Query 015885
Match_columns 398
No_of_seqs 329 out of 1676
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 04:13:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dmh_A Myoferlin; beta-sandwic 99.9 1.3E-21 4.5E-26 164.2 15.4 129 261-396 4-136 (140)
2 3b7y_A E3 ubiquitin-protein li 99.9 3.2E-21 1.1E-25 164.4 16.2 125 261-393 17-153 (153)
3 1wfj_A Putative elicitor-respo 99.9 1.4E-21 4.7E-26 163.2 13.2 124 261-396 7-133 (136)
4 2ep6_A MCTP2 protein; beta san 99.9 3.2E-21 1.1E-25 160.4 13.4 125 258-393 7-132 (133)
5 2fk9_A Protein kinase C, ETA t 99.9 3.8E-21 1.3E-25 163.9 12.4 114 261-388 26-154 (157)
6 3kwu_A MUNC13-1; calcium bindi 99.9 2.3E-20 7.9E-25 158.1 17.1 120 262-392 15-146 (148)
7 1gmi_A Protein kinase C, epsil 99.8 1.1E-20 3.7E-25 157.9 12.9 117 262-394 4-134 (136)
8 3m7f_B E3 ubiquitin-protein li 99.8 3.2E-20 1.1E-24 162.0 16.3 126 261-394 5-142 (176)
9 1rlw_A Phospholipase A2, CALB 99.8 3.3E-20 1.1E-24 152.7 13.3 116 263-388 2-122 (126)
10 3pyc_A E3 ubiquitin-protein li 99.8 7.9E-20 2.7E-24 151.7 15.1 121 263-388 4-130 (132)
11 2nq3_A Itchy homolog E3 ubiqui 99.8 1.6E-19 5.5E-24 156.9 14.7 126 261-396 33-164 (173)
12 2z0u_A WW domain-containing pr 99.8 1.4E-19 4.6E-24 154.5 9.7 111 256-366 35-154 (155)
13 3f04_A Synaptotagmin-1; C2A, c 99.8 7E-19 2.4E-23 148.0 11.9 112 256-367 26-142 (143)
14 1rsy_A Synaptotagmin I; calciu 99.8 8.7E-19 3E-23 149.1 12.5 112 256-367 34-150 (152)
15 2b3r_A Phosphatidylinositol-4- 99.8 1.1E-18 3.8E-23 145.2 12.8 107 260-367 16-130 (134)
16 2d8k_A Synaptotagmin VII; exoc 99.8 7.8E-19 2.7E-23 147.4 11.5 111 257-367 19-135 (141)
17 2bwq_A Regulating synaptic mem 99.8 1.1E-18 3.8E-23 144.0 11.4 109 256-365 10-128 (129)
18 2chd_A Rabphilin-3A, exophilin 99.8 1.1E-18 3.8E-23 146.6 10.9 112 256-367 21-140 (142)
19 1wfm_A Synaptotagmin XIII; C2 99.8 3.6E-18 1.2E-22 142.9 13.5 109 256-367 18-132 (138)
20 3fdw_A Synaptotagmin-like prot 99.8 1.3E-18 4.4E-23 147.4 10.5 113 256-368 15-135 (148)
21 2r83_A Synaptotagmin-1; C2A-C2 99.8 5.2E-18 1.8E-22 159.1 15.7 133 256-394 11-148 (284)
22 1v27_A Regulating synaptic mem 99.8 9.5E-19 3.2E-23 146.7 8.9 109 258-367 15-133 (141)
23 1a25_A CALB, protein kinase C 99.8 4.4E-18 1.5E-22 144.2 12.2 105 262-367 29-139 (149)
24 1ugk_A Synaptotagmin IV, KIAA1 99.8 7E-18 2.4E-22 141.0 12.8 110 258-367 16-133 (138)
25 3rdl_A Protein kinase C alpha 99.8 4E-18 1.4E-22 142.2 11.2 106 262-368 14-125 (137)
26 2dmg_A KIAA1228 protein; beta- 99.8 2.9E-18 1E-22 144.0 10.2 109 258-367 18-135 (142)
27 1rh8_A Piccolo protein; beta-s 99.8 1.3E-18 4.4E-23 146.1 8.0 105 263-367 17-138 (142)
28 3fbk_A RGS3, RGP3, regulator o 99.8 2.4E-18 8.3E-23 146.5 9.5 112 255-368 18-138 (153)
29 2q3x_A Regulating synaptic mem 99.7 5.8E-18 2E-22 146.9 10.9 106 262-368 28-140 (171)
30 2enp_A B/K protein; C2 type 1, 99.7 3.4E-18 1.2E-22 144.5 9.0 112 256-367 18-141 (147)
31 3n5a_A Synaptotagmin-7; calciu 99.7 1.4E-17 4.9E-22 138.9 11.9 108 257-366 9-123 (138)
32 1tjx_A Similar to synaptotagmi 99.7 2.1E-17 7.1E-22 141.6 13.2 112 256-367 17-147 (159)
33 2cm5_A Rabphilin-3A; protein t 99.7 5.5E-17 1.9E-21 140.0 13.8 107 257-365 30-143 (166)
34 1dqv_A Synaptotagmin III; beta 99.7 3.7E-17 1.3E-21 154.4 13.6 133 255-394 11-150 (296)
35 1w15_A Synaptotagmin IV; metal 99.7 1.8E-17 6.3E-22 141.0 9.5 109 257-367 23-138 (153)
36 2cjt_A UNC-13 homolog A, MUNC1 99.7 6.4E-17 2.2E-21 134.0 10.9 89 262-357 3-92 (131)
37 3nsj_A Perforin-1; pore formin 99.7 1.1E-15 3.8E-20 154.3 21.0 173 196-389 310-502 (540)
38 3l9b_A Otoferlin; C2-domain, b 99.7 2.1E-16 7E-21 129.8 12.4 118 264-395 21-142 (144)
39 3jzy_A Intersectin 2; C2 domai 99.7 1.8E-16 6.1E-21 160.8 14.7 117 261-388 384-505 (510)
40 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.3E-15 4.6E-20 131.2 12.0 90 261-357 11-101 (167)
41 1cjy_A CPLA2, protein (cytosol 99.6 4.3E-16 1.5E-20 162.0 7.2 108 259-367 13-126 (749)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.4E-14 8.1E-19 134.1 13.6 109 259-367 145-272 (284)
43 1djx_A PLC-D1, phosphoinositid 99.6 3.1E-14 1.1E-18 146.7 15.5 120 262-392 495-623 (624)
44 3bxj_A RAS GTPase-activating p 99.5 2.4E-15 8.1E-20 151.1 -0.3 127 261-395 8-159 (483)
45 1dqv_A Synaptotagmin III; beta 99.5 1.6E-14 5.5E-19 136.3 4.2 96 259-354 147-249 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.3 4E-12 1.4E-16 133.0 10.0 105 262-367 170-280 (674)
47 3ohm_B 1-phosphatidylinositol- 99.2 9.7E-11 3.3E-15 123.9 13.3 110 264-392 725-844 (885)
48 3qr0_A Phospholipase C-beta (P 99.2 1.9E-10 6.5E-15 121.0 13.7 112 263-389 649-769 (816)
49 2zkm_X 1-phosphatidylinositol- 99.1 1.9E-10 6.6E-15 121.4 13.1 111 262-388 676-796 (799)
50 1yrk_A NPKC-delta, protein kin 99.1 3.2E-09 1.1E-13 84.5 13.6 111 263-392 5-124 (126)
51 2enj_A NPKC-theta, protein kin 98.9 5.1E-09 1.8E-13 84.5 10.6 112 262-392 8-129 (138)
52 2yrb_A Protein fantom; beta sa 92.0 1.5 5.1E-05 36.2 10.4 121 261-388 15-147 (156)
53 3l4c_A Dedicator of cytokinesi 86.3 16 0.00055 31.8 13.6 56 297-352 77-139 (220)
54 2k1k_A Ephrin type-A receptor 85.9 0.79 2.7E-05 28.2 3.3 25 2-26 11-35 (38)
55 2ks1_B Epidermal growth factor 82.7 0.92 3.2E-05 28.8 2.7 26 4-29 14-39 (44)
56 2wxf_A Phosphatidylinositol-4, 82.5 7.1 0.00024 41.7 11.0 90 263-355 216-326 (940)
57 2l2t_A Receptor tyrosine-prote 78.5 1.4 4.7E-05 28.0 2.4 25 5-29 14-38 (44)
58 3hhm_A Phosphatidylinositol-4, 76.8 14 0.00049 39.9 11.1 91 263-355 354-457 (1091)
59 1e7u_A Phosphatidylinositol 3- 70.3 19 0.00065 38.5 10.1 92 263-355 217-332 (961)
60 2jwa_A Receptor tyrosine-prote 63.0 5.9 0.0002 25.0 2.7 25 4-28 14-38 (44)
61 2y3a_A Phosphatidylinositol-4, 58.1 11 0.00038 40.8 5.6 90 263-355 352-472 (1092)
62 2knc_B Integrin beta-3; transm 52.9 14 0.00049 26.5 3.7 20 3-22 13-33 (79)
63 1q90_G Cytochrome B6F complex 50.1 22 0.00074 21.3 3.5 10 3-12 5-14 (37)
64 1ewf_A BPI, bactericidal/perme 38.0 2.7E+02 0.0092 26.5 15.6 21 162-182 102-122 (456)
65 2l34_A TYRO protein tyrosine k 36.3 40 0.0014 19.8 3.2 23 2-24 7-29 (33)
66 1vf5_G Protein PET G; photosyn 35.6 27 0.00092 20.9 2.3 10 3-12 5-14 (37)
67 2ks1_B Epidermal growth factor 34.8 27 0.00092 22.0 2.4 22 3-24 17-38 (44)
68 2l8s_A Integrin alpha-1; trans 30.1 54 0.0018 21.6 3.3 24 6-29 15-39 (54)
69 2k9j_B Integrin beta-3; transm 30.1 53 0.0018 20.4 3.2 21 5-25 14-35 (43)
70 2knc_A Integrin alpha-IIB; tra 26.7 65 0.0022 21.2 3.3 21 6-26 18-39 (54)
71 2knc_B Integrin beta-3; transm 21.3 1.2E+02 0.004 21.6 4.1 12 2-13 16-28 (79)
No 1
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.3e-21 Score=164.19 Aligned_cols=129 Identities=32% Similarity=0.445 Sum_probs=109.8
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecC---CCCeEEEEEEEcc-
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDK---ETQSLIFEVFDKD- 336 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~---~~~~L~v~v~d~d- 336 (398)
...|.|+|+|++|++|+..+. |.+||||++++.+ .+++|+++++++||.|||+|.|.+..+ ....|.++|||+|
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD-EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS-CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC-EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 357899999999999999998 9999999999997 579999999999999999999999653 4578999999999
Q ss_pred CCCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEeeeeeeccc
Q 015885 337 IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSFNL 396 (398)
Q Consensus 337 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~~~ 396 (398)
.++|++||++.+++.++..+...+.|+++.+-.+ ..+....|+|+++++ |.|..-
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~---~~~~~~~G~l~l~~~--~~p~~~ 136 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLN---EKGQDTGATIDLVIG--YDPPSG 136 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC---TTCCEEEEEEEEEEE--ECCCBS
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccC---CCCCCCCCEEEEEEE--EECCCC
Confidence 8899999999999999988877788887332111 123356799999999 998653
No 2
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.87 E-value=3.2e-21 Score=164.36 Aligned_cols=125 Identities=28% Similarity=0.532 Sum_probs=102.2
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc-----eeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEc
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDK 335 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~ 335 (398)
...|.|+|+|++|++|+.++..|.+||||++++.+ ...++|+++++|+||.|||+|.|.+.+. ...|.++|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEEC
Confidence 57899999999999999999889999999999974 2578999999999999999999999864 57899999999
Q ss_pred c-CCCCceeEEEEEECccccccccc------ceEEecccccccccccCCCcccEEEEEEeeeeee
Q 015885 336 D-IGQDKRLGIVKLPLIDLEADTPK------EAELRLLPSLDMLKIKDKKDRGSITVKVGASKHS 393 (398)
Q Consensus 336 d-~~~d~~lG~~~i~l~~l~~~~~~------~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P 393 (398)
| .++|++||++.++++++..+... ..|++|.+. ....+..|+|+++++ |.|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~i~l~l~--~~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR-----SHKSRVKGYLRLKMT--YLP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS-----STTCCCCSEEEEEEE--ECC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc-----cCCCCcceEEEEEEE--EeC
Confidence 9 88999999999999999876543 489988642 123467899999999 987
No 3
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.87 E-value=1.4e-21 Score=163.23 Aligned_cols=124 Identities=26% Similarity=0.456 Sum_probs=109.4
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccC-CCCCceeccEEEEEeecCCCCeEEEEEEEcc-CC
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVFDKD-IG 338 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d-~~ 338 (398)
.+.|.|+|+|++|++|+..+..|.+||||++++++ .+++|++++ +++||.|||+|.|.+.+ ....|.++|||+| .+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 57899999999999999999889999999999988 478999998 89999999999999987 5679999999999 88
Q ss_pred CCceeEEEEEECccccc-ccccceEEecccccccccccCCCcccEEEEEEeeeeeeccc
Q 015885 339 QDKRLGIVKLPLIDLEA-DTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSFNL 396 (398)
Q Consensus 339 ~d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~~~ 396 (398)
+|++||++.+++.++.. +.....|++|. .+++..|+|+++++ |.|...
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~--------~~~~~~G~i~l~l~--~~p~~~ 133 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVV--------KDEEYKGEIWVALS--FKPSGP 133 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEE--------ETTEEEEEEEEEEE--EEECCS
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEee--------cCCccCEEEEEEEE--EEeCCC
Confidence 99999999999999944 44456788875 23467899999999 999764
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=3.2e-21 Score=160.43 Aligned_cols=125 Identities=27% Similarity=0.420 Sum_probs=108.3
Q ss_pred cccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc-
Q 015885 258 LELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD- 336 (398)
Q Consensus 258 ~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d- 336 (398)
.+..+.|.|+|+|++|++|+.++..|.+||||++++++ .+++|+++++++||.|||+|.|.+.+. ...|.++|||+|
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-DRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDG 84 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-EEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEET
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-EEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCC
Confidence 34578999999999999999999999999999999998 578999999999999999999999874 578999999999
Q ss_pred CCCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEeeeeee
Q 015885 337 IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHS 393 (398)
Q Consensus 337 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P 393 (398)
.++|++||++.+++.++..+. ..|++|... ...+...|+|+++++ |..
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~-----~~~~~~~G~i~l~i~--~~~ 132 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNK-----DLEQAFKGVIYLEMD--LIY 132 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC--CEECCCBCS-----CTTSCCSSEEEEEEE--EEE
T ss_pred CCCCCeeEEEEEEHHHccCCC--ceEEEeecC-----CCCCccceEEEEEEE--EEe
Confidence 888999999999999997643 578888642 123467899999999 753
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=3.8e-21 Score=163.89 Aligned_cols=114 Identities=23% Similarity=0.269 Sum_probs=100.5
Q ss_pred CCCcEEEEEEeeeeecccCcC----------CCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEE
Q 015885 261 KPQGKVAVTIVKANNLKNMEM----------IGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIF 330 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~----------~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v 330 (398)
...|.|+|+|++|++|+++|. .|.+||||++++++....+|+++++|+||.|||+|.|.+.+ .+.|.+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~ 103 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLEL 103 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEE
Confidence 568999999999999998873 26799999999988666799999999999999999999975 368999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccc----cccceEEecccccccccccCCCcccEEEEEEe
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEAD----TPKEAELRLLPSLDMLKIKDKKDRGSITVKVG 388 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~ 388 (398)
+|||+| .++|++||++.++++++..+ ...+.|++|. +.|+|+++++
T Consensus 104 ~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~ 154 (157)
T 2fk9_A 104 AVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVIT 154 (157)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEE
T ss_pred EEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEE
Confidence 999999 89999999999999999865 4567899873 2799999998
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85 E-value=2.3e-20 Score=158.07 Aligned_cols=120 Identities=25% Similarity=0.415 Sum_probs=105.0
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc-C---
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD-I--- 337 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d-~--- 337 (398)
..|.|+|+|++|++|+.+|..|.+||||++++++ .+++|+++++|+||.|||+|.|.+..+ .+.|.++|||+| .
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK-TKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-EEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC-EEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCccc
Confidence 4799999999999999999999999999999987 688999999999999999999999875 478999999999 5
Q ss_pred --------CCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEeeeee
Q 015885 338 --------GQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKH 392 (398)
Q Consensus 338 --------~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~ 392 (398)
++|++||++.++++++. ...+.|++|.+. ......+|+|+++++ |.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~-----~~~~~~~G~i~l~l~--~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKR-----TDKSAVSGAIRLHIS--VE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCS-----STTCCCCCEEEEEEE--EE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccC-----CCCCCCceEEEEEEE--EE
Confidence 79999999999999993 355789998642 233456899999999 75
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=1.1e-20 Score=157.89 Aligned_cols=117 Identities=19% Similarity=0.256 Sum_probs=101.5
Q ss_pred CCcEEEEEEeeeeecccCcCCCC-----------CCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEE
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGK-----------SDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIF 330 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~-----------~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v 330 (398)
..|.|+|+|++|++|+++|..++ +||||++++++....+|+++++|+||.|||+|.|.+.+. +.|.+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 36999999999999999886544 999999999876667999999999999999999999764 78999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccccc--cceEEecccccccccccCCCcccEEEEEEeeeeeec
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEADTP--KEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSF 394 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~~~--~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~ 394 (398)
+|||+| .++|++||++.++++++..+.. .+.|++|. +.|+|+++++ |.+.
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~------------~~G~i~l~l~--~~~~ 134 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE------------PEGKVYVIID--LSGS 134 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB------------SSCEEEEEEE--EEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC------------CCeEEEEEEE--EEec
Confidence 999999 8999999999999999987532 36788663 2799999999 9764
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84 E-value=3.2e-20 Score=161.97 Aligned_cols=126 Identities=27% Similarity=0.510 Sum_probs=101.0
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcce-----eeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEc
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPL-----FKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDK 335 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~-----~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~ 335 (398)
...|.|+|+|++|++|+.++..|.+||||++++.+. .+++|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEEC
Confidence 458999999999999999999999999999999741 46899999999999999999999986 457899999999
Q ss_pred c-CCCCceeEEEEEECccccccccc-c-----eEEecccccccccccCCCcccEEEEEEeeeeeec
Q 015885 336 D-IGQDKRLGIVKLPLIDLEADTPK-E-----AELRLLPSLDMLKIKDKKDRGSITVKVGASKHSF 394 (398)
Q Consensus 336 d-~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~ 394 (398)
| .++|++||++.++|.++..+... + .|+.|... ...++..|+|+++++ |.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~l~l~l~--~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR-----SHKSRVKGYLRLKMT--YLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCS-----STTCCCCSEEEEEEE--ECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc-----CCCCccCEEEEEEEE--EEeC
Confidence 9 88999999999999999876543 2 68888652 234556899999999 9986
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=3.3e-20 Score=152.67 Aligned_cols=116 Identities=22% Similarity=0.432 Sum_probs=100.9
Q ss_pred CcEEEEEEeeeeecccC---cCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEccC
Q 015885 263 QGKVAVTIVKANNLKNM---EMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKDI 337 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~---d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d~ 337 (398)
.|.|+|+|++|++|+.+ +..|.+||||++++++ ..+++|+++++++||.|||+|.|.+.......|.++|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 6679999999999985 367899999999999999999999976667899999999993
Q ss_pred CCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEe
Q 015885 338 GQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVG 388 (398)
Q Consensus 338 ~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~ 388 (398)
.+|++||++.++++++..+.....|++|.+ ...|.|++++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~----------~~~g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGEKKEVPFIFNQ----------VTEMVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTCEEEEEEEETT----------TEEEEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCCcEEEEEEcCC----------CceEEEEEEEE
Confidence 359999999999999998877889998742 34678888776
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.83 E-value=7.9e-20 Score=151.74 Aligned_cols=121 Identities=25% Similarity=0.351 Sum_probs=100.2
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc-eeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc-CCC-
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD-IGQ- 339 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d-~~~- 339 (398)
...|+|+|++|++|+.+|..|.+||||++++.+ ...++|+++++|+||.|||+|.|.+.+. +.|.++|||+| .++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 467999999999999999999999999999975 4678999999999999999999999864 35999999999 665
Q ss_pred --CceeEEEEEECccccc-ccccceEEecccccccccccCCCcccEEEEEEe
Q 015885 340 --DKRLGIVKLPLIDLEA-DTPKEAELRLLPSLDMLKIKDKKDRGSITVKVG 388 (398)
Q Consensus 340 --d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~ 388 (398)
|++||++.++++++.. ......|++|... ........+|+|+++++
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~---~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL---NPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCS---STTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeec---CCCCCCceeEEEEEEEE
Confidence 8999999999999843 3344577877542 11233456899999998
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=1.6e-19 Score=156.89 Aligned_cols=126 Identities=18% Similarity=0.283 Sum_probs=103.8
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc-CCC
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD-IGQ 339 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d-~~~ 339 (398)
...+.|+|+|++|++|++.+..+.+||||++++++ .+++|+++++|+||.|||+|.|.+.. ...|.|+|||+| .++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~ 109 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKS 109 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCC
Confidence 45789999999999999444445699999999998 78999999999999999999999853 679999999999 889
Q ss_pred CceeEEEEEECcccccccc-----cceEEecccccccccccCCCcccEEEEEEeeeeeeccc
Q 015885 340 DKRLGIVKLPLIDLEADTP-----KEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSFNL 396 (398)
Q Consensus 340 d~~lG~~~i~l~~l~~~~~-----~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~~~ 396 (398)
|++||++.+++.++..+.. ...|++|... ..+....|+|.++++ |.++..
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~--~l~~~~ 164 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLD--GLQLES 164 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEE--SEECC-
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEe--eeecch
Confidence 9999999999999875432 2568887642 124457899999999 998754
No 12
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=154.55 Aligned_cols=111 Identities=17% Similarity=0.167 Sum_probs=96.2
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc---e--eeEeccccCCCCCceeccEEEEEeecC--CCCeE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP---L--FKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSL 328 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~---~--~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L 328 (398)
+..|....+.|+|+|++|++|+.+|..|.+||||++++.+ . .++||+++++|+||+|||+|.|.+... ....|
T Consensus 35 sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L 114 (155)
T 2z0u_A 35 ALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTL 114 (155)
T ss_dssp EEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEE
T ss_pred EEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEE
Confidence 3345578899999999999999999999999999999975 2 378999999999999999999998642 24689
Q ss_pred EEEEEEcc-CCCCceeEEEEEECccccc-ccccceEEecc
Q 015885 329 IFEVFDKD-IGQDKRLGIVKLPLIDLEA-DTPKEAELRLL 366 (398)
Q Consensus 329 ~v~v~d~d-~~~d~~lG~~~i~l~~l~~-~~~~~~~~~L~ 366 (398)
.++|||+| .++|++||++.++++++.. +.....|++|.
T Consensus 115 ~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 115 RVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99999999 8999999999999999964 55677899875
No 13
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.78 E-value=7e-19 Score=148.04 Aligned_cols=112 Identities=28% Similarity=0.392 Sum_probs=98.4
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEEE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFE 331 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v~ 331 (398)
+..|....+.|+|+|++|++|+.++..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.|+
T Consensus 26 ~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 105 (143)
T 3f04_A 26 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMA 105 (143)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEE
T ss_pred EEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEE
Confidence 3345578999999999999999999889999999999943 3578999999999999999999988642 35789999
Q ss_pred EEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 332 VFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 332 v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
|||+| .++|++||++.++++++..+...+.|++|.+
T Consensus 106 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 106 VYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred EEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99999 8899999999999999998888889998864
No 14
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=8.7e-19 Score=149.09 Aligned_cols=112 Identities=28% Similarity=0.392 Sum_probs=98.3
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEEE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFE 331 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v~ 331 (398)
+..|.+..+.|+|+|++|++|+..+..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.|+
T Consensus 34 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 113 (152)
T 1rsy_A 34 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMA 113 (152)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEE
T ss_pred EEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEE
Confidence 3345578899999999999999999899999999999953 3578999999999999999999988642 35789999
Q ss_pred EEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 332 VFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 332 v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
|||+| .++|++||++.+++.++..+...+.|++|.+
T Consensus 114 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 114 VYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99999 8899999999999999988777889998864
No 15
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.78 E-value=1.1e-18 Score=145.24 Aligned_cols=107 Identities=20% Similarity=0.306 Sum_probs=93.7
Q ss_pred cCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEE-eecC--CCCeEEEEE
Q 015885 260 LKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELI-AEDK--ETQSLIFEV 332 (398)
Q Consensus 260 ~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~L~v~v 332 (398)
....|.|+|+|++|++|+. +..|.+||||++++.+ ..+++|+++++|+||.|||+|.|. +... ....|.++|
T Consensus 16 ~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 16 SYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred eecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3468999999999999997 7789999999999842 357899999999999999999999 7532 457999999
Q ss_pred EEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 333 FDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 333 ~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
||+| .++|++||++.++++++..+.....|++|.+
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999 8899999999999999988777889999864
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=7.8e-19 Score=147.42 Aligned_cols=111 Identities=28% Similarity=0.414 Sum_probs=97.1
Q ss_pred ccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeec---CCCCeEEEE
Q 015885 257 ELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAED---KETQSLIFE 331 (398)
Q Consensus 257 ~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~---~~~~~L~v~ 331 (398)
..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.. .....|.|+
T Consensus 19 l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 98 (141)
T 2d8k_A 19 VGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQ 98 (141)
T ss_dssp EEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEE
T ss_pred EEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEE
Confidence 335567899999999999999999899999999999953 357899999999999999999998522 235789999
Q ss_pred EEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 332 VFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 332 v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
|||+| .++|++||++.+++.++..+...+.|++|.+
T Consensus 99 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 99 VLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred EEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999 8899999999999999998877889999864
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.1e-18 Score=144.03 Aligned_cols=109 Identities=24% Similarity=0.277 Sum_probs=90.1
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEc----ceeeEeccccCCCCCceeccEEEEEee---cCCCCeE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIK----PLFKVKTNVVDNNLNPVWNQTFELIAE---DKETQSL 328 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~----~~~~~kT~~~~~t~nP~Wne~f~~~v~---~~~~~~L 328 (398)
+..|.+..+.|+|+|++|++|+.++..|.+||||++++. ...+++|+++++|+||.|||+|.|.+. +.....|
T Consensus 10 ~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 89 (129)
T 2bwq_A 10 KLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML 89 (129)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEE
T ss_pred EEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeE
Confidence 334556789999999999999999999999999999993 236789999999999999999999852 2235789
Q ss_pred EEEEEEcc-CCC--CceeEEEEEECcccccccccceEEec
Q 015885 329 IFEVFDKD-IGQ--DKRLGIVKLPLIDLEADTPKEAELRL 365 (398)
Q Consensus 329 ~v~v~d~d-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L 365 (398)
.++|||+| .++ |++||++.++++++.... .+.|++|
T Consensus 90 ~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 90 EITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 99999999 776 999999999999987754 6789876
No 18
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=1.1e-18 Score=146.64 Aligned_cols=112 Identities=30% Similarity=0.517 Sum_probs=97.0
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEE-eecC--CCCeE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELI-AEDK--ETQSL 328 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~L 328 (398)
+..|.++.+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|. +... ....|
T Consensus 21 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 100 (142)
T 2chd_A 21 SLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTL 100 (142)
T ss_dssp EEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEE
T ss_pred EEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEE
Confidence 3345568899999999999999999899999999999975 357899999999999999999998 5432 23689
Q ss_pred EEEEEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 329 IFEVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 329 ~v~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
.|+|||+| .++|++||++.++++++..+.....|+.|.+
T Consensus 101 ~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 101 RISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999999 8899999999999999998888888888753
No 19
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=3.6e-18 Score=142.89 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=93.6
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc---eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP---LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIF 330 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~---~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v 330 (398)
+..|....+.|+|+|++|+ ++|..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|.+
T Consensus 18 sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~ 94 (138)
T 1wfm_A 18 CLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL 94 (138)
T ss_dssp EEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred EEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEE
Confidence 3345567899999999999 467789999999999953 3468999999999999999999998653 2468999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
+|||+| .++|++||++.++|.++..+.....|++|.+
T Consensus 95 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred EEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999999 8999999999999999987677789999865
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=147.36 Aligned_cols=113 Identities=19% Similarity=0.311 Sum_probs=98.3
Q ss_pred cccccCCCcEEEEEEeeeeecccCc-CCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC--CCCeE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNME-MIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSL 328 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d-~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L 328 (398)
+..|.+..|.|+|+|++|++|+.++ ..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|
T Consensus 15 sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L 94 (148)
T 3fdw_A 15 SLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTL 94 (148)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEE
T ss_pred EEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEE
Confidence 3345677999999999999999988 579999999999974 2478999999999999999999998654 24579
Q ss_pred EEEEEEcc-CCCCceeEEEEEECcccccccccceEEecccc
Q 015885 329 IFEVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLPS 368 (398)
Q Consensus 329 ~v~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 368 (398)
.++|||+| .++|++||++.++++++..+.....|++|.+.
T Consensus 95 ~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 95 QFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999 88999999999999999887778899999763
No 21
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=5.2e-18 Score=159.13 Aligned_cols=133 Identities=25% Similarity=0.349 Sum_probs=112.7
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEEE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFE 331 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v~ 331 (398)
+..|....|.|+|+|++|++|+.+|..|.+||||++++.+ ...++|+++++|+||.|||+|.|.+... ....|.++
T Consensus 11 ~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~ 90 (284)
T 2r83_A 11 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMA 90 (284)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEE
T ss_pred EEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEE
Confidence 3345568999999999999999999999999999999974 2478999999999999999999998643 35799999
Q ss_pred EEEcc-CCCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEeeeeeec
Q 015885 332 VFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSF 394 (398)
Q Consensus 332 v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~ 394 (398)
|||+| .++|++||++.+++.++..+...+.|++|.+.. .......|+|.+++. |.|.
T Consensus 91 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~~~~~~~G~i~l~l~--~~p~ 148 (284)
T 2r83_A 91 VYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAE----KEEQEKLGDICFSLR--YVPT 148 (284)
T ss_dssp EEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCS----SCCCCCCCEEEEEEE--EETT
T ss_pred EEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccc----cccccccccEEEEEE--ecCc
Confidence 99999 889999999999999998877778999986531 122346799999999 9874
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=9.5e-19 Score=146.70 Aligned_cols=109 Identities=25% Similarity=0.304 Sum_probs=93.6
Q ss_pred cccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEe-ec--CCCCeEEE
Q 015885 258 LELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIA-ED--KETQSLIF 330 (398)
Q Consensus 258 ~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v-~~--~~~~~L~v 330 (398)
.|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+ .. .....|.|
T Consensus 15 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 94 (141)
T 1v27_A 15 WFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 94 (141)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEE
T ss_pred EEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEE
Confidence 35567899999999999999999999999999999832 3578999999999999999999984 32 23578999
Q ss_pred EEEEcc-CCC--CceeEEEEEECcccccccccceEEeccc
Q 015885 331 EVFDKD-IGQ--DKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 331 ~v~d~d-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
+|||+| .++ |++||++.+++.++.... ...|++|.+
T Consensus 95 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 95 TLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999 766 999999999999987654 678999875
No 23
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=4.4e-18 Score=144.23 Aligned_cols=105 Identities=28% Similarity=0.480 Sum_probs=93.2
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC-CCCeEEEEEEEcc
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK-ETQSLIFEVFDKD 336 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~L~v~v~d~d 336 (398)
..+.|+|+|++|++|+.++..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.|+|||+|
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 4689999999999999999899999999999974 3578999999999999999999998753 2358999999999
Q ss_pred -CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 337 -IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 337 -~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
.++|++||++.+++.++..+ ..+.|++|.+
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 88999999999999999875 4678999865
No 24
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=7e-18 Score=141.02 Aligned_cols=110 Identities=27% Similarity=0.391 Sum_probs=93.6
Q ss_pred cccCCCcEEEEEEeeeeecccCcCC-CCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEE-eecC--CCCeEEEE
Q 015885 258 LELKPQGKVAVTIVKANNLKNMEMI-GKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELI-AEDK--ETQSLIFE 331 (398)
Q Consensus 258 ~~~~~~g~L~V~V~~a~~L~~~d~~-g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~-v~~~--~~~~L~v~ 331 (398)
.|.++.+.|+|+|++|++|+.+|.. |.+||||++++.+ ..+++|+++++|+||.|||+|.|. +... ....|.++
T Consensus 16 ~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~ 95 (138)
T 1ugk_A 16 EYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFT 95 (138)
T ss_dssp EEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEE
Confidence 3556789999999999999999985 8999999999964 367899999999999999999996 5432 34689999
Q ss_pred EEEcc-CCCCceeEEEEEECccccccccc-ceEEeccc
Q 015885 332 VFDKD-IGQDKRLGIVKLPLIDLEADTPK-EAELRLLP 367 (398)
Q Consensus 332 v~d~d-~~~d~~lG~~~i~l~~l~~~~~~-~~~~~L~~ 367 (398)
|||+| .++|++||++.++++++..+... ..|++|.+
T Consensus 96 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 96 ILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 99999 88999999999999999876554 46677754
No 25
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.75 E-value=4e-18 Score=142.16 Aligned_cols=106 Identities=27% Similarity=0.425 Sum_probs=93.5
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEc----ceeeEeccccCCCCCceeccEEEEEeecC-CCCeEEEEEEEcc
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIK----PLFKVKTNVVDNNLNPVWNQTFELIAEDK-ETQSLIFEVFDKD 336 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~----~~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~L~v~v~d~d 336 (398)
..|.|+|+|++|++|+..+..|.+||||++++. ...+++|+++++++||.|||+|.|.+... ....|.++|||+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 479999999999999999999999999999994 23578999999999999999999998653 2357999999999
Q ss_pred -CCCCceeEEEEEECcccccccccceEEecccc
Q 015885 337 -IGQDKRLGIVKLPLIDLEADTPKEAELRLLPS 368 (398)
Q Consensus 337 -~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 368 (398)
.++|++||++.++++++..+. ...|++|.+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 889999999999999997765 7889998753
No 26
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.9e-18 Score=144.00 Aligned_cols=109 Identities=25% Similarity=0.278 Sum_probs=93.4
Q ss_pred cccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEEE
Q 015885 258 LELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFE 331 (398)
Q Consensus 258 ~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v~ 331 (398)
.|.+..+.|+|+|++|++|+.++..| +||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|.|+
T Consensus 18 ~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 96 (142)
T 2dmg_A 18 RHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVA 96 (142)
T ss_dssp EEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEE
Confidence 34567899999999999999999888 99999999953 2568999999999999999999998532 23589999
Q ss_pred EEEcc-CCC--CceeEEEEEECcccccccccceEEeccc
Q 015885 332 VFDKD-IGQ--DKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 332 v~d~d-~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
|||+| .++ |++||++.++++++..+.....|++|.+
T Consensus 97 V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 97 VKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EEECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99999 653 5799999999999987777788999865
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=1.3e-18 Score=146.14 Aligned_cols=105 Identities=29% Similarity=0.357 Sum_probs=93.0
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEEcce-------------eeEeccccCCCCCceeccEEEEE-eec--CCCC
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPL-------------FKVKTNVVDNNLNPVWNQTFELI-AED--KETQ 326 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~-------------~~~kT~~~~~t~nP~Wne~f~~~-v~~--~~~~ 326 (398)
.|.|+|+|++|++|+.+|..|.+||||++++.+. .+++|+++++|+||.|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 7899999999999999999999999999999763 25789999999999999999997 532 2457
Q ss_pred eEEEEEEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 327 SLIFEVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 327 ~L~v~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
.|.++|||+| .++|++||++.++++++..+.....|++|.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 8999999999 8899999999999999988777789999864
No 28
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=2.4e-18 Score=146.52 Aligned_cols=112 Identities=19% Similarity=0.296 Sum_probs=95.3
Q ss_pred ccccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEee--cCCCCeE
Q 015885 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAE--DKETQSL 328 (398)
Q Consensus 255 ~~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~--~~~~~~L 328 (398)
++..|....|.|+|+|++|++|+..+ .|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+. +. ...|
T Consensus 18 lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L 95 (153)
T 3fbk_A 18 LRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDD-QKRL 95 (153)
T ss_dssp EEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGT-TSEE
T ss_pred EEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHh-CCEE
Confidence 34456678999999999999999998 69999999999953 24689999999999999999999983 33 3569
Q ss_pred EEEEEEcc-CCC-CceeEEEEEECccccc-ccccceEEecccc
Q 015885 329 IFEVFDKD-IGQ-DKRLGIVKLPLIDLEA-DTPKEAELRLLPS 368 (398)
Q Consensus 329 ~v~v~d~d-~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 368 (398)
.|+|||+| .++ |++||++.++++++.. +.....|++|.+.
T Consensus 96 ~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 96 LVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp EEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred EEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 99999999 666 9999999999999985 6677899999763
No 29
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=5.8e-18 Score=146.91 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=93.9
Q ss_pred CCcEEEEEEeeeeecccCcC-CCCCCcEEEEEEcce----eeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEE-Ec
Q 015885 262 PQGKVAVTIVKANNLKNMEM-IGKSDPYAVVHIKPL----FKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVF-DK 335 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~-~g~~dpyv~v~~~~~----~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~-d~ 335 (398)
..|.|+|+|++|++|+.+|. .|.+||||++++.+. .+++|+++++|+||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 58999999999999999985 699999999998752 37899999999999999999999865 4678999999 99
Q ss_pred c-CCCCceeEEEEEECcccccccccceEEecccc
Q 015885 336 D-IGQDKRLGIVKLPLIDLEADTPKEAELRLLPS 368 (398)
Q Consensus 336 d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 368 (398)
| .++|++||++.++++++..+.....|++|.+.
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9 88999999999999999877788899999764
No 30
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=3.4e-18 Score=144.50 Aligned_cols=112 Identities=20% Similarity=0.306 Sum_probs=94.2
Q ss_pred cccccCCCcEEEEEEeeeeecccC-cC------CCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecC--C
Q 015885 256 SELELKPQGKVAVTIVKANNLKNM-EM------IGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--E 324 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~-d~------~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~ 324 (398)
+..|.+..+.|+|+|++|++|+.+ +. .|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... .
T Consensus 18 ~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 97 (147)
T 2enp_A 18 STQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQ 97 (147)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhc
Confidence 344567899999999999999984 33 36899999999974 3578999999999999999999988642 2
Q ss_pred CCeEEEEEEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 325 TQSLIFEVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 325 ~~~L~v~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
...|.|+|||+| .++|++||++.+++.++........|+.|.+
T Consensus 98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp HSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred cCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 358999999999 8899999999999999987766678888754
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.74 E-value=1.4e-17 Score=138.89 Aligned_cols=108 Identities=28% Similarity=0.402 Sum_probs=91.1
Q ss_pred ccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecCC--CCeEEE
Q 015885 257 ELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIF 330 (398)
Q Consensus 257 ~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~L~v 330 (398)
..|.+..|.|+|+|++|++|+..+..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.... ...|.+
T Consensus 9 l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~ 88 (138)
T 3n5a_A 9 LCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIII 88 (138)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEE
T ss_pred EEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEE
Confidence 345567899999999999999999999999999999974 24789999999999999999999986532 358999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccccccceEEecc
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLL 366 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 366 (398)
+|||+| .++|++||++.++++++.. ....|+++.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l~ 123 (138)
T 3n5a_A 89 TVMDKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDMI 123 (138)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCHH--HHHHHHHHH
T ss_pred EEEECCCCCCCcEEEEEEEccccCCh--HHHHHHHHH
Confidence 999999 8899999999999997542 345566654
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.74 E-value=2.1e-17 Score=141.59 Aligned_cols=112 Identities=31% Similarity=0.449 Sum_probs=93.4
Q ss_pred cccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC--CCCeEE
Q 015885 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLI 329 (398)
Q Consensus 256 ~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~ 329 (398)
+..|.+..|.|+|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|.
T Consensus 17 ~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~ 96 (159)
T 1tjx_A 17 SLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVV 96 (159)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEE
T ss_pred EEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEE
Confidence 3345578999999999999999999999999999999964 2468999999999999999999998643 245799
Q ss_pred EEEEEcc-CCCCceeEEEEEECcccc------------cccccceEEeccc
Q 015885 330 FEVFDKD-IGQDKRLGIVKLPLIDLE------------ADTPKEAELRLLP 367 (398)
Q Consensus 330 v~v~d~d-~~~d~~lG~~~i~l~~l~------------~~~~~~~~~~L~~ 367 (398)
|+|||+| .++|++||++.+++..+. .+.....|+.|.+
T Consensus 97 i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 97 VTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999999 889999999999998642 2234567888765
No 33
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=5.5e-17 Score=140.01 Aligned_cols=107 Identities=25% Similarity=0.321 Sum_probs=90.4
Q ss_pred ccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC--CCCeEEE
Q 015885 257 ELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIF 330 (398)
Q Consensus 257 ~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v 330 (398)
..|.++.+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|.|
T Consensus 30 l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 109 (166)
T 2cm5_A 30 LMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI 109 (166)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred EEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEE
Confidence 335567999999999999999999999999999999975 3578999999999999999999998643 2468999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccccccceEEec
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRL 365 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 365 (398)
+|||+| .++|++||++.+++.++.. ....|+++
T Consensus 110 ~V~d~d~~~~~~~iG~~~i~l~~~~~--~~~~W~~l 143 (166)
T 2cm5_A 110 SVWDYDIGKSNDYIGGCQLGISAKGE--RLKHWYEC 143 (166)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCCHH--HHHHHHHH
T ss_pred EEEECCCCCCCcEEEeEEEecccCCc--hhHHHHHH
Confidence 999999 8899999999999998632 23345444
No 34
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.72 E-value=3.7e-17 Score=154.37 Aligned_cols=133 Identities=26% Similarity=0.341 Sum_probs=107.5
Q ss_pred ccccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEc--ceeeEeccccCCCCCceeccEEEEEeecCC--CCeEEE
Q 015885 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIK--PLFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIF 330 (398)
Q Consensus 255 ~~~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~--~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~L~v 330 (398)
++..|....+.|+|+|++|++|+.+|..|.+||||++++. +..+++|+++++|+||.|||+|.|.+...+ ...|+|
T Consensus 11 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 90 (296)
T 1dqv_A 11 FALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 90 (296)
T ss_dssp EEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred EEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence 3444567889999999999999999999999999999994 236789999999999999999999986432 458999
Q ss_pred EEEEcc-CCCCceeEEEEEE-Cccccc-ccccceEEecccccccccccCCCcccEEEEEEeeeeeec
Q 015885 331 EVFDKD-IGQDKRLGIVKLP-LIDLEA-DTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSF 394 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~-l~~l~~-~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~ 394 (398)
+|||+| .++|++||++.++ +.++.. ......|++|... .......|+|.++++ |.|.
T Consensus 91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~i~vsl~--y~~~ 150 (296)
T 1dqv_A 91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG-----GSEKADLGELNFSLC--YLPT 150 (296)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC-----SSCCSCCCEEEEEEE--EETT
T ss_pred EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccc-----cccccccceEEEEEE--eccc
Confidence 999999 8999999999996 555543 3345678887642 133456799999999 9874
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=1.8e-17 Score=140.97 Aligned_cols=109 Identities=22% Similarity=0.236 Sum_probs=85.9
Q ss_pred ccccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc--e--eeEeccccCCCCCceeccEEEEEeecCC--CCeEEE
Q 015885 257 ELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--L--FKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIF 330 (398)
Q Consensus 257 ~~~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~--~--~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~L~v 330 (398)
..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ . .+++|+++++|+||.|||+|.|.+.... ...|.|
T Consensus 23 l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v 102 (153)
T 1w15_A 23 LCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 102 (153)
T ss_dssp EEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred EEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEE
Confidence 345567899999999999999999889999999999953 2 2679999999999999999999987542 367999
Q ss_pred EEEEcc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 331 EVFDKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 331 ~v~d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
+|||+| .++|++||++.+++++ .+.....|++|..
T Consensus 103 ~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 103 LVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp EEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred EEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 999999 8899999999999988 3334556776643
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.70 E-value=6.4e-17 Score=133.97 Aligned_cols=89 Identities=22% Similarity=0.317 Sum_probs=74.4
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccC-CCCCceeccEEEEEeecCCCCeEEEEEEEccCCCC
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVFDKDIGQD 340 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d~~~d 340 (398)
..+.|+|+|++|+++.. .|.+||||+++ . +..+|++++ +|+||.|||+|.|.+.+. ...|.++|||+|.++|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V--QNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKGLIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECCSSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e--cCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECCCCCC
Confidence 46899999999998853 57899999999 3 234555554 699999999999999864 5589999999997789
Q ss_pred ceeEEEEEECccccccc
Q 015885 341 KRLGIVKLPLIDLEADT 357 (398)
Q Consensus 341 ~~lG~~~i~l~~l~~~~ 357 (398)
++||++.++++++....
T Consensus 76 d~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEEEGGGSCBCS
T ss_pred CeEEEEEEEHHHhhhcC
Confidence 99999999999987543
No 37
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.69 E-value=1.1e-15 Score=154.34 Aligned_cols=173 Identities=21% Similarity=0.273 Sum_probs=126.5
Q ss_pred EeecCCcceEEEEEeecCcCccccccHHHHHHHHHHHHHhhhcCC-----C--CeeeeecCCCC---------cCccc-c
Q 015885 196 ALLSEPKPRIDYTLKAVGGSLTAIPGIADMIDDTVDSIITDMLQW-----P--HRIVVPIGGIP---------VDTSE-L 258 (398)
Q Consensus 196 sf~~~P~p~id~~~~~~g~~~~~iP~l~~~i~~~i~~~i~~~~v~-----P--~~~~ipl~~~~---------~d~~~-~ 258 (398)
|+..-|. -|++++.++..-+..-+--..-++..+.+++.+.-.+ | |-. .++.+.. .-... .
T Consensus 310 Sv~~~P~-~I~~~l~PI~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~l~g~~C~C~C~~~~~t~~~~C 387 (540)
T 3nsj_A 310 SLPSNPG-LVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HKSSHDSCQCECQDSKVTNQDCC 387 (540)
T ss_dssp HTTTSCE-EEEEEEEEGGGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EECSSCTTCEEESCTTTBCGGGC
T ss_pred HHhhCCc-eEEEEEEEHHHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-ccCCCCceEeeCCCCCCcccccc
Confidence 3334453 5899999886434333556677888888888877665 3 111 2232210 00111 1
Q ss_pred cc-CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEee-cCCCCeEEEEEEEcc
Q 015885 259 EL-KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAE-DKETQSLIFEVFDKD 336 (398)
Q Consensus 259 ~~-~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~-~~~~~~L~v~v~d~d 336 (398)
.. ...|.|+|+|++|++|+. |..|++||||++++++ .++||+++++|+||+|||+|.|.+. ....+.|+|+|||+|
T Consensus 388 ~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~-~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D 465 (540)
T 3nsj_A 388 PRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG-QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 465 (540)
T ss_dssp BSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT-EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECC
T ss_pred cccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC-EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECC
Confidence 11 347899999999999998 9999999999999997 5699999999999999999999864 345778999999999
Q ss_pred -CCCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEee
Q 015885 337 -IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGA 389 (398)
Q Consensus 337 -~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~ 389 (398)
.++||+||++.++|.. +..+.|+.+ +.|.|++++.+
T Consensus 466 ~~~~dD~LG~~~~~L~~----g~~~~~~~l-------------~~G~l~~~~~~ 502 (540)
T 3nsj_A 466 YGWDDDLLGSCDRSPHS----GFHEVTCEL-------------NHGRVKFSYHA 502 (540)
T ss_dssp SSSCCEEEEEEEECCCS----EEEEEEEEC-------------SSSEEEEEEEE
T ss_pred CCCCCCEEEEEEEEeeC----CcEEEEEEc-------------CCeEEEEEEEE
Confidence 8899999999999883 234566653 25888888775
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.69 E-value=2.1e-16 Score=129.78 Aligned_cols=118 Identities=15% Similarity=0.254 Sum_probs=100.1
Q ss_pred cEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccC-CCCCceeccEEEEEeecC--CCCeEEEEEEEcc-CCC
Q 015885 264 GKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDK--ETQSLIFEVFDKD-IGQ 339 (398)
Q Consensus 264 g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~--~~~~L~v~v~d~d-~~~ 339 (398)
=-|+|+|.+|.+|+ |++|||+++.+++ .+++|++++ ++.||.|||.|++++..+ .+..|.+.|||++ +++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg-~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~ 94 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRG-QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFS 94 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETT-EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSC
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEec-cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccC
Confidence 36899999999998 6899999999987 789999998 799999999999999543 4678999999999 999
Q ss_pred CceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEeeeeeecc
Q 015885 340 DKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKHSFN 395 (398)
Q Consensus 340 d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~P~~ 395 (398)
+++||++.++|.++..++....+..|... .+....++|.++++ |.|.+
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~------n~~~~~a~I~l~l~--Y~pp~ 142 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRVEVSDTLIDD------NNAIIKTSLSMEVR--YQAAD 142 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEEEEEEEEECT------TSCEEEEEEEEEEE--EEETT
T ss_pred CCEEEEEEEEhHHhccCCeEEEeecccCC------CCCccccEEEEEEE--ecCCC
Confidence 99999999999999988766666666542 33334589999999 99954
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.69 E-value=1.8e-16 Score=160.83 Aligned_cols=117 Identities=25% Similarity=0.473 Sum_probs=102.3
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc-CCC
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD-IGQ 339 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d-~~~ 339 (398)
...|.|+|+|++|++|+.+|..|.+||||++++++ .+++|+++++|+||.|||+|.|.+.+.....|+++|||+| .++
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~-~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGS-QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECC-eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 46789999999999999999999999999999987 6899999999999999999999998777788999999999 899
Q ss_pred CceeEEEEEECcccccccc----cceEEecccccccccccCCCcccEEEEEEe
Q 015885 340 DKRLGIVKLPLIDLEADTP----KEAELRLLPSLDMLKIKDKKDRGSITVKVG 388 (398)
Q Consensus 340 d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~ 388 (398)
|++||++.++++++..+.. ...|+.+. +...|+|++++.
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~ 505 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFD 505 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEE
Confidence 9999999999999987544 45677653 235799998888
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=1.3e-15 Score=131.19 Aligned_cols=90 Identities=21% Similarity=0.295 Sum_probs=75.6
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccC-CCCCceeccEEEEEeecCCCCeEEEEEEEccCCC
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVFDKDIGQ 339 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~-~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d~~~ 339 (398)
...+.|+|+|++|+++. ..|.+||||+++ . +..+|++++ ++.||.|||+|.|.+.+. ...|.++|||+|.++
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d~~~ 83 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V--QNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKGLIW 83 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECCSSC
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e--cceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECCCCC
Confidence 34789999999999884 257899999999 3 345666665 699999999999999864 558999999999778
Q ss_pred CceeEEEEEECccccccc
Q 015885 340 DKRLGIVKLPLIDLEADT 357 (398)
Q Consensus 340 d~~lG~~~i~l~~l~~~~ 357 (398)
|++||++.++|+++....
T Consensus 84 dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp CEEEEEEEEEGGGSCBCS
T ss_pred CceEEEEEEEHHHhcccC
Confidence 999999999999986543
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.61 E-value=4.3e-16 Score=162.05 Aligned_cols=108 Identities=25% Similarity=0.480 Sum_probs=97.8
Q ss_pred ccCCCcEEEEEEeeeeeccc---CcCCCCCCcEEEEEEcc--eeeEeccccCCCCCceeccEEEEEeecCCCCeEEEEEE
Q 015885 259 ELKPQGKVAVTIVKANNLKN---MEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVF 333 (398)
Q Consensus 259 ~~~~~g~L~V~V~~a~~L~~---~d~~g~~dpyv~v~~~~--~~~~kT~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~ 333 (398)
...+.|.|+|+|++|++|+. +|..|++||||++++.+ ..++||+++++|+||+|||+|.|.+.....+.|+++||
T Consensus 13 e~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~ 92 (749)
T 1cjy_A 13 EHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM 92 (749)
T ss_dssp CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEE
T ss_pred cCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEE
Confidence 34678999999999999998 88889999999999984 35789999999999999999999998766789999999
Q ss_pred Ecc-CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 334 DKD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 334 d~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
|+| .+ |++||++.+++.++..+.....|++|.+
T Consensus 93 D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 93 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp ECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred ECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 999 77 9999999999999988877889999865
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.56 E-value=2.4e-14 Score=134.11 Aligned_cols=109 Identities=32% Similarity=0.476 Sum_probs=90.9
Q ss_pred ccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecCC--CCeEEEEE
Q 015885 259 ELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIFEV 332 (398)
Q Consensus 259 ~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~L~v~v 332 (398)
+.+..+.|+|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+.... ...|.|+|
T Consensus 145 ~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 145 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 3467899999999999999999999999999999853 14679999999999999999999986542 34799999
Q ss_pred EEcc-CCCCceeEEEEEECccccc------------ccccceEEeccc
Q 015885 333 FDKD-IGQDKRLGIVKLPLIDLEA------------DTPKEAELRLLP 367 (398)
Q Consensus 333 ~d~d-~~~d~~lG~~~i~l~~l~~------------~~~~~~~~~L~~ 367 (398)
||+| .++|++||++.++++.+.. +.....|+.|.+
T Consensus 225 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 225 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 9999 8999999999999987422 233457888765
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.56 E-value=3.1e-14 Score=146.73 Aligned_cols=120 Identities=23% Similarity=0.358 Sum_probs=99.7
Q ss_pred CCcEEEEEEeeeeecccCcC--CCCCCcEEEEEEcc----eeeEeccccCCC-CCceeccEEEEEeecCCCCeEEEEEEE
Q 015885 262 PQGKVAVTIVKANNLKNMEM--IGKSDPYAVVHIKP----LFKVKTNVVDNN-LNPVWNQTFELIAEDKETQSLIFEVFD 334 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~--~g~~dpyv~v~~~~----~~~~kT~~~~~t-~nP~Wne~f~~~v~~~~~~~L~v~v~d 334 (398)
..+.|+|+|++|++|+..+. .|.+||||++++.+ ..++||++++++ +||.|||+|.|.+..++...|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999998874 68999999999954 257899999987 999999999999987666789999999
Q ss_pred cc-CCCCceeEEEEEECcccccccccceEEecccccccccccCCC-cccEEEEEEeeeee
Q 015885 335 KD-IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKK-DRGSITVKVGASKH 392 (398)
Q Consensus 335 ~d-~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~-~~G~I~l~l~~~y~ 392 (398)
+| .++|++||++.+++.++..+. .|++|... .+.. ..|+|.+.++ |.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L~v~i~--~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATLFVKIS--IQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEEEEEEE--EE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEEEEEEE--EE
Confidence 99 889999999999999997653 47777531 2122 3588888888 64
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.48 E-value=2.4e-15 Score=151.13 Aligned_cols=127 Identities=14% Similarity=0.213 Sum_probs=22.8
Q ss_pred CCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcceeeEeccccCCC---CCceeccEEEEEeecCCCCeEEEEEEEc-c
Q 015885 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNN---LNPVWNQTFELIAEDKETQSLIFEVFDK-D 336 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~~~kT~~~~~t---~nP~Wne~f~~~v~~~~~~~L~v~v~d~-d 336 (398)
+..|.|+|+|++|++|+++| ||||++++++....||+++++| +||.|||+|.|.+... ...|.++|||+ |
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d 81 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSD 81 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC------------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCC
Confidence 45789999999999999876 9999999987557799999999 9999999999987543 57899999994 3
Q ss_pred ----CCCCceeEEEEEECcccccccccceEEecccccccc-----------------cccCCCcccEEEEEEeeeeeecc
Q 015885 337 ----IGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDML-----------------KIKDKKDRGSITVKVGASKHSFN 395 (398)
Q Consensus 337 ----~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~-----------------~~~~~~~~G~I~l~l~~~y~P~~ 395 (398)
.++|++||++.++++++..+...+.|++|....... ..++....|.|++++. |.+..
T Consensus 82 ~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~--~~~~~ 159 (483)
T 3bxj_A 82 KKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKAR--YQTMS 159 (483)
T ss_dssp -------------------------CCEECC--------------------------------------CEEE--EEECC
T ss_pred ccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEE--eeeee
Confidence 578999999999999999877788999985432100 0012234699999999 97754
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.47 E-value=1.6e-14 Score=136.26 Aligned_cols=96 Identities=33% Similarity=0.520 Sum_probs=84.3
Q ss_pred ccCCCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecCC--CCeEEEEE
Q 015885 259 ELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIFEV 332 (398)
Q Consensus 259 ~~~~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~~--~~~L~v~v 332 (398)
+.+..|.|+|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.... ...|.|+|
T Consensus 147 y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 226 (296)
T 1dqv_A 147 YLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAV 226 (296)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEE
T ss_pred eccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEE
Confidence 4467899999999999999999999999999999862 24689999999999999999999886532 45799999
Q ss_pred EEcc-CCCCceeEEEEEECcccc
Q 015885 333 FDKD-IGQDKRLGIVKLPLIDLE 354 (398)
Q Consensus 333 ~d~d-~~~d~~lG~~~i~l~~l~ 354 (398)
||+| .++|++||.+.++++++.
T Consensus 227 ~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 227 VDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp EECCSSSCCEEEEECCCSSCTTC
T ss_pred EeCCCCCCCceEEEEEECCccCC
Confidence 9999 899999999999998864
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.30 E-value=4e-12 Score=133.04 Aligned_cols=105 Identities=28% Similarity=0.490 Sum_probs=91.4
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc----eeeEeccccCCCCCceeccEEEEEeecC-CCCeEEEEEEEcc
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK-ETQSLIFEVFDKD 336 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~~~v~~~-~~~~L~v~v~d~d 336 (398)
..+.|+|+|.+|++|..+|..|.+||||++++.+ ..+++|+++++|+||.|||+|.|.+... ....|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 4789999999999999999999999999999943 2468999999999999999999998643 3456999999999
Q ss_pred -CCCCceeEEEEEECcccccccccceEEeccc
Q 015885 337 -IGQDKRLGIVKLPLIDLEADTPKEAELRLLP 367 (398)
Q Consensus 337 -~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 367 (398)
.++|++||.+.++++++.... .+.|+.+..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 999999999999999997654 477888764
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.19 E-value=9.7e-11 Score=123.86 Aligned_cols=110 Identities=18% Similarity=0.267 Sum_probs=87.2
Q ss_pred cEEEEEEeeeeecccCcCCCCCCcEEEEEEcc-----eeeEeccccCC-CCCceecc-EEEEE-eecCCCCeEEEEEEEc
Q 015885 264 GKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTNVVDN-NLNPVWNQ-TFELI-AEDKETQSLIFEVFDK 335 (398)
Q Consensus 264 g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~kT~~~~~-t~nP~Wne-~f~~~-v~~~~~~~L~v~v~d~ 335 (398)
..|+|+|++|++|+.. .+||||++.+.+ ..+++|+++++ ++||+||| +|.|. +..++...|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4799999999999853 689999999964 13579999876 59999999 69998 7666667899999998
Q ss_pred cCCCCceeEEEEEECcccccccccceEEecccccccccccCCC--cccEEEEEEeeeee
Q 015885 336 DIGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKK--DRGSITVKVGASKH 392 (398)
Q Consensus 336 d~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~--~~G~I~l~l~~~y~ 392 (398)
| |+++|++.++|+.+..+- ..++|.. ..+. ..|+|.+.+. |.
T Consensus 801 d---ddfiG~~~lpL~~L~~Gy---R~vpL~~-------~~g~~l~~atLfv~i~--~~ 844 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSGY---HYVCLRN-------EANQPLCLPALLIYTE--AS 844 (885)
T ss_dssp T---TEEEEEEEEETTTCCCEE---EEEEEEC-------TTSCEEEEEEEEEEEE--EE
T ss_pred C---ccEEeeEEEEHHHcCCCc---eEEEecC-------CCCCccCceEEEEEEE--EE
Confidence 7 899999999999998652 2455543 2222 4689999999 55
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=1.9e-10 Score=120.99 Aligned_cols=112 Identities=19% Similarity=0.298 Sum_probs=86.8
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEEcce------eeEeccccCC-CCCceeccE-EEEE-eecCCCCeEEEEEE
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPL------FKVKTNVVDN-NLNPVWNQT-FELI-AEDKETQSLIFEVF 333 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~------~~~kT~~~~~-t~nP~Wne~-f~~~-v~~~~~~~L~v~v~ 333 (398)
.+.|+|+|++|++|+.+ .+||||++.+.+. .++||+++++ ++||.|||+ |.|. +..++...|+++||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999753 6899999998641 4679999875 699999998 9998 76666678999999
Q ss_pred EccCCCCceeEEEEEECcccccccccceEEecccccccccccCCCcccEEEEEEee
Q 015885 334 DKDIGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDKKDRGSITVKVGA 389 (398)
Q Consensus 334 d~d~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~ 389 (398)
|++ |+++|++.++|+.+..+- ..++|... ....-..++|.+.+.+
T Consensus 725 D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~-----~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPGY---RHVPLRNE-----SNRPLGLASVFAHIVA 769 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCcc---eEEEEeCC-----CCCCCCceEEEEEEEE
Confidence 985 899999999999998753 24555431 1111234788888883
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.15 E-value=1.9e-10 Score=121.42 Aligned_cols=111 Identities=20% Similarity=0.288 Sum_probs=86.4
Q ss_pred CCcEEEEEEeeeeecccCcCCCCCCcEEEEEEcc-----eeeEecc-ccC-CCCCceecc-EEEE-EeecCCCCeEEEEE
Q 015885 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTN-VVD-NNLNPVWNQ-TFEL-IAEDKETQSLIFEV 332 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~-----~~~~kT~-~~~-~t~nP~Wne-~f~~-~v~~~~~~~L~v~v 332 (398)
..|.|+|+|++|++|+. +.+||||++.+.+ ..++||+ +++ +++||+||| +|.| .+..++...|++.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36789999999999985 4689999999943 1357999 776 469999999 6999 88766667899999
Q ss_pred EEccCCCCceeEEEEEECcccccccccceEEecccccccccccCC-CcccEEEEEEe
Q 015885 333 FDKDIGQDKRLGIVKLPLIDLEADTPKEAELRLLPSLDMLKIKDK-KDRGSITVKVG 388 (398)
Q Consensus 333 ~d~d~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~~-~~~G~I~l~l~ 388 (398)
||+| ++++|++.++++++..+- .+++|... .+. -..++|.+.+.
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~------~g~~~~~~~Lfv~i~ 796 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSGY---HHLCLHSE------SNMPLTMPALFIFLE 796 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCEE---EEEEEECT------TCCEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCCc---EEEeccCC------CCCCCCceEEEEEEE
Confidence 9986 899999999999997652 35666431 112 23578888777
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.07 E-value=3.2e-09 Score=84.53 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=83.9
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEEccee---eEec-cccCCCCCceeccEEEEEeecCCCCeEEEEEEEccCC
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLF---KVKT-NVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKDIG 338 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~kT-~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d~~ 338 (398)
.+.|+|...++.--.-+......||||.+.++... +.+| ..+++|.+|.|||+|.-.+.+ ...|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 56788888666532211222468999999997532 2355 778889999999999998885 5799999996545
Q ss_pred CCceeEEEEEECcccccc-----cccceEEecccccccccccCCCcccEEEEEEeeeee
Q 015885 339 QDKRLGIVKLPLIDLEAD-----TPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKH 392 (398)
Q Consensus 339 ~d~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~ 392 (398)
++++.|+++++++... +..+.|+.|. +.|+|++.+. |+
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe------------P~Gkl~~~i~--~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ------------PQAKVLMSVQ--YF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB------------SSCEEEEEEE--EE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecc------------cCcEEEEEEE--Ee
Confidence 9999999999999843 3457898874 4799999999 76
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.95 E-value=5.1e-09 Score=84.46 Aligned_cols=112 Identities=14% Similarity=0.179 Sum_probs=84.9
Q ss_pred CCcEEEEEEeeeeecccCc-CCCCCCcEEEEEEccee---eEec-cccCCCCCceeccEEEEEeecCCCCeEEEEEEEcc
Q 015885 262 PQGKVAVTIVKANNLKNME-MIGKSDPYAVVHIKPLF---KVKT-NVVDNNLNPVWNQTFELIAEDKETQSLIFEVFDKD 336 (398)
Q Consensus 262 ~~g~L~V~V~~a~~L~~~d-~~g~~dpyv~v~~~~~~---~~kT-~~~~~t~nP~Wne~f~~~v~~~~~~~L~v~v~d~d 336 (398)
..+.|+|...++.--+-+. .....||||.+.++... ..+| ..++.|.+|+|||+|.-.+.+ ...|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3567888887766433221 12358999999997532 3677 677889999999999988875 579999999543
Q ss_pred CCCCceeEEEEEECcccccc-----cccceEEecccccccccccCCCcccEEEEEEeeeee
Q 015885 337 IGQDKRLGIVKLPLIDLEAD-----TPKEAELRLLPSLDMLKIKDKKDRGSITVKVGASKH 392 (398)
Q Consensus 337 ~~~d~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~~~~~~~~~~~G~I~l~l~~~y~ 392 (398)
. +|+..|++++++|... +..+.|+.|. +.|+|++.+. |+
T Consensus 86 ~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe------------P~Gkl~v~i~--~~ 129 (138)
T 2enj_A 86 V---DLISETTVELYSLAERCRKNNGKTEIWLELK------------PQGRMLMNAR--YF 129 (138)
T ss_dssp C---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB------------SSCEEEEEEE--EC
T ss_pred C---CeeeEEEEEHHHHHhhhccCCCceEEEEecc------------cCcEEEEEEE--EE
Confidence 4 8999999999999843 3457898874 3799999998 74
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.03 E-value=1.5 Score=36.16 Aligned_cols=121 Identities=14% Similarity=0.204 Sum_probs=80.9
Q ss_pred CCCcEEEEEEeeeeecccC-cCCCCCCcEEEEEEc--ceeeEeccccCCCCCceeccEEEEEeecC-------CCCeEEE
Q 015885 261 KPQGKVAVTIVKANNLKNM-EMIGKSDPYAVVHIK--PLFKVKTNVVDNNLNPVWNQTFELIAEDK-------ETQSLIF 330 (398)
Q Consensus 261 ~~~g~L~V~V~~a~~L~~~-d~~g~~dpyv~v~~~--~~~~~kT~~~~~t~nP~Wne~f~~~v~~~-------~~~~L~v 330 (398)
+..+.+.++|.++.--+.. ...+..+|+.-+.+. .-+.+.|.+.. +.+|.+|.+-.+.+.-. .+..+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 5678999999988732211 112445777666664 33456777665 88999998887777321 2347889
Q ss_pred EEEEccCCCCceeEEEEEECccccccccc-ceEEecccccccccccCC-CcccEEEEEEe
Q 015885 331 EVFDKDIGQDKRLGIVKLPLIDLEADTPK-EAELRLLPSLDMLKIKDK-KDRGSITVKVG 388 (398)
Q Consensus 331 ~v~d~d~~~d~~lG~~~i~l~~l~~~~~~-~~~~~L~~~~~~~~~~~~-~~~G~I~l~l~ 388 (398)
+++.........+|++.+++.++.....+ .....|.. ..++ ..-|+|.+.++
T Consensus 94 ELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g------~~g~~~~~G~LeywiR 147 (156)
T 2yrb_A 94 EVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIG------TKGDIPNFGTVEYWFR 147 (156)
T ss_dssp EEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECB------SSSCCTTSEEEEEEEE
T ss_pred EEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEc------CCCCcceEEEEEEEEE
Confidence 99887655567999999999999866543 23444432 1222 46799998888
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=86.28 E-value=16 Score=31.77 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=42.3
Q ss_pred eeEeccccCCCCCceeccEEEEEeecC--CCCeEEEEEEEcc--CCC---CceeEEEEEECcc
Q 015885 297 FKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFEVFDKD--IGQ---DKRLGIVKLPLID 352 (398)
Q Consensus 297 ~~~kT~~~~~t~nP~Wne~f~~~v~~~--~~~~L~v~v~d~d--~~~---d~~lG~~~i~l~~ 352 (398)
..++|.+...+.+|.|+|++.+.+... ...-|.|+++... .++ +...|.+.+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 457888889999999999999888643 3446788888755 222 2478999999864
No 54
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=85.91 E-value=0.79 Score=28.18 Aligned_cols=25 Identities=32% Similarity=0.555 Sum_probs=17.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhh
Q 015885 2 GLISGVFMGMIFGIALMAGWRHMMR 26 (398)
Q Consensus 2 ~~~~g~~~g~~~~l~l~~~~~~~~~ 26 (398)
|-++|.++|.+.+++++.+..++++
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHHHHHHHHHHHHe
Confidence 3477888888888887776555443
No 55
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=82.73 E-value=0.92 Score=28.82 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcc
Q 015885 4 ISGVFMGMIFGIALMAGWRHMMRYRS 29 (398)
Q Consensus 4 ~~g~~~g~~~~l~l~~~~~~~~~~~~ 29 (398)
..|.+-|++...++...|..++++|+
T Consensus 14 A~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 14 ATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 34566666655555555555554443
No 56
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=82.48 E-value=7.1 Score=41.72 Aligned_cols=90 Identities=16% Similarity=0.245 Sum_probs=61.3
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEE--cce---eeEeccccCCCCCceeccEEEEEee--c-CCCCeEEEEEEE
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPL---FKVKTNVVDNNLNPVWNQTFELIAE--D-KETQSLIFEVFD 334 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~--~~~---~~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~L~v~v~d 334 (398)
...++|+|.++.++... ..++-||.+.+ |+. ....|+.+.-..+|.|||...|.+. + |....|.+++|+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 56899999999988643 34677877765 331 1234554555678999999888773 2 456789999999
Q ss_pred cc-C--C----------CCceeEEEEEECccccc
Q 015885 335 KD-I--G----------QDKRLGIVKLPLIDLEA 355 (398)
Q Consensus 335 ~d-~--~----------~d~~lG~~~i~l~~l~~ 355 (398)
.. . + .+..+|.+.+++-+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~ 326 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYKD 326 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTTS
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCcC
Confidence 64 2 2 24589999999977543
No 57
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=78.45 E-value=1.4 Score=27.98 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=12.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc
Q 015885 5 SGVFMGMIFGIALMAGWRHMMRYRS 29 (398)
Q Consensus 5 ~g~~~g~~~~l~l~~~~~~~~~~~~ 29 (398)
.|.+-|++..+++...+..++++|+
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EeehHHHHHHHHHHHHHHHHhhhhh
Confidence 3444455554444445555544444
No 58
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=76.82 E-value=14 Score=39.93 Aligned_cols=91 Identities=18% Similarity=0.155 Sum_probs=60.5
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEE--cce---eeEeccccCCCCCceeccEEEEEee--c-CCCCeEEEEEEE
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPL---FKVKTNVVDNNLNPVWNQTFELIAE--D-KETQSLIFEVFD 334 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~--~~~---~~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~L~v~v~d 334 (398)
...++|+|.++.++.... ....+-||.+.+ |+. ...+|+.+. ..+|.|||...|.+. + |....|.+++|+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 568899999998875322 234677888876 321 123444333 467889999888773 2 456789999998
Q ss_pred cc-C----CCCceeEEEEEECccccc
Q 015885 335 KD-I----GQDKRLGIVKLPLIDLEA 355 (398)
Q Consensus 335 ~d-~----~~d~~lG~~~i~l~~l~~ 355 (398)
.. . ..+..+|-+.+++-+...
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTTC
T ss_pred ecCccCcccccceeEEeeeeeEccCC
Confidence 66 2 234579999999987643
No 59
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=70.34 E-value=19 Score=38.55 Aligned_cols=92 Identities=17% Similarity=0.139 Sum_probs=57.9
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEE--ccee--eEeccccCCCCCceeccEEEEEee--c-CCCCeEEEEEEEc
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPLF--KVKTNVVDNNLNPVWNQTFELIAE--D-KETQSLIFEVFDK 335 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~--~~~~--~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~L~v~v~d~ 335 (398)
...++|+|.++......+ ...++-||.+.+ |+.. ..+|+.+.-+.+|.|||...|.+. + |....|.+++|+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 457888888876422111 134567777654 4321 234544445678999998888763 2 4567899999985
Q ss_pred c-CC----------------CCceeEEEEEECccccc
Q 015885 336 D-IG----------------QDKRLGIVKLPLIDLEA 355 (398)
Q Consensus 336 d-~~----------------~d~~lG~~~i~l~~l~~ 355 (398)
. .+ ++..+|-+.+++-+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTTS
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 4 21 34579999999977654
No 60
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=63.03 E-value=5.9 Score=25.03 Aligned_cols=25 Identities=16% Similarity=0.359 Sum_probs=11.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhc
Q 015885 4 ISGVFMGMIFGIALMAGWRHMMRYR 28 (398)
Q Consensus 4 ~~g~~~g~~~~l~l~~~~~~~~~~~ 28 (398)
++|-+.|+++.+.+...+..++++|
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheehh
Confidence 4455566443333333444444333
No 61
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=58.07 E-value=11 Score=40.84 Aligned_cols=90 Identities=17% Similarity=0.258 Sum_probs=58.9
Q ss_pred CcEEEEEEeeeeecccCcCCCCCCcEEEEEE--ccee---eEeccccCCCCCceeccEEEEEee--c-CCCCeEEEEEEE
Q 015885 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPLF---KVKTNVVDNNLNPVWNQTFELIAE--D-KETQSLIFEVFD 334 (398)
Q Consensus 263 ~g~L~V~V~~a~~L~~~d~~g~~dpyv~v~~--~~~~---~~kT~~~~~t~nP~Wne~f~~~v~--~-~~~~~L~v~v~d 334 (398)
...++|+|.++.++... ..++-||.+.+ |+.. ...|+.+.-+.+|.|||...|.+. + +....|.+++|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 56899999999988643 34677777544 4321 234555555778999999888763 2 356789999998
Q ss_pred cc---C--------------------CCCceeEEEEEECccccc
Q 015885 335 KD---I--------------------GQDKRLGIVKLPLIDLEA 355 (398)
Q Consensus 335 ~d---~--------------------~~d~~lG~~~i~l~~l~~ 355 (398)
.. . +.+..+|-+.+++-+...
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~ 472 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKG 472 (1092)
T ss_dssp C------------------------------CCEEEEESBCTTC
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECCcC
Confidence 63 1 113488999999877543
No 62
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=52.90 E-value=14 Score=26.50 Aligned_cols=20 Identities=20% Similarity=0.597 Sum_probs=11.2
Q ss_pred chhHHHHHHH-HHHHHHHHHH
Q 015885 3 LISGVFMGMI-FGIALMAGWR 22 (398)
Q Consensus 3 ~~~g~~~g~~-~~l~l~~~~~ 22 (398)
++.|.+.|++ +|+++++.|+
T Consensus 13 Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 13 VLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 3445555544 5666666665
No 63
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=50.09 E-value=22 Score=21.28 Aligned_cols=10 Identities=30% Similarity=1.065 Sum_probs=6.3
Q ss_pred chhHHHHHHH
Q 015885 3 LISGVFMGMI 12 (398)
Q Consensus 3 ~~~g~~~g~~ 12 (398)
+++|+++|++
T Consensus 5 lL~GIVlGli 14 (37)
T 1q90_G 5 LLCGIVLGLV 14 (37)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhHHHhhH
Confidence 4566666665
No 64
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=38.03 E-value=2.7e+02 Score=26.47 Aligned_cols=21 Identities=0% Similarity=0.169 Sum_probs=14.8
Q ss_pred eeEEEEEEEEEEEEEEEEEEE
Q 015885 162 ASIPIQLKDLQVFTVIRVIFQ 182 (398)
Q Consensus 162 ~~~~v~v~~l~~~g~~Rv~~~ 182 (398)
-.+.+.++++.+++.+|+...
T Consensus 102 G~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 102 GNFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEeeEEEEEEEEEeec
Confidence 345666777888888887754
No 65
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=36.34 E-value=40 Score=19.76 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=15.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 015885 2 GLISGVFMGMIFGIALMAGWRHM 24 (398)
Q Consensus 2 ~~~~g~~~g~~~~l~l~~~~~~~ 24 (398)
|-++|+++|-+.+.+++....++
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhh
Confidence 34778888887777766644443
No 66
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=35.58 E-value=27 Score=20.87 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=3.6
Q ss_pred chhHHHHHHH
Q 015885 3 LISGVFMGMI 12 (398)
Q Consensus 3 ~~~g~~~g~~ 12 (398)
+++|+++|++
T Consensus 5 lL~GIVlGli 14 (37)
T 1vf5_G 5 LLDGLVLGLV 14 (37)
T ss_dssp ----CHHHHH
T ss_pred hhhhHHHhhH
Confidence 3556666655
No 67
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=34.84 E-value=27 Score=22.00 Aligned_cols=22 Identities=5% Similarity=0.218 Sum_probs=10.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHH
Q 015885 3 LISGVFMGMIFGIALMAGWRHM 24 (398)
Q Consensus 3 ~~~g~~~g~~~~l~l~~~~~~~ 24 (398)
.+.|+++=.+++++++++|+|.
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHhhhh
Confidence 3445554444445555555544
No 68
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=30.11 E-value=54 Score=21.57 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=10.1
Q ss_pred HHHHHHHHH-HHHHHHHHHHhhhcc
Q 015885 6 GVFMGMIFG-IALMAGWRHMMRYRS 29 (398)
Q Consensus 6 g~~~g~~~~-l~l~~~~~~~~~~~~ 29 (398)
+.+.|+++- +.++..|+.-++.|+
T Consensus 15 svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 15 SAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHcCcccCC
Confidence 444555432 233335554444333
No 69
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=30.10 E-value=53 Score=20.45 Aligned_cols=21 Identities=19% Similarity=0.550 Sum_probs=13.3
Q ss_pred hHHHHHHH-HHHHHHHHHHHHh
Q 015885 5 SGVFMGMI-FGIALMAGWRHMM 25 (398)
Q Consensus 5 ~g~~~g~~-~~l~l~~~~~~~~ 25 (398)
.|.+.|.+ +|++++..|+...
T Consensus 14 ~gvi~~ivliGl~lLliwk~~~ 35 (43)
T 2k9j_B 14 LSVMGAILLIGLAALLIWKLLI 35 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 45555533 6777777777654
No 70
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.68 E-value=65 Score=21.19 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=8.9
Q ss_pred HHHHHHHHHH-HHHHHHHHHhh
Q 015885 6 GVFMGMIFGI-ALMAGWRHMMR 26 (398)
Q Consensus 6 g~~~g~~~~l-~l~~~~~~~~~ 26 (398)
+.+.|+++-. .++..|+.-++
T Consensus 18 svl~GLllL~li~~~LwK~GFF 39 (54)
T 2knc_A 18 GVLGGLLLLTILVLAMWKVGFF 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCcc
Confidence 4445554332 23334554433
No 71
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.25 E-value=1.2e+02 Score=21.63 Aligned_cols=12 Identities=8% Similarity=0.542 Sum_probs=5.9
Q ss_pred cchhHHH-HHHHH
Q 015885 2 GLISGVF-MGMIF 13 (398)
Q Consensus 2 ~~~~g~~-~g~~~ 13 (398)
|.++|++ +|+++
T Consensus 16 gvi~gilliGlll 28 (79)
T 2knc_B 16 SVMGAILLIGLAA 28 (79)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455655 44443
Done!