Query         015877
Match_columns 399
No_of_seqs    315 out of 2550
Neff          9.4 
Searched_HMMs 29240
Date          Mon Mar 25 04:04:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015877hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3hqi_A Speckle-type POZ protei 100.0   7E-58 2.4E-62  429.5  32.6  302   30-355     2-312 (312)
  2 3hve_A Gigaxonin; ubiquitin, c 100.0 3.2E-36 1.1E-40  274.2  10.5  189  187-395    15-210 (256)
  3 3i3n_A Kelch-like protein 11;  100.0 3.1E-35 1.1E-39  271.0   8.8  189  187-395    16-218 (279)
  4 3htm_A Speckle-type POZ protei 100.0 5.9E-32   2E-36  231.1  14.9  161  181-355    12-172 (172)
  5 4eoz_A Speckle-type POZ protei 100.0 7.8E-30 2.7E-34  211.6   8.1  143  181-335     3-145 (145)
  6 3ivv_A Speckle-type POZ protei  99.9 5.6E-26 1.9E-30  188.0  14.4  132   31-172     7-144 (145)
  7 4ghu_A TNF receptor-associated  99.9 1.5E-25 5.3E-30  193.9   9.8  139   32-172    37-188 (198)
  8 2if5_A Zinc finger and BTB dom  99.9 2.3E-25   8E-30  178.3   9.4  111  187-309     9-119 (120)
  9 4gjh_A TNF receptor-associated  99.9 4.1E-25 1.4E-29  188.8   9.9  138   31-172    20-174 (178)
 10 1r29_A B-cell lymphoma 6 prote  99.9   7E-25 2.4E-29  177.3   9.8  112  187-311    13-125 (127)
 11 2vkp_A BTB/POZ domain-containi  99.9 1.4E-24 4.7E-29  170.7   9.4  104  197-313     2-109 (109)
 12 2z8h_A Transcription regulator  99.9 4.9E-25 1.7E-29  180.7   7.0  119  185-317    18-137 (138)
 13 1lb6_A TNF receptor-associated  99.9 2.4E-24 8.3E-29  181.2  11.4  137   33-172     3-157 (160)
 14 2foj_A Ubiquitin carboxyl-term  99.9 1.2E-23   4E-28  176.1  14.9  127   33-172    17-149 (155)
 15 3b84_A Zinc finger and BTB dom  99.9 1.8E-24 6.3E-29  172.6   8.7  108  188-311     9-116 (119)
 16 2ppi_A Gigaxonin; BTB domain,   99.9 2.2E-24 7.4E-29  178.0   8.3  110  188-309    32-143 (144)
 17 2vpk_A Myoneurin; transcriptio  99.9 6.6E-24 2.3E-28  168.7  10.7  107  188-310     7-115 (116)
 18 1buo_A POZ domain, protein (pr  99.9 4.8E-24 1.6E-28  170.8   9.6  109  187-312    12-120 (121)
 19 2yy9_A Zinc finger and BTB dom  99.9 2.8E-24 9.7E-29  175.4   8.0  113  188-316    10-122 (135)
 20 2gkw_A TNF receptor-associated  99.9 4.2E-24 1.4E-28  184.6   7.8  136   33-172    38-188 (192)
 21 1ca9_A TRAF2, protein (TNF rec  99.9 9.1E-24 3.1E-28  182.9   8.7  136   32-172    40-191 (192)
 22 1d00_A Tumor necrosis factor r  99.9 2.4E-23 8.2E-28  176.6   9.1  135   33-172    17-167 (168)
 23 2q81_A MIZ-1 protein; BTB/POZ   99.9 2.6E-23 8.8E-28  165.9   7.8  107  187-310    11-117 (119)
 24 2ihc_A Transcription regulator  99.9   2E-24 6.8E-29  173.8   1.1  111  186-310    12-123 (124)
 25 1flk_A TNF receptor associated  99.9   2E-23 6.7E-28  185.2   7.6  137   32-172    73-224 (228)
 26 3ohu_A Transcription regulator  99.9   6E-24 2.1E-28  171.3   2.8  108  188-309    17-125 (125)
 27 3ga1_A Nucleus accumbens-assoc  99.9 1.7E-23 5.9E-28  169.5   4.4  109  188-312    18-127 (129)
 28 3m5b_A Zinc finger and BTB dom  99.9   5E-22 1.7E-26  158.0   7.0  102  187-311    16-117 (119)
 29 3fkc_A Transcriptional regulat  99.9 2.7E-21 9.1E-26  153.3  11.2  100  188-303    16-115 (116)
 30 2f1z_A Ubiquitin carboxyl-term  99.8 1.3E-19 4.6E-24  180.8  12.9  128   32-172    28-161 (522)
 31 2ast_A S-phase kinase-associat  99.4 2.9E-13 9.9E-18  112.8  10.0  114  206-320     3-133 (159)
 32 4gwm_A Meprin A subunit beta;   99.3   1E-11 3.4E-16  123.0  13.4  134   30-172   401-567 (592)
 33 4ajy_C Transcription elongatio  99.2 5.3E-11 1.8E-15   90.3   7.0   83  206-298     4-97  (97)
 34 2eqx_A Kelch repeat and BTB do  99.1 7.1E-12 2.4E-16   96.7   0.7   80  310-395     5-84  (105)
 35 1fs1_B SKP1, cyclin A/CDK2-ass  99.1 2.5E-10 8.5E-15   92.8   7.7  111  206-321     4-129 (141)
 36 2p1m_A SKP1-like protein 1A; F  98.9 3.1E-10 1.1E-14   94.3   2.7  110  206-319     6-131 (160)
 37 3v7d_A Suppressor of kinetocho  98.5 8.8E-07   3E-11   73.9   9.9  113  205-318     8-138 (169)
 38 1hv2_A Elongin C, ELC1; protei  98.4 7.5E-07 2.6E-11   67.3   7.9   92  205-298     5-99  (99)
 39 3drz_A BTB/POZ domain-containi  98.4 1.6E-06 5.4E-11   66.6   8.5   95  205-311     7-106 (107)
 40 2fnj_C Transcription elongatio  98.3 6.3E-07 2.2E-11   67.3   4.8   91  206-298     3-96  (96)
 41 1vcb_B Protein (elongin C); tu  97.9 1.9E-05 6.7E-10   60.8   6.5   92  205-298    18-112 (112)
 42 3drx_A BTB/POZ domain-containi  97.3 0.00047 1.6E-08   58.3   6.8   95  205-311    13-112 (202)
 43 3kvt_A Potassium channel prote  95.5  0.0028 9.7E-08   48.8   0.5   85  205-301     6-92  (115)
 44 1s1g_A Potassium voltage-gated  94.9    0.02   7E-07   44.6   3.8   83  204-301    13-99  (124)
 45 1t1d_A Protein (potassium chan  94.4   0.019 6.4E-07   42.9   2.3   84  206-301     3-89  (100)
 46 1nn7_A Potassium channel KV4.2  94.1  0.0086   3E-07   45.3  -0.1   81  206-301     2-86  (105)
 47 2nz0_B Potassium voltage-gated  93.9    0.04 1.4E-06   43.8   3.5   84  203-301    34-121 (140)
 48 2vkp_A BTB/POZ domain-containi  82.8    0.68 2.3E-05   34.5   2.6   30  313-342    77-106 (109)
 49 2yy9_A Zinc finger and BTB dom  79.3     1.4 4.9E-05   34.4   3.4   36  312-349    86-121 (135)
 50 2z8h_A Transcription regulator  77.8     1.5   5E-05   34.4   3.1   33  313-347   101-133 (138)
 51 2q81_A MIZ-1 protein; BTB/POZ   77.4       2 6.8E-05   32.6   3.6   30  313-342    88-117 (119)
 52 1r29_A B-cell lymphoma 6 prote  75.7     2.3 7.9E-05   32.6   3.7   30  313-342    95-124 (127)
 53 3b84_A Zinc finger and BTB dom  75.7     2.1 7.2E-05   32.5   3.4   30  313-342    86-115 (119)
 54 2eqx_A Kelch repeat and BTB do  75.4     1.6 5.6E-05   32.4   2.6   32  281-312     8-39  (105)
 55 2vpk_A Myoneurin; transcriptio  75.4     2.5 8.4E-05   31.8   3.7   30  313-342    86-115 (116)
 56 2if5_A Zinc finger and BTB dom  73.8     3.2 0.00011   31.3   4.0   29  313-341    91-119 (120)
 57 2ppi_A Gigaxonin; BTB domain,   71.1     2.9 9.8E-05   33.0   3.2   30  313-342   115-144 (144)
 58 1buo_A POZ domain, protein (pr  70.8     3.9 0.00013   31.0   3.9   30  313-342    89-118 (121)
 59 2r9r_B Paddle chimera voltage   69.4     3.4 0.00012   40.3   3.9   85  205-301    53-140 (514)
 60 3m5b_A Zinc finger and BTB dom  64.9     5.6 0.00019   30.2   3.6   31  312-342    86-116 (119)
 61 3htm_A Speckle-type POZ protei  61.2     4.5 0.00015   32.7   2.6   33  281-313   132-164 (172)
 62 4eoz_A Speckle-type POZ protei  59.8     5.3 0.00018   31.1   2.7   30  313-342    91-120 (145)
 63 3v0r_A Major allergen ALT A 1;  57.8     1.2 4.2E-05   34.1  -1.3   32   30-63      7-38  (133)
 64 3ga1_A Nucleus accumbens-assoc  51.4     2.9 9.9E-05   32.2  -0.2   31  312-342    95-125 (129)
 65 2ihc_A Transcription regulator  49.1     1.9 6.6E-05   33.0  -1.6   30  313-342    94-123 (124)
 66 2ast_A S-phase kinase-associat  48.9      52  0.0018   26.1   7.1   52  304-363    87-138 (159)
 67 3hqi_A Speckle-type POZ protei  48.5     8.9  0.0003   34.4   2.6   33  281-313   272-304 (312)
 68 1fs1_B SKP1, cyclin A/CDK2-ass  40.9      79  0.0027   24.5   6.8   60  281-342    44-118 (141)
 69 2plx_B Peptide inhibitor; heli  39.4      22 0.00075   18.0   2.0   22  320-341     3-24  (26)
 70 3ohu_A Transcription regulator  37.6     2.7 9.3E-05   32.1  -2.4   30  312-341    96-125 (125)
 71 3hve_A Gigaxonin; ubiquitin, c  35.6      18 0.00062   31.3   2.4   31  312-342    98-128 (256)
 72 3i3n_A Kelch-like protein 11;   28.8      29 0.00098   30.4   2.6   30  313-342   107-136 (279)

No 1  
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00  E-value=7e-58  Score=429.46  Aligned_cols=302  Identities=32%  Similarity=0.603  Sum_probs=254.2

Q ss_pred             eeeeeeEEEEEEcCccccccCCCCCeeecCceeecCe---EEEEEEecCCCCCCCCCCeEEEEEEeeC-CCceEEEEEEE
Q 015877           30 TETVNGSHQFKITGYSLSKGLGIGKYIASDTFMVGGY---AWAIYFYPDGKSVEDNAAYVSLFIALAS-EGTDVRALFEL  105 (399)
Q Consensus        30 ~~~~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~~gg~---~W~l~~~p~g~~~~~~~~~lsl~l~~~~-~~w~~~a~~~~  105 (399)
                      +++++++|+|+|+|||.++ .+.|+++.||+|.+||+   +|+|++||+|++. ++++|+|+||.|.+ ..|++.|+|++
T Consensus         2 s~~~~~~~~w~I~nfs~~~-~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~-~~~~~lslyL~~~~~~~~~v~a~~~~   79 (312)
T 3hqi_A            2 SKVVKFSYMWTINNFSFCR-EEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKFKF   79 (312)
T ss_dssp             EEEEEEEEEEEETTGGGCC-CCTTCCEECCCBCC--CCCCEEEEEEETTCCC---CTTEEEEEEEEEECCC-CEEEEEEE
T ss_pred             CceEEEEEEEEEcCcchhh-hcCCCeEeeCCcccCCCCCceEEEEEECCCCCc-cCCCcEEEEEEEcCCCCCcEEEEEEE
Confidence            3567899999999999997 46789999999999995   9999999999874 36799999999976 57999999999


Q ss_pred             EEeeCCCCccceeeeccccceecCCeeeeccCccccceeeeecccc--cccccccCCeEEEEEEeeeecccC---CCCcc
Q 015877          106 TLLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHT---EGPKI  180 (399)
Q Consensus       106 ~ll~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~~l~~d~l~i~~~i~v~~~~~---~~~~~  180 (399)
                      +|+|++|.......       ....++|. ++.+|||++|++|++|  +.+||+.||+++|+|+|.|.....   .....
T Consensus        80 ~l~~~~~~~~~~~~-------~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~  151 (312)
T 3hqi_A           80 SILNAKGEETKAME-------SQRAYRFV-QGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTM  151 (312)
T ss_dssp             EEECTTSCEEEEEE-------CSSCEEEC-TTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCC
T ss_pred             EEEeCCCCcccccc-------cCCceeCC-CCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccccccc
Confidence            99999886643221       12345665 4568999999999999  457899999999999999996321   12233


Q ss_pred             ccccCCCCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhh
Q 015877          181 YSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLH  260 (399)
Q Consensus       181 ~~~~~p~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~  260 (399)
                      ..+.+|++.+.+++..++.++.++||+|.|+|++|+|||+|||++||||++||.+++.|+...+|.++++++++|+.+|+
T Consensus       152 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~  231 (312)
T 3hqi_A          152 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC  231 (312)
T ss_dssp             SSCCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHH
T ss_pred             cccCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHHHHHHh
Q 015877          261 FIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLKF  340 (399)
Q Consensus       261 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~  340 (399)
                      |+||+.++            +...++.+||.+|++|+++.|+..|+++|.+.++.+|+..++.+|++|++..|++.|++|
T Consensus       232 ~iYt~~~~------------~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~  299 (312)
T 3hqi_A          232 FIYTGKAP------------NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDF  299 (312)
T ss_dssp             HHHHSCCT------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             hhcCCCCC------------ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999998            677899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCcHHHHhcccc
Q 015877          341 VAMPENLRGGYSIDS  355 (399)
Q Consensus       341 i~~~~~~~~v~~~~~  355 (399)
                      |.  .||.+++++++
T Consensus       300 i~--~~~~~v~~s~g  312 (312)
T 3hqi_A          300 IN--YHATDVLETSG  312 (312)
T ss_dssp             HH--HTC--------
T ss_pred             HH--HHHHHHhhCCC
Confidence            99  99999988753


No 2  
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00  E-value=3.2e-36  Score=274.20  Aligned_cols=189  Identities=20%  Similarity=0.237  Sum_probs=160.4

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCC--CCCcceEEeeCCCHHHHHHHhhhhcc
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMK--DQNTQCIKVEDMEAPVFKALLHFIYW  264 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~--e~~~~~i~l~~~~~~~f~~~L~~iYt  264 (399)
                      +..+.+++..++.++.+|||+|.|+|++|+|||.||+++|+||++||.+++.  ++....|.++++++++|+.+|+|+||
T Consensus        15 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt   94 (256)
T 3hve_A           15 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS   94 (256)
T ss_dssp             HHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccC
Confidence            3567889999999999999999999999999999999999999999999886  66778999999999999999999999


Q ss_pred             CCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHHHHHHhccCc
Q 015877          265 DSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLKFVAMP  344 (399)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~  344 (399)
                      |.+.            ++.+++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|.+||.  
T Consensus        95 ~~~~------------i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~--  160 (256)
T 3hve_A           95 GQIR------------LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLE--  160 (256)
T ss_dssp             SCCC------------CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHH--
T ss_pred             CCCc------------ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHH--
Confidence            9997            77788999999999999999999999999999999999999999999999999999999999  


Q ss_pred             CcHHHHhcccchHHHH-----HHhhhchhhHhHhhhHHHhhHHHHHhcCcccccCC
Q 015877          345 ENLRGGYSIDSIHIQQ-----IYIVSNNFVITLCFLVWKEKKLFYELCRPIKCSSI  395 (399)
Q Consensus       345 ~~~~~v~~~~~f~~L~-----~~l~~~~l~~~~~~~~~~E~~v~~~~~~Wi~~n~~  395 (399)
                      .||.++..+++|.+|+     .+|.++.|      ++.+|.+||+++++|++|+..
T Consensus       161 ~~f~~v~~~~~f~~L~~~~l~~lL~~d~L------~v~~E~~v~~av~~W~~~~~~  210 (256)
T 3hve_A          161 THFRDVSSTEEFLELSPQKLKEVISLEKL------NVGNERYVFEAVIRWIAHDTE  210 (256)
T ss_dssp             HHHHHHTTCHHHHSSCHHHHHHHHHCC-------------CTTHHHHTTTCCC--C
T ss_pred             HHHHHHhCCcchhcCCHHHHHHHHccCCC------CCCCHHHHHHHHHHHHHcCHH
Confidence            9999999999999888     46777777      889999999999999999865


No 3  
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00  E-value=3.1e-35  Score=270.99  Aligned_cols=189  Identities=20%  Similarity=0.253  Sum_probs=170.0

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEc---CeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEee------CCCHHHHHH
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVN---GETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVE------DMEAPVFKA  257 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~---~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~------~~~~~~f~~  257 (399)
                      ++.+.+.+..++.++.+|||+|.|+   |++|+|||.||+++|+||++||.+++.|+....|.++      ++++++|+.
T Consensus        16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~   95 (279)
T 3i3n_A           16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEA   95 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHH
Confidence            3567889999999999999999998   9999999999999999999999999999999999998      899999999


Q ss_pred             HhhhhccCCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHHHH
Q 015877          258 LLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVC  337 (399)
Q Consensus       258 ~L~~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~  337 (399)
                      +|+|+|||.+.            ++.+++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|
T Consensus        96 ll~~~Ytg~~~------------i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~  163 (279)
T 3i3n_A           96 VIEYMYTGRIR------------VSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKA  163 (279)
T ss_dssp             HHHHHHHSEEE------------EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHhhCcCCcc------------cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHH
Confidence            99999999987            777889999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCcCcHHHHhcccchHHHH-----HHhhhchhhHhHhhhHHHhhHHHHHhcCcccccCC
Q 015877          338 LKFVAMPENLRGGYSIDSIHIQQ-----IYIVSNNFVITLCFLVWKEKKLFYELCRPIKCSSI  395 (399)
Q Consensus       338 ~~~i~~~~~~~~v~~~~~f~~L~-----~~l~~~~l~~~~~~~~~~E~~v~~~~~~Wi~~n~~  395 (399)
                      .+||.  .||.++..+++|.+|+     .+|.++.|      ++.+|.+||+++++|++|+..
T Consensus       164 ~~~i~--~~f~~v~~~~~f~~L~~~~l~~lL~~d~L------~v~sE~~vf~av~~W~~~~~~  218 (279)
T 3i3n_A          164 ADMIR--RNFHKVIQDEEFYTLPFHLIRDWLSDLEI------TVDSEEVLFETVLKWVQRNAE  218 (279)
T ss_dssp             HHHHH--HTHHHHTTSSGGGGSCHHHHHHHHTCSSC------CCSCHHHHHHHHHHHHHTTHH
T ss_pred             HHHHH--HHHHHHhcCcChhcCCHHHHHHHhcCcCC------CCCCHHHHHHHHHHHHHcCHH
Confidence            99999  9999999999999988     46777777      889999999999999999853


No 4  
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.98  E-value=5.9e-32  Score=231.08  Aligned_cols=161  Identities=35%  Similarity=0.605  Sum_probs=147.6

Q ss_pred             ccccCCCCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhh
Q 015877          181 YSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLH  260 (399)
Q Consensus       181 ~~~~~p~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~  260 (399)
                      ..++.|++.+.+++.+++.++.++||+|.|+|++|+|||.||+++|+||++||.+++.++....|.++++++++|+.+|+
T Consensus        12 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~   91 (172)
T 3htm_A           12 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC   91 (172)
T ss_dssp             CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             hhccCCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHHHHHHh
Q 015877          261 FIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLKF  340 (399)
Q Consensus       261 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~  340 (399)
                      |+|++.++            ++.+++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|.+|++..|++.|++|
T Consensus        92 ~~Yt~~~~------------~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~  159 (172)
T 3htm_A           92 FIYTGKAP------------NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDF  159 (172)
T ss_dssp             HHHHSCCT------------TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHhCCCCC------------CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence            99999997            667789999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCcHHHHhcccc
Q 015877          341 VAMPENLRGGYSIDS  355 (399)
Q Consensus       341 i~~~~~~~~v~~~~~  355 (399)
                      |.  .||.+++++++
T Consensus       160 i~--~~~~~v~~s~~  172 (172)
T 3htm_A          160 IN--YHATDVLETSG  172 (172)
T ss_dssp             HH--HTC--------
T ss_pred             HH--HHHHHHHcCCC
Confidence            99  99999987753


No 5  
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96  E-value=7.8e-30  Score=211.59  Aligned_cols=143  Identities=38%  Similarity=0.668  Sum_probs=109.5

Q ss_pred             ccccCCCCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhh
Q 015877          181 YSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLH  260 (399)
Q Consensus       181 ~~~~~p~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~  260 (399)
                      ..++.|++.+.+++..++.++.++||+|.++|++|+|||.||+++|+||++||.+++.++....|.++++++++|+.+|+
T Consensus         3 ~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~   82 (145)
T 4eoz_A            3 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC   82 (145)
T ss_dssp             --CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHH
T ss_pred             CcccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999988888899999999999999999


Q ss_pred             hhccCCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHH
Q 015877          261 FIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKS  335 (399)
Q Consensus       261 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~  335 (399)
                      |+|++.++            ++.+++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|++|++..|++
T Consensus        83 ~~Y~~~~~------------~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~  145 (145)
T 4eoz_A           83 FIYTGKAP------------NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT  145 (145)
T ss_dssp             HHHHSCCT------------TGGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred             hhccCccC------------CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence            99999997            6677899999999999999999999999999999999999999999999999874


No 6  
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.94  E-value=5.6e-26  Score=188.03  Aligned_cols=132  Identities=31%  Similarity=0.639  Sum_probs=110.8

Q ss_pred             eeeeeEEEEEEcCccccccCCCCCeeecCceeecCe---EEEEEEecCCCCCCCCCCeEEEEEEeeCC-CceEEEEEEEE
Q 015877           31 ETVNGSHQFKITGYSLSKGLGIGKYIASDTFMVGGY---AWAIYFYPDGKSVEDNAAYVSLFIALASE-GTDVRALFELT  106 (399)
Q Consensus        31 ~~~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~~gg~---~W~l~~~p~g~~~~~~~~~lsl~l~~~~~-~w~~~a~~~~~  106 (399)
                      +++.++|+|+|+|||.+++ +.|+++.||+|.+||+   +|+|++||+|+.. ++.+|+|+||.|... .|++.|+|+++
T Consensus         7 ~~~~~~~~w~I~~fs~~~~-~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~w~v~a~f~l~   84 (145)
T 3ivv_A            7 KVVKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKFKFS   84 (145)
T ss_dssp             CCCEEEEEEEESSGGGCCC-CTTCCEECCCEEESGGGCEEEEEEEETTCSSG-GGTTEEEEEEEEEECSSSEEEEEEEEE
T ss_pred             cEEEEEEEEEEcCchHHhh-cCCCEEECCCcCCCCcCCceEEEEEEcCCCCC-CCCCeEEEEEEEcCCCCCcEEEEEEEE
Confidence            4578999999999999875 5688999999999995   9999999999874 367899999999764 79999999999


Q ss_pred             EeeCCCCccceeeeccccceecCCeeeeccCccccceeeeecccc--cccccccCCeEEEEEEeeeec
Q 015877          107 LLDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       107 ll~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      |+|+++.......       ....++|. ...+|||++|+++++|  +.++||.||+++|+|+|.|++
T Consensus        85 llnq~~~~~~~~~-------~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~  144 (145)
T 3ivv_A           85 ILNAKGEETKAME-------SQRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ  144 (145)
T ss_dssp             EECTTSCEEEEEE-------CSSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred             EEecCCCceeeec-------ccceEEec-CCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence            9999886542211       11235665 4678999999999999  668999999999999999975


No 7  
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.92  E-value=1.5e-25  Score=193.90  Aligned_cols=139  Identities=24%  Similarity=0.341  Sum_probs=110.4

Q ss_pred             eeeeEEEEEEcCcccccc---CCCCCeeecCceeec--CeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceEE
Q 015877           32 TVNGSHQFKITGYSLSKG---LGIGKYIASDTFMVG--GYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDVR  100 (399)
Q Consensus        32 ~~~~~~~w~I~nfs~~~~---~~~g~~~~S~~f~~g--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~~  100 (399)
                      +..|.|+|+|+|||.+++   ++.|+++.|++|.+|  ||+|+|++||+|++.+ +++|+|+||.+.++      .|++.
T Consensus        37 ~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~-~~~~lSlyL~l~~g~~D~~l~wp~~  115 (198)
T 4ghu_A           37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMG-KGTHLSLFFVIMRGEYDALLPWPFK  115 (198)
T ss_dssp             CSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGG-TTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred             ccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCC-CCCeEEEEEEecCCccCCCCCceEE
Confidence            467999999999999986   567899999999999  9999999999998743 67899999998753      59999


Q ss_pred             EEEEEEEeeCCCCccceeeecccc--ceecCCeeeeccCccccceeeeecccccccccccCCeEEEEEEeeeec
Q 015877          101 ALFELTLLDQSGKERHKVHSHFGR--TLESGPYTLKYRGSMWGYKRFFKRTLLEQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       101 a~~~~~ll~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~~~~G~~~fi~~~~L~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      |+|+|+|+||.+.+.+.... +..  ....-...|...+.+|||+.|+++++|+.+|||+||+++|+|+|.|..
T Consensus       116 a~~~l~Lldq~~~~~~~~~~-~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~  188 (198)
T 4ghu_A          116 QKVTLMLMDQGSSRRHLGDA-FKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD  188 (198)
T ss_dssp             CCEEEEECCCSTTCCCEEEE-ECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCTT
T ss_pred             EEEEEEEEcCCCCccceEEE-eecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEecc
Confidence            99999999998764332211 100  000001123334668999999999999888999999999999998876


No 8  
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.92  E-value=2.3e-25  Score=178.30  Aligned_cols=111  Identities=25%  Similarity=0.324  Sum_probs=100.9

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCC
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDS  266 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~  266 (399)
                      ++.+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|||.
T Consensus         9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~   88 (120)
T 2if5_A            9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT   88 (120)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHH
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANL  309 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l  309 (399)
                      ++            ++.+++.+++.+|++|+++.|++.|+++|
T Consensus        89 ~~------------~~~~~~~~ll~~A~~~~i~~L~~~C~~~L  119 (120)
T 2if5_A           89 LT------------VSTANVGDILSAARLLEIPAVSHVCADLL  119 (120)
T ss_dssp             CC------------CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             Cc------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            97            67778999999999999999999999987


No 9  
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.92  E-value=4.1e-25  Score=188.84  Aligned_cols=138  Identities=27%  Similarity=0.406  Sum_probs=108.8

Q ss_pred             eeeeeEEEEEEcCcccccc---CCCCCeeecCceeec--CeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceE
Q 015877           31 ETVNGSHQFKITGYSLSKG---LGIGKYIASDTFMVG--GYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDV   99 (399)
Q Consensus        31 ~~~~~~~~w~I~nfs~~~~---~~~g~~~~S~~f~~g--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~   99 (399)
                      .++.+.|+|+|+|||.+++   .+.|.++.|++|.+|  ||+|+|++||+|++.+ .++|+|+||.|.++      +|++
T Consensus        20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~-~~~~lSlyL~l~~~~~d~~l~W~v   98 (178)
T 4gjh_A           20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSG-KGTHLSLYFVVMRGEFDSLLQWPF   98 (178)
T ss_dssp             CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGG-TTTEEEEEEEEBCCTTGGGSCSSC
T ss_pred             cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCC-CCCEEEEEEEEecCCCCcccCCce
Confidence            3567999999999999986   456669999999999  9999999999998743 57999999999653      4999


Q ss_pred             EEEEEEEEeeCCCCccceeeeccccceecCCeeee----ccCccccceeeeecccccc--cccccCCeEEEEEEeeeec
Q 015877          100 RALFELTLLDQSGKERHKVHSHFGRTLESGPYTLK----YRGSMWGYKRFFKRTLLEQ--SDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       100 ~a~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~--~~~l~~d~l~i~~~i~v~~  172 (399)
                      .|+|+++|+|+.+...+... .+..  ....+.|.    ..+.+|||++|+++++|++  ++||+||+++|+|+|.|.+
T Consensus        99 ~a~~~l~Lldq~~~~~~~~~-~~~~--~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~  174 (178)
T 4gjh_A           99 RQRVTLMLLDQSGKKNHIVE-TFKA--DPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTD  174 (178)
T ss_dssp             CCEEEEEECCTTSSCCCEEE-EEEC--CTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTT
T ss_pred             EEEEEEEEEcCCCCcceeEE-eecc--CCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEecC
Confidence            99999999999876532211 1000  00112332    2356899999999999976  8999999999999998754


No 10 
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.91  E-value=7e-25  Score=177.30  Aligned_cols=112  Identities=26%  Similarity=0.303  Sum_probs=105.6

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEe-eCCCHHHHHHHhhhhccC
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKV-EDMEAPVFKALLHFIYWD  265 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~f~~~L~~iYt~  265 (399)
                      ++.+.+++.+++.++.+|||+|.++|++|+|||+||+++|+||++||.+++.| ....|.+ +++++++|+.+|+|+|||
T Consensus        13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg   91 (127)
T 1r29_A           13 ASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTS   91 (127)
T ss_dssp             HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCC
Confidence            45688899999999999999999999999999999999999999999999988 7789999 999999999999999999


Q ss_pred             CCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhc
Q 015877          266 SLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCE  311 (399)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~  311 (399)
                      .+.            ++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus        92 ~~~------------~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~  125 (127)
T 1r29_A           92 RLN------------LREGNIMAVMATAMYLQMEHVVDTCRKFIKA  125 (127)
T ss_dssp             CCC------------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             CcC------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence            997            6778899999999999999999999999975


No 11 
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.91  E-value=1.4e-24  Score=170.74  Aligned_cols=104  Identities=31%  Similarity=0.437  Sum_probs=92.2

Q ss_pred             hhhcCCcceEEEEEcC----eEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchh
Q 015877          197 LLESGKRTDVNFEVNG----ETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEE  272 (399)
Q Consensus       197 l~~~~~~sDv~~~v~~----~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~  272 (399)
                      |++++.+|||+|.|++    ++|+|||.||+++|+||++||.+++.|+. ..|.++++++++|+.+|+|+||+.++    
T Consensus         2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~----   76 (109)
T 2vkp_A            2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEID----   76 (109)
T ss_dssp             CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCC----
T ss_pred             cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCcc----
Confidence            5788999999999998    89999999999999999999999998888 89999999999999999999999997    


Q ss_pred             hccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccC
Q 015877          273 LTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDV  313 (399)
Q Consensus       273 ~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~  313 (399)
                              ++.+++.+++.+|++|+++.|+..|+++|.+.+
T Consensus        77 --------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l  109 (109)
T 2vkp_A           77 --------LEADTVLATLYAAKKYIVPALAKACVNFLETSL  109 (109)
T ss_dssp             --------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             --------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence                    667889999999999999999999999997653


No 12 
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.91  E-value=4.9e-25  Score=180.74  Aligned_cols=119  Identities=20%  Similarity=0.264  Sum_probs=109.0

Q ss_pred             CCCCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEee-CCCHHHHHHHhhhhc
Q 015877          185 IPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVE-DMEAPVFKALLHFIY  263 (399)
Q Consensus       185 ~p~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~~~f~~~L~~iY  263 (399)
                      .+++.+.++|.+++.++.+|||+|.|+|++|+|||+||+++|+||++||.+++.+.  ..|.++ ++++++|+.+|+|+|
T Consensus        18 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Y   95 (138)
T 2z8h_A           18 VHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAY   95 (138)
T ss_dssp             SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhc
Confidence            34567889999999999999999999999999999999999999999999988663  578885 999999999999999


Q ss_pred             cCCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhH
Q 015877          264 WDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINT  317 (399)
Q Consensus       264 t~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n  317 (399)
                      ||.+.            ++.+++.+++.+|++|+++.|+..|+++|.+.++.+|
T Consensus        96 tg~~~------------i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn  137 (138)
T 2z8h_A           96 TAKLI------------LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST  137 (138)
T ss_dssp             HSCCC------------CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred             CCCcc------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence            99997            6778899999999999999999999999999887765


No 13 
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.91  E-value=2.4e-24  Score=181.16  Aligned_cols=137  Identities=25%  Similarity=0.380  Sum_probs=104.2

Q ss_pred             eeeEEEEEEcCcccccc-CCCCC--eeecCceeec--CeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceEEE
Q 015877           33 VNGSHQFKITGYSLSKG-LGIGK--YIASDTFMVG--GYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDVRA  101 (399)
Q Consensus        33 ~~~~~~w~I~nfs~~~~-~~~g~--~~~S~~f~~g--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~~a  101 (399)
                      ..++|+|+|+|||.+++ ++.|+  ++.|++|.+|  ||+|+|++||+|++.+.+++|+|+||.+.++      +|++.|
T Consensus         3 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a   82 (160)
T 1lb6_A            3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQG   82 (160)
T ss_dssp             CCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCS
T ss_pred             cCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceee
Confidence            56899999999999975 45677  8999999999  9999999999997643247899999998652      399999


Q ss_pred             EEEEEEeeCCCCccceeeeccccceecCC--eeee-----ccCccccceeeeecccccccccccCCeEEEEEEeeeec
Q 015877          102 LFELTLLDQSGKERHKVHSHFGRTLESGP--YTLK-----YRGSMWGYKRFFKRTLLEQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       102 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~--~~f~-----~~~~~~G~~~fi~~~~L~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      +|+++|+|+.+... +..  ..+.+...+  ..|.     ..+.+|||+.|+++++|+.++||+||+++|+|+|.|+.
T Consensus        83 ~~~l~lldq~~~~~-~~~--~~~~~~~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~  157 (160)
T 1lb6_A           83 TIRLTILDQSEAPV-RQN--HEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF  157 (160)
T ss_dssp             EEEEEECCCSCTTS-CCC--EEEEEECCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred             eEEEEEEcCCCccc-ccc--ceEEeecCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence            99999999986531 110  001111110  1121     11337999999999999989999999999999999875


No 14 
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.91  E-value=1.2e-23  Score=176.14  Aligned_cols=127  Identities=15%  Similarity=0.256  Sum_probs=101.9

Q ss_pred             eeeEEEEEEcCccccccCCCCCeeecCceeecCeEEEEEEecCCCCCCCCCCeEEEEEEeeCC----CceEEEEEEEEEe
Q 015877           33 VNGSHQFKITGYSLSKGLGIGKYIASDTFMVGGYAWAIYFYPDGKSVEDNAAYVSLFIALASE----GTDVRALFELTLL  108 (399)
Q Consensus        33 ~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~~gg~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~----~w~~~a~~~~~ll  108 (399)
                      ..++|+|+|+|||.++     +.+.|++|.+||++|+|++||+|+...++++|+|+||.|...    +|++.|+|+++|+
T Consensus        17 ~~~~~~w~I~nfS~~~-----~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~   91 (155)
T 2foj_A           17 SEATFQFTVERFSRLS-----ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKII   91 (155)
T ss_dssp             SEEEEEEEESSGGGCC-----SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEEC
T ss_pred             CCcEEEEEECChhhcC-----CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEE
Confidence            4689999999999995     579999999999999999999997531257899999999653    4999999999999


Q ss_pred             eCCCCccceeeeccccceecCCeeeeccCccccceeeeeccccc--ccccccCCeEEEEEEeeeec
Q 015877          109 DQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLLE--QSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L~--~~~~l~~d~l~i~~~i~v~~  172 (399)
                      |+++.......        ...+.|.....+|||++|++|++|.  .++||.||+|+|+|+|.|.+
T Consensus        92 ~~~~~~~~~~~--------~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~  149 (155)
T 2foj_A           92 NYRDDEKSFSR--------RISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA  149 (155)
T ss_dssp             CSSCGGGCEEE--------EEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECC
T ss_pred             cCCCCcceEEe--------ccEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeC
Confidence            99876532111        1124565556789999999999995  68999999999999999965


No 15 
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.91  E-value=1.8e-24  Score=172.64  Aligned_cols=108  Identities=24%  Similarity=0.274  Sum_probs=99.5

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSL  267 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~  267 (399)
                      +.+.+++.+++.++.+|||+|.++|++|+|||.||+++|+||++||.+++    ...|.++++++++|+.+|+|+|||.+
T Consensus         9 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~   84 (119)
T 3b84_A            9 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHL   84 (119)
T ss_dssp             HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence            46778999999999999999999999999999999999999999998865    56899999999999999999999999


Q ss_pred             CCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhc
Q 015877          268 PDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCE  311 (399)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~  311 (399)
                      +            ++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus        85 ~------------~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~  116 (119)
T 3b84_A           85 A------------LTSGNRDQVLLAARELRVPEAVELCQSFKPK  116 (119)
T ss_dssp             C------------CCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred             c------------cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            7            6677899999999999999999999998864


No 16 
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.90  E-value=2.2e-24  Score=177.99  Aligned_cols=110  Identities=25%  Similarity=0.347  Sum_probs=99.0

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCC--CCcceEEeeCCCHHHHHHHhhhhccC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKD--QNTQCIKVEDMEAPVFKALLHFIYWD  265 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e--~~~~~i~l~~~~~~~f~~~L~~iYt~  265 (399)
                      +.+.+++.+++.++.+|||+|.|+|++|+|||+||+++|+||++||.+++.+  +....|.++++++++|+.+|+|+|||
T Consensus        32 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg  111 (144)
T 2ppi_A           32 ARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSG  111 (144)
T ss_dssp             HHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCC
Confidence            4678899999999999999999999999999999999999999999988765  56778999999999999999999999


Q ss_pred             CCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHH
Q 015877          266 SLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANL  309 (399)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l  309 (399)
                      .+.            ++.+++.+++.+|++|+++.|++.|+++|
T Consensus       112 ~~~------------i~~~~v~~ll~~A~~l~i~~L~~~C~~~L  143 (144)
T 2ppi_A          112 QIR------------LNEDTIQDVVQAADLLLLTDLKTLCCEFL  143 (144)
T ss_dssp             CCC------------CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred             CCC------------CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence            997            67788999999999999999999999876


No 17 
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.90  E-value=6.6e-24  Score=168.71  Aligned_cols=107  Identities=23%  Similarity=0.320  Sum_probs=99.3

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEee--CCCHHHHHHHhhhhccC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVE--DMEAPVFKALLHFIYWD  265 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~  265 (399)
                      +.+.+++.+++.++.+|||+|.++|++|+|||.||+++|+||++||.++    ....|.++  ++++++|+.+|+|+|||
T Consensus         7 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~   82 (116)
T 2vpk_A            7 EHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTG   82 (116)
T ss_dssp             HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCC
Confidence            4677899999999999999999999999999999999999999999876    35678888  99999999999999999


Q ss_pred             CCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHh
Q 015877          266 SLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLC  310 (399)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~  310 (399)
                      .++            ++.+++.+++.+|++|+++.|++.|+++|.
T Consensus        83 ~~~------------~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~  115 (116)
T 2vpk_A           83 TLN------------LDSWNVKEIHQAADYLKVEEVVTKCKIKME  115 (116)
T ss_dssp             CCC------------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred             Ccc------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            997            667789999999999999999999999985


No 18 
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.90  E-value=4.8e-24  Score=170.77  Aligned_cols=109  Identities=26%  Similarity=0.316  Sum_probs=100.7

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCC
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDS  266 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~  266 (399)
                      ++.+.+.+.+++.++.+|||+|.++|++|+|||.||+++|+||++||.++     ...|.++++++++|+.+|+|+|||.
T Consensus        12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~   86 (121)
T 1buo_A           12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTAT   86 (121)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence            35678899999999999999999999999999999999999999999763     5689999999999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhcc
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCED  312 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~  312 (399)
                      ++            ++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus        87 ~~------------~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~  120 (121)
T 1buo_A           87 LQ------------AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI  120 (121)
T ss_dssp             CC------------CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             cC------------CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence            97            66788999999999999999999999999754


No 19 
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.90  E-value=2.8e-24  Score=175.40  Aligned_cols=113  Identities=23%  Similarity=0.250  Sum_probs=98.0

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSL  267 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~  267 (399)
                      ..+.+.|.+++.++.+|||+|.|+|++|+|||.||+++|+||++||.+++    ...|.++++++++|+.+|+|+||+.+
T Consensus        10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~   85 (135)
T 2yy9_A           10 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHL   85 (135)
T ss_dssp             HHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCC
Confidence            46788999999999999999999999999999999999999999998866    56799999999999999999999999


Q ss_pred             CCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChh
Q 015877          268 PDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAIN  316 (399)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~  316 (399)
                      .            ++.+++.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus        86 ~------------i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~  122 (135)
T 2yy9_A           86 A------------LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ  122 (135)
T ss_dssp             C------------CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred             C------------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence            7            677889999999999999999999999998766543


No 20 
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.90  E-value=4.2e-24  Score=184.64  Aligned_cols=136  Identities=26%  Similarity=0.394  Sum_probs=106.1

Q ss_pred             eeeEEEEEEcCcccccc-CCCCC--eeecCceeec--CeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceEEE
Q 015877           33 VNGSHQFKITGYSLSKG-LGIGK--YIASDTFMVG--GYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDVRA  101 (399)
Q Consensus        33 ~~~~~~w~I~nfs~~~~-~~~g~--~~~S~~f~~g--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~~a  101 (399)
                      +.++|.|+|+|||.++. ++.|+  .+.|++|.+|  ||+|+|++||+|++. ++++|+|+||.+.++      +|++.|
T Consensus        38 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~wp~~a  116 (192)
T 2gkw_A           38 YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFKQ  116 (192)
T ss_dssp             CSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred             cCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCC-CCCCEEEEEEEEecCCCCccCCCcEEE
Confidence            57899999999999974 44566  6999999999  999999999999864 367999999998642      499999


Q ss_pred             EEEEEEeeCCCCccceeeeccccceecCCeeee----ccCccccceeeeecccccccccccCCeEEEEEEeeeec
Q 015877          102 LFELTLLDQSGKERHKVHSHFGRTLESGPYTLK----YRGSMWGYKRFFKRTLLEQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       102 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      +|+|+|+|+.+.+.+.... +...  .....|.    ..+.+|||+.|+++++|+++|||+||+++|+|+|.|..
T Consensus       117 ~~~l~lldq~~~~~~~~~~-~~~~--~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~~  188 (192)
T 2gkw_A          117 KVTLMLMDQGSSRRHLGDA-FKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD  188 (192)
T ss_dssp             CEEEEECCCSTTCCCEEEE-ECCC--TTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCTT
T ss_pred             EEEEEEECCCCCccceEEE-EecC--CCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcCC
Confidence            9999999998875432111 1000  0011231    12457999999999999878999999999999997754


No 21 
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.89  E-value=9.1e-24  Score=182.93  Aligned_cols=136  Identities=21%  Similarity=0.323  Sum_probs=105.7

Q ss_pred             eeeeEEEEEEcCcccccc-CCCCC--eeecCceee--cCeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceEE
Q 015877           32 TVNGSHQFKITGYSLSKG-LGIGK--YIASDTFMV--GGYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDVR  100 (399)
Q Consensus        32 ~~~~~~~w~I~nfs~~~~-~~~g~--~~~S~~f~~--gg~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~~  100 (399)
                      ...++|+|+|+|||.+++ .+.|+  ++.||+|.+  ||++|+|++||+|++.+ +++|+|+||.+.++      +|++.
T Consensus        40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~-~~~~lSlyL~l~~~~~~~~~~W~~~  118 (192)
T 1ca9_A           40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTG-RGTHLSLFFVVMKGPNDALLRWPFN  118 (192)
T ss_dssp             CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGG-TTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred             ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCC-CCCEEEEEEEEccCCCCCcCCCceE
Confidence            367899999999999875 34565  799999999  99999999999997643 67999999998653      49999


Q ss_pred             EEEEEEEeeCCCCccceeeeccccceecCCeeee----ccCccccceeeeeccccc-ccccccCCeEEEEEEeeeec
Q 015877          101 ALFELTLLDQSGKERHKVHSHFGRTLESGPYTLK----YRGSMWGYKRFFKRTLLE-QSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       101 a~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~-~~~~l~~d~l~i~~~i~v~~  172 (399)
                      |+|+++|+|+++.....  ..+...  .....|.    ..+.+|||+.|+++++|+ .++||+||+++|+|+|.|.+
T Consensus       119 a~~~l~lldq~~~~~~~--~~~~~~--~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~~  191 (192)
T 1ca9_A          119 QKVTLMLLDQNNREHVI--DAFRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG  191 (192)
T ss_dssp             CCEEEEECCTTSSCCEE--EEECCC--TTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCTT
T ss_pred             EEEEEEEECCCCCceee--EeeccC--CchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEecC
Confidence            99999999998873211  010000  0011121    235689999999999998 78999999999999998853


No 22 
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.89  E-value=2.4e-23  Score=176.63  Aligned_cols=135  Identities=20%  Similarity=0.312  Sum_probs=104.0

Q ss_pred             eeeEEEEEEcCccccccC-CCCC--eeecCcee--ecCeEEEEEEecCCCCCCCCCCeEEEEEEeeC------CCceEEE
Q 015877           33 VNGSHQFKITGYSLSKGL-GIGK--YIASDTFM--VGGYAWAIYFYPDGKSVEDNAAYVSLFIALAS------EGTDVRA  101 (399)
Q Consensus        33 ~~~~~~w~I~nfs~~~~~-~~g~--~~~S~~f~--~gg~~W~l~~~p~g~~~~~~~~~lsl~l~~~~------~~w~~~a  101 (399)
                      ..++|+|+|+|||.+++. ..|+  .+.||+|.  +||++|+|++||+|++.+ +++|+|+||.+.+      .+|++.|
T Consensus        17 ~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~-~~~~lSlyL~l~~~~~~~~~~w~~~~   95 (168)
T 1d00_A           17 YDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTG-RGTHLSLFFVVMKGPNDALLRWPFNQ   95 (168)
T ss_dssp             SSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGG-TTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred             cCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCC-CCcEEEEEEEEecCCCCccCCCceEE
Confidence            678999999999999863 3566  49999996  799999999999997643 5799999999865      2599999


Q ss_pred             EEEEEEeeCCCCccceeeeccccceecCCeeee----ccCccccceeeeeccccccc-ccccCCeEEEEEEeeeec
Q 015877          102 LFELTLLDQSGKERHKVHSHFGRTLESGPYTLK----YRGSMWGYKRFFKRTLLEQS-DYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       102 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~~-~~l~~d~l~i~~~i~v~~  172 (399)
                      +|+++|+|+++.... .. .+...  .....|.    ..+.+|||+.|+++++|++. +||+||+|+|+|+|.|.+
T Consensus        96 ~~~l~ll~q~~~~~~-~~-~~~~~--~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~~  167 (168)
T 1d00_A           96 KVTLMLLDQNNREHV-ID-AFRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG  167 (168)
T ss_dssp             CEEEEECCTTSSCCE-EE-EECCC--TTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCTT
T ss_pred             EEEEEEECCCCCccc-ee-ccccC--cchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEecC
Confidence            999999999875421 11 00000  0011221    23567999999999999765 999999999999998753


No 23 
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.88  E-value=2.6e-23  Score=165.94  Aligned_cols=107  Identities=25%  Similarity=0.333  Sum_probs=98.4

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCC
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDS  266 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~  266 (399)
                      .+.+.+.+.+++.++.+|||+|.++|++|+|||.||+++|+||++||.+     ....|.++++++++|+.+|+|+|||.
T Consensus        11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~   85 (119)
T 2q81_A           11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAK   85 (119)
T ss_dssp             HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence            3567889999999999999999999999999999999999999999975     34578889999999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHh
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLC  310 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~  310 (399)
                      +.            ++.+++.+++.+|++|+++.|++.|+++|.
T Consensus        86 ~~------------i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~  117 (119)
T 2q81_A           86 LS------------LSPENVDDVLAVATFLQMQDIITACHALKS  117 (119)
T ss_dssp             CC------------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             Cc------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            97            667789999999999999999999999984


No 24 
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.88  E-value=2e-24  Score=173.76  Aligned_cols=111  Identities=23%  Similarity=0.304  Sum_probs=99.3

Q ss_pred             CCCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEe-eCCCHHHHHHHhhhhcc
Q 015877          186 PPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKV-EDMEAPVFKALLHFIYW  264 (399)
Q Consensus       186 p~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l-~~~~~~~f~~~L~~iYt  264 (399)
                      +++.+.+++.+++.++.+|||+|.|+|++|+|||.|||++|+||++||.+++.++  ..|.+ +++++++|+.+|+|+||
T Consensus        12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYt   89 (124)
T 2ihc_A           12 HSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYT   89 (124)
T ss_dssp             HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcC
Confidence            4567889999999999999999999999999999999999999999999988664  57888 49999999999999999


Q ss_pred             CCCCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHh
Q 015877          265 DSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLC  310 (399)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~  310 (399)
                      |.+.            ++.+++.+++.+|++|+++.|++.|+++|.
T Consensus        90 g~~~------------i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~  123 (124)
T 2ihc_A           90 AKLI------------LSKENVDEVCKCVEFLSVHNIEESCFQFLK  123 (124)
T ss_dssp             SEEE------------EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred             CCcc------------cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence            9986            677889999999999999999999998763


No 25 
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.88  E-value=2e-23  Score=185.17  Aligned_cols=137  Identities=24%  Similarity=0.371  Sum_probs=106.4

Q ss_pred             eeeeEEEEEEcCcccccc-CCCC--CeeecCceeec--CeEEEEEEecCCCCCCCCCCeEEEEEEeeCC------CceEE
Q 015877           32 TVNGSHQFKITGYSLSKG-LGIG--KYIASDTFMVG--GYAWAIYFYPDGKSVEDNAAYVSLFIALASE------GTDVR  100 (399)
Q Consensus        32 ~~~~~~~w~I~nfs~~~~-~~~g--~~~~S~~f~~g--g~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~------~w~~~  100 (399)
                      +..++|.|+|+|||.++. ++.|  .++.|++|.+|  ||+|+|++||+|++. +.++|+|+||.+.++      +|++.
T Consensus        73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~Wp~~  151 (228)
T 1flk_A           73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFK  151 (228)
T ss_dssp             CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGG-GTTTEEEEEECCBCCTTTTSSCSSCC
T ss_pred             CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCC-CCCCEEEEEEEEecCCccccCCCcEE
Confidence            367899999999999875 3344  48999999999  999999999999864 367999999998642      49999


Q ss_pred             EEEEEEEeeCCCCccceeeeccccceecCCeee----eccCccccceeeeecccccccccccCCeEEEEEEeeeec
Q 015877          101 ALFELTLLDQSGKERHKVHSHFGRTLESGPYTL----KYRGSMWGYKRFFKRTLLEQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       101 a~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f----~~~~~~~G~~~fi~~~~L~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      |+|+|+|+|+.+.+.+.... +...  .....|    ...+.+|||+.|+++++|+++|||+||+++|+|+|.|..
T Consensus       152 a~~~l~lldq~~~~~~~~~~-~~~~--~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~  224 (228)
T 1flk_A          152 QKVTLMLMDQGSSRRHLGDA-FKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD  224 (228)
T ss_dssp             CCEEEEECCCSSSCCCEEEE-ECCC--TTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCTT
T ss_pred             EEEEEEEEcCCCCccceeee-ecCC--CccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEccc
Confidence            99999999998775422111 0000  000112    123568999999999999888999999999999998854


No 26 
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.88  E-value=6e-24  Score=171.29  Aligned_cols=108  Identities=27%  Similarity=0.315  Sum_probs=99.9

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeC-CCHHHHHHHhhhhccCC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVED-MEAPVFKALLHFIYWDS  266 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~-~~~~~f~~~L~~iYt~~  266 (399)
                      +.+.+.+.++++++.+|||+|.|+|++|+|||.||+++|+||++||.+++.+  ...|.+++ +++++|+.+|+|+|||.
T Consensus        17 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~   94 (125)
T 3ohu_A           17 TNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAK   94 (125)
T ss_dssp             HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSE
T ss_pred             HHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCc
Confidence            5678889999999999999999999999999999999999999999998866  56899998 99999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHH
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANL  309 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l  309 (399)
                      +.            ++.+++.+++.+|++|+++.|++.|+++|
T Consensus        95 ~~------------~~~~~v~~ll~~A~~l~i~~L~~~C~~~L  125 (125)
T 3ohu_A           95 LL------------LSRENIREVIRCAEFLRMHNLEDSCFSFL  125 (125)
T ss_dssp             EE------------ECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred             eE------------ECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence            86            67788999999999999999999998653


No 27 
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.88  E-value=1.7e-23  Score=169.51  Aligned_cols=109  Identities=21%  Similarity=0.279  Sum_probs=94.1

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEee-CCCHHHHHHHhhhhccCC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVE-DMEAPVFKALLHFIYWDS  266 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~  266 (399)
                      ..+.+.+.+++.++.+|||+|.|+|++|+|||.||+++|+||++||.++    ....|.++ ++++++|+.+|+|+|||.
T Consensus        18 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~   93 (129)
T 3ga1_A           18 NSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGR   93 (129)
T ss_dssp             HHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred             HHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence            4578889999999999999999999999999999999999999999775    56789996 999999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhcc
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCED  312 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~  312 (399)
                      +.            ++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus        94 ~~------------i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~  127 (129)
T 3ga1_A           94 LS------------MNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV  127 (129)
T ss_dssp             EE------------CCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred             cc------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence            86            67778999999999999999999999999753


No 28 
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.85  E-value=5e-22  Score=158.01  Aligned_cols=102  Identities=25%  Similarity=0.254  Sum_probs=89.5

Q ss_pred             CCchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCC
Q 015877          187 PSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDS  266 (399)
Q Consensus       187 ~~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~  266 (399)
                      ...+.+.+.  ..++.+|||+|.|+|++|+|||+|||++|+||++         ....|.++++++++|+.+|+|+|||.
T Consensus        16 ~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~   84 (119)
T 3m5b_A           16 SDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGES   84 (119)
T ss_dssp             TCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence            345556664  4678999999999999999999999999999974         34678999999999999999999999


Q ss_pred             CCCchhhccCCcccchHHHHHHHHHHhhhcChHHHHHHHHHHHhc
Q 015877          267 LPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCE  311 (399)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~  311 (399)
                      +.            ++.+++.+++.+|++|+++.|++.|++.+.+
T Consensus        85 ~~------------i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~  117 (119)
T 3m5b_A           85 VE------------LQPGELRPLQEAARALGVQSLEEACWRARGD  117 (119)
T ss_dssp             EE------------ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             cC------------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence            87            7788999999999999999999999998754


No 29 
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.85  E-value=2.7e-21  Score=153.33  Aligned_cols=100  Identities=20%  Similarity=0.318  Sum_probs=92.1

Q ss_pred             CchhHhHHHhhhcCCcceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCC
Q 015877          188 SNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSL  267 (399)
Q Consensus       188 ~~l~~~l~~l~~~~~~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~  267 (399)
                      +.+.+.+.+++.++.+|||+|.|+|++|+|||.|||++|+||++||.++     ...|.++++++++|+.+|+|+|||.+
T Consensus        16 ~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~   90 (116)
T 3fkc_A           16 GSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKI   90 (116)
T ss_dssp             HHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCc
Confidence            5678889999999999999999999999999999999999999999764     56899999999999999999999999


Q ss_pred             CCchhhccCCcccchHHHHHHHHHHhhhcChHHHHH
Q 015877          268 PDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRL  303 (399)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~  303 (399)
                      +.           ++.+++.+++.+|++|+++.|++
T Consensus        91 ~~-----------~~~~~~~~ll~~A~~l~i~~L~~  115 (116)
T 3fkc_A           91 VR-----------VRSDLLDELIKSGQLLGVKFIAA  115 (116)
T ss_dssp             CS-----------CCHHHHHHHHHHHHHHTCHHHHT
T ss_pred             CC-----------CCHHHHHHHHHHHHHhCccccCc
Confidence            41           77889999999999999999874


No 30 
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.80  E-value=1.3e-19  Score=180.82  Aligned_cols=128  Identities=14%  Similarity=0.237  Sum_probs=101.7

Q ss_pred             eeeeEEEEEEcCccccccCCCCCeeecCceeecCeEEEEEEecCCCCCCCCCCeEEEEEEeeC----CCceEEEEEEEEE
Q 015877           32 TVNGSHQFKITGYSLSKGLGIGKYIASDTFMVGGYAWAIYFYPDGKSVEDNAAYVSLFIALAS----EGTDVRALFELTL  107 (399)
Q Consensus        32 ~~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~~gg~~W~l~~~p~g~~~~~~~~~lsl~l~~~~----~~w~~~a~~~~~l  107 (399)
                      ...+.|+|+|+|||.+++     .+.|++|.+||++|+|.+||+|+...++++|+|+||.|..    .+|.+.|+|+++|
T Consensus        28 ~~~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l  102 (522)
T 2f1z_A           28 RSEATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKI  102 (522)
T ss_dssp             CSEEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEE
T ss_pred             cCCcEEEEEECChhhcCC-----ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEE
Confidence            457899999999999973     7899999999999999999999753336789999999964    3599999999999


Q ss_pred             eeCCCCccceeeeccccceecCCeeeeccCccccceeeeecccc--cccccccCCeEEEEEEeeeec
Q 015877          108 LDQSGKERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVK  172 (399)
Q Consensus       108 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~~l~~d~l~i~~~i~v~~  172 (399)
                      +|+.+......        ....++|...+.+|||.+|++|++|  +.+|||.||+++|+|.|.|..
T Consensus       103 ~n~~~~~~~~~--------~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~  161 (522)
T 2f1z_A          103 INYRDDEKSFS--------RRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA  161 (522)
T ss_dssp             CCTTCGGGCEE--------EECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred             EcCCCCcccee--------ccceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence            99876543211        1223567666778999999999999  568999999999999999964


No 31 
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.45  E-value=2.9e-13  Score=112.77  Aligned_cols=114  Identities=12%  Similarity=0.146  Sum_probs=85.0

Q ss_pred             EEEEE-cCeEEehhhHHHHhcCHHHHHhhcC-CCC-CCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhh---------
Q 015877          206 VNFEV-NGETFAAHKLVLAARSPVFRAQLYG-PMK-DQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEEL---------  273 (399)
Q Consensus       206 v~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~-~~~-e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~---------  273 (399)
                      |+|.. +|+.|.|||.+ |+.|+||++||.+ ++. |+....|++++++..+++.+++|+|+..-......         
T Consensus         3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~   81 (159)
T 2ast_A            3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT   81 (159)
T ss_dssp             EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred             EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence            67765 79999999999 8999999999987 666 66677899999999999999999998773211000         


Q ss_pred             ccCCc-----ccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHH
Q 015877          274 TGMSS-----KWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVAT  320 (399)
Q Consensus       274 ~~~~~-----~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~  320 (399)
                      .....     ..++..++.+|+.||+++++..|.++|..++...+...++.+
T Consensus        82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~ee  133 (159)
T 2ast_A           82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE  133 (159)
T ss_dssp             CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHH
T ss_pred             hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH
Confidence            00000     026788999999999999999999999999976555444433


No 32 
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.32  E-value=1e-11  Score=123.00  Aligned_cols=134  Identities=25%  Similarity=0.392  Sum_probs=104.4

Q ss_pred             eeeeeeEEEEEEcCccccccCCCCCeeecCcee-ecCeEEEEEEecCCCCCCCCCCeEEEEEEeeCCC------ceE-EE
Q 015877           30 TETVNGSHQFKITGYSLSKGLGIGKYIASDTFM-VGGYAWAIYFYPDGKSVEDNAAYVSLFIALASEG------TDV-RA  101 (399)
Q Consensus        30 ~~~~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~-~gg~~W~l~~~p~g~~~~~~~~~lsl~l~~~~~~------w~~-~a  101 (399)
                      ++..+..+.|+|.||+++.+. .+..+.||+|+ ..||.++|.+|+++      ..|+|+|+++.+++      ||+ .-
T Consensus       401 t~G~CP~~vw~i~nfs~~l~~-~~~~~~Sp~Fys~~GY~~~v~l~~~~------~~~~~~~~~l~sG~~D~~L~WP~~~~  473 (592)
T 4gwm_A          401 SETRCPHHIWHIRNFTQFIGS-PNGTLYSPPFYSSKGYAFQIYLNLAH------VTNAGIYFHLISGANDDQLQWPCPWQ  473 (592)
T ss_dssp             ESSCCCSEEEEECSCGGGTTC-TTCEEECCCEECTTSCEEEEEEECCS------SSEEEEEEEEECCTTGGGSCSSCCSE
T ss_pred             eeCCCCCCceeecCHHHhhcC-CCCceeCCCccCCCCeEEEEEEecCC------CceEEEEEEEecCCCCCCccCCCCCC
Confidence            444567899999999998764 46689999998 45999999999874      46899999998853      998 47


Q ss_pred             EEEEEEeeCCCCccceeeeccccceecCCe-------------------------eeeccCccccceeeeeccccccccc
Q 015877          102 LFELTLLDQSGKERHKVHSHFGRTLESGPY-------------------------TLKYRGSMWGYKRFFKRTLLEQSDY  156 (399)
Q Consensus       102 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-------------------------~f~~~~~~~G~~~fi~~~~L~~~~~  156 (399)
                      ++++.|+||+.+...+++..  +++.+.+.                         +...++.+|||+.|++.+.|....|
T Consensus       474 q~t~~llDQ~pd~~~rms~~--~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~r~f  551 (592)
T 4gwm_A          474 QATMTLLDQNPDIRQRMSNQ--RSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKSRDF  551 (592)
T ss_dssp             EEEEEECCCCSSGGGCCCEE--EEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTSTTS
T ss_pred             EEEEEEeCCCCChHhcCcee--EEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhhcCc
Confidence            89999999988776665432  23322211                         0113456799999999999988899


Q ss_pred             ccCCeEEEEEEeeeec
Q 015877          157 LKGDCLSVHCSVGVVK  172 (399)
Q Consensus       157 l~~d~l~i~~~i~v~~  172 (399)
                      |+||++.|.++++=+.
T Consensus       552 iK~d~~~i~~~~eD~~  567 (592)
T 4gwm_A          552 IKGDDVYILLTVEDIS  567 (592)
T ss_dssp             SBTTBEEEEEEEEECG
T ss_pred             ccCCeEEEEEEEEeCc
Confidence            9999999999997665


No 33 
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.16  E-value=5.3e-11  Score=90.27  Aligned_cols=83  Identities=18%  Similarity=0.256  Sum_probs=64.3

Q ss_pred             EEEEE-cCeEEehhhHHHHhcCHHHHHhhcC--CCCCCCcceEEeeCCCHHHHHHHhhhhc-----c---CCCCCchhhc
Q 015877          206 VNFEV-NGETFAAHKLVLAARSPVFRAQLYG--PMKDQNTQCIKVEDMEAPVFKALLHFIY-----W---DSLPDMEELT  274 (399)
Q Consensus       206 v~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iY-----t---~~~~~~~~~~  274 (399)
                      |+++. +|++|.|||.+ |+.|++|++||.+  .+.|+....|+++++++.+++.+++|+|     +   +.++      
T Consensus         4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~------   76 (97)
T 4ajy_C            4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIP------   76 (97)
T ss_dssp             EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCC------
T ss_pred             EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCC------
Confidence            45554 78999999999 9999999999976  6677778899999999999999999999     5   3343      


Q ss_pred             cCCcccchHHHHHHHHHHhhhcCh
Q 015877          275 GMSSKWASTLMSQHLLAAADRYGL  298 (399)
Q Consensus       275 ~~~~~~~~~~~~~~ll~~A~~~~~  298 (399)
                         .|.++.+++.+|+.||++++.
T Consensus        77 ---~~~i~~~~l~eLl~AAnyL~~   97 (97)
T 4ajy_C           77 ---EFPIAPEIALELLMAANFLDC   97 (97)
T ss_dssp             ---CCCCCGGGHHHHHHHHHHHTC
T ss_pred             ---cCcCCHHHHHHHHHHHhhhCC
Confidence               123677899999999999863


No 34 
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13  E-value=7.1e-12  Score=96.72  Aligned_cols=80  Identities=10%  Similarity=-0.020  Sum_probs=68.8

Q ss_pred             hccCChhHHHHHHHHHHHcCchHHHHHHHHhccCcCcHHHHhcccchHHHHHHhhhchhhHhHhhhHHHhhHHHHHhcCc
Q 015877          310 CEDVAINTVATTLALAEQHHCFQLKSVCLKFVAMPENLRGGYSIDSIHIQQIYIVSNNFVITLCFLVWKEKKLFYELCRP  389 (399)
Q Consensus       310 ~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~~v~~~~~f~~L~~~l~~~~l~~~~~~~~~~E~~v~~~~~~W  389 (399)
                      .+.++++||+.++.+|+.|++..|++.|.+||.  .||.++.++++|.+|+.......|.-    .+.+|.+||+++++|
T Consensus         5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~--~nF~~v~~~~eFl~L~~~~L~~lL~s----dv~~E~~vf~av~~W   78 (105)
T 2eqx_A            5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAK--THLAQLQNTEEFLHLPHRLLTDIISD----GVPCSQNPTEAIEAW   78 (105)
T ss_dssp             CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH--HTCHHHHTSHHHHHSCHHHHHHHHHT----CEETTSCHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH--HHHHHHHhcccHhhCCHHHHHHHHcC----CCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999  99999999999999985444444321    167999999999999


Q ss_pred             ccccCC
Q 015877          390 IKCSSI  395 (399)
Q Consensus       390 i~~n~~  395 (399)
                      ++|+..
T Consensus        79 v~~d~~   84 (105)
T 2eqx_A           79 INFNKE   84 (105)
T ss_dssp             HHTTHH
T ss_pred             HHcCHH
Confidence            999853


No 35 
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.07  E-value=2.5e-10  Score=92.81  Aligned_cols=111  Identities=12%  Similarity=0.108  Sum_probs=84.3

Q ss_pred             EEEEE-cCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhh---------cc
Q 015877          206 VNFEV-NGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEEL---------TG  275 (399)
Q Consensus       206 v~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~---------~~  275 (399)
                      |++.. +|+.|.+|+.+ |..|++|++||.+..    ...|++++++..+++.+++|+|...-......         ..
T Consensus         4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~   78 (141)
T 1fs1_B            4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD   78 (141)
T ss_dssp             EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred             EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence            66766 78999999998 899999999996521    45799999999999999999987552110000         00


Q ss_pred             CCc-----ccchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHHHH
Q 015877          276 MSS-----KWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATT  321 (399)
Q Consensus       276 ~~~-----~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~~~  321 (399)
                      ...     ..++..++.+|+.||+++++..|.++|.+++...+...+..++
T Consensus        79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eei  129 (141)
T 1fs1_B           79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI  129 (141)
T ss_dssp             --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence            000     0267889999999999999999999999999877766665543


No 36 
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.92  E-value=3.1e-10  Score=94.32  Aligned_cols=110  Identities=11%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             EEEEE-cCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCch----------hhc
Q 015877          206 VNFEV-NGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDME----------ELT  274 (399)
Q Consensus       206 v~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~----------~~~  274 (399)
                      |+|.. +|+.|.+|+.+ |..|++|++||.+..   ....|++++++..+++.+++|+|+..-....          ...
T Consensus         6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~   81 (160)
T 2p1m_A            6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD   81 (160)
T ss_dssp             --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred             EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence            56664 79999999998 889999999997643   2347999999999999999999986532100          000


Q ss_pred             cCCcc-----cchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHHH
Q 015877          275 GMSSK-----WASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVA  319 (399)
Q Consensus       275 ~~~~~-----~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~~  319 (399)
                      ....|     .++..++.+|+.||+++++..|.++|..++...+...+..
T Consensus        82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~e  131 (160)
T 2p1m_A           82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPE  131 (160)
T ss_dssp             -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHH
T ss_pred             hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHH
Confidence            01111     3677889999999999999999999999998877444433


No 37 
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.45  E-value=8.8e-07  Score=73.90  Aligned_cols=113  Identities=16%  Similarity=0.177  Sum_probs=79.4

Q ss_pred             eEEEEE-cCeEEehhhHHHHhcCHHHHHhhcCCCC----CCCcceEEeeCCCHHHHHHHhhhhccCCCCC-ch--h----
Q 015877          205 DVNFEV-NGETFAAHKLVLAARSPVFRAQLYGPMK----DQNTQCIKVEDMEAPVFKALLHFIYWDSLPD-ME--E----  272 (399)
Q Consensus       205 Dv~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~-~~--~----  272 (399)
                      -|+|+. +|+.|.+++.+ |.+|..++.|+.....    +.....|+|++++..+++.+++|++.-.-.. ..  +    
T Consensus         8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~   86 (169)
T 3v7d_A            8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR   86 (169)
T ss_dssp             EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred             eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence            466665 78999999998 7799999999965322    1233689999999999999999997543211 00  0    


Q ss_pred             -hccCCcc-----cchHHHHHHHHHHhhhcChHHHHHHHHHHHhccCChhHH
Q 015877          273 -LTGMSSK-----WASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTV  318 (399)
Q Consensus       273 -~~~~~~~-----~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~~~~n~  318 (399)
                       ......|     .++...+.+|+.||+++++..|..+|+..+...+...+.
T Consensus        87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktp  138 (169)
T 3v7d_A           87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSP  138 (169)
T ss_dssp             -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCH
T ss_pred             ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCH
Confidence             0001111     367788999999999999999999999988654444443


No 38 
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.42  E-value=7.5e-07  Score=67.32  Aligned_cols=92  Identities=18%  Similarity=0.288  Sum_probs=70.4

Q ss_pred             eEEEEE-cCeEEehhhHHHHhcCHHHHHhhcCCCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCc--hhhccCCcccc
Q 015877          205 DVNFEV-NGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDM--EELTGMSSKWA  281 (399)
Q Consensus       205 Dv~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~--~~~~~~~~~~~  281 (399)
                      -|++.. +|+.|.+++.+ |..|.+++.|+.+++ +.....|++++++..+++.+++|+|.-.-...  ...+....|.+
T Consensus         5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v   82 (99)
T 1hv2_A            5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI   82 (99)
T ss_dssp             EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred             EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence            466766 89999999997 889999999998755 55557899999999999999999985331000  00111223458


Q ss_pred             hHHHHHHHHHHhhhcCh
Q 015877          282 STLMSQHLLAAADRYGL  298 (399)
Q Consensus       282 ~~~~~~~ll~~A~~~~~  298 (399)
                      +...+.+|+.||+++++
T Consensus        83 d~~~lfeLi~AAnyLdI   99 (99)
T 1hv2_A           83 PTEMSLELLLAADYLSI   99 (99)
T ss_dssp             CHHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHhCc
Confidence            88999999999999875


No 39 
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.36  E-value=1.6e-06  Score=66.61  Aligned_cols=95  Identities=17%  Similarity=0.244  Sum_probs=74.2

Q ss_pred             eEEEEEcCeEEehhhHHHHhcC-HHHHHhhcCCCC----CCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcc
Q 015877          205 DVNFEVNGETFAAHKLVLAARS-PVFRAQLYGPMK----DQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSK  279 (399)
Q Consensus       205 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~  279 (399)
                      -|+|.|||+.|...+..|+... .+|.+||.+...    .....++-+ |-++..|+.+|+|+.+|.+.....       
T Consensus         7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~-------   78 (107)
T 3drz_A            7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-------   78 (107)
T ss_dssp             EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT-------
T ss_pred             EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC-------
Confidence            4788999999999999999775 578889876421    113345655 689999999999999999863221       


Q ss_pred             cchHHHHHHHHHHhhhcChHHHHHHHHHHHhc
Q 015877          280 WASTLMSQHLLAAADRYGLERLRLLCEANLCE  311 (399)
Q Consensus       280 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~  311 (399)
                       +   ....++.-|++|+++.|.+.|++.|.+
T Consensus        79 -~---~~~~l~~Ea~fy~l~~L~~~l~~~i~~  106 (107)
T 3drz_A           79 -L---AEEGVLEEAEFYNITSLIKLVKDKIRE  106 (107)
T ss_dssp             -S---CHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             -C---CHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence             1   236789999999999999999998753


No 40 
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.29  E-value=6.3e-07  Score=67.34  Aligned_cols=91  Identities=16%  Similarity=0.215  Sum_probs=64.4

Q ss_pred             EEEEE-cCeEEehhhHHHHhcCHHHHHhhcC--CCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcccch
Q 015877          206 VNFEV-NGETFAAHKLVLAARSPVFRAQLYG--PMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWAS  282 (399)
Q Consensus       206 v~~~v-~~~~~~aHk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~  282 (399)
                      |++.. +|++|.+++.+ |..|.+++.|+.+  .+.|.....|++++++..+++.+++|+|.-.-.. ...+....|.++
T Consensus         3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~-~~~~~i~~w~vd   80 (96)
T 2fnj_C            3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYT-NSSTEIPEFPIA   80 (96)
T ss_dssp             EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHH-SCCSCCCCCCCC
T ss_pred             EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccC-CCcccCCCcccC
Confidence            55655 79999999997 8899999999975  3346556789999999999999999997532100 000111223477


Q ss_pred             HHHHHHHHHHhhhcCh
Q 015877          283 TLMSQHLLAAADRYGL  298 (399)
Q Consensus       283 ~~~~~~ll~~A~~~~~  298 (399)
                      ...+.+|+.||+++++
T Consensus        81 ~~~l~eLi~AAnyLdI   96 (96)
T 2fnj_C           81 PEIALELLMAANFLDC   96 (96)
T ss_dssp             TTTHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCc
Confidence            7889999999999874


No 41 
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.92  E-value=1.9e-05  Score=60.79  Aligned_cols=92  Identities=16%  Similarity=0.192  Sum_probs=64.8

Q ss_pred             eEEEE-EcCeEEehhhHHHHhcCHHHHHhhcC--CCCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcccc
Q 015877          205 DVNFE-VNGETFAAHKLVLAARSPVFRAQLYG--PMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWA  281 (399)
Q Consensus       205 Dv~~~-v~~~~~~aHk~iLa~~S~~F~~~~~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~  281 (399)
                      -|+|. .+|+.|.+++. +|..|..++.|+..  .+.+.....|++++++..+++.+++|++.-.-... .......|.+
T Consensus        18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~-~~~~i~~w~v   95 (112)
T 1vcb_B           18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN-SSTEIPEFPI   95 (112)
T ss_dssp             EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSS-CSSCCCCCCC
T ss_pred             EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccC-CcCCCCCccc
Confidence            46666 37999999999 47899999999974  33455556899999999999999999964321000 0011123458


Q ss_pred             hHHHHHHHHHHhhhcCh
Q 015877          282 STLMSQHLLAAADRYGL  298 (399)
Q Consensus       282 ~~~~~~~ll~~A~~~~~  298 (399)
                      +...+.+|+.||+++++
T Consensus        96 d~~~lfeLi~AAnyLdI  112 (112)
T 1vcb_B           96 APEIALELLMAANFLDC  112 (112)
T ss_dssp             CHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHhCc
Confidence            88999999999999875


No 42 
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.29  E-value=0.00047  Score=58.31  Aligned_cols=95  Identities=17%  Similarity=0.250  Sum_probs=72.9

Q ss_pred             eEEEEEcCeEEehhhHHHHhcC-HHHHHhhcCCCC----CCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcc
Q 015877          205 DVNFEVNGETFAAHKLVLAARS-PVFRAQLYGPMK----DQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSK  279 (399)
Q Consensus       205 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~~~~~~~----e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~  279 (399)
                      =|+|.|||..|...+..|.... .+|..||.+...    .....++-+ |-++..|+.+|+|+-+|.+.....       
T Consensus        13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~-------   84 (202)
T 3drx_A           13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-------   84 (202)
T ss_dssp             EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-------
T ss_pred             EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-------
Confidence            4778899999999999998664 478888865421    112345555 679999999999999999863321       


Q ss_pred             cchHHHHHHHHHHhhhcChHHHHHHHHHHHhc
Q 015877          280 WASTLMSQHLLAAADRYGLERLRLLCEANLCE  311 (399)
Q Consensus       280 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~  311 (399)
                       +.   ...++.-|++|+++.|.+.|++.|.+
T Consensus        85 -~~---~~~l~eEA~FygL~~Lv~~l~~~i~e  112 (202)
T 3drx_A           85 -LA---EEGVLEEAEFYNITSLIKLVKDKIRE  112 (202)
T ss_dssp             -SC---HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             -CC---HHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence             22   24688999999999999999998853


No 43 
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.50  E-value=0.0028  Score=48.81  Aligned_cols=85  Identities=15%  Similarity=0.129  Sum_probs=61.1

Q ss_pred             eEEEEEcCeEEehhhHHHHhcC-HHHHHhhcCCC-CCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcccch
Q 015877          205 DVNFEVNGETFAAHKLVLAARS-PVFRAQLYGPM-KDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWAS  282 (399)
Q Consensus       205 Dv~~~v~~~~~~aHk~iLa~~S-~~F~~~~~~~~-~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~  282 (399)
                      =|+|-|||..|...+..|.... ..|.+|+.+.. ......++-+ |-++..|+.+|+|+-+|.+.....        + 
T Consensus         6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~--------~-   75 (115)
T 3kvt_A            6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD--------V-   75 (115)
T ss_dssp             EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS--------S-
T ss_pred             EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc--------c-
Confidence            4788999999999999998763 34555654321 1223455655 579999999999999998753221        1 


Q ss_pred             HHHHHHHHHHhhhcChHHH
Q 015877          283 TLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       283 ~~~~~~ll~~A~~~~~~~L  301 (399)
                        ....++.-|++|+++..
T Consensus        76 --~~~~~~~Ea~fy~i~~~   92 (115)
T 3kvt_A           76 --CGPLFEEELEFWGLDSN   92 (115)
T ss_dssp             --CHHHHHHHHHHHTCCGG
T ss_pred             --cHHHHHHHHHHhCCChH
Confidence              24678899999999764


No 44 
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.93  E-value=0.02  Score=44.57  Aligned_cols=83  Identities=17%  Similarity=0.171  Sum_probs=59.0

Q ss_pred             ceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCC----CCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcc
Q 015877          204 TDVNFEVNGETFAAHKLVLAARSPVFRAQLYGP----MKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSK  279 (399)
Q Consensus       204 sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~----~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~  279 (399)
                      .-|+|-|||..|...+..|.....   .+|...    .......++-+ |-++..|+.+|+|+-+|.+.....       
T Consensus        13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~-------   81 (124)
T 1s1g_A           13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-------   81 (124)
T ss_dssp             CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-------
T ss_pred             CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-------
Confidence            458889999999999999986432   223221    11123345555 569999999999999998763221       


Q ss_pred             cchHHHHHHHHHHhhhcChHHH
Q 015877          280 WASTLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       280 ~~~~~~~~~ll~~A~~~~~~~L  301 (399)
                       +   .+..++.-|++|+++.+
T Consensus        82 -~---~~~~l~~Ea~fy~i~~l   99 (124)
T 1s1g_A           82 -E---CISAYDDELAFYGILPE   99 (124)
T ss_dssp             -S---CHHHHHHHHHHTTCCGG
T ss_pred             -c---CHHHHHHHHHHcCCChH
Confidence             1   36788999999999876


No 45 
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.36  E-value=0.019  Score=42.93  Aligned_cols=84  Identities=18%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             EEEEEcCeEEehhhHHHHhcCH-HHHHhhcC-CCCCCCcceEEeeCCCHHHHHHHhhhhcc-CCCCCchhhccCCcccch
Q 015877          206 VNFEVNGETFAAHKLVLAARSP-VFRAQLYG-PMKDQNTQCIKVEDMEAPVFKALLHFIYW-DSLPDMEELTGMSSKWAS  282 (399)
Q Consensus       206 v~~~v~~~~~~aHk~iLa~~S~-~F~~~~~~-~~~e~~~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~~  282 (399)
                      |+|-|||..|...+..|+..-. .+.+|+.. ........++-+ |-++..|+.+|+|+-+ |.+.....        + 
T Consensus         3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~--------~-   72 (100)
T 1t1d_A            3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN--------V-   72 (100)
T ss_dssp             EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT--------S-
T ss_pred             EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC--------C-
Confidence            6789999999999999975421 23333321 111223456666 6799999999999998 78753221        1 


Q ss_pred             HHHHHHHHHHhhhcChHHH
Q 015877          283 TLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       283 ~~~~~~ll~~A~~~~~~~L  301 (399)
                        .+..++.-|++|+++.+
T Consensus        73 --~~~~~~~Ea~fy~i~~~   89 (100)
T 1t1d_A           73 --PLDVFSEEIKFYELGEN   89 (100)
T ss_dssp             --CHHHHHHHHHHTTCCHH
T ss_pred             --CHHHHHHHHHHcCCCHH
Confidence              35788999999999763


No 46 
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.09  E-value=0.0086  Score=45.29  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=56.9

Q ss_pred             EEEEEcCeEEehhhHHHHhcCHHHHHhhcCCC----CCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCcccc
Q 015877          206 VNFEVNGETFAAHKLVLAARSPVFRAQLYGPM----KDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWA  281 (399)
Q Consensus       206 v~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~~----~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~  281 (399)
                      |+|-|||..|...+..|.....   .||....    ......++-+ |-++..|+.+|+|+-+|.+.....        +
T Consensus         2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~--------~   69 (105)
T 1nn7_A            2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH--------E   69 (105)
T ss_dssp             EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT--------S
T ss_pred             EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC--------c
Confidence            6789999999999999986532   2232210    1112345555 569999999999999998753221        1


Q ss_pred             hHHHHHHHHHHhhhcChHHH
Q 015877          282 STLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       282 ~~~~~~~ll~~A~~~~~~~L  301 (399)
                         .+..++.-|++|+++.+
T Consensus        70 ---~~~~l~~Ea~fy~i~~l   86 (105)
T 1nn7_A           70 ---CISAYDEELAFFGLIPE   86 (105)
T ss_dssp             ---CHHHHHHHHHHHTCCSC
T ss_pred             ---CHHHHHHHHHHcCCCHH
Confidence               36778999999999875


No 47 
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.91  E-value=0.04  Score=43.85  Aligned_cols=84  Identities=17%  Similarity=0.168  Sum_probs=59.4

Q ss_pred             cceEEEEEcCeEEehhhHHHHhcCHHHHHhhcCC----CCCCCcceEEeeCCCHHHHHHHhhhhccCCCCCchhhccCCc
Q 015877          203 RTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGP----MKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSS  278 (399)
Q Consensus       203 ~sDv~~~v~~~~~~aHk~iLa~~S~~F~~~~~~~----~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~  278 (399)
                      ..-|+|.|||..|...+..|.....   .||...    .......++-+ |-++..|+.+|+|+-+|.+.....      
T Consensus        34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~------  103 (140)
T 2nz0_B           34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY------  103 (140)
T ss_dssp             CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT------
T ss_pred             CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC------
Confidence            3468889999999999999986432   233221    01122345555 569999999999999998763221      


Q ss_pred             ccchHHHHHHHHHHhhhcChHHH
Q 015877          279 KWASTLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       279 ~~~~~~~~~~ll~~A~~~~~~~L  301 (399)
                        +   .+..++.-|++|+++.+
T Consensus       104 --~---~~~~l~eEa~fy~i~~l  121 (140)
T 2nz0_B          104 --E---CISAYDDELAFYGILPE  121 (140)
T ss_dssp             --S---CHHHHHHHHHHHTCCGG
T ss_pred             --c---CHHHHHHHHHHcCCChH
Confidence              1   36778999999999876


No 48 
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=82.78  E-value=0.68  Score=34.52  Aligned_cols=30  Identities=27%  Similarity=0.390  Sum_probs=28.3

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++.+|++|+++.|++.|.+++.
T Consensus        77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~  106 (109)
T 2vkp_A           77 LEADTVLATLYAAKKYIVPALAKACVNFLE  106 (109)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            677899999999999999999999999987


No 49 
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=79.29  E-value=1.4  Score=34.37  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=29.1

Q ss_pred             cCChhHHHHHHHHHHHcCchHHHHHHHHhccCcCcHHH
Q 015877          312 DVAINTVATTLALAEQHHCFQLKSVCLKFVAMPENLRG  349 (399)
Q Consensus       312 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~~  349 (399)
                      .++.+|+..++..|+.+++..|++.|.+|+.  +++..
T Consensus        86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~--~~l~~  121 (135)
T 2yy9_A           86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQP--QTSVG  121 (135)
T ss_dssp             CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred             CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHH--HhccC
Confidence            3677899999999999999999999999999  66643


No 50 
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=77.84  E-value=1.5  Score=34.40  Aligned_cols=33  Identities=12%  Similarity=0.284  Sum_probs=30.2

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhccCcCcH
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVAMPENL  347 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~  347 (399)
                      ++.+|+..++..|+.+++..|++.|.+||.  .++
T Consensus       101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~--~~l  133 (138)
T 2z8h_A          101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLK--FKF  133 (138)
T ss_dssp             CCTTTHHHHHHHHHHHTCGGGHHHHHHHTT--CCC
T ss_pred             cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH--Hhc
Confidence            677899999999999999999999999998  554


No 51 
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=77.41  E-value=2  Score=32.62  Aligned_cols=30  Identities=17%  Similarity=0.249  Sum_probs=28.1

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+|+..++..|+.+++..|++.|.+|+.
T Consensus        88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~  117 (119)
T 2q81_A           88 LSPENVDDVLAVATFLQMQDIITACHALKS  117 (119)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            677899999999999999999999999986


No 52 
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=75.71  E-value=2.3  Score=32.59  Aligned_cols=30  Identities=17%  Similarity=0.263  Sum_probs=28.2

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|+.+++..|++.|.++|.
T Consensus        95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~  124 (127)
T 1r29_A           95 LREGNIMAVMATAMYLQMEHVVDTCRKFIK  124 (127)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            577899999999999999999999999987


No 53 
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=75.69  E-value=2.1  Score=32.48  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=27.5

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+|+..++..|+.+++..|++.|.+|+.
T Consensus        86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~  115 (119)
T 3b84_A           86 LTSGNRDQVLLAARELRVPEAVELCQSFKP  115 (119)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred             cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            577899999999999999999999999997


No 54 
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.38  E-value=1.6  Score=32.42  Aligned_cols=32  Identities=13%  Similarity=-0.058  Sum_probs=29.4

Q ss_pred             chHHHHHHHHHHhhhcChHHHHHHHHHHHhcc
Q 015877          281 ASTLMSQHLLAAADRYGLERLRLLCEANLCED  312 (399)
Q Consensus       281 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~  312 (399)
                      ++..+...++.+|+.|+++.|...|.+++.++
T Consensus         8 L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~n   39 (105)
T 2eqx_A            8 VQVGNCLQVMWLADRHSDPELYTAAKHCAKTH   39 (105)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            67789999999999999999999999999764


No 55 
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=75.37  E-value=2.5  Score=31.84  Aligned_cols=30  Identities=10%  Similarity=0.014  Sum_probs=27.9

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|+.+++..|++.|.+|+.
T Consensus        86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~  115 (116)
T 2vpk_A           86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME  115 (116)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            577899999999999999999999999985


No 56 
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=73.83  E-value=3.2  Score=31.34  Aligned_cols=29  Identities=21%  Similarity=0.296  Sum_probs=27.1

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFV  341 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i  341 (399)
                      ++.+++..++..|+.+++..|++.|.+|+
T Consensus        91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L  119 (120)
T 2if5_A           91 VSTANVGDILSAARLLEIPAVSHVCADLL  119 (120)
T ss_dssp             CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            57789999999999999999999999986


No 57 
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=71.09  E-value=2.9  Score=33.02  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=27.1

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|+.+++..|++.|.+||.
T Consensus       115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~  144 (144)
T 2ppi_A          115 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE  144 (144)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred             CCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence            577899999999999999999999999873


No 58 
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=70.82  E-value=3.9  Score=30.97  Aligned_cols=30  Identities=23%  Similarity=0.252  Sum_probs=28.0

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|+.+++..|++.|.+++.
T Consensus        89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~  118 (121)
T 1buo_A           89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLE  118 (121)
T ss_dssp             CCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            577899999999999999999999999986


No 59 
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=69.37  E-value=3.4  Score=40.34  Aligned_cols=85  Identities=16%  Similarity=0.089  Sum_probs=56.4

Q ss_pred             eEEEEEcCeEEehhhHHHHhcCHH-HHHhhc-CCCCCCCcceEEeeCCCHHHHHHHhhhhcc-CCCCCchhhccCCcccc
Q 015877          205 DVNFEVNGETFAAHKLVLAARSPV-FRAQLY-GPMKDQNTQCIKVEDMEAPVFKALLHFIYW-DSLPDMEELTGMSSKWA  281 (399)
Q Consensus       205 Dv~~~v~~~~~~aHk~iLa~~S~~-F~~~~~-~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~  281 (399)
                      =|+|-|||..|...+..|...-.- +..++. ........+++-+ |-++..|+.+|+|+.+ |.+.....        +
T Consensus        53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~--------~  123 (514)
T 2r9r_B           53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN--------V  123 (514)
T ss_dssp             EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT--------S
T ss_pred             EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc--------c
Confidence            478889999999999999754211 111111 0111223445655 6799999999999999 88753221        1


Q ss_pred             hHHHHHHHHHHhhhcChHHH
Q 015877          282 STLMSQHLLAAADRYGLERL  301 (399)
Q Consensus       282 ~~~~~~~ll~~A~~~~~~~L  301 (399)
                         ....+++-|++|+++.+
T Consensus       124 ---~~~~~~~E~~f~~i~~~  140 (514)
T 2r9r_B          124 ---PLDIFSEEIRFYELGEE  140 (514)
T ss_dssp             ---CHHHHHHHHHHTTCCHH
T ss_pred             ---cHHHHHHHHHhcCCCHH
Confidence               24567888999998764


No 60 
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=64.92  E-value=5.6  Score=30.17  Aligned_cols=31  Identities=10%  Similarity=0.124  Sum_probs=27.9

Q ss_pred             cCChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          312 DVAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       312 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      .++.+|+..++..|+.+++..|++.|.+++.
T Consensus        86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~  116 (119)
T 3m5b_A           86 ELQPGELRPLQEAARALGVQSLEEACWRARG  116 (119)
T ss_dssp             EECGGGHHHHHHHHHHTTCHHHHHHHHHHC-
T ss_pred             CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            3578999999999999999999999999986


No 61 
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=61.20  E-value=4.5  Score=32.65  Aligned_cols=33  Identities=15%  Similarity=0.063  Sum_probs=28.8

Q ss_pred             chHHHHHHHHHHhhhcChHHHHHHHHHHHhccC
Q 015877          281 ASTLMSQHLLAAADRYGLERLRLLCEANLCEDV  313 (399)
Q Consensus       281 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~  313 (399)
                      ++.+++..++.+|++|+++.|+..|.+++.+++
T Consensus       132 l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~  164 (172)
T 3htm_A          132 LSVENAAEILILADLHSADQLKTQAVDFINYHA  164 (172)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            345678999999999999999999999998754


No 62 
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=59.80  E-value=5.3  Score=31.13  Aligned_cols=30  Identities=20%  Similarity=0.151  Sum_probs=26.1

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|+.+++..|++.|.+++.
T Consensus        91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~  120 (145)
T 4eoz_A           91 NLDKMADDLLAAADKYALERLKVMCEDALC  120 (145)
T ss_dssp             TGGGTHHHHHHHHHHTTCHHHHHHHHCC--
T ss_pred             CcHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            456789999999999999999999999998


No 63 
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=57.78  E-value=1.2  Score=34.13  Aligned_cols=32  Identities=28%  Similarity=0.340  Sum_probs=24.5

Q ss_pred             eeeeeeEEEEEEcCccccccCCCCCeeecCceee
Q 015877           30 TETVNGSHQFKITGYSLSKGLGIGKYIASDTFMV   63 (399)
Q Consensus        30 ~~~~~~~~~w~I~nfs~~~~~~~g~~~~S~~f~~   63 (399)
                      +-+.+|.+.|+|.+|+..|  +.|.++.|=.|.+
T Consensus         7 pv~~~gd~vwkIs~F~~RK--peGty~nsvsFnI   38 (133)
T 3v0r_A            7 PVTTEGDYVWKISEFYGRK--PEGTYYNSLGFNI   38 (133)
T ss_dssp             SSCCCCTTEEEEEEEEEEE--TTSSSCSEEEEEE
T ss_pred             ccccCCceEEEeeeeeeEc--CCCCceeeEEEEE
Confidence            3446899999999999988  4577777766654


No 64 
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=51.40  E-value=2.9  Score=32.18  Aligned_cols=31  Identities=6%  Similarity=0.005  Sum_probs=23.3

Q ss_pred             cCChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          312 DVAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       312 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      .++.+++..++..|+.+++..|++.|.+|+.
T Consensus        95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~  125 (129)
T 3ga1_A           95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL  125 (129)
T ss_dssp             ECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred             ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            4678899999999999999999999999987


No 65 
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=49.06  E-value=1.9  Score=32.99  Aligned_cols=30  Identities=13%  Similarity=0.313  Sum_probs=27.0

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+|+..++..|+.+++..|++.|.+|+.
T Consensus        94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~  123 (124)
T 2ihc_A           94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK  123 (124)
T ss_dssp             EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred             cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence            567899999999999999999999999875


No 66 
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=48.89  E-value=52  Score=26.08  Aligned_cols=52  Identities=17%  Similarity=-0.045  Sum_probs=38.4

Q ss_pred             HHHHHHhccCChhHHHHHHHHHHHcCchHHHHHHHHhccCcCcHHHHhcccchHHHHHHh
Q 015877          304 LCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLKFVAMPENLRGGYSIDSIHIQQIYI  363 (399)
Q Consensus       304 ~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~~~v~~~~~f~~L~~~l  363 (399)
                      -..+|+  .++.+++.+++..|...+...|.+.|-++++      ..++...-.++...+
T Consensus        87 wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va------~~i~gkt~eeir~~f  138 (159)
T 2ast_A           87 WDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA------NMIKGKTPEEIRKTF  138 (159)
T ss_dssp             HHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH------HHHSSCCHHHHHHHT
T ss_pred             HHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCCHHHHHHHc
Confidence            334445  3789999999999999999999999999997      333334445555543


No 67 
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=48.47  E-value=8.9  Score=34.41  Aligned_cols=33  Identities=15%  Similarity=0.063  Sum_probs=28.8

Q ss_pred             chHHHHHHHHHHhhhcChHHHHHHHHHHHhccC
Q 015877          281 ASTLMSQHLLAAADRYGLERLRLLCEANLCEDV  313 (399)
Q Consensus       281 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~~  313 (399)
                      ++..++..++.+|++|+++.|+..|.++|..++
T Consensus       272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~  304 (312)
T 3hqi_A          272 LSVENAAEILILADLHSADQLKTQAVDFINYHA  304 (312)
T ss_dssp             CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            345678999999999999999999999998754


No 68 
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=40.91  E-value=79  Score=24.47  Aligned_cols=60  Identities=15%  Similarity=0.062  Sum_probs=42.1

Q ss_pred             chHHHHHHHHHHhhhcCh---------------HHHHHHHHHHHhccCChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          281 ASTLMSQHLLAAADRYGL---------------ERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       281 ~~~~~~~~ll~~A~~~~~---------------~~L~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++...+..++.-+....-               ..+..--.+|+  .++.+++.+++..|...+...|.+.|-++++
T Consensus        44 V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA  118 (141)
T 1fs1_B           44 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVA  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            556666666666654441               12233333444  3899999999999999999999999999988


No 69 
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=39.41  E-value=22  Score=18.03  Aligned_cols=22  Identities=23%  Similarity=0.386  Sum_probs=17.5

Q ss_pred             HHHHHHHHcCchHHHHHHHHhc
Q 015877          320 TTLALAEQHHCFQLKSVCLKFV  341 (399)
Q Consensus       320 ~~l~~A~~~~~~~L~~~~~~~i  341 (399)
                      .++-+|.+|+.++|...|+.-.
T Consensus         3 kvmcyaqrhsspellrrcldnc   24 (26)
T 2plx_B            3 KVMCYAQRHSSPELLRRCLDNC   24 (26)
T ss_dssp             HHHHHHBCCCCHHHHHHHHHHH
T ss_pred             eEEeehhhcCCHHHHHHHHhcc
Confidence            4566888999999999988653


No 70 
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=37.56  E-value=2.7  Score=32.08  Aligned_cols=30  Identities=17%  Similarity=0.334  Sum_probs=26.2

Q ss_pred             cCChhHHHHHHHHHHHcCchHHHHHHHHhc
Q 015877          312 DVAINTVATTLALAEQHHCFQLKSVCLKFV  341 (399)
Q Consensus       312 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i  341 (399)
                      .++.+++..++..|+.+++..|++.|.+|+
T Consensus        96 ~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L  125 (125)
T 3ohu_A           96 LLSRENIREVIRCAEFLRMHNLEDSCFSFL  125 (125)
T ss_dssp             EECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred             EECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence            357789999999999999999999887764


No 71 
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=35.62  E-value=18  Score=31.26  Aligned_cols=31  Identities=19%  Similarity=0.366  Sum_probs=27.9

Q ss_pred             cCChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          312 DVAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       312 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      .++.+++..++..|..+++..|++.|.+|+.
T Consensus        98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~  128 (256)
T 3hve_A           98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLE  128 (256)
T ss_dssp             CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             cccHhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence            3677899999999999999999999999997


No 72 
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=28.78  E-value=29  Score=30.41  Aligned_cols=30  Identities=30%  Similarity=0.513  Sum_probs=28.1

Q ss_pred             CChhHHHHHHHHHHHcCchHHHHHHHHhcc
Q 015877          313 VAINTVATTLALAEQHHCFQLKSVCLKFVA  342 (399)
Q Consensus       313 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~  342 (399)
                      ++.+++..++..|..+++..|++.|.+++.
T Consensus       107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~  136 (279)
T 3i3n_A          107 VSTGSVHEVLELADRFLLIRLKEFCGEFLK  136 (279)
T ss_dssp             EETTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence            567899999999999999999999999997


Done!