BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015870
         (399 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
           PE=1 SV=1
          Length = 629

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/411 (75%), Positives = 358/411 (87%), Gaps = 12/411 (2%)

Query: 1   MAQVQAQGQNVNG------------GGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMG 48
           MAQVQ QGQ  NG            GGA A QFG TSLYVGDL+ NVTDSQL+D F QMG
Sbjct: 1   MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMG 60

Query: 49  QVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRK 108
            VV+VRVCRDL TRRSLGYGYVNF+N Q+AARA++ LN+ PL GKPIRVMYSHRDPS+R+
Sbjct: 61  TVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRR 120

Query: 109 SGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKA 168
           SGAGNIFIKNLD++IDHKALHDTFS+FGNI+SCKVA D +GQSKGYGFVQ+ NEESAQKA
Sbjct: 121 SGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKA 180

Query: 169 IEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGT 228
           IEKLNGMLLNDKQVYVG FLR+QERD+  NK+KFTNVYVKNL+ESTT++DL+ +FGEYG 
Sbjct: 181 IEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGK 240

Query: 229 ITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELEL 288
           ITSAVVM+DG+GKSK FGFVNFEN+DDAARAVE+LNG KFDDKEWYVG+AQKKSERE EL
Sbjct: 241 ITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETEL 300

Query: 289 KHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGS 348
           + ++EQN+KEAADKFQ +NLY+KNLD SI DEKLK++FSPFG++TS KVMRDP+G S+GS
Sbjct: 301 RVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGS 360

Query: 349 GFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCLLQCR 399
           GFVAF+TPEEA+ A+ +++GKM+ SKPLYVA+AQRKEDRR RLQ    Q R
Sbjct: 361 GFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVR 411


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
           PE=2 SV=1
          Length = 660

 Score =  504 bits (1299), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/378 (64%), Positives = 297/378 (78%), Gaps = 3/378 (0%)

Query: 24  TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALE 83
           +SLY GDL+  VT++ L+DLF  +  VVSVRVCRD   RRSLGY Y+NFSN  +A RA+E
Sbjct: 49  SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAME 107

Query: 84  MLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 143
            LN+TPL  +PIR+M S+RDPS R SG GNIFIKNLD +ID+KAL +TFS+FG ILSCKV
Sbjct: 108 ALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKV 167

Query: 144 ATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER--DTEINKSK 201
           A D+ G+SKGYGFVQF+ EESAQ AI+KLNGML+NDKQV+VGHF+R+QER  D      +
Sbjct: 168 AMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227

Query: 202 FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVE 261
           FTNVYVKNL +   E++L+K+FG++G I+SAVVMRD  G S+CFGFVNFE ++ AA AVE
Sbjct: 228 FTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287

Query: 262 ALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEK 321
            +NG    D   YVG+AQKKSERE EL+ +FEQ      +K QGANLY+KNLDDS+DDEK
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347

Query: 322 LKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALA 381
           LK++FS +G++TS KVM +P G+SRG GFVA+S PEEA RAL EMNGKM+  KPLY+ALA
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407

Query: 382 QRKEDRRARLQVCLLQCR 399
           QRKEDRRA LQ    Q R
Sbjct: 408 QRKEDRRAHLQALFSQIR 425


>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
           PE=1 SV=3
          Length = 682

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/378 (60%), Positives = 299/378 (79%), Gaps = 3/378 (0%)

Query: 24  TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALE 83
           +SLYVGDL+ +V +S L DLFNQ+  V ++RVCRDL T RSLGY YVNF+N ++A+RA+E
Sbjct: 59  SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAME 117

Query: 84  MLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 143
            LN+ P+  +PIR+M S+RDPS R SG GN+FIKNLD +ID+KAL++TFS+FG ILSCKV
Sbjct: 118 SLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKV 177

Query: 144 ATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKS--K 201
           A D+ G+SKGYGFVQF+ EE+AQ AI+KLNGMLLNDKQV+VGHF+R+Q+R    + +   
Sbjct: 178 AMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS 237

Query: 202 FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVE 261
           FTNVYVKNL +  T+++L+K+FG+YG I+SAVVM+D  G S+ FGFVNF + + AA AVE
Sbjct: 238 FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVE 297

Query: 262 ALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEK 321
            +NG    +   YVG+AQKKS+RE EL+ +FEQ      +K QG+NLY+KNLDDS++DEK
Sbjct: 298 KMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEK 357

Query: 322 LKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALA 381
           LK++FS +G++TSCKVM +  G+SRG GFVA+S PEEA  A+ EMNGKM+  KPLYVALA
Sbjct: 358 LKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALA 417

Query: 382 QRKEDRRARLQVCLLQCR 399
           QRKE+R+A LQ    Q R
Sbjct: 418 QRKEERQAHLQSLFTQIR 435


>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2
           SV=1
          Length = 636

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/378 (58%), Positives = 293/378 (77%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L++ FG++G   S  VM D  GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  195 bits (496), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/294 (39%), Positives = 173/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D + L + F  F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 167/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA+E +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK+LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277



 Score = 55.5 bits (132), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2
          Length = 636

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/378 (58%), Positives = 293/378 (77%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L++ FG++G   S  VM D  GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  195 bits (496), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/294 (39%), Positives = 173/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D + L + F  F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 167/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA+E +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK+LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277



 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1
          Length = 644

 Score =  469 bits (1206), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/378 (60%), Positives = 295/378 (78%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
           A A+ +   SLYVGDL ++VT++ LY+ F+  G V+S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKPIR+M+S RDPSLRKSG GN+FIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGY FV F+ +E+A KAIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EIN-KSK-FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+  K+K FTNVY+KN  E   +E L++ F ++G   S  VMRD +GKSK FGFV++E  
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AVE +NGK+   K  +VG+AQKK ER+ ELK +FEQ  +E   ++QG NLYIKNL
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD+IDDEKL++ FSPFGSITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V S
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERKAHL 378



 Score =  180 bits (456), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 171/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GY +V+F   + A +A
Sbjct: 97  GVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D ++L + FS F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV  D NG+SKG+GFV ++  E A KA+E++NG  ++ K ++VG   +K ER  
Sbjct: 215 GKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQA 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+Y+KNL ++  +E L+K F  +G+ITSA VM + DG+S
Sbjct: 275 EL-KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRV 386



 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 167/282 (59%), Gaps = 16/282 (5%)

Query: 112 GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDNEESAQKAIE 170
            ++++ +L   +    L++ FS  G +LS +V  D+   +S GY +V F     A++A++
Sbjct: 11  ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70

Query: 171 KLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTIT 230
            +N  ++  K + +       +RD  + KS   NV++KNL +S   + L  +F  +G I 
Sbjct: 71  TMNFDVIKGKPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126

Query: 231 SAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKH 290
           S  V+ D +G SK + FV+FE  + A +A+E +NG   +D++ +VG+ + + ERE EL  
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185

Query: 291 QFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGF 350
           +        A +F   N+YIKN  + +DDE LK+LFS FG   S KVMRDP+G S+G GF
Sbjct: 186 K--------AKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235

Query: 351 VAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           V++   E+A++A+ EMNGK +  K ++V  AQ+K +R+A L+
Sbjct: 236 VSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELK 277



 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  AA  +  A+LY+ +L   + +  L + FSP G + S +V RD   I+R   G  +V 
Sbjct: 1   MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLR 94


>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2
          Length = 636

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/378 (58%), Positives = 292/378 (77%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L+  FG++G   S  VM D  GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 173/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D + L D F  F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA+E +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277



 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1
          Length = 636

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/378 (58%), Positives = 292/378 (77%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L+  FG++G   S  VM D  GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 173/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D + L D F  F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA+E +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277



 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1
          Length = 636

 Score =  466 bits (1200), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 220/378 (58%), Positives = 291/378 (76%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  + T++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L+  FG++G   S  VM D  GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  197 bits (501), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 173/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V  +  R     + GA      N++IKN  + +D + L D F  F
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  174 bits (441), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 165/291 (56%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L        L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA+E +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 277



 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L     +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-b
           PE=2 SV=1
          Length = 633

 Score =  464 bits (1195), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/378 (57%), Positives = 291/378 (76%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AI+K+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  E   +E L++ FG+YG   S  VM D  GKS+ FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK  + K  +VG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ F+PFGSITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFTPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  183 bits (465), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/294 (37%), Positives = 171/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LN + + V  +  R     + GA      N++IKN  + +D + L + F  +
Sbjct: 155 IDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQY 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+S+G+GFV F+  E AQKA++ +NG  LN K ++VG   +K ER T
Sbjct: 215 GAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +G+ITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  169 bits (427), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 166/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  K V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA++ +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK+ F  +G+  S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
            G SRG GFV+F   E+A +A+ +MNGK +  K ++V  AQ+K +R+  L+
Sbjct: 227 HGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELK 277



 Score = 55.5 bits (132), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a
           PE=1 SV=3
          Length = 633

 Score =  461 bits (1186), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/378 (57%), Positives = 291/378 (76%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A  +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD+ TRRSLGY YVNF   
Sbjct: 3   PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + G+P+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKV  D NG SKGYGFV F+ +E+A++AI+K+NGMLLND++V+VG F  ++ER+ 
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREA 181

Query: 196 EI--NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTNVY+KN  +   +E L++ FG+YG   S  VM D +GKSK FGFV+FE  
Sbjct: 182 ELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           +DA +AV+ +NGK  + K  +VG+AQKK ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDDE+L++ F PFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERQAHL 378



 Score =  184 bits (468), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 171/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LN + + V  +  R     + GA      N++IKN    ++ + L + F  +
Sbjct: 155 IDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKY 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD NG+SKG+GFV F+  E AQKA++++NG  +N K ++VG   +K ER T
Sbjct: 215 GPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQT 274

Query: 196 EINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           E+ K KF              N+YVKNL +   +E L+K F  +GTITSA VM +G G+S
Sbjct: 275 EL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q M
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386



 Score =  169 bits (429), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 168/291 (57%), Gaps = 16/291 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L + +    L++ FS  G ILS +V  D+   +S GY +V F  
Sbjct: 2   NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
              A++A++ +N  ++  + V +       +RD  + KS   N+++KNL +S   + L  
Sbjct: 62  PADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +F  +G I S  V+ D +G SK +GFV+FE  + A RA++ +NG   +D++ +VG+ + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  D ++DE+LK++F  +G   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           +G S+G GFV+F   E+A +A+ EMNGK +  K ++V  AQ+K +R+  L+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELK 277



 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---GSGFVA 352
           M  +A  +  A+LY+ +L   + +  L + FSP G I S +V RD   I+R   G  +V 
Sbjct: 1   MNPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRD--MITRRSLGYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F  P +A RAL  MN  ++  +P+ +  +QR    R
Sbjct: 59  FQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLR 94


>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=pab1 PE=1 SV=2
          Length = 653

 Score =  452 bits (1162), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/379 (56%), Positives = 287/379 (75%), Gaps = 3/379 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LFN +G V S+RVCRD  TRRSLGY YVNF N ++  +AL
Sbjct: 79  SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 138

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           + LN+T + G+P R+M+S RDPSLRK G GN+FIKNLD AID+KALHDTFSAFG ILSCK
Sbjct: 139 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCK 198

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D  G +KGYGFV FD+ ESA  AIE +NGMLLNDK+VYVGH + ++ER +++   K+
Sbjct: 199 VAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKA 258

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTNVY+KNL    TE++    FG++G ITS  +++D + K + FGFVN+ N + A +AV
Sbjct: 259 NFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAV 318

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LN K++  K+ YVG+AQKK ERE EL+ ++EQ   E  +K+QG NL+IKNL D +DDE
Sbjct: 319 DELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDE 378

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           +LK  FS FG+ITS K+M D  G S+G GFV ++TPEEA++A+ EMN +M+  KPLYVAL
Sbjct: 379 RLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVAL 438

Query: 381 AQRKEDRRARLQVCLLQCR 399
           AQRKE RR++L+   +Q R
Sbjct: 439 AQRKEVRRSQLE-AQIQAR 456



 Score =  168 bits (426), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 19/292 (6%)

Query: 20  QFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAA 79
           + GT ++++ +L+  + +  L+D F+  G+++S +V  D     + GYG+V+F + + A 
Sbjct: 164 KMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESAN 222

Query: 80  RALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFS 133
            A+E +N   LN K + V +  S R+   +    K+   N++IKNLD  I  +   D F 
Sbjct: 223 AAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFG 282

Query: 134 AFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER 193
            FG I S  +  D N + +G+GFV + N E AQKA+++LN      K++YVG   +K ER
Sbjct: 283 QFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHER 342

Query: 194 DTEI------------NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGK 241
           + E+            NK +  N+++KNL +   +E L+  F  +GTITSA +M D  GK
Sbjct: 343 EEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGK 402

Query: 242 SKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
           SK FGFV +   ++A +AV  +N +    K  YV  AQ+K  R  +L+ Q +
Sbjct: 403 SKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVRRSQLEAQIQ 454



 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 19  NQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEA 78
           N++   +L++ +L+  V D +L   F+  G + S ++  D    +S G+G+V ++  +EA
Sbjct: 359 NKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEA 417

Query: 79  ARALEMLNFTPLNGKPIRVMYSHR 102
            +A+  +N   L GKP+ V  + R
Sbjct: 418 NKAVTEMNQRMLAGKPLYVALAQR 441


>sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya
           gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
           NRRL Y-1056) GN=PAB1 PE=3 SV=1
          Length = 585

 Score =  449 bits (1155), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/369 (58%), Positives = 286/369 (77%), Gaps = 2/369 (0%)

Query: 25  SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEM 84
           SLYVG+LE  V+++ LYD+F+ +G V S+RVCRD  T  SLGY YVNF + +   +A+E 
Sbjct: 39  SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98

Query: 85  LNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVA 144
           LN+T + GKP R+M+S RDPSLRK G+GNI+IKNL  AID+K+LH+TFS FGNILSCKVA
Sbjct: 99  LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158

Query: 145 TDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KSKF 202
           TD NG S+G+GFV F+NE  A+ AIE ++GML+ND++VYV   + K++R +++   K+KF
Sbjct: 159 TDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKF 218

Query: 203 TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEA 262
           TNVYVKN+ + T++E+ ++ FG+YG ITSAV+ +D +GK + FGFVNFE+   AA+AV+ 
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDE 278

Query: 263 LNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKL 322
           LN  +F  ++ YVG+AQKK ER  ELK Q+E    E   K+QG NL++KNLDDSIDDEKL
Sbjct: 279 LNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKL 338

Query: 323 KQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
           K+ F+PFG+ITS KVMRD +G SRG GFV FSTPEEA++A+ E N ++V  KPLYVA+AQ
Sbjct: 339 KEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398

Query: 383 RKEDRRARL 391
           RKE RR +L
Sbjct: 399 RKEVRRNQL 407



 Score =  161 bits (407), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 16/290 (5%)

Query: 104 PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNE 162
           P +  SGA ++++  L+  +    L+D FS  G++ S +V  D +   S GY +V F + 
Sbjct: 31  PKVETSGA-SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDH 89

Query: 163 ESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKS 222
           E+  KAIE+LN  L+  K   +       +RD  + K    N+Y+KNL  +   + L ++
Sbjct: 90  EAGPKAIEQLNYTLIKGKPCRI----MWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHET 145

Query: 223 FGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKS 282
           F  +G I S  V  D +G S+ FGFV+FEN  DA  A+EA++G   +D+E YV     K 
Sbjct: 146 FSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKK 205

Query: 283 ERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPS 342
           +R+ +L+        E   KF   N+Y+KN+D     E+ ++LF  +G ITS  + +D  
Sbjct: 206 DRQSKLE--------EVKAKF--TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSE 255

Query: 343 GISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           G  RG GFV F     A++A+ E+N      + LYV  AQ+K +R   L+
Sbjct: 256 GKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELK 305



 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 158/290 (54%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G+ ++Y+ +L   + +  L++ F+  G ++S +V  D     S G+G+V+F N  +A  A
Sbjct: 124 GSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATD-ENGVSRGFGFVHFENESDARDA 182

Query: 82  LEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAF 135
           +E ++   +N + + V    S +D   +    K+   N+++KN+D+    +   + F  +
Sbjct: 183 IEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKY 242

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G I S  +  D  G+ +G+GFV F++  +A KA+++LN +    +++YVG   +K ER  
Sbjct: 243 GKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQ 302

Query: 196 EINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+ K          +K+   N++VKNL +S  +E L++ F  +GTITSA VMRD  G S+
Sbjct: 303 ELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSR 362

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV F   ++A +A+   N +    K  YV  AQ+K  R  +L  Q +
Sbjct: 363 GFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRNQLAQQIQ 412



 Score = 96.7 bits (239), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 17/202 (8%)

Query: 192 ERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDG-DGKSKCFGFVNF 250
           E +T   ++   ++YV  L  + +E  L   F   G+++S  V RD     S  + +VNF
Sbjct: 27  ESETPKVETSGASLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNF 86

Query: 251 ENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYI 310
            + +   +A+E LN      K   +      S+R+  L+            K    N+YI
Sbjct: 87  HDHEAGPKAIEQLNYTLIKGKPCRI----MWSQRDPSLR------------KKGSGNIYI 130

Query: 311 KNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKM 370
           KNL  +ID++ L + FS FG+I SCKV  D +G+SRG GFV F    +A  A+  ++G +
Sbjct: 131 KNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGML 190

Query: 371 VVSKPLYVALAQRKEDRRARLQ 392
           +  + +YVAL   K+DR+++L+
Sbjct: 191 MNDQEVYVALHVSKKDRQSKLE 212


>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1
          Length = 751

 Score =  449 bits (1155), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 222/427 (51%), Positives = 294/427 (68%), Gaps = 47/427 (11%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +ANQ  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N 
Sbjct: 44  PSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AF
Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAF 163

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R +
Sbjct: 164 GNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQS 223

Query: 196 EIN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           +    K+ FTNVY+KN+ +  T+E+ +K F ++G ITSA + RD +GKS+ FGFVNF   
Sbjct: 224 KFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTH 283

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           D A  AV+ +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL
Sbjct: 284 DSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNL 343

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPS------------------------------- 342
            D +DDEKL++LFSPFG+ITS KVMRD                                 
Sbjct: 344 TDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPK 403

Query: 343 --------------GISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
                         G S+G GFV FS+P+EAS+A+ EMN +MV  KPLYVALAQRK+ RR
Sbjct: 404 ESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRR 463

Query: 389 ARLQVCL 395
           ++L+  +
Sbjct: 464 SQLEASI 470


>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L
           PE=2 SV=1
          Length = 614

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/378 (56%), Positives = 287/378 (75%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
           A+ + +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y+NF   
Sbjct: 3   ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  L G+PIR+M+S RDP LRKSG GNIFIKNL+ +ID+KAL+DTFS F
Sbjct: 63  ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKVA D +G S+G+GFV F+  E+AQ+AI  +NGMLLND++V+VGHF  ++ER+ 
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181

Query: 196 EINKS--KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E+     +FTN+YVKNL     E+ LQ  F ++G + S  VMRD  G S+CFGFVNFE  
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           ++A +AV  +NGK+   +  Y G+AQK+ ER+ ELK +FEQ  ++   ++QG NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DDSIDD+KL++ FSP+G ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERKAIL 378



 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 167/297 (56%), Gaps = 29/297 (9%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +LE ++ +  LYD F+  G ++S +V  D    R  G+G+V+F   + A +A
Sbjct: 97  GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSR--GFGFVHFETHEAAQQA 154

Query: 82  LEMLNFTPLNGKPIRVMY--SHRDPSLRKSGAG-------NIFIKNLDKAIDHKALHDTF 132
           +  +N   LN + + V +  S R+   R++  G       NI++KNL   +D + L D F
Sbjct: 155 INTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGLQDLF 211

Query: 133 SAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQE 192
           S FG +LS KV  D +G S+ +GFV F+  E AQKA+  +NG  ++ + +Y G   ++ E
Sbjct: 212 SQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVE 271

Query: 193 RDTEINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGD 239
           R  E+ K +F              N+YVKNL +S  ++ L+K F  YG ITSA VM +G 
Sbjct: 272 RQNEL-KRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG- 329

Query: 240 GKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           G SK FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q +
Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRL 386



 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 20/292 (6%)

Query: 106 LRKSGAG----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFD 160
           +  SG+G    ++++ +L   +    L++ FS  G ILS +V  D+   +S GY ++ F 
Sbjct: 1   MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ 60

Query: 161 NEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQ 220
               A++A++ +N  +L  + + +       +RD  + KS   N+++KNL +S   + L 
Sbjct: 61  QPADAERALDTMNFEMLKGQPIRI----MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALY 116

Query: 221 KSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQK 280
            +F  +G I S  V  D  G S+ FGFV+FE  + A +A+  +NG   +D++ +VG  + 
Sbjct: 117 DTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKS 175

Query: 281 KSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRD 340
           + ERE EL           A   +  N+Y+KNL   +D++ L+ LFS FG + S KVMRD
Sbjct: 176 RREREAEL----------GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD 225

Query: 341 PSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
            SG SR  GFV F   EEA +A++ MNGK V  + LY   AQ++ +R+  L+
Sbjct: 226 NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELK 277


>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago
           maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1
          Length = 651

 Score =  448 bits (1152), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/382 (55%), Positives = 294/382 (76%), Gaps = 3/382 (0%)

Query: 17  NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQ 76
           NA+    TSLYVG+L+ +VT++ L+++F+ +G V S+RVCRD  TRRSLGY YVNF NA 
Sbjct: 40  NADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAA 99

Query: 77  EAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 136
           +  RA+E LN++ +  +P R+M+S RDP+LR++G GNIFIKNLD  ID+KALHDTF+AFG
Sbjct: 100 DGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFG 159

Query: 137 NILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE 196
           NILSCKVAT+  G S GYGFV ++  E+A+ AI+ +NGMLLNDK+VYVGH + ++ER  +
Sbjct: 160 NILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAK 218

Query: 197 INKSK--FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSD 254
           I +++  FTNVY KN+    T+++ +K F ++G ITS V+ RD DGKSK FGFVNFE+ +
Sbjct: 219 IEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHN 278

Query: 255 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLD 314
           +A +AV+ L+   F  ++ +V +AQKKSERE EL+  +E    E   KFQG NLY+KN+ 
Sbjct: 279 EAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIP 338

Query: 315 DSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSK 374
           +S DDE+L++ F+PFG+ITSCK+MR PSG+SRG GFV +S PEEA++A+ EMNGKM+ ++
Sbjct: 339 ESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNR 398

Query: 375 PLYVALAQRKEDRRARLQVCLL 396
           PLYVALAQRK+ RR +L+  ++
Sbjct: 399 PLYVALAQRKDVRRQQLEAQIM 420


>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1
          Length = 768

 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/429 (52%), Positives = 295/429 (68%), Gaps = 56/429 (13%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +  RAL
Sbjct: 54  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+T + G+P R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D  G SKGYGFV ++  E+AQ AI+ +NGMLLNDK+V+VGH + K++R ++    K+
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGD-GKSKCFGFVNFENSDDAARA 259
            FTNVYVKN+ + TTEE+ +  F ++G ITSA + RD + GKS+ FGFVNF + D+AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293

Query: 260 VEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDD 319
           VEALN K F  ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLYIKNL D IDD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353

Query: 320 EKLKQLFSPFGSITSCKVMRD--------------------------------------- 340
           EKL++LFS +G+ITS KVMRD                                       
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413

Query: 341 --------------PSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKED 386
                         P G S+G GFV FS+P+EAS+A+ EMN +MV  KPLYVALAQRK+ 
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473

Query: 387 RRARLQVCL 395
           RR++L+  +
Sbjct: 474 RRSQLEASI 482



 Score = 39.3 bits (90), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 52/137 (37%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTR--------------- 62
           A+++   +LY+ +L  ++ D +L +LF+  G + S +V RD +                 
Sbjct: 334 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKE 393

Query: 63  -------------------------------------RSLGYGYVNFSNAQEAARALEML 85
                                                +S G+G+V FS+  EA++A+  +
Sbjct: 394 PETKEEEPKDEAGDNAENKDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEM 453

Query: 86  NFTPLNGKPIRVMYSHR 102
           N   ++GKP+ V  + R
Sbjct: 454 NQRMVHGKPLYVALAQR 470


>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
           CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1
          Length = 753

 Score =  446 bits (1147), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/429 (51%), Positives = 294/429 (68%), Gaps = 49/429 (11%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A+Q  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N 
Sbjct: 44  PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AF
Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAF 163

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R +
Sbjct: 164 GNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQS 223

Query: 196 EIN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           +    K+ FTNVY+KN+ +  T+E+ +K F ++G ITSA + RD +GKS+ FGFVNF   
Sbjct: 224 KFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTH 283

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           D A  AV+ +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL
Sbjct: 284 DSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNL 343

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPS------------------------------- 342
            D +DDEKL++LFSPFG+ITS KVMRD                                 
Sbjct: 344 TDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEK 403

Query: 343 ----------------GISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKED 386
                           G S+G GFV FS+P+EAS+A+ EMN +MV  KPLYVALAQRK+ 
Sbjct: 404 PKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDV 463

Query: 387 RRARLQVCL 395
           RR++L+  +
Sbjct: 464 RRSQLEASI 472


>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=Xenopus tropicalis
           GN=epabp PE=2 SV=1
          Length = 629

 Score =  442 bits (1138), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/384 (54%), Positives = 289/384 (75%), Gaps = 9/384 (2%)

Query: 10  NVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGY 69
           N  G G     +   SLYVGDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y
Sbjct: 2   NATGAG-----YPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAY 56

Query: 70  VNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALH 129
           +NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FIKNLD++ID+KAL+
Sbjct: 57  INFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALY 116

Query: 130 DTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLR 189
           DTFSAFGNILSCKV  D +G S+GYGFV F+ +E+A +AI+ +NGMLLND++V+VGHF  
Sbjct: 117 DTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKS 175

Query: 190 KQERDTEINKS--KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGF 247
           ++ER+ E      +FTNVY+KN  E   ++ L++ F  +G   S  VM D  G+S+ FGF
Sbjct: 176 RRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGF 235

Query: 248 VNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGAN 307
           VN+ N ++A +AV  +NGK+ + +  YVG+AQK+ ER+ ELK +FEQ  +E  +++QG N
Sbjct: 236 VNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVN 295

Query: 308 LYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMN 367
           LY+KNLDD IDD++L++ FSP+G+ITS KVM +  G S+G GFV FS+PEEA++A+ EMN
Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMN 354

Query: 368 GKMVVSKPLYVALAQRKEDRRARL 391
           G++V +KPLYVALAQRKE+R+A L
Sbjct: 355 GRIVSTKPLYVALAQRKEERKAIL 378



 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 172/294 (58%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D    R  GYG+V+F   + A RA
Sbjct: 97  GVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSR--GYGFVHFETQEAANRA 154

Query: 82  LEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSA 134
           ++ +N   LN + + V +  S R+  L + GA      N++IKN  + +D K L + FSA
Sbjct: 155 IQTMNGMLLNDRKVFVGHFKSRREREL-EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSA 213

Query: 135 FGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERD 194
           FGN LS KV  D  G+S+G+GFV + N E AQKA+ ++NG  +N + +YVG   ++ ER 
Sbjct: 214 FGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQ 273

Query: 195 TE------------INKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
            E            IN+ +  N+YVKNL +   ++ L+K F  YGTITSA VM +G G S
Sbjct: 274 GELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRL 386



 Score =  171 bits (434), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 166/292 (56%), Gaps = 20/292 (6%)

Query: 106 LRKSGAG----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFD 160
           +  +GAG    ++++ +L   +    L++ FS  G I+S +V  D+   +S GY ++ F 
Sbjct: 1   MNATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQ 60

Query: 161 NEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQ 220
               A++A++ +N  ++  + + +       +RD  + KS   NV++KNL ES   + L 
Sbjct: 61  QPADAERALDTMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDESIDNKALY 116

Query: 221 KSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQK 280
            +F  +G I S  V+ D  G S+ +GFV+FE  + A RA++ +NG   +D++ +VG  + 
Sbjct: 117 DTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKS 175

Query: 281 KSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRD 340
           + ERELE            A   +  N+YIKN  + +DD++L+++FS FG+  S KVM D
Sbjct: 176 RRERELEY----------GAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD 225

Query: 341 PSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
            +G SRG GFV +   EEA +A+ EMNGK V  + +YV  AQ++ +R+  L+
Sbjct: 226 DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELK 277


>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
           DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1
          Length = 754

 Score =  438 bits (1127), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/434 (49%), Positives = 291/434 (67%), Gaps = 55/434 (12%)

Query: 17  NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQ 76
           N NQ  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  
Sbjct: 44  NNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 103

Query: 77  EAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 136
           +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFG
Sbjct: 104 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 163

Query: 137 NILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE 196
           NILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R ++
Sbjct: 164 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 223

Query: 197 IN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSD 254
            +  K+ FTN+Y+KN+    TEE+ +K F ++G ITSA + RD +GKS+ FGFVN+   +
Sbjct: 224 FDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHE 283

Query: 255 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLD 314
            A  AV+ ++ K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL 
Sbjct: 284 SAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 343

Query: 315 DSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---------------------------- 346
           D +DDEKL++LF P+G+ITS KVMRD +   R                            
Sbjct: 344 DDVDDEKLRELFGPYGTITSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEE 403

Query: 347 -------------------------GSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALA 381
                                    G GFV FS+P+EAS+A+ EMN +MV  KPLYVALA
Sbjct: 404 KPKESDEEKKDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALA 463

Query: 382 QRKEDRRARLQVCL 395
           QRK+ RR++L+  +
Sbjct: 464 QRKDVRRSQLEASI 477


>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B OS=Xenopus laevis
           GN=epabp-b PE=2 SV=1
          Length = 629

 Score =  438 bits (1127), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/378 (53%), Positives = 286/378 (75%), Gaps = 4/378 (1%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
           A   ++   SLY+GDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y+NF   
Sbjct: 3   ATRAEYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FIKNLD +ID+KAL+DTFSAF
Sbjct: 63  ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAF 122

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G+ILSCKV  D  G S+GYGFV F+ +E+A +AI+ +NGMLLND++V+VGHF  ++ER+ 
Sbjct: 123 GDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181

Query: 196 EINKS--KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           E      +FTNVY+KN  E   ++ L++ F  +G   S  VM D  G+S+ FGFVN+ N 
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNH 241

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           ++A +AV  +NGK+ + +  YVG+AQK+ ER+ ELK +FEQ  +E  +++QG NLY+KNL
Sbjct: 242 EEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVS 373
           DD IDD++L++ FSP+G+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +
Sbjct: 302 DDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVST 360

Query: 374 KPLYVALAQRKEDRRARL 391
           KPLYVALAQRKE+R+A L
Sbjct: 361 KPLYVALAQRKEERKAIL 378



 Score =  188 bits (477), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 174/295 (58%), Gaps = 25/295 (8%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRV-CRDLSTRRSLGYGYVNFSNAQEAAR 80
           G  ++++ +L+ ++ +  LYD F+  G ++S +V C +  +R   GYG+V+F   + A R
Sbjct: 97  GVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR---GYGFVHFETQEAANR 153

Query: 81  ALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFS 133
           A++ +N   LN + + V +  S R+  L + GA      N++IKN  + +D K L + FS
Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRREREL-EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFS 212

Query: 134 AFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER 193
           AFGN LS KV  D +G+S+G+GFV + N E AQKA+ ++NG  +N + VYVG   ++ ER
Sbjct: 213 AFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIER 272

Query: 194 DTE------------INKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGK 241
             E            IN+ +  N+YVKNL +   ++ L+K F  YGTITS  VM +G G 
Sbjct: 273 QGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GH 331

Query: 242 SKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           SK FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRL 386



 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 161/282 (57%), Gaps = 16/282 (5%)

Query: 112 GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDNEESAQKAIE 170
            +++I +L   +    L++ FS  G I+S +V  D+   +S GY ++ F     A++A++
Sbjct: 11  ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70

Query: 171 KLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTIT 230
            +N  ++  + + +       +RD  + KS   NV++KNL +S   + L  +F  +G I 
Sbjct: 71  TMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDIL 126

Query: 231 SAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKH 290
           S  V+ D  G S+ +GFV+FE  + A RA++ +NG   +D++ +VG  + + ERELE   
Sbjct: 127 SCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEY-- 183

Query: 291 QFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGF 350
                    A   +  N+YIKN  + +DD++LK++FS FG+  S KVM D SG SRG GF
Sbjct: 184 --------GAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGF 235

Query: 351 VAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           V +   EEA +A+ EMNGK V  + +YV  AQ++ +R+  L+
Sbjct: 236 VNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELK 277


>sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=PAB1 PE=1 SV=4
          Length = 577

 Score =  438 bits (1126), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/387 (53%), Positives = 293/387 (75%), Gaps = 2/387 (0%)

Query: 7   QGQNVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLG 66
           Q Q   G  + + +  + SLYVGDLE +V+++ LYD+F+ +G V S+RVCRD  T+ SLG
Sbjct: 21  QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80

Query: 67  YGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHK 126
           Y YVNF++ +   +A+E LN+TP+ G+  R+M+S RDPSLRK G+GNIFIKNL   ID+K
Sbjct: 81  YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140

Query: 127 ALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGH 186
           AL+DTFS FG+ILS K+ATD NG+SKG+GFV F+ E +A++AI+ LNGMLLN +++YV  
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAP 200

Query: 187 FLRKQERDTEINKSK--FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKC 244
            L ++ERD+++ ++K  +TN+YVKN++  TT+E  Q+ F ++G I SA + +D DGK K 
Sbjct: 201 HLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKG 260

Query: 245 FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQ 304
           FGFVN+E  +DA +AVEALN  + + ++ YVG+AQKK+ER   LK Q+E    E   K+Q
Sbjct: 261 FGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQ 320

Query: 305 GANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALL 364
           G NL++KNLDDS+DDEKL++ F+P+G+ITS KVMR  +G S+G GFV FSTPEEA++A+ 
Sbjct: 321 GVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAIT 380

Query: 365 EMNGKMVVSKPLYVALAQRKEDRRARL 391
           E N ++V  KPLYVA+AQRK+ RR++L
Sbjct: 381 EKNQQIVAGKPLYVAIAQRKDVRRSQL 407



 Score =  166 bits (419), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 161/290 (55%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G+ ++++ +L  ++ +  LYD F+  G ++S ++  D    +S G+G+V+F     A  A
Sbjct: 124 GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEA 182

Query: 82  LEMLNFTPLNGKPIRVM----YSHRDPSLRKSGA--GNIFIKNLDKAIDHKALHDTFSAF 135
           ++ LN   LNG+ I V        RD  L ++ A   N+++KN++     +   + F+ F
Sbjct: 183 IDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 242

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG---------H 186
           G I+S  +  D +G+ KG+GFV ++  E A KA+E LN   LN +++YVG         H
Sbjct: 243 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMH 302

Query: 187 FLRKQE---RDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
            L+KQ    R  ++ K +  N++VKNL +S  +E L++ F  YGTITSA VMR  +GKSK
Sbjct: 303 VLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSK 362

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV F   ++A +A+   N +    K  YV  AQ+K  R  +L  Q +
Sbjct: 363 GFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412



 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 25/195 (12%)

Query: 203 TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKC-FGFVNFENSDDAARAVE 261
            ++YV +L  S +E  L   F   G+++S  V RD   K+   + +VNF + +   +A+E
Sbjct: 38  ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97

Query: 262 ALNGKKFDDK----EWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSI 317
            LN      +     W        S+R+  L+            K    N++IKNL   I
Sbjct: 98  QLNYTPIKGRLCRIMW--------SQRDPSLR------------KKGSGNIFIKNLHPDI 137

Query: 318 DDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLY 377
           D++ L   FS FG I S K+  D +G S+G GFV F     A  A+  +NG ++  + +Y
Sbjct: 138 DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIY 197

Query: 378 VALAQRKEDRRARLQ 392
           VA    +++R ++L+
Sbjct: 198 VAPHLSRKERDSQLE 212



 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 24  TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALE 83
            +L+V +L+ +V D +L + F   G + S +V R     +S G+G+V FS  +EA +A+ 
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATKAIT 380

Query: 84  MLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKN 118
             N   + GKP+ V  + R    R   A  I  +N
Sbjct: 381 EKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 415


>sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A OS=Xenopus laevis
           GN=epabp-a PE=1 SV=2
          Length = 629

 Score =  437 bits (1125), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/384 (53%), Positives = 286/384 (74%), Gaps = 9/384 (2%)

Query: 10  NVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGY 69
           N  G G     +   SLY+GDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSL Y Y
Sbjct: 2   NATGAG-----YPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAY 56

Query: 70  VNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALH 129
           +NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FIKNLD++ID+KAL+
Sbjct: 57  INFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALY 116

Query: 130 DTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLR 189
           DTFSAFGNILSCKV  D +G S+GYGFV F+  E+A +AI+ +NGMLLND++V+VGHF  
Sbjct: 117 DTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKS 175

Query: 190 KQERDTEINKS--KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGF 247
           ++ER+ E      +FTNVY+KN  E   ++ L++ F  +G   S  VM D  G+S+ FGF
Sbjct: 176 RRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGF 235

Query: 248 VNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGAN 307
           VN+ N ++A +AV  +NGK+ + +  YVG+AQK+ ER+ ELK +FEQ  +E  +++QG N
Sbjct: 236 VNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVN 295

Query: 308 LYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMN 367
           LY+KNLDD IDD++L++ F P+G+ITS KVM +  G S+G GFV FS+PEEA++A+ EMN
Sbjct: 296 LYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMN 354

Query: 368 GKMVVSKPLYVALAQRKEDRRARL 391
           G++V +KPLYVALAQRKE+R+A L
Sbjct: 355 GRIVSTKPLYVALAQRKEERKAIL 378



 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 174/294 (59%), Gaps = 23/294 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  LYD F+  G ++S +V  D    R  GYG+V+F   + A RA
Sbjct: 97  GVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSR--GYGFVHFETHEAANRA 154

Query: 82  LEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSA 134
           ++ +N   LN + + V +  S R+  L + GA      N++IKN  + +D K L + FSA
Sbjct: 155 IQTMNGMLLNDRKVFVGHFKSRREREL-EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSA 213

Query: 135 FGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERD 194
           FGN LS KV  D +G+S+G+GFV + N E AQKA+ ++NG  +N + +YVG   ++ ER 
Sbjct: 214 FGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQ 273

Query: 195 TE------------INKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
           +E            IN+ +  N+YVKNL +   ++ L+K F  YGTITSA VM +G G S
Sbjct: 274 SELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHS 332

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           K FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +Q+ Q +
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRL 386



 Score =  171 bits (433), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 166/292 (56%), Gaps = 20/292 (6%)

Query: 106 LRKSGAG----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFD 160
           +  +GAG    +++I +L   +    L++ FS  G I+S +V  D+   +S  Y ++ F 
Sbjct: 1   MNATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQ 60

Query: 161 NEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQ 220
               A++A++ +N  ++  + + +       +RD  + KS   NV++KNL ES   + L 
Sbjct: 61  QPADAERALDTMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDESIDNKALY 116

Query: 221 KSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQK 280
            +F  +G I S  V+ D  G S+ +GFV+FE  + A RA++ +NG   +D++ +VG  + 
Sbjct: 117 DTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKS 175

Query: 281 KSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRD 340
           + ERELE            A   +  N+YIKN  + +DD++L+++FS FG+  S KVM D
Sbjct: 176 RRERELEY----------GAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD 225

Query: 341 PSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
            SG SRG GFV +   EEA +A+ EMNGK V  + +YV  AQ++ +R++ L+
Sbjct: 226 DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELK 277


>sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2
          Length = 631

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/373 (55%), Positives = 281/373 (75%), Gaps = 4/373 (1%)

Query: 21  FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAAR 80
           + T SLYVGDL  +VT++ LY+ F+  G ++S+R+CRDL T  S  Y YVNF + ++A  
Sbjct: 8   YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67

Query: 81  ALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILS 140
           AL+ +NF  + GKP+R+M+S RDPSLRKSG GNIF+KNLDK+I++KAL+DT SAFGNILS
Sbjct: 68  ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127

Query: 141 CKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI--N 198
           C V  D NG SKGYGFV F+  E+A++AI+K+NGMLLN ++V+VG F  ++ER+ E+   
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186

Query: 199 KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAAR 258
             +F NVY+KN  E   +E L+  FG++G   S  VM D  GKSK FGFV+FE  +DA +
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246

Query: 259 AVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSID 318
           AV+ +NGK+ + K+ YVG+AQKK ER+ ELK  FEQ  ++   ++Q  NLY+KNLDD ID
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGID 306

Query: 319 DEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYV 378
           DE+L++ FSPFG+ITS KVM +  G S+G GFV FS+PEEA++A+ EMNG++V +KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365

Query: 379 ALAQRKEDRRARL 391
           ALAQRKE+R+A L
Sbjct: 366 ALAQRKEERQAYL 378



 Score =  194 bits (492), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 21/293 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  +++V +L+ ++ +  LYD  +  G ++S  V  D +   S GYG+V+F   + A RA
Sbjct: 97  GVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERA 154

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRKSGA-----GNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LNG+ + V  +  R     + GA      N++IKN  + +D + L D F  F
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKF 214

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG   +K ER T
Sbjct: 215 GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT 274

Query: 196 E------------INKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E            I + +  N+YVKNL +   +E L+K+F  +GTITSA VM +G G+SK
Sbjct: 275 ELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSK 333

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
            FGFV F + ++A +AV  +NG+    K  YV  AQ+K ER+  L +++ Q M
Sbjct: 334 GFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRM 386



 Score =  167 bits (424), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 165/298 (55%), Gaps = 16/298 (5%)

Query: 103 DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDN 161
           +PS       ++++ +L   +    L++ FS  G ILS ++  DL    S  Y +V F +
Sbjct: 2   NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61

Query: 162 EESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQK 221
            + A+ A++ +N  ++  K V +       +RD  + KS   N++VKNL +S   + L  
Sbjct: 62  TKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYD 117

Query: 222 SFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           +   +G I S  V+ D +G SK +GFV+FE  + A RA++ +NG   + ++ +VG+ + +
Sbjct: 118 TVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSR 176

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
            ERE EL  +        A +F   N+YIKN  + +DDE+LK LF  FG   S KVM D 
Sbjct: 177 KEREAELGAR--------AKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCLLQCR 399
           SG S+G GFV+F   E+A +A+ EMNGK +  K +YV  AQ+K +R+  L+    Q +
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284



 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 296 MKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGS---GFVA 352
           M  +   +  A+LY+ +L   + +  L + FSP G I S ++ RD   I+ GS    +V 
Sbjct: 1   MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRD--LITSGSSNYAYVN 58

Query: 353 FSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
           F   ++A  AL  MN  ++  KP+ +  +QR    R
Sbjct: 59  FQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLR 94


>sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp
           PE=1 SV=3
          Length = 634

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/370 (58%), Positives = 281/370 (75%), Gaps = 3/370 (0%)

Query: 25  SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEM 84
           SLYVGDL  +V +S L+D F+  G V+S+RVCRD+ TRRSLGY YVNF    +A RAL+ 
Sbjct: 3   SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62

Query: 85  LNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVA 144
           +NF  +  KPIR+M+S RDPSLR+SG GN+FIKNLD+AID+KA++DTFSAFGNILSCKVA
Sbjct: 63  MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122

Query: 145 TDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI-NKSK-F 202
           TD  G SKGYGFV F+ EE+A  +I+K+NGMLLN K+VYVG F+ ++ER+ E+  K+K F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182

Query: 203 TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEA 262
           TNVYVKN +E   +E L++ F  YG ITS  VM   DGKSK FGFV FE ++ A  AV+A
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242

Query: 263 LNGKKF-DDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEK 321
           LNGK   + K  YV +AQKK+ER+ ELK +FE+  ++  +   G NLY+KNLDD+IDD++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302

Query: 322 LKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALA 381
           L+  FSP+G+ITS KVM D  G S+G GFV F+   EA+ A+ E+NG++V SKPLYVALA
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362

Query: 382 QRKEDRRARL 391
           QRKE+R+A L
Sbjct: 363 QRKEERKAHL 372



 Score =  171 bits (434), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 158/283 (55%), Gaps = 16/283 (5%)

Query: 112 GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIE 170
            ++++ +L + ++   L D FS+ G +LS +V  D +  +S GY +V F     A++A++
Sbjct: 2   ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61

Query: 171 KLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTIT 230
            +N  L+ +K + +       +RD  + +S   NV++KNL  +   + +  +F  +G I 
Sbjct: 62  TMNFDLVRNKPIRIMW----SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL 117

Query: 231 SAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKH 290
           S  V  D  G SK +GFV+FE  + A  +++ +NG   + K+ YVGK   + ERE EL  
Sbjct: 118 SCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELG- 176

Query: 291 QFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGF 350
                  E A  F   N+Y+KN  +  DDEKLK+ F P+G ITS KVM    G S+G GF
Sbjct: 177 -------EKAKLF--TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGF 227

Query: 351 VAFSTPEEASRALLEMNGK-MVVSKPLYVALAQRKEDRRARLQ 392
           VAF T E A  A+  +NGK M   K LYVA AQ+K +R+  L+
Sbjct: 228 VAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELK 270



 Score =  162 bits (411), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 162/295 (54%), Gaps = 22/295 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+  + +  +YD F+  G ++S +V  D     S GYG+V+F   + A  +
Sbjct: 88  GVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTS 146

Query: 82  LEMLNFTPLNGKPIRV----MYSHRDPSLRKSGA--GNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LNGK + V        R+  L +      N+++KN  +  D + L + F  +
Sbjct: 147 IDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPY 206

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLND-KQVYVGHFLRKQERD 194
           G I S KV +  +G+SKG+GFV F+  E+A+ A++ LNG  + + K +YV    +K ER 
Sbjct: 207 GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQ 266

Query: 195 TEINKSKF-------------TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGK 241
            E+ K KF              N+YVKNL ++  ++ L+ +F  YG ITSA VM D +G+
Sbjct: 267 QEL-KRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR 325

Query: 242 SKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 296
           SK FGFV F  + +A  AV  LNG+    K  YV  AQ+K ER+  L  Q+ ++M
Sbjct: 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHM 380


>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
           2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3
           SV=1
          Length = 661

 Score =  436 bits (1122), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/372 (55%), Positives = 285/372 (76%), Gaps = 2/372 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  +++SLGY YVN+   ++  +A+
Sbjct: 66  SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAI 125

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+TP+ G+P R+M+S RDPS R+SG GNIFIKNL  AID+KALHDTFSAFG ILS K
Sbjct: 126 EELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVK 185

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VATD  GQSK +GFV ++ EE+AQ AIE +NGMLLND++VYVG  + K++R++++   K+
Sbjct: 186 VATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKA 245

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            +TN+YVKN+  + TE++ ++ F  +G ITS  + +D +GKSK FGFVNFE  + AA+AV
Sbjct: 246 NYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAV 305

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           E LN K+ + ++ YVG+AQKK ER  ELK Q+E    E   K+QG NL++KNLD+ ID E
Sbjct: 306 EELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSE 365

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           KL++ F PFG+ITS KVM D +G S+G GFV FSTPEEA++A+ EMN +MV  KPLYVAL
Sbjct: 366 KLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVAL 425

Query: 381 AQRKEDRRARLQ 392
           AQRK+ RR++L+
Sbjct: 426 AQRKDVRRSQLE 437



 Score =  169 bits (428), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 165/296 (55%), Gaps = 19/296 (6%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A + G  ++++ +L   + +  L+D F+  G+++SV+V  D    +S  +G+V++   
Sbjct: 147 PSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETE 205

Query: 76  QEAARALEMLNFTPLNGKPI----RVMYSHRDPSLR--KSGAGNIFIKNLDKAIDHKALH 129
           + A  A+E +N   LN + +     V    R+  L   K+   NI++KN+D A   K   
Sbjct: 206 EAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFE 265

Query: 130 DTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLR 189
           + F+ FG I S  +  D  G+SKG+GFV F+  E+A KA+E+LN   +N +++YVG   +
Sbjct: 266 ELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQK 325

Query: 190 KQERDTEINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRD 237
           K+ER  E+ K          SK+   N++VKNL E    E L++ F  +GTITS+ VM D
Sbjct: 326 KRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVD 385

Query: 238 GDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
             GKSK FGFV F   ++A +A+  +N +  + K  YV  AQ+K  R  +L+ Q +
Sbjct: 386 DAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVRRSQLEQQIQ 441


>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
           CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
          Length = 732

 Score =  436 bits (1121), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/433 (49%), Positives = 290/433 (66%), Gaps = 53/433 (12%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
           A  +Q  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN+++ 
Sbjct: 34  ATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDT 93

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
               RAL+ LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AF
Sbjct: 94  AHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAF 153

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R +
Sbjct: 154 GNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQS 213

Query: 196 EIN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           +    K+ FTN+Y+KN+     +E+ +K F ++G ITSA + RD +GKS+ FGFVNF   
Sbjct: 214 KFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTH 273

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           + A  AVE +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL
Sbjct: 274 ESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNL 333

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRD--------------------------------- 340
            D +DD+KL++LF P+G+ITS KVMRD                                 
Sbjct: 334 TDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAA 393

Query: 341 ------------------PSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
                             P G S+G GFV FS+P+EAS+A+ EMN +MV  KPLYVALAQ
Sbjct: 394 EEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQ 453

Query: 383 RKEDRRARLQVCL 395
           RK+ RR++L+  +
Sbjct: 454 RKDVRRSQLEASI 466



 Score =  168 bits (426), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 167/314 (53%), Gaps = 21/314 (6%)

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E  N TP N     V       +  +  + ++++  LD ++    L++ FS+ G + S +
Sbjct: 13  ENTNGTPDNAPAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIR 72

Query: 143 VATD-LNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSK 201
           V  D +  +S GY +V +++    ++A+++LN  L+  K   +       +RD  + K+ 
Sbjct: 73  VCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRI----MWSQRDPALRKTG 128

Query: 202 FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVE 261
             NV++KNL  +   + L  +F  +G I S  V +D  G SK +GFV++E ++ A  A++
Sbjct: 129 QGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIK 188

Query: 262 ALNGKKFDDKEWYVGKAQKKSEREL---ELKHQFEQNMKEAADKFQGANLYIKNLDDSID 318
            +NG   +DK+ +VG    K +R+    E+K  F              N+YIKN+D  ++
Sbjct: 189 HVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANF-------------TNIYIKNIDPEVE 235

Query: 319 DEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYV 378
           DE+ ++LF  FG ITS  + RD  G SRG GFV FST E A  A+ EMN K V S+ LYV
Sbjct: 236 DEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYV 295

Query: 379 ALAQRKEDRRARLQ 392
             AQ+K +R   L+
Sbjct: 296 GRAQKKHEREEELR 309



 Score = 45.1 bits (105), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 240 GKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSER--ELELKHQFEQNMK 297
           GKSK FGFV F + D+A++AV  +N +  + K  YV  AQ+K  R  +LE   Q   N++
Sbjct: 414 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNNIR 473


>sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
           DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAB1 PE=3
           SV=1
          Length = 592

 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/370 (55%), Positives = 281/370 (75%), Gaps = 2/370 (0%)

Query: 24  TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALE 83
            SLYVG+L+ N+T++ LYD+F+ +G + S+RVCRD  T+ SLGY YVN+++ +   +A++
Sbjct: 50  ASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQ 109

Query: 84  MLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 143
            LN+  +NG+P R+M+S RDP++RK G+GNIFIKNL  AID+KALH+TFS FG +LSCKV
Sbjct: 110 ELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKV 169

Query: 144 ATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSK-- 201
           A D NG S+G+GFV F  E  A+ AIE +NGML+N  +VYV   + K++R +++ ++K  
Sbjct: 170 ALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKAN 229

Query: 202 FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVE 261
           FTN+YVKN+   TT+E+ ++ F +YG I SA + +D +GK K FGFVNF + + AA+AVE
Sbjct: 230 FTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVE 289

Query: 262 ALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEK 321
            LNGK+F  +  YVG+AQKK ER  ELK Q+EQ   E   KFQG NL+IKNLDDSIDDEK
Sbjct: 290 ELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEK 349

Query: 322 LKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALA 381
           LK+ F+P+G+ITS +VMRD  G S+G GFV FS+PEEA++A+ E N ++V  KPLYVA+A
Sbjct: 350 LKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIA 409

Query: 382 QRKEDRRARL 391
           QRK+ RR++L
Sbjct: 410 QRKDVRRSQL 419



 Score =  160 bits (405), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 158/290 (54%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G+ ++++ +L   + +  L++ F+  G+V+S +V  D     S G+G+V+F    +A  A
Sbjct: 136 GSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALD-ENGNSRGFGFVHFKEESDAKDA 194

Query: 82  LEMLNFTPLNGKPIRV-MYSHRDPSLRK-----SGAGNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   +NG  + V M+  +   + K     +   NI++KN+D     +     FS +
Sbjct: 195 IEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQY 254

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G I+S  +  D  G+ KG+GFV F +  +A KA+E+LNG     + +YVG   +K ER  
Sbjct: 255 GEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAE 314

Query: 196 EINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+ K          +KF   N+++KNL +S  +E L++ F  YGTITSA VMRD +G SK
Sbjct: 315 ELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSK 374

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV F + ++A +A+   N +    K  YV  AQ+K  R  +L  Q +
Sbjct: 375 GFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 424



 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 15/289 (5%)

Query: 112 GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIE 170
            ++++  LD  I    L+D FS  G I S +V  D +   S GY +V + + E+ +KAI+
Sbjct: 50  ASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQ 109

Query: 171 KLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTIT 230
           +LN   +N +   +       ERD  I K    N+++KNL  +   + L ++F  +G + 
Sbjct: 110 ELNYAEINGRPCRI----MWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVL 165

Query: 231 SAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKH 290
           S  V  D +G S+ FGFV+F+   DA  A+EA+NG   +  E YV     K +R  +L+ 
Sbjct: 166 SCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLE- 224

Query: 291 QFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGF 350
                  EA   F   N+Y+KN+D    DE+ +QLFS +G I S  + +D  G  +G GF
Sbjct: 225 -------EAKANF--TNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGF 275

Query: 351 VAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCLLQCR 399
           V F     A++A+ E+NGK   S+ LYV  AQ+K +R   L+    Q R
Sbjct: 276 VNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYR 324



 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 20  QFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAA 79
           +F   +L++ +L+ ++ D +L + F   G + S RV RD     S G+G+V FS+ +EA 
Sbjct: 330 KFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRD-QEGNSKGFGFVCFSSPEEAT 388

Query: 80  RALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKN 118
           +A+   N   + GKP+ V  + R    R   A  I  +N
Sbjct: 389 KAMTEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 427


>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
           GN=pab1 PE=3 SV=1
          Length = 753

 Score =  434 bits (1116), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/433 (49%), Positives = 293/433 (67%), Gaps = 55/433 (12%)

Query: 17  NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQ 76
           + +Q  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  
Sbjct: 41  STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100

Query: 77  EAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 136
           +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFG
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 160

Query: 137 NILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE 196
           NILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R ++
Sbjct: 161 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 220

Query: 197 IN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSD 254
               K+ FTNVY+KNL +  +EE+ ++ F ++G ITSA + RD +GKS+ FGFVN+   D
Sbjct: 221 FEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHD 280

Query: 255 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLD 314
            A  AV+ +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL 
Sbjct: 281 SAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 340

Query: 315 DSIDDEKLKQLFSPFGSITSCKVMRDPSGISR---------------------------- 346
           D IDDEKL+++F+P+G+ITS KVMRD + I R                            
Sbjct: 341 DDIDDEKLREMFAPYGTITSAKVMRD-TNIERTQTPDSDKEKKEESKEEKPEAAEKTEEA 399

Query: 347 ------------------------GSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
                                   G GFV FS+P+EAS+A+ EMN +M+  KPLYVALAQ
Sbjct: 400 AKESGDDQDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMINGKPLYVALAQ 459

Query: 383 RKEDRRARLQVCL 395
           RK+ RR++L+  +
Sbjct: 460 RKDVRRSQLEASI 472


>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
           CBS 708.71 / DSM 1257 / FGSC 987) GN=pab-1 PE=3 SV=1
          Length = 764

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/416 (50%), Positives = 292/416 (70%), Gaps = 43/416 (10%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD  TRRSLGY YVN++   +  +AL
Sbjct: 59  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+T + G+P R+M+S RDP+LRK+GAGNIFIKNLD AID+KALHDTF+AFGNILSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D +G SKGYGFV ++ +E+A +AI+ +NGMLLN+K+VYVGH + K++R ++    K+
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTNVYVKN++   T+E+ ++ F ++G +TS+ + RD +GKS+ FGFVNF   + AA+AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAV 298

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LNGK F  ++ YVG+AQKK ERE EL+  +E    E A+K+QG NLYIKNL D +DD+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358

Query: 321 KLKQLFSPFGSITSCKVMRDP--------------------------------------- 341
           KL+ +FS +G ITS KVMRD                                        
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGD 418

Query: 342 --SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
              G S+G GFV FS P++A++A+ EMN +MV  KPLYVALAQRK+ R+++L+  +
Sbjct: 419 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASI 474



 Score = 42.4 bits (98), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 41/132 (31%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTR--------------- 62
           AN++   +LY+ +L  +V D +L  +F++ G + S +V RD                   
Sbjct: 338 ANKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKE 397

Query: 63  -------------------------RSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV 97
                                    +S G+G+V FSN  +A +A+  +N   ++GKP+ V
Sbjct: 398 GETKEEEQNEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYV 457

Query: 98  MYSHRDPSLRKS 109
             + R   +RKS
Sbjct: 458 ALAQRK-DVRKS 468


>sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum
           GN=pabpc1A PE=1 SV=1
          Length = 565

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/374 (56%), Positives = 278/374 (74%), Gaps = 13/374 (3%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           ++SLYVGDL   V++  L+++FNQ+G V ++RVCRD +TRRSL Y YVN+ N  +A RAL
Sbjct: 9   SSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERAL 68

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           + LN TP+ GK  R+M+S RDPSLRKSG GN+FIKNLDK IDHKAL+DTFSAFGNILSCK
Sbjct: 69  DTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCK 128

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER--DTEINKS 200
           V TD    SKG+GFV ++ +ESA KAI K+NGM++N ++V+VG F   +ER   TE+   
Sbjct: 129 VVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQPTEV--- 185

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
           KFTNV+ KNLSE    + L++   +YG IT+  +M D  GKSK FGF NFE+++ A   V
Sbjct: 186 KFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVV 245

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           E  NGK F  K  Y G+AQKK ERE ELKH FE        K+QG NLYIKN+DDSID++
Sbjct: 246 ENENGKIFHGKPIYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNIDDSIDND 298

Query: 321 KLKQLFSPFGSITSCKVMR-DPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVA 379
           KL+++FS FG+ITS  VM+ D +  S+G GFV ++ P+EA+RA+ EMNG+M+ +KPLYVA
Sbjct: 299 KLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVA 358

Query: 380 LAQRKEDRRARLQV 393
           LAQRK+ RRA+L++
Sbjct: 359 LAQRKDIRRAQLEM 372



 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 154/287 (53%), Gaps = 14/287 (4%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+  +    LYD F+  G ++S +V  D     S G+G+V++   + A +A
Sbjct: 96  GVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTD-DGNSSKGFGFVHYETQESADKA 154

Query: 82  LEMLNFTPLNGK-----PIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 136
           +  +N   +NG+     P +       P+  K    N+F KNL + +    L +    +G
Sbjct: 155 IAKVNGMMINGQKVFVGPFKSSKERGQPTEVK--FTNVFFKNLSEDVGPDQLKELLQQYG 212

Query: 137 NILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE 196
            I +  +  D  G+SKG+GF  F++ E+A+  +E  NG + + K +Y G   +K ER+ E
Sbjct: 213 EITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRAQKKIEREAE 272

Query: 197 I-----NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGK-SKCFGFVNF 250
           +      K +  N+Y+KN+ +S   + L++ F ++GTITSA+VM+D     SK FGFV +
Sbjct: 273 LKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCY 332

Query: 251 ENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMK 297
              D+A RAV  +NG+    K  YV  AQ+K  R  +L+ Q +Q  K
Sbjct: 333 TAPDEATRAVTEMNGRMIGTKPLYVALAQRKDIRRAQLEMQHQQKFK 379


>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 /
           DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1
          Length = 783

 Score =  430 bits (1105), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/420 (50%), Positives = 291/420 (69%), Gaps = 47/420 (11%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD  TRRSLGY YVN+++  +  +AL
Sbjct: 64  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKAL 123

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+T + G+P R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCK
Sbjct: 124 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 183

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D NG SKGYGFV ++ +E+A +AI+ +N MLLN+K+VYVG+ + K++R ++    K+
Sbjct: 184 VAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKA 243

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTN+YVKN+S   T+E+ +  F +YG +TS+ + RD +GKS+ FGFVNF   + AA+AV
Sbjct: 244 NFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAV 303

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           E LNGK+F  ++ YVG+AQKK ERE EL+  +E    E A+K+QG NLYIKNL D IDD+
Sbjct: 304 EELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDD 363

Query: 321 KLKQLFSPFGSITSCKVMRDPS-------------------------------------- 342
           KL+Q+FS +G ITS KVMRD                                        
Sbjct: 364 KLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTE 423

Query: 343 -------GISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
                  G S+G GFV FS P++A++A+ EMN +M+  KPLYVALAQRK+ R+ +L+  +
Sbjct: 424 KKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVRKNQLEASI 483



 Score = 43.1 bits (100), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 44/129 (34%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTR--------------- 62
           AN++   +LY+ +L  ++ D +L  +F++ G + S +V RD  T                
Sbjct: 343 ANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENK 402

Query: 63  -----------------------------RSLGYGYVNFSNAQEAARALEMLNFTPLNGK 93
                                        +S G+G+V FSN  +A +A+  +N   + GK
Sbjct: 403 KEGEQAAEAEGEAEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGK 462

Query: 94  PIRVMYSHR 102
           P+ V  + R
Sbjct: 463 PLYVALAQR 471


>sp|P0CP46|PABP_CRYNJ Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Cryptococcus neoformans var. neoformans serotype D
           (strain JEC21 / ATCC MYA-565) GN=PAB1 PE=3 SV=1
          Length = 673

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/377 (54%), Positives = 279/377 (74%), Gaps = 2/377 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L+++FN +G V S+RVCRD  TRRSLGY YVN+ NA +  RAL
Sbjct: 45  SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN++ + G+  R+M+S RDP+LRK+G GNIFIKNLD++ID+KALHDTF+AFG+ILSCK
Sbjct: 105 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCK 164

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           V TD NG+S+G+ FV +   E+A  AI+ +NGMLLNDK+VYVGH + K+ER +++   ++
Sbjct: 165 VGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRA 224

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
           +FTNVY+KN+    T+ + +     +G   S  + RD  G SK FGFVN+EN + A +AV
Sbjct: 225 QFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAV 284

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LN K+ + K+ Y G+AQ KSERE ELK   E+   E   K  G NLY+KNLDD  DD+
Sbjct: 285 DELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDD 344

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           +L+  F  FG+ITS KVMRD SG+SRG GFV +S+P+EA++A+ EMNGKM+ +KPLYVAL
Sbjct: 345 RLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVAL 404

Query: 381 AQRKEDRRARLQVCLLQ 397
           AQRK+ RR  L+  + Q
Sbjct: 405 AQRKDVRRQALESQIAQ 421



 Score =  160 bits (405), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 21/296 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  L+D F   G ++S +V  D    +S G+ +V++S  + A  A
Sbjct: 132 GQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAA 190

Query: 82  LEMLNFTPLNGKPIRVMYSHRDPSLRKSGA-------GNIFIKNLDKAIDHKALHDTFSA 134
           ++ +N   LN K + V + H     R S          N++IKN+D  +      D    
Sbjct: 191 IKAVNGMLLNDKKVYVGH-HVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKP 249

Query: 135 FGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERD 194
           FG  +S  ++ D  G SKG+GFV ++N ESA+KA+++LN   +N K++Y G    K ER+
Sbjct: 250 FGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSERE 309

Query: 195 TEINKSK------------FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
            E+ KS               N+YVKNL +   ++ L+  F  +GTITS+ VMRD  G S
Sbjct: 310 AELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVS 369

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKE 298
           + FGFV + + D+A +AV  +NGK    K  YV  AQ+K  R   L+ Q  Q  ++
Sbjct: 370 RGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQQ 425


>sp|P0CP47|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Cryptococcus neoformans var. neoformans serotype D
           (strain B-3501A) GN=PAB1 PE=3 SV=1
          Length = 673

 Score =  427 bits (1099), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/377 (54%), Positives = 279/377 (74%), Gaps = 2/377 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L+++FN +G V S+RVCRD  TRRSLGY YVN+ NA +  RAL
Sbjct: 45  SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN++ + G+  R+M+S RDP+LRK+G GNIFIKNLD++ID+KALHDTF+AFG+ILSCK
Sbjct: 105 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCK 164

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           V TD NG+S+G+ FV +   E+A  AI+ +NGMLLNDK+VYVGH + K+ER +++   ++
Sbjct: 165 VGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRA 224

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
           +FTNVY+KN+    T+ + +     +G   S  + RD  G SK FGFVN+EN + A +AV
Sbjct: 225 QFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAV 284

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LN K+ + K+ Y G+AQ KSERE ELK   E+   E   K  G NLY+KNLDD  DD+
Sbjct: 285 DELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDD 344

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           +L+  F  FG+ITS KVMRD SG+SRG GFV +S+P+EA++A+ EMNGKM+ +KPLYVAL
Sbjct: 345 RLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVAL 404

Query: 381 AQRKEDRRARLQVCLLQ 397
           AQRK+ RR  L+  + Q
Sbjct: 405 AQRKDVRRQALESQIAQ 421



 Score =  160 bits (405), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 21/296 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+ ++ +  L+D F   G ++S +V  D    +S G+ +V++S  + A  A
Sbjct: 132 GQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAA 190

Query: 82  LEMLNFTPLNGKPIRVMYSHRDPSLRKSGA-------GNIFIKNLDKAIDHKALHDTFSA 134
           ++ +N   LN K + V + H     R S          N++IKN+D  +      D    
Sbjct: 191 IKAVNGMLLNDKKVYVGH-HVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKP 249

Query: 135 FGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERD 194
           FG  +S  ++ D  G SKG+GFV ++N ESA+KA+++LN   +N K++Y G    K ER+
Sbjct: 250 FGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSERE 309

Query: 195 TEINKSK------------FTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
            E+ KS               N+YVKNL +   ++ L+  F  +GTITS+ VMRD  G S
Sbjct: 310 AELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVS 369

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKE 298
           + FGFV + + D+A +AV  +NGK    K  YV  AQ+K  R   L+ Q  Q  ++
Sbjct: 370 RGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQQ 425


>sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida
           glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
           0622 / NRRL Y-65) GN=PAB1 PE=3 SV=1
          Length = 579

 Score =  426 bits (1095), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/377 (54%), Positives = 282/377 (74%), Gaps = 2/377 (0%)

Query: 17  NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQ 76
           N ++  + SLYVGDL+ +V+++ LYD+F+ +G V S+RVCRD  T+ SLGY YVNF++  
Sbjct: 28  NQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHD 87

Query: 77  EAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 136
            A  A+E LNFTP+ GK  R+M+S RDPSLRK GAGNIFIKNL   ID+KAL+DTFS FG
Sbjct: 88  AAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFG 147

Query: 137 NILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTE 196
           NILS KVATD  G+SKG+G+V F+ +ESA +AI+ LNGMLLN +++YVG  L K+ER+++
Sbjct: 148 NILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESK 207

Query: 197 IN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSD 254
               K+ FTNVY+KN++  TT+++ ++   ++G   S V+ R  +G++K FGFVNF N +
Sbjct: 208 FEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHE 267

Query: 255 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLD 314
           DA + VE LN  +F  +  YV +AQKK ER+ ELK Q+E    E   K+QG NL+IKNLD
Sbjct: 268 DAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLD 327

Query: 315 DSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSK 374
           DSIDD+KL++ F+P+G+ITS KVM   +G S+G GFV FSTPEEA++A+ E N ++V  K
Sbjct: 328 DSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGK 387

Query: 375 PLYVALAQRKEDRRARL 391
           PLYVA+AQRK+ RR++L
Sbjct: 388 PLYVAIAQRKDVRRSQL 404



 Score =  155 bits (392), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 152/286 (53%), Gaps = 21/286 (7%)

Query: 111 AGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAI 169
           + ++++ +LD ++    L+D FS  G + S +V  D +   S GY +V F++ ++A+ AI
Sbjct: 34  SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAI 93

Query: 170 EKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTI 229
           EKLN   +  K   +       +RD  + K    N+++KNL      + L  +F  +G I
Sbjct: 94  EKLNFTPIKGKLCRI----MWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNI 149

Query: 230 TSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSEREL--- 286
            S+ V  D  GKSK FG+V+FE  + A+ A++ALNG   + +E YVG    K ERE    
Sbjct: 150 LSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFE 209

Query: 287 ELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISR 346
           E+K  F              N+YIKN++    D++ ++L + FG   S  + R P G ++
Sbjct: 210 EMKANF-------------TNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENK 256

Query: 347 GSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           G GFV F   E+A + + E+N      +PLYV  AQ+K +R+  L+
Sbjct: 257 GFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELK 302



 Score =  151 bits (382), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 152/291 (52%), Gaps = 21/291 (7%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L  ++ +  LYD F+  G ++S +V  D  T +S G+GYV+F   + A+ A
Sbjct: 121 GAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEA 179

Query: 82  LEMLNFTPLNGKPIRVMYSHRDPSLR-------KSGAGNIFIKNLDKAIDHKALHDTFSA 134
           ++ LN   LNG+ I V   H     R       K+   N++IKN++     K   +  + 
Sbjct: 180 IDALNGMLLNGQEIYVG-PHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAK 238

Query: 135 FGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERD 194
           FG   S  +     G++KG+GFV F N E A K +E+LN      + +YV    +K ER 
Sbjct: 239 FGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQ 298

Query: 195 TEINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKS 242
            E+ K          +K+   N+++KNL +S  ++ L++ F  YGTITSA VM   +GKS
Sbjct: 299 QELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKS 358

Query: 243 KCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
           K FGFV F   ++A +A+   N +    K  YV  AQ+K  R  +L  Q +
Sbjct: 359 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 409



 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 29/231 (12%)

Query: 165 AQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTN--VYVKNLSESTTEEDLQKS 222
            +K  E+L  + L DKQ          E   E N+S+  +  +YV +L  S +E  L   
Sbjct: 5   TEKTAEQLENLSLQDKQ----------EGTNEENQSETVSASLYVGDLDPSVSEAHLYDI 54

Query: 223 FGEYGTITSAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKK 281
           F   G ++S  V RD   K+   + +VNF + D A  A+E LN      K   +      
Sbjct: 55  FSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRI----MW 110

Query: 282 SERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP 341
           S+R+  L+            K    N++IKNL   ID++ L   FS FG+I S KV  D 
Sbjct: 111 SQRDPSLR------------KKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE 158

Query: 342 SGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           +G S+G G+V F   E AS A+  +NG ++  + +YV     K++R ++ +
Sbjct: 159 TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFE 209



 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 25  SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEM 84
           +L++ +L+ ++ D +L + F   G + S +V       +S G+G+V FS  +EA +A+  
Sbjct: 320 NLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMT-TENGKSKGFGFVCFSTPEEATKAITE 378

Query: 85  LNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKN 118
            N   + GKP+ V  + R    R   A  I  +N
Sbjct: 379 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 412


>sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
           6054 / NBRC 10063 / NRRL Y-11545) GN=PAB1 PE=3 SV=1
          Length = 632

 Score =  422 bits (1086), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/372 (55%), Positives = 282/372 (75%), Gaps = 2/372 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           T SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  +++SLGY YVN+   ++  +A+
Sbjct: 51  TASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAI 110

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN++P+ G+P R+M+S RDPS R+SG GNIFIKNL  AID+KALHDTFS FG ILSCK
Sbjct: 111 EELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCK 170

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VATD  GQSK +GFV ++  E+A+ AIE +NGMLLND++V+VG  + K++R+++    K+
Sbjct: 171 VATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKA 230

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTN+YVKN+    +EEDL+K F  YG ITS  + +D +GKSK FGFVN+E  + A +AV
Sbjct: 231 NFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAV 290

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           E LN K+ + ++ YVG+AQKK ER  ELK Q+E    E   K+QG NL+IKNLDD+ID E
Sbjct: 291 EELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSE 350

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           KL++ F PFG+ITS +VM D +G S+G GFV FS+PEEA++A+ EMN +M   KPLYVAL
Sbjct: 351 KLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVAL 410

Query: 381 AQRKEDRRARLQ 392
           AQRK+ RR++L+
Sbjct: 411 AQRKDVRRSQLE 422



 Score =  151 bits (382), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 19/296 (6%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A + G  ++++ +L   + +  L+D F+  G+++S +V  D    +S  +G+V++  A
Sbjct: 132 PSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETA 190

Query: 76  QEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALH 129
           + A  A+E +N   LN + + V    S +D   +    K+   NI++KN+D     + L 
Sbjct: 191 EAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLK 250

Query: 130 DTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLR 189
             F+ +G I S  +  D  G+SKG+GFV ++  E+A KA+E+LN   +N +++YVG   +
Sbjct: 251 KLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQK 310

Query: 190 KQERDTEINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRD 237
           K+ER  E+ K          SK+   N+++KNL ++   E L++ F  +GTITSA VM D
Sbjct: 311 KRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVD 370

Query: 238 GDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
             GKSK FGFV F + ++A +A+  +N + F  K  YV  AQ+K  R  +L+ Q +
Sbjct: 371 ETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKDVRRSQLEQQIQ 426


>sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida
           albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3
           SV=1
          Length = 629

 Score =  420 bits (1079), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 283/372 (76%), Gaps = 2/372 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  +++SLGY YVN+   ++  +A+
Sbjct: 51  SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAI 110

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+ P+ G+P R+M+S RDPS R+SG GNIFIKNL  AID+KALHDTFSAFG ILSCK
Sbjct: 111 EELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCK 170

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VATD  GQSK +GFV ++  E+A+ AIE +NGMLLND++V+VG  + K++R+++    K+
Sbjct: 171 VATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKA 230

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTN+YVKN+  + +EE  +K F  +G ITS  + +D DGKSK FGFVNFE+ + A +AV
Sbjct: 231 NFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAV 290

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           E LN K+ + ++ YVG+AQKK ER  ELK Q+E    E   K+QG NL++KNLDD+ID E
Sbjct: 291 EELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSE 350

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           KL++ F PFG+ITS KVM D +G S+G GFV F+TPEEA++A+ EMN +M+  KPLYVAL
Sbjct: 351 KLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVAL 410

Query: 381 AQRKEDRRARLQ 392
           AQRK+ RR++L+
Sbjct: 411 AQRKDVRRSQLE 422



 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 168/296 (56%), Gaps = 19/296 (6%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            +A + G  ++++ +L   + +  L+D F+  G+++S +V  D    +S  +G+V++  A
Sbjct: 132 PSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EFGQSKCFGFVHYETA 190

Query: 76  QEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALH 129
           + A  A+E +N   LN + + V    S +D   +    K+   NI++KN+D     ++  
Sbjct: 191 EAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFE 250

Query: 130 DTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLR 189
             FS FG I S  +  D +G+SKG+GFV F++ ESA KA+E+LN   +N +++YVG   +
Sbjct: 251 KLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQK 310

Query: 190 KQERDTEINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRD 237
           K+ER  E+ K          +K+   N++VKNL ++   E L++ F  +GTITSA VM D
Sbjct: 311 KRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVD 370

Query: 238 GDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
             GKSK FGFV F   ++A +A+  +N +  + K  YV  AQ+K  R  +L+ Q +
Sbjct: 371 EAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVRRSQLEQQIQ 426


>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia
           lipolytica (strain CLIB 122 / E 150) GN=PAB1 PE=3 SV=1
          Length = 629

 Score =  419 bits (1076), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/393 (51%), Positives = 287/393 (73%), Gaps = 2/393 (0%)

Query: 2   AQVQAQGQNVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLST 61
           A+ +A+ ++    G+  +Q    SLYVG+L+ +VT++ L+++FN +G V SVRVCRD  T
Sbjct: 24  AEGEAKTESSEEKGSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAIT 83

Query: 62  RRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDK 121
           RRSLGY YVNF N  +  RALE LN++P+  +P R+M+S RDP+LRK+GAGNI+IKNLD 
Sbjct: 84  RRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDP 143

Query: 122 AIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQ 181
           AID+KALHDTFSAFG ILSCK+ATD  G S+G+GFV +++ ESA+ AI+ +NGMLLNDK+
Sbjct: 144 AIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKK 203

Query: 182 VYVGHFLRKQER--DTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGD 239
           V+VG  + K +R    E  K+ FTNV++KNL    TE + ++   ++G  +S  +  + +
Sbjct: 204 VFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDE 263

Query: 240 GKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEA 299
           GK   FGFV+++  D A +A++ L+  +F   + + G+A+KK ER  EL+ Q+E +  E 
Sbjct: 264 GKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEK 323

Query: 300 ADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEA 359
            +K+QG NLYIKNLDD+IDD+KL+  F+P G+ITS KVM D +G S+G GFV +S+PEEA
Sbjct: 324 LNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEA 383

Query: 360 SRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           ++A+ EMN ++V  KPLYV LAQRK+ RR++LQ
Sbjct: 384 TKAVTEMNHRLVAGKPLYVVLAQRKDVRRSQLQ 416



 Score =  142 bits (359), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 153/290 (52%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++Y+ +L+  + +  L+D F+  GQ++S ++  D     S G+G+V++ +A+ A  A
Sbjct: 132 GAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATD-EFGNSRGFGFVHYESAESAESA 190

Query: 82  LEMLNFTPLNGKPI----RVMYSHRDPSL--RKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LN K +     V  S R  S   +K+   N+FIKNL   I      +  + F
Sbjct: 191 IQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKF 250

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G   S  ++T+  G+  G+GFV +   + A KAI+ L+       +++ G   +K ER  
Sbjct: 251 GETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERAD 310

Query: 196 EI------------NKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+            NK +  N+Y+KNL ++  ++ L+  F  +GTITSA VM D  GKSK
Sbjct: 311 ELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSK 370

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV + + ++A +AV  +N +    K  YV  AQ+K  R  +L+ Q +
Sbjct: 371 GFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRKDVRRSQLQQQIQ 420


>sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
           JCM 1990 / NBRC 0083 / IGC 2968) GN=PAB1 PE=3 SV=2
          Length = 627

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/372 (55%), Positives = 282/372 (75%), Gaps = 2/372 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  T++SLGY YVNF   ++  +A+
Sbjct: 50  SASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAI 109

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN++ + G+P R+M+S RDPSLR++G GNIFIKNL  AID+KALHDTF+AFG ILSCK
Sbjct: 110 EDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKILSCK 169

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VATD  G SK +GFV ++  E+A+ AIE +NGMLLND++VYVG  + K++R+++    K+
Sbjct: 170 VATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKA 229

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTNVY KN+    +EE+ +K F  YG ITS  + +D +GKSK FGFVNFEN + A +AV
Sbjct: 230 NFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAV 289

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LN K+ + ++ YVG+AQKK ER  ELK Q+E    E   K+QG NL+IKNLDD+ID E
Sbjct: 290 DELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSE 349

Query: 321 KLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVAL 380
           KL++ F PFGSITS +VM D +G S+G GFV FS+PEEA++A+ EMN +M+  KPLYVAL
Sbjct: 350 KLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVAL 409

Query: 381 AQRKEDRRARLQ 392
           AQRK+ RR++L+
Sbjct: 410 AQRKDVRRSQLE 421



 Score =  146 bits (369), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 160/290 (55%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L   + +  L+D F   G+++S +V  D     S  +G+V++  A+ A  A
Sbjct: 137 GDGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATD-DMGISKCFGFVHYETAEAAEAA 195

Query: 82  LEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V    S +D   +    K+   N++ KN+D     +     F A+
Sbjct: 196 IENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAY 255

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G I S  +  D  G+SKG+GFV F+N ESA KA+++LN   +N +++YVG   +K+ER  
Sbjct: 256 GKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLE 315

Query: 196 EINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+ K          SK+   N+++KNL ++   E L++ F  +G+ITSA VM D  GKSK
Sbjct: 316 ELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSK 375

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV F + ++A +A+  +N +    K  YV  AQ+K  R  +L+ Q +
Sbjct: 376 GFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDVRRSQLEQQIQ 425



 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)

Query: 297 KEAADKFQ----GANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDP-SGISRGSGFV 351
           +EAAD  Q     A+LY+  L+ S+++  L ++FSP G + S +V RD  +  S G  +V
Sbjct: 38  EEAADSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYV 97

Query: 352 AFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRR 388
            F   E+  +A+ ++N  ++  +P  +  +QR    R
Sbjct: 98  NFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLR 134


>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566
           / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1
           PE=3 SV=2
          Length = 631

 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/369 (54%), Positives = 277/369 (75%), Gaps = 2/369 (0%)

Query: 26  LYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEML 85
           LYVG+L  +V ++ L+++F+ +GQV S+RVCRD  T++SLGY YVNF    + +RA+E L
Sbjct: 60  LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119

Query: 86  NFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAT 145
           N++ ++G+P R+M+S RDPSLR++G GNIFIKNL  AID+KALHDTFSAFG ILSCKVAT
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179

Query: 146 DLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KSKFT 203
           D  GQSK +GFV ++  E+A+ AIE +NGMLLND++V+VG  + K++R+++    K+ FT
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239

Query: 204 NVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEAL 263
           NVYVKNL+        ++ F  +G +TS  +  D +GKS+ FGFVNFEN + A  AV+ +
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299

Query: 264 NGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLK 323
           N K+ D ++ YVG+AQKK ER  ELK  +E    E   K+QG NL++KNLDDSID EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLE 359

Query: 324 QLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQR 383
           + F PFG+ITS +VM D +G S+G GFV FS+PEEA++A+ EMN +M+  KPLYVALAQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419

Query: 384 KEDRRARLQ 392
           K+ RR++L+
Sbjct: 420 KDVRRSQLE 428



 Score =  153 bits (386), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 164/290 (56%), Gaps = 19/290 (6%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L   + +  L+D F+  G+++S +V  D    +S  +G+V++  A+ A  A
Sbjct: 144 GDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAA 202

Query: 82  LEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAF 135
           +E +N   LN + + V    S RD   +    K+   N+++KNL   +D+    + F  F
Sbjct: 203 IENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPF 262

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G + S  + TD  G+S+G+GFV F+N ESA  A++++N   ++ +++YVG   +K+ER  
Sbjct: 263 GPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLD 322

Query: 196 EINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+ +          SK+   N++VKNL +S   E L++ F  +GTITSA VM D  GKSK
Sbjct: 323 ELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSK 382

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFE 293
            FGFV F + ++A +A+  +N +    K  YV  AQ+K  R  +L+ Q +
Sbjct: 383 GFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVRRSQLEQQIQ 432


>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
           GN=pab1 PE=3 SV=1
          Length = 765

 Score =  402 bits (1034), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/327 (57%), Positives = 250/327 (76%), Gaps = 2/327 (0%)

Query: 16  ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNA 75
            NA+Q  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N 
Sbjct: 41  PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100

Query: 76  QEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAF 135
            +  RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AF
Sbjct: 101 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAF 160

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           GNILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R +
Sbjct: 161 GNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQS 220

Query: 196 EIN--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENS 253
           +    K+ FTNVY+KN+ +  TEE+ ++ F ++G ITSA + RD +GKS+ FGFVNF   
Sbjct: 221 KFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTH 280

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNL 313
           + A  AV+ +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL
Sbjct: 281 ESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNL 340

Query: 314 DDSIDDEKLKQLFSPFGSITSCKVMRD 340
            D +DDEKL++LF P+G+ITS KVMRD
Sbjct: 341 TDDVDDEKLRELFGPYGTITSAKVMRD 367



 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 204/392 (52%), Gaps = 62/392 (15%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L++ + +  L+D F   G ++S +V +D     S GYG+V++  A+ A  A
Sbjct: 135 GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNA 193

Query: 82  LEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAF 135
           ++ +N   LN K + V +  S +D   +    K+   N++IKN+D+ +  +   + F  F
Sbjct: 194 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKF 253

Query: 136 GNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDT 195
           G I S  ++ D  G+S+G+GFV F   ESAQ A++++N   +  +++YVG   +K ER+ 
Sbjct: 254 GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREE 313

Query: 196 EINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSK 243
           E+ K          SK+   N+YVKNL++   +E L++ FG YGTITSA VMRD      
Sbjct: 314 ELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD------ 367

Query: 244 CFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKF 303
                N E +                DKE    +A K++E+E     + E+  ++ AD  
Sbjct: 368 ----TNIERTQTPE-----------SDKEKENKEATKENEKESSEAEKAEKTEEKPADS- 411

Query: 304 QGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRAL 363
            G            D + L                    G S+G GFV FS+P+EAS+A+
Sbjct: 412 -GDEKKEDKESKKADKKGL--------------------GKSKGFGFVCFSSPDEASKAV 450

Query: 364 LEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
            EMN +MV  KPLYVALAQRK+ RR++L+  +
Sbjct: 451 TEMNQRMVNGKPLYVALAQRKDVRRSQLEASI 482



 Score =  165 bits (417), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 163/302 (53%), Gaps = 21/302 (6%)

Query: 95  IRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKG 153
           +  + S   P+  +  + ++++  LD ++    L++ FS+ G + S +V  D +  +S G
Sbjct: 32  VTAVESTTAPNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 91

Query: 154 YGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSES 213
           Y +V ++N    ++A+E LN  L+  K   +       +RD  + K+   NV++KNL  +
Sbjct: 92  YAYVNYNNTADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSA 147

Query: 214 TTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEW 273
              + L  +F  +G I S  V +D  G SK +GFV++E ++ A  A++ +NG   +DK+ 
Sbjct: 148 IDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 207

Query: 274 YVGKAQKKSEREL---ELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFG 330
           +VG    K +R+    E+K  F              N+YIKN+D  + +E+ ++LF  FG
Sbjct: 208 FVGHHISKKDRQSKFEEMKANF-------------TNVYIKNIDQDVTEEEFRELFEKFG 254

Query: 331 SITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRAR 390
            ITS  + RD  G SRG GFV FST E A  A+ EMN K + ++ LYV  AQ+K +R   
Sbjct: 255 EITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEE 314

Query: 391 LQ 392
           L+
Sbjct: 315 LR 316



 Score = 36.2 bits (82), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRS 64
           A+++   +LYV +L  +V D +L +LF   G + S +V RD +  R+
Sbjct: 327 ASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDTNIERT 373


>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=pab1 PE=3 SV=1
          Length = 731

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/325 (57%), Positives = 247/325 (76%), Gaps = 2/325 (0%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQE 77
           ANQ  + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD  TRRSLGY YVN++N  +
Sbjct: 48  ANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTAD 107

Query: 78  AARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGN 137
             RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGN
Sbjct: 108 GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGN 167

Query: 138 ILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI 197
           ILSCKVA D  G SKGYGFV ++  E+A  AI+ +NGMLLNDK+V+VGH + K++R ++ 
Sbjct: 168 ILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKF 227

Query: 198 N--KSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDD 255
              K+ FTNVY+KNL     +++ +K F ++G ITSA + RD +GKS+ FGFVNF   + 
Sbjct: 228 EEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHES 287

Query: 256 AARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDD 315
           A  AVE +N K+   ++ YVG+AQKK ERE EL+ Q+E    E A K+QG NLY+KNL D
Sbjct: 288 AQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTD 347

Query: 316 SIDDEKLKQLFSPFGSITSCKVMRD 340
            IDDEKL++LF P+G+ITS KVMRD
Sbjct: 348 DIDDEKLRELFGPYGTITSAKVMRD 372



 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 161/293 (54%), Gaps = 21/293 (7%)

Query: 104 PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNE 162
           P+  +  + ++++  LD ++    L++ FS+ G + S +V  D +  +S GY +V ++N 
Sbjct: 46  PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105

Query: 163 ESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKS 222
              ++A+E LN  L+  K   +       +RD  + K+   NV++KNL  +   + L  +
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDT 161

Query: 223 FGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKS 282
           F  +G I S  V +D  G SK +GFV++E ++ A  A++ +NG   +DK+ +VG    K 
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221

Query: 283 EREL---ELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMR 339
           +R+    E+K  F              N+YIKNLD  IDD++ +++F  FG ITS  + R
Sbjct: 222 DRQSKFEEMKANF-------------TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSR 268

Query: 340 DPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           D  G SRG GFV FST E A  A+ EMN K + S+ LYV  AQ+K +R   L+
Sbjct: 269 DQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELR 321



 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 45/57 (78%)

Query: 339 RDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
           + P G S+G GFV FS+P+EAS+A+ EMN +MV  KPLYVALAQRK+ RR++L+  +
Sbjct: 428 KKPFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASI 484



 Score = 35.8 bits (81), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 27/40 (67%)

Query: 63  RSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR 102
           +S G+G+V FS+  EA++A+  +N   +NGKP+ V  + R
Sbjct: 433 KSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQR 472



 Score = 35.0 bits (79), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 27/46 (58%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRR 63
           A+++   +LYV +L  ++ D +L +LF   G + S +V RD +  R
Sbjct: 332 ASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTNVER 377


>sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
           FGSC 8958) GN=PAB1 PE=3 SV=1
          Length = 762

 Score =  396 bits (1017), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/321 (57%), Positives = 252/321 (78%), Gaps = 3/321 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD  TRRSLGY YVN++   +  +AL
Sbjct: 60  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+T + G+P R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 179

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D NG SKGYGFV ++ +E+A +AI+ +NGMLLN+K+VYVGH + K++R ++ +  K+
Sbjct: 180 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKA 239

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGD-GKSKCFGFVNFENSDDAARA 259
            FTN+YVKN++   T+++ +  F +YG +TS+ + RD + GKS+ FGFVNF + +DA++A
Sbjct: 240 NFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299

Query: 260 VEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDD 319
           V+ LN K+F  +  YVG+AQKK ERE EL+  +E   +E A K+QG NLYIKNLDD +DD
Sbjct: 300 VQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDD 359

Query: 320 EKLKQLFSPFGSITSCKVMRD 340
           EKL+QLFS FG ITS KVMRD
Sbjct: 360 EKLRQLFSEFGPITSAKVMRD 380



 Score =  151 bits (382), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 159/287 (55%), Gaps = 22/287 (7%)

Query: 111 AGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAI 169
           + ++++  LD ++    L + FS  G++ S +V  D +  +S GY +V ++     +KA+
Sbjct: 60  SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119

Query: 170 EKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTI 229
           E+LN  L+  +   +       +RD  + K+   NV++KNL  +   + L  +F  +G I
Sbjct: 120 EELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNI 175

Query: 230 TSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSEREL--- 286
            S  V +D +G SK +GFV++E  + A++A++ +NG   ++K+ YVG    K +R+    
Sbjct: 176 LSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFD 235

Query: 287 ELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRD-PSGIS 345
           E+K  F              N+Y+KN++  + D++ + LF  +G +TS  + RD  +G S
Sbjct: 236 EMKANF-------------TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKS 282

Query: 346 RGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           RG GFV F++ E+AS+A+ E+N K    + LYV  AQ+K +R   L+
Sbjct: 283 RGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELR 329



 Score =  137 bits (344), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 75/344 (21%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+  + +  L+D F   G ++S +V +D     S GYG+V++   + A++A
Sbjct: 147 GQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQA 205

Query: 82  LEMLNFTPLNGKPIRVMYSHRDPSL--------RKSGAGNIFIKNLDKAIDHKALHDTFS 133
           ++ +N   LN K  +V   H  P           K+   NI++KN++  +        F 
Sbjct: 206 IKHVNGMLLNEK--KVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFE 263

Query: 134 AFGNILSCKVATDL-NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQE 192
            +G++ S  +A D   G+S+G+GFV F + E A KA+++LN    + + +YVG   +K E
Sbjct: 264 KYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHE 323

Query: 193 RDTEINKS------------KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDG-- 238
           R+ E+ KS            +  N+Y+KNL +   +E L++ F E+G ITSA VMRD   
Sbjct: 324 REEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSIT 383

Query: 239 ----------------------------DGKSK-----------------CFGFVNFENS 253
                                       D K +                  FGFV F N 
Sbjct: 384 EPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANP 443

Query: 254 DDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMK 297
           DDA +AV  +N +  ++K  YV  AQ+K  R    K+Q EQ+++
Sbjct: 444 DDATKAVAEMNQRMVNNKPLYVALAQRKDVR----KNQLEQSIQ 483



 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query: 349 GFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
           GFV F+ P++A++A+ EMN +MV +KPLYVALAQRK+ R+ +L+  +
Sbjct: 436 GFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQLEQSI 482



 Score = 34.7 bits (78), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 46/131 (35%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTR--------------- 62
           A+++   +LY+ +L+  V D +L  LF++ G + S +V RD  T                
Sbjct: 340 ASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEK 399

Query: 63  -------------------------------RSLGYGYVNFSNAQEAARALEMLNFTPLN 91
                                          +S G+G+V F+N  +A +A+  +N   +N
Sbjct: 400 NKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVN 459

Query: 92  GKPIRVMYSHR 102
            KP+ V  + R
Sbjct: 460 NKPLYVALAQR 470


>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
           OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
           FGSC 10173) GN=PAB1 PE=3 SV=3
          Length = 744

 Score =  382 bits (982), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/318 (56%), Positives = 245/318 (77%), Gaps = 2/318 (0%)

Query: 23  TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARAL 82
           + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD  TRRSLGY YVN++++++  +AL
Sbjct: 47  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106

Query: 83  EMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 142
           E LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCK
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCK 166

Query: 143 VATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEIN--KS 200
           VA D  G SKGYGFV ++  E+A  AI+ +NGMLLN+K+V+VGH + K+ER ++    K+
Sbjct: 167 VAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKA 226

Query: 201 KFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAV 260
            FTN+YVKN+    T+ED ++ F ++G ITSA + RD  GKS+ FGFVN+   + AA AV
Sbjct: 227 NFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAV 286

Query: 261 EALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDE 320
           + LN  +F  ++ YVG+AQKK ERE EL+ Q+E    E   K+QG NLYIKNL+D +DDE
Sbjct: 287 DHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDE 346

Query: 321 KLKQLFSPFGSITSCKVM 338
           KL+ +F+PFG+ITS KV+
Sbjct: 347 KLRDMFTPFGTITSAKVI 364



 Score =  145 bits (367), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 151/283 (53%), Gaps = 15/283 (5%)

Query: 111 AGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAI 169
           + ++++  LD ++    L + FS+ G + S +V  D +  +S GY +V +++ E  +KA+
Sbjct: 47  SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106

Query: 170 EKLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTI 229
           E+LN  ++  K   +       +RD  + K+   NV++KNL  +   + L  +F  +G I
Sbjct: 107 EELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNI 162

Query: 230 TSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELK 289
            S  V +D  G SK +GFV++E ++ A  A++ +NG   ++K+ +VG    K ER     
Sbjct: 163 LSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKER----M 218

Query: 290 HQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSG 349
            +FE+       K    N+Y+KN+D  + DE  ++LF   G ITS  + RD  G SRG G
Sbjct: 219 SKFEEM------KANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFG 272

Query: 350 FVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQ 392
           FV +   E A+ A+  +N      + LYV  AQ+K +R   L+
Sbjct: 273 FVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELR 315



 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 76/341 (22%)

Query: 22  GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARA 81
           G  ++++ +L+  + +  L+D F   G ++S +V +D     S GYG+V++  A+ A  A
Sbjct: 134 GQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNA 192

Query: 82  LEMLNFTPLNGKPIRVMYSHRDPSLR--------KSGAGNIFIKNLDKAIDHKALHDTFS 133
           ++ +N   LN K  +V   H  P           K+   NI++KN+D  +  +   + F 
Sbjct: 193 IKHVNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFE 250

Query: 134 AFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQER 193
             G+I S  +A D  G+S+G+GFV +   E+A  A++ LN +    +++YVG   +K ER
Sbjct: 251 KHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHER 310

Query: 194 DTEINK----------SKF--TNVYVKNLSESTTEEDLQKSFGEYGTITSA-VVMRD--- 237
           + E+ K          SK+   N+Y+KNL++   +E L+  F  +GTITSA V++RD   
Sbjct: 311 EEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEK 370

Query: 238 --------------------------------------GD-----------GKSKCFGFV 248
                                                 GD           GKSK FGFV
Sbjct: 371 KDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFV 430

Query: 249 NFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELK 289
            F N D+A +AV  +N K  + K  YV  AQ+K  R+ +L+
Sbjct: 431 CFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLE 471



 Score = 66.6 bits (161), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 41/53 (77%)

Query: 343 GISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCL 395
           G S+G GFV FS P+EA++A+ EMN KM+  KPLYVALAQRK+ R+ +L+  +
Sbjct: 422 GKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLEATI 474


>sp|P0CB38|PAB4L_HUMAN Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L
           PE=2 SV=1
          Length = 370

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/368 (51%), Positives = 260/368 (70%), Gaps = 4/368 (1%)

Query: 18  ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQE 77
           A ++   SLYVGDL A+VT+  L+  F+ +G V+S+R+CRD  TRRSLGY YVNF    +
Sbjct: 4   AAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLAD 63

Query: 78  AARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGN 137
           A +AL+ +NF  + GK IR+M+S RD  LR+SG GN+FIKNLDK+ID+K L++ FSAFG 
Sbjct: 64  AQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGK 123

Query: 138 ILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI 197
           ILS KV +D  G SKGY FV F N+ +A +AIE++NG LL   +V+VG F  +++R+ E+
Sbjct: 124 ILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 182

Query: 198 NK--SKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDD 255
               S+FTNVY+KN      +E L+  F +YG   S  VM D  GKSK FGFV+F++ + 
Sbjct: 183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEA 242

Query: 256 AARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDD 315
           A +AVE +NG+  + +  +VG+AQKK ER+ ELK  FEQ  +E     QG  LYIKNLDD
Sbjct: 243 AKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDD 302

Query: 316 SIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKP 375
           +IDDEKL+  FS FGSI+  KVM++  G S+G G + FS+PE+A++A+ EMNG+++ SKP
Sbjct: 303 TIDDEKLRNEFSSFGSISRVKVMQEE-GQSKGFGLICFSSPEDATKAMTEMNGRILGSKP 361

Query: 376 LYVALAQR 383
           L +ALAQR
Sbjct: 362 LSIALAQR 369



 Score =  163 bits (413), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 162/289 (56%), Gaps = 16/289 (5%)

Query: 112 GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD-LNGQSKGYGFVQFDNEESAQKAIE 170
            ++++ +L   +    L   FS  G +LS ++  D +  +S GY +V F     AQKA++
Sbjct: 10  ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 69

Query: 171 KLNGMLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTIT 230
            +N  ++  K +     L   +RD  + +S   NV++KNL +S   + L + F  +G I 
Sbjct: 70  TMNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 125

Query: 231 SAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKH 290
           S+ VM D  G SK + FV+F+N   A RA+E +NGK     + +VG+ + + +RE EL+ 
Sbjct: 126 SSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRS 184

Query: 291 QFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGF 350
           +        A +F   N+YIKN    +DDE+LK +FS +G   S KVM D SG S+G GF
Sbjct: 185 K--------ASEF--TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGF 234

Query: 351 VAFSTPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRARLQVCLLQCR 399
           V+F + E A +A+ EMNG+ +  + ++V  AQ+K +R+A L+    Q +
Sbjct: 235 VSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283


>sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis
           thaliana GN=At2g36660 PE=3 SV=1
          Length = 609

 Score =  359 bits (921), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 182/393 (46%), Positives = 266/393 (67%), Gaps = 2/393 (0%)

Query: 1   MAQVQAQGQNVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLS 60
           MA V A     +   + ++   T SLYVGDL  +VT+  LYD F +   + SVR+C+D S
Sbjct: 1   MATVHAALHAADASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDAS 60

Query: 61  TRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLD 120
           + RSL YGY NF + Q+A  A+E  N + LNGK IRVM+S R P  R++G GN+F+KNL 
Sbjct: 61  SGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLP 120

Query: 121 KAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDK 180
           +++ +  L D F  FGNI+SCKVAT  +G+S+GYGFVQF+ E++A  AI+ LN  ++ DK
Sbjct: 121 ESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADK 180

Query: 181 QVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDG 240
           ++YVG F++K +R     + K+TN+Y+KNL    +E+ L++ F E+G I S  + +D + 
Sbjct: 181 EIYVGKFMKKTDRVKP--EEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENR 238

Query: 241 KSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAA 300
             + + FVNF+N +DA RA E +NG KF  K  YVG+AQKK+ERE  L+ QF++  +E  
Sbjct: 239 LCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQK 298

Query: 301 DKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEAS 360
              + +N+Y+KN++ ++ +E+L++ FS  G+ITS K+M D  G S+G GFV FSTPEEA 
Sbjct: 299 MIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAI 358

Query: 361 RALLEMNGKMVVSKPLYVALAQRKEDRRARLQV 393
            A+   +G+M   KPLYVA+AQ+KEDR+ +LQV
Sbjct: 359 DAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQV 391



 Score =  180 bits (456), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 163/292 (55%), Gaps = 15/292 (5%)

Query: 15  GANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSN 74
             +A + G  +++V +L  +VT++ L D+F + G +VS +V   L   +S GYG+V F  
Sbjct: 103 APDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQ 161

Query: 75  AQEAARALEMLNFTPLNGKPIRV--MYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTF 132
              A  A++ LN T +  K I V       D    +    N+++KNLD  +    L + F
Sbjct: 162 EDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKF 221

Query: 133 SAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQE 192
           + FG I+S  +A D N   +GY FV FDN E A++A E +NG     K +YVG   +K E
Sbjct: 222 AEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAE 281

Query: 193 RDTEINK------------SKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDG 240
           R+  + +            +K +N+YVKN++ + TEE+L+K F + GTITS  +M D  G
Sbjct: 282 REQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKG 341

Query: 241 KSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQF 292
           KSK FGFV F   ++A  AV+  +G+ F  K  YV  AQKK +R+++L+ QF
Sbjct: 342 KSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQF 393


>sp|Q7JGR2|PABP5_MACMU Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 185/358 (51%), Positives = 243/358 (67%), Gaps = 5/358 (1%)

Query: 28  VGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNF 87
           VGDL+ +VT+  LY  F   G +   R+CRD  TR  LGYGYVNF    +A  AL  +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 88  TPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL 147
             +NGKP R+M+S  D  LRKSG GNIFIKNLDK+ID++AL   FSAFGNILSCKV  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 148 NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI---NKSKFTN 204
           NG SKGY +V FD+  +A +AI  +NG+ LN++QVYVG F   +ER  E+   +++ FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200

Query: 205 VYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALN 264
           V+VKN+ +   +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

Query: 265 GKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQ 324
           GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK+
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320

Query: 325 LFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
            FS FGSI+  KVM +  G  +G G V FS+ EEA++A+ EMNG++V SKPL+V L Q
Sbjct: 321 EFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377



 Score =  148 bits (373), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 15/275 (5%)

Query: 116 IKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSK-GYGFVQFDNEESAQKAIEKLNG 174
           + +LD  +    L+  F   G +   ++  D   +S  GYG+V F     A+ A+  +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 175 MLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVV 234
            L+N K       L   + D  + KS   N+++KNL +S     L   F  +G I S  V
Sbjct: 82  DLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 235 MRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQ 294
           + D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +   
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193

Query: 295 NMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFS 354
                 D+    N+++KN+ D IDDEKLK+LF  +G   S KV+RD SG S+G GFV + 
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 355 TPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRA 389
           T E A +A+L+++GK +  K LYV  AQ+K +R A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282


>sp|P60050|PABP5_PONPY Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 185/358 (51%), Positives = 243/358 (67%), Gaps = 5/358 (1%)

Query: 28  VGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNF 87
           VGDL+ +VT+  LY  F   G +   R+CRD  TR  LGYGYVNF    +A  AL  +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 88  TPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL 147
             +NGKP R+M+S  D  LRKSG GNIFIKNLDK+ID++AL   FSAFGNILSCKV  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 148 NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI---NKSKFTN 204
           NG SKGY +V FD+  +A +AI  +NG+ LN++QVYVG F   +ER  E+   +++ FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200

Query: 205 VYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALN 264
           V+VKN+ +   +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

Query: 265 GKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQ 324
           GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK+
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320

Query: 325 LFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
            FS FGSI+  KVM +  G  +G G V FS+ EEA++A+ EMNG++V SKPL+V L Q
Sbjct: 321 EFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  148 bits (373), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 15/275 (5%)

Query: 116 IKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSK-GYGFVQFDNEESAQKAIEKLNG 174
           + +LD  +    L+  F   G +   ++  D   +S  GYG+V F     A+ A+  +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 175 MLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVV 234
            L+N K       L   + D  + KS   N+++KNL +S     L   F  +G I S  V
Sbjct: 82  DLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 235 MRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQ 294
           + D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +   
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193

Query: 295 NMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFS 354
                 D+    N+++KN+ D IDDEKLK+LF  +G   S KV+RD SG S+G GFV + 
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 355 TPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRA 389
           T E A +A+L+++GK +  K LYV  AQ+K +R A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282


>sp|P60049|PABP5_PANTR Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 185/358 (51%), Positives = 243/358 (67%), Gaps = 5/358 (1%)

Query: 28  VGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNF 87
           VGDL+ +VT+  LY  F   G +   R+CRD  TR  LGYGYVNF    +A  AL  +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 88  TPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL 147
             +NGKP R+M+S  D  LRKSG GNIFIKNLDK+ID++AL   FSAFGNILSCKV  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 148 NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI---NKSKFTN 204
           NG SKGY +V FD+  +A +AI  +NG+ LN++QVYVG F   +ER  E+   +++ FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200

Query: 205 VYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALN 264
           V+VKN+ +   +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

Query: 265 GKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQ 324
           GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK+
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320

Query: 325 LFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
            FS FGSI+  KVM +  G  +G G V FS+ EEA++A+ EMNG++V SKPL+V L Q
Sbjct: 321 EFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  148 bits (373), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 15/275 (5%)

Query: 116 IKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSK-GYGFVQFDNEESAQKAIEKLNG 174
           + +LD  +    L+  F   G +   ++  D   +S  GYG+V F     A+ A+  +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 175 MLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVV 234
            L+N K       L   + D  + KS   N+++KNL +S     L   F  +G I S  V
Sbjct: 82  DLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 235 MRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQ 294
           + D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +   
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193

Query: 295 NMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFS 354
                 D+    N+++KN+ D IDDEKLK+LF  +G   S KV+RD SG S+G GFV + 
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 355 TPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRA 389
           T E A +A+L+++GK +  K LYV  AQ+K +R A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282


>sp|P60048|PABP5_HYLLA Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3
           SV=1
          Length = 382

 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 185/358 (51%), Positives = 243/358 (67%), Gaps = 5/358 (1%)

Query: 28  VGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNF 87
           VGDL+ +VT+  LY  F   G +   R+CRD  TR  LGYGYVNF    +A  AL  +NF
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 88  TPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL 147
             +NGKP R+M+S  D  LRKSG GNIFIKNLDK+ID++AL   FSAFGNILSCKV  D 
Sbjct: 82  DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141

Query: 148 NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFLRKQERDTEI---NKSKFTN 204
           NG SKGY +V FD+  +A +AI  +NG+ LN++QVYVG F   +ER  E+   +++ FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200

Query: 205 VYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDGKSKCFGFVNFENSDDAARAVEALN 264
           V+VKN+ +   +E L++ F EYG   S  V+RD  GKSK FGFV +E  + A +AV  L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260

Query: 265 GKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGANLYIKNLDDSIDDEKLKQ 324
           GK  D K  YVG+AQKK ER  EL+ +FE+   +   +  G  +YIKNLD++I+DEKLK+
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320

Query: 325 LFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVALAQ 382
            FS FGSI+  KVM +  G  +G G V FS+ EEA++A+ EMNG++V SKPL+V L Q
Sbjct: 321 EFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377



 Score =  148 bits (373), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 15/275 (5%)

Query: 116 IKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSK-GYGFVQFDNEESAQKAIEKLNG 174
           + +LD  +    L+  F   G +   ++  D   +S  GYG+V F     A+ A+  +N 
Sbjct: 22  VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81

Query: 175 MLLNDKQVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVV 234
            L+N K       L   + D  + KS   N+++KNL +S     L   F  +G I S  V
Sbjct: 82  DLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137

Query: 235 MRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQ 294
           + D +G SK + +V+F++   A RA+  +NG + ++++ YVG+ +   ER  E++ +   
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193

Query: 295 NMKEAADKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFS 354
                 D+    N+++KN+ D IDDEKLK+LF  +G   S KV+RD SG S+G GFV + 
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247

Query: 355 TPEEASRALLEMNGKMVVSKPLYVALAQRKEDRRA 389
           T E A +A+L+++GK +  K LYV  AQ+K +R A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,350,228
Number of Sequences: 539616
Number of extensions: 6028355
Number of successful extensions: 26034
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 18856
Number of HSP's gapped (non-prelim): 4150
length of query: 399
length of database: 191,569,459
effective HSP length: 120
effective length of query: 279
effective length of database: 126,815,539
effective search space: 35381535381
effective search space used: 35381535381
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)