BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015875
(399 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/397 (98%), Positives = 396/397 (99%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
GLGPYST IKKAEKE+KD+AKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA
Sbjct: 29 GLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 88
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+PNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK
Sbjct: 89 RCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 148
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG
Sbjct: 149 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 208
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE
Sbjct: 209 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 268
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR
Sbjct: 269 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 328
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+A
Sbjct: 329 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 388
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct: 389 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 425
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/397 (97%), Positives = 393/397 (98%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
GLGPYS IKK EKEIKD+AKK+NDLCGIKESDTGLA PSQWDLVSDKQMMQEEQPLQVA
Sbjct: 30 GLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVA 89
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKIISPN+EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK
Sbjct: 90 RCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+A
Sbjct: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct: 390 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/397 (97%), Positives = 394/397 (99%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
GLGPYSTSIKK EKEIK+MAKK+NDLCGIKESDTGLA PSQWDLVSDKQMMQEEQPLQVA
Sbjct: 30 GLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVA 89
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKIISPN++DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK
Sbjct: 90 RCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+A
Sbjct: 330 LDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct: 390 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/397 (97%), Positives = 393/397 (98%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
GLGPYS SIKK EKEIKDM+KKVNDL GIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA
Sbjct: 30 GLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 89
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+PN+EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK
Sbjct: 90 RCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+A
Sbjct: 330 LDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct: 390 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/393 (86%), Positives = 369/393 (93%), Gaps = 1/393 (0%)
Query: 6 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT 65
PYS IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT
Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCT 129
Query: 66 KIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 125
+IISPN+EDAKYV+++K+I K+VVGLGDK SPTDIE GMRVGVD+ KYQIQIPLPPKIDP
Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189
Query: 126 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 185
SVTMMTVEEKPD TY+D+GGCKEQIEK+REVVELPMLHPEKFV+LGIDPPKGVLCYGPPG
Sbjct: 190 SVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPG 249
Query: 186 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 245
+GKTL+ARAVANRT ACFIRV+GSELVQKY+GEGARMVRELFQMARSKKACI+FFDE+DA
Sbjct: 250 SGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDA 309
Query: 246 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 305
IGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDR
Sbjct: 310 IGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDR 369
Query: 306 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 365
KVEF LPDLE RTQIFKIHTRTM+CERDIRFELLA LCPNSTGADIRSVC EAGM+AI A
Sbjct: 370 KVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGA 429
Query: 366 RRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 398
RRK+VTEKDFLDAVNKV+KGYQKFSATPKYM Y
Sbjct: 430 RRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAY 462
>sp|Q86JA1|PRS7_DICDI 26S protease regulatory subunit 7 OS=Dictyostelium discoideum
GN=psmC2 PE=1 SV=1
Length = 428
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/397 (82%), Positives = 356/397 (89%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G+GPYS SI+ E++IK M KVN+LCGIKESDTG+ PSQWDLV DK EE PLQVA
Sbjct: 32 GVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVA 91
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII +AKY+I VKQIAKFVV LGDK+SPTD+EEG+RVGVDRNKYQIQIPLPPK
Sbjct: 92 RCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPK 151
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
ID SVTMM VEEKPD+TY DVGGCKEQIEK+REVVE+P+LHPEKFV LGIDPPKGVL YG
Sbjct: 152 IDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYG 211
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDA F+RVIGSELVQKYVGEGARMVR+LFQMARSKKACI+FFDE
Sbjct: 212 PPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDE 271
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
VDAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPALLRPGR
Sbjct: 272 VDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGR 331
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEFGLPDLE R IF IH +TM+C RDIRFELLARLCPNSTGADIRSVCTEAGMFA
Sbjct: 332 LDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFA 391
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK V+EKDFL+A++KVIK Y KFSAT +YM YN
Sbjct: 392 IRARRKVVSEKDFLEAIDKVIKSYAKFSATSRYMHYN 428
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/397 (81%), Positives = 359/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/397 (81%), Positives = 359/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKVATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/397 (81%), Positives = 359/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/397 (81%), Positives = 359/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/397 (81%), Positives = 359/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/397 (81%), Positives = 358/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT I KIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/397 (81%), Positives = 358/397 (90%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVA
Sbjct: 37 GQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVA 96
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPK
Sbjct: 97 RCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV LGI+PPKGVL +G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFI VIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/397 (77%), Positives = 354/397 (89%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G GPY+ +K + +I++ KKVN+L G+KESDTGLA P+ WD+ +DKQ MQ+EQPLQVA
Sbjct: 39 GQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVA 98
Query: 63 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
RCTKII+ + D +Y+INVKQ AKFVV L D V+PTDIEEGMRVGVDRNKYQI +PLP K
Sbjct: 99 RCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAK 158
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE P+LHPE++V LGI+PPKGVL YG
Sbjct: 159 IDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYG 218
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE
Sbjct: 219 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 278
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DA+GGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGR
Sbjct: 279 IDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 338
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
LDRKVEF LPDL R I KIH + M+ ERDIR++LLARLCPNSTGA+IRSVCTEAGMFA
Sbjct: 339 LDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 399
IRARRK TEKDFL+A+NKV+KGY KFSATP+Y+ +N
Sbjct: 399 IRARRKVATEKDFLEAINKVVKGYAKFSATPRYLTHN 435
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 300/427 (70%), Positives = 351/427 (82%), Gaps = 30/427 (7%)
Query: 3 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 62
G PY+ +K+ E ++KD+ ++ + G+KESDTGLA WD++ D+Q + EE PLQVA
Sbjct: 41 GAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVA 100
Query: 63 RCTKIISPNSED------------------------------AKYVINVKQIAKFVVGLG 92
RCTKII N E AKYVIN+KQIAKFVVGLG
Sbjct: 101 RCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLG 160
Query: 93 DKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEK 152
++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMMTVEEKPDVTY+DVGGCK+QIEK
Sbjct: 161 ERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEK 220
Query: 153 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 212
+REVVELP+L PE+F LGIDPPKG+L YGPPGTGKTL ARAVANRTDA FIRVIGSELV
Sbjct: 221 LREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 280
Query: 213 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 272
QKYVGEGARMVRELF+MAR+KKACI+FFDE+DA+GGARFDDG GGDNEVQRTMLE++ QL
Sbjct: 281 QKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQL 340
Query: 273 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCER 332
DGFD RGNIKV+ ATNRP+TLDPALLRPGR+DRKVEF LPDLE R IF+IH+++M+ ER
Sbjct: 341 DGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVER 400
Query: 333 DIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSAT 392
IR+EL++RLCPNSTGA++RSVCTEAGMFAIRARRK TEKDFL AV+KVI GY+KFS+T
Sbjct: 401 GIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSST 460
Query: 393 PKYMVYN 399
+YM YN
Sbjct: 461 SRYMQYN 467
>sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt1 PE=1 SV=2
Length = 438
Score = 627 bits (1618), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/394 (75%), Positives = 343/394 (87%), Gaps = 2/394 (0%)
Query: 5 GPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARC 64
GPY+ + +++ + + K++ND GIKESDTGLA S WD+ +D+Q M EEQPLQVARC
Sbjct: 41 GPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARC 100
Query: 65 TKIIS--PNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 122
TKII ++E YVIN+KQIAKFVV LG++VSPTDIEEGMRVG DRNKY IQ+PLPPK
Sbjct: 101 TKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPK 160
Query: 123 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 182
IDPSVTMM VEEKPDVTY DVGGCKEQIE++REVVELP+L PE+FVKLGIDPPKG++ YG
Sbjct: 161 IDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYG 220
Query: 183 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 242
PPGTGKTL ARAVANRTDA FIRVIGSELVQKYVGEGARMVRELF+MAR+KKACI+FFDE
Sbjct: 221 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 280
Query: 243 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 302
+DAIGGARFDDG GGDNEVQRTMLE++ QLDGFD RGNIKVL ATNRP+TLD AL+RPGR
Sbjct: 281 IDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGR 340
Query: 303 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 362
+DRKVEFGLPDLE R I +IH ++M ++DIR+EL+ARLCP+ TGA++RSVCTEAGMFA
Sbjct: 341 IDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFA 400
Query: 363 IRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYM 396
IRARR+ TEKDFLDAV KV+KG QKFS+T YM
Sbjct: 401 IRARRRVATEKDFLDAVQKVVKGNQKFSSTADYM 434
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 257/383 (67%), Gaps = 8/383 (2%)
Query: 2 QGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 61
+G PY I K E+ +A+K +L ++ L A + L + Q++QE Q
Sbjct: 14 EGFRPYY--ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM-LREELQLLQE----QG 66
Query: 62 ARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPP 121
+ +++ P + K ++ V KFVV L V D+ RV + Y + LP
Sbjct: 67 SYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 125
Query: 122 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 181
K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL Y
Sbjct: 126 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 185
Query: 182 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 241
GPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F D
Sbjct: 186 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 245
Query: 242 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 301
E+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPG
Sbjct: 246 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 305
Query: 302 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMF 361
R+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+
Sbjct: 306 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 365
Query: 362 AIRARRKTVTEKDFLDAVNKVIK 384
A+R RR VT++DF AV KV++
Sbjct: 366 ALRERRVHVTQEDFEMAVAKVMQ 388
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/383 (50%), Positives = 258/383 (67%), Gaps = 6/383 (1%)
Query: 2 QGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 61
+G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q
Sbjct: 15 KGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QG 69
Query: 62 ARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPP 121
+ +++ P + K ++ V KFVV L + D+ RV + Y + LP
Sbjct: 70 SYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPN 128
Query: 122 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 181
K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL Y
Sbjct: 129 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 188
Query: 182 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 241
GPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F D
Sbjct: 189 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMD 248
Query: 242 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 301
E+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPG
Sbjct: 249 EIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 308
Query: 302 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMF 361
R+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+
Sbjct: 309 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 368
Query: 362 AIRARRKTVTEKDFLDAVNKVIK 384
A+R RR VT++DF AV KV++
Sbjct: 369 ALRERRVHVTQEDFEMAVAKVMQ 391
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 357 bits (917), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/384 (49%), Positives = 254/384 (66%), Gaps = 7/384 (1%)
Query: 2 QGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 61
QG G ++ + + + +K N+L ++ L + + L + Q++QE V
Sbjct: 28 QGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRM-LREELQLLQEPGSY-V 85
Query: 62 ARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPP 121
K++ N K ++ V K+VV + + T I RV + + Y + + LP
Sbjct: 86 GEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPS 141
Query: 122 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 181
K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL Y
Sbjct: 142 KVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 201
Query: 182 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 241
GPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F D
Sbjct: 202 GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 261
Query: 242 EVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 300
E+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRP
Sbjct: 262 EIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRP 321
Query: 301 GRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM 360
GR+DRK+EF P+ ESR I KIH+R MN R I + +A ++GA++++VCTEAGM
Sbjct: 322 GRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGM 381
Query: 361 FAIRARRKTVTEKDFLDAVNKVIK 384
FA+R RR VT++DF AV KV+K
Sbjct: 382 FALRERRVHVTQEDFEMAVAKVMK 405
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 241/347 (69%), Gaps = 11/347 (3%)
Query: 45 DLVSDKQMMQEE-QPLQ-----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 98
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 99 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 158
+ RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 159 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 218
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 219 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 277
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 278 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 337
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 338 LLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 384
+A ++GA++++VCTEAGMFA+R RR VT++DF AV KV+K
Sbjct: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 405
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 354 bits (908), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 175/327 (53%), Positives = 227/327 (69%), Gaps = 4/327 (1%)
Query: 58 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 117
PL V + I+ ED + V+ KFVV ++ +++ G RV +++ I
Sbjct: 62 PLLVGVVSDIL----EDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVN 117
Query: 118 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 177
LP DP V VEEKP+V+Y D+GG QIE++RE VELP+L PE F ++GI+PPKG
Sbjct: 118 VLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKG 177
Query: 178 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 237
VL YGPPGTGKTLLA+AVAN+T A FIRV+GSE VQKY+GEGAR+VRE+FQ+A+ K I
Sbjct: 178 VLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 237
Query: 238 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 297
+F DE+DAI R + GD EVQRTM++++ +LDGFD RG++KV+ ATNR D LDPA+
Sbjct: 238 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAI 297
Query: 298 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 357
LRPGR DR +E LP E R QIFKIHTR M D+ F+ LAR+ ++GADI+++CTE
Sbjct: 298 LRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTE 357
Query: 358 AGMFAIRARRKTVTEKDFLDAVNKVIK 384
AGMFAIR R VT DF A+ KV+K
Sbjct: 358 AGMFAIREERAKVTMLDFTKAIEKVLK 384
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 253/374 (67%), Gaps = 9/374 (2%)
Query: 9 TSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII 68
S ++ E +D+ +K+ DL + T S+ D+ S + + Q V K +
Sbjct: 27 NSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ-----IVGEVLKQL 81
Query: 69 SPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 128
S + K+++ ++VVG ++ ++++G RV +D I LP ++DP V
Sbjct: 82 S----EEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 129 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 188
M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PPKG L +GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 189 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 248
TLLARAVA++ D F++V+ S +V KY+GE ARM+RE+F AR + CIVF DE+DAIGG
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 249 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 308
RF +G D E+QRT++E++NQLDGFD+ G +KV+MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 309 FGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRK 368
GLP+ +SR +I KIH+ + +I FE + +L + AD+R+VCTEAGMFAIRA R+
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAERE 377
Query: 369 TVTEKDFLDAVNKV 382
V ++DF+ AV KV
Sbjct: 378 FVIDEDFMKAVRKV 391
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 352 bits (903), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%), Gaps = 1/309 (0%)
Query: 76 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 135
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 79 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 138
Query: 136 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 195
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 139 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV 198
Query: 196 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 255
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+I G+R + G
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGS 257
Query: 256 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 315
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 316 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 375
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
Query: 376 LDAVNKVIK 384
AV KV++
Sbjct: 378 EMAVAKVMQ 386
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 350 bits (899), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 223/308 (72%), Gaps = 1/308 (0%)
Query: 78 VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPD 137
+I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD
Sbjct: 93 LIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPD 152
Query: 138 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 197
TY VGG EQI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAVA+
Sbjct: 153 ATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAH 212
Query: 198 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-G 256
TD FIRV GSELVQKY+GEG++MVRELF MAR I+F DE+D+IG R + G G
Sbjct: 213 HTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGG 272
Query: 257 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 316
GD+EVQRTMLE++NQLDGF++ NIK++MATNR D LDPALLRPGR+DRK+EF P+ +
Sbjct: 273 GDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELA 332
Query: 317 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFL 376
R I KIH+R MN R I +A + ++GA+I++ CTEAGMFA+R RR VT++D
Sbjct: 333 RLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLE 392
Query: 377 DAVNKVIK 384
AV KV+K
Sbjct: 393 MAVAKVMK 400
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 348 bits (893), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/387 (47%), Positives = 251/387 (64%), Gaps = 10/387 (2%)
Query: 3 GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQV 61
G+ PY I++ E +I+ + V L + A + + D+ + +E V
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRN-----ALNDKVRFIKDELRLLQEPGSYV 72
Query: 62 ARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPP 121
KI+S D K ++ V+ K++V + ++ D++ RV + + Y + L
Sbjct: 73 GEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLEN 128
Query: 122 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 181
K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI PKGV+ Y
Sbjct: 129 KADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILY 188
Query: 182 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 241
GPPGTGKTLLARAVA+ TD FIRV G+ELVQKY+GEG+RMVRELF MAR I+F D
Sbjct: 189 GPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 248
Query: 242 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 301
E+D+IG R + GGD+EVQRTMLE++NQLDGF+ NIK++MATNR D LDPALLRPG
Sbjct: 249 EIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPG 308
Query: 302 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMF 361
R+DRK+EF P + +R +I +IH+R MN R I +A +GAD++ VCTEAGM+
Sbjct: 309 RIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMY 368
Query: 362 AIRARRKTVTEKDFLDAVNKVIKGYQK 388
A+R RR VT++DF AV KV+ Q+
Sbjct: 369 ALRERRIHVTQEDFELAVGKVMNKNQE 395
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 347 bits (891), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 241/353 (68%), Gaps = 10/353 (2%)
Query: 46 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVS 96
L +DK+ ++ E + +++ P + +D + ++ +FVV + +
Sbjct: 33 LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWID 92
Query: 97 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREV 156
+ + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE
Sbjct: 93 KSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREA 152
Query: 157 VELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYV 216
+ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+
Sbjct: 153 IELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYI 212
Query: 217 GEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD 276
GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD
Sbjct: 213 GEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFD 272
Query: 277 ARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF 336
RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M R +
Sbjct: 273 PRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDL 331
Query: 337 ELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKF 389
L+A L ++GAD++++ TEAGMFAIR RR VT++DFL A++KV+ +K
Sbjct: 332 RLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKKI 384
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 343 bits (881), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 220/300 (73%)
Query: 85 AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVG 144
K++V + V+ +++ G+RV + + Y + LP K+DP V++M VE+ PD TY +G
Sbjct: 140 GKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIG 199
Query: 145 GCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFI 204
G EQI+++REV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T FI
Sbjct: 200 GLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFI 259
Query: 205 RVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRT 264
RV GSELVQKY+GEG+R+VRELF MAR I+F DE+D+IG R D G D+EVQRT
Sbjct: 260 RVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRT 319
Query: 265 MLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 324
MLE++NQLDGF++ NIKV+MATNR D LDPALLR GR+DRK+EF P+ +R +I KIH
Sbjct: 320 MLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIH 379
Query: 325 TRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 384
+R MN + I E +A +GA++++VCTEAGM+A+R RR VT++DF AV+KV+K
Sbjct: 380 SRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKVLK 439
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 1/318 (0%)
Query: 73 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 132
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEV 129
Query: 133 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 192
EKP VTY D+GG + Q+ ++RE VELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 193 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 252
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF+MA+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 253 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 312
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 313 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 372
D R +I K+HTR MN R++ ++A + ++GAD++++ TEAGMFAIR RR VT+
Sbjct: 310 DFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQ 368
Query: 373 KDFLDAVNKVIKGYQKFS 390
+DFL AV+KV+ ++ +
Sbjct: 369 EDFLKAVDKVLGAEKRLA 386
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/353 (46%), Positives = 241/353 (68%), Gaps = 10/353 (2%)
Query: 46 LVSDKQMMQEEQPLQVARCTKIISPNS---------EDAKYVINVKQIAKFVVGLGDKVS 96
L +DK+ ++ E + +++ P + +D + ++ +FVV + +
Sbjct: 33 LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIE 92
Query: 97 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREV 156
+ G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE
Sbjct: 93 RDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREA 152
Query: 157 VELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYV 216
+ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+
Sbjct: 153 IELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYI 212
Query: 217 GEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD 276
GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD
Sbjct: 213 GEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Query: 277 ARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF 336
RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M +++
Sbjct: 273 PRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDL 331
Query: 337 ELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKF 389
++A + ++GAD++++ TEAGMFAIR RR VT++DFL AV+KV+ +K
Sbjct: 332 RVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKL 384
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 159/318 (50%), Positives = 228/318 (71%), Gaps = 1/318 (0%)
Query: 73 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 132
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEV 129
Query: 133 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 192
E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 193 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 252
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 253 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 312
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 313 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 372
D + R +I K+HTR MN + + ++A + ++GAD++++ TEAGMFAIR RR VT+
Sbjct: 310 DYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQ 368
Query: 373 KDFLDAVNKVIKGYQKFS 390
DFL AV+KVI ++ +
Sbjct: 369 DDFLKAVDKVIGSEKRLA 386
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 227/326 (69%), Gaps = 4/326 (1%)
Query: 58 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 117
PL +A T+++ +D + + FV+ + +E G RV +++ + I
Sbjct: 72 PLVIATVTEVL----DDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVD 127
Query: 118 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 177
LP + DP VT M VEEKPDV+Y +GG +EQ+ +++E VELP+ PE F K+GI+PPKG
Sbjct: 128 VLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKG 187
Query: 178 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 237
VL YGPPGTGKTLLA+AVA+ T+A FI+++ SE V+KY+GEGAR+VR +F++A+ K I
Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
Query: 238 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 297
+F DE+DA+ R GD EVQRT+++++ +LDGF++RGN+ ++ ATNRPD LDPAL
Sbjct: 248 IFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307
Query: 298 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 357
LRPGR DR +E LP+ + R +I KIHT M ++ ELLAR+ ++GAD++++CTE
Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTE 367
Query: 358 AGMFAIRARRKTVTEKDFLDAVNKVI 383
AGMFAIR R VT DF+DAV+K++
Sbjct: 368 AGMFAIRDERDEVTMADFMDAVDKIM 393
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 157/304 (51%), Positives = 220/304 (72%), Gaps = 1/304 (0%)
Query: 86 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 145
+FVV + + + G RV +D+ + LP DP+V V E+P+VTYND+GG
Sbjct: 85 RFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGG 144
Query: 146 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 205
K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 145 LKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 204
Query: 206 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 265
V+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 205 VVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL 264
Query: 266 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 325
++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HT
Sbjct: 265 MQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHT 324
Query: 326 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 385
R M + + +A + ++GAD++++ TEAGMFAIR RR VT++DFL AV+KV+
Sbjct: 325 RRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGN 383
Query: 386 YQKF 389
+K
Sbjct: 384 ERKL 387
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 228/338 (67%), Gaps = 5/338 (1%)
Query: 46 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 105
L SD Q M++ PL V +I+ +D + ++ KFV + V ++E G
Sbjct: 89 LRSDLQRMKK-PPLIVGTVEEIL----DDGRVIVKSSTGPKFVSNVSPTVDRNELEPGAN 143
Query: 106 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 165
V +++ + LP + D V M V+E PDV+Y+D+GG EQI ++REVVE P+ PE
Sbjct: 144 VALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPE 203
Query: 166 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 225
F K+G++PPKGVL YGPPGTGKTLLA+AVAN DA FIR+ ELVQK++GEGAR+VRE
Sbjct: 204 LFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRE 263
Query: 226 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 285
LF++AR K I+F DE+DAIG R D GD EVQRT+ +++ ++DGFD +IKV+
Sbjct: 264 LFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIA 323
Query: 286 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPN 345
ATNR D LDPALLRPGR DR ++ LPD E R +IFKIHTR MN D+ + LA++
Sbjct: 324 ATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEG 383
Query: 346 STGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVI 383
++GADI+++CTEAGM AIR R VT DFL AV++V+
Sbjct: 384 ASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVM 421
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 223/305 (73%), Gaps = 1/305 (0%)
Query: 86 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 145
+FVV + + +++ G RV +D+ I LP + DPSV V E+P V+YND+GG
Sbjct: 84 RFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGG 143
Query: 146 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 205
+Q++++RE +ELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 144 LDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 203
Query: 206 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 265
V+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 204 VVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTL 263
Query: 266 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 325
++++ ++DGFD GN+K++ ATNRPD LDPALLRPGR DR +E LP+ +SR +I KIHT
Sbjct: 264 MQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHT 323
Query: 326 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 385
+ MN + + ++A + ++GAD++++ EAGMFAIR RR+ VT++DFL A+ KV+
Sbjct: 324 KRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKVLGS 382
Query: 386 YQKFS 390
Q+ S
Sbjct: 383 EQRLS 387
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 223/323 (69%), Gaps = 1/323 (0%)
Query: 73 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 132
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 133 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 192
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 193 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 252
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 253 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 312
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 313 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 372
+ +SR +I KIH + +I +E + +L GAD+R++CTEAGMFAIRA R V
Sbjct: 311 NEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIH 370
Query: 373 KDFLDAVNKVIKGYQKFSATPKY 395
+DF+ AV K+ + +K ++ Y
Sbjct: 371 EDFMKAVRKLSEA-KKLESSSHY 392
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 335 bits (858), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 212/310 (68%)
Query: 74 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 133
+ K +I KFVV ++ ++ G +V +++ + LP DPSV M V
Sbjct: 92 NGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVV 151
Query: 134 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 193
+ P++ Y +GG + QI +++E VELP+L PE F K+GI+PPKGVL YGPPGTGKTLLA+
Sbjct: 152 DSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAK 211
Query: 194 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 253
AVANRT A FIR+IGSELVQKY+GEGARMVRELF++A+ K I+F DE+D+IG R D
Sbjct: 212 AVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDS 271
Query: 254 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 313
GD EVQRT+++++ ++DGFD RGN+++L ATNRPD LDPALLRPGR DR ++ +P
Sbjct: 272 ITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPT 331
Query: 314 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 373
E+R QI KIH R MN D+ +A + S+GAD+ ++ EAGMFAIR R V
Sbjct: 332 AEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSS 391
Query: 374 DFLDAVNKVI 383
DF AV KV+
Sbjct: 392 DFNAAVAKVM 401
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 335 bits (858), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 1/323 (0%)
Query: 73 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 132
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 133 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 192
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 193 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 252
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 253 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 312
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 313 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 372
+ +SR I KIH + +I +E + +L GAD+R++CTEAGMFAIRA R V
Sbjct: 311 NEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIH 370
Query: 373 KDFLDAVNKVIKGYQKFSATPKY 395
+DF+ AV K+ + +K ++ Y
Sbjct: 371 EDFMKAVRKLSEA-KKLESSSHY 392
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/378 (48%), Positives = 248/378 (65%), Gaps = 10/378 (2%)
Query: 7 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTK 66
Y+ I+ AE I +K +L ++ GL A + L + Q++QE V K
Sbjct: 20 YTQKIQDAELAI---LQKTQNLRRLEAQRNGLNARVRL-LREEIQLLQEPGSY-VGEVIK 74
Query: 67 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPS 126
+ N K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP
Sbjct: 75 TMGKN----KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPL 130
Query: 127 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 186
V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE F LGI PKG+L YGPPGT
Sbjct: 131 VSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGT 190
Query: 187 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV-DA 245
GKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+
Sbjct: 191 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Query: 246 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 305
G GD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR+DR
Sbjct: 251 GSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDR 310
Query: 306 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 365
K+EF P E+R +I +IH+R+MN R I + +A ++GA+++ VCTEAGMFA+R
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
Query: 366 RRKTVTEKDFLDAVNKVI 383
RR VT++DF AV KV+
Sbjct: 371 RRVHVTQEDFELAVAKVL 388
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 330 bits (845), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 244/385 (63%), Gaps = 12/385 (3%)
Query: 7 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTK 66
YST ++K E ++K+ +K ES D+ + +++E + K
Sbjct: 7 YSTDVQKNEMDLKEFKEKA--YLAELESKVLRLELKNKDITRENVQIKKENEILKRELDK 64
Query: 67 IISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 117
+ P + K V+ F+V L V P DI G RV +++ +
Sbjct: 65 LRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVE 124
Query: 118 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 177
LP + D M +EEKPD+ + D+GG QI ++EVVELP+ +PE F K+GI PPKG
Sbjct: 125 VLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKG 184
Query: 178 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 237
VL YGPPGTGKTLLA+AVA T+A F+RV+GSELV+K++GEGA++VR++F++A+ K CI
Sbjct: 185 VLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244
Query: 238 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 297
+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+
Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAI 304
Query: 298 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 357
LRPGR DR +E PD + R +IFKIHT MN + + +A++ N GADI++VCTE
Sbjct: 305 LRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTE 363
Query: 358 AGMFAIRARRKTVTEKDFLDAVNKV 382
AGMFAIR R+ VT KDF +A+ KV
Sbjct: 364 AGMFAIREGREYVTTKDFKEALLKV 388
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 74 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 133
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 134 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 193
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 194 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 253
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 254 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 313
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 314 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 373
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 374 DFLDAVNKV 382
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 74 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 133
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 134 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 193
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 194 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 253
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 254 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 313
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 314 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 373
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 374 DFLDAVNKV 382
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 74 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 133
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 134 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 193
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 194 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 253
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 254 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 313
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 314 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 373
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 374 DFLDAVNKV 382
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 218/304 (71%), Gaps = 1/304 (0%)
Query: 87 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGC 146
F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG
Sbjct: 94 FLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGL 153
Query: 147 KEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRV 206
QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV
Sbjct: 154 NNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRV 213
Query: 207 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML 266
+GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT++
Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLM 273
Query: 267 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 326
+++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R +I KIHT
Sbjct: 274 QLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE 333
Query: 327 TMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 386
MN +++ +A+L N GAD+++VCTEAGMFAIR R+ + DF +A++K+
Sbjct: 334 KMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKK 392
Query: 387 QKFS 390
+K S
Sbjct: 393 EKCS 396
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 327 bits (838), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 231/337 (68%), Gaps = 6/337 (1%)
Query: 58 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 117
P+ V +II +D +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 118 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 177
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 178 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 237
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 238 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 297
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 298 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 357
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTE
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 401
Query: 358 AGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPK 394
AG+ A+R RR VT +DF + V+ Y+K TP+
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 327 bits (838), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 231/337 (68%), Gaps = 6/337 (1%)
Query: 58 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 117
P+ V +II +D +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 118 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 177
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 178 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 237
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 238 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 297
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 298 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 357
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTE
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 401
Query: 358 AGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPK 394
AG+ A+R RR VT +DF + V+ Y+K TP+
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,663,048
Number of Sequences: 539616
Number of extensions: 6544549
Number of successful extensions: 26866
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 1165
Number of HSP's that attempted gapping in prelim test: 24201
Number of HSP's gapped (non-prelim): 2929
length of query: 399
length of database: 191,569,459
effective HSP length: 120
effective length of query: 279
effective length of database: 126,815,539
effective search space: 35381535381
effective search space used: 35381535381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)