BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015871
(399 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O42287|ITSN1_XENLA Intersectin-1 OS=Xenopus laevis GN=itsn1 PE=1 SV=1
Length = 1270
Score = 38.9 bits (89), Expect = 0.078, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 16 EELLQIETRCRELRKEKDTLRESQSQSFDLIKRLELHAKSLSEAHNEDKKHIQKL---ER 72
E L Q+E R + RKE++ + + + DL K+LE + + E +K I++ +R
Sbjct: 379 ERLAQLE-RAEQERKERERQDQERKRQQDLEKQLEKQRELERQREEERRKEIERREAAKR 437
Query: 73 ELMNCSQ---EIDYLQDQLNARN---EEVYSLSEHVHSLELKLVDMEILQDKVGQLEEEL 126
EL Q E + Q+ LN RN E++ L +LE +L E L DK QLE +L
Sbjct: 438 ELERQRQLEWERNRRQELLNQRNREQEDIVVLKAKKKTLEFEL---EALNDKKHQLEGKL 494
Query: 127 RRSDSECLLLMEELQSKEERLRNSALHIKKLEESISSSALESQCEIESLKIDMIALEQTC 186
+ D C L + E ++ L I ++ Q + MI +Q+
Sbjct: 495 Q--DIRCRLTTQR-HEIESTNKSRELRIAEITHLQQQLQESQQLLGK-----MIPEKQSL 546
Query: 187 VEAKKVHKENVQEKARMNSLIKELEVRTQDSQEIIECLDKENKELKEKLDSYETNGRVFC 246
++ K ++N + + +L + LE + Q++ + LD+ KE + KL + VF
Sbjct: 547 IDQLKQVQQNSLHRDSLLTLKRALETKEIGRQQLRDQLDEVEKETRAKLQEID----VFN 602
Query: 247 QKIEEW--------------MEKEDRKQLDIQSLVSELER 272
+++E E E KQ +++ SEL++
Sbjct: 603 NQLKELRELYNKQQFQKQQDFETEKIKQKELERKTSELDK 642
Score = 32.0 bits (71), Expect = 8.9, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 33 DTLRESQSQSF--DLIKRLELHAKSLSEAHNEDKKHIQKLERELMNCSQEIDYLQDQLNA 90
D L++ Q S D + L+ ++ + + + ++E+E QEID +QL
Sbjct: 548 DQLKQVQQNSLHRDSLLTLKRALETKEIGRQQLRDQLDEVEKETRAKLQEIDVFNNQLKE 607
Query: 91 RNEEVYSLSEHVHSL--ELKLVDMEILQDKVGQL----EEELRRSDSECLLLMEELQSKE 144
E+Y+ + E + + + L+ K +L EE+ RR + L + ++ +E
Sbjct: 608 L-RELYNKQQFQKQQDFETEKIKQKELERKTSELDKLKEEDKRRMLEQDKLWQDRVKQEE 666
Query: 145 ERLRNSALHIKKLEESISSSALESQCEIE 173
ER + +K EES+ +E + EI+
Sbjct: 667 ERYKFQDEEKEKREESVQKCEVEKKPEIQ 695
>sp|Q811U3|RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus
GN=Erc1 PE=1 SV=1
Length = 948
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 67 IQKLERELMNCSQEIDYLQDQLNARNEEVYSLSEHVHSLELKLVDMEILQDKVGQLEEEL 126
I +ER L + +EI L+ EE E + +E+ + +++K+GQ+++EL
Sbjct: 391 ISSMERGLRDLEEEIQMLKSNGALSTEER---EEEMKQMEVYRSHSKFMKNKIGQVKQEL 447
Query: 127 RRSDSECLLLMEELQSKEERLRNSALHIKKLEESISSSALES---QCEIESLKI 177
R D+E L L +L++ + +S HI+ L+ES+++ + Q E+++L++
Sbjct: 448 SRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRL 501
>sp|P43047|Y864_MYCCT Uncharacterized protein MCAP_0864 OS=Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC 27343 / NCTC
10154) GN=MCAP_0864 PE=4 SV=2
Length = 470
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 45 LIKRLELHAKSLSEAHNEDKKHIQKLERELMNCSQEIDYLQDQLNARNEEVYSLSEHVHS 104
++K ++ +L E N +K + + + EL+N +Q+I ++ Q+ N+E+ L E
Sbjct: 250 ILKDKQIQLSNLLEEINNNKTKLDQSDNELVNINQQIRDIESQIQNTNDEISKLKEEK-- 307
Query: 105 LELKLV----DMEILQDKVGQLEEELRRSDSECLLLMEELQSKEERLRNSALHIKKLEES 160
E+ LV D+ + ++V QLE + ++++ LL +++Q +++ S L+ + LE+
Sbjct: 308 -EMDLVKVKSDITKINEQVNQLETQSNQTNTNISLLRQQIQKLDKQKETSTLNTQTLEKE 366
Query: 161 ISSSALE-----SQCEIESLKIDMIALEQTCVEAK--KVHKENVQEKARMNSLIKELE 211
++ +E + E S I + E+T ++ K ++ K+N Q++ + L KELE
Sbjct: 367 LNKKNIELEKLIKESESYSTSIKKLESERTQLQTKLDEIIKQNTQKEELIKQLEKELE 424
>sp|Q99MI1|RB6I2_MOUSE ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus GN=Erc1
PE=1 SV=1
Length = 1120
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 115 LQDKVGQLEEELRRSDSECLLLMEELQSKEERLRNSALHIKKLEESISSSALES---QCE 171
LQ ++GQ+++EL R D+E L L +L++ + +S HI+ L+ES+++ + Q E
Sbjct: 464 LQSEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTE 523
Query: 172 IESLKI 177
+++L++
Sbjct: 524 VDALRL 529
>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
PE=1 SV=1
Length = 1116
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 115 LQDKVGQLEEELRRSDSECLLLMEELQSKEERLRNSALHIKKLEESISSSALES---QCE 171
LQ ++GQ+++EL R D+E L L +L++ + +S HI+ L+ES+++ + Q E
Sbjct: 464 LQAEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTE 523
Query: 172 IESLKI 177
+++L++
Sbjct: 524 VDALRL 529
>sp|Q4L180|FIL1L_HUMAN Filamin A-interacting protein 1-like OS=Homo sapiens GN=FILIP1L
PE=1 SV=2
Length = 1135
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 104/214 (48%), Gaps = 57/214 (26%)
Query: 16 EELLQIETRCRELRK--EKDTLRESQSQSFDLIKRLELHAKSLSEAHNEDKKHIQKLERE 73
EEL+++E +CR+L K E++TL QS+ F L ++KL +
Sbjct: 387 EELIKMEEQCRDLNKRLERETL---QSKDFKL--------------------EVEKLSKR 423
Query: 74 LMNCSQEIDYLQDQLNARNEEVYS--------------LSEHVHSLELKLVDMEILQDKV 119
+M ++ L+D N +E YS LS+ + SL++++ ++E ++ ++
Sbjct: 424 IM----ALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELESLKVRIKELEAIESRL 479
Query: 120 GQ----LEEELRRSDSECLLLMEELQSKEERLRNSALHIKKLEESISSSALESQCEIESL 175
+ L+E+L + + ++ ++E ++ E+L KK E+ + +++ SQ ++E
Sbjct: 480 EKTEFTLKEDLTKLKTLTVMFVDERKTMSEKL-------KKTEDKLQAAS--SQLQVEQN 530
Query: 176 KIDMIALEQTCVEAKKVHKENVQEKARMNSLIKE 209
K+ + E+ E K+ K + +M S+ KE
Sbjct: 531 KVTTVT-EKLIEETKRALKSKTDVEEKMYSVTKE 563
>sp|Q5B993|ATG11_EMENI Autophagy-related protein 11 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg11
PE=3 SV=2
Length = 1285
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 35 LRESQSQSFDLIKRLELHAKSLSEAHNEDKKHIQKLERELMNCSQEIDYLQDQLNARNEE 94
++E+QS DLI LE + S+ + +++ + + +E+D L D +R+ E
Sbjct: 607 MQEAQSTKNDLIGNLEARQREFSDERRYLEGEVKRFKIRVEELEEELDRLTD---SRDHE 663
Query: 95 VYSLSEHVHSLELKLVDMEILQDKVGQLEEELRRSDSECLLLMEELQSKEERLRNSALHI 154
E +H LEL+ LQD + + E+R++++ L+E++QS E S L +
Sbjct: 664 KQDADERMHQLELE------LQDAHARADAEMRKANN----LLEQMQSHREAADRSKLRM 713
Query: 155 KKLE 158
+LE
Sbjct: 714 DELE 717
>sp|P0CB05|CEP63_CHICK Centrosomal protein of 63 kDa OS=Gallus gallus GN=CEP63 PE=2 SV=1
Length = 711
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 115 LQDKVGQLEEELRRSDSECLLLMEEL-------QSKEERLRNSALHIKKLEESISSSALE 167
LQ +V LE+ L S++ C+ L EEL QS EE S + IKKL+E +S +
Sbjct: 347 LQAEVTHLEDSLVSSNARCVQLSEELAESIKELQSMEEHRAESKVEIKKLKEQLSQAEQI 406
Query: 168 SQCEIESLKIDMIALEQ 184
+ E+E ++ +++ L Q
Sbjct: 407 HRGELEGMRKEILRLTQ 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,132,033
Number of Sequences: 539616
Number of extensions: 5457851
Number of successful extensions: 45141
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 2714
Number of HSP's that attempted gapping in prelim test: 30582
Number of HSP's gapped (non-prelim): 10097
length of query: 399
length of database: 191,569,459
effective HSP length: 120
effective length of query: 279
effective length of database: 126,815,539
effective search space: 35381535381
effective search space used: 35381535381
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)