|--.+++-.||.+|...|+||.|.-
T Consensus 350 K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALL 392 (754)
T 4gns_B 350 RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALF 392 (754)
T ss_dssp TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHH
Confidence 4558889999999999999999999999999999999999874
No 222
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=31.32 E-value=69 Score=31.21 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhhCCCc-----Cch-----HHHHHHHHhcc------CCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV-----GEP-----HVVLGQIYLAK------GEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V-----gEP-----~~vLAQ~~l~~------gr~~eA~~~A~~gL~ 382 (399)
.+.+++-|..|++.-|.. |-+ .-+||.|||.+ ++|++|...|.+.+.
T Consensus 169 y~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 169 YTYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 556777777888877753 222 57899999986 899999999988764
No 223
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=29.86 E-value=43 Score=33.02 Aligned_cols=47 Identities=15% Similarity=0.219 Sum_probs=36.2
Q ss_pred HH-HHHHHHHHHHhh-CCCcCc---h-----HHHHHHHHhccC---------CcHHHHHHHHHHHH
Q 015869 336 LE-KAEELLLRCIEK-NPFVGE---P-----HVVLGQIYLAKG---------EFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d-~a~~lL~~~i~~-NP~VgE---P-----~~vLAQ~~l~~g---------r~~eA~~~A~~gL~ 382 (399)
.+ .+++-|..|+.. -|+..+ + ..+||.|||.+| +|++|...|.+.+.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 55 566677788887 675432 2 678999999998 99999999987765
No 224
>3arc_C Photosystem II core light harvesting protein CP43; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3bz1_C* 1s5l_C* 1w5c_C* 2axt_C* 3bz2_C* 3prq_C* 3kzi_C* 3prr_C* 3a0b_C* 3a0h_C* 1izl_C*
Probab=29.16 E-value=1.1e+02 Score=31.52 Aligned_cols=82 Identities=16% Similarity=0.203 Sum_probs=54.2
Q ss_pred hhHhhcCCCch------hHHHHHHHhCCCc--cccCCCChHhhHHHHHHHHHhcCCchHHHHhccchhcccCccccc---
Q 015869 26 GELEAIDKNLP------SLIAVLRSVGAGE--CWHKHGSFLEHLVDIYRILKIWKAPDCVCLCGLFHSAYSNSYVNL--- 94 (399)
Q Consensus 26 ~e~~~~D~~Lp------~ll~~Lr~~GAge--~~Hk~GTf~~HL~~V~~iL~~Wgap~~V~~AGLfHSaYGt~~f~l--- 94 (399)
=|++..||+.| -+++.|-.+|-|- -.-.-+|.----++|.-+. .+-.+..+|++|+.||.+-+..
T Consensus 52 fEla~fdPs~PM~eQGlIlLPHLAtLG~GVg~gGeivdtypyfvIgvlHLI----sSaVLg~Ggi~H~~~gpe~L~e~~~ 127 (455)
T 3arc_C 52 FELAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVVHLI----SSAVLGFGGVYHAIRGPETLEEYSS 127 (455)
T ss_dssp HHHHHCCTTSCGGGTTCSHHHHHHHTTSSBCGGGCBCCSHHHHHHHHHHHH----HHHHHHHHHHHHHHTSCSCSTTTCT
T ss_pred eeeeccCCCCChhhccceechhhhccccccCCCCeEecccceeehhHHHHH----HHHHHHhhHhhhhhcCchhhccccc
Confidence 37778899998 3789999987332 1112245433333333333 2456788999999999866654
Q ss_pred -cCCCCCcchHHHHHhhch
Q 015869 95 -AIFDPNTGRDVVRGHVGD 112 (399)
Q Consensus 95 -aifdp~~~R~~vr~lIG~ 112 (399)
..|+.+ ++.++-.|+|-
T Consensus 128 ~F~~eW~-d~~~lt~ILG~ 145 (455)
T 3arc_C 128 FFGYDWK-DKNKMTTILGF 145 (455)
T ss_dssp TTCCCTT-CHHHHHHHHHH
T ss_pred ccCcccC-ChHHhhHHHHH
Confidence 445564 88888888885
No 225
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=29.01 E-value=90 Score=29.29 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHHHH
Q 015869 334 EKLEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGLML 383 (399)
Q Consensus 334 ~~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL~l 383 (399)
.+.++|.+.++++++.++ .+.+.-|+.+|.+ .+++++|...-+++++.
T Consensus 381 ~~~~~A~~~~~~A~~~~~--~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 432 (490)
T 2xm6_A 381 KDEQQAAIWMRKAAEQGL--SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTN 432 (490)
T ss_dssp CCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 346677777777777753 4556667777777 67777777666655543
No 226
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=28.82 E-value=62 Score=32.01 Aligned_cols=46 Identities=26% Similarity=0.335 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhCCCc---Cch-----HHHHHHHHhccCCcHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFV---GEP-----HVVLGQIYLAKGEFEEAEREAGKGL 381 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~V---gEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL 381 (399)
.+.+++-|..|+..-|.. |-+ ..+||.|||.+|+|++|...|.+.+
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 445556666666665643 333 5789999999999999999887654
No 227
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=27.76 E-value=92 Score=29.24 Aligned_cols=44 Identities=16% Similarity=0.025 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhc----cCCcHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLA----KGEFEEAEREAGKGL 381 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~----~gr~~eA~~~A~~gL 381 (399)
.++|.+.++++++.+. .+-+.-|+.+|.+ .+++++|...-.+++
T Consensus 167 ~~~A~~~~~~a~~~~~--~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~ 214 (490)
T 2xm6_A 167 YVMAREWYSKAAEQGN--VWSCNQLGYMYSRGLGVERNDAISAQWYRKSA 214 (490)
T ss_dssp HHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC--HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence 4455555555555531 2344555555555 555555555544444
No 228
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=27.68 E-value=27 Score=32.99 Aligned_cols=46 Identities=13% Similarity=-0.070 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhC--CC-cCchHHHHHHHHhccCCcHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKN--PF-VGEPHVVLGQIYLAKGEFEEAEREAGKGL 381 (399)
Q Consensus 336 ~d~a~~lL~~~i~~N--P~-VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL 381 (399)
.+.|...+++++.-+ |- .-+=++.++.++...|+.+||...-++.+
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQ 235 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 444555555554322 22 33334445555555555555554444433
No 229
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=27.40 E-value=82 Score=31.64 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhCCC--------cCch-----HHHHHHHHhccCCcHHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPF--------VGEP-----HVVLGQIYLAKGEFEEAEREAGKGLM 382 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~--------VgEP-----~~vLAQ~~l~~gr~~eA~~~A~~gL~ 382 (399)
.+.+++-|..|+..-|. .|-+ .-+||.+||.+++|++|...|.+.+.
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 66777778888887773 1222 57899999999999999999988765
No 230
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=26.48 E-value=73 Score=30.08 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhh-CCCc-CchHHHHHHHHhccCCcHHHHHHHHHHH
Q 015869 336 LEKAEELLLRCIEK-NPFV-GEPHVVLGQIYLAKGEFEEAEREAGKGL 381 (399)
Q Consensus 336 ~d~a~~lL~~~i~~-NP~V-gEP~~vLAQ~~l~~gr~~eA~~~A~~gL 381 (399)
++.|+..|+.++.. -|+. .+-++.|+++|-..|+|++|.+.-++++
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 56666666655554 2433 3466666666666666666666555543
No 231
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=24.97 E-value=59 Score=30.99 Aligned_cols=67 Identities=10% Similarity=0.232 Sum_probs=46.8
Q ss_pred HHHhh--chhhhHHhhh----------------hccccCchhhhhhhhcccchHHHHHHhhhchhhhHHhhhcccchhHH
Q 015869 106 VRGHV--GDAAEKLIHL----------------FCIVPRQPLIHDDLLFEYSDQELVEHLKASDVSLINAKEKGLFNAEE 167 (399)
Q Consensus 106 vr~lI--G~~AE~LVyl----------------fct~dR~~lv~~~Ll~~~~D~el~~~l~~s~~s~~~Ar~~g~f~~~~ 167 (399)
|.+++ |..+|.|+|. +|.|||.++.. .| .....+|+.+-++
T Consensus 201 ~~ell~~~~~~e~il~rlf~e~~~i~~~~~v~f~C~CSrer~~~-~L-~slg~~El~~mi~------------------- 259 (291)
T 1vzy_A 201 ISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFET-AI-LGLGKKEIQDMIE------------------- 259 (291)
T ss_dssp HHHHHHHTCCHHHHHHHHHSSCCEEEEEEECEECCCCCHHHHHH-HH-HTTCHHHHHHHHH-------------------
T ss_pred hHHHhcCCCCHHHHHHHHhCCCcEECcCcccCccCCCCHHHHHH-HH-HhCCHHHHHHHHH-------------------
Confidence 35556 7788877764 49999999844 44 2355566555543
Q ss_pred HHHHHhhccCCCCC-ceeeecccCccccccHHHHHHHH
Q 015869 168 AWRKKINELLPADG-LTVKHIKTGEDVGVSRRVVATFV 204 (399)
Q Consensus 168 ~wR~k~~~l~p~~G-i~vkhi~tGE~v~Lsrr~va~F~ 204 (399)
.+| |+|.=-+-|+...+++..+..++
T Consensus 260 -----------e~g~iev~C~FC~~~Y~f~~~dl~~l~ 286 (291)
T 1vzy_A 260 -----------EDGQAEAVCHFCNEKYLFTKEELEGLR 286 (291)
T ss_dssp -----------HHSEEEEECTTTCCEEEEEHHHHHHHH
T ss_pred -----------cCCCEEEEeeCCCCEEEeCHHHHHHHH
Confidence 234 88888889999999999887664
No 232
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=23.18 E-value=1e+02 Score=29.29 Aligned_cols=31 Identities=0% Similarity=-0.012 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHhhCCCcCchHHHHHHHHh
Q 015869 335 KLEKAEELLLRCIEKNPFVGEPHVVLGQIYL 365 (399)
Q Consensus 335 ~~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l 365 (399)
+.++|.+.++++++.+|-...-+.-|+.+|.
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~ 224 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLG 224 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3555666666666666655555555666653
No 233
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=22.66 E-value=44 Score=26.53 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=29.4
Q ss_pred hHHHHHHhcccchhhhHhhcCCCchhHHHHHHHhCCC
Q 015869 12 YLETLVASARPFLRGELEAIDKNLPSLIAVLRSVGAG 48 (399)
Q Consensus 12 ~~~~l~~~arpfLr~e~~~~D~~Lp~ll~~Lr~~GAg 48 (399)
.=++|+++|+.||... .-.+.-+...+.||++-|-.
T Consensus 13 ~Re~li~~Av~FLqdp-~V~~sp~~~K~~FL~sKGLt 48 (70)
T 2w84_A 13 PREPLIATAVKFLQNS-RVRQSPLATRRAFLKKKGLT 48 (70)
T ss_dssp CCHHHHHHHHHHHCST-TGGGSCHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHhCCh-hhhhCCHHHHHHHHHHcCCC
Confidence 3578999999999987 33466688999999999854
No 234
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=21.62 E-value=94 Score=32.52 Aligned_cols=48 Identities=13% Similarity=-0.013 Sum_probs=40.0
Q ss_pred HHHH-HHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHHHHHHHHHH
Q 015869 337 EKAE-ELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAEREAGKGLMLL 384 (399)
Q Consensus 337 d~a~-~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~A~~gL~ll 384 (399)
+.|. .+|.+||..||..-.=++-+|.++...|+++.|+.--+++++.+
T Consensus 360 ~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l 408 (679)
T 4e6h_A 360 STVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRI 408 (679)
T ss_dssp TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3564 99999999999765557788999999999999998888888764
No 235
>3oei_C RELK (toxin RV3358); toxin-antitoxin systems, protein-protein complex, tuberculos structural genomics consortium, protein binding; HET: MLZ FLC; 2.15A {Mycobacterium tuberculosis} SCOP: d.298.1.0
Probab=21.08 E-value=1.1e+02 Score=24.81 Aligned_cols=33 Identities=24% Similarity=0.517 Sum_probs=22.6
Q ss_pred HHHHHH-HHHhhccCCCCCchhHHHHHHHHHHHHhhCCCcC
Q 015869 315 IEARDL-YWEAVCGNSDGSKEKLEKAEELLLRCIEKNPFVG 354 (399)
Q Consensus 315 ~aArdl-YWeav~~~~~~~~~~~d~a~~lL~~~i~~NP~Vg 354 (399)
.|.+|+ ||...- +....+..++|. .|..||+.|
T Consensus 20 ~A~kdl~~w~kld------k~~~krI~~~I~-~l~~nP~~g 53 (96)
T 3oei_C 20 DAWEDFLFWLAAD------RKTARRITRLIG-EIQRDPFSG 53 (96)
T ss_dssp HHHHHHHHHHHHC------HHHHHHHHHHHH-HHHHCTTSS
T ss_pred HHHHHHHHHHhcC------HHHHHHHHHHHH-HHHhCCCcC
Confidence 466675 898732 344667788885 477899975
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=20.90 E-value=1.3e+02 Score=30.52 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhhCCCcCchHHHHHHHHhccCCcHHHHHH
Q 015869 336 LEKAEELLLRCIEKNPFVGEPHVVLGQIYLAKGEFEEAERE 376 (399)
Q Consensus 336 ~d~a~~lL~~~i~~NP~VgEP~~vLAQ~~l~~gr~~eA~~~ 376 (399)
.+.|+.--.+|+.+||-.|.||--||=++...|++-+|.-.
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~ 208 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFY 208 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHH
Confidence 35678888889999999999999999999999999888755
No 237
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=20.34 E-value=49 Score=32.18 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=22.3
Q ss_pred HHHHHHHHhccCCcHHHHHHHHHHH
Q 015869 357 HVVLGQIYLAKGEFEEAEREAGKGL 381 (399)
Q Consensus 357 ~~vLAQ~~l~~gr~~eA~~~A~~gL 381 (399)
..+||.|||.+|+|++|...|.+.+
T Consensus 204 ~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 204 NMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 5689999999999999999998764
Done!