Query 015882
Match_columns 399
No_of_seqs 403 out of 4143
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:10:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.8E-33 9.6E-38 241.4 18.6 158 27-200 6-164 (169)
2 1oy3_D Transcription factor in 100.0 2.5E-31 8.5E-36 246.5 19.9 182 4-201 23-254 (282)
3 2rfm_A Putative ankyrin repeat 100.0 1.2E-31 4E-36 235.4 14.9 166 14-195 24-190 (192)
4 3aji_A 26S proteasome non-ATPa 100.0 1.2E-30 3.9E-35 235.3 21.7 180 4-200 20-200 (231)
5 3hra_A Ankyrin repeat family p 100.0 7.7E-31 2.6E-35 231.4 19.6 175 4-195 19-201 (201)
6 2f8y_A Notch homolog 1, transl 100.0 2.1E-30 7E-35 232.4 21.5 166 19-200 19-186 (223)
7 1yyh_A HN1;, notch 1, ankyrin 100.0 6.5E-31 2.2E-35 241.0 18.4 180 4-200 37-218 (253)
8 2dzn_A Probable 26S proteasome 100.0 3.3E-30 1.1E-34 231.7 21.5 183 4-201 16-204 (228)
9 3aji_A 26S proteasome non-ATPa 100.0 1.6E-30 5.6E-35 234.3 18.8 177 3-197 53-230 (231)
10 4b93_B Ankyrin repeat domain-c 100.0 2.1E-31 7.2E-36 247.0 13.2 174 5-196 68-243 (269)
11 3v31_A Ankyrin repeat family A 100.0 1.4E-30 4.7E-35 223.3 17.4 160 24-199 2-162 (167)
12 2rfa_A Transient receptor pote 100.0 1.3E-30 4.4E-35 235.3 18.0 183 4-201 17-226 (232)
13 2f8y_A Notch homolog 1, transl 100.0 1.4E-30 4.8E-35 233.5 17.7 180 3-200 38-219 (223)
14 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-30 4.6E-35 221.9 15.3 158 23-197 3-162 (162)
15 2y1l_E Darpin-8.4; hydrolase-i 100.0 3E-30 1E-34 221.9 17.6 161 19-195 8-169 (169)
16 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-30 8.1E-35 234.5 17.8 168 17-200 37-212 (236)
17 3b7b_A Euchromatic histone-lys 100.0 1.4E-29 4.7E-34 229.2 22.3 179 4-200 25-205 (237)
18 1k1a_A B-cell lymphoma 3-encod 100.0 8.9E-30 3.1E-34 230.7 21.0 182 4-201 23-212 (241)
19 2xai_A ASB-9, ankyrin repeat a 100.0 9.4E-30 3.2E-34 234.5 20.7 179 3-201 16-195 (261)
20 3utm_A Tankyrase-1; tankyrase, 100.0 1.6E-29 5.4E-34 241.3 22.3 185 5-200 39-308 (351)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 7.4E-30 2.5E-34 234.0 18.5 175 3-195 70-246 (253)
22 1oy3_D Transcription factor in 100.0 4.3E-30 1.5E-34 238.1 16.8 175 18-200 2-220 (282)
23 2etb_A Transient receptor pote 100.0 1.2E-30 4E-35 239.4 12.4 181 3-199 19-248 (256)
24 3v30_A DNA-binding protein rfx 100.0 5.6E-30 1.9E-34 220.5 15.3 161 25-200 2-163 (172)
25 3f6q_A Integrin-linked protein 100.0 1.4E-29 4.8E-34 219.7 17.6 165 23-202 3-168 (179)
26 3twr_A Tankyrase-2; ankyrin re 100.0 5.4E-30 1.8E-34 219.1 14.6 160 21-196 4-164 (165)
27 1ikn_D Protein (I-kappa-B-alph 100.0 3.1E-30 1E-34 233.7 13.4 173 19-201 2-180 (236)
28 4hbd_A KN motif and ankyrin re 100.0 3.8E-30 1.3E-34 239.4 14.2 165 16-196 102-274 (276)
29 3d9h_A CDNA FLJ77766, highly s 100.0 5E-29 1.7E-33 232.8 21.6 177 4-200 73-250 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 1.2E-29 4E-34 235.3 16.8 182 4-201 25-214 (269)
31 4gpm_A Engineered protein OR26 100.0 3E-29 1E-33 216.1 17.3 146 4-163 18-164 (169)
32 2pnn_A Transient receptor pote 100.0 8.5E-30 2.9E-34 236.0 14.6 168 20-201 49-263 (273)
33 1k1a_A B-cell lymphoma 3-encod 100.0 7.6E-29 2.6E-33 224.5 20.4 171 18-200 2-178 (241)
34 1awc_B Protein (GA binding pro 100.0 3.3E-29 1.1E-33 211.7 16.5 150 25-191 2-152 (153)
35 2rfa_A Transient receptor pote 100.0 4.4E-29 1.5E-33 225.2 18.2 166 24-199 2-185 (232)
36 2xai_A ASB-9, ankyrin repeat a 100.0 6.7E-29 2.3E-33 228.8 19.4 159 24-199 2-161 (261)
37 3d9h_A CDNA FLJ77766, highly s 100.0 7.5E-29 2.6E-33 231.6 20.0 166 17-199 51-217 (285)
38 3b7b_A Euchromatic histone-lys 100.0 8.1E-29 2.8E-33 224.1 19.5 168 18-200 4-172 (237)
39 3jxi_A Vanilloid receptor-rela 100.0 6.1E-30 2.1E-34 235.1 12.0 186 3-202 22-255 (260)
40 3ljn_A Hypothetical protein; a 100.0 4.1E-29 1.4E-33 241.1 17.8 182 4-198 34-270 (364)
41 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-28 8.4E-33 226.0 21.8 185 4-200 53-281 (285)
42 1s70_B 130 kDa myosin-binding 100.0 9.7E-29 3.3E-33 231.4 17.9 169 23-201 38-261 (299)
43 3kea_A K1L; tropism, ANK repea 100.0 5.4E-29 1.8E-33 232.6 15.9 174 3-200 13-189 (285)
44 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.3E-29 3.2E-33 209.3 15.3 152 25-194 2-155 (156)
45 2dzn_A Probable 26S proteasome 100.0 1.4E-28 4.9E-33 221.0 17.3 172 3-193 49-226 (228)
46 1n11_A Ankyrin; clathrin, BAND 100.0 5E-28 1.7E-32 239.1 22.1 179 4-200 193-372 (437)
47 3eu9_A Huntingtin-interacting 100.0 4.8E-28 1.6E-32 218.6 20.1 184 4-198 23-236 (240)
48 4g8k_A 2-5A-dependent ribonucl 100.0 4.1E-28 1.4E-32 231.5 20.6 188 4-200 39-301 (337)
49 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-27 4.2E-32 221.3 23.0 190 4-200 19-214 (285)
50 3kea_A K1L; tropism, ANK repea 100.0 3.5E-29 1.2E-33 233.9 12.7 176 4-201 45-224 (285)
51 3hra_A Ankyrin repeat family p 100.0 7E-28 2.4E-32 212.3 18.9 169 22-200 2-173 (201)
52 3ljn_A Hypothetical protein; a 100.0 1.4E-28 4.7E-33 237.4 15.6 168 18-197 13-198 (364)
53 2fo1_E LIN-12 protein; beta-ba 100.0 5.8E-28 2E-32 234.3 19.2 175 16-200 157-341 (373)
54 2fo1_E LIN-12 protein; beta-ba 100.0 3.3E-28 1.1E-32 236.0 17.1 178 3-198 179-372 (373)
55 1sw6_A Regulatory protein SWI6 100.0 1.4E-28 4.9E-33 234.3 13.6 166 4-177 111-325 (327)
56 1n11_A Ankyrin; clathrin, BAND 100.0 3.6E-27 1.2E-31 232.9 21.4 178 4-199 28-206 (437)
57 3v30_A DNA-binding protein rfx 100.0 1.2E-27 4.2E-32 205.8 15.1 155 4-171 16-171 (172)
58 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3E-28 1E-32 221.5 10.2 165 22-201 2-168 (239)
59 2etb_A Transient receptor pote 99.9 1.2E-27 4.1E-32 219.3 13.7 162 24-199 1-208 (256)
60 1bi7_B P16INK4A, MTS1, multipl 99.9 9.8E-28 3.3E-32 203.5 10.9 145 18-175 5-151 (156)
61 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-26 4E-31 221.4 19.6 173 4-198 72-335 (351)
62 1s70_B 130 kDa myosin-binding 99.9 2.7E-27 9.1E-32 221.6 13.1 172 4-194 54-286 (299)
63 2pnn_A Transient receptor pote 99.9 1.2E-27 4.2E-32 221.4 10.6 173 18-200 6-221 (273)
64 2vge_A RELA-associated inhibit 99.9 7.1E-29 2.4E-33 224.5 2.0 155 7-173 3-161 (229)
65 4g8k_A 2-5A-dependent ribonucl 99.9 1.6E-26 5.4E-31 220.6 17.9 164 19-203 162-332 (337)
66 2y1l_E Darpin-8.4; hydrolase-i 99.9 1E-25 3.5E-30 193.5 17.3 142 3-154 27-169 (169)
67 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.5E-26 2.2E-30 192.8 15.8 142 4-155 19-161 (162)
68 1d9s_A Cyclin-dependent kinase 99.9 1E-26 3.5E-31 192.5 10.5 130 17-155 4-135 (136)
69 3eu9_A Huntingtin-interacting 99.9 8.3E-26 2.9E-30 203.8 16.9 167 19-200 3-171 (240)
70 3jxi_A Vanilloid receptor-rela 99.9 1.2E-26 4.1E-31 213.0 10.5 166 22-199 2-212 (260)
71 3f6q_A Integrin-linked protein 99.9 5.7E-26 1.9E-30 196.9 14.1 152 4-168 19-171 (179)
72 1d9s_A Cyclin-dependent kinase 99.9 4.2E-26 1.4E-30 188.8 11.5 133 48-197 2-136 (136)
73 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-25 7E-30 188.6 15.8 139 4-153 16-155 (156)
74 1awc_B Protein (GA binding pro 99.9 3.3E-25 1.1E-29 187.0 16.4 136 4-150 16-152 (153)
75 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-25 4.1E-30 192.0 13.2 142 4-155 22-164 (165)
76 3t8k_A Uncharacterized protein 99.9 1.3E-26 4.3E-31 202.8 7.0 158 25-199 6-181 (186)
77 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-25 5.6E-30 185.2 13.2 128 19-154 8-136 (136)
78 3v31_A Ankyrin repeat family A 99.9 2.4E-25 8.4E-30 190.4 14.6 142 4-155 17-159 (167)
79 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-25 1.2E-29 179.6 14.5 124 24-155 1-125 (126)
80 2rfm_A Putative ankyrin repeat 99.9 2.9E-25 1E-29 194.5 14.1 141 4-154 49-190 (192)
81 4hbd_A KN motif and ankyrin re 99.9 2.4E-25 8.3E-30 206.9 10.4 165 22-200 73-245 (276)
82 1sw6_A Regulatory protein SWI6 99.9 6.8E-25 2.3E-29 208.8 11.7 164 27-201 99-312 (327)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.4E-24 1.5E-28 173.0 14.5 125 59-197 1-126 (126)
84 3c5r_A BARD-1, BRCA1-associate 99.9 4.5E-25 1.5E-29 182.6 7.6 128 20-155 5-133 (137)
85 2jab_A H10-2-G3; HER2, darpin, 99.9 2.6E-24 8.8E-29 178.0 12.2 127 55-195 9-136 (136)
86 3deo_A Signal recognition part 99.9 2.8E-24 9.7E-29 187.1 12.0 140 21-194 40-181 (183)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6E-25 2.1E-29 199.7 7.5 144 22-177 34-190 (239)
88 3ehr_A Osteoclast-stimulating 99.9 9.2E-25 3.1E-29 195.9 8.3 138 19-168 67-206 (222)
89 3c5r_A BARD-1, BRCA1-associate 99.9 2.5E-24 8.4E-29 178.1 9.6 127 55-195 5-132 (137)
90 3ui2_A Signal recognition part 99.9 3.5E-24 1.2E-28 195.4 11.3 143 21-197 41-185 (244)
91 3t8k_A Uncharacterized protein 99.9 1.8E-24 6E-29 189.2 6.9 136 19-166 31-185 (186)
92 1bi7_B P16INK4A, MTS1, multipl 99.9 3.4E-24 1.2E-28 181.5 8.3 133 54-201 6-140 (156)
93 3aaa_C Myotrophin, protein V-1 99.9 7.6E-24 2.6E-28 171.9 9.8 114 21-142 3-117 (123)
94 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-23 6.5E-28 196.5 11.8 137 23-177 149-295 (301)
95 2vge_A RELA-associated inhibit 99.9 3.9E-23 1.3E-27 186.7 12.9 147 41-201 1-152 (229)
96 3aaa_C Myotrophin, protein V-1 99.9 6.2E-23 2.1E-27 166.5 10.0 112 56-177 3-115 (123)
97 2aja_A Ankyrin repeat family p 99.9 1.4E-24 4.7E-29 210.2 -0.4 159 19-199 86-252 (376)
98 3deo_A Signal recognition part 99.9 3.7E-24 1.3E-28 186.3 -0.4 110 57-177 41-152 (183)
99 3jue_A Arfgap with coiled-coil 99.9 3.8E-22 1.3E-26 192.3 12.6 147 22-177 196-346 (368)
100 3ehr_A Osteoclast-stimulating 99.9 9.7E-23 3.3E-27 182.7 7.9 169 19-201 19-202 (222)
101 1dcq_A PYK2-associated protein 99.9 8.4E-21 2.9E-25 176.4 17.6 165 21-199 62-265 (278)
102 3lvq_E ARF-GAP with SH3 domain 99.9 2.7E-21 9.3E-26 194.3 14.8 134 25-176 132-275 (497)
103 3ui2_A Signal recognition part 99.9 3.9E-23 1.3E-27 188.4 0.8 139 23-177 13-153 (244)
104 2aja_A Ankyrin repeat family p 99.8 2.7E-23 9.2E-28 201.1 -2.2 139 3-155 105-249 (376)
105 1dcq_A PYK2-associated protein 99.8 6.7E-21 2.3E-25 177.1 13.1 125 25-155 130-262 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.7E-21 2.3E-25 146.6 10.8 91 24-116 1-92 (93)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.9E-20 9.8E-25 143.0 11.0 91 59-155 1-92 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.8 7.6E-21 2.6E-25 152.1 7.6 107 20-134 4-111 (115)
109 2b0o_E UPLC1; arfgap, structur 99.8 5.2E-20 1.8E-24 173.0 13.3 127 60-200 151-287 (301)
110 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-20 4.5E-25 150.7 7.8 108 55-172 4-112 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.8 8.7E-20 3E-24 183.4 13.9 129 60-202 132-270 (497)
112 3jue_A Arfgap with coiled-coil 99.8 9.1E-20 3.1E-24 175.7 11.7 130 56-199 195-328 (368)
113 2zgd_A 3 repeat synthetic anky 99.8 2.6E-18 9E-23 136.4 9.9 96 14-111 13-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.2E-17 1.1E-21 130.1 9.5 93 85-191 17-109 (110)
115 1gp8_A Protein (scaffolding pr 23.0 56 0.0019 19.5 2.2 18 29-46 17-34 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.8e-33 Score=241.37 Aligned_cols=158 Identities=24% Similarity=0.372 Sum_probs=148.0
Q ss_pred hHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCH
Q 015882 27 TSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQI 105 (399)
Q Consensus 27 TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~ 105 (399)
++|+.||..|+.++|+.|+++|+++ +.+|.+|.||||+|+..|+.++++.| +.+++++.+|.+|+||||+|+.+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv--n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV--NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCH
Confidence 5799999999999999999999999 89999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHH
Q 015882 106 DAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSN 185 (399)
Q Consensus 106 ~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~ 185 (399)
+++++|++.|++ +|.+|.+|+||||+|++.|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.
T Consensus 84 ~~v~~Ll~~gad------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga----d~~~~d~~G~TpL~~A~~----~g~~ 149 (169)
T 4gpm_A 84 EVVKLLISKGAD------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA----DVNTSDSDGRTPLDLARE----HGNE 149 (169)
T ss_dssp HHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TTCH
T ss_pred HHHHHHHHCcCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHH----cCCH
Confidence 999999999887 88999999999999999999999999999999 999999999999999999 7889
Q ss_pred HHHHHHHHccCccCC
Q 015882 186 EIGSILERAAARKQT 200 (399)
Q Consensus 186 ~i~~~L~~~ga~~~~ 200 (399)
+++++|+++||+..-
T Consensus 150 ~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 150 EVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHTC------
T ss_pred HHHHHHHHCCCCcCC
Confidence 999999999998763
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.5e-31 Score=246.48 Aligned_cols=182 Identities=20% Similarity=0.227 Sum_probs=164.3
Q ss_pred HHHHHHHhc-CCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 4 ELIELAKKD-KVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 4 e~i~~l~~~-~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
++++.|.+. ..+..++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| ..
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 100 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV--LVAERGGHTALHLACRVRAHTCACVLLQP 100 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTSCCHHHHHTTTTCHHHHHHHSSS
T ss_pred HHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCcchhHhhhcc
Confidence 567777654 334457889999999999999999999999999999999 89999999999999999999999999 65
Q ss_pred cCC-----------------------------------------------ccccccCCchHHHHHHHcCCHHHHHHHHHh
Q 015882 82 SES-----------------------------------------------LAKLTSDAETALILAVKSSQIDAFKILVEE 114 (399)
Q Consensus 82 ~~~-----------------------------------------------~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 114 (399)
+.. ++..|..|+||||+|+..|+.+++++|++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 180 (282)
T 1oy3_D 101 RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180 (282)
T ss_dssp CCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 433 667788999999999999999999999999
Q ss_pred hhcccccccccccCCC-CCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHH
Q 015882 115 TKRHNREHLFNATDKE-GNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILER 193 (399)
Q Consensus 115 ~~~~~~~~lin~~d~~-G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~ 193 (399)
|++ ++.++.. |+||||+|++.|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++++|++
T Consensus 181 g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~ 246 (282)
T 1oy3_D 181 GAD------LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA----DPTARMYGGRTPLGSALL----RPNPILARLLRA 246 (282)
T ss_dssp TCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHT----SSCHHHHHHHHH
T ss_pred CCC------CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC----CCcccccCCCCHHHHHHH----cCCcHHHHHHHH
Confidence 887 7778754 9999999999999999999999999 999999999999999998 788999999999
Q ss_pred ccCccCCC
Q 015882 194 AAARKQTA 201 (399)
Q Consensus 194 ~ga~~~~~ 201 (399)
+|++.+..
T Consensus 247 ~ga~~~~~ 254 (282)
T 1oy3_D 247 HGAPEPED 254 (282)
T ss_dssp TTCCCCCC
T ss_pred cCCCcCcC
Confidence 99998754
No 3
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.2e-31 Score=235.42 Aligned_cols=166 Identities=19% Similarity=0.128 Sum_probs=157.8
Q ss_pred CccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCC
Q 015882 14 VQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDA 92 (399)
Q Consensus 14 ~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g 92 (399)
.+.+.+.+|.+|+||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 101 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL--EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG 101 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTS
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc--ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 34556788999999999999999999999999999998 88999999999999999999999999 8899999999999
Q ss_pred chHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHH
Q 015882 93 ETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTAL 172 (399)
Q Consensus 93 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl 172 (399)
+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++.|+ +++.+|..|.||+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l 171 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGAN------VNDRNLEGETPLIVASKYGRSEIVKKLLELGA----DISARDLTGLTAE 171 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----CTTCBCTTSCBHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHH
Confidence 9999999999999999999999877 78999999999999999999999999999999 9999999999999
Q ss_pred HHHHhcCCCCcHHHHHHHHHHcc
Q 015882 173 DICKANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 173 ~~a~~~~~~~~~~~i~~~L~~~g 195 (399)
|+|+. .++.+++++|+++|
T Consensus 172 ~~A~~----~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 172 ASARI----FGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHH----TTCHHHHHHHHHHH
T ss_pred HHHHH----hCcHHHHHHHHhcc
Confidence 99998 88899999999876
No 4
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=1.2e-30 Score=235.32 Aligned_cols=180 Identities=19% Similarity=0.225 Sum_probs=166.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
+.++.+.+.. +...+..|.+|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 20 ~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 96 (231)
T 3aji_A 20 DELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV--NDKDDAGWSPLHIAASAGXDEIVKALLVKG 96 (231)
T ss_dssp HHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC--CCcCCCCCCHHHHHHHcCHHHHHHHHHHcC
Confidence 4455554443 4457888999999999999999999999999999998 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
.+++.+|..|+||||.|+..|+.+++++|++.|.+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++
T Consensus 97 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~ 166 (231)
T 3aji_A 97 AHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN------PDAKDHYDATAMHRAAAKGNLKMVHILLFYKA----STN 166 (231)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CSC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC----Ccc
Confidence 99999999999999999999999999999999877 78899999999999999999999999999999 999
Q ss_pred ccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 163 SKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 163 ~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
.+|.+|+||||+|+. .++.+++++|+++|++...
T Consensus 167 ~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 167 IQDTEGNTPLHLACD----EERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp CCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred ccCCCCCCHHHHHHH----CCCHHHHHHHHHCCCCCCC
Confidence 999999999999998 7889999999999998764
No 5
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=7.7e-31 Score=231.36 Aligned_cols=175 Identities=23% Similarity=0.262 Sum_probs=159.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh--hc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI--AC 81 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L--~~ 81 (399)
+.++.+.... +..++..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| ..
T Consensus 19 ~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 95 (201)
T 3hra_A 19 KKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI--NLQNSISDSPYLYAGAQGRTEILAYMLKHA 95 (201)
T ss_dssp HHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 4455555443 3347888999999999999999999999999999999 88999999999999999999999999 67
Q ss_pred cCCccccccCCchHHHHHHHcCCHHHHHHHHHhh-hcccccccccccCCCCCcHHHHHHHcCc-----HHHHHHHHhCCC
Q 015882 82 SESLAKLTSDAETALILAVKSSQIDAFKILVEET-KRHNREHLFNATDKEGNSLLHLAALNKL-----IVIVNLLLEGSS 155 (399)
Q Consensus 82 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~lin~~d~~G~T~LHlA~~~~~-----~~iv~~Ll~~g~ 155 (399)
+.+++..|..|+||||.|+..|+.+++++|++.+ .+ ++.+|..|+||||+|+..++ .+++++|++.|+
T Consensus 96 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga 169 (201)
T 3hra_A 96 TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED------IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169 (201)
T ss_dssp CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC------TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC
T ss_pred CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC
Confidence 7789999999999999999999999999999997 44 78999999999999999988 999999999999
Q ss_pred CCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHcc
Q 015882 156 SDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 156 ~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~g 195 (399)
+++.+|.+|+||+|+|+. .++.+++++|+++|
T Consensus 170 ----~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 170 ----DQSIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp ----CTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred ----CCCccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 999999999999999998 78899999999876
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.1e-30 Score=232.39 Aligned_cols=166 Identities=25% Similarity=0.281 Sum_probs=107.0
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccC-CccccccCCchHH
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSE-SLAKLTSDAETAL 96 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~-~~~~~d~~g~t~L 96 (399)
...|.+|+||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+. .++..+..|+|||
T Consensus 19 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 96 (223)
T 2f8y_A 19 NQTDRTGETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 96 (223)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHH
T ss_pred cccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHH
Confidence 334566666666666666666666666666666 56666666666666666666666666 4333 5666666666666
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHH
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICK 176 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~ 176 (399)
|+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..++.+++++|++.|+ +++.+|..|+||+|+|+
T Consensus 97 ~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 97 ILAARLAVEGMLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA----NKDMQNNREETPLFLAA 166 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHcCCC------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCcCHHHHHH
Confidence 666666666666666666554 55666666666666666666666666666666 66666666666666666
Q ss_pred hcCCCCcHHHHHHHHHHccCccCC
Q 015882 177 ANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 177 ~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
. .++.+++++|+++|++.+.
T Consensus 167 ~----~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 167 R----EGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp H----HTCHHHHHHHHHTTCCTTC
T ss_pred H----cCCHHHHHHHHHcCCCCcc
Confidence 5 5556666666666665544
No 7
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=6.5e-31 Score=241.04 Aligned_cols=180 Identities=23% Similarity=0.247 Sum_probs=156.6
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. .......|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 37 ~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 37 AVISDFIYQG-ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp ----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred HHHHHHHHcc-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4556665544 3344567899999999999999999999999999999 89999999999999999999999999 665
Q ss_pred C-CccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccc
Q 015882 83 E-SLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQI 161 (399)
Q Consensus 83 ~-~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~ 161 (399)
. +++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++.|+ ++
T Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~ 183 (253)
T 1yyh_A 114 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA----NK 183 (253)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC----CT
T ss_pred CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CC
Confidence 5 8899999999999999999999999999999877 88999999999999999999999999999999 99
Q ss_pred cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 162 DSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 162 ~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+.+|..|+||||+|+. .++.+++++|+++|++.+.
T Consensus 184 ~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 184 DMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp TCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCccc
Confidence 9999999999999998 7889999999999998764
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=3.3e-30 Score=231.72 Aligned_cols=183 Identities=21% Similarity=0.175 Sum_probs=164.7
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVV-EDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
++++.+.+.. +......|.+|.||||+|+..|+.+++++|++++++..... +|..|.||||+|+..|+.+++++| +.
T Consensus 16 ~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 94 (228)
T 2dzn_A 16 FKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94 (228)
T ss_dssp HHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS
T ss_pred HHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 5667776655 44556689999999999999999999999999994442255 889999999999999999999999 77
Q ss_pred c--CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCc
Q 015882 82 S--ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGS-SSDI 158 (399)
Q Consensus 82 ~--~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g-~~~~ 158 (399)
+ .+++..|.+|+||||.|+..|+.+++++|++.|.+ ++.+|..|+||||+|+..|+.+++++|++.| +
T Consensus 95 g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--- 165 (228)
T 2dzn_A 95 PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS------VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS--- 165 (228)
T ss_dssp SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC---
T ss_pred CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcc---
Confidence 6 88899999999999999999999999999999877 7899999999999999999999999999999 6
Q ss_pred ccccccccCCCCHHHHHHhcCCCCcHHHHHHHHH-HccCccCCC
Q 015882 159 IQIDSKNNQGQTALDICKANSQDSVSNEIGSILE-RAAARKQTA 201 (399)
Q Consensus 159 v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~-~~ga~~~~~ 201 (399)
+++.+|.+|+||||+|+. .++.+++++|+ ++|++.+..
T Consensus 166 -~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~~ga~~~~~ 204 (228)
T 2dzn_A 166 -AVNWQDKQGWTPLFHALA----EGHGDAAVLLVEKYGAEYDLV 204 (228)
T ss_dssp -CSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHCCCSCCB
T ss_pred -cccCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCCcc
Confidence 899999999999999999 78899999999 999987753
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=1.6e-30 Score=234.35 Aligned_cols=177 Identities=21% Similarity=0.249 Sum_probs=165.5
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
.++++.+.+... .++.+|..|+||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.
T Consensus 53 ~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 128 (231)
T 3aji_A 53 TEIVEFLLQLGV--PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV--NAVNQNGCTPLHYAASKNRHEIAVMLLEG 128 (231)
T ss_dssp HHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHhCC--CCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 367888876643 36788999999999999999999999999999999 88999999999999999999999999 99
Q ss_pred cCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccc
Q 015882 82 SESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQI 161 (399)
Q Consensus 82 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~ 161 (399)
+.+++.+|..|+||||.|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..++.+++++|++.|+ ++
T Consensus 129 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~ 198 (231)
T 3aji_A 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGA----SI 198 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CS
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC------ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC----CC
Confidence 999999999999999999999999999999999877 78899999999999999999999999999999 99
Q ss_pred cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCc
Q 015882 162 DSKNNQGQTALDICKANSQDSVSNEIGSILERAAAR 197 (399)
Q Consensus 162 ~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~ 197 (399)
+.+|.+|+||+|+|.. .++.++.++|.++|++
T Consensus 199 ~~~~~~g~t~l~~A~~----~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 199 YIENKEEKTPLQVAKG----GLGLILKRLAEGEEAS 230 (231)
T ss_dssp CCCCTTSCCHHHHSCH----HHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHh----hHHHHHHHHHcccccc
Confidence 9999999999999987 7889999999998865
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.1e-31 Score=247.02 Aligned_cols=174 Identities=21% Similarity=0.322 Sum_probs=141.7
Q ss_pred HHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccC
Q 015882 5 LIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSE 83 (399)
Q Consensus 5 ~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~ 83 (399)
+++.+.+.. ..++.+|.+|+||||+|+..|+.+++++|++.++++ +.++.+|.||+|+|+..++.++++.| +.++
T Consensus 68 ~v~~Ll~~G--advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~--~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 143 (269)
T 4b93_B 68 RLAKVPASG--LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA--GARNADQAVPLHLACQQGHFQVVKCLLDSNA 143 (269)
T ss_dssp -------CC--CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc--CccCCCCCCccccccccChHHHHHHHHHCCC
Confidence 445554433 236778899999999999999999999999999998 78899999999999999999999999 8899
Q ss_pred CccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccc
Q 015882 84 SLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDS 163 (399)
Q Consensus 84 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~ 163 (399)
+++.+|..|+||||+|+.+|+.+++++|++.|++ +|.+|..|+||||+|+..|+.+++++|++.|+ +++.
T Consensus 144 ~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga----d~~~ 213 (269)
T 4b93_B 144 KPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS------INASNNKGNTALHEAVIEKHVFVVELLLLHGA----SVQV 213 (269)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CSCC
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCC
Confidence 9999999999999999999999999999998877 78899999999999999999999999999998 8999
Q ss_pred cccCCCCHHHHHHhcCCCCcH-HHHHHHHHHccC
Q 015882 164 KNNQGQTALDICKANSQDSVS-NEIGSILERAAA 196 (399)
Q Consensus 164 ~n~~g~Tpl~~a~~~~~~~~~-~~i~~~L~~~ga 196 (399)
+|.+|+||||+|++ .+. .++.+.|...++
T Consensus 214 ~d~~G~TpL~~A~~----~~~i~~lL~~l~~~~~ 243 (269)
T 4b93_B 214 LNKRQRTAVDCAEQ----NSKIMELLQVVPSCVA 243 (269)
T ss_dssp CCTTSCCSGGGSCT----TCHHHHHTTC------
T ss_pred cCCCCCCHHHHHHh----CCcHHHHHHHHHHhch
Confidence 99999999999976 332 344444444444
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.4e-30 Score=223.27 Aligned_cols=160 Identities=20% Similarity=0.223 Sum_probs=153.0
Q ss_pred CCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHc
Q 015882 24 NGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKS 102 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~ 102 (399)
+|.||||.|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++| +.+.+++..|..|+||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI--NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 6899999999999999999999999998 89999999999999999999999999 88999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCC
Q 015882 103 SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDS 182 (399)
Q Consensus 103 g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~ 182 (399)
|+.+++++|++.+++ ++.+|.+|+||||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|+. .
T Consensus 80 ~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~----~ 145 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA----DPTIETDSGYNSMDLAVA----L 145 (167)
T ss_dssp TCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----H
T ss_pred CCHHHHHHHHHCCCC------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH----c
Confidence 999999999999877 78999999999999999999999999999999 999999999999999998 7
Q ss_pred cHHHHHHHHHHccCccC
Q 015882 183 VSNEIGSILERAAARKQ 199 (399)
Q Consensus 183 ~~~~i~~~L~~~ga~~~ 199 (399)
++.+++++|++++++..
T Consensus 146 ~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLL 162 (167)
T ss_dssp TCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 88999999999987654
No 12
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.3e-30 Score=235.29 Aligned_cols=183 Identities=22% Similarity=0.195 Sum_probs=160.6
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCC---ccCCCCCCcHHHHHHHcCCHHHHHHh-
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGS---VVEDNGLTTPLHRAAVNGDTGMIREI- 79 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~---~~~d~~g~tpLh~Aa~~g~~~iv~~L- 79 (399)
++++.+.+.. +..++.+|.+|+||||+|+..|+.+++++|+++++++.. +.+|.+|.||||+|+..|+.+++++|
T Consensus 17 ~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 95 (232)
T 2rfa_A 17 QALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALL 95 (232)
T ss_dssp HHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 5677776652 344788899999999999999999999999999887521 34577999999999999999999999
Q ss_pred hccCCcccccc-------------CCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHH
Q 015882 80 ACSESLAKLTS-------------DAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVI 146 (399)
Q Consensus 80 ~~~~~~~~~d~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~i 146 (399)
+.+.+++.++. +|+||||+|+..|+.+++++|++.|++ +|.+|.+|+||||+|+..++.++
T Consensus 96 ~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~L~~A~~~~~~~~ 169 (232)
T 2rfa_A 96 ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD------IRAQDSLGNTVLHILILQPNKTF 169 (232)
T ss_dssp HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHTCSCHHH
T ss_pred hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCChHH
Confidence 88888888765 799999999999999999999999887 88999999999999999999998
Q ss_pred H----HHHHhCCCCCcccc------cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 147 V----NLLLEGSSSDIIQI------DSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 147 v----~~Ll~~g~~~~v~~------~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
+ ++|++.|+ +. +.+|.+|+||+|+|+. .++.+++++|+++|+.....
T Consensus 170 ~~~i~~~Ll~~g~----~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 170 ACQMYNLLLSYDG----GDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp HHHHHHHHHHTTC----SCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCC----chhhhhhhccCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccchhh
Confidence 8 99999999 55 6899999999999998 78899999999999877643
No 13
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.4e-30 Score=233.48 Aligned_cols=180 Identities=17% Similarity=0.195 Sum_probs=167.1
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCC-CCCCccCCCCCCcHHHHHHHcCCHHHHHHh-h
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDP-QTGSVVEDNGLTTPLHRAAVNGDTGMIREI-A 80 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~-~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~ 80 (399)
.++++.|.+... .++..|.+|.||||+|+..|+.+++++|+++++ ++ +.++..|.||||+|+..|+.+++++| +
T Consensus 38 ~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 113 (223)
T 2f8y_A 38 SDAAKRLLEASA--DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL--DARMHDGTTPLILAARLAVEGMLEDLIN 113 (223)
T ss_dssp HHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCcHHHHHHHhCcHHHHHHHHH
Confidence 367888876643 367789999999999999999999999999988 55 88999999999999999999999999 9
Q ss_pred ccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccc
Q 015882 81 CSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQ 160 (399)
Q Consensus 81 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~ 160 (399)
.+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|++.++.+++++|++.|+ +
T Consensus 114 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~ 183 (223)
T 2f8y_A 114 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFA----N 183 (223)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----C
T ss_pred cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC----C
Confidence 9999999999999999999999999999999999877 78899999999999999999999999999999 9
Q ss_pred ccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 161 IDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 161 ~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
++.+|..|+||+|+|+. .++.+++++|+++|+....
T Consensus 184 ~~~~~~~g~t~l~~A~~----~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 184 RDITDHMDRLPRDIAQE----RMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp TTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCSSCC
T ss_pred CccccccCCCHHHHHHH----hcchHHHHHHHHcCCCccc
Confidence 99999999999999998 8899999999999987664
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.3e-30 Score=221.94 Aligned_cols=158 Identities=22% Similarity=0.275 Sum_probs=148.1
Q ss_pred CCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHH
Q 015882 23 QNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVK 101 (399)
Q Consensus 23 ~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~ 101 (399)
+...||||.|+..|+.++++.|+++++++ +.+|..|.||||+|+. |+.+++++| +.+.+++.+|..|+||||.|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV--NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT--TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc--cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45689999999999999999999999999 8899999999999999 999999999 9999999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccc-ccccccCCCCHHHHHHhcCC
Q 015882 102 SSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQ-IDSKNNQGQTALDICKANSQ 180 (399)
Q Consensus 102 ~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~-~~~~n~~g~Tpl~~a~~~~~ 180 (399)
.|+.+++++|++.|.+ ++.+|.+|+||||+|++.|+.+++++|++.|+ + ++.+|..|+||+|+|+.
T Consensus 80 ~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~g~t~l~~A~~--- 146 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQAD------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA----SNVGHRNHKGDTACDLARL--- 146 (162)
T ss_dssp HTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC----CCTTCCCTTSCCHHHHHHH---
T ss_pred cCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccC----CCCCCcCCCCCcHHHHHHH---
Confidence 9999999999999877 78999999999999999999999999999999 5 69999999999999998
Q ss_pred CCcHHHHHHHHHHccCc
Q 015882 181 DSVSNEIGSILERAAAR 197 (399)
Q Consensus 181 ~~~~~~i~~~L~~~ga~ 197 (399)
.++.+++++|+++||+
T Consensus 147 -~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 147 -YGRNEVVSLMQANGAG 162 (162)
T ss_dssp -TTCHHHHHHHHHTC--
T ss_pred -cCCHHHHHHHHHhCCC
Confidence 8889999999999985
No 15
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=3e-30 Score=221.95 Aligned_cols=161 Identities=24% Similarity=0.358 Sum_probs=149.7
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHH
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALI 97 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh 97 (399)
......+.||||.|+..|+.+++++|+++|.++ +.+|..|.||||+|+..|+.+++++| +.+.+++..|..|+||||
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMANGADV--NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLR 85 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 445667899999999999999999999999999 88999999999999999999999999 999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 98 LAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 98 ~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
.|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|+ +++.+|..|+||+|+|+.
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGAD------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA----DVNAQDKFGKTAFDISID 155 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH
Confidence 99999999999999999877 78899999999999999999999999999999 999999999999999998
Q ss_pred cCCCCcHHHHHHHHHHcc
Q 015882 178 NSQDSVSNEIGSILERAA 195 (399)
Q Consensus 178 ~~~~~~~~~i~~~L~~~g 195 (399)
.++.+++++|++.|
T Consensus 156 ----~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 156 ----NGNEDLAEILQKLN 169 (169)
T ss_dssp ----TTCHHHHHHHHTC-
T ss_pred ----hCCHHHHHHHHHcC
Confidence 78899999999876
No 16
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.4e-30 Score=234.48 Aligned_cols=168 Identities=22% Similarity=0.210 Sum_probs=156.5
Q ss_pred ccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCC------ccccc
Q 015882 17 KDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSES------LAKLT 89 (399)
Q Consensus 17 l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~------~~~~d 89 (399)
.++.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| ..+.. ++..|
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP--ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS--CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 46788999999999999999999999999999999 88999999999999999999999999 65543 57778
Q ss_pred cCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCC-CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCC
Q 015882 90 SDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDK-EGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQG 168 (399)
Q Consensus 90 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~-~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g 168 (399)
..|+||||+|+..|+.+++++|++.|++ ++.+|. .|+||||+|+..|+.+++++|++.|+ +++.+|..|
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g 184 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGAD------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA----DVNRVTYQG 184 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC----CSCCCCTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCcccCCC
Confidence 8999999999999999999999999887 788887 99999999999999999999999999 999999999
Q ss_pred CCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 169 QTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 169 ~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+||+|+|+. .++.+++++|+++|++...
T Consensus 185 ~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~ 212 (236)
T 1ikn_D 185 YSPYQLTWG----RPSTRIQQQLGQLTLENLQ 212 (236)
T ss_dssp CCGGGGCTT----SSCHHHHHHHHTTSCGGGS
T ss_pred CCHHHHHHc----cCchHHHHHHHHcchhhhh
Confidence 999999998 7889999999999997763
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.4e-29 Score=229.18 Aligned_cols=179 Identities=19% Similarity=0.214 Sum_probs=163.5
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+... .++..|.+|.||||+|+..|+.+++++|+++|.++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 25 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 100 (237)
T 3b7b_A 25 DICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV--DPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100 (237)
T ss_dssp HHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC--CCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 67777776643 36778889999999999999999999999999998 78999999999999999999999999 655
Q ss_pred -CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccc
Q 015882 83 -ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQI 161 (399)
Q Consensus 83 -~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~ 161 (399)
.+++..|..|+||||.|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++.|+ ++
T Consensus 101 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~ 170 (237)
T 3b7b_A 101 QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD------INIRDNEENICLHWAAFSGCVDIAEILLAAKC----DL 170 (237)
T ss_dssp CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC----CT
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC----CC
Confidence 78899999999999999999999999999998877 78899999999999999999999999999999 99
Q ss_pred cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 162 DSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 162 ~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+.+|..|+||||+|+. .++.+++++|+++|++...
T Consensus 171 ~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 171 HAVNIHGDSPLHIAAR----ENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp TCCCTTCCCHHHHHHH----TTCHHHHHHHHTTTCCTTC
T ss_pred CCcCCCCCCHHHHHHH----hCCHhHHHHHHHcCCCCCc
Confidence 9999999999999998 7889999999999988764
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=8.9e-30 Score=230.66 Aligned_cols=182 Identities=20% Similarity=0.192 Sum_probs=162.3
Q ss_pred HHHHHHHhc--CCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-h
Q 015882 4 ELIELAKKD--KVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-A 80 (399)
Q Consensus 4 e~i~~l~~~--~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~ 80 (399)
++++.+.+. +.+..++..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 100 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP--MALDRHGQTAAHLACEHRSPTCLRALLD 100 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345555431 123446888999999999999999999999999999999 88999999999999999999999999 6
Q ss_pred ccC----CccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccC-CCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 81 CSE----SLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATD-KEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 81 ~~~----~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d-~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
.+. +++..|..|+||||.|+..|+.+++++|++.|.+ ++.+| ..|+||||+|++.|+.+++++|++.|+
T Consensus 101 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 174 (241)
T 1k1a_A 101 SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD------IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA 174 (241)
T ss_dssp HSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC------cccccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 655 7888899999999999999999999999999877 67777 789999999999999999999999999
Q ss_pred CCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 156 SDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 156 ~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
+++.+|.+|+||||+|+. .++.+++++|+++|++.+..
T Consensus 175 ----~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 175 ----NVNAQMYSGSSALHSASG----RGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp ----CTTCBCTTSCBHHHHHHH----HTCHHHHHHHHHTTCCTTCC
T ss_pred ----CCCCcCCCCCCHHHHHHH----cCCHHHHHHHHhcCCCCCCc
Confidence 999999999999999998 78899999999999987653
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=9.4e-30 Score=234.49 Aligned_cols=179 Identities=17% Similarity=0.176 Sum_probs=163.2
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
.++++.+.+... .++.+|.+|.||||+|+..|+.++++.|+++|+++ +.+|.+|.||||+|+..|+.+++++| +.
T Consensus 16 ~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (261)
T 2xai_A 16 QLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGSWDCVNLLLQH 91 (261)
T ss_dssp HHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 367787876643 37888999999999999999999999999999999 89999999999999999999999999 88
Q ss_pred cCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccc
Q 015882 82 SESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQI 161 (399)
Q Consensus 82 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~ 161 (399)
+++++. +.+|+||||.|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|+ ++
T Consensus 92 g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~ 160 (261)
T 2xai_A 92 GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQRACVKKLLESGA----DV 160 (261)
T ss_dssp TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC----CT
T ss_pred CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC----CC
Confidence 888775 55699999999999999999999999877 78999999999999999999999999999999 88
Q ss_pred cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 162 DSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 162 ~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
+. |..|+||||+|+. .++.+++++|+++|++.+..
T Consensus 161 ~~-~~~g~t~Lh~A~~----~~~~~~v~~Ll~~gad~~~~ 195 (261)
T 2xai_A 161 NQ-GKGQDSPLHAVAR----TASEELACLLMDFGADTQAK 195 (261)
T ss_dssp TC-CBTTBCHHHHHHH----HTCHHHHHHHHHTTCCTTCC
T ss_pred CC-CCCCCChHHHHHH----cCCHHHHHHHHHcCCCCCCc
Confidence 85 8999999999998 77899999999999987653
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=241.34 Aligned_cols=185 Identities=15% Similarity=0.143 Sum_probs=163.4
Q ss_pred HHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccC
Q 015882 5 LIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSE 83 (399)
Q Consensus 5 ~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~ 83 (399)
.++.+... .+...+.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++| +++.
T Consensus 39 ~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~ 115 (351)
T 3utm_A 39 KLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV--HAKDKGGLVPLHNACSYGHYEVTELLLKHGA 115 (351)
T ss_dssp HHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence 34444433 24456788999999999999999999999999999999 88999999999999999999999999 9999
Q ss_pred CccccccCCchHHHHHHHcCCHHHHHHHHHhhhccc--------------------------------------------
Q 015882 84 SLAKLTSDAETALILAVKSSQIDAFKILVEETKRHN-------------------------------------------- 119 (399)
Q Consensus 84 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-------------------------------------------- 119 (399)
+++..|..|+||||+|+..|+.+++++|++.|++++
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (351)
T 3utm_A 116 CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVK 195 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHH
Confidence 999999999999999999999999999999876532
Q ss_pred ----------------------------------------ccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcc
Q 015882 120 ----------------------------------------REHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDII 159 (399)
Q Consensus 120 ----------------------------------------~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v 159 (399)
....+|.+|.+|+||||+|++.|+.+++++|++.|+
T Consensus 196 ~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga---- 271 (351)
T 3utm_A 196 KTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA---- 271 (351)
T ss_dssp HHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----
T ss_pred HHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----
Confidence 112467788999999999999999999999999999
Q ss_pred cccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 160 QIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 160 ~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+++.+|..|+||||+|+. .++.+++++|+++|++.+.
T Consensus 272 ~~n~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 272 KMNALDSLGQTALHRAAL----AGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp CTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHcCCCCCC
Confidence 999999999999999998 7889999999999998764
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=7.4e-30 Score=234.00 Aligned_cols=175 Identities=18% Similarity=0.199 Sum_probs=162.0
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCC-CCCCccCCCCCCcHHHHHHHcCCHHHHHHh-h
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDP-QTGSVVEDNGLTTPLHRAAVNGDTGMIREI-A 80 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~-~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~ 80 (399)
.++++.|.+.. ..++.+|..|+||||+|+..|+.+++++|+++++ ++ +.+|.+|.||||+|+..|+.+++++| +
T Consensus 70 ~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 145 (253)
T 1yyh_A 70 SDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL--DARMHDGTTPLILAARLAVEGMLEDLIN 145 (253)
T ss_dssp HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT--TCCCTTCCCHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--cccCCCCCcHHHHHHHcChHHHHHHHHH
Confidence 36788887764 3367889999999999999999999999999988 66 88999999999999999999999999 9
Q ss_pred ccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccc
Q 015882 81 CSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQ 160 (399)
Q Consensus 81 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~ 160 (399)
.+.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|++.|+.+++++|++.|+ +
T Consensus 146 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~ 215 (253)
T 1yyh_A 146 SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFA----N 215 (253)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----C
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC----C
Confidence 9999999999999999999999999999999999887 78899999999999999999999999999999 9
Q ss_pred ccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHcc
Q 015882 161 IDSKNNQGQTALDICKANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 161 ~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~g 195 (399)
++.+|..|+||+|+|++ .++.+++++|....
T Consensus 216 ~~~~d~~g~tpl~~A~~----~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 216 RDITDHMDRLPRDIAQE----RMHHDIVRLLDLEH 246 (253)
T ss_dssp TTCCCTTCCCHHHHHHH----TTCHHHHHHHHC--
T ss_pred ccccccCCCCHHHHHHH----cCCHHHHHHHHHHh
Confidence 99999999999999999 88999999998654
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=4.3e-30 Score=238.10 Aligned_cols=175 Identities=19% Similarity=0.272 Sum_probs=158.2
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCC-CccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchH
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTG-SVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETA 95 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~-~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~ 95 (399)
.+.+|.+|+||||+|+..|+.+++++|++++++.. .+.+|..|.||||+|+..|+.+++++| +++++++.+|..|+||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 46789999999999999999999999999988821 178999999999999999999999999 9999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhccc-----------------------------------------ccccccccCCCCCcH
Q 015882 96 LILAVKSSQIDAFKILVEETKRHN-----------------------------------------REHLFNATDKEGNSL 134 (399)
Q Consensus 96 Lh~A~~~g~~~~v~~Ll~~~~~~~-----------------------------------------~~~lin~~d~~G~T~ 134 (399)
||+|+..|+.+++++|++.+++.. ....++.+|..|+||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 999999999999999998765421 123478899999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCcccccccccC-CCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 135 LHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQ-GQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 135 LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~-g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
||+|+..|+.+++++|++.|+ +++.++.. |+||||+|+. .++.+++++|+++|++.+.
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGA----DLNKPEPTCGRTPLHLAVE----AQAASVLELLLKAGADPTA 220 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTC----CTTCCCTTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 999999999999999999999 99999865 9999999998 7889999999999998764
No 23
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.2e-30 Score=239.45 Aligned_cols=181 Identities=21% Similarity=0.227 Sum_probs=159.8
Q ss_pred hHHHHHHHhcCCcccccc----ccCCCChHhhHHHhc---CCHHHHHHHhhcCCCCCC---------ccCCCCCCcHHHH
Q 015882 3 NELIELAKKDKVQEKDST----QNQNGCTSMHRAPVE---GDGEMIHCLGKLDPQTGS---------VVEDNGLTTPLHR 66 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~----~d~~G~TpLh~Aa~~---G~~~~v~~Ll~~~~~~~~---------~~~d~~g~tpLh~ 66 (399)
+++++.+.+.... ++. +|.+|+||||+|+.. |+.+++++|+++|++... ..+|..|.||||+
T Consensus 19 ~~ll~~l~~~g~~--i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~ 96 (256)
T 2etb_A 19 TGLLEYLRWNSKY--LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHI 96 (256)
T ss_dssp TTHHHHHHHHTCC--TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHH
T ss_pred HHHHHHHHHcCCC--cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHH
Confidence 3466766655432 444 799999999999999 999999999999877620 1234789999999
Q ss_pred HHHcCCHHHHHHh-hccCCccccccC-------------CchHHHHHHHcCCHHHHHHHHH---hhhcccccccccccCC
Q 015882 67 AAVNGDTGMIREI-ACSESLAKLTSD-------------AETALILAVKSSQIDAFKILVE---ETKRHNREHLFNATDK 129 (399)
Q Consensus 67 Aa~~g~~~iv~~L-~~~~~~~~~d~~-------------g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~lin~~d~ 129 (399)
|+..|+.+++++| +.+++++.+|.. |+||||+|+..|+.+++++|++ .|++ +|.+|.
T Consensus 97 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------~n~~d~ 170 (256)
T 2etb_A 97 AIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------LEATDS 170 (256)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------cCccCC
Confidence 9999999999999 999999999886 9999999999999999999999 7777 889999
Q ss_pred CCCcHHHHHHH--cCcHH-------HHHHHHhCCCCCcccc-------cccccCCCCHHHHHHhcCCCCcHHHHHHHHHH
Q 015882 130 EGNSLLHLAAL--NKLIV-------IVNLLLEGSSSDIIQI-------DSKNNQGQTALDICKANSQDSVSNEIGSILER 193 (399)
Q Consensus 130 ~G~T~LHlA~~--~~~~~-------iv~~Ll~~g~~~~v~~-------~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~ 193 (399)
+|+||||+|+. .++.+ ++++|++.|+ ++ +.+|.+|+||||+|+. .++.+++++|++
T Consensus 171 ~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga----~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~ 242 (256)
T 2etb_A 171 LGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA----RLCPTVQLEEISNHQGLTPLKLAAK----EGKIEIFRHILQ 242 (256)
T ss_dssp TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH----HHSTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHH
T ss_pred CCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC----CcccccccccccCCCCCCHHHHHHH----hCCHHHHHHHHh
Confidence 99999999999 78888 9999999999 88 9999999999999999 889999999999
Q ss_pred ccCccC
Q 015882 194 AAARKQ 199 (399)
Q Consensus 194 ~ga~~~ 199 (399)
+|++..
T Consensus 243 ~g~~~~ 248 (256)
T 2etb_A 243 REFSGA 248 (256)
T ss_dssp HHHHHH
T ss_pred CCCCCC
Confidence 997654
No 24
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=5.6e-30 Score=220.55 Aligned_cols=161 Identities=20% Similarity=0.228 Sum_probs=151.3
Q ss_pred CChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcC
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSS 103 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g 103 (399)
+.||||.|+..|+.++++.|++.+++.. +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLV-NKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGG-GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccc-cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999998843 88999999999999999999999999 999999999999999999999999
Q ss_pred CHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCc
Q 015882 104 QIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSV 183 (399)
Q Consensus 104 ~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~ 183 (399)
+.+++++|++.|.+ ++.+|.+|+||||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|+. .+
T Consensus 81 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~----~~ 146 (172)
T 3v30_A 81 YTDIVGLLLERDVD------INIYDWNGGTPLLYAVRGNHVKCVEALLARGA----DLTTEADSGYTPMDLAVA----LG 146 (172)
T ss_dssp CHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----HT
T ss_pred CHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHH----hC
Confidence 99999999998877 88999999999999999999999999999999 999999999999999998 78
Q ss_pred HHHHHHHHHHccCccCC
Q 015882 184 SNEIGSILERAAARKQT 200 (399)
Q Consensus 184 ~~~i~~~L~~~ga~~~~ 200 (399)
+.+++++|+++|++...
T Consensus 147 ~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 147 YRKVQQVIENHILKLFQ 163 (172)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHHHhc
Confidence 89999999999987664
No 25
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.4e-29 Score=219.72 Aligned_cols=165 Identities=18% Similarity=0.204 Sum_probs=152.0
Q ss_pred CCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHH
Q 015882 23 QNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVK 101 (399)
Q Consensus 23 ~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~ 101 (399)
.++.+|||.|+..|+.++++.|++.++... +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDL-NQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 468899999999999999999999855433 88999999999999999999999999 9999999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCC
Q 015882 102 SSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQD 181 (399)
Q Consensus 102 ~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~ 181 (399)
.|+.+++++|++.|++ +|.+|.+|+||||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|+.
T Consensus 82 ~~~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~---- 147 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD------INAVNEHGNVPLHYACFWGQDQVAEDLVANGA----LVSICNKYGEMPVDKAKA---- 147 (179)
T ss_dssp TTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CSSBCCTTSCCGGGGSCH----
T ss_pred cCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CcchhccCCCCcHHHHHH----
Confidence 9999999999999887 88999999999999999999999999999999 999999999999999998
Q ss_pred CcHHHHHHHHHHccCccCCCC
Q 015882 182 SVSNEIGSILERAAARKQTAP 202 (399)
Q Consensus 182 ~~~~~i~~~L~~~ga~~~~~~ 202 (399)
.++.+++++|+++|++.+..+
T Consensus 148 ~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 148 PLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp HHHHHHHHHHHHTTCCCSCBC
T ss_pred HHHHHHHHHHHHhhcCcccCC
Confidence 788999999999999887643
No 26
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=5.4e-30 Score=219.13 Aligned_cols=160 Identities=23% Similarity=0.229 Sum_probs=146.0
Q ss_pred ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHH
Q 015882 21 QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILA 99 (399)
Q Consensus 21 ~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A 99 (399)
.|.+|.||||.|+..|+.++++.|++.++... +..+..|.||||+|+..|+.+++++| +.+.+++.+|.+|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNC-RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCc-cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 57789999999999999999999999655433 77888999999999999999999999 99999999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcC
Q 015882 100 VKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANS 179 (399)
Q Consensus 100 ~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~ 179 (399)
+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|..
T Consensus 83 ~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~a~~-- 150 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAV------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGA----DPTKKNRDGNTPLDLVKD-- 150 (165)
T ss_dssp HHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCTGGGSCT--
T ss_pred HHcCcHHHHHHHHhCCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCChhHhHhc--
Confidence 999999999999999887 78899999999999999999999999999999 999999999999999763
Q ss_pred CCCcHHHHHHHHHHccC
Q 015882 180 QDSVSNEIGSILERAAA 196 (399)
Q Consensus 180 ~~~~~~~i~~~L~~~ga 196 (399)
++.+++++|++.|+
T Consensus 151 ---~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 ---GDTDIQDLLRGDAA 164 (165)
T ss_dssp ---TCHHHHHHHHTC--
T ss_pred ---CChHHHHHHhhccc
Confidence 56699999999886
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3.1e-30 Score=233.74 Aligned_cols=173 Identities=18% Similarity=0.264 Sum_probs=155.4
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCC----CCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCc
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDP----QTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAE 93 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~----~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~ 93 (399)
+.+|.+|+||||+|+..|+.++++.|++.+. ++ +.+|..|.||||+|+..|+.+++++| +.+++++.+|..|+
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 79 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL--NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN 79 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCC--CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHh--hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 3578899999999999999999999999876 45 78999999999999999999999999 99999999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccccccc-CCCCHH
Q 015882 94 TALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNN-QGQTAL 172 (399)
Q Consensus 94 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~-~g~Tpl 172 (399)
||||+|+..|+.+++++|++.++++.....++..|..|+||||+|+..|+.+++++|++.|+ +++.+|. .|.|||
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA----DVNAQEPCNGRTAL 155 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC----CTTCCCTTTCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCCHH
Confidence 99999999999999999999988765566688999999999999999999999999999999 9999998 999999
Q ss_pred HHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 173 DICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 173 ~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
|+|+. .++.+++++|+++|++.+..
T Consensus 156 ~~A~~----~~~~~~v~~Ll~~ga~~~~~ 180 (236)
T 1ikn_D 156 HLAVD----LQNPDLVSLLLKCGADVNRV 180 (236)
T ss_dssp HHHHH----TTCHHHHHHHHTTTCCSCCC
T ss_pred HHHHH----cCCHHHHHHHHHcCCCCCcc
Confidence 99998 78899999999999987653
No 28
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=239.39 Aligned_cols=165 Identities=23% Similarity=0.259 Sum_probs=154.9
Q ss_pred cccccccCCCChHhhHHHhcCCHHHHHHHhhcCC-CCCCccCCCCCCcHHHHHH-----HcCCHHHHHHh-hccCCcccc
Q 015882 16 EKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDP-QTGSVVEDNGLTTPLHRAA-----VNGDTGMIREI-ACSESLAKL 88 (399)
Q Consensus 16 ~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~-~~~~~~~d~~g~tpLh~Aa-----~~g~~~iv~~L-~~~~~~~~~ 88 (399)
..++.+|.+|+||||+|+..|+.+++++|++.|+ ++ +..|..|.||||+|+ ..++.++++.| ..+...+..
T Consensus 102 ~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~ 179 (276)
T 4hbd_A 102 YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV--DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKA 179 (276)
T ss_dssp HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT--TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCC
T ss_pred hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC--CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcccc
Confidence 3467889999999999999999999999999998 76 899999999999999 67889999999 888888889
Q ss_pred ccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCcccccccccC
Q 015882 89 TSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLE-GSSSDIIQIDSKNNQ 167 (399)
Q Consensus 89 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~-~g~~~~v~~~~~n~~ 167 (399)
|..|+||||+|+.+|+.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++++|++ .|+ +++.+|.+
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga----d~~~~d~~ 249 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEAD------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSC----DISLTDRD 249 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC----CTTCCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCcCcCCC
Confidence 99999999999999999999999999887 88999999999999999999999999999 788 99999999
Q ss_pred CCCHHHHHHhcCCCCcHHHHHHHHHHccC
Q 015882 168 GQTALDICKANSQDSVSNEIGSILERAAA 196 (399)
Q Consensus 168 g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga 196 (399)
|+||||+|+. .++.+++++|++++.
T Consensus 250 g~TpL~~A~~----~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 250 GSTALMVALD----AGQSEIASMLYSRMN 274 (276)
T ss_dssp SCCHHHHHHH----HTCHHHHHHHHHHCC
T ss_pred CCCHHHHHHH----cCCHHHHHHHHhccC
Confidence 9999999998 788999999998763
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=5e-29 Score=232.82 Aligned_cols=177 Identities=18% Similarity=0.170 Sum_probs=118.4
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.|.+... .++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++| +.+
T Consensus 73 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (285)
T 3d9h_A 73 LSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGSWDCVNLLLQHG 148 (285)
T ss_dssp HHHHHHHHTTC--CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHCCC--CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCHHHHHHHHHHCC
Confidence 44555544332 24555566666666666666666666666666665 55666666666666666666666666 555
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
.+++.. .+|.||||+|+..|+.+++++|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.|+ +++
T Consensus 149 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~ 217 (285)
T 3d9h_A 149 ASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQRACVKKLLESGA----DVN 217 (285)
T ss_dssp CCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC----CTT
T ss_pred CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC----CCC
Confidence 555432 3366666666666666666666665554 67788888888888888888888888888887 676
Q ss_pred ccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 163 SKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 163 ~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
. |..|+||||+|+. .++.+++++|+++|++.+.
T Consensus 218 ~-~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 218 Q-GKGQDSPLHAVVR----TASEELACLLMDFGADTQA 250 (285)
T ss_dssp C-CBTTBCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred C-CCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 3 7788888888887 6777888888888877654
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=235.28 Aligned_cols=182 Identities=21% Similarity=0.246 Sum_probs=140.0
Q ss_pred HHHHHHHhcCCc------cccccccCCCChHhhHHHhcCCH-HHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHH
Q 015882 4 ELIELAKKDKVQ------EKDSTQNQNGCTSMHRAPVEGDG-EMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMI 76 (399)
Q Consensus 4 e~i~~l~~~~~~------~l~~~~d~~G~TpLh~Aa~~G~~-~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv 76 (399)
++++.|.+.... ...+..|..|.||||.|+..++. ++++.|++.|.++ +.+|.+|+||||+|+..|+.+++
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv--n~~d~~G~TpLh~A~~~g~~~~v 102 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV--NVTSQDGSSPLHVAALHGRADLI 102 (269)
T ss_dssp HHHHHHHTCC----------------------------------------CCCCT--TCCCTTSCCHHHHHHHTTCTTHH
T ss_pred HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCcHHHH
Confidence 567777654332 23566788999999999998876 4889999999999 89999999999999999999999
Q ss_pred HHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 77 REI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 77 ~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
++| ..+++++..+.+|.||+|.|+..++.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++++|++.|+
T Consensus 103 ~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~------~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 176 (269)
T 4b93_B 103 PLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK------PNKKDLSGNTPLIYACSGGHHELVALLLQHGA 176 (269)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC
T ss_pred HHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 999 99999999999999999999999999999999999887 78999999999999999999999999999999
Q ss_pred CCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 156 SDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 156 ~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
++|.+|..|.||||+|+. .++.+++++|+++|++.+..
T Consensus 177 ----dvn~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 177 ----SINASNNKGNTALHEAVI----EKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp ----CTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHTTCCSCCC
T ss_pred ----CCCccccCCCcHHHHHHH----cCCHHHHHHHHHCCCCCCCc
Confidence 999999999999999999 88899999999999987753
No 31
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=3e-29 Score=216.09 Aligned_cols=146 Identities=22% Similarity=0.320 Sum_probs=132.9
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.|.+... .++.+|.+|+||||+|+..|+.++++.|++.|+++ +.+|.+|+||||+|+..|+.+++++| +.+
T Consensus 18 ~~v~~Ll~~Ga--dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~--~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 93 (169)
T 4gpm_A 18 DRVKDLIENGA--DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV--NAKDSDGRTPLHHAAENGHKEVVKLLISKG 93 (169)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch--hhhccCCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 67788876653 37889999999999999999999999999999999 89999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
++++.+|.+|+||||+|+++|+.+++++|++.|++ ++.+|.+|+||||+|++.|+.+++++|+++|+ +++
T Consensus 94 advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA----~ie 163 (169)
T 4gpm_A 94 ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD------VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG----WLE 163 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---------
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CcC
Confidence 99999999999999999999999999999999887 78999999999999999999999999999999 665
Q ss_pred c
Q 015882 163 S 163 (399)
Q Consensus 163 ~ 163 (399)
.
T Consensus 164 ~ 164 (169)
T 4gpm_A 164 H 164 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 32
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=8.5e-30 Score=236.05 Aligned_cols=168 Identities=18% Similarity=0.196 Sum_probs=148.4
Q ss_pred cccCCCChHhhHHHhc---CCHHHHHHHhhcCCCCC---------CccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCcc
Q 015882 20 TQNQNGCTSMHRAPVE---GDGEMIHCLGKLDPQTG---------SVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLA 86 (399)
Q Consensus 20 ~~d~~G~TpLh~Aa~~---G~~~~v~~Ll~~~~~~~---------~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~ 86 (399)
..|..|+||||+|+.. |+.+++++|+++|++.. ...+|..|.||||+|+..|+.+++++| +.+++++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 4588999999999987 99999999999875431 023677999999999999999999999 8899999
Q ss_pred cccc--------------CCchHHHHHHHcCCHHHHHHHHH---hhhcccccccccccCCCCCcHHHHHHHcCc------
Q 015882 87 KLTS--------------DAETALILAVKSSQIDAFKILVE---ETKRHNREHLFNATDKEGNSLLHLAALNKL------ 143 (399)
Q Consensus 87 ~~d~--------------~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~lin~~d~~G~T~LHlA~~~~~------ 143 (399)
.++. .|+||||+|+..|+.+++++|++ .|++ +|.+|.+|+||||+|+..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------~~~~d~~g~tpLh~A~~~~~~~~~~~ 202 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------ISARDSVGNTVLHALVEVADNTVDNT 202 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------ceeeCCCCCcHHHHHHHccCcchhHH
Confidence 9987 79999999999999999999999 7776 88999999999999999888
Q ss_pred ---HHHHHHHHhCCCCCccccc-------ccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccC-ccCCC
Q 015882 144 ---IVIVNLLLEGSSSDIIQID-------SKNNQGQTALDICKANSQDSVSNEIGSILERAAA-RKQTA 201 (399)
Q Consensus 144 ---~~iv~~Ll~~g~~~~v~~~-------~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga-~~~~~ 201 (399)
.+++++|++.|+ +++ .+|.+|+||||+|+. .++.+++++|+++|+ ++...
T Consensus 203 ~~~~~~v~~Ll~~ga----~~n~~~~~~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 203 KFVTSMYNEILILGA----KLHPTLKLEEITNRKGLTPLALAAS----SGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp HHHHHHHHHHHHHHH----HHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHhhh----hcccccccccccCCCCCCHHHHHHH----hChHHHHHHHHHCCCCCchhh
Confidence 799999999998 776 599999999999999 889999999999999 44443
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=7.6e-29 Score=224.50 Aligned_cols=171 Identities=23% Similarity=0.273 Sum_probs=154.7
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhh----cCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCC
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGK----LDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDA 92 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~----~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g 92 (399)
++.+|.+|+||||+|+..|+.++++.|++ .+.++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 79 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL--DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHG 79 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC--CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 56789999999999999999999999997 67787 88999999999999999999999999 9999999999999
Q ss_pred chHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccc-cCCCCH
Q 015882 93 ETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKN-NQGQTA 171 (399)
Q Consensus 93 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n-~~g~Tp 171 (399)
+||||+|+..|+.+++++|++.++. ....++.+|..|+||||+|+..++.+++++|++.|+ +++..+ ..|.||
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~~g~t~ 153 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAP--GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA----DIDAVDIKSGRSP 153 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCT--TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC----CcccccccCCCcH
Confidence 9999999999999999999999763 223478899999999999999999999999999999 899998 889999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 172 LDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 172 l~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
||+|+. .++.+++++|+++|++.+.
T Consensus 154 L~~A~~----~~~~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 154 LIHAVE----NNSLSMVQLLLQHGANVNA 178 (241)
T ss_dssp HHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 999998 7889999999999988663
No 34
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.3e-29 Score=211.70 Aligned_cols=150 Identities=21% Similarity=0.219 Sum_probs=142.7
Q ss_pred CChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcC
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSS 103 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g 103 (399)
+.||||.|+..|+.++++.|++.+++. + .|..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~--~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF--T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC--C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC--C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 578999999999999999999999987 4 688999999999999999999999 999999999999999999999999
Q ss_pred CHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCc
Q 015882 104 QIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSV 183 (399)
Q Consensus 104 ~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~ 183 (399)
+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|+. .+
T Consensus 79 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~----~~ 144 (153)
T 1awc_B 79 HANIVEVLLKHGAD------VNAKDMLKMTALHWATEHNHQEVVELLIKYGA----DVHTQSKFCKTAFDISID----NG 144 (153)
T ss_dssp CHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TT
T ss_pred hHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccccCCCCCCHHHHHHH----cC
Confidence 99999999999877 78999999999999999999999999999999 999999999999999998 78
Q ss_pred HHHHHHHH
Q 015882 184 SNEIGSIL 191 (399)
Q Consensus 184 ~~~i~~~L 191 (399)
+.+++++|
T Consensus 145 ~~~i~~~L 152 (153)
T 1awc_B 145 NEDLAEIL 152 (153)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 88998887
No 35
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=4.4e-29 Score=225.24 Aligned_cols=166 Identities=19% Similarity=0.141 Sum_probs=145.8
Q ss_pred CCChHhhHHHhcCCHHHHHHHhhc-CCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCc-----cccccCCchHH
Q 015882 24 NGCTSMHRAPVEGDGEMIHCLGKL-DPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESL-----AKLTSDAETAL 96 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~-----~~~d~~g~t~L 96 (399)
.|+||||+|+..|+.++++.|++. +.++ +.+|.+|.||||+|+..|+.+++++| +.+.++ +..|.+|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV--HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc--ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 589999999999999999999998 8888 88999999999999999999999999 766665 66778999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhccccc-------ccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCC
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNRE-------HLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQ 169 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~-------~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~ 169 (399)
|+|+..|+.+++++|++.|++.+.. ...+..|.+|+||||+|+..|+.+++++|++.|+ +++.+|.+|+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~ 155 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA----DIRAQDSLGN 155 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCC
Confidence 9999999999999999998873311 0122234589999999999999999999999999 9999999999
Q ss_pred CHHHHHHhcCCCCcHHHHH----HHHHHccCccC
Q 015882 170 TALDICKANSQDSVSNEIG----SILERAAARKQ 199 (399)
Q Consensus 170 Tpl~~a~~~~~~~~~~~i~----~~L~~~ga~~~ 199 (399)
||||+|+. .++.+++ ++|+++|++..
T Consensus 156 t~L~~A~~----~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 156 TVLHILIL----QPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CHHHHHHT----CSCHHHHHHHHHHHHHTTCSCS
T ss_pred CHHHHHHH----cCChHHHHHHHHHHHhcCCchh
Confidence 99999998 5555555 99999998764
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=228.76 Aligned_cols=159 Identities=20% Similarity=0.211 Sum_probs=149.4
Q ss_pred CCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHc
Q 015882 24 NGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKS 102 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~ 102 (399)
+|+||||+|+..|+.++++.|+++|.++ +.+|.+|.||||+|+..|+.+++++| +.+++++.+|.+|+||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 6899999999999999999999999998 89999999999999999999999999 99999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCC
Q 015882 103 SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDS 182 (399)
Q Consensus 103 g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~ 182 (399)
|+.+++++|++.|++ ++ .+.+|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+. .
T Consensus 80 ~~~~~v~~Ll~~g~~------~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~----~ 144 (261)
T 2xai_A 80 GSWDCVNLLLQHGAS------VQ-PESDLASPIHEAARRGHVECVNSLIAYGG----NIDHKISHLGTPLYLACE----N 144 (261)
T ss_dssp TCHHHHHHHHHTTCC------SS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCBTTTBCHHHHHHH----T
T ss_pred CCHHHHHHHHHCCCC------CC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCCcCCCCCCCHHHHHHH----h
Confidence 999999999999887 33 35569999999999999999999999999 999999999999999998 7
Q ss_pred cHHHHHHHHHHccCccC
Q 015882 183 VSNEIGSILERAAARKQ 199 (399)
Q Consensus 183 ~~~~i~~~L~~~ga~~~ 199 (399)
++.+++++|+++|++.+
T Consensus 145 ~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 145 QQRACVKKLLESGADVN 161 (261)
T ss_dssp TCHHHHHHHHHHTCCTT
T ss_pred CCHHHHHHHHHcCCCCC
Confidence 88999999999998876
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=7.5e-29 Score=231.62 Aligned_cols=166 Identities=19% Similarity=0.186 Sum_probs=155.9
Q ss_pred ccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchH
Q 015882 17 KDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETA 95 (399)
Q Consensus 17 l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~ 95 (399)
....+|.+|+||||+|+..|+.++++.|++.|+++ +.+|.+|.||||+|+..|+.+++++| +.+++++.+|.+|+||
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~ 128 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 128 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS--CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 35678999999999999999999999999999998 89999999999999999999999999 9999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHH
Q 015882 96 LILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDIC 175 (399)
Q Consensus 96 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a 175 (399)
||+|+..|+.+++++|++.+++ ++. +.+|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~------~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGAS------VQP-ESDLASPIHEAARRGHVECVNSLIAYGG----NIDHKISHLGTPLYLA 197 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC------SSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTC----CTTCCBTTTBCHHHHH
T ss_pred HHHHHHcCHHHHHHHHHHCCCC------CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHH
Confidence 9999999999999999999877 333 4459999999999999999999999999 9999999999999999
Q ss_pred HhcCCCCcHHHHHHHHHHccCccC
Q 015882 176 KANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 176 ~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
+. .++.+++++|++.|++.+
T Consensus 198 ~~----~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 198 CE----NQQRACVKKLLESGADVN 217 (285)
T ss_dssp HH----TTCHHHHHHHHHTTCCTT
T ss_pred HH----cCcHHHHHHHHHCCCCCC
Confidence 98 788999999999998776
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=8.1e-29 Score=224.08 Aligned_cols=168 Identities=22% Similarity=0.251 Sum_probs=158.0
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHH
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETAL 96 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~L 96 (399)
.+.+|.+|.||||+|+..|+.+++++|+++|.++ +..+.+|.||||+|+..|+.+++++| +.+.+++.++..|.|||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI--DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc--CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 4678899999999999999999999999999999 88999999999999999999999999 99999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHH
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICK 176 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~ 176 (399)
|.|+..|+.+++++|++.+. ..++.+|..|.||||+|+..++.+++++|++.|+ +++.+|..|.||+|+|+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~L~~A~ 152 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQ-----MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS----DINIRDNEENICLHWAA 152 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTC-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCC-----CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCccCCCCCCHHHHHH
Confidence 99999999999999999862 2278899999999999999999999999999999 89999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHccCccCC
Q 015882 177 ANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 177 ~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
. .++.+++++|+++|++.+.
T Consensus 153 ~----~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 153 F----SGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp H----HCCHHHHHHHHTTTCCTTC
T ss_pred H----CCCHHHHHHHHHcCCCCCC
Confidence 8 7789999999999987764
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=6.1e-30 Score=235.07 Aligned_cols=186 Identities=19% Similarity=0.145 Sum_probs=156.9
Q ss_pred hHHHHHHHhcCCcccc--ccccCCCChHhhHHH---hcCCHHHHHHHhhcCCCC---------CCccCCCCCCcHHHHHH
Q 015882 3 NELIELAKKDKVQEKD--STQNQNGCTSMHRAP---VEGDGEMIHCLGKLDPQT---------GSVVEDNGLTTPLHRAA 68 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~--~~~d~~G~TpLh~Aa---~~G~~~~v~~Ll~~~~~~---------~~~~~d~~g~tpLh~Aa 68 (399)
+++++.+.+....-.. ...|.+|+||||+|+ ..|+.+++++|++.+++. .....|..|.||||+|+
T Consensus 22 ~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 101 (260)
T 3jxi_A 22 EGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI 101 (260)
T ss_dssp TTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred HHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH
Confidence 3456655544322111 123578999999999 779999999999987442 11455669999999999
Q ss_pred HcCCHHHHHHh-hccCCccccc--------------cCCchHHHHHHHcCCHHHHHHHHH---hhhcccccccccccCCC
Q 015882 69 VNGDTGMIREI-ACSESLAKLT--------------SDAETALILAVKSSQIDAFKILVE---ETKRHNREHLFNATDKE 130 (399)
Q Consensus 69 ~~g~~~iv~~L-~~~~~~~~~d--------------~~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~lin~~d~~ 130 (399)
..|+.+++++| +.+++++.+| ..|+||||+|+..|+.+++++|++ .|++ +|.+|.+
T Consensus 102 ~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------~~~~d~~ 175 (260)
T 3jxi_A 102 ERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------LRRQDSR 175 (260)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTT
T ss_pred HcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------CcccCCC
Confidence 99999999999 9999999998 589999999999999999999999 7776 8899999
Q ss_pred CCcHHHHHHHcCc---------HHHHHHHHhCCCCCcccc-------cccccCCCCHHHHHHhcCCCCcHHHHHHHHHHc
Q 015882 131 GNSLLHLAALNKL---------IVIVNLLLEGSSSDIIQI-------DSKNNQGQTALDICKANSQDSVSNEIGSILERA 194 (399)
Q Consensus 131 G~T~LHlA~~~~~---------~~iv~~Ll~~g~~~~v~~-------~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ 194 (399)
|+||||+|+..++ .+++++|++.|+ ++ +.+|.+|+||||+|+. .++.+++++|+++
T Consensus 176 g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga----~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~ 247 (260)
T 3jxi_A 176 GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA----KLFPDTNLEALLNNDGLSPLMMAAK----TGKIGIFQHIIRR 247 (260)
T ss_dssp SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH----HHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHH
T ss_pred CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc----ccccccchhhcccCCCCCHHHHHHH----cCCHHHHHHHHHh
Confidence 9999999998887 799999999998 77 7899999999999999 8899999999999
Q ss_pred cCccCCCC
Q 015882 195 AARKQTAP 202 (399)
Q Consensus 195 ga~~~~~~ 202 (399)
|++....+
T Consensus 248 g~~~~~~~ 255 (260)
T 3jxi_A 248 EIADAAAH 255 (260)
T ss_dssp HHHHHC--
T ss_pred CCCccccc
Confidence 98876543
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=4.1e-29 Score=241.06 Aligned_cols=182 Identities=19% Similarity=0.189 Sum_probs=141.2
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCcc----------------------------
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVV---------------------------- 55 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~---------------------------- 55 (399)
++++.|.+... .++.+|..|.||||+|+..|+.+++++|++++++. +.
T Consensus 34 ~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 109 (364)
T 3ljn_A 34 DEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH--SLWHGQKPIHLAVMANKTDLVVALVEGAKE 109 (364)
T ss_dssp HHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC--CCBTTBCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC--CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc--cccCCCCHHHHHHHcCCHHHHHHHHHhccc
Confidence 56677765542 35777888888888888888888888888887765 22
Q ss_pred ------------------------CCCCCCcHHHHHHHcC--CHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHH
Q 015882 56 ------------------------EDNGLTTPLHRAAVNG--DTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAF 108 (399)
Q Consensus 56 ------------------------~d~~g~tpLh~Aa~~g--~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v 108 (399)
+|.+|.||||+|+..| +.+++++| +.+++++.+|..|+||||+|+.+|+.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v 189 (364)
T 3ljn_A 110 RGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREAL 189 (364)
T ss_dssp HTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 5556777777777777 77777777 77777777777788888888888888888
Q ss_pred HHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHH
Q 015882 109 KILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIG 188 (399)
Q Consensus 109 ~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~ 188 (399)
++|++.|++. ....+|.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++
T Consensus 190 ~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~----~g~~~~v 260 (364)
T 3ljn_A 190 DLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI----DVNMEDNEHTVPLYLSVR----AAMVLLT 260 (364)
T ss_dssp HHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHHHH----TCCHHHH
T ss_pred HHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHHH----hChHHHH
Confidence 8888776541 233367788888888888888888888888888888 888888888888888888 7788888
Q ss_pred HHHHHccCcc
Q 015882 189 SILERAAARK 198 (399)
Q Consensus 189 ~~L~~~ga~~ 198 (399)
++|+++|++.
T Consensus 261 ~~Ll~~~~~~ 270 (364)
T 3ljn_A 261 KELLQKTDVF 270 (364)
T ss_dssp HHHHHHSCHH
T ss_pred HHHHHcCCch
Confidence 8888888765
No 41
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=2.4e-28 Score=226.05 Aligned_cols=185 Identities=22% Similarity=0.264 Sum_probs=115.7
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
+++++|.+.... ++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 53 ~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 128 (285)
T 1wdy_A 53 DIVELLLRHGAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV--NECDFYGFTAFMEAAVYGKVKALKFLYKRG 128 (285)
T ss_dssp HHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCcccCCHHHHHHHhCCHHHHHHHHHhC
Confidence 455555544322 3445556666666666666666666666666665 55566666666666666666666665 555
Q ss_pred CCcccc----------ccCCchHHHHHHHcCCHHHHHHHHHh-hhccc-------------------------------c
Q 015882 83 ESLAKL----------TSDAETALILAVKSSQIDAFKILVEE-TKRHN-------------------------------R 120 (399)
Q Consensus 83 ~~~~~~----------d~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~-------------------------------~ 120 (399)
.+++.. +..|.||||.|+..|+.+++++|++. +.+++ .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 554444 44455555555555555555555554 32210 0
Q ss_pred cccccccCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 121 EHLFNATDKEGNSLLHLAALNKLIVIVNLLLE-GSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 121 ~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~-~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
...++.+|.+|+||||+|++.|+.+++++|++ .|+ +++.+|.+|+||+|+|+. .++.+++++|+++|++.+
T Consensus 209 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~----~~~~~~~~g~t~l~~A~~----~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI----EINDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTD 280 (285)
T ss_dssp TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC----CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHSSCSC
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC----CccccCCCCCcHHHHHHH----cCcHHHHHHHHHcCCCCC
Confidence 11266777778888888888888888888887 566 777788888888888877 667778888888887766
Q ss_pred C
Q 015882 200 T 200 (399)
Q Consensus 200 ~ 200 (399)
.
T Consensus 281 ~ 281 (285)
T 1wdy_A 281 C 281 (285)
T ss_dssp C
T ss_pred c
Confidence 4
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=9.7e-29 Score=231.43 Aligned_cols=169 Identities=17% Similarity=0.181 Sum_probs=111.4
Q ss_pred CCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHH
Q 015882 23 QNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVK 101 (399)
Q Consensus 23 ~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~ 101 (399)
.+|.||||.||..|+.++++.|+++|+++ +.+|.+|.||||+|+..|+.+++++| +.+++++.+|..|+||||+|+.
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADI--NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34445555555555555555555555544 44455555555555555555555555 4455555555555555555555
Q ss_pred cCCHHHHHHHHHhhhcccc------------------------------------------------------ccccccc
Q 015882 102 SSQIDAFKILVEETKRHNR------------------------------------------------------EHLFNAT 127 (399)
Q Consensus 102 ~g~~~~v~~Ll~~~~~~~~------------------------------------------------------~~lin~~ 127 (399)
.|+.+++++|++.|++++. .......
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 5555555555554443210 0011235
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 128 DKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 128 d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
|..|.||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++++|+++|++.+..
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARY----DVNIKDYDGWTPLHAAAH----WGKEEACRILVENLCDMEAV 261 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTC----CTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCC----CCCCcCCCCCcHHHHHHh----cCCHHHHHHHHHcCCCCCCc
Confidence 6789999999999999999999999999 999999999999999999 78899999999999987654
No 43
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=5.4e-29 Score=232.63 Aligned_cols=174 Identities=17% Similarity=0.164 Sum_probs=149.3
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
+++.+++.+.. ++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+ +|.||||+|+..|+.+++++| +.
T Consensus 13 ~~v~~lL~~~~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 13 KQLKSFLSSKD----TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK--NLL--ENEFPLHQAATLEDTKIVKILLFS 84 (285)
T ss_dssp HHHHHHHHSTT----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG--SCC--TTCCHHHHHTTSSSCHHHHHHHHT
T ss_pred HHHHHHHHhCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC--CCC--CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 56777776542 6788999999999999999999999999999888 555 489999999999999999999 88
Q ss_pred cCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCC-CcHHHHHHHcCcHHHHHHHHhCCCCCccc
Q 015882 82 SESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEG-NSLLHLAALNKLIVIVNLLLEGSSSDIIQ 160 (399)
Q Consensus 82 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G-~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~ 160 (399)
+++++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..| .||||+|+..|+.+++++|++.++ +
T Consensus 85 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~----~ 154 (285)
T 3kea_A 85 GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP----S 154 (285)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG------GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC----T
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC------CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC----c
Confidence 999999999999999999999999999999999887 77888888 799999999999999999998887 3
Q ss_pred cccccc-CCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 161 IDSKNN-QGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 161 ~~~~n~-~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
. .+. .|.||||+|+. .++.+++++|+++|++.+.
T Consensus 155 ~--~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~gad~n~ 189 (285)
T 3kea_A 155 T--FDLAILLSCIHITIK----NGHVDMMILLLDYMTSTNT 189 (285)
T ss_dssp T--CCCSTHHHHHHHHHH----TTCHHHHHHHHHHHHHTCT
T ss_pred c--ccccCCccHHHHHHH----cChHHHHHHHHHcCCCCCc
Confidence 3 222 78888888888 7778888888888887664
No 44
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=9.3e-29 Score=209.26 Aligned_cols=152 Identities=20% Similarity=0.234 Sum_probs=143.0
Q ss_pred CChHhhHHHhcCCHHHHHHHhhc-CCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHc
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKL-DPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKS 102 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~ 102 (399)
|.||||.|+..|+.++++.|++. +.++ +.+|..|.||||+ +..|+.+++++| +.+.+++.+|..|+||||.|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHP--DALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCT--TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCc--cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 67999999999999999999998 2255 8899999999999 999999999999 99999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCC
Q 015882 103 SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDS 182 (399)
Q Consensus 103 g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~ 182 (399)
|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++. + +++.+|.+|+||+|+|+. .
T Consensus 79 ~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~----~~~~~~~~g~t~l~~A~~----~ 143 (156)
T 1bd8_A 79 GFLDTLKVLVEHGAD------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S----DLHRRDARGLTPLELALQ----R 143 (156)
T ss_dssp TCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S----CTTCCCTTSCCHHHHHHH----S
T ss_pred CcHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c----CCCCcCCCCCCHHHHHHH----c
Confidence 999999999999877 789999999999999999999999999999 7 899999999999999998 8
Q ss_pred cHHHHHHHHHHc
Q 015882 183 VSNEIGSILERA 194 (399)
Q Consensus 183 ~~~~i~~~L~~~ 194 (399)
++.+++++|+++
T Consensus 144 ~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 144 GAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHHTT
T ss_pred CcHHHHHHHHhh
Confidence 889999999864
No 45
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.4e-28 Score=220.99 Aligned_cols=172 Identities=18% Similarity=0.118 Sum_probs=154.1
Q ss_pred hHHHHHHHhcCCcccccc-ccCCCChHhhHHHhcCCHHHHHHHhhcC--CCCCCccCCCCCCcHHHHHHHcCCHHHHHHh
Q 015882 3 NELIELAKKDKVQEKDST-QNQNGCTSMHRAPVEGDGEMIHCLGKLD--PQTGSVVEDNGLTTPLHRAAVNGDTGMIREI 79 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~-~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~--~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L 79 (399)
.++++.+.+...+..... .|..|.||||+|+..|+.+++++|++++ +++ +.+|..|.||||+|+..|+.+++++|
T Consensus 49 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~L 126 (228)
T 2dzn_A 49 HEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL--NKITNQGVTCLHLAVGKKWFEVSQFL 126 (228)
T ss_dssp HHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT--TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc--ccCCcCCCCHHHHHHHcCCHhHHHHH
Confidence 467888877654333444 8899999999999999999999999998 676 88999999999999999999999999
Q ss_pred -hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhh-hcccccccccccCCCCCcHHHHHHHcCcHHHHHHHH-hCCCC
Q 015882 80 -ACSESLAKLTSDAETALILAVKSSQIDAFKILVEET-KRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLL-EGSSS 156 (399)
Q Consensus 80 -~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll-~~g~~ 156 (399)
+.+.+++.+|..|+||||+|+..|+.+++++|++.| .+ ++.+|.+|+||||+|+..++.+++++|+ +.|+
T Consensus 127 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga- 199 (228)
T 2dzn_A 127 IENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA------VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA- 199 (228)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC-
T ss_pred HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-
Confidence 999999999999999999999999999999999987 55 8899999999999999999999999999 8899
Q ss_pred CcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHH
Q 015882 157 DIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILER 193 (399)
Q Consensus 157 ~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~ 193 (399)
+++.+|.+|+||+|+|.. . ++.++|++
T Consensus 200 ---~~~~~~~~g~t~l~~A~~----~---~~~~~l~~ 226 (228)
T 2dzn_A 200 ---EYDLVDNKGAKAEDVALN----E---QVKKFFLN 226 (228)
T ss_dssp ---CSCCBCTTSCBGGGGCSS----T---THHHHHHT
T ss_pred ---CCCccCCCCCcHHHHHHH----H---HHHHHHHh
Confidence 999999999999999975 2 45555554
No 46
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=5e-28 Score=239.07 Aligned_cols=179 Identities=21% Similarity=0.257 Sum_probs=146.3
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
+++++|.+... ..+..+.+|.||||+|+..|+.++++.|++.+.++ +.++..|.||||+|+..|+.+++++| ..+
T Consensus 193 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 268 (437)
T 1n11_A 193 DIVKLLLPRGG--SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA--NAESVQGVTPLHLAAQEGHAEMVALLLSKQ 268 (437)
T ss_dssp HHHHHHGGGTC--CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHhCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHhcC
Confidence 45555554432 24455667777777777777777777777777777 67777788888888888888888888 777
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
.+++..|..|+||||+|++.|+.+++++|++.|.+ ++.+|..|+||||+|+..|+.+++++|++.|+ ++|
T Consensus 269 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~n 338 (437)
T 1n11_A 269 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQA----DVN 338 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC------TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC----CTT
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc------CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC----CCC
Confidence 77777788888888888888888888888887766 78899999999999999999999999999999 999
Q ss_pred ccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 163 SKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 163 ~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
.+|..|+||||+|+. .++.+++++|+++|++.+.
T Consensus 339 ~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 339 AKTKLGYSPLHQAAQ----QGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred CCCCCCCCHHHHHHH----CChHHHHHHHHHCcCCCCC
Confidence 999999999999998 7889999999999998764
No 47
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4.8e-28 Score=218.58 Aligned_cols=184 Identities=20% Similarity=0.251 Sum_probs=133.9
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.... ++.+|.+|.||||+|+..|+.+++++|++++++.. ...+..|.||||+|+..|+.+++++| +.+
T Consensus 23 ~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 99 (240)
T 3eu9_A 23 ERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD-QLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99 (240)
T ss_dssp HHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch-hhcCCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence 567777665533 67778889999999999999999999999998884 45566699999999999999999999 888
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhccc----------------------------ccccccccCC-CCCc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHN----------------------------REHLFNATDK-EGNS 133 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~----------------------------~~~lin~~d~-~G~T 133 (399)
.+++.+|..|+||||.|+..|+.+++++|++.+.+++ ....++.++. .|+|
T Consensus 100 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t 179 (240)
T 3eu9_A 100 ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNT 179 (240)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCC
T ss_pred CCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCc
Confidence 8899899999999999999999999999999876631 1122344443 5556
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCcc
Q 015882 134 LLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARK 198 (399)
Q Consensus 134 ~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~ 198 (399)
|||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|++ .++.+++++|++++++.
T Consensus 180 ~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~----~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 180 ALHWAVLAGNTTVISLLLEAGA----NVDAQNIKGESALDLAKQ----RKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTC----CTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHHC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHhhhcc
Confidence 6666666666666666666655 556666666666666665 55556666666655543
No 48
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=4.1e-28 Score=231.55 Aligned_cols=188 Identities=22% Similarity=0.248 Sum_probs=156.6
Q ss_pred HHHHHHHhcCCcccccccc-CCCChHhhHHHhcCCHHHHHHHhhcCCCCC------------------------------
Q 015882 4 ELIELAKKDKVQEKDSTQN-QNGCTSMHRAPVEGDGEMIHCLGKLDPQTG------------------------------ 52 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d-~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~------------------------------ 52 (399)
|++++|.+.... ++.+| ..|+||||+|+..|+.++|++|+++|+++.
T Consensus 39 ~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 4g8k_A 39 DLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGA 116 (337)
T ss_dssp HHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCC--CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccc
Confidence 678888765532 55555 459999999999999999999999887652
Q ss_pred -CccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCcccc----------ccCCchHHHHHHHcCCHHHHHHHHHh-hhccc
Q 015882 53 -SVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKL----------TSDAETALILAVKSSQIDAFKILVEE-TKRHN 119 (399)
Q Consensus 53 -~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~----------d~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~ 119 (399)
.+.+|..|.||||+|+..|+.+++++| ..+++++.. +..|.||||+|+++|+.+++++|++. |++++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 145678899999999999999999999 777766543 45689999999999999999999964 54432
Q ss_pred -------------------------------ccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCC
Q 015882 120 -------------------------------REHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQG 168 (399)
Q Consensus 120 -------------------------------~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g 168 (399)
....+|.+|.+|+||||+|+..|+.++++.|++.+. .+++.+|.+|
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~---~~vn~~d~~G 273 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH---IEINDTDSDG 273 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT---CCTTCBCTTS
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC---CcccCcCCCC
Confidence 223578899999999999999999999999998633 3899999999
Q ss_pred CCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 169 QTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 169 ~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+||||+|++ .++.+++++|+++|++.+.
T Consensus 274 ~TpL~~A~~----~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 274 KTALLLAVE----LKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp CBHHHHHHH----TTCHHHHHHHHTTSCSSTT
T ss_pred CCHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 999999999 7889999999999998763
No 49
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.2e-27 Score=221.34 Aligned_cols=190 Identities=19% Similarity=0.232 Sum_probs=164.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+... ......+..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++| +.+
T Consensus 19 ~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 19 DLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP--VLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp HHHHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 57777776552 222334788999999999999999999999999999 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhccccc----ccccccCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNRE----HLFNATDKEGNSLLHLAALNKLIVIVNLLLEG-SSSD 157 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~----~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~-g~~~ 157 (399)
.+++..|..|+||||.|+..|+.+++++|++.|.+++.. ...+..|..|.||||+|+..|+.+++++|++. +.
T Consensus 96 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-- 173 (285)
T 1wdy_A 96 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA-- 173 (285)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC--
T ss_pred CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCC--
Confidence 999999999999999999999999999999998873211 01112288899999999999999999999987 77
Q ss_pred cccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 158 IIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 158 ~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+++.+|..|.||+|+|+..+......+++++|+++|++.+.
T Consensus 174 --~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~ 214 (285)
T 1wdy_A 174 --DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214 (285)
T ss_dssp --CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC
T ss_pred --CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC
Confidence 89999999999999999855545558999999999988764
No 50
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=3.5e-29 Score=233.88 Aligned_cols=176 Identities=15% Similarity=0.076 Sum_probs=159.5
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.|.+.... ++.. +|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 45 ~~v~~Ll~~g~~--~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 45 RLVCTLLNAGAL--KNLL--ENEFPLHQAATLEDTKIVKILLFSGLDD--SQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp HHHHHHHHTTGG--GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHhCCCC--CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 677888766432 3333 5999999999999999999999999999 88999999999999999999999999 889
Q ss_pred CCccccccCC-chHHHHHHHcCCHHHHHHHHHhhhcccccccccccCC-CCCcHHHHHHHcCcHHHHHHHHhCCCCCccc
Q 015882 83 ESLAKLTSDA-ETALILAVKSSQIDAFKILVEETKRHNREHLFNATDK-EGNSLLHLAALNKLIVIVNLLLEGSSSDIIQ 160 (399)
Q Consensus 83 ~~~~~~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~-~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~ 160 (399)
++++.+|..| +||||+|+..|+.+++++|++.+++. .|. .|+||||+|+..|+.+++++|++.|+ +
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d 186 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMT----S 186 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT--------CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH----H
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc--------ccccCCccHHHHHHHcChHHHHHHHHHcCC----C
Confidence 9999999999 89999999999999999999997652 333 89999999999999999999999999 9
Q ss_pred ccccccCCCCH-HHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 161 IDSKNNQGQTA-LDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 161 ~~~~n~~g~Tp-l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
++.+|..|+|| ||+|+. .++.+++++|+++|++.+..
T Consensus 187 ~n~~~~~g~t~~L~~A~~----~~~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 187 TNTNNSLLFIPDIKLAID----NKDIEMLQALFKYDINIYSA 224 (285)
T ss_dssp TCTTCCCBCCTTHHHHHH----HTCHHHHHHHTTSCBCSTTT
T ss_pred CCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCCCCCCC
Confidence 99999999998 999998 77899999999999988753
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=7e-28 Score=212.31 Aligned_cols=169 Identities=20% Similarity=0.191 Sum_probs=152.1
Q ss_pred cCCCChHhhHHHhcCCHHHHHHHhhcCC-CCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHH
Q 015882 22 NQNGCTSMHRAPVEGDGEMIHCLGKLDP-QTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILA 99 (399)
Q Consensus 22 d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~-~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A 99 (399)
+..|.||||.|+..|+.+.++.|++.++ ++ +.+|.+|.||||+|+..|+.+++++| +.+++++.+|..|+||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQV--DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3568999999999999999999999887 66 88999999999999999999999999 99999999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcC
Q 015882 100 VKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANS 179 (399)
Q Consensus 100 ~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~ 179 (399)
+..|+.+++++|++.+. ..++.+|..|+||||+|+..++.+++++|++.+. .+++.+|..|+||||+|+..+
T Consensus 80 ~~~~~~~~~~~Ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 80 GAQGRTEILAYMLKHAT-----PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHTTCHHHHHHHHHHSC-----CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC---CCTTCCCTTSCCHHHHHHHSS
T ss_pred HHcCCHHHHHHHHhccC-----cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCcCCCCCCCCCHHHHHHHhc
Confidence 99999999999996533 2378899999999999999999999999999993 289999999999999999744
Q ss_pred C-CCcHHHHHHHHHHccCccCC
Q 015882 180 Q-DSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 180 ~-~~~~~~i~~~L~~~ga~~~~ 200 (399)
. ..+..+++++|+++|++.+.
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTC
T ss_pred cchhhHHHHHHHHHHCCCCCCc
Confidence 3 23348999999999988764
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.4e-28 Score=237.38 Aligned_cols=168 Identities=16% Similarity=0.157 Sum_probs=106.0
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHH
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETAL 96 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~L 96 (399)
....|.+|.||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+++.+. .+|+|||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L 88 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP--TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPI 88 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHH
Confidence 4567889999999999999999999999999999 89999999999999999999999999 77664433 3455555
Q ss_pred HHHHHcCCHHHHHHHHHhhh----ccc-----------ccccccccCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCcc
Q 015882 97 ILAVKSSQIDAFKILVEETK----RHN-----------REHLFNATDKEGNSLLHLAALNK--LIVIVNLLLEGSSSDII 159 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~----~~~-----------~~~lin~~d~~G~T~LHlA~~~~--~~~iv~~Ll~~g~~~~v 159 (399)
|+|+..|+.+++++|++.+. +++ .....+.+|.+|.||||+|+..| +.+++++|++.|+
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga---- 164 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA---- 164 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC----
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC----
Confidence 55555555555555555522 100 00011224444555555555544 4455555554444
Q ss_pred cccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCc
Q 015882 160 QIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAAR 197 (399)
Q Consensus 160 ~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~ 197 (399)
+++.+|..|.||||+|+. .++.+++++|+++|++
T Consensus 165 ~~~~~d~~g~t~L~~A~~----~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAME----FRNREALDLMMDTVPS 198 (364)
T ss_dssp CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHCSC
T ss_pred CCcccCCCCCCHHHHHHH----cCCHHHHHHHHhcccc
Confidence 444444444555554444 3444444444444444
No 53
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=5.8e-28 Score=234.26 Aligned_cols=175 Identities=21% Similarity=0.278 Sum_probs=157.9
Q ss_pred cccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc---CCccccccC
Q 015882 16 EKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS---ESLAKLTSD 91 (399)
Q Consensus 16 ~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~---~~~~~~d~~ 91 (399)
..++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| ..+ .+++..|.+
T Consensus 157 a~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~ 234 (373)
T 2fo1_E 157 ADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP--TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRN 234 (373)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTT
T ss_pred CCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC--cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCC
Confidence 346788999999999999999999999999999999 89999999999999999999999999 666 789999999
Q ss_pred CchHHHHHHHcC---CHHHHHHHHHhhhccccc--ccccccCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCcccccccc
Q 015882 92 AETALILAVKSS---QIDAFKILVEETKRHNRE--HLFNATDKEGNSLLHLAALNKLIVIVNLLLEGS-SSDIIQIDSKN 165 (399)
Q Consensus 92 g~t~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~--~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g-~~~~v~~~~~n 165 (399)
|+||||+|+..+ +.+++++|++.|++.+.. ...+.+|..|+||||+|+..|+.+++++|++.+ + +++.+|
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~----~~n~~d 310 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS----NKDKQD 310 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC----CTTCCC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC----CccCcC
Confidence 999999999998 899999999998874321 113447889999999999999999999999886 6 899999
Q ss_pred cCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 166 NQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 166 ~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
.+|+||||+|+. .++.+++++|+++|++.+.
T Consensus 311 ~~g~TpL~~A~~----~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 311 EDGKTPIMLAAQ----EGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp TTCCCHHHHHHH----HTCHHHHHHHHHTTCCSSC
T ss_pred CCCCCHHHHHHH----cCCHHHHHHHHHcCCCccC
Confidence 999999999998 7889999999999998764
No 54
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.3e-28 Score=235.99 Aligned_cols=178 Identities=20% Similarity=0.227 Sum_probs=160.2
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcC---CCCCCccCCCCCCcHHHHHHHcC---CHHHH
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLD---PQTGSVVEDNGLTTPLHRAAVNG---DTGMI 76 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~---~~~~~~~~d~~g~tpLh~Aa~~g---~~~iv 76 (399)
.+++++|.+... .++..|.+|.||||+|+..|+.+++++|++++ .++ +..|..|.||||+|+..| +.+++
T Consensus 179 ~~iv~~Ll~~ga--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~d~~g~t~L~~A~~~~~~~~~~~v 254 (373)
T 2fo1_E 179 RRLVAYLMKAGA--DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI--EELDRNGMTALMIVAHNEGRDQVASA 254 (373)
T ss_dssp HHHHHHHHHTTC--CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT--SCCCTTSCCHHHHHHHSCSTTHHHHH
T ss_pred HHHHHHHHHCCC--CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh--hhcCCCCCCHHHHHHHhCCcchHHHH
Confidence 367888877653 36778899999999999999999999999987 677 789999999999999998 89999
Q ss_pred HHh-hccCCccc--------cccCCchHHHHHHHcCCHHHHHHHHHhh-hcccccccccccCCCCCcHHHHHHHcCcHHH
Q 015882 77 REI-ACSESLAK--------LTSDAETALILAVKSSQIDAFKILVEET-KRHNREHLFNATDKEGNSLLHLAALNKLIVI 146 (399)
Q Consensus 77 ~~L-~~~~~~~~--------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~lin~~d~~G~T~LHlA~~~~~~~i 146 (399)
++| +.+.+++. .|..|+||||+|+..|+.+++++|++.+ .+ +|.+|.+|+||||+|+..|+.++
T Consensus 255 ~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~------~n~~d~~g~TpL~~A~~~g~~~i 328 (373)
T 2fo1_E 255 KLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN------KDKQDEDGKTPIMLAAQEGRIEV 328 (373)
T ss_dssp HHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC------TTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC------ccCcCCCCCCHHHHHHHcCCHHH
Confidence 999 88887775 5678999999999999999999999885 54 88999999999999999999999
Q ss_pred HHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCcc
Q 015882 147 VNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARK 198 (399)
Q Consensus 147 v~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~ 198 (399)
+++|++.|+ +++.+|.+|+||+|+|+. .++.+++++|+++|+++
T Consensus 329 v~~Ll~~ga----d~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 329 VMYLIQQGA----SVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHTTC----CSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC---
T ss_pred HHHHHHcCC----CccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccc
Confidence 999999999 999999999999999999 88999999999998764
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.4e-28 Score=234.33 Aligned_cols=166 Identities=20% Similarity=0.185 Sum_probs=143.2
Q ss_pred HHHHHHHhcCCcccccc-ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCC---HHHHHHh
Q 015882 4 ELIELAKKDKVQEKDST-QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGD---TGMIREI 79 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~-~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~L 79 (399)
++++.+.+.. ..++. +|.+|+||||+|+..|+.++|++|+++|+++ +.+|.+|.||||+|+..|+ .++++.|
T Consensus 111 ~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~--n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 111 EVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR--LYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHCTTSC--CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred HHHHHHHhcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 4455554433 33666 8999999999999999999999999999999 8999999999999999998 6777777
Q ss_pred -hc-cCCccccccCCchHHHHHHH----cCCHHHHHHHHHhhhcc--------------------cc-------------
Q 015882 80 -AC-SESLAKLTSDAETALILAVK----SSQIDAFKILVEETKRH--------------------NR------------- 120 (399)
Q Consensus 80 -~~-~~~~~~~d~~g~t~Lh~A~~----~g~~~~v~~Ll~~~~~~--------------------~~------------- 120 (399)
+. .++++.+|.+|+||||+|++ .|+.+++++|++.+... +.
T Consensus 187 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~ 266 (327)
T 1sw6_A 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 266 (327)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHC
T ss_pred HHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHH
Confidence 44 36789999999999999999 89999999999885421 00
Q ss_pred ------cccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 121 ------EHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 121 ------~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
+..+|.+|.+|+||||+|++.|+.+++++|+++|+ +++.+|.+|+||||+|++
T Consensus 267 ~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 267 DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA----DPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp SHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC----CTTCCCTTSCCGGGGTCC
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCCHHHHHHh
Confidence 00388999999999999999999999999999999 999999999999999986
No 56
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=3.6e-27 Score=232.94 Aligned_cols=178 Identities=21% Similarity=0.254 Sum_probs=125.3
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.|.+... .++..|..|.||||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..|+.+++++| +.+
T Consensus 28 ~~v~~Ll~~g~--~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 103 (437)
T 1n11_A 28 PIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV--NAKAKDDQTPLHCAARIGHTNMVKLLLENN 103 (437)
T ss_dssp HHHHHHHHTTC--CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS--SCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence 45666655432 24556667777777777777777777777777776 66777777777777777777777777 667
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
++++..|..|+||||+|+.+|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|++.++ +++
T Consensus 104 a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~ 173 (437)
T 1n11_A 104 ANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS------QACMTKKGFTPLHVAAKYGKVRVAELLLERDA----HPN 173 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTT
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC------CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC----CCC
Confidence 77777777777777777777777777777776554 45666777777777777777777777777777 677
Q ss_pred ccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 163 SKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 163 ~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
..|..|.||||+|+. .++.+++++|++.|++..
T Consensus 174 ~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~ 206 (437)
T 1n11_A 174 AAGKNGLTPLHVAVH----HNNLDIVKLLLPRGGSPH 206 (437)
T ss_dssp CCCSSCCCHHHHHHH----TTCHHHHHHHGGGTCCSC
T ss_pred CCCCCCCCHHHHHHH----cCCHHHHHHHHhCCCCCC
Confidence 777777777777776 566777777777776544
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.2e-27 Score=205.80 Aligned_cols=155 Identities=12% Similarity=0.147 Sum_probs=138.2
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. +...+.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 16 ~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 92 (172)
T 3v30_A 16 DQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP--HILAKERESALSLASTGGYTDIVGLLLERD 92 (172)
T ss_dssp HHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--hhhcccCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5566666554 4557888999999999999999999999999999999 89999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|+++++ +..
T Consensus 93 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~----~~~ 162 (172)
T 3v30_A 93 VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD------LTTEADSGYTPMDLAVALGYRKVQQVIENHIL----KLF 162 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH----HHS
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH----HHh
Confidence 99999999999999999999999999999999887 78899999999999999999999999999999 888
Q ss_pred ccccCCCCH
Q 015882 163 SKNNQGQTA 171 (399)
Q Consensus 163 ~~n~~g~Tp 171 (399)
..|..|.||
T Consensus 163 ~~~~~~~~p 171 (172)
T 3v30_A 163 QSNLVPADP 171 (172)
T ss_dssp CC-------
T ss_pred cccCCCCCC
Confidence 899888887
No 58
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3e-28 Score=221.54 Aligned_cols=165 Identities=17% Similarity=0.127 Sum_probs=120.0
Q ss_pred cCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHH
Q 015882 22 NQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAV 100 (399)
Q Consensus 22 d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~ 100 (399)
+..|.||||.|+..|+.+.++.|+++|.++ + .+..|.||||.|+..|+.++++.| +.+++++.+|.+|+||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~--~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV--K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAV 78 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc--c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 457999999999999999999999999998 4 347889999999999999999999 999999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCC-CHHHHHHhcC
Q 015882 101 KSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQ-TALDICKANS 179 (399)
Q Consensus 101 ~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~-Tpl~~a~~~~ 179 (399)
.+|+.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++++|+++|+ +++.+|..|. ||+|+|..
T Consensus 79 ~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~~~~t~l~~a~~-- 146 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN------VNAADSDGWTPLHCAASCNNVQVCKFLVESGA----AVFAMTYSDMQTAADKCEE-- 146 (239)
T ss_dssp HHTCHHHHHHHHHHTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCSSSCCCHHHHCCS--
T ss_pred HcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CcceecCCCCcchHHHHHH--
Confidence 99999999999999887 88999999999999999999999999999999 9999998887 99999832
Q ss_pred CCCcHHHHHHHHHHccCccCCC
Q 015882 180 QDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 180 ~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
...++.+++++|+++|++.+..
T Consensus 147 ~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 147 MEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp SSTTCCCHHHHHHHHHHHTTTT
T ss_pred hhhccHHHHHHHHHhhhccccc
Confidence 1156788999999999987653
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.2e-27 Score=219.31 Aligned_cols=162 Identities=22% Similarity=0.195 Sum_probs=141.8
Q ss_pred CCChHhhHHHhcCCHH----HHHHHhhcCCCCCCcc----CCCCCCcHHHHHHHc---CCHHHHHHh-hccCCccc----
Q 015882 24 NGCTSMHRAPVEGDGE----MIHCLGKLDPQTGSVV----EDNGLTTPLHRAAVN---GDTGMIREI-ACSESLAK---- 87 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~----~v~~Ll~~~~~~~~~~----~d~~g~tpLh~Aa~~---g~~~iv~~L-~~~~~~~~---- 87 (399)
.|+||||.|+..|+.+ ++++|++.+.++ +. +|.+|.||||+|+.. |+.+++++| +.+++.+.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i--~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL--TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT--TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 3899999999999997 567777799998 66 899999999999999 999999999 66655542
Q ss_pred -------cccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCC-------------CCcHHHHHHHcCcHHHH
Q 015882 88 -------LTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKE-------------GNSLLHLAALNKLIVIV 147 (399)
Q Consensus 88 -------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~-------------G~T~LHlA~~~~~~~iv 147 (399)
.|.+|+||||+|+..|+.+++++|++.|++ ++.+|.. |+||||+|+..|+.+++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v 152 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV 152 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 346799999999999999999999999887 6677765 99999999999999999
Q ss_pred HHHHh---CCCCCcccccccccCCCCHHHHHHhcCCCCcHHH-------HHHHHHHccCccC
Q 015882 148 NLLLE---GSSSDIIQIDSKNNQGQTALDICKANSQDSVSNE-------IGSILERAAARKQ 199 (399)
Q Consensus 148 ~~Ll~---~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~-------i~~~L~~~ga~~~ 199 (399)
++|++ .|+ +++.+|.+|+||||+|+..+. ++.+ ++++|+++|++..
T Consensus 153 ~~Ll~~~~~ga----~~n~~d~~g~TpLh~A~~~~~--~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 153 TYLLENPHQPA----SLEATDSLGNTVLHALVMIAD--NSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp HHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCC--SCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhccccCC----CcCccCCCCCCHHHHHHHccc--CCchhhHHHHHHHHHHHHcCCCcc
Confidence 99999 888 999999999999999996322 2444 9999999999884
No 60
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=9.8e-28 Score=203.47 Aligned_cols=145 Identities=12% Similarity=0.075 Sum_probs=119.2
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCch-H
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAET-A 95 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t-~ 95 (399)
....++.|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+ .|+.+++++| +.+.+++.+|..|+| |
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP--NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRP 81 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT--TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 3566788999999999999999999999999999 889999999999985 9999999999 999999999999999 9
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHH
Q 015882 96 LILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDIC 175 (399)
Q Consensus 96 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a 175 (399)
||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|+++|+ +++.+|..|.||.+-+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGAR------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAG----GTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC----CCCccCcCcCcccccC
Confidence 9999999999999999999887 88999999999999999999999999999999 9999999999998744
No 61
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=1.2e-26 Score=221.44 Aligned_cols=173 Identities=23% Similarity=0.257 Sum_probs=142.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
+++++|.+... .++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 72 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 147 (351)
T 3utm_A 72 RIVQLLLQHGA--DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV--NAMDLWQFTPLHEAASKNRVEVCSLLLSHG 147 (351)
T ss_dssp HHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCC--CCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 56777766542 36777788888888888888888888888888888 77888888888888888887777776 433
Q ss_pred --------------------------------------------------------------------------------
Q 015882 83 -------------------------------------------------------------------------------- 82 (399)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (399)
T Consensus 148 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 227 (351)
T 3utm_A 148 ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227 (351)
T ss_dssp CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence
Q ss_pred ----------CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHh
Q 015882 83 ----------ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLE 152 (399)
Q Consensus 83 ----------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~ 152 (399)
.+++.+|.+|+||||+|+++|+.+++++|++.|++ +|.+|..|+||||+|+..|+.+++++|++
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 301 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK------MNALDSLGQTALHRAALAGHLQTCRLLLS 301 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 34455677899999999999999999999999877 88999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCcc
Q 015882 153 GSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARK 198 (399)
Q Consensus 153 ~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~ 198 (399)
.|+ +++.+|.+|+||+|+|. .++.++|.+.+...
T Consensus 302 ~ga----d~~~~~~~g~tal~~a~--------~~~~~~l~~~~~~~ 335 (351)
T 3utm_A 302 YGS----DPSIISLQGFTAAQMGN--------EAVQQILSESTPMR 335 (351)
T ss_dssp TTC----CTTCCCTTSCCHHHHSC--------HHHHHHHHHC----
T ss_pred cCC----CCCCcCCCCCChhhhhh--------HHHHHHHHhccccc
Confidence 999 99999999999999874 36778887776543
No 62
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=2.7e-27 Score=221.64 Aligned_cols=172 Identities=22% Similarity=0.247 Sum_probs=150.0
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.... ++..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +++
T Consensus 54 ~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g 129 (299)
T 1s70_B 54 EEVLRLLERGAD--INYANVDGLTALHQACIDDNVDMVKFLVENGANI--NQPDNEGWIPLHAAASCGYLDIAEYLISQG 129 (299)
T ss_dssp HHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Confidence 567777765533 6788999999999999999999999999999999 89999999999999999999999999 777
Q ss_pred CCccccc------------------------------------------------------------cCCchHHHHHHHc
Q 015882 83 ESLAKLT------------------------------------------------------------SDAETALILAVKS 102 (399)
Q Consensus 83 ~~~~~~d------------------------------------------------------------~~g~t~Lh~A~~~ 102 (399)
++++..| ..|.||||+|+..
T Consensus 130 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 130 AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 7766554 3477889999999
Q ss_pred CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCC
Q 015882 103 SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDS 182 (399)
Q Consensus 103 g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~ 182 (399)
|+.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++++|++.|+ +++.+|..|+||+|+|.+ .
T Consensus 210 g~~~~v~~Ll~~g~d------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~t~l~~A~~----~ 275 (299)
T 1s70_B 210 GYTEVLKLLIQARYD------VNIKDYDGWTPLHAAAHWGKEEACRILVENLC----DMEAVNKVGQTAFDVADE----D 275 (299)
T ss_dssp TCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCTTTSCCS----G
T ss_pred CcHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH----H
Confidence 999999999998877 88999999999999999999999999999999 999999999999999975 3
Q ss_pred cHHHHHHHHHHc
Q 015882 183 VSNEIGSILERA 194 (399)
Q Consensus 183 ~~~~i~~~L~~~ 194 (399)
..+.++.+++.
T Consensus 276 -~~~~l~~l~~~ 286 (299)
T 1s70_B 276 -ILGYLEELQKK 286 (299)
T ss_dssp -GGHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 34444444443
No 63
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.2e-27 Score=221.44 Aligned_cols=173 Identities=18% Similarity=0.232 Sum_probs=142.0
Q ss_pred cccccCCCChHhhHHHhcCCHHHHHHHhh----cCCCCCC--ccCCCCCCcHHHHHHHc---CCHHHHHHh-hccCC---
Q 015882 18 DSTQNQNGCTSMHRAPVEGDGEMIHCLGK----LDPQTGS--VVEDNGLTTPLHRAAVN---GDTGMIREI-ACSES--- 84 (399)
Q Consensus 18 ~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~----~~~~~~~--~~~d~~g~tpLh~Aa~~---g~~~iv~~L-~~~~~--- 84 (399)
.+..|..|+||||+|+..|+.++|+.|++ .+.++.. ...|..|.||||+|+.. |+.+++++| +.+++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 46678999999999999999999999887 4444410 14588999999999987 999999999 65543
Q ss_pred ----c----cccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCC--------------CCCcHHHHHHHcC
Q 015882 85 ----L----AKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDK--------------EGNSLLHLAALNK 142 (399)
Q Consensus 85 ----~----~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~--------------~G~T~LHlA~~~~ 142 (399)
+ ...|..|+||||+|+..|+.+++++|++.|++ ++.+|. .|+||||+|+..|
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD------VQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC------cCccccccccccccccccccCCCCHHHHHHHcC
Confidence 2 22567899999999999999999999999887 566665 7999999999999
Q ss_pred cHHHHHHHHh---CCCCCcccccccccCCCCHHHHHHhcCCCCcH-----HHHHHHHHHccCccCC
Q 015882 143 LIVIVNLLLE---GSSSDIIQIDSKNNQGQTALDICKANSQDSVS-----NEIGSILERAAARKQT 200 (399)
Q Consensus 143 ~~~iv~~Ll~---~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~-----~~i~~~L~~~ga~~~~ 200 (399)
+.+++++|++ .|+ +++.+|.+|+||||+|+..+..... .+++++|+++|++.+.
T Consensus 160 ~~~~v~~Ll~~~~~ga----d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPA----DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp CHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHhcccCCC----CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999 888 9999999999999999973332111 6899999999998763
No 64
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.1e-29 Score=224.45 Aligned_cols=155 Identities=15% Similarity=0.099 Sum_probs=133.2
Q ss_pred HHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCc
Q 015882 7 ELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESL 85 (399)
Q Consensus 7 ~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~ 85 (399)
+++.+...+...+..+.+|.||||+|+..|+.++++.|++.|+++ +.+|.+|.||||+|+..|+.+++++| +.++++
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP--SQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 344455556667788889999999999999999999999999999 88999999999999999999999999 999999
Q ss_pred cccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccC-CCCCcHHHHH--HHcCcHHHHHHHHhCCCCCccccc
Q 015882 86 AKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATD-KEGNSLLHLA--ALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 86 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d-~~G~T~LHlA--~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
+.+|..|+||||+|+..|+.+++++|++.|++ ++.+| .+|+||||+| +..++.+++++|++.|+ +++
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga----~~~ 150 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAA------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQ----SMG 150 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH----HTT
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC----Ccc
Confidence 99999999999999999999999999999887 77776 6999999999 99999999999999877 454
Q ss_pred ccccCCCCHHH
Q 015882 163 SKNNQGQTALD 173 (399)
Q Consensus 163 ~~n~~g~Tpl~ 173 (399)
.+|..|.||++
T Consensus 151 ~~~~~~~~~l~ 161 (229)
T 2vge_A 151 LMNSGAVYALW 161 (229)
T ss_dssp TSGGGEEEESS
T ss_pred cccCCchHHHH
Confidence 44444444444
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=1.6e-26 Score=220.58 Aligned_cols=164 Identities=21% Similarity=0.267 Sum_probs=143.2
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhh-cCCCCCCccCCCCCCcHHHHHHHcCC----HHHHHHh-hccCCccccccCC
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGK-LDPQTGSVVEDNGLTTPLHRAAVNGD----TGMIREI-ACSESLAKLTSDA 92 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~-~~~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~L-~~~~~~~~~d~~g 92 (399)
...+..|.||||+|+..|+.++|++|++ .|.++ +.+|..|.||+|.++..++ .+++++| +.+++++.+|.+|
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~--n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g 239 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADV--NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERG 239 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGG
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc--CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCC
Confidence 4557789999999999999999999996 58888 8999999999999887654 4578888 9999999999999
Q ss_pred chHHHHHHHcCCHHHHHHHHHh-hhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCH
Q 015882 93 ETALILAVKSSQIDAFKILVEE-TKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTA 171 (399)
Q Consensus 93 ~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tp 171 (399)
+||||+|++.|+.++++.|++. +.+ +|.+|.+|+||||+|++.|+.+++++|+++|+ ++|. .+|
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~~~~------vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA----d~n~-----~~~ 304 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQEHIE------INDTDSDGKTALLLAVELKLKKIAELLCKRGA----STDC-----GDL 304 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTSTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC----SSTT-----CCH
T ss_pred CCHHHHHHHhhhhHHHHHHHHhcCCc------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCC-----CCH
Confidence 9999999999999999999975 334 89999999999999999999999999999999 7765 469
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHccCccCCCCC
Q 015882 172 LDICKANSQDSVSNEIGSILERAAARKQTAPV 203 (399)
Q Consensus 172 l~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~~ 203 (399)
||+|+. .++.+++++|+++||+++..++
T Consensus 305 L~~A~~----~~~~~iv~~Ll~~GA~~d~~~p 332 (337)
T 4g8k_A 305 VMTARR----NYDHSLVKVLLSHGAKEDFHPP 332 (337)
T ss_dssp HHHHHH----TTCHHHHHHHHHTTCCC-----
T ss_pred HHHHHH----cCCHHHHHHHHHCcCCCCCCCC
Confidence 999998 7889999999999999886543
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1e-25 Score=193.46 Aligned_cols=142 Identities=19% Similarity=0.261 Sum_probs=131.8
Q ss_pred hHHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc
Q 015882 3 NELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC 81 (399)
Q Consensus 3 ~e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~ 81 (399)
.++++.|.+... .++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.
T Consensus 27 ~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 102 (169)
T 2y1l_E 27 DDEVRILMANGA--DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV--NAVDHAGMTPLRLAALFGHLEIVEVLLKN 102 (169)
T ss_dssp HHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 367788877653 36788999999999999999999999999999999 88999999999999999999999999 99
Q ss_pred cCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q 015882 82 SESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGS 154 (399)
Q Consensus 82 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g 154 (399)
+.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|++.++.+++++|++.|
T Consensus 103 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD------VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999887 7889999999999999999999999999875
No 67
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=6.5e-26 Score=192.81 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=130.6
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. ..++.+|..|+||||+|+. |+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 19 ~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 93 (162)
T 1ihb_A 19 EQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP--DLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 93 (162)
T ss_dssp HHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5677777544 3367889999999999999 9999999999999999 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
.+++.+|.+|+||||+|++.|+.+++++|++.+++. ++.+|.+|+||||+|+..++.+++++|+++|+
T Consensus 94 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 94 ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN-----VGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC-----CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 999999999999999999999999999999997762 58899999999999999999999999999997
No 68
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1e-26 Score=192.51 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=124.5
Q ss_pred ccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccC-Cch
Q 015882 17 KDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSD-AET 94 (399)
Q Consensus 17 l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~-g~t 94 (399)
.++..|.+|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+. |+.+++++| +.+.+++.+|.. |+|
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP--NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc--CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 35788999999999999999999999999999999 8999999999999999 999999999 999999999999 999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 95 ALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 95 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
|||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|+++|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGAR------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCC------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999877 78999999999999999999999999999887
No 69
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=8.3e-26 Score=203.79 Aligned_cols=167 Identities=20% Similarity=0.145 Sum_probs=151.5
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCcccccc-CCchHH
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTS-DAETAL 96 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~-~g~t~L 96 (399)
...|..|.||||.|+..|+.+++++|++.|.++ +.+|..|.||||+|+..|+.+++++| +.+..++..+. .|+|||
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDV--RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 456889999999999999999999999999998 88999999999999999999999999 77777765554 499999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHH
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICK 176 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~ 176 (399)
|.|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|++.++ +++.+|..|.||+|+|+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGAD------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ----DVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC----CccccCCCCCcHHHHHH
Confidence 999999999999999999877 77899999999999999999999999999999 89999999999999999
Q ss_pred hcCCCCcHHHHHHHHHHccCccCC
Q 015882 177 ANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 177 ~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
.. ....++.++|++.|++.+.
T Consensus 151 ~~---~~~~~~~~~L~~~~~~~~~ 171 (240)
T 3eu9_A 151 YR---THSVDPTRLLLTFNVSVNL 171 (240)
T ss_dssp HH---CCSSTTHHHHHHTTCCTTC
T ss_pred Hh---CChHHHHHHHHhcCCCcch
Confidence 52 2336788999999988764
No 70
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1.2e-26 Score=213.01 Aligned_cols=166 Identities=19% Similarity=0.166 Sum_probs=140.7
Q ss_pred cCCCChHhhHHHhcCCHHHHHHHhh----cCCCCCCccCC----CCCCcHHHHHH---HcCCHHHHHHh-hcc-------
Q 015882 22 NQNGCTSMHRAPVEGDGEMIHCLGK----LDPQTGSVVED----NGLTTPLHRAA---VNGDTGMIREI-ACS------- 82 (399)
Q Consensus 22 d~~G~TpLh~Aa~~G~~~~v~~Ll~----~~~~~~~~~~d----~~g~tpLh~Aa---~~g~~~iv~~L-~~~------- 82 (399)
+..|+||||.|+..|+.+.++.|++ .+.++ +..+ .+|.||||+|+ ..|+.+++++| +.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL--TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT--TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc--chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 4678999999999999996555555 88888 5444 78999999999 67999999999 544
Q ss_pred ----CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccC--------------CCCCcHHHHHHHcCcH
Q 015882 83 ----ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATD--------------KEGNSLLHLAALNKLI 144 (399)
Q Consensus 83 ----~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d--------------~~G~T~LHlA~~~~~~ 144 (399)
...+..|.+|+||||+|+..|+.+++++|++.|++ ++.+| ..|+||||+|+..|+.
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 153 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD------VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP 153 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC------cCccccccccCcccccccccCCCCHHHHHHHcCCH
Confidence 33455566899999999999999999999999887 66666 6899999999999999
Q ss_pred HHHHHHHh---CCCCCcccccccccCCCCHHHHHHhcCCCCc-----HHHHHHHHHHccCccC
Q 015882 145 VIVNLLLE---GSSSDIIQIDSKNNQGQTALDICKANSQDSV-----SNEIGSILERAAARKQ 199 (399)
Q Consensus 145 ~iv~~Ll~---~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~-----~~~i~~~L~~~ga~~~ 199 (399)
+++++|++ .|+ +++.+|.+|+||||+|+..+.... ..+++++|+++|++..
T Consensus 154 ~~v~~Ll~~~~~ga----~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 154 HIVHYLTENGHKQA----DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccccCC----CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 99999999 888 999999999999999996333211 1589999999999875
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=5.7e-26 Score=196.88 Aligned_cols=152 Identities=16% Similarity=0.168 Sum_probs=139.8
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. +..++..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 19 ~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (179)
T 3f6q_A 19 VAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI--NVMNRGDDTPLHLAASHGHRDIVQKLLQYK 95 (179)
T ss_dssp HHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5666666554 4457889999999999999999999999999999999 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccc
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQID 162 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~ 162 (399)
.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|+ +++
T Consensus 96 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~----~~~ 165 (179)
T 3f6q_A 96 ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ----NLN 165 (179)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC----CCS
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc----Ccc
Confidence 99999999999999999999999999999999887 78999999999999999999999999999999 787
Q ss_pred ccccCC
Q 015882 163 SKNNQG 168 (399)
Q Consensus 163 ~~n~~g 168 (399)
..+.++
T Consensus 166 ~~~~~~ 171 (179)
T 3f6q_A 166 RIPYKD 171 (179)
T ss_dssp CBCCCC
T ss_pred cCCccc
Confidence 766554
No 72
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.2e-26 Score=188.82 Aligned_cols=133 Identities=15% Similarity=0.200 Sum_probs=126.0
Q ss_pred CCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccc
Q 015882 48 DPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNA 126 (399)
Q Consensus 48 ~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~ 126 (399)
++++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+. |+.+++++|++.|++ ++.
T Consensus 2 ~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------~~~ 72 (136)
T 1d9s_A 2 SPGI--HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------PNC 72 (136)
T ss_dssp CCCC--SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------SSC
T ss_pred CCCc--cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------CCC
Confidence 3556 78999999999999999999999999 8899999999999999999999 999999999999887 789
Q ss_pred cCCC-CCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCc
Q 015882 127 TDKE-GNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAAR 197 (399)
Q Consensus 127 ~d~~-G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~ 197 (399)
+|.. |+||||+|+..|+.+++++|++.|+ +++.+|..|+||+|+|+. .++.+++++|+++|++
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGA----RLDVCDAWGRLPVDLAEE----QGHRDIARYLHAATGD 136 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCC----CCCCCSSSSSCHHHHHHH----HTCHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCccCCCCCCHHHHHHH----cCCHHHHHHHHHcCCC
Confidence 9999 9999999999999999999999999 999999999999999998 7789999999999975
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.1e-25 Score=188.58 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=129.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+. .+...+..|..|.||||+ +..|+.++++.|+++|+++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 16 ~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 91 (156)
T 1bd8_A 16 QEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP--NVQDTSGTSPVHDAARTGFLDTLKVLVEHG 91 (156)
T ss_dssp HHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 567777666 455678899999999999 9999999999999999999 89999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEG 153 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~ 153 (399)
.+++.+|.+|+||||+|+..|+.+++++|++. ++ ++.+|.+|+||||+|+..|+.+++++|+++
T Consensus 92 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 92 ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD------LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC------TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999987 55 789999999999999999999999999875
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=3.3e-25 Score=187.03 Aligned_cols=136 Identities=15% Similarity=0.148 Sum_probs=125.6
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+...+. ..|..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 16 ~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 90 (153)
T 1awc_B 16 DEVRILMANGAPF---TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR--DARTKVDRTPLHMAASEGHANIVEVLLKHG 90 (153)
T ss_dssp HHHHHHHHHTCCC---CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHcCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcChHHHHHHHHHcC
Confidence 5677776665432 25889999999999999999999999999999 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHH
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLL 150 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~L 150 (399)
.+++.+|.+|+||||+|+.+|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|
T Consensus 91 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 91 ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999887 788999999999999999999999987
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.2e-25 Score=191.95 Aligned_cols=142 Identities=17% Similarity=0.128 Sum_probs=128.8
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. +......|..|.||||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..|+.+++++| +.+
T Consensus 22 ~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 98 (165)
T 3twr_A 22 ETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV--HAKDKGGLVPLHNACSYGHYEVAELLVKHG 98 (165)
T ss_dssp HHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC--CccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Confidence 5566665543 4456778889999999999999999999999999999 89999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+. ++.+++++|++.|+
T Consensus 99 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 99 AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD------PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999999999999999887 78999999999999877 89999999999886
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.3e-26 Score=202.84 Aligned_cols=158 Identities=15% Similarity=0.080 Sum_probs=140.2
Q ss_pred CChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCH----HHHHHh-hccCCccccccCCchHHHHH
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDT----GMIREI-ACSESLAKLTSDAETALILA 99 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~----~iv~~L-~~~~~~~~~d~~g~t~Lh~A 99 (399)
+.++||.|+..|+.+.++.+++.+.+. ..+..|+||||+|+..|+. +++++| +.|++++.+|.+|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 578999999999999999999987543 2237899999999999985 599999 99999999999999999999
Q ss_pred HHcCC------HHHHHHHHHhhhcccccccccccCCCCC-cHHHHHHHcC-----cHHHHHHHHh-CCCCCccccccccc
Q 015882 100 VKSSQ------IDAFKILVEETKRHNREHLFNATDKEGN-SLLHLAALNK-----LIVIVNLLLE-GSSSDIIQIDSKNN 166 (399)
Q Consensus 100 ~~~g~------~~~v~~Ll~~~~~~~~~~lin~~d~~G~-T~LHlA~~~~-----~~~iv~~Ll~-~g~~~~v~~~~~n~ 166 (399)
+..++ .+++++|++.|++ +|.+|.+|+ ||||+|+..+ +.+++++|++ .|+ +++.+|.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga----d~~~~d~ 152 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL----QLLIKDK 152 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC----CTTCCCT
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC----CCcccCC
Confidence 99987 6889999999988 899999999 9999999944 4579999999 899 9999999
Q ss_pred CCCCHHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 167 QGQTALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 167 ~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
.|+||||+|++ .+..+++++|.++..+.+
T Consensus 153 ~G~TpL~~A~~----~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 153 WGLTALEFVKR----CQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp TSCCHHHHHHT----TTCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHH----cCCHHHHHHHHHHHHHHh
Confidence 99999999998 778899999987765443
No 77
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.6e-25 Score=185.21 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=118.8
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHH
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALI 97 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh 97 (399)
......|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+++++..|.+|+||||
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADV--NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLH 85 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 344567899999999999999999999999999 88999999999999999999999999 999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q 015882 98 LAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGS 154 (399)
Q Consensus 98 ~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g 154 (399)
+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGAD------VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCC------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999877 7899999999999999999999999999875
No 78
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=2.4e-25 Score=190.43 Aligned_cols=142 Identities=15% Similarity=0.215 Sum_probs=132.4
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. ..++.+|.+|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 17 ~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 92 (167)
T 3v31_A 17 LYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP--QLLGKGRESALSLACSKGYTDIVKMLLDCG 92 (167)
T ss_dssp HHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 5677776654 337888999999999999999999999999999999 88999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++++.
T Consensus 93 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 93 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD------PTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887 78899999999999999999999999998876
No 79
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.4e-25 Score=179.63 Aligned_cols=124 Identities=32% Similarity=0.461 Sum_probs=119.7
Q ss_pred CCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHc
Q 015882 24 NGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKS 102 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~ 102 (399)
+|+||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999999 88999999999999999999999999 99999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 103 SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 103 g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
|+.+++++|++.|.+ ++.+|.+|+||||+|+..++.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999877 78899999999999999999999999999987
No 80
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=2.9e-25 Score=194.51 Aligned_cols=141 Identities=18% Similarity=0.141 Sum_probs=130.1
Q ss_pred HHHHHHHhcCCccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hcc
Q 015882 4 ELIELAKKDKVQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACS 82 (399)
Q Consensus 4 e~i~~l~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~ 82 (399)
++++.+.+.. ..++..|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| +.+
T Consensus 49 ~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 124 (192)
T 2rfm_A 49 NAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV--NTKDFSGKTPLMWSIIFGYSEMSYFLLEHG 124 (192)
T ss_dssp GGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 5566666543 236778899999999999999999999999999999 89999999999999999999999999 999
Q ss_pred CCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q 015882 83 ESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGS 154 (399)
Q Consensus 83 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g 154 (399)
.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 125 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 125 ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD------ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999887 7899999999999999999999999999864
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=206.87 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=149.8
Q ss_pred cCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccC-CccccccCCchHHHHH
Q 015882 22 NQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSE-SLAKLTSDAETALILA 99 (399)
Q Consensus 22 d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~-~~~~~d~~g~t~Lh~A 99 (399)
+..+.+++|.|+..|+.+.++.+++.+.+...+.+|.+|.||||+|+..|+.+++++| +.+. +++..|..|+||||+|
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHG
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHH
Confidence 3456789999999999999999998776622278999999999999999999999999 7776 9999999999999999
Q ss_pred H-----HcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHH
Q 015882 100 V-----KSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDI 174 (399)
Q Consensus 100 ~-----~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~ 174 (399)
+ ..++.+++++|++.|.. .+..|..|+||||+|+..|+.+++++|++.|+ ++|.+|.+|+||||+
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga----d~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNI------NAKASQAGQTALMLAVSHGRVDVVKALLACEA----DVNVQDDDGSTALMC 222 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCT------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHH
T ss_pred HHHHhhhhhhHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC----CCCCCCCCCCCHHHH
Confidence 9 67889999999998765 67889999999999999999999999999999 999999999999999
Q ss_pred HHhcCCCCcHHHHHHHHHH-ccCccCC
Q 015882 175 CKANSQDSVSNEIGSILER-AAARKQT 200 (399)
Q Consensus 175 a~~~~~~~~~~~i~~~L~~-~ga~~~~ 200 (399)
|+. .++.+++++|++ .|++.+.
T Consensus 223 A~~----~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 223 ACE----HGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHH----HTCHHHHHHHHTSTTCCTTC
T ss_pred HHH----CCCHHHHHHHHhcCCCCCcC
Confidence 998 788999999999 8888764
No 82
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=6.8e-25 Score=208.84 Aligned_cols=164 Identities=16% Similarity=0.122 Sum_probs=141.5
Q ss_pred hHhhHHHhcCCHHHHHHHhhcCCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCC
Q 015882 27 TSMHRAPVEGDGEMIHCLGKLDPQTGSVV-EDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQ 104 (399)
Q Consensus 27 TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~ 104 (399)
+.+|.|+..+..++++.|++.|.++ +. +|.+|.||||+|+..|+.+++++| +.+++++.+|.+|+||||+|+.+|+
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dv--n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNL--NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCS--CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 3468899999999999999999999 77 899999999999999999999999 9999999999999999999999998
Q ss_pred ---HHHHHHHHHhhhcccccccccccCCCCCcHHHHHHH----cCcHHHHHHHHhCCC--------------------CC
Q 015882 105 ---IDAFKILVEETKRHNREHLFNATDKEGNSLLHLAAL----NKLIVIVNLLLEGSS--------------------SD 157 (399)
Q Consensus 105 ---~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~----~~~~~iv~~Ll~~g~--------------------~~ 157 (399)
.++++.|++.+.. .++.+|.+|+||||+|++ .|+.+++++|++.++ ..
T Consensus 177 ~~~~~~~~~ll~~~~~-----~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~ 251 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYP-----CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251 (327)
T ss_dssp HHHTTCHHHHHHHHGG-----GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--------
T ss_pred cccHHHHHHHHHhhhc-----cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc
Confidence 7888888888632 278999999999999999 899999999998732 00
Q ss_pred c---------------------ccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 158 I---------------------IQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 158 ~---------------------v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
. .+++.+|.+|+||||+|+. .++.+++++|+++|++.+..
T Consensus 252 ~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~----~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 252 NDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR----LGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp --------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH----HCCHHHHHHHHHTTCCTTCC
T ss_pred ccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCccc
Confidence 0 0478899999999999998 78899999999999987753
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.4e-24 Score=173.01 Aligned_cols=125 Identities=31% Similarity=0.465 Sum_probs=119.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHH
Q 015882 59 GLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHL 137 (399)
Q Consensus 59 ~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHl 137 (399)
+|.||||+|+..|+.+++++| +.+.+++..|..|.||||.|+..++.+++++|++.+.+ ++.+|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCcHHHH
Confidence 589999999999999999999 88999999999999999999999999999999998877 78899999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCc
Q 015882 138 AALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAAR 197 (399)
Q Consensus 138 A~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~ 197 (399)
|+..++.+++++|++.|+ +++.+|.+|+||+|+|+. .++.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGA----DVNAKDKNGRTPLHLAAR----NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcCC----CCcccCCCCCCHHHHHHH----cCcHHHHHHHHHcCCC
Confidence 999999999999999999 999999999999999998 7889999999999985
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=4.5e-25 Score=182.64 Aligned_cols=128 Identities=21% Similarity=0.222 Sum_probs=117.7
Q ss_pred cccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHH
Q 015882 20 TQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALIL 98 (399)
Q Consensus 20 ~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~ 98 (399)
.+|.+|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|.+|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP--NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHH
Confidence 57889999999999999999999999999999 89999999999999999999999999 9999999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 99 AVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 99 A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..+..+++++|.+.+.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGAS------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999887 78999999999999999998888887776554
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=2.6e-24 Score=177.98 Aligned_cols=127 Identities=24% Similarity=0.356 Sum_probs=118.0
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCc
Q 015882 55 VEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNS 133 (399)
Q Consensus 55 ~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T 133 (399)
.....|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+.+|+.+++++|++.|++ ++.+|.+|+|
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t 82 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------VNAVDAIGFT 82 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 4566788999999999999999999 88999999999999999999999999999999999877 7899999999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHcc
Q 015882 134 LLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 134 ~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~g 195 (399)
|||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|+. .++.+++++|+++|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGA----DVNAQDKFGKTAFDISIG----NGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCC----CCcCcCCCCCCHHHHHHH----CCCHHHHHHHHHcC
Confidence 9999999999999999999999 999999999999999998 78899999999876
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2.8e-24 Score=187.05 Aligned_cols=140 Identities=19% Similarity=0.119 Sum_probs=127.8
Q ss_pred ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccc-cCCchHHHH
Q 015882 21 QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLT-SDAETALIL 98 (399)
Q Consensus 21 ~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d-~~g~t~Lh~ 98 (399)
.|.+|.||||+|+..|+.++++.|++ +.++ +.+|..|.||||+|+..|+.+++++| +++++++.+| .+|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 46789999999999999999999999 8888 88999999999999999999999999 9999999998 889999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhc
Q 015882 99 AVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKAN 178 (399)
Q Consensus 99 A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~ 178 (399)
|+..|+.+++++|++.|++ ++.+|.+|+||||+|++.++. ..+.+|+++++.
T Consensus 117 A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~---------------------~~~~~~l~~a~~- 168 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGAD------IEVEDERGLTALELAREILKT---------------------TPKGNPMQFGRR- 168 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHHHHT---------------------CCCCSHHHHHHH-
T ss_pred HHhcCcHHHHHHHHHcCCC------CcCCCCCCCCHHHHHHHhccC---------------------cccccHHHHHHH-
Confidence 9999999999999999887 789999999999999875421 346799999998
Q ss_pred CCCCcHHHHHHHHHHc
Q 015882 179 SQDSVSNEIGSILERA 194 (399)
Q Consensus 179 ~~~~~~~~i~~~L~~~ 194 (399)
.+..+++++|.++
T Consensus 169 ---~~~~~i~~~L~~~ 181 (183)
T 3deo_A 169 ---IGLEKVINVLEGQ 181 (183)
T ss_dssp ---HHHHHHHHHHHTC
T ss_pred ---cCHHHHHHHHHHh
Confidence 8889999998764
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=6e-25 Score=199.68 Aligned_cols=144 Identities=15% Similarity=0.119 Sum_probs=130.0
Q ss_pred cCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHH
Q 015882 22 NQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAV 100 (399)
Q Consensus 22 d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~ 100 (399)
+..|.||||.|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++| +++++++.+|.+|+||||+|+
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDP--SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSC--CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 467899999999999999999999999998 89999999999999999999999999 999999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcccccccccccCCCCC-cHHHHH--HHcCcHHHHHHHHhCCCCCccccccc---------ccCC
Q 015882 101 KSSQIDAFKILVEETKRHNREHLFNATDKEGN-SLLHLA--ALNKLIVIVNLLLEGSSSDIIQIDSK---------NNQG 168 (399)
Q Consensus 101 ~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~-T~LHlA--~~~~~~~iv~~Ll~~g~~~~v~~~~~---------n~~g 168 (399)
.+|+.+++++|++.|++ ++.+|..|. ||||+| +..|+.+++++|++.++ +++.. +..+
T Consensus 112 ~~~~~~~v~~Ll~~ga~------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a----~~~~~~~~~~~al~d~~~ 181 (239)
T 1ycs_B 112 SCNNVQVCKFLVESGAA------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE----KMGIMNKGVIYALWDYEP 181 (239)
T ss_dssp HTTCHHHHHHHHHTTCC------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH----HTTTTGGGEEEESSCBCC
T ss_pred HcCCHHHHHHHHHcCCC------cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh----cccccccceEEEEeccCC
Confidence 99999999999999888 788888877 999999 78899999999999998 66665 5557
Q ss_pred CCHHHHHHh
Q 015882 169 QTALDICKA 177 (399)
Q Consensus 169 ~Tpl~~a~~ 177 (399)
+++.+++..
T Consensus 182 ~~~~eLa~~ 190 (239)
T 1ycs_B 182 QNDDELPMK 190 (239)
T ss_dssp SSTTBCCBC
T ss_pred CCCCccccc
Confidence 777777664
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=9.2e-25 Score=195.90 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=116.4
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hc-cCCccccccCCchHH
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-AC-SESLAKLTSDAETAL 96 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~-~~~~~~~d~~g~t~L 96 (399)
...|.+|.||||+|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++| .. +.+++.+|.+|+|||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV--NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCc--cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 445778899999999999999999999999998 89999999999999999999999999 66 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCC
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQG 168 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g 168 (399)
|+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.++++.|++.++ ..+..|.+|
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~----~~~~~~~~~ 206 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGAR------TDLRNIEKKLAFDMATNAACASLLKKKQGTDA----VRTLSNAED 206 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCC------SCCCCTTSCCHHHHCCSHHHHHHHC--------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CccccCCCCCHHHHhcchhHHHHHHHHhccch----hhhccchhh
Confidence 999999999999999999888 78999999999999999999999999999998 666666554
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=2.5e-24 Score=178.14 Aligned_cols=127 Identities=21% Similarity=0.209 Sum_probs=116.1
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCc
Q 015882 55 VEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNS 133 (399)
Q Consensus 55 ~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T 133 (399)
.+|.+|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|.+|+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------VNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------ccCcCCCCCC
Confidence 4789999999999999999999999 99999999999999999999999999999999999877 7889999999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHcc
Q 015882 134 LLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 134 ~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~g 195 (399)
|||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|.. .+..++.++|.+.+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~----~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGA----SRNAVNIFGLRPVDYTDD----ESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCGGGGCCC----HHHHHHHSCC----
T ss_pred HHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHhh----ccHHHHHhhccccc
Confidence 9999999999999999999999 999999999999999986 66777777766554
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=3.5e-24 Score=195.36 Aligned_cols=143 Identities=19% Similarity=0.127 Sum_probs=130.2
Q ss_pred ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccc-cCCchHHHH
Q 015882 21 QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLT-SDAETALIL 98 (399)
Q Consensus 21 ~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d-~~g~t~Lh~ 98 (399)
.+.+|.||||+|+..|+.++++.|++ +.++ +.+|..|.||||+|+..|+.+++++| +++++++.+| ..|+||||+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT--TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC--CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 35689999999999999999999999 8888 89999999999999999999999999 9999999998 789999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhc
Q 015882 99 AVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKAN 178 (399)
Q Consensus 99 A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~ 178 (399)
|+.+|+.+++++|++.|++ ++.+|.+|+||||+|+..+ .+..+.||+|+|+.
T Consensus 118 A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~t~l~~A~~~~---------------------~~~~~~~~l~~a~~- 169 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGAD------IEVEDERGLTALELAREIL---------------------KTTPKGNPMQFGRR- 169 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHH---------------------TTCCCSSHHHHHHH-
T ss_pred HHHcCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHHHH---------------------hccCCCCHHHHHHH-
Confidence 9999999999999999887 7899999999999998632 12567999999998
Q ss_pred CCCCcHHHHHHHHHHccCc
Q 015882 179 SQDSVSNEIGSILERAAAR 197 (399)
Q Consensus 179 ~~~~~~~~i~~~L~~~ga~ 197 (399)
.++.+++++|.+++.+
T Consensus 170 ---~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 170 ---IGLEKVINVLEGQVFE 185 (244)
T ss_dssp ---HHHHHHHHHHHHHHEE
T ss_pred ---cChHHHHHHHHHhccc
Confidence 8899999999987654
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.8e-24 Score=189.18 Aligned_cols=136 Identities=10% Similarity=0.060 Sum_probs=120.4
Q ss_pred cccc-CCCChHhhHHHhcCCH----HHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCC------HHHHHHh-hccCCcc
Q 015882 19 STQN-QNGCTSMHRAPVEGDG----EMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGD------TGMIREI-ACSESLA 86 (399)
Q Consensus 19 ~~~d-~~G~TpLh~Aa~~G~~----~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~------~~iv~~L-~~~~~~~ 86 (399)
+..+ ..|+||||+|+..|+. +++++|+++|+++ +.+|.+|+||||+|+..|+ .+++++| +.|++++
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv--n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin 108 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI--KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT 108 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS--SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC
Confidence 3344 7799999999999985 5999999999999 8999999999999999987 6889999 9999999
Q ss_pred ccccCCc-hHHHHHHHcC-----CHHHHHHHHH-hhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcc
Q 015882 87 KLTSDAE-TALILAVKSS-----QIDAFKILVE-ETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDII 159 (399)
Q Consensus 87 ~~d~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v 159 (399)
.+|.+|+ ||||+|+..+ +.+++++|++ .|++ ++.+|.+|+||||+|++.++.+++++|.+...
T Consensus 109 ~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~---- 178 (186)
T 3t8k_A 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK---- 178 (186)
T ss_dssp SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH----
T ss_pred ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH----
Confidence 9999999 9999999954 4569999999 8887 89999999999999999999999999998765
Q ss_pred ccccccc
Q 015882 160 QIDSKNN 166 (399)
Q Consensus 160 ~~~~~n~ 166 (399)
..+.+++
T Consensus 179 ~~~~~~~ 185 (186)
T 3t8k_A 179 KYNLKEN 185 (186)
T ss_dssp HHTCCC-
T ss_pred HHhcccC
Confidence 5555543
No 92
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=3.4e-24 Score=181.51 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=118.2
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCC
Q 015882 54 VVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGN 132 (399)
Q Consensus 54 ~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~ 132 (399)
...+..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+ .|+.+++++|++.|++ ++.+|..|+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~------~~~~d~~g~ 78 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE------PNCADPATL 78 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC------CCCCCTTTC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC------CCCcCCCCC
Confidence 56788899999999999999999999 889999999999999999985 9999999999999877 889999999
Q ss_pred c-HHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 133 S-LLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 133 T-~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
| |||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+. .++.+++++|+++|++....
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~----~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGA----RLDVRDAWGRLPVDLAEE----LGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTC----CSSCCCTTCCCHHHHHHH----HTCHHHHHHHSSCC------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCC----CCcccCCCCCCHHHHHHH----hCHHHHHHHHHHcCCCCCcc
Confidence 9 9999999999999999999999 999999999999999998 78899999999999987753
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=7.6e-24 Score=171.92 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=104.4
Q ss_pred ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHH
Q 015882 21 QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILA 99 (399)
Q Consensus 21 ~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A 99 (399)
.+..|.||||+|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++| +.+.+++.+|.+|+||||+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV--NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT--TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 3567899999999999999999999999998 88999999999999999999999999 99999999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcC
Q 015882 100 VKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNK 142 (399)
Q Consensus 100 ~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~ 142 (399)
+..|+.+++++|++.|++ ++.+|.+|+||||+|...+
T Consensus 81 ~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGAD------KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHCCCHH
T ss_pred HHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHhCCHH
Confidence 999999999999999887 7899999999999994433
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=1.9e-23 Score=196.52 Aligned_cols=137 Identities=16% Similarity=0.060 Sum_probs=124.0
Q ss_pred CCCChHhhHHHhcCCHHHHHHHhhcCCCCCCcc------CCCCCCcHHHHHHHc---CCHHHHHHh-hccCCccccccCC
Q 015882 23 QNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVV------EDNGLTTPLHRAAVN---GDTGMIREI-ACSESLAKLTSDA 92 (399)
Q Consensus 23 ~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~------~d~~g~tpLh~Aa~~---g~~~iv~~L-~~~~~~~~~d~~g 92 (399)
..+.++||.|+..|+.+.++.|++.++++ +. .|..|.||||+|+.. |+.+++++| +++++++.+|.+|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~--~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDF--GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCT--TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcc--cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 34567899999999999999999999998 55 689999999999997 899999999 8999999999999
Q ss_pred chHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHH
Q 015882 93 ETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTAL 172 (399)
Q Consensus 93 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl 172 (399)
+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.++ + .|.|||
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga----~------~g~tpL 290 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQA----G------TFAFPL 290 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH----H------TTSSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC----C------CCCChh
Confidence 9999999999999999999999888 78999999999999999999999999999887 3 689999
Q ss_pred HHHHh
Q 015882 173 DICKA 177 (399)
Q Consensus 173 ~~a~~ 177 (399)
|+|+.
T Consensus 291 h~A~~ 295 (301)
T 2b0o_E 291 HVDYS 295 (301)
T ss_dssp C----
T ss_pred HHHHh
Confidence 99997
No 95
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=3.9e-23 Score=186.71 Aligned_cols=147 Identities=17% Similarity=0.167 Sum_probs=125.2
Q ss_pred HHHHhhcCCCCC-CccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcc
Q 015882 41 IHCLGKLDPQTG-SVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRH 118 (399)
Q Consensus 41 v~~Ll~~~~~~~-~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 118 (399)
++.|++++.++. .+..+.+|.||||+|+..|+.+++++| +.+.+++.+|.+|+||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN- 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 467888887762 123455677889999999999999999 98999999999999999999999999999999999887
Q ss_pred cccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccc-cCCCCHHHHH--HhcCCCCcHHHHHHHHHHcc
Q 015882 119 NREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKN-NQGQTALDIC--KANSQDSVSNEIGSILERAA 195 (399)
Q Consensus 119 ~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n-~~g~Tpl~~a--~~~~~~~~~~~i~~~L~~~g 195 (399)
+|.+|.+|+||||+|+..|+.+++++|++.|+ +++.++ .+|+||||+| +. .++.+++++|+++|
T Consensus 80 -----~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga----~~~~~~~~~g~tpL~~A~a~~----~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 80 -----VNSPDSHGWTPLHCAASCNDTVICMALVQHGA----AIFATTLSDGATAFEKCDPYR----EGYADCATYLADVE 146 (229)
T ss_dssp -----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC----CTTCCCSSTTCCTGGGCCTTS----TTHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CcccccCCCCCCHHHHHHHHh----cChHHHHHHHHHcC
Confidence 88999999999999999999999999999999 899986 6999999999 66 78999999999999
Q ss_pred CccCCC
Q 015882 196 ARKQTA 201 (399)
Q Consensus 196 a~~~~~ 201 (399)
++.+..
T Consensus 147 a~~~~~ 152 (229)
T 2vge_A 147 QSMGLM 152 (229)
T ss_dssp HHTTTS
T ss_pred CCcccc
Confidence 987753
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=6.2e-23 Score=166.49 Aligned_cols=112 Identities=21% Similarity=0.244 Sum_probs=103.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcH
Q 015882 56 EDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSL 134 (399)
Q Consensus 56 ~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~ 134 (399)
.+..|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..|+.+++++|++.|++ +|.+|.+|+||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~tp 76 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------INAPDKHHITP 76 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTSCCH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCH
Confidence 356788999999999999999999 99999999999999999999999999999999998877 88999999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 135 LHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 135 LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
||+|+..++.+++++|++.|+ +++.+|.+|+||+|+|..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGA----DKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999 999999999999999953
No 97
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=1.4e-24 Score=210.17 Aligned_cols=159 Identities=14% Similarity=0.066 Sum_probs=132.0
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCC-CccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCc---cccccCCc
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTG-SVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESL---AKLTSDAE 93 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~-~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~---~~~d~~g~ 93 (399)
..++.+++||||+|+..|+.++|++|+++++... ....|..|.||||+||..|+.+++++| +.+++. +..+.+ +
T Consensus 86 ~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 86 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-Y 164 (376)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-H
T ss_pred HHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-C
Confidence 3456678899999999999999999999987321 023456788999999999999999999 887642 222333 9
Q ss_pred hHHHHHHHcCCHHHHHHHHHhhhcccccccccc--cCCCCCcHHHHHH-HcCcHHHHHHHHhCCCCCcccccccccCCCC
Q 015882 94 TALILAVKSSQIDAFKILVEETKRHNREHLFNA--TDKEGNSLLHLAA-LNKLIVIVNLLLEGSSSDIIQIDSKNNQGQT 170 (399)
Q Consensus 94 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~--~d~~G~T~LHlA~-~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~T 170 (399)
||||+|+.+|+.+++++|++.|++ ++. +|.+|+||||+|+ ..|+.+++++|++.|+ + |.|
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga~------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga----~-------~~t 227 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAPT------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV----M-------LAY 227 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGG------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH----H-------HHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCc------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC----c-------cch
Confidence 999999999999999999999887 555 8888999999999 9999999999999765 2 789
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 171 ALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 171 pl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
|+|+|+. .++.+++++|+++|++..
T Consensus 228 aL~~Aa~----~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 228 AEIHEFE----YGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHHCTTT----TTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHH----CCCHHHHHHHHhcCcccc
Confidence 9999998 778889999999998754
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=3.7e-24 Score=186.35 Aligned_cols=110 Identities=22% Similarity=0.341 Sum_probs=105.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccC-CCCCcH
Q 015882 57 DNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATD-KEGNSL 134 (399)
Q Consensus 57 d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d-~~G~T~ 134 (399)
+.+|.||||+|+..|+.++++.| + +.+++.+|.+|+||||+|+..|+.+++++|++.|++ +|.+| .+|+||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------LDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCCH
Confidence 56889999999999999999999 8 899999999999999999999999999999999887 77888 889999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 135 LHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 135 LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
||+|+..|+.+++++|++.|+ +++.+|.+|+||+|+|++
T Consensus 114 L~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELGA----DIEVEDERGLTALELARE 152 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHTC----CTTCCCTTSCCHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcCC----CCcCCCCCCCCHHHHHHH
Confidence 999999999999999999999 999999999999999996
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=3.8e-22 Score=192.34 Aligned_cols=147 Identities=16% Similarity=0.075 Sum_probs=118.7
Q ss_pred cCCCChHhhHHHhc-CCHHHHHHHhhcCCCCCCccCC--CCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHH
Q 015882 22 NQNGCTSMHRAPVE-GDGEMIHCLGKLDPQTGSVVED--NGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALI 97 (399)
Q Consensus 22 d~~G~TpLh~Aa~~-G~~~~v~~Ll~~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh 97 (399)
+..+.||||.|+.. |+.++++.|+++|+++ +..+ .+|.||||+|+..|+.+++++| +++++++..|.+|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv--n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV--NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC--CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 44567899999999 9999999999999999 6777 8999999999999999999999 999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 98 LAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 98 ~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.+++++|++.+. ...+....+..+.|+++++..
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~-~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGAD------LGARDSEGRDPLTIAMETANADIVTLLRLAKM-REAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CcccccccCCCCCCHHHHHHH
Confidence 99999999999999999887 78999999999999999999999999998875 222455667888999998875
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=9.7e-23 Score=182.66 Aligned_cols=169 Identities=22% Similarity=0.232 Sum_probs=132.9
Q ss_pred ccccCCCChHhhHHHhcCCHHHHHHHhhcCCCC-------------CCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCC
Q 015882 19 STQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQT-------------GSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSES 84 (399)
Q Consensus 19 ~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~-------------~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~ 84 (399)
...+.++.++.+++...|+...+..+.+.+.-. .....+.+|.||||+|+..|+.++++.| +.+.+
T Consensus 19 al~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 98 (222)
T 3ehr_A 19 ALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG 98 (222)
T ss_dssp ESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred EeCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCC
Confidence 345677888888888888764443322211000 0023456789999999999999999999 99999
Q ss_pred ccccccCCchHHHHHHHcCCHHHHHHHHHh-hhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccc
Q 015882 85 LAKLTSDAETALILAVKSSQIDAFKILVEE-TKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDS 163 (399)
Q Consensus 85 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~ 163 (399)
++.+|..|+||||+|+.+|+.+++++|++. +++ +|.+|.+|+||||+|+..|+.+++++|++.|+ +++.
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~ 168 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------LNQQNKLGDTALHAAAWKGYADIVQLLLAKGA----RTDL 168 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC----CSCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcc
Confidence 999999999999999999999999999997 666 88999999999999999999999999999999 9999
Q ss_pred cccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCC
Q 015882 164 KNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTA 201 (399)
Q Consensus 164 ~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~ 201 (399)
+|.+|+||+|+|+. .+..++++.|++.|+.....
T Consensus 169 ~~~~g~t~l~~A~~----~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 169 RNIEKKLAFDMATN----AACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp CCTTSCCHHHHCCS----HHHHHHHC------------
T ss_pred ccCCCCCHHHHhcc----hhHHHHHHHHhccchhhhcc
Confidence 99999999999997 78999999999999887654
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=8.4e-21 Score=176.41 Aligned_cols=165 Identities=23% Similarity=0.265 Sum_probs=138.1
Q ss_pred ccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCC---c---------------------cC-----CCCCCcHHHHHHHcC
Q 015882 21 QNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGS---V---------------------VE-----DNGLTTPLHRAAVNG 71 (399)
Q Consensus 21 ~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~---~---------------------~~-----d~~g~tpLh~Aa~~g 71 (399)
.|..+.++|+.+...|+..+.+.+...-+.... . .. +....++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 577889999999999998776666433221100 0 00 011236899999999
Q ss_pred CHHHHHHh-hccCC------ccccccCCchHHHHHHHc---CCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHc
Q 015882 72 DTGMIREI-ACSES------LAKLTSDAETALILAVKS---SQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALN 141 (399)
Q Consensus 72 ~~~iv~~L-~~~~~------~~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~ 141 (399)
+.+.++.+ ..+.+ ++..|..|+||||+|+.. |+.+++++|++.|++ +|.+|.+|+||||+|+..
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~------in~~d~~g~TpLh~A~~~ 215 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN------LDKQTGKGSTALHYCCLT 215 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC------TTCCCTTCCCHHHHHHHT
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC------ccccCCCCCCHHHHHHHc
Confidence 99999988 66666 445588899999999999 899999999999887 889999999999999999
Q ss_pred CcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 142 KLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 142 ~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++++|+++|+...
T Consensus 216 g~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 216 DNAECLKLLLRGKA----SIEIANESGETPLDIAKR----LKHEHCEELLTQALSGRF 265 (278)
T ss_dssp TCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCC----CCCCccCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCC
Confidence 99999999999999 999999999999999998 788999999999998654
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2.7e-21 Score=194.33 Aligned_cols=134 Identities=16% Similarity=0.070 Sum_probs=117.2
Q ss_pred CChHhhHHHhcCCHHHHHHHhhcCCCCCCccC------CCCCCcHHHHHHH---cCCHHHHHHh-hccCCccccccCCch
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVE------DNGLTTPLHRAAV---NGDTGMIREI-ACSESLAKLTSDAET 94 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~iv~~L-~~~~~~~~~d~~g~t 94 (399)
..+.||.|+..|+.+.++.|++.|+++ +.+ |..|.||||+|+. .|+.+++++| +++++++.+|.+|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~--n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF--GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS--SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc--cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCc
Confidence 447899999999999999999999998 655 8899999999966 9999999999 999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHH
Q 015882 95 ALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDI 174 (399)
Q Consensus 95 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~ 174 (399)
|||+|+.+|+.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++++|++.|+ +++. ||+|.
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga----~~~~------~~~h~ 273 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQA----GTFA------FPLHV 273 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCC------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC----CCCC------Cccee
Confidence 99999999999999999999988 88999999999999999999999999999999 7765 56666
Q ss_pred HH
Q 015882 175 CK 176 (399)
Q Consensus 175 a~ 176 (399)
+.
T Consensus 274 ~~ 275 (497)
T 3lvq_E 274 DY 275 (497)
T ss_dssp --
T ss_pred ec
Confidence 54
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=3.9e-23 Score=188.42 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=124.9
Q ss_pred CCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHH
Q 015882 23 QNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVK 101 (399)
Q Consensus 23 ~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~ 101 (399)
..|.+++..++..|+.+.+..+...+.+ .+.+|.||||+|++.|+.++++.| . +.+++.+|.+|+||||+|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD-----VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH-----HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHH
T ss_pred CCCccHHHHHHHcCCCcccccccccccc-----cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 5677888888888887776665554433 356799999999999999999999 8 88999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcccccccccccC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHh
Q 015882 102 SSQIDAFKILVEETKRHNREHLFNATD-KEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKA 177 (399)
Q Consensus 102 ~g~~~~v~~Ll~~~~~~~~~~lin~~d-~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~ 177 (399)
+|+.+++++|++.|++ +|.+| ..|+||||+|+..|+.+++++|+++|+ +++.+|.+|+||+|+|+.
T Consensus 87 ~g~~~~v~~Ll~~ga~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGAD------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGA----DIEVEDERGLTALELARE 153 (244)
T ss_dssp HTCHHHHHHHHHTTCC------TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCC------CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHH
Confidence 9999999999999887 77888 889999999999999999999999999 999999999999999986
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=2.7e-23 Score=201.07 Aligned_cols=139 Identities=9% Similarity=0.044 Sum_probs=113.5
Q ss_pred hHHHHHHHhcCCcc-ccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCC-ccCCCCCCcHHHHHHHcCCHHHHHHh-
Q 015882 3 NELIELAKKDKVQE-KDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGS-VVEDNGLTTPLHRAAVNGDTGMIREI- 79 (399)
Q Consensus 3 ~e~i~~l~~~~~~~-l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~-~~~d~~g~tpLh~Aa~~g~~~iv~~L- 79 (399)
.++++.|.+...+. .....|..|.||||+|+..|+.++|++|+++|++... +..+.+ .||||+|+..|+.+++++|
T Consensus 105 ~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll 183 (376)
T 2aja_A 105 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLC 183 (376)
T ss_dssp HHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHH
Confidence 36778887665432 2334566789999999999999999999999976310 223333 8999999999999999999
Q ss_pred hccCCccc--cccCCchHHHHHH-HcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 80 ACSESLAK--LTSDAETALILAV-KSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 80 ~~~~~~~~--~d~~g~t~Lh~A~-~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
+.+++++. .|.+|+||||+|+ .+|+.+++++|++.|+. |+||||+|++.|+.+++++|++.|+
T Consensus 184 ~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------------~~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 184 ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------------LAYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------------HHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------------cchHHHHHHHCCCHHHHHHHHhcCc
Confidence 88988887 8899999999999 99999999999986532 7899999999999999999998765
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=6.7e-21 Score=177.09 Aligned_cols=125 Identities=18% Similarity=0.091 Sum_probs=117.0
Q ss_pred CChHhhHHHhcCCHHHHHHHhhcCCCCC----CccCCCCCCcHHHHHHHc---CCHHHHHHh-hccCCccccccCCchHH
Q 015882 25 GCTSMHRAPVEGDGEMIHCLGKLDPQTG----SVVEDNGLTTPLHRAAVN---GDTGMIREI-ACSESLAKLTSDAETAL 96 (399)
Q Consensus 25 G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~----~~~~d~~g~tpLh~Aa~~---g~~~iv~~L-~~~~~~~~~d~~g~t~L 96 (399)
..++||.|+..|+.+.++.+++.|.++. .+..|..|.||||+|+.. |+.+++++| +.+++++.+|.+|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 3579999999999999999999999863 145588999999999999 899999999 99999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 015882 97 ILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 97 h~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~ 155 (399)
|+|+.+|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|++.|+
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS------IEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999888 88999999999999999999999999999988
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=6.7e-21 Score=146.61 Aligned_cols=91 Identities=26% Similarity=0.393 Sum_probs=69.1
Q ss_pred CCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHc
Q 015882 24 NGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKS 102 (399)
Q Consensus 24 ~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~ 102 (399)
+|+||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++| +.+++++.+|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 4777888888888888888888877777 67777777777777777777777777 77777777777777777777777
Q ss_pred CCHHHHHHHHHhhh
Q 015882 103 SQIDAFKILVEETK 116 (399)
Q Consensus 103 g~~~~v~~Ll~~~~ 116 (399)
|+.+++++|++.|+
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 77777777777654
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.9e-20 Score=143.02 Aligned_cols=91 Identities=34% Similarity=0.500 Sum_probs=86.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHH
Q 015882 59 GLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHL 137 (399)
Q Consensus 59 ~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHl 137 (399)
+|+||||+|+..|+.+++++| +.+.+++.+|.+|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHH
Confidence 489999999999999999999 99999999999999999999999999999999999887 78999999999999
Q ss_pred HHHcCcHHHHHHHHhCCC
Q 015882 138 AALNKLIVIVNLLLEGSS 155 (399)
Q Consensus 138 A~~~~~~~iv~~Ll~~g~ 155 (399)
|+..|+.+++++|++.|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 999999999999999987
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7.6e-21 Score=152.11 Aligned_cols=107 Identities=23% Similarity=0.271 Sum_probs=94.0
Q ss_pred cccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHH
Q 015882 20 TQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALIL 98 (399)
Q Consensus 20 ~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~ 98 (399)
.+|.+|+||||+|+..|+.++++.|+++++++ +.+|..|.||||+|+..|+.+++++| +.+++++.+|.+|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV--NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS--SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 46788999999999999999999999999888 78899999999999999999999999 8888888889999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccccccccCCCCCcH
Q 015882 99 AVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSL 134 (399)
Q Consensus 99 A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~ 134 (399)
|+..|+.+++++|++.|++ +|.++..|.||
T Consensus 82 A~~~~~~~~~~~Ll~~ga~------~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGAD------VNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSS------HHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCC------CCcCCcccccc
Confidence 9999999999999988877 77888888876
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=5.2e-20 Score=173.00 Aligned_cols=127 Identities=28% Similarity=0.369 Sum_probs=117.9
Q ss_pred CCcHHHHHHHcCCHHHHHHh-hccCCccc------cccCCchHHHHHHHc---CCHHHHHHHHHhhhcccccccccccCC
Q 015882 60 LTTPLHRAAVNGDTGMIREI-ACSESLAK------LTSDAETALILAVKS---SQIDAFKILVEETKRHNREHLFNATDK 129 (399)
Q Consensus 60 g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~------~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~lin~~d~ 129 (399)
+.++||.|+..|+.+.++.| ..+.+++. .|..|+||||+|+.. ++.+++++|++.|++ +|.+|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad------vn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC------TTCCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC------CCCCCC
Confidence 44679999999999999999 88888887 688999999999997 899999999999887 889999
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCC
Q 015882 130 EGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQT 200 (399)
Q Consensus 130 ~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~ 200 (399)
+|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++++|+++|++...
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~ga----d~~~~d~~G~TpL~~A~~----~~~~~iv~~Ll~~ga~~g~ 287 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRA----LVGTVNEAGETALDIARK----KHHKECEELLEQAQAGTFA 287 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC----CCSCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999 999999999999999998 7888999999999988543
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.3e-20 Score=150.72 Aligned_cols=108 Identities=27% Similarity=0.351 Sum_probs=101.1
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCc
Q 015882 55 VEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNS 133 (399)
Q Consensus 55 ~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T 133 (399)
.+|.+|.||||+|+..|+.+++++| +.+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------VNARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------TTCCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCC
Confidence 5789999999999999999999999 88999999999999999999999999999999999877 7899999999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHH
Q 015882 134 LLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTAL 172 (399)
Q Consensus 134 ~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl 172 (399)
|||+|+..++.+++++|++.|+ ++|.++..|.||-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga----~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGA----DVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSS----SHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcCC----CCCcCCccccccc
Confidence 9999999999999999999999 9999999999885
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=8.7e-20 Score=183.36 Aligned_cols=129 Identities=29% Similarity=0.377 Sum_probs=116.6
Q ss_pred CCcHHHHHHHcCCHHHHHHh-hccCCcccc------ccCCchHHHHHHH---cCCHHHHHHHHHhhhcccccccccccCC
Q 015882 60 LTTPLHRAAVNGDTGMIREI-ACSESLAKL------TSDAETALILAVK---SSQIDAFKILVEETKRHNREHLFNATDK 129 (399)
Q Consensus 60 g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~------d~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~~~lin~~d~ 129 (399)
..+.||.|+..|+.+.++.| ..+++++.. |..|+||||+|+. .|+.+++++|++.|++ +|.+|.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~------vn~~d~ 205 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 205 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC------TTCCCS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC------CCccCC
Confidence 34679999999999999999 889998877 8899999999976 9999999999999888 899999
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccCCCC
Q 015882 130 EGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQTAP 202 (399)
Q Consensus 130 ~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~~~~ 202 (399)
+|+||||+|+..|+.+++++|+++|+ +++.+|.+|+||||+|+. .++.+++++|+++|++....+
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRA----LVGTVNEAGETALDIARK----KHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCC----CCSCCCTTCCCHHHHHHH----TTCHHHHHHHHHTCC------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCCHHHHHHH----cCCHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999 999999999999999998 889999999999999988753
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=9.1e-20 Score=175.72 Aligned_cols=130 Identities=20% Similarity=0.277 Sum_probs=118.5
Q ss_pred CCCCCCcHHHHHHHc-CCHHHHHHh-hccCCccccc--cCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCC
Q 015882 56 EDNGLTTPLHRAAVN-GDTGMIREI-ACSESLAKLT--SDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEG 131 (399)
Q Consensus 56 ~d~~g~tpLh~Aa~~-g~~~iv~~L-~~~~~~~~~d--~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G 131 (399)
.+..+.||||.|+.. |+.++++.| ..+++++..+ .+|+||||+|+..|+.+++++|++.|++ +|.+|.+|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------vn~~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN------VNQADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCCCCCC
Confidence 344566899999999 999999999 9999999998 8899999999999999999999999887 88999999
Q ss_pred CcHHHHHHHcCcHHHHHHHHhCCCCCcccccccccCCCCHHHHHHhcCCCCcHHHHHHHHHHccCccC
Q 015882 132 NSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSKNNQGQTALDICKANSQDSVSNEIGSILERAAARKQ 199 (399)
Q Consensus 132 ~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~n~~g~Tpl~~a~~~~~~~~~~~i~~~L~~~ga~~~ 199 (399)
+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+. .++.+++++|++++....
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Ga----d~~~~d~~G~TpL~~A~~----~g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGA----DLGARDSEGRDPLTIAME----TANADIVTLLRLAKMREA 328 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHC---
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcC----CCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCcc
Confidence 999999999999999999999999 999999999999999998 788999999999886544
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=2.6e-18 Score=136.42 Aligned_cols=96 Identities=19% Similarity=0.248 Sum_probs=78.2
Q ss_pred CccccccccCCCChHhhHHHhcCCHHHHHHHhhcCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHh-hccCCccccccCC
Q 015882 14 VQEKDSTQNQNGCTSMHRAPVEGDGEMIHCLGKLDPQTGSVVEDNGLTTPLHRAAVNGDTGMIREI-ACSESLAKLTSDA 92 (399)
Q Consensus 14 ~~~l~~~~d~~G~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~L-~~~~~~~~~d~~g 92 (399)
.|......|.+|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++| ..+++++.+|..|
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i--~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 90 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV--AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Confidence 34556777889999999999999999999999999888 78888999999999999999999998 8888888888889
Q ss_pred chHHHHHHHcCCHHHHHHH
Q 015882 93 ETALILAVKSSQIDAFKIL 111 (399)
Q Consensus 93 ~t~Lh~A~~~g~~~~v~~L 111 (399)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999888875
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=3.2e-17 Score=130.10 Aligned_cols=93 Identities=32% Similarity=0.477 Sum_probs=51.8
Q ss_pred ccccccCCchHHHHHHHcCCHHHHHHHHHhhhcccccccccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCccccccc
Q 015882 85 LAKLTSDAETALILAVKSSQIDAFKILVEETKRHNREHLFNATDKEGNSLLHLAALNKLIVIVNLLLEGSSSDIIQIDSK 164 (399)
Q Consensus 85 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~lin~~d~~G~T~LHlA~~~~~~~iv~~Ll~~g~~~~v~~~~~ 164 (399)
....|.+|+|+||.|+..|+.+++++|++.+++ +|.+|..|+||||+|+..|+.+++++|++.|+ +++.+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga----~~~~~ 86 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD------VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA----DVXAQ 86 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC----Ccccc
Confidence 344455566666666666666666666655444 45555666666666666666666666666655 55666
Q ss_pred ccCCCCHHHHHHhcCCCCcHHHHHHHH
Q 015882 165 NNQGQTALDICKANSQDSVSNEIGSIL 191 (399)
Q Consensus 165 n~~g~Tpl~~a~~~~~~~~~~~i~~~L 191 (399)
|..|+||+|+|+. .++.+++++|
T Consensus 87 d~~g~tpl~~A~~----~~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISID----NGNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHHH----HTCHHHHHHH
T ss_pred ccCCCcHHHHHHH----cCCHHHHHHh
Confidence 6666666666665 4455555544
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.96 E-value=56 Score=19.46 Aligned_cols=18 Identities=33% Similarity=0.327 Sum_probs=13.9
Q ss_pred hhHHHhcCCHHHHHHHhh
Q 015882 29 MHRAPVEGDGEMIHCLGK 46 (399)
Q Consensus 29 Lh~Aa~~G~~~~v~~Ll~ 46 (399)
+..||..|+.+.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 567888888888887743
Done!