Query 015888
Match_columns 398
No_of_seqs 181 out of 712
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 04:16:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 4E-157 1E-161 1162.0 34.6 351 46-398 25-379 (379)
2 2qap_A Fructose-1,6-bisphospha 100.0 9E-154 3E-158 1143.7 34.7 354 44-398 34-391 (391)
3 2pc4_A 41 kDa antigen, fructos 100.0 1E-153 5E-158 1136.8 34.4 353 46-398 13-369 (369)
4 3mbd_A Fructose-bisphosphate a 100.0 5E-152 2E-156 1114.8 31.6 332 47-380 6-340 (342)
5 3mmt_A Fructose-bisphosphate a 100.0 2E-151 6E-156 1112.5 31.7 334 50-384 4-344 (347)
6 3bv4_A Fructose-bisphosphate a 100.0 8E-150 3E-154 1101.9 35.0 332 48-379 5-340 (341)
7 2iqt_A Fructose-bisphosphate a 100.0 3E-105 1E-109 773.7 19.9 273 57-366 6-293 (296)
8 3iv3_A Tagatose 1,6-diphosphat 97.2 0.017 5.9E-07 57.2 17.7 254 61-350 16-292 (332)
9 1to3_A Putative aldolase YIHT; 89.9 8.2 0.00028 37.1 15.1 245 62-348 11-264 (304)
10 1w8s_A FBP aldolase, fructose- 87.3 17 0.00058 34.0 15.0 172 144-366 76-250 (263)
11 2xw6_A MGS, methylglyoxal synt 61.8 13 0.00044 32.2 5.7 83 49-141 12-106 (134)
12 1vmd_A MGS, methylglyoxal synt 47.1 26 0.00088 31.9 5.3 84 48-141 35-130 (178)
13 2yvq_A Carbamoyl-phosphate syn 45.7 26 0.00087 29.9 4.9 73 49-130 33-115 (143)
14 1b93_A Protein (methylglyoxal 45.3 18 0.00063 32.0 4.0 83 49-141 20-114 (152)
15 3b8i_A PA4872 oxaloacetate dec 42.1 33 0.0011 33.0 5.5 137 52-232 67-213 (287)
16 3fst_A 5,10-methylenetetrahydr 41.8 1.4E+02 0.0048 28.7 9.9 159 44-231 30-214 (304)
17 1vcv_A Probable deoxyribose-ph 31.4 2.6E+02 0.0087 25.9 9.6 144 166-340 66-224 (226)
18 3bil_A Probable LACI-family tr 30.8 3.1E+02 0.011 25.1 13.2 164 110-298 121-311 (348)
19 3cer_A Possible exopolyphospha 23.4 1.4E+02 0.0047 28.9 6.4 96 196-317 63-161 (343)
20 1zlp_A PSR132, petal death pro 23.0 79 0.0027 30.9 4.6 45 163-224 185-229 (318)
21 3nw0_B Melanoma-associated ant 22.5 1.2E+02 0.0042 27.9 5.6 117 195-326 2-130 (217)
22 3l77_A Short-chain alcohol deh 21.9 1.8E+02 0.006 25.1 6.3 34 281-314 200-233 (235)
23 1r88_A MPT51/MPB51 antigen; AL 21.0 1.4E+02 0.0049 26.6 5.7 54 201-258 224-277 (280)
24 4do4_A Alpha-N-acetylgalactosa 20.8 1.2E+02 0.0042 29.0 5.4 58 128-189 83-141 (400)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=3.7e-157 Score=1162.05 Aligned_cols=351 Identities=53% Similarity=0.862 Sum_probs=331.8
Q ss_pred ccccchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCCCCCceEEEeecccccccc
Q 015888 46 IRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQS 125 (398)
Q Consensus 46 ~~~~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~ 125 (398)
.+..++++||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||+
T Consensus 25 ~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLftsp~~~~~IsGvILFeETl~Qk 104 (379)
T 3kx6_A 25 KLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQQ 104 (379)
T ss_dssp SCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCB
T ss_pred hcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcCcccccceeEEEcchhhcccc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC-CC--CcCHHHHH
Q 015888 126 TTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PN--GPSALAVR 202 (398)
Q Consensus 126 ~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i-~~--~Ps~~aI~ 202 (398)
++||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| ++ .||.++|.
T Consensus 105 ~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~aI~ 184 (379)
T 3kx6_A 105 APNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSIL 184 (379)
T ss_dssp CTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHHH
T ss_pred ccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 45 79999999
Q ss_pred HHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCC
Q 015888 203 EAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKAT 282 (398)
Q Consensus 203 ~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s 282 (398)
+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||+|||||||+||++|+.+++
T Consensus 185 ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k~s 264 (379)
T 3kx6_A 185 ETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKPA 264 (379)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCCC
T ss_pred HHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCC-CCCceeEEeehhhhhhhHHHhhcCCcccHHHHHH
Q 015888 283 PQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQG-PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQD 361 (398)
Q Consensus 283 ~~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~-~~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~ 361 (398)
|+|||++|+++|+|||||+||||+|||||||+||||.||||||+. ++||.||||||||||+++||+|.|++||+++||+
T Consensus 265 ~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsFSyGRALQ~s~LkaW~Gk~eNv~aaQ~ 344 (379)
T 3kx6_A 265 PQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCNKHPWSLSFSYGRALQSSVLKTWNGSMSNAAAAQD 344 (379)
T ss_dssp HHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhhcCCCCcceeeechhhhchHHHHHHhcCchhHHHHHH
Confidence 999999999999999999999999999999999999999999984 6799999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhcCcccCCCCcccccccccccCccC
Q 015888 362 TLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 398 (398)
Q Consensus 362 al~~rak~n~~A~~G~y~~~~~~~~~~~~l~~~~~~y 398 (398)
+|++|||+||+|++|||.++++ ++++||||+||.|
T Consensus 345 ~l~~Ra~~Ns~A~~Gky~~~~~--~a~~sl~v~~~~y 379 (379)
T 3kx6_A 345 VLMKLAQQNSEASLGSLKTDLS--DDGESLFEAKYIY 379 (379)
T ss_dssp HHHHHHHHHHHHTTTCCC----------------CCC
T ss_pred HHHHHHHhhhHHhcCCcCCCcc--cccccccccCccC
Confidence 9999999999999999998876 6789999999998
No 2
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=8.9e-154 Score=1143.72 Aligned_cols=354 Identities=48% Similarity=0.832 Sum_probs=333.2
Q ss_pred ccccccchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCCCCCceEEEeecccccc
Q 015888 44 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLY 123 (398)
Q Consensus 44 ~~~~~~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~l~~~IsGvILfeETl~ 123 (398)
++....++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++|||||||||||||
T Consensus 34 ~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILFeETl~ 113 (391)
T 2qap_A 34 YNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVG 113 (391)
T ss_dssp GCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecCCCccCceEEEEcchHhcc
Confidence 44456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcchHHHHHhCCceeeEecCCCcccCC-CCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC-CCCcCHHHH
Q 015888 124 QSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAV 201 (398)
Q Consensus 124 Q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~-g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i-~~~Ps~~aI 201 (398)
|+++||+||+|+|+++|||||||||||++||+ |+++|++|||||||++||++||++|||||||||||+| ++.||.++|
T Consensus 114 Qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~PS~~aI 193 (391)
T 2qap_A 114 QKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAV 193 (391)
T ss_dssp CBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHH
T ss_pred CcCcCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCCCHHHH
Confidence 99999999999999999999999999999999 8999999999999999999999999999999999999 688999999
Q ss_pred HHHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcC
Q 015888 202 REAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKA 281 (398)
Q Consensus 202 ~~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~ 281 (398)
.+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|||||+|||||||+||++|+.++
T Consensus 194 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~~~~k~ 273 (391)
T 2qap_A 194 RFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTA 273 (391)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCC
T ss_pred HHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCC--CCCceeEEeehhhhhhhHHHhhcCCcccHHHH
Q 015888 282 TPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAA 359 (398)
Q Consensus 282 s~~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~--~~PW~lsFSfgRALq~~~lk~W~G~~env~aA 359 (398)
+|+|||++|+++|+|||||+||||+|||||||+||||.||||||+. ++||.||||||||||+++||+|.||+||+++|
T Consensus 274 s~eevA~~Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRALq~s~LkaW~Gk~eNv~aa 353 (391)
T 2qap_A 274 APEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSALKAWGGKESGLAAG 353 (391)
T ss_dssp CHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHHHHHTTSGGGHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHHhHHHHHHhcCCchhHHHH
Confidence 9999999999999999999999999999999999999999999984 46999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhcCcccCCCCcccccccccccCccC
Q 015888 360 QDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 398 (398)
Q Consensus 360 Q~al~~rak~n~~A~~G~y~~~~~~~~~~~~l~~~~~~y 398 (398)
|++|++|||+||+|++|+|.++.+ .++++||||+||+|
T Consensus 354 Q~~l~~Ra~~Ns~A~~Gky~~~~~-~~~~~sl~v~~~~y 391 (391)
T 2qap_A 354 RRAFLHRARMNSMAQLGKYKRSDD-DASSSSLYVKGNTY 391 (391)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGC-C-------------
T ss_pred HHHHHHHHHhchHhhCcccCCCCC-ccccCceeeccccC
Confidence 999999999999999999987766 35688999999998
No 3
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=1.4e-153 Score=1136.80 Aligned_cols=353 Identities=55% Similarity=0.889 Sum_probs=337.8
Q ss_pred ccccchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCCCCCceEEEeecccccccc
Q 015888 46 IRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQS 125 (398)
Q Consensus 46 ~~~~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~ 125 (398)
....++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||+
T Consensus 13 ~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~tsp~~~~~IsGvILfeETl~qk 92 (369)
T 2pc4_A 13 KLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQK 92 (369)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTCB
T ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccCCCcccceEEEEcchHhccCc
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC-C--CCcCHHHHH
Q 015888 126 TTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-P--NGPSALAVR 202 (398)
Q Consensus 126 ~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i-~--~~Ps~~aI~ 202 (398)
++||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| + +.||.++|.
T Consensus 93 ~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~~PS~~aI~ 172 (369)
T 2pc4_A 93 NEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIH 172 (369)
T ss_dssp CTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHHH
T ss_pred CcCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCCCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 5 789999999
Q ss_pred HHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCC
Q 015888 203 EAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKAT 282 (398)
Q Consensus 203 ~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s 282 (398)
+|++.|||||+|||++||||||||||||||||||++|++|+|+||+++|++|++|+|||||+|||||||+||++|+.++|
T Consensus 173 ~na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~G~~~~~k~s 252 (369)
T 2pc4_A 173 ETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTT 252 (369)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCC
T ss_pred HHHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhC-CCCCceeEEeehhhhhhhHHHhhcCCcccHHHHHH
Q 015888 283 PQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQD 361 (398)
Q Consensus 283 ~~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~-~~~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~ 361 (398)
|+|||++|+++|+|||||+||||+|||||||+||||.||||||+ .++||+||||||||||+++||+|.|++||+++||+
T Consensus 253 ~e~vA~~Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~~~PW~lsFSygRALq~~~lk~W~Gk~env~aaQ~ 332 (369)
T 2pc4_A 253 TQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKARE 332 (369)
T ss_dssp HHHHHHHHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHTTTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCCCCCceeEEehHHhhhhHHHHHhCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 45799999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhcCcccCCCCcccccccccccCccC
Q 015888 362 TLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 398 (398)
Q Consensus 362 al~~rak~n~~A~~G~y~~~~~~~~~~~~l~~~~~~y 398 (398)
+|++|||+||+|++|+|.++....++++||||+||.|
T Consensus 333 ~l~~ra~~n~~A~~G~y~~~~~~~~~~~sl~v~~~~y 369 (369)
T 2pc4_A 333 VLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369 (369)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCC-----CCCCCCC---
T ss_pred HHHHHHHhhhHHhcCcccCCCCccccccceeeccccC
Confidence 9999999999999999987664445688999999998
No 4
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=5.2e-152 Score=1114.82 Aligned_cols=332 Identities=39% Similarity=0.620 Sum_probs=326.3
Q ss_pred cccchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCCCCCceEEEeeccccccccc
Q 015888 47 RAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST 126 (398)
Q Consensus 47 ~~~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~~ 126 (398)
+..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||++
T Consensus 6 ~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILfeETl~qk~ 85 (342)
T 3mbd_A 6 MDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTS 85 (342)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGCBC
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcCcccccceeEEEcchhhccccc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC-CCCcCHHHHHHHH
Q 015888 127 TDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVREAA 205 (398)
Q Consensus 127 ~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i-~~~Ps~~aI~~na 205 (398)
+||+||+|+|+++|||||||||||++|| +++|++|||||||++||++||++|||||||||||+| ++.||.++|.+|+
T Consensus 86 ~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~ena 163 (342)
T 3mbd_A 86 GSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENC 163 (342)
T ss_dssp TTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHHHH
T ss_pred cCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999 889999999999999999999999999999999999 6789999999999
Q ss_pred HHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCChHH
Q 015888 206 WGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQ 285 (398)
Q Consensus 206 ~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~~e 285 (398)
+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||+|||||||+||++|+.++||+|
T Consensus 164 ~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s~ee 243 (342)
T 3mbd_A 164 SILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKK 243 (342)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCCHHH
T ss_pred HHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCC--CCCceeEEeehhhhhhhHHHhhcCCcccHHHHHHHH
Q 015888 286 VAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTL 363 (398)
Q Consensus 286 VA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~--~~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~al 363 (398)
||++|+++|+|||||+||||+|||||||+||||.||||||+. ++||.||||||||||+++||+|.|++||+++||++|
T Consensus 244 VA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~~l 323 (342)
T 3mbd_A 244 VATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKIL 323 (342)
T ss_dssp HHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEecchhhhhHHHHHhcCCcccHHHHHHHH
Confidence 999999999999999999999999999999999999999984 479999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCcccC
Q 015888 364 LTRAKANSLAQLGKYTG 380 (398)
Q Consensus 364 ~~rak~n~~A~~G~y~~ 380 (398)
++|||+||+|++|||..
T Consensus 324 ~~Ra~~N~~A~~Gky~~ 340 (342)
T 3mbd_A 324 LETSFKACRGAEGKLWD 340 (342)
T ss_dssp HHHHHHHHHHHTTCTTC
T ss_pred HHHHHHhhHHhCCCCcC
Confidence 99999999999999974
No 5
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=1.9e-151 Score=1112.49 Aligned_cols=334 Identities=50% Similarity=0.809 Sum_probs=327.4
Q ss_pred chHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhccc-CCCCCceEEEeecccccccccCC
Q 015888 50 SYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTA-PGLGQYISGAILFEETLYQSTTD 128 (398)
Q Consensus 50 ~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~tt-p~l~~~IsGvILfeETl~Q~~~d 128 (398)
.+.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||| |++++||||||||||||||+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 34589999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC--CCCcCHHHHHHHHH
Q 015888 129 GKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI--PNGPSALAVREAAW 206 (398)
Q Consensus 129 G~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i--~~~Ps~~aI~~na~ 206 (398)
|+||+|+|+++|||||||||||++||+|+++|++|||||||.+||++||++|||||||||||+| ++.||.++|.+|++
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 46799999999999
Q ss_pred HHHHHHHHHHHCCcceeecceecCCC---CCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCCh
Q 015888 207 GLARYAAIAQDNGLVPIVEPEILLDG---DHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATP 283 (398)
Q Consensus 207 ~LArYAaicQ~~GLVPIVEPEVl~dG---~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~ 283 (398)
.|||||+|||++|||||||||||||| ||||++|++|||+||++||++|++|||+|||+|||||||+||++ +.++||
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~-~~k~s~ 242 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKD-ARIASV 242 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTT-SCCCCH
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCC-CCcCCH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhC-CCCCceeEEeehhhhhhhHHHhhcCCcccHHHHHHH
Q 015888 284 QQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDT 362 (398)
Q Consensus 284 ~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~-~~~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~a 362 (398)
+|||++|+++|+||||++||||+|||||||+||||.||||||+ .++||.||||||||||+++||+|.|++||+++||++
T Consensus 243 eevA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~~ 322 (347)
T 3mmt_A 243 EEVAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNALGALPWKLTFSYGRALQAAALKAWAGKNENIVVAQKA 322 (347)
T ss_dssp HHHHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTSCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCeeeEeccchhhhHHHHHHhCCChhhHHHHHHH
Confidence 9999999999999999999999999999999999999999998 578999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhcCcccCCCCc
Q 015888 363 LLTRAKANSLAQLGKYTGEGES 384 (398)
Q Consensus 363 l~~rak~n~~A~~G~y~~~~~~ 384 (398)
|++|||+||+|++|+|++++|.
T Consensus 323 ~~~Ra~~N~~A~~G~y~~~~e~ 344 (347)
T 3mmt_A 323 FCHRARMNHLAALGQWTKDQEK 344 (347)
T ss_dssp HHHHHHHHHHHHTTCCCGGGC-
T ss_pred HHHHHHHhHHHHcCCcCccccc
Confidence 9999999999999999988774
No 6
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=7.9e-150 Score=1101.95 Aligned_cols=332 Identities=54% Similarity=0.849 Sum_probs=326.9
Q ss_pred ccchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCC-CCCceEEEeeccccccccc
Q 015888 48 AGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQST 126 (398)
Q Consensus 48 ~~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~-l~~~IsGvILfeETl~Q~~ 126 (398)
..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||+ +++||||||||||||||++
T Consensus 5 ~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~qk~ 84 (341)
T 3bv4_A 5 TPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKA 84 (341)
T ss_dssp CHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTCBC
T ss_pred CHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhccccC
Confidence 357899999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccC-CCCcCHHHHHHHH
Q 015888 127 TDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVREAA 205 (398)
Q Consensus 127 ~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i-~~~Ps~~aI~~na 205 (398)
+||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| ++.||..+|.+|+
T Consensus 85 ~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~~na 164 (341)
T 3bv4_A 85 DDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENA 164 (341)
T ss_dssp TTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHHHH
T ss_pred cCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 6889999999999
Q ss_pred HHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCChHH
Q 015888 206 WGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQ 285 (398)
Q Consensus 206 ~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~~e 285 (398)
+.|||||+|||++||||||||||||||+|||++|++|+|+||+++|++|++|+|||||+|||||||+||++|+.+++++|
T Consensus 165 ~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~~e~ 244 (341)
T 3bv4_A 165 NVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEE 244 (341)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHHH
T ss_pred HHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCCC--CCceeEEeehhhhhhhHHHhhcCCcccHHHHHHHH
Q 015888 286 VAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTL 363 (398)
Q Consensus 286 VA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~~--~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~al 363 (398)
||++|+++|+|||||+||||+|||||||+||||.||||||+.+ +||.||||||||||+++||+|.|++||+++||++|
T Consensus 245 va~~Tv~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRALq~~~lk~W~Gk~env~aaQ~~l 324 (341)
T 3bv4_A 245 IAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEY 324 (341)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHHhHHHHHHhCCChhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999843 59999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCccc
Q 015888 364 LTRAKANSLAQLGKYT 379 (398)
Q Consensus 364 ~~rak~n~~A~~G~y~ 379 (398)
++|||+||+|++|+|.
T Consensus 325 ~~ra~~n~~A~~G~y~ 340 (341)
T 3bv4_A 325 VKRALANSLACQGKYT 340 (341)
T ss_dssp HHHHHHHHHHTTTCCC
T ss_pred HHHHHhhhHHhcCcCC
Confidence 9999999999999996
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.8e-105 Score=773.67 Aligned_cols=273 Identities=26% Similarity=0.338 Sum_probs=248.5
Q ss_pred HHHHHhcCCCCceEee-ccCCcchHHHHhhcCCCCchhh--------hhhhhhhhcccCCC-CCceEEEeeccccccccc
Q 015888 57 KTAKTVASPGRGILAM-DESNATCGKRLASIGLENTEAN--------RQAYRTLLVTAPGL-GQYISGAILFEETLYQST 126 (398)
Q Consensus 57 ~tA~~i~a~gKGILA~-DES~gT~~KRl~~iGienteen--------Rr~yRelL~ttp~l-~~~IsGvILfeETl~Q~~ 126 (398)
....+.++|||||||+ |||+|||+|||++|||||||+| ||+||+||||||++ ++||||||||||||||++
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~ 85 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI 85 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC
Confidence 3455678999999955 9999999999999999999999 69999999999996 999999999999999985
Q ss_pred CCCcchHHHH-HhCCceeeEecCCCcccCC-CCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHHHHH
Q 015888 127 TDGKKMVDVL-VEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREA 204 (398)
Q Consensus 127 ~dG~~~~~~L-~~kGIvPGIKVDkGl~pl~-g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI~~n 204 (398)
||+||+++| +++|||||||||||++||+ |.++|++|||||||++||++||++| |||||||+|.+ ..+|.+|
T Consensus 86 -dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~---~~aI~~n 158 (296)
T 2iqt_A 86 -EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN---EQGIRDI 158 (296)
T ss_dssp -TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC---HHHHHHH
T ss_pred -CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc---hhHHHHH
Confidence 999999999 5899999999999999999 7899999999999999999996555 99999999974 8999999
Q ss_pred HHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCChH
Q 015888 205 AWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQ 284 (398)
Q Consensus 205 a~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~~ 284 (398)
++.|||||+|||++||||||||||||||+ |+++|++|+++||+++|++|++ +|||||+| ||++| +++
T Consensus 159 a~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~----~~~ 225 (296)
T 2iqt_A 159 VEQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN----FYK 225 (296)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT----TTH
T ss_pred HHHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC----CHH
Confidence 99999999999999999999999999999 9999999999999999999999 99998877 99998 567
Q ss_pred HHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCCCCCceeEEeehhhhhhhHHHhhcCCcc---cHHHHHH
Q 015888 285 QVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPE---NVKAAQD 361 (398)
Q Consensus 285 eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~~~PW~lsFSfgRALq~~~lk~W~G~~e---nv~aAQ~ 361 (398)
+||+ ||+||||+|||||||+||||.|||+||. ||||||||||+++ ..|..+.| .+.++-+
T Consensus 226 ~va~----------ppaVpgVvfLSGGqSeeeAt~~L~a~n~------l~fSfgRALq~~l-~~~q~d~ef~~~l~~~i~ 288 (296)
T 2iqt_A 226 EIIE----------HPMMLRVVALSGGYSREQANELLSRNHG------VIASFSRALVEGL-SARQTDAEFNAMLEASIE 288 (296)
T ss_dssp HHHT----------STTEEEEEEECTTCCHHHHHHHHTTSTT------CEEEESHHHHTTC-CTTSCHHHHHHHHHHHHH
T ss_pred hhcC----------CCCCCeeeeCCCCCCHHHHHHHHHhcCC------cEEEeHHHhhChh-hhccCHHHHHHHHHHHHH
Confidence 8775 9999999999999999999999999982 7999999999996 66777654 2445555
Q ss_pred HHHHH
Q 015888 362 TLLTR 366 (398)
Q Consensus 362 al~~r 366 (398)
.+++.
T Consensus 289 ~iy~a 293 (296)
T 2iqt_A 289 DVYQA 293 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 8
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.18 E-value=0.017 Score=57.17 Aligned_cols=254 Identities=17% Similarity=0.134 Sum_probs=147.8
Q ss_pred Hhc-CCCCc-eEeeccCCcchHHHHhhcCCCC-chhhhhhhhhhhcccCCCCCceEEEeecccccccccCCCcchHHHH-
Q 015888 61 TVA-SPGRG-ILAMDESNATCGKRLASIGLEN-TEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVL- 136 (398)
Q Consensus 61 ~i~-a~gKG-ILA~DES~gT~~KRl~~iGien-teenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~~~dG~~~~~~L- 136 (398)
+|. ..|+- |+|+|+. +++++-++..|-.. +.+.-..+++++... +..+.+||+|.++ +.+.. ....
T Consensus 16 ri~~~~g~~~ilA~DHR-~sl~~m~~~~~~~~~~~~~l~~~K~lv~~~--~~~~asaILlD~~-~G~~a------~~~~~ 85 (332)
T 3iv3_A 16 KVSDSNGVISALAFDQR-GALKCLMAQYQMKEPTVAQMEELKVLVSEE--LTPYASSILLDPE-YGLPA------AQARD 85 (332)
T ss_dssp HTSCTTSCEEEEEECCS-HHHHHHHHTTTTSCCCHHHHHHHHHHHHHH--HGGGSSEEEECTT-TCHHH------HHTSC
T ss_pred HHhCCCCCEEEEEcCCh-hHHHHHHHhcCCCCCChHHHHHHHHHHHHH--HhcCCcEEEEchh-hCHHH------hcccc
Confidence 344 34444 9999996 46777787776432 345556777777532 4455777655444 43221 1111
Q ss_pred HhCCceeeEecCCCcccCCCCC----CCCCCCCchhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHH-HHHHHHHHHH
Q 015888 137 VEQNIVPGIKVDKGLVPLAGSN----DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV-REAAWGLARY 211 (398)
Q Consensus 137 ~~kGIvPGIKVDkGl~pl~g~~----~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI-~~na~~LArY 211 (398)
.+.|++.++ ++ +|.. +..+..=++.=.+++.+ +||..-|--.-+..+..+ .+ .++...|.|.
T Consensus 86 ~~~GLii~~--E~-----~G~~~~~~gr~p~~l~~~sve~a~~---~GADAVk~lv~~g~d~~~---e~~~~q~~~l~rv 152 (332)
T 3iv3_A 86 REAGLLLAY--EK-----TGYDANTTSRLPDCLVDWSIKRLKE---AGADAVKFLLYYDVDGDP---QVNVQKQAYIERI 152 (332)
T ss_dssp TTCEEEEEC--BC-----CCCCTTSSCCCCCBCTTCCHHHHHH---TTCSEEEEEEEECTTSCH---HHHHHHHHHHHHH
T ss_pred CCCcEEEEe--cc-----CCCCcCCCCCCCccccccCHHHHHH---cCCCEEEEEEEcCCCchH---HHHHHHHHHHHHH
Confidence 466777655 22 1110 00011112333556554 699988876555443333 23 4677889999
Q ss_pred HHHHHHCCcceeecceecC---CCCCchhHHHHHHHHHHHHHHHHH--hhCCccccccccccccCCCCCc--------cC
Q 015888 212 AAIAQDNGLVPIVEPEILL---DGDHGIDRTFEVAQKVWAEVFFYL--AENNVMFEGILLKPSMVTPGAE--------CK 278 (398)
Q Consensus 212 AaicQ~~GLVPIVEPEVl~---dG~h~i~~~~~vte~vl~~v~~~L--~~~~V~leG~lLKpnMV~pG~~--------~~ 278 (398)
+.-|++.|+-=++||=... .++||.+. .++-..++....+.+ .+.|+++ +|..+ ||.- +.
T Consensus 153 ~~ec~~~GiPlllEil~y~~~~~~~~~~~~-a~~~p~~V~~a~R~~~~~elGaDv----~Kve~--p~~~~~v~g~~~~~ 225 (332)
T 3iv3_A 153 GSECQAEDIPFFLEILTYDETISNNSSVEF-AKVKVHKVNDAMKVFSAERFGIDV----LKVEV--PVNMVYVEGFAEGE 225 (332)
T ss_dssp HHHHHHHTCCEEEEEEECBTTBSCTTSHHH-HTTHHHHHHHHHHHHTSGGGCCSE----EEECC--SSCGGGBTTTCSSC
T ss_pred HHHHHHcCCceEEEEeccCCCCCCCcchhh-hccCHHHHHHHHHHHhhcCcCCcE----EEEec--CCChhhhccccccc
Confidence 9999999997788774423 35676653 233444555566777 3457764 89886 4421 12
Q ss_pred CcCChHHHHHHHHHHhhhcCCCCCceeeecCCCCChHHHHHHh-hhhhCCCCCceeEEeehhhhhhhHHHhhc
Q 015888 279 EKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNL-NAMNQGPNPWHVSFSYARALQNTCLKTWG 350 (398)
Q Consensus 279 ~~~s~~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSeeeAt~~L-nAiN~~~~PW~lsFSfgRALq~~~lk~W~ 350 (398)
.-+|-+|.++.--++.. .. .|| ++|||||-|.++--.-| .||-.+ .+| -.+..||++=+++++.+.
T Consensus 226 ~~y~~~ea~~~f~~~~~-a~--~~P-~v~lsgG~~~~~fl~~v~~A~~aG-a~f-~Gv~~GRnvwq~~v~~~~ 292 (332)
T 3iv3_A 226 VVYSKEEAAQAFREQEA-ST--DLP-YIYLSAGVSAELFQETLVFAHKAG-AKF-NGVLCGRATWAGSVQVYM 292 (332)
T ss_dssp CCBCHHHHHHHHHHHHH-TC--SSC-EEEECTTCCHHHHHHHHHHHHHHT-CCC-CEEEECHHHHTTHHHHHH
T ss_pred ccccHHHHHHHHHHHHh-cC--CCC-EEEECCCCCHHHHHHHHHHHHHcC-CCc-ceEEeeHHHHHhhhhhhc
Confidence 33455665554444333 22 233 67999999988777666 344432 222 679999999888777654
No 9
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.95 E-value=8.2 Score=37.13 Aligned_cols=245 Identities=16% Similarity=0.184 Sum_probs=122.8
Q ss_pred hc-CCCCc-eEeeccCCcchHHHHhhcCCCCc--hhhhhhhhhhhcccCCCCCceEEEeecccccccc-cCCCcchHHHH
Q 015888 62 VA-SPGRG-ILAMDESNATCGKRLASIGLENT--EANRQAYRTLLVTAPGLGQYISGAILFEETLYQS-TTDGKKMVDVL 136 (398)
Q Consensus 62 i~-a~gKG-ILA~DES~gT~~KRl~~iGient--eenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~-~~dG~~~~~~L 136 (398)
|. ..|+- |+|+|+ ..++-+-|...|-... .+.-..+..++.. .+..+.+|+++..+-.... ...+ .+-
T Consensus 11 i~~~~G~~~ilA~Dh-r~~l~~~~~~~g~~~~~~~~~l~~~k~lv~~--~~~~~~~avl~~~g~~~~a~~~~~----~~~ 83 (304)
T 1to3_A 11 ITRASGGFAMLAVDQ-REAMRLMFAAAGAKTPVADSVLTDFKVNAAK--ILSPYASAVLLDQQFCYRQAVEQN----AVA 83 (304)
T ss_dssp GSCTTSCEEEEECCC-CHHHHHHHHHTTCCSSCCHHHHHHHHHHHHH--HHGGGCSEEEECTTTTHHHHHHTT----CSC
T ss_pred HhCCCCCEEEEEccC-hhHHHHHHHhcCCCCCcccchhhhHHHHHHH--HHhcCCCEEEeCHHHHHHHhhccc----ccC
Confidence 44 34554 999999 6777777777774222 1112333333321 1234477766655543210 0000 011
Q ss_pred HhCCceeeEecCCCcccCCCCCCCCCCC-Cc--hhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHHHHHHHHHHHHHH
Q 015888 137 VEQNIVPGIKVDKGLVPLAGSNDESWCQ-GL--DGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAA 213 (398)
Q Consensus 137 ~~kGIvPGIKVDkGl~pl~g~~~E~~t~-GL--DgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI~~na~~LArYAa 213 (398)
.+.|++ ||++.. .|+.+ +...+ =+ +.-.+++ .+.||..-|--..+. .+.|. .++-..+++...
T Consensus 84 ~~~gli--l~l~~~-~~l~~---~~~~~~l~~~~~~ve~a---~~~GAdaV~vlv~~~-~d~~~----~~~~~~i~~v~~ 149 (304)
T 1to3_A 84 KSCAMI--VAADDF-IPGNG---IPVDNVVLDKKINAQAV---KRDGAKALKLLVLWR-SDEDA----QQRLNMVKEFNE 149 (304)
T ss_dssp TTSEEE--EECEEE-EEETT---EEEEEEEECSSCCHHHH---HHTTCCEEEEEEEEC-TTSCH----HHHHHHHHHHHH
T ss_pred CCCcEE--EEECCC-CCCCC---CccchhhccCchhHHHH---HHcCCCEEEEEEEcC-CCccH----HHHHHHHHHHHH
Confidence 123333 344431 12210 10000 01 1223344 457998888332222 22332 566677888889
Q ss_pred HHHHCCcceeecceecCCCCCchh-HHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCChHHHHHHHHH
Q 015888 214 IAQDNGLVPIVEPEILLDGDHGID-RTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLK 292 (398)
Q Consensus 214 icQ~~GLVPIVEPEVl~dG~h~i~-~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~~eVA~~T~~ 292 (398)
.|.+.|+-=||| +..+|.|--+ ... ........+...+.|++ ++|....+-|.. ++++..+..-.
T Consensus 150 ~~~~~G~p~lv~--~~~~g~~v~~~~~~---~~~v~~aa~~a~~lGaD----~iKv~~~~~~~g-----~~~~~~~vv~~ 215 (304)
T 1to3_A 150 LCHSNGLLSIIE--PVVRPPRCGDKFDR---EQAIIDAAKELGDSGAD----LYKVEMPLYGKG-----ARSDLLTASQR 215 (304)
T ss_dssp HHHTTTCEEEEE--EEECCCSSCSCCCH---HHHHHHHHHHHTTSSCS----EEEECCGGGGCS-----CHHHHHHHHHH
T ss_pred HHHHcCCcEEEE--EECCCCccccCCCh---hHHHHHHHHHHHHcCCC----EEEeCCCcCCCC-----CHHHHHHHHHh
Confidence 999999988888 4445543100 000 12233334455567775 478776322211 44554433322
Q ss_pred HhhhcCCCCCceeeecCCCCChHHHHHHhhhhhCCCCCceeEEeehhhhhhhHHHh
Q 015888 293 LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKT 348 (398)
Q Consensus 293 ~l~rtvPpaVpgIvFLSGGqSeeeAt~~LnAiN~~~~PW~lsFSfgRALq~~~lk~ 348 (398)
+... ..+| .++++||-++++.-.++...-+ -+.-.|..||++-+..++.
T Consensus 216 -~~~~--~~~P-~Vv~aGG~~~~~~~~~~~~a~~---aGa~Gv~vGRaI~q~~~~~ 264 (304)
T 1to3_A 216 -LNGH--INMP-WVILSSGVDEKLFPRAVRVAME---AGASGFLAGRAVWSSVIGL 264 (304)
T ss_dssp -HHHT--CCSC-EEECCTTSCTTTHHHHHHHHHH---TTCCEEEESHHHHGGGTTC
T ss_pred -cccc--CCCC-eEEEecCCCHHHHHHHHHHHHH---cCCeEEEEehHHhCccccC
Confidence 2211 1233 4789999988775555554332 2468999999998876653
No 10
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=87.33 E-value=17 Score=33.97 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=93.7
Q ss_pred eEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHHHHHHHHHHHHHHHHHHCCccee
Q 015888 144 GIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPI 223 (398)
Q Consensus 144 GIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI~~na~~LArYAaicQ~~GLVPI 223 (398)
-+|++.+. .++|. .++.-+-. .+.+..+.||..=++|--++- .....+ -..+++....|.+.|+-=|
T Consensus 76 iv~~~~~~-~~~g~---~~~~~~~~---~ve~Ai~~Ga~~v~~~~nig~---~~~~~~---~~~~~~v~~~~~~~~~~vI 142 (263)
T 1w8s_A 76 ILKLNGKT-TLYNG---EPVSVANC---SVEEAVSLGASAVGYTIYPGS---GFEWKM---FEELARIKRDAVKFDLPLV 142 (263)
T ss_dssp EEECEECC-TTCCS---SCCCEESS---CHHHHHHTTCSEEEEEECTTS---TTHHHH---HHHHHHHHHHHHHHTCCEE
T ss_pred EEEEeCCC-CcCCC---CccchHHH---HHHHHHHCCCCEEEEEEecCC---cCHHHH---HHHHHHHHHHHHHcCCeEE
Confidence 36777666 23332 12332222 333444579999998765552 233333 3444555578999886557
Q ss_pred ecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCCccCCcCChHHHHHHHHHHhhhcCCCCCc
Q 015888 224 VEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVP 303 (398)
Q Consensus 224 VEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~~~~~~~s~~eVA~~T~~~l~rtvPpaVp 303 (398)
+| ...+|.|--+ .. +...+....+...+.|+++ +|.+. || +++. ++.+++.+ +.+|
T Consensus 143 i~--~~~~G~~~~~-~~--s~~~i~~a~~~a~~~GAD~----vkt~~--~~-------~~e~-----~~~~~~~~-~~~p 198 (263)
T 1w8s_A 143 VE--SFPRGGKVVN-ET--APEIVAYAARIALELGADA----MKIKY--TG-------DPKT-----FSWAVKVA-GKVP 198 (263)
T ss_dssp EE--ECCCSTTCCC-TT--CHHHHHHHHHHHHHHTCSE----EEEEC--CS-------SHHH-----HHHHHHHT-TTSC
T ss_pred EE--eeCCCCcccc-CC--CHHHHHHHHHHHHHcCCCE----EEEcC--CC-------CHHH-----HHHHHHhC-CCCe
Confidence 75 6777876311 00 0111111122233455654 78883 43 3444 44445555 3356
Q ss_pred eeeecCCCC---ChHHHHHHhhhhhCCCCCceeEEeehhhhhhhHHHhhcCCcccHHHHHHHHHHH
Q 015888 304 GIMFLSGGQ---SEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTR 366 (398)
Q Consensus 304 gIvFLSGGq---SeeeAt~~LnAiN~~~~PW~lsFSfgRALq~~~lk~W~G~~env~aAQ~al~~r 366 (398)
+..|||- +.+++-+++...-+ ...-..|.||++-++ +|..++-++|.+.
T Consensus 199 --V~asGGi~~~~~~~~l~~i~~~~~---aGA~GvsvgraI~~~---------~dp~~~~~~l~~~ 250 (263)
T 1w8s_A 199 --VLMSGGPKTKTEEDFLKQVEGVLE---AGALGIAVGRNVWQR---------RDALKFARALAEL 250 (263)
T ss_dssp --EEEECCSCCSSHHHHHHHHHHHHH---TTCCEEEESHHHHTS---------TTHHHHHHHHHHH
T ss_pred --EEEEeCCCCCCHHHHHHHHHHHHH---cCCeEEEEehhhcCC---------cCHHHHHHHHHHH
Confidence 6788988 46788888843332 122378899998654 4666666666544
No 11
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=61.85 E-value=13 Score=32.23 Aligned_cols=83 Identities=19% Similarity=0.259 Sum_probs=63.2
Q ss_pred cchHHHHHHHHHHhcCC--CCceEeeccCCcchHHHHhh-cCCCCch------hhhhhhhhhhcccCCCCCceEEEeecc
Q 015888 49 GSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTE------ANRQAYRTLLVTAPGLGQYISGAILFE 119 (398)
Q Consensus 49 ~~~~~eL~~tA~~i~a~--gKGILA~DES~gT~~KRl~~-iGiente------enRr~yRelL~ttp~l~~~IsGvILfe 119 (398)
...++++...|+++..- |-.|.| |+++++.|+. -||+-+. +.|...-++| .+..|.-||-|.
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-----~~geIdlVInt~ 82 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARV-----AEGRILAVIFFR 82 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHH-----HTTCEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHH-----HCCCccEEEEcc
Confidence 45789999999999998 999999 9999999998 9998654 3344444554 246799999999
Q ss_pred c--ccccc-cCCCcchHHHHHhCCc
Q 015888 120 E--TLYQS-TTDGKKMVDVLVEQNI 141 (398)
Q Consensus 120 E--Tl~Q~-~~dG~~~~~~L~~kGI 141 (398)
+ + .|. ..||..+-..--..+|
T Consensus 83 ~pl~-~~~h~~D~~~IrR~A~~~~I 106 (134)
T 2xw6_A 83 DPLT-AQPHEPDVQALLRVCDVHGV 106 (134)
T ss_dssp CTTT-CCTTSCCSHHHHHHHHHHTC
T ss_pred Cccc-CCCccchHHHHHHHHHHcCC
Confidence 9 6 566 6788766655545553
No 12
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=47.12 E-value=26 Score=31.94 Aligned_cols=84 Identities=19% Similarity=0.216 Sum_probs=63.1
Q ss_pred ccchHHHHHHHHHHhcCC--CCceEeeccCCcchHHHHhh-cCCCCchh------hhhhhhhhhcccCCCCCceEEEeec
Q 015888 48 AGSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTEA------NRQAYRTLLVTAPGLGQYISGAILF 118 (398)
Q Consensus 48 ~~~~~~eL~~tA~~i~a~--gKGILA~DES~gT~~KRl~~-iGientee------nRr~yRelL~ttp~l~~~IsGvILf 118 (398)
....++++...|+++..- |-.|.| |+++++.|+. .||+-+.- .|...-++| .+..|.-||-|
T Consensus 35 ~D~dK~~lv~~ak~~~~lL~Gf~L~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I-----~~geIdlVInt 105 (178)
T 1vmd_A 35 HDRRKRDLLEWVSFNLGTLSKHELYA----TGTTGALLQEKLGLKVHRLKSGPLGGDQQIGAMI-----AEGKIDVLIFF 105 (178)
T ss_dssp CGGGHHHHHHHHHHSHHHHTTSEEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHH-----HTTSCCEEEEE
T ss_pred ehhhHHHHHHHHHHHHHHhcCCEEEE----chHHHHHHHHHhCceeEEEeecCCCCCchHHHHH-----HCCCccEEEEc
Confidence 356789999999999998 888999 9999999999 99987543 344444444 24678899999
Q ss_pred cc--ccccc-cCCCcchHHHHHhCCc
Q 015888 119 EE--TLYQS-TTDGKKMVDVLVEQNI 141 (398)
Q Consensus 119 eE--Tl~Q~-~~dG~~~~~~L~~kGI 141 (398)
.+ + .|. ..||..+-..--..+|
T Consensus 106 ~dPl~-~~~h~~D~~~IRR~A~~~~I 130 (178)
T 1vmd_A 106 WDPLE-PQAHDVDVKALIRIATVYNI 130 (178)
T ss_dssp CCSSS-CCTTSCCHHHHHHHHHHTTC
T ss_pred cCccC-CCcccccHHHHHHHHHHcCC
Confidence 98 6 555 5687666655555654
No 13
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=45.70 E-value=26 Score=29.88 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhh------h----hhhhhhhcccCCCCCceEEEeec
Q 015888 49 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEAN------R----QAYRTLLVTAPGLGQYISGAILF 118 (398)
Q Consensus 49 ~~~~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteen------R----r~yRelL~ttp~l~~~IsGvILf 118 (398)
...++++...|+++..-|--|.| ++.+.+.|+..||+-+.-+ | ...+++|- +..|.-||-+
T Consensus 33 d~dK~~l~~~a~~l~~lGf~i~A----T~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-----~g~i~lVInt 103 (143)
T 2yvq_A 33 QSFRPRFLGVAEQLHNEGFKLFA----TEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-----DGSIDLVINL 103 (143)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEE----EHHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-----TTSCCEEEEC
T ss_pred ccchHHHHHHHHHHHHCCCEEEE----CchHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-----CCCceEEEEC
Confidence 45788999999999998888998 6677999999999876522 3 34444442 3457777777
Q ss_pred ccccccccCCCc
Q 015888 119 EETLYQSTTDGK 130 (398)
Q Consensus 119 eETl~Q~~~dG~ 130 (398)
.+...|...||.
T Consensus 104 ~~~~~~~~~d~~ 115 (143)
T 2yvq_A 104 PNNNTKFVHDNY 115 (143)
T ss_dssp CCCCGGGHHHHH
T ss_pred CCCCCcCCccHH
Confidence 665444433443
No 14
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=45.32 E-value=18 Score=31.95 Aligned_cols=83 Identities=17% Similarity=0.166 Sum_probs=61.3
Q ss_pred cchHHHHHHHHHHhcCC--CCceEeeccCCcchHHHHhh-cCCCCchh------hhhhhhhhhcccCCCCCceEEEeecc
Q 015888 49 GSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTEA------NRQAYRTLLVTAPGLGQYISGAILFE 119 (398)
Q Consensus 49 ~~~~~eL~~tA~~i~a~--gKGILA~DES~gT~~KRl~~-iGientee------nRr~yRelL~ttp~l~~~IsGvILfe 119 (398)
...++++...|+++..- |-.|.| |+++++.|+. -||+-+.- .|...-++| .+..|.-||-|.
T Consensus 20 D~dK~~~v~~ak~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-----~~geIdlVInt~ 90 (152)
T 1b93_A 20 DHCKQMLMSWVERHQPLLEQHVLYA----TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALI-----SEGKIDVLIFFW 90 (152)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSEEEE----ETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHH-----HTTCCCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHHhCceeEEEEecCCCCCchHHHHH-----HCCCccEEEEcC
Confidence 56789999999999998 888999 9999999999 99987542 344444554 246788999999
Q ss_pred c--ccccc-cCCCcchHHHHHhCCc
Q 015888 120 E--TLYQS-TTDGKKMVDVLVEQNI 141 (398)
Q Consensus 120 E--Tl~Q~-~~dG~~~~~~L~~kGI 141 (398)
+ + .|. ..||..+-..--..+|
T Consensus 91 ~pl~-~~~h~~D~~~IrR~A~~~~I 114 (152)
T 1b93_A 91 DPLN-AVPHDPDVKALLRLATVWNI 114 (152)
T ss_dssp CTTS-CCTTHHHHHHHHHHHHHTTC
T ss_pred Cccc-CCcccccHHHHHHHHHHcCC
Confidence 8 5 454 4566555544445554
No 15
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=42.12 E-value=33 Score=33.04 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhcCCCCceEeeccCCcchHHHHhhcCCCCchhhhhhhhhhhcccCCCCCceEEEeeccccccccc--CCC
Q 015888 52 ADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST--TDG 129 (398)
Q Consensus 52 ~~eL~~tA~~i~a~gKGILA~DES~gT~~KRl~~iGienteenRr~yRelL~ttp~l~~~IsGvILfeETl~Q~~--~dG 129 (398)
.+|....+++|+..-+-=+-+|=.+| || +.+.-.|.-|+++ .+ -+.||.|=|-+.-.+. .+|
T Consensus 67 ~~em~~~~~~I~r~~~~PviaD~d~G--------yg--~~~~~~~~v~~l~-~a-----Ga~gv~iED~~~pKrcgh~~g 130 (287)
T 3b8i_A 67 LSEFVEQATRIGRVARLPVIADADHG--------YG--NALNVMRTVVELE-RA-----GIAALTIEDTLLPAQFGRKST 130 (287)
T ss_dssp HHHHHHHHHHHHTTCSSCEEEECTTC--------SS--SHHHHHHHHHHHH-HH-----TCSEEEEECBCCSCCTTTCTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC--------CC--CHHHHHHHHHHHH-Hh-----CCeEEEEcCCCCccccCCCCC
Confidence 36777888888764443345565543 23 3333345555554 22 2667777666542111 123
Q ss_pred c-----chHHHH---HhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHH
Q 015888 130 K-----KMVDVL---VEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV 201 (398)
Q Consensus 130 ~-----~~~~~L---~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI 201 (398)
+ -+++.+ .+.++-|+++| .+-++ . ...|||.+.+|++.|.+.||+ .|-+...|+...+
T Consensus 131 kl~~~~e~~~~I~aa~~a~~~~~~~i------~aRtd-a-a~~gl~~ai~Ra~ay~eAGAd------~i~~e~~~~~~~~ 196 (287)
T 3b8i_A 131 DLICVEEGVGKIRAALEARVDPALTI------IARTN-A-ELIDVDAVIQRTLAYQEAGAD------GICLVGVRDFAHL 196 (287)
T ss_dssp CBCCHHHHHHHHHHHHHHCCSTTSEE------EEEEE-T-TTSCHHHHHHHHHHHHHTTCS------EEEEECCCSHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCCCCcEE------EEech-h-hhcCHHHHHHHHHHHHHcCCC------EEEecCCCCHHHH
Confidence 3 233433 46776444433 22121 2 346999999999999999998 3334445664322
Q ss_pred HHHHHHHHHHHHHHHHCCcceeecceecCCC
Q 015888 202 REAAWGLARYAAIAQDNGLVPIVEPEILLDG 232 (398)
Q Consensus 202 ~~na~~LArYAaicQ~~GLVPIVEPEVl~dG 232 (398)
.++|++-. +|++ |+..|
T Consensus 197 ----------~~i~~~~~-~P~i---i~~~g 213 (287)
T 3b8i_A 197 ----------EAIAEHLH-IPLM---LVTYG 213 (287)
T ss_dssp ----------HHHHTTCC-SCEE---EECTT
T ss_pred ----------HHHHHhCC-CCEE---EeCCC
Confidence 25667666 7988 55444
No 16
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=41.76 E-value=1.4e+02 Score=28.73 Aligned_cols=159 Identities=18% Similarity=0.178 Sum_probs=91.9
Q ss_pred ccccccchHHHHHHHHHHhcC-CCCceEeeccCCcch-------HHHHhh-cCCCCch------hhhhhhhhhhcccC--
Q 015888 44 LTIRAGSYADELVKTAKTVAS-PGRGILAMDESNATC-------GKRLAS-IGLENTE------ANRQAYRTLLVTAP-- 106 (398)
Q Consensus 44 ~~~~~~~~~~eL~~tA~~i~a-~gKGILA~DES~gT~-------~KRl~~-iGiente------enRr~yRelL~ttp-- 106 (398)
++++..+-.+.|.+++++|.. .-.+|-..|-.+|++ .+++.. +|++.-. .||.+.++.|...-
T Consensus 30 fPPk~~~~~~~l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~ 109 (304)
T 3fst_A 30 FPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNN 109 (304)
T ss_dssp CCCCSHHHHHHHHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHT
T ss_pred cCCCCccHHHHHHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHC
Confidence 344544455568889999986 346688888777763 345554 7887433 66767766665432
Q ss_pred CC-------CCceEEEeecccccccccCCCcchHHHHHhC-CceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhh
Q 015888 107 GL-------GQYISGAILFEETLYQSTTDGKKMVDVLVEQ-NIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQ 178 (398)
Q Consensus 107 ~l-------~~~IsGvILfeETl~Q~~~dG~~~~~~L~~k-GIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~ 178 (398)
|+ |+...|. + ....+...+++++++. +.-.|+ ...|. +.+ + .+.++...+|+++-.+
T Consensus 110 GI~nILaLrGDpp~~~---~----~~~~~A~dLv~~ir~~~~f~Igv----A~yPE-~Hp-~--a~~~~~d~~~Lk~Kvd 174 (304)
T 3fst_A 110 GIRHIVALRGDLPPGS---G----KPEMYASDLVTLLKEVADFDISV----AAYPE-VHP-E--AKSAQADLLNLKRKVD 174 (304)
T ss_dssp TCCEEEEECCCCC-------------CCCHHHHHHHHHHHCCCEEEE----EECTT-CCT-T--CSCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCC---C----CCCCCHHHHHHHHHHcCCCeEEE----EeCCC-cCC-C--CCCHHHHHHHHHHHHH
Confidence 22 3333321 1 1223445567777654 222222 23342 222 2 3457778889999889
Q ss_pred CCCCcceeeccccCCCCcCHHHHHHHHHHHHHHHHHHHHCCc-ceeecceecCC
Q 015888 179 QGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGL-VPIVEPEILLD 231 (398)
Q Consensus 179 ~GarFAKWRsVi~i~~~Ps~~aI~~na~~LArYAaicQ~~GL-VPIVEPEVl~d 231 (398)
.||.|.==..++ + ...+-||...|.+.|+ |||+ |-|++=
T Consensus 175 AGAdf~iTQ~ff--D-----------~~~~~~f~~~~r~~Gi~vPIi-~GImPi 214 (304)
T 3fst_A 175 AGANRAITQFFF--D-----------VESYLRFRDRCVSAGIDVEII-PGILPV 214 (304)
T ss_dssp HTCCEEEECCCS--C-----------HHHHHHHHHHHHHTTCCSCEE-CEECCC
T ss_pred cCCCEEEeCccC--C-----------HHHHHHHHHHHHhcCCCCcEE-EEeccc
Confidence 999993222221 1 3455678889999997 7765 777643
No 17
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=31.39 E-value=2.6e+02 Score=25.85 Aligned_cols=144 Identities=19% Similarity=0.173 Sum_probs=77.1
Q ss_pred chhHHHHHHHHhhCCCCcceeeccccCCC--CcCHHHHHHHHHHHHHHHHHHHHCCcce-eecceecCCCCCchhHHHHH
Q 015888 166 LDGLASRTAAYYQQGARFAKWRTVVSIPN--GPSALAVREAAWGLARYAAIAQDNGLVP-IVEPEILLDGDHGIDRTFEV 242 (398)
Q Consensus 166 LDgL~~R~~~y~~~GarFAKWRsVi~i~~--~Ps~~aI~~na~~LArYAaicQ~~GLVP-IVEPEVl~dG~h~i~~~~~v 242 (398)
.+--...+.+ .+.||.-=-+ |+.+.. ..-.. ....++++....|... .+| |+|.-.|- +..+.+
T Consensus 66 ~~~k~~E~~~-i~~GAdEID~--Vinig~~~~g~~~---~v~~ei~~v~~a~~~~-~lKvIlEt~~Lt--~eei~~---- 132 (226)
T 1vcv_A 66 TASRIALVSR-LAEVADEIDV--VAPIGLVKSRRWA---EVRRDLISVVGAAGGR-VVKVITEEPYLR--DEERYT---- 132 (226)
T ss_dssp HHHHHHHHHH-HTTTCSEEEE--ECCHHHHHTTCHH---HHHHHHHHHHHHTTTS-EEEEECCGGGCC--HHHHHH----
T ss_pred hHHHHHHHHH-HHCCCCEEEE--ecchhhhcCCCHH---HHHHHHHHHHHHHcCC-CceEEEeccCCC--HHHHHH----
Confidence 4445556666 7788765433 444420 11122 2344566555667544 788 99988872 221222
Q ss_pred HHHHHHHHHHHHhhCCccccccccccc--cCC----CCCccCCcCChHHHHHHHHHHhhhc---CCCCCceeeecCCCC-
Q 015888 243 AQKVWAEVFFYLAENNVMFEGILLKPS--MVT----PGAECKEKATPQQVAEYTLKLLHRR---IPPAVPGIMFLSGGQ- 312 (398)
Q Consensus 243 te~vl~~v~~~L~~~~V~leG~lLKpn--MV~----pG~~~~~~~s~~eVA~~T~~~l~rt---vPpaVpgIvFLSGGq- 312 (398)
..+...+.|.++ +|.| ... -+...+.-+|+++| ++++++ +++.+ ||-. |||-
T Consensus 133 -------a~~ia~eaGADf----VKTSTGf~~~~~~~~~~~~~gAt~~dv-----~lm~~~i~~~g~~v-~vKa-aGGir 194 (226)
T 1vcv_A 133 -------LYDIIAEAGAHF----IKSSTGFAEEAYAARQGNPVHSTPERA-----AAIARYIKEKGYRL-GVKM-AGGIR 194 (226)
T ss_dssp -------HHHHHHHHTCSE----EECCCSCCCHHHHHHTTCCSSCCHHHH-----HHHHHHHHHHTCCC-EEEE-ESSCC
T ss_pred -------HHHHHHHcCCCE----EEeCCCCCccccccccCCCCCCCHHHH-----HHHHHHHHHhCCCc-eEEE-eCCCC
Confidence 122223456665 7988 420 00000234677877 345555 77776 7765 6775
Q ss_pred ChHHHHHHhhhhhCCCC--CceeEEeehhh
Q 015888 313 SEVEATLNLNAMNQGPN--PWHVSFSYARA 340 (398)
Q Consensus 313 SeeeAt~~LnAiN~~~~--PW~lsFSfgRA 340 (398)
+.++|-..+.++..+.. -..+..|.+.+
T Consensus 195 t~~~al~~i~a~~~Ga~~~~fRiGtS~~~~ 224 (226)
T 1vcv_A 195 TREQAKAIVDAIGWGEDPARVRLGTSTPEA 224 (226)
T ss_dssp SHHHHHHHHHHHCSCSCTTTEEEEESCGGG
T ss_pred CHHHHHHHHHHHHCCCCcCCceEecCchhh
Confidence 58899999988643222 23455555443
No 18
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=30.83 E-value=3.1e+02 Score=25.07 Aligned_cols=164 Identities=13% Similarity=0.109 Sum_probs=91.2
Q ss_pred CceEEEeecccccccccCCCcchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHH--HHHHHH-hhCCCCccee
Q 015888 110 QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLA--SRTAAY-YQQGARFAKW 186 (398)
Q Consensus 110 ~~IsGvILfeETl~Q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~--~R~~~y-~~~GarFAKW 186 (398)
..+-|+|++.-... .+..+.|.+.| +|-|=+|..... . ....+-+.|+-. ..+.+| .+.|.
T Consensus 121 ~~vdgiI~~~~~~~------~~~~~~l~~~~-iPvV~i~~~~~~---~-~~~~~V~~D~~~~~~~a~~~L~~~G~----- 184 (348)
T 3bil_A 121 HGVDGIICVPNEEC------ANQLEDLQKQG-MPVVLVDRELPG---D-STIPTATSNPQPGIAAAVELLAHNNA----- 184 (348)
T ss_dssp TTCSCEEECCCGGG------HHHHHHHHHC--CCEEEESSCCSC---C--CCCEEEEECHHHHHHHHHHHHHTTC-----
T ss_pred CCCCEEEEeCCCCC------hHHHHHHHhCC-CCEEEEcccCCC---C-CCCCEEEeChHHHHHHHHHHHHHCCC-----
Confidence 45788898753321 14566777777 477777764321 0 112233444432 233333 45664
Q ss_pred eccccCCCCcCHHHHHHHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHH---------------HHH
Q 015888 187 RTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWA---------------EVF 251 (398)
Q Consensus 187 RsVi~i~~~Ps~~aI~~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~---------------~v~ 251 (398)
|.+.-+.+.+.... ...-+.-|-..++++|+ +|++...++.+.+...+.++++|. .++
T Consensus 185 ~~I~~i~~~~~~~~---~~~R~~Gf~~al~~~g~----~~~~v~~~~~~~~~~~~~~~~ll~~~~~ai~~~nD~~A~g~~ 257 (348)
T 3bil_A 185 LPIGYLSGPMDTST---GRERLEDFKAACANSKI----GEQLVFLGGYEQSVGFEGATKLLDQGAKTLFAGDSMMTIGVI 257 (348)
T ss_dssp CSEEEECCCTTSHH---HHHHHHHHHHHHHHTTC----CCCEEECCCSSHHHHHHHHHHHHHTTCSEEEESSHHHHHHHH
T ss_pred CeEEEEeCCCCCcc---HHHHHHHHHHHHHHcCc----CccEEEcCCCCHHHHHHHHHHHHcCCCCEEEEcChHHHHHHH
Confidence 44444443332221 12334456678899997 566666788888877777777765 367
Q ss_pred HHHhhCCccccc---------cccccccCCCCCccCCcCChHHHHHHHHHHhhhcC
Q 015888 252 FYLAENNVMFEG---------ILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRI 298 (398)
Q Consensus 252 ~~L~~~~V~leG---------~lLKpnMV~pG~~~~~~~s~~eVA~~T~~~l~rtv 298 (398)
++|.++|+..++ +-+ ..+..|.. .+-...+++++...+++|.+.+
T Consensus 258 ~al~~~G~~vP~disvvG~D~~~~-~~~~~p~l-ttv~~~~~~~g~~Av~~l~~~i 311 (348)
T 3bil_A 258 EACHKAGLVIGKDVSVIGFDTHPL-FALQPHPL-TVIDQNVEQLAQRAVSILTELI 311 (348)
T ss_dssp HHHHHTTCCBTTTBEEEEESCCGG-GGGSSSCC-CEEECCHHHHHHHHHHHHHCC-
T ss_pred HHHHHcCCCCCCCeEEEEeCCcHH-HHhcCCCc-eEEEcCHHHHHHHHHHHHHHHh
Confidence 888888865432 111 12333433 2334567888888888887543
No 19
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=23.38 E-value=1.4e+02 Score=28.93 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=63.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCCccccccccccccCCCCC
Q 015888 196 PSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGA 275 (398)
Q Consensus 196 Ps~~aI~~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~V~leG~lLKpnMV~pG~ 275 (398)
=+..+|..-...|.+|+.+|++.|.- +|.+=+.--+ |-+.=.+.++..|.+.+ |+. +. |++|
T Consensus 63 ls~eai~r~~~aL~~f~~~~~~~~v~-----~v~~vATsA~-R~A~N~~~fl~~v~~~t---Gi~-------ie-VIsG- 124 (343)
T 3cer_A 63 FADEALERAYVAAREFAGVIAEHPID-----GLRFVATSAT-RDAENREEFEDEIERIL---GVR-------PE-VIPG- 124 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSCCS-----EEEEEECHHH-HHCTTHHHHHHHHHHHH---SSC-------CE-ECCH-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCC-----eEEEEecHHH-HcCcCHHHHHHHHHHHH---CCC-------EE-EeCH-
Confidence 47889999999999999999999863 3444433322 11111233455555554 443 22 3444
Q ss_pred ccCCcCChHHHHHHHHHHhhhcCCC---CCceeeecCCCCChHHH
Q 015888 276 ECKEKATPQQVAEYTLKLLHRRIPP---AVPGIMFLSGGQSEVEA 317 (398)
Q Consensus 276 ~~~~~~s~~eVA~~T~~~l~rtvPp---aVpgIvFLSGGqSeeeA 317 (398)
+|.|.++.......+|. .-+++++=-||-|-|-+
T Consensus 125 --------~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~ 161 (343)
T 3cer_A 125 --------TEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELV 161 (343)
T ss_dssp --------HHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEE
T ss_pred --------HHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEE
Confidence 78899888888888875 45788887888777544
No 20
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=23.00 E-value=79 Score=30.89 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCCchhHHHHHHHHhhCCCCcceeeccccCCCCcCHHHHHHHHHHHHHHHHHHHHCCcceee
Q 015888 163 CQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIV 224 (398)
Q Consensus 163 t~GLDgL~~R~~~y~~~GarFAKWRsVi~i~~~Ps~~aI~~na~~LArYAaicQ~~GLVPIV 224 (398)
..|||.+.+|+..|.+.||+ .|-+...|+...+. ++|++-. +|++
T Consensus 185 ~~gl~~ai~Ra~Ay~eAGAd------~i~~e~~~~~e~~~----------~i~~~l~-~P~l 229 (318)
T 1zlp_A 185 PHGLEEGIRRANLYKEAGAD------ATFVEAPANVDELK----------EVSAKTK-GLRI 229 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCS------EEEECCCCSHHHHH----------HHHHHSC-SEEE
T ss_pred hcCHHHHHHHHHHHHHcCCC------EEEEcCCCCHHHHH----------HHHHhcC-CCEE
Confidence 35899999999999999987 34445557643222 4666665 7874
No 21
>3nw0_B Melanoma-associated antigen G1; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=22.51 E-value=1.2e+02 Score=27.94 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=64.9
Q ss_pred CcCHHHHHHHHHHHHHHHHHHHHCCcceeecceec--CCCCCchhHHHHHHHHHHHHHHHHHhh-CCccc-----cc--c
Q 015888 195 GPSALAVREAAWGLARYAAIAQDNGLVPIVEPEIL--LDGDHGIDRTFEVAQKVWAEVFFYLAE-NNVMF-----EG--I 264 (398)
Q Consensus 195 ~Ps~~aI~~na~~LArYAaicQ~~GLVPIVEPEVl--~dG~h~i~~~~~vte~vl~~v~~~L~~-~~V~l-----eG--~ 264 (398)
.++...+...+..|.||+-.+.... .||-.-|++ +.++|+ +.. ..|+...-+.|.. -|+.| .+ -
T Consensus 2 ~~~~~~l~~kv~~LVrflL~k~~~k-~pI~r~emlk~V~~~y~-~~F----~~I~~~A~e~L~~vFG~elkEvd~~~~~Y 75 (217)
T 3nw0_B 2 PRSQKQLELKVSELVQFLLIKDQKK-IPIKRADILKHVIGDYK-DIF----PDLFKRAAERLQYVFGYKLVELEPKSNTY 75 (217)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHT-CCEEHHHHHHHTTGGGG-GGH----HHHHHHHHHHHHHHHCEEEEESSTTCSEE
T ss_pred CCcccHHHHHHHHHHHHHHHHhhCC-CCccHHHHHHHHhHHhh-HHH----HHHHHHHHHHHHHHcCeEEEEecCCCceE
Confidence 3567778899999999998887775 899999986 444443 122 2223333333332 12211 11 1
Q ss_pred ccccccCCCCCccCCcCCh-HHHHHHHHHHhhhcCCCCCceeeecCCCC-ChHHHHHHhhhhhC
Q 015888 265 LLKPSMVTPGAECKEKATP-QQVAEYTLKLLHRRIPPAVPGIMFLSGGQ-SEVEATLNLNAMNQ 326 (398)
Q Consensus 265 lLKpnMV~pG~~~~~~~s~-~eVA~~T~~~l~rtvPpaVpgIvFLSGGq-SeeeAt~~LnAiN~ 326 (398)
+|-+.+- | ..+....+. ...+...+-.+ |.|+.|++|+. ||++--..|+.|+-
T Consensus 76 iLv~~L~-p-l~~~~~l~~~~~~pk~GLL~~-------IL~~Ifm~Gn~~~Ee~lw~~L~~lgv 130 (217)
T 3nw0_B 76 ILINTLE-P-VEEDAEMRGDQGTPTTGLLMI-------VLGLIFMKGNTLKETEAWDFLRRLGV 130 (217)
T ss_dssp EEEECSC-C-CC----CCC-CCCHHHHHHHH-------HHHHHHHTTTCBCHHHHHHHHHHC-C
T ss_pred EEEECCC-c-cccCCccCCcccccchhHHHH-------HHHHHHhcCCCCCHHHHHHHHHhcCC
Confidence 2333331 0 011111111 22333333332 36999999998 88899999999885
No 22
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.88 E-value=1.8e+02 Score=25.09 Aligned_cols=34 Identities=26% Similarity=0.171 Sum_probs=27.1
Q ss_pred CChHHHHHHHHHHhhhcCCCCCceeeecCCCCCh
Q 015888 281 ATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSE 314 (398)
Q Consensus 281 ~s~~eVA~~T~~~l~rtvPpaVpgIvFLSGGqSe 314 (398)
.+|+|||+.-+.++...-...+..+....||++.
T Consensus 200 ~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~~ 233 (235)
T 3l77_A 200 LKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQRP 233 (235)
T ss_dssp BCHHHHHHHHHHHHTSCTTCCCCEEEECCTTSCC
T ss_pred CCHHHHHHHHHHHHcCCCCCccceEEEeecccCC
Confidence 5899999999999986555557778888888764
No 23
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=21.05 E-value=1.4e+02 Score=26.55 Aligned_cols=54 Identities=7% Similarity=-0.061 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHCCcceeecceecCCCCCchhHHHHHHHHHHHHHHHHHhhCC
Q 015888 201 VREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENN 258 (398)
Q Consensus 201 I~~na~~LArYAaicQ~~GLVPIVEPEVl~dG~h~i~~~~~vte~vl~~v~~~L~~~~ 258 (398)
..+++..++ ...++.|.+|+ +=++..+|.|+...-.......|.-+++.|+.|+
T Consensus 224 ~~~~~~~~~---~~L~~~g~~~~-~~~~~~~g~H~~~~w~~~l~~~l~~~~~~~~~~~ 277 (280)
T 1r88_A 224 AMGNSRMFY---NQYRSVGGHNG-HFDFPASGDNGWGSWAPQLGAMSGDIVGAIRHHH 277 (280)
T ss_dssp HHHHHHHHH---HHHHHTTCCSE-EEECCSSCCSSHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHH---HHHHHCCCcce-EEEecCCCCcChhHHHHHHHHHHHHHHHHHhhhc
Confidence 345555554 56678884443 3344468999988777777888999999998765
No 24
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=20.81 E-value=1.2e+02 Score=28.99 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=44.0
Q ss_pred CC-cchHHHHHhCCceeeEecCCCcccCCCCCCCCCCCCchhHHHHHHHHhhCCCCcceeecc
Q 015888 128 DG-KKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTV 189 (398)
Q Consensus 128 dG-~~~~~~L~~kGIvPGIKVDkGl~pl~g~~~E~~t~GLDgL~~R~~~y~~~GarFAKWRsV 189 (398)
+| ++++|++.++|+-+||=.|-|.....|.++. .++-...-++.|.+-|..|=|+-..
T Consensus 83 ~G~k~ladyih~~Glk~Giy~~~~~~~c~g~~~~----~~~~~~~da~~~a~wGvdylK~D~~ 141 (400)
T 4do4_A 83 HGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGT----TLDKVVQDAQTFAEWKVDMLKLDGC 141 (400)
T ss_dssp TCHHHHHHHHHHTTCEEEEEEEBSSBCTTSCBCB----CGGGHHHHHHHHHHTTCCEEEEECT
T ss_pred cccHHHHHHHHHCCceEEEecCCCCcccCCCCch----hHhHHHHHHHHHHHhCCceEeeccC
Confidence 44 5789999999999999999998876665431 2455555677888899999887644
Done!