Query 015871
Match_columns 399
No_of_seqs 14 out of 16
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 03:58:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015871.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015871hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c0sa1 a.30.7.1 (A:1-57) Hypo 42.8 4.7 0.00035 29.2 1.6 16 73-88 30-45 (57)
2 d1ez3a_ a.47.2.1 (A:) Syntaxin 33.7 73 0.0053 23.3 7.3 60 171-230 11-77 (124)
3 d1fxkc_ a.2.5.1 (C:) Prefoldin 26.3 1E+02 0.0072 22.6 7.0 44 303-350 85-128 (133)
4 d1seta1 a.2.7.1 (A:1-110) Sery 26.1 85 0.0062 22.7 6.4 30 12-41 24-53 (110)
5 d1h3la_ a.177.1.1 (A:) Sigma f 21.9 18 0.0013 24.4 1.6 14 334-347 28-41 (75)
6 d1urfa_ a.2.6.1 (A:) Protein k 20.0 46 0.0033 24.5 3.7 36 59-94 37-72 (81)
7 d2gtsa1 a.25.5.1 (A:4-80) Hypo 19.1 16 0.0012 27.3 0.9 31 92-122 23-54 (77)
8 d1y7ya1 a.35.1.3 (A:5-73) Rest 17.7 50 0.0037 21.9 3.2 19 16-34 5-23 (69)
9 d1v9da_ a.207.1.1 (A:) Diaphan 16.8 2.3E+02 0.017 23.7 8.1 81 156-236 191-278 (332)
10 d1skva_ a.30.5.1 (A:) Hypothet 14.9 47 0.0034 24.2 2.5 26 172-197 24-56 (64)
No 1
>d2c0sa1 a.30.7.1 (A:1-57) Hypothetical protein BAS4809, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=42.80 E-value=4.7 Score=29.19 Aligned_cols=16 Identities=38% Similarity=0.559 Sum_probs=12.8
Q ss_pred HHhhhhhhhHhhHHhh
Q 015871 73 ELMNCSQEIDYLQDQL 88 (399)
Q Consensus 73 ELlNC~QEIDYLqDQL 88 (399)
..+.||||||.|-..+
T Consensus 30 kvl~~SQELD~LIN~~ 45 (57)
T d2c0sa1 30 KVISFSQELDRLLNLL 45 (57)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678999999996654
No 2
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.66 E-value=73 Score=23.31 Aligned_cols=60 Identities=10% Similarity=0.288 Sum_probs=35.2
Q ss_pred chhhhhhhHHHHHHHHHHHhhhhhhhH-------HHHHHHHHHHHHHHHHhHhHHHHHHHHHHhhHH
Q 015871 171 EIESLKIDMIALEQTCVEAKKVHKENV-------QEKARMNSLIKELEVRTQDSQEIIECLDKENKE 230 (399)
Q Consensus 171 EIESmKLD~~aLEQ~lfdA~k~q~et~-------~ek~~m~~~i~Elq~q~q~Aqe~i~~L~keNke 230 (399)
+|+.++-+|..|...+-.-...+..++ .-+++|+.++.+..........-++.|++.|++
T Consensus 11 eV~~Ir~~I~~i~~~v~~i~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 11 QVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555555555554444443333322 226677777777777777777777777766654
No 3
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.29 E-value=1e+02 Score=22.63 Aligned_cols=44 Identities=20% Similarity=0.293 Sum_probs=26.7
Q ss_pred chHHHHHhHHHHHhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 015871 303 NLKEKIKGMSLQICEYELLVKQLKEELRAEKFKAKEEAEDLAQEMAEL 350 (399)
Q Consensus 303 ~lk~kme~Ms~qi~eyE~LvkQLKeELREEKLKAKEEAEDLtQEMAEL 350 (399)
.+.+-++-+-++|..++..++.|..++ -+.+..+..+.++|.++
T Consensus 85 ~~~eA~~~l~~ri~~l~~~~~~l~~~~----~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 85 NFEDAMESIKSQKNELESTLQKMGENL----RAITDIMMKLSPQAEEL 128 (133)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 445666667777777666665554443 44555566666666655
No 4
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=26.15 E-value=85 Score=22.72 Aligned_cols=30 Identities=27% Similarity=0.537 Sum_probs=25.8
Q ss_pred CCChHHHHHhHHHHHHHHhhhhhhhhhhhh
Q 015871 12 VFDVEELLQIETRCRELRKEKDTLRESQSQ 41 (399)
Q Consensus 12 ~~d~eellqi~trc~~lrkek~~lr~sqsq 41 (399)
.+|++.++.+....+++..+.+-||.-+..
T Consensus 24 ~~~ld~i~~ld~~rr~l~~~~e~l~~~rN~ 53 (110)
T d1seta1 24 ALDLEALLALDREVQELKKRLQEVQTERNQ 53 (110)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999988876643
No 5
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}
Probab=21.88 E-value=18 Score=24.36 Aligned_cols=14 Identities=43% Similarity=0.544 Sum_probs=11.9
Q ss_pred hhhhhHHHHHHHHH
Q 015871 334 FKAKEEAEDLAQEM 347 (399)
Q Consensus 334 LKAKEEAEDLtQEM 347 (399)
.+-.++|||++||+
T Consensus 28 ~~d~~~aeDivQd~ 41 (75)
T d1h3la_ 28 TRNPADAEDLVQET 41 (75)
T ss_dssp HSCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH
Confidence 45679999999997
No 6
>d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.03 E-value=46 Score=24.51 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=30.9
Q ss_pred hhhhhhHHHHHHHHHHhhhhhhhHhhHHhhhhhhhh
Q 015871 59 AHNEDKKHIQKLERELMNCSQEIDYLQDQLNARNEE 94 (399)
Q Consensus 59 a~~eDk~~Iq~LEkELlNC~QEIDYLqDQLn~Rn~E 94 (399)
....|||.+..-+..|..+.|=||+|+-+|.-.++.
T Consensus 37 ~~~~DrK~l~eaq~~l~eS~~Ki~lLr~~L~~~~q~ 72 (81)
T d1urfa_ 37 GSTKDRKLLLTAQQMLQDSKTKIDIIRMQLRRALQA 72 (81)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345699999999999999999999999999776654
No 7
>d2gtsa1 a.25.5.1 (A:4-80) Hypothetical protein HP0062 {Helicobacter pylori [TaxId: 210]}
Probab=19.13 E-value=16 Score=27.30 Aligned_cols=31 Identities=35% Similarity=0.432 Sum_probs=20.0
Q ss_pred hhhhhhhhhhhhhhhhhh-ccccchHHHHHHH
Q 015871 92 NEEVYSLSEHVHSLELKL-VDMEILQDKVGQL 122 (399)
Q Consensus 92 n~Evn~l~EHih~LElKL-~~~e~l~e~V~~l 122 (399)
|.|||.|+-|.|+|+-=- ..-++|-+-+..|
T Consensus 23 ndevngls~hf~nl~swqd~~rd~fsevldnl 54 (77)
T d2gtsa1 23 REEVNSLSNHFHNLESWRDARRDKFSEVLDNL 54 (77)
T ss_dssp HHHHHHHHHHHTTCSSCCSHHHHHHHHHHHHH
T ss_pred HHHHhhHHHhhcchHhhhhhhHhHHHHHHHHH
Confidence 469999999999998422 2234444444443
No 8
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=17.68 E-value=50 Score=21.90 Aligned_cols=19 Identities=37% Similarity=0.571 Sum_probs=17.4
Q ss_pred HHHHHhHHHHHHHHhhhhh
Q 015871 16 EELLQIETRCRELRKEKDT 34 (399)
Q Consensus 16 eellqi~trc~~lrkek~~ 34 (399)
.++.+||.+-+++|+++.+
T Consensus 5 ~~~~~~g~~ik~~R~~~gl 23 (69)
T d1y7ya1 5 ADLVKFGQRLRELRTAKGL 23 (69)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4889999999999999988
No 9
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.81 E-value=2.3e+02 Score=23.68 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=48.3
Q ss_pred HHHhhhhccccccccchhhhhhhHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHhh
Q 015871 156 KLEESISSSALESQCEIESLKIDMIALEQTCVEAKKVHK-------ENVQEKARMNSLIKELEVRTQDSQEIIECLDKEN 228 (399)
Q Consensus 156 KLEESiSS~tLeSQcEIESmKLD~~aLEQ~lfdA~k~q~-------et~~ek~~m~~~i~Elq~q~q~Aqe~i~~L~keN 228 (399)
.+.+-++++.--|..-++.+.-|+..|...+-...+--+ ..-.....|...+......+...+.....+...-
T Consensus 191 ~~~~eL~~v~~ask~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~~~~~d~f~~~~~~Fl~~a~~~l~~l~~~~~~~~~~~ 270 (332)
T d1v9da_ 191 KFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLY 270 (332)
T ss_dssp SGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445566666677777777777777776654432211 1112346677777766666666666666666666
Q ss_pred HHHHHhhh
Q 015871 229 KELKEKLD 236 (399)
Q Consensus 229 keL~ekl~ 236 (399)
+++..-+.
T Consensus 271 ~~~~~yfg 278 (332)
T d1v9da_ 271 KELGDYFV 278 (332)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 66655553
No 10
>d1skva_ a.30.5.1 (A:) Hypothetical protein D-63 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=14.90 E-value=47 Score=24.15 Aligned_cols=26 Identities=31% Similarity=0.452 Sum_probs=21.0
Q ss_pred hhhhhhhHH-------HHHHHHHHHhhhhhhhH
Q 015871 172 IESLKIDMI-------ALEQTCVEAKKVHKENV 197 (399)
Q Consensus 172 IESmKLD~~-------aLEQ~lfdA~k~q~et~ 197 (399)
|--||+|.+ .+|.|+|-+.|+|-|--
T Consensus 24 ih~ikID~it~nydk~k~erAlFlsqkIqaELY 56 (64)
T d1skva_ 24 IHEIKIDRITGNMDKQKLGKAYFQVQKIEAELY 56 (64)
T ss_dssp HHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 556788876 49999999999997754
Done!