BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015890
(398 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 184/377 (48%), Gaps = 22/377 (5%)
Query: 21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
++ ++ G K+ +SL G + P+ E KE + D ++ YG + GL ELR+A+ +K
Sbjct: 17 KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 75
Query: 81 LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
L ++N + K+ +MV GANQAF+ + G+ V++ P + + + + G
Sbjct: 76 LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ V + D L+K + K +++ +P NP+G + ++ L+ I+D
Sbjct: 136 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
++ D Y F+YD +H + + + + FSK + M GWR+G++A PS +
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251
Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 308
+++K Q C Q+ A +L+ W V E K+ R R+++ + L+ +G
Sbjct: 252 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310
Query: 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 366
VK +GA Y++ R+ + L + + V V+PG A G G++RIS+
Sbjct: 311 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 369
Query: 367 EDDCKAAADRLRRGLEE 383
E + A DR+ R L+E
Sbjct: 370 E-KLEEAMDRMERVLKE 385
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 22/377 (5%)
Query: 21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
++ ++ G K+ +SL G + P+ E KE + D ++ YG + GL ELR+A+ +K
Sbjct: 16 KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 74
Query: 81 LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
L ++N + K+ +MV GANQAF+ + G+ V++ P + + + + G
Sbjct: 75 LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 134
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ V + D L+K + K +++ +P NP+G + ++ L+ I+D
Sbjct: 135 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
++ D Y F+YD +H + + + + FSK + M GWR+G++A PS +
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 250
Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 308
+++K Q C Q+ A +L+ W V E K+ R R+++ + L+ +G
Sbjct: 251 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 309
Query: 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 366
VK +GA Y++ R+ + L + + V V+PG A G G++RIS+
Sbjct: 310 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 368
Query: 367 EDDCKAAADRLRRGLEE 383
E + A +R+ R L+E
Sbjct: 369 E-KLEEAMERMERVLKE 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 14/380 (3%)
Query: 10 RALETEMPIMVQIQ--ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
+A++ + P+ V + EL R + V+L G + P+ E + + +KY
Sbjct: 9 QAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPP 67
Query: 68 EGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
G+PELR+AL +K +EN L +VT G +QA N+ + D GD V++ +PY+ +
Sbjct: 68 AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVS 127
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
+ G + V + PD + + + + P K + V +P NP+G P+ +
Sbjct: 128 YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEV 185
Query: 186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGY 241
L+ ++ L +LV D Y +Y+G V +H + + +KA+ M GWR+GY
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301
P EV + + P + + AL + + +V + R R+++ E
Sbjct: 246 ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305
Query: 302 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 361
L+ LG AV+ GA Y+ D+ L GV V+PG GH+R+S
Sbjct: 306 GLTALGLKAVRPS-GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLS 363
Query: 362 FGGLVEDDCKAAADRLRRGL 381
+ E++ + A +R R L
Sbjct: 364 Y-ATSEENLRKALERFARVL 382
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 22/380 (5%)
Query: 6 KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
++++ + M + + + L++ ++ ++L G + P+ +E+ + + KY
Sbjct: 17 RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 75
Query: 66 ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
G+ ELR+ + K++ + K + V+VT GA QA N + L D GD V++F+P +
Sbjct: 76 DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 135
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
+ + G T +V SK P + +E L K K V + +P NP+G
Sbjct: 136 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 193
Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 237
L+ + L K +++ D Y +Y + EG D +V + FSK++ M GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
RVGY+ +V AT + K+Q + C + ++Q+ AL +L+ ++ + K+ +
Sbjct: 254 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 307
Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
+ E L +G V+ EGA YL+ ++ DD + L V ++PG A G
Sbjct: 308 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 363
Query: 358 LRISFGGLVEDDCKAAADRL 377
+R+SF +E A DR+
Sbjct: 364 VRLSFATSIE-RLTEALDRI 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 12/364 (3%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
D Y +Y+G V +H + + +KA+ M GWR+GY P EV + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317
P + + AL + + +V + R R+++ E L+ LG AV+ GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377
Y+ D+ L GV V+PG GH+R+S+ E++ + A +R
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 378 RRGL 381
R L
Sbjct: 379 ARVL 382
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 12/364 (3%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
D Y +Y+G V +H + + +KA+ M GWR+GY P EV + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317
P + + AL + + +V + R R+++ E L+ LG AV+ GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377
Y+ D+ L GV V+PG GH+R+S+ E++ + A +R
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 378 RRGL 381
R L
Sbjct: 379 ARVL 382
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
D Y +Y+G V +H + + +KA+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
D Y +Y+G V +H + + +KA+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 162/367 (44%), Gaps = 18/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
D Y +Y+G V +H + + + A+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 32/397 (8%)
Query: 6 KLAKRALETEMPIMVQIQELVRGAKNA-----VSLAQGVVYWQPPKMAMEKVKELVWDPS 60
KLA R +E+ P M I + A A S + G + PK +E K + +
Sbjct: 2 KLAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQG 59
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
++YG G P LR+A+ +KL ++N L +++VT G Q+ N++L + + GD V++
Sbjct: 60 KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVII 119
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
AP++ + ++ T +++ + + + + P KL+ P NP+G
Sbjct: 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTG 177
Query: 179 -TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLFSFS 229
Y P+ + + I+ + AG W++ D Y +YD +H + + V F+
Sbjct: 178 MVYTPDEV-RAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
K Y M GWRVG++A P + AT K+Q + +Q+ A+ + + + V E +
Sbjct: 237 KTYAMTGWRVGFLAGPVPLVKAAT---KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEML 293
Query: 290 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
R + +AL+ + +GA Y++ + + + L +H V +PG
Sbjct: 294 AAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPG 353
Query: 350 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
A G +R+S+ + D ++RG+E L K
Sbjct: 354 AAFGADDCIRLSYATDL--------DTIKRGMERLEK 382
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 60/419 (14%)
Query: 6 KLAKRALETEMPI---MVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
+ +KRAL E I ++ +EL + + L G +QPP+ E + + +
Sbjct: 11 RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE- 69
Query: 60 SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
+ YG EGLPELR A+V++ ++N + V VTA +A I L D GD ++
Sbjct: 70 GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 129
Query: 118 MFAPYYFNSYMSFQMTGVTHILVG-PCSSKTL-----HPDADWLEKTLETKPTPKLVSVV 171
+ P SY + TG+ G P +T+ PD D + K + + K ++V+
Sbjct: 130 VPGP----SYPPY--TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR--TKAIAVI 181
Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDH---------- 221
NP NP+G ++ L+ I ++ ++ D Y + EG+H
Sbjct: 182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL------MTYEGEHISPGSLTKDV 235
Query: 222 -VVNLFSFSKAYGMMGWRVGYIAYP------SEVEGFATQLLKVQDNIPICASIISQHLA 274
V+ + SK Y GWR+GY+ + SEV +L +++ +C + +Q A
Sbjct: 236 PVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR----LCPNTPAQFAA 291
Query: 275 LYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLD 330
+ L TGP +++ E +K L R+ I + L+ + + +GA Y++ ++ P K +
Sbjct: 292 IAGL-TGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWK--N 348
Query: 331 DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
D E V + H V+ + G G GH R F +E + A DR + ++E +K+
Sbjct: 349 DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 36/384 (9%)
Query: 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86
R ++ + L+ G P +EK+ + Y G+P LR A+
Sbjct: 34 RRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYD 93
Query: 87 LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
+ +S +VT G+ + +++L D GD++++ P Y + G I
Sbjct: 94 VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSY-----PIHIYGAV-IAGAQV 147
Query: 144 SSKTLHPDADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
S L P D+ LE+ + E+ P P+++ + P NP+ + +R+ L K
Sbjct: 148 RSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVM 207
Query: 200 LVVDNTY--FMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252
+V D Y +YDG K + D V F+ SK+Y M GWR+G++ E+
Sbjct: 208 VVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL---V 264
Query: 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
+ L +++ Q A+ +L+ + V + + + R+++ + L G V+
Sbjct: 265 SALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-WMVE 323
Query: 313 GGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 370
+ ++Y+WA++PE HL E + L V V PG G G + F L+E+
Sbjct: 324 NPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF-ALIEN-- 380
Query: 371 KAAADRLR---RGLEELVK-DGMV 390
DRLR RG++ + + DG++
Sbjct: 381 ---RDRLRQAVRGIKAMFRADGLL 401
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 173/395 (43%), Gaps = 48/395 (12%)
Query: 7 LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK-MAMEKVKELVWDPSI 61
L+KR L E M I+ Q+L K + L G + PK + E +K L
Sbjct: 2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSL--KEGK 59
Query: 62 SKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+ Y G+ ELR+ + + + K + ++++T G++ + ++ D GD V++
Sbjct: 60 THYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQ 119
Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGN 175
P Y + +++ F +K + D + LE+ L K K + + +P N
Sbjct: 120 NPCYPCYKNFIRF------------LGAKPVFCDFTVESLEEALSDKT--KAIIINSPSN 165
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDH----VVNLFSFS 229
P G I + I + +++ D Y +Y+G+ + +E D + + FS
Sbjct: 166 PLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFS 221
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW-VTER 288
Y M GWR+GY+ E+ +LK+Q N+ I A ISQ+ AL + + E +
Sbjct: 222 XLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAFEKETEREINSM 278
Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
+K+ R R ++ + + G V GA Y++ + E D E L V + P
Sbjct: 279 IKEFDRRRRLVLKYVKDFG-WEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFVALTP 334
Query: 349 GGACGCRG--HLRISFGGLVEDDCKAAADRLRRGL 381
G G +G ++RIS+ E + K +R++ L
Sbjct: 335 GIGFGSKGKNYIRISYANSYE-NIKEGLERIKEFL 368
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 154/380 (40%), Gaps = 31/380 (8%)
Query: 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
I Q+ L + A++L+QG + P+ E++ V ++Y G+ LR+A+
Sbjct: 19 IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQ-GANQYAPMTGVQALREAI 76
Query: 78 VKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
+K +LY S + VTAGA +A + L GD V+ F P Y + +
Sbjct: 77 AQK---TERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIA 133
Query: 132 MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
++G +V + + H DW E +LV + P NPS T + +
Sbjct: 134 LSGG---IVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190
Query: 192 LCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAY 244
+++ D Y + + H V + V + SF K Y M GW+VGY
Sbjct: 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
P+ + + ++ KV + + +Q L+ PE + R+I+ AL+
Sbjct: 251 PAPI---SAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALN 307
Query: 305 PLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG---CRGHLR 359
+ EG +L LDD E +WL HGV IP C +R
Sbjct: 308 E-SRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366
Query: 360 ISFGGLVEDDCKAAADRLRR 379
+ F E AAA+RLR+
Sbjct: 367 LCFAK-KESTLLAAAERLRQ 385
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 42/362 (11%)
Query: 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLN 82
+ G +N + G P++ + +KELV D ++ Y + +G E R A+ + LN
Sbjct: 31 IVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLN 90
Query: 83 QENKLY--KSSVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG 134
+ + ++ T GA + L++C DA D + APY F Y F
Sbjct: 91 NTHGTHFNADNLYXTXGAAAS-----LSICFRALTSDAYDEFITIAPY-FPEYKVFVNAA 144
Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
++ P ++ D D LE+ + + V + +P NPSGT E +K++SDL +
Sbjct: 145 GARLVEVPADTEHFQIDFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLE 202
Query: 195 AAGS------WLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAY 244
+++ D Y +YDG K V D+ + +S+SK+ + G R+GY+
Sbjct: 203 KKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262
Query: 245 PSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300
P EV E +A + +CA + Q + + T + NR+++
Sbjct: 263 PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKC-----QGATGDINAYKENRDLLY 317
Query: 301 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 360
E L+ +G K +GA Y + + E DD A V+++ GC G +RI
Sbjct: 318 EGLTRIGYHCFK-PDGAFYXFVKALE---DDSNAFCEKAKEEDVLIVAADGFGCPGWVRI 373
Query: 361 SF 362
S+
Sbjct: 374 SY 375
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS 90
AV+L QG PP +E V+ + +Y GLP LR+AL ++ E +
Sbjct: 26 GAVNLGQGFPSNPPPPFLLEAVRRALG--RQDQYAPPAGLPALREALAEEFAVEPE---- 79
Query: 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTL 148
SV+VT+GA +A ++ +L GD VV+ P +F+ Y+ +F ++ + +
Sbjct: 80 SVVVTSGATEALYVLLQSLVGPGDEVVVLEP-FFDVYLPDAFLAGAKARLVRLDLTPEGF 138
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206
D LEK L P + + + P NP+G ER L+ I+ L +A +L+ D Y
Sbjct: 139 RLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE 196
Query: 207 FMYDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
Y R E + + S K G+RVG+I P E
Sbjct: 197 LYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE 239
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 163/395 (41%), Gaps = 51/395 (12%)
Query: 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL 87
+ ++L QG + PP+ A+++ ++ + P +++Y G P L ++L+K + +L
Sbjct: 57 RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTEL 116
Query: 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGP--- 142
+V VT GAN+ ++ ++ L +AGD V++F P++ + ++ G V ++ + P
Sbjct: 117 KAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKE 176
Query: 143 -----CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ D + EK + +K K V + P NP G L + ++C
Sbjct: 177 LDQRNTRGEEWTIDFEQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 198 SWLVVDNTY---FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVE 249
++ D Y + D G + + S ++ GWR+G++ + +E+
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELL 294
Query: 250 GFATQL---LKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
+A + + P+ CA+ I+ L + + + ++ + +I
Sbjct: 295 SYAAKAHTRICFASPSPLQEACANSINDALKI-------GYFEKMRQEYINKFKIFTSIF 347
Query: 304 SPLGEGAVKGGEGAIYLWARL-----------PEKHLD---DFEVVRWLAHRHGVVVIPG 349
LG EG ++ PE+ L+ DF + WL + GVV IP
Sbjct: 348 DELG-LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406
Query: 350 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
+ H + + L CK A L +E L
Sbjct: 407 TEFYIKEHEKAAENLLRFAVCKDDA-YLENAVERL 440
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 143/351 (40%), Gaps = 42/351 (11%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA--- 120
YG ++G LR A+ + ++ + + V V+ GA + L L G +V +
Sbjct: 108 YGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL---GSNVTIAVQDP 164
Query: 121 --PYYFNSYMSFQMTGVTH--------ILVGPCS-SKTLHPDADWLEKTLETKPTPKLVS 169
P Y +S + TG H ++ PC + + PD L P ++
Sbjct: 165 TFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPD-------LAMTPRTDVIF 217
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVV 223
+P NP+G + L ++ D K GS ++ D+ Y F+ DG E + +
Sbjct: 218 FCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAI 277
Query: 224 NLFSFSKAYGMMGWRVGYIAYPSEV---EGFA--TQLLKVQDNIPICASIISQHLALYSL 278
+ SFSK G G R+G+ P E+ GF ++ AS I+Q L L
Sbjct: 278 EVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACL 337
Query: 279 QTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 337
+G V + + NR+I+ + L LG V GG A YLW K ++V
Sbjct: 338 SSGGLKEIRSVNNYYKENRKILMDTLVSLGL-KVYGGVNAPYLWVHF--KGSKSWDVFNE 394
Query: 338 LAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCKAAADRLRRGLEELVK 386
+ ++ +PG G G +LRIS G D A+ RL+ K
Sbjct: 395 ILENTHIITVPGSGFGPGGEEYLRISGFGR-RDHIVEASKRLQNFFNTRTK 444
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 165/413 (39%), Gaps = 41/413 (9%)
Query: 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
AKR + + V+ +L + V+L QG PP E++ + + ++++Y
Sbjct: 2 AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68 EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
G P L AL K+ Q ++V GA + N + L D GD V++ P+Y
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
+M G + + P SK +DW + LE+K + K +++ P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFS 229
G + L+ I+DLC + + D Y +Y G H + + + + S
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 283
K + + GW++G+ P+ + L VQ N P+ A++ PE
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 284 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 333
+ K+L R+ + L+ +G + GG I L A L + + D D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
V+W+ + IP A C + F LV C D EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 40/336 (11%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
YG D GLP LR L + + + + ++ GA + L+ +V + P Y
Sbjct: 71 YGPDFGLPALRQKLSEDFYR-GFVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY 128
Query: 124 FNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
+Y+ ++TG I+ PC L +A + E +T ++ + +P NP+GT +
Sbjct: 129 -PAYLDIARLTGAKEIIALPC----LQENAFFPEFPEDTHI--DILCLCSPNNPTGTVLN 181
Query: 183 ERLLKRISD---------LCKAAGSWLVVD----NTYFMYDGRKHCCVEGDHVVNLFSFS 229
+ L+ I L AA S + D + F + C +E +N SFS
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE----IN--SFS 235
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------NIPICASIISQHLALYSLQTGPE 283
K G G R+G+ P E+ +A +QD ASI +Q + L P+
Sbjct: 236 KPLGFAGIRLGWTVIPQELT-YADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQ 294
Query: 284 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343
E + N +++R+AL G V GGE A YLW + + ++ D ++ + +
Sbjct: 295 L--EAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYH 351
Query: 344 VVVIPGGACGCRGHLRISFGGL-VEDDCKAAADRLR 378
+ + PG G G + F L +D AA +RL+
Sbjct: 352 IAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 164/413 (39%), Gaps = 41/413 (9%)
Query: 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
AKR + + V+ +L + V+L QG PP E++ + + ++++Y
Sbjct: 2 AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68 EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
G P L AL K+ Q ++V GA + N + L D GD V++ P+Y
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
+M G + + P SK +DW + LE+K + K +++ P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFS 229
G + L+ I+DLC + + D Y +Y G H + + + + S
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 283
+ + GW++G+ P+ + L VQ N P+ A++ PE
Sbjct: 240 XTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 284 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 333
+ K+L R+ + L+ +G + GG I L A L + + D D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
V+W+ + IP A C + F LV C D EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
+K+ALE + ++ +LV + + +SLA G+ P E +++++ +
Sbjct: 54 FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 110
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+YG +G LR+ L+K L + + + + +M+T+G+ QA I + GD VV+
Sbjct: 111 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 170
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
AP Y + +F +I + P + + + LE+ L E K K V VV
Sbjct: 171 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 227
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSF 228
NP+G + E K + +L +V D+ Y Y G ++ V+ L +F
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 286
SK G+R+G++ G ++ + + +C ++ Q +A + G + +
Sbjct: 288 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 343
Query: 287 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344
E K R+ + EAL VK EG +++W LP+ +D +++ A + GV
Sbjct: 344 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 401
Query: 345 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
+PG A + +R++F + ED RL ++E +K
Sbjct: 402 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
+K+ALE + ++ +LV + + +SLA G+ P E +++++ +
Sbjct: 9 FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 65
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+YG +G LR+ L+K L + + + + +M+T+G+ QA I + GD VV+
Sbjct: 66 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 125
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
AP Y + +F +I + P + + + LE+ L E K K V VV
Sbjct: 126 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 182
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSF 228
NP+G + E K + +L +V D+ Y Y G ++ V+ L +F
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 286
SK G+R+G++ G ++ + + +C ++ Q +A + G + +
Sbjct: 243 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 298
Query: 287 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344
E K R+ + EAL VK EG +++W LP+ +D +++ A + GV
Sbjct: 299 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 356
Query: 345 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
+PG A + +R++F + ED RL ++E +K
Sbjct: 357 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 36/353 (10%)
Query: 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQAF 102
P+ A+E + + + ++ Y GLP LR + + + L V++T G++ F
Sbjct: 46 PRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLET 161
+ L D+GD V + AP Y + + G+ + + L P AD+ L
Sbjct: 105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAG 164
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE- 218
+ V +P NP+GT + + + +A G+ + D Y Y+ + +E
Sbjct: 165 ------LXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL 218
Query: 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278
D + SFSK + GWRVG+ P E + ++ N ICA SQ AL +L
Sbjct: 219 TDECYVINSFSKYFSXTGWRVGWXVVP---EDQVRVVERIAQNXFICAPHASQVAALAAL 275
Query: 279 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338
E + + NR++ E L G + +GA Y++A + + D +
Sbjct: 276 DCDAE-LQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334
Query: 339 AHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
+ GV V PG GA G LR S+ +A AD + GL+ L
Sbjct: 335 LEKAGVAVTPGLDFDPERGA----GTLRFSY-------ARATAD-IEEGLDRL 375
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 25/240 (10%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P +F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
+ D Y +YDG +H + + + + S K + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI 265
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 134/314 (42%), Gaps = 33/314 (10%)
Query: 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
V++T G+ QA + D G V++ AP Y + +F++ G + V P + PD
Sbjct: 94 VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PD 150
Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FM 208
D LE+ L+ + L + + NP+G P KR+ + G +V D+ Y +
Sbjct: 151 LDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYF 210
Query: 209 YDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 261
+ R E V+ L SFSK G RV + +A+P ++ +L++ +
Sbjct: 211 GEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQ----KLVQAKQG 265
Query: 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR------EIIREALSPLGEGAVKGGE 315
+ +++Q L L+ G ERV+ + R + + RE + KGG
Sbjct: 266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG- 324
Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCK 371
+++W LP K L + R A V +PGG G LR+S+ L +
Sbjct: 325 --MFVWMELP-KGLSAEGLFRR-ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIA 380
Query: 372 AAADRLRRGLEELV 385
RL R L+ L+
Sbjct: 381 EGVRRLGRALKGLL 394
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 32/309 (10%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--KLNQENKLYKSSVMVTAGANQ 100
+ P++ E++ E P + Y G+ ELR+A K Q + +V+VT G ++
Sbjct: 56 KTPEVFFERIYE--NKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSE 113
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
A + + + GD +++ P+Y N ++ GV I P + + + + + LE
Sbjct: 114 AILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLI---PVTRRX--EEGFAIPQNLE 168
Query: 161 TKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKH 214
+ + +V NP NP+G + + + ++ + G +L+VD Y F +
Sbjct: 169 SFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA 228
Query: 215 CCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
+E D VV + S S + G RVG I E+ A +L + + P+ I S +
Sbjct: 229 LSIESDKVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGS--V 286
Query: 274 ALYSLQTGPEWVTERVKDLVRN--REIIREALSPLGEGAVK---GGEGAIYLWARLPEKH 328
L +L + D VR RE + L L E +K GA Y+ A LP +
Sbjct: 287 GLLNLD-------DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVED 339
Query: 329 LDDFEVVRW 337
++F RW
Sbjct: 340 AEEF--ARW 346
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P +F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
+ D Y +YDG +H + + + + S + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P +F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
+ D Y +YDG +H + + + + S + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 159/391 (40%), Gaps = 49/391 (12%)
Query: 1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
M + L KR + + V+ +L K ++L QG + PK A+ + D
Sbjct: 9 MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59 PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
P ++Y G P L AL K +Q N + + V+VT GA +A + D G
Sbjct: 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
D V++ P +F+ Y M G+ + + P + ADW LE K
Sbjct: 126 DEVIIIEP-FFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK-- 182
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEG 219
K++ + P NP G + L+ +++LCK V D Y +++ +H C + G
Sbjct: 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 220 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 274
+ + + S K + + GW++G+ P E L V N + CA+ I + +A
Sbjct: 243 MWERTITIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 275 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 327
L L++ + +L+ R+ + L+ +G +GG + W+ L K
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 328 -------HLDDFEVVRWLAHRHGVVVIPGGA 351
D+ +W+ G+ IP A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 30/353 (8%)
Query: 18 IMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVW-DPSISKYGADEGLPELR 74
+M + EL + +SLA G + P + E KE++ +P Y G+PELR
Sbjct: 22 VMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELR 81
Query: 75 DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
+ L L + + L S ++++T G A + L D GD V+ P Y N+ ++F+
Sbjct: 82 EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQ 141
Query: 133 TGVTHILVGPCSSKTLHPDADWLE---KTLETKPTP-KLVSVVNPG-NPSGTYIPERLLK 187
G I P + + D LE K L+ K KL+ + G NP G + K
Sbjct: 142 LG-AKIEGVPVDNDGMR--VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRK 198
Query: 188 RISDLCKAAGSWLVVDNTY-FM-YDG-----RKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240
+ ++ ++ D Y FM Y+G K EG V+ + SK G G+R+G
Sbjct: 199 ALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSKVLG-TGFRIG 256
Query: 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNRE 297
+I E+ ++L + I CA ISQ++AL L+ G + + R+
Sbjct: 257 WIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313
Query: 298 IIREAL-SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
I+ +AL + L +++ LPE D L R GVVV+PG
Sbjct: 314 IMLKALENHLPNAEFTKPIAGMFVMFFLPEGA-DGISFANELMEREGVVVVPG 365
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 55/342 (16%)
Query: 63 KYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
YG EG P + ++ ++LY ++ T GA A + ++ +L + GD V+
Sbjct: 58 NYGWIEGSPAFKKSV-------SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVIS 110
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
P Y Y + G L PD + L + + +PT K + + N NP+G
Sbjct: 111 LYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKXICINNANNPTG 168
Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLF-------SFSKA 231
L+ + ++ G++++ D Y R ++ ++ ++ S S
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVY-----RSFSELDVPSIIEVYDKGIAVNSLSXT 223
Query: 232 YGMMGWRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTERVK 290
Y + G R+G++A +V T +L+ +D ICA + +A +L E
Sbjct: 224 YSLPGIRIGWVAANHQV----TDILRDYRDYTXICAGVFDDLVAQLALAHYQEI------ 273
Query: 291 DLVRNREIIREALSPLGE--------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342
L RNR I+ E L+ L + ++ + + +DF L H
Sbjct: 274 -LERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXEDF--CLQLLQEH 330
Query: 343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
GV+++PG G++R+ F C+ + L +GLE+L
Sbjct: 331 GVLLVPGNRFERDGYVRLGFA------CE--QETLIKGLEKL 364
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 60 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 118
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 119 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 177
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
+ + L V V NP NP GT + L + + G L+ D Y
Sbjct: 178 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 237
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
M + C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 238 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 295
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 296 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 350
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 351 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 407
Query: 362 FGGLVEDDCKAAADRLR 378
F L E A RL+
Sbjct: 408 FANLPERTLDLAMQRLK 424
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 62 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
+ + L V V NP NP GT + L + + G L+ D Y
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
M + C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 362 FGGLVEDDCKAAADRLR 378
F L E A RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 24/358 (6%)
Query: 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---K 89
++ A G+ P+ ++ ++ + P KYGA G + A+V ++ + +
Sbjct: 50 INXAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKE 109
Query: 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
V + G V + + + GD V++ P Y + + + P + + H
Sbjct: 110 DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPV---PLNLEPPH 166
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F 207
DW + + KL+ + P NP+G+ + + K + +V D Y F
Sbjct: 167 YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF 226
Query: 208 MYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263
+D + + D + ++S SK Y G+RVG+ + L K Q +
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX---IQALKKYQTHTN 283
Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
Q A+Y+L +++ E+ ++ + R EA + +G IY+W
Sbjct: 284 AGXFGALQDAAIYALNHYDDFLEEQ-SNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLE 342
Query: 324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCK--AAADRL 377
P + D + ++L ++V PG G G ++RIS L DD K AA RL
Sbjct: 343 TPPGY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS---LALDDQKLDEAAIRL 396
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 62 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
+ + L V V NP NP GT + L + + G L+ D Y
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
M + C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 362 FGGLVEDDCKAAADRLR 378
F L E A RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 158/391 (40%), Gaps = 49/391 (12%)
Query: 1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
M + L KR + + V+ +L K ++L QG + PK A+ + D
Sbjct: 9 MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59 PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
P ++Y G P L AL K +Q N + + V+VT GA +A + D G
Sbjct: 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
D V++ P +F+ Y M G+ + + P + ADW LE K
Sbjct: 126 DEVIIIEP-FFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK-- 182
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEG 219
K++ + P NP G + L+ +++LCK V D Y +++ +H C + G
Sbjct: 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 220 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 274
+ + + S + + GW++G+ P E L V N + CA+ I + +A
Sbjct: 243 MWERTITIGSAGXTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 275 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 327
L L++ + +L+ R+ + L+ +G +GG + W+ L K
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 328 -------HLDDFEVVRWLAHRHGVVVIPGGA 351
D+ +W+ G+ IP A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 46/357 (12%)
Query: 60 SISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
+I+ + GLPE R A+ K + + + V++ GA A I+ L D GD+
Sbjct: 75 AIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA 134
Query: 116 VVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VS 169
++ +PYY FN + ++ TGV I + SS + +++ E + +
Sbjct: 135 FLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--------------MYDGRKHC 215
+ NP NP GT + + LK + LV D Y + D ++
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253
Query: 216 CVEGDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQ-----LLKVQDNIPICASII 269
D V ++S SK G+ G+RVG I ++ +V A + L+ Q + A +
Sbjct: 254 YCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLS 313
Query: 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR----LP 325
+ L+ + +R K E++ G +K G ++ W L
Sbjct: 314 DEKFVDNFLRESAMRLGKRHKHFTNGLEVV-------GIKCLKNNAG-LFCWMDLRPLLR 365
Query: 326 EKHLD-DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 379
E D + + R + + + V PG + C+ G R+ F + + A R+RR
Sbjct: 366 ESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 132/338 (39%), Gaps = 48/338 (14%)
Query: 62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA- 120
S YGA++G LR+A+ + ++ G+ CD +MF
Sbjct: 105 SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK----------CDIARIQMMFGS 154
Query: 121 -----------PYYFNSYMSFQMTGVTHILVGPCSSKTL--HPDADWLEKTLETKPTPKL 167
P Y ++ + MTG H G + + +PD + + K T +
Sbjct: 155 KPTVAVQDPSYPVYVDTSVMMGMTG-DHNGTGFDGIEYMVCNPDNHFFPDLSKAKRT-DI 212
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHC------CVEGDH 221
+ +P NP+G L + + + GS LV D Y +Y C D
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADE 272
Query: 222 V-VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPIC---ASIISQHLAL 275
V + SFSK G G R+G+ P ++ + + N + C AS I Q L
Sbjct: 273 VAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGL 332
Query: 276 YSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332
LQ PE + E +K N +I++ + +G +V GG+ A Y+W P K +
Sbjct: 333 ACLQ--PEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--PSW 387
Query: 333 EVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVED 368
+V + R +V PG G G +R S G E+
Sbjct: 388 DVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSREN 425
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
L T ++ +P NP+G L ++ + K GS +V D+ Y MY +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
R + G V + SFSK G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 49/348 (14%)
Query: 61 ISKYGADEGLPELRDA----LVKKLNQENKLYKSSVMVTAGANQA---FVNIVLTLCDAG 113
+ KY GLPELR A L ++ + + ++ G+ +A FV VL G
Sbjct: 59 LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDG 118
Query: 114 DSVVMFAPY-YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
+ +P ++ Y + G I C + + +PD W + E KLV V +
Sbjct: 119 IKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPD--WRSISEEVWKRTKLVFVCS 176
Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEG--------DH 221
P NPSG+ + K + DL G + D Y +DG K C++
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236
Query: 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 281
++ S S + G R G++A +E+ L + SI Q ++ +
Sbjct: 237 LLXFTSLSXRSNVPGLRSGFVAGDAEL---LKNFLLYRTYHGSAXSIPVQRASIAA---- 289
Query: 282 PEWVTERVKDLVRNREIIREALS---PLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVR 336
W E + ++ NR + +E P+ + VK + + Y+W ++P+ DD R
Sbjct: 290 --WDDE--QHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDG--DDLAFAR 343
Query: 337 WLAHRHGVVVIPG---------GACGCRGHLRISFGGLVEDDCKAAAD 375
L + + V+PG G G G++RI+ V KAA D
Sbjct: 344 NLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRIALVADVATCVKAAED 390
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 171/397 (43%), Gaps = 44/397 (11%)
Query: 21 QIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKEL---VWDPSISK---YGADEGLPE 72
+++EL++ + +SLA G+ P +E +K++ V + K YG +G
Sbjct: 30 EVRELLKLVETSDVISLAGGLP--APETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP 87
Query: 73 LRDALVKKLNQ--ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
LR AL + + + + + K +M AG+ QA I + GD +V+ AP Y + +F
Sbjct: 88 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF 147
Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLK 187
+ I + P K + D + K + + +V NP+G + K
Sbjct: 148 KYYDPEFISI-PLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 206
Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGR-----KHCCVEGDHVVNLFSFSKAYGMMGWRVG 240
++ +L +V D Y Y G KH G V+ L +FSK G+R+G
Sbjct: 207 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG-RVIYLGTFSKILA-PGFRIG 264
Query: 241 YI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR----N 295
++ A+P + ++ + +I +C + Q +A ++ G ++ E + ++
Sbjct: 265 WVAAHPHLIR----KMEIAKQSIDLCTNTFGQAIAWKYVENG--YLDEHIPKIIEFYKPR 318
Query: 296 REIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353
R+ + EAL V+ EG +++ LPE + R +A GV +PG A
Sbjct: 319 RDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMERAVA--KGVAYVPGEAFF 376
Query: 354 C----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
+ +R++F + E+ + RL ++E +K
Sbjct: 377 VHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMK 413
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
L T ++ +P NP+G L ++ + K GS +V D+ Y MY +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
R + G V + SFS+ G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 177/429 (41%), Gaps = 55/429 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 XKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY---D 210
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 211 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267
GR + D V+ SFSK G R+G++ P + ++V P +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 268 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 320
+ISQ L + + G +RV D N++ I+ A L+ L E V ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 321 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 374
W ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 375 DRLRRGLEE 383
L + ++E
Sbjct: 415 QVLAQLIKE 423
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 177/429 (41%), Gaps = 55/429 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY---D 210
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 211 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267
GR + D V+ SFSK G R+G++ P + ++V P +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 268 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 320
+ISQ L + + G +RV D N++ I+ A L+ L E V ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 321 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 374
W ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 375 DRLRRGLEE 383
L + ++E
Sbjct: 415 QVLAQLIKE 423
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 23/273 (8%)
Query: 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK 146
++ V+VT GA +A VL L + G V++ P+Y +SY H + P +
Sbjct: 86 ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTVPLVPDGR 144
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
DAD L + + P + + + +P NP+G + L I+++ AA ++ D Y
Sbjct: 145 GFALDADALRRAV--TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVY 202
Query: 207 --FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGF--ATQLL 256
++D +H + G + + + S + + GW++G+ P+E + G A Q L
Sbjct: 203 EHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYL 262
Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316
P Q +L T WV L R+ + L+ +G AV G
Sbjct: 263 SYVGGAPF------QPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVHDSYG 315
Query: 317 AIYLWAR-LPEKHLDDFEVVRWLAHRHGVVVIP 348
+L A P + D E L + GV IP
Sbjct: 316 TYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP 348
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 119/308 (38%), Gaps = 45/308 (14%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
L T ++ +P NP+G L ++ + K GS +V D+ Y MY +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
R + G V + SFS G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+ K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 134/353 (37%), Gaps = 36/353 (10%)
Query: 22 IQELVRGAK---NAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
++ L+RGA V + G V +P A + V + Y G +RD L
Sbjct: 28 LEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLL 87
Query: 78 VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQM 132
+L + +++T G A V GD V + P YF + F
Sbjct: 88 APRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFE 147
Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
+ + S+ D K ++ NP NP+G + +I+ L
Sbjct: 148 GEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAAL 207
Query: 193 CKAAGSWLVVDNTY--FMYDG------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244
G+ ++ D Y Y G R V+ ++VV + S + G+R+G +A+
Sbjct: 208 AARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG-VAF 266
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
S + K+Q + + A+ SQ + P W +R+ R++ I E L
Sbjct: 267 GSRA--IIARXEKLQAIVSLRAAGYSQAVLRGWFDEAPGWXEDRI---ARHQAIRDELLH 321
Query: 305 PLGEGAVKGGEGAI--------YLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
L +G EG YL+ RLP+ + E V+ L + GVVV PG
Sbjct: 322 VL-----RGXEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPG 369
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+ K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+ K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 151/370 (40%), Gaps = 45/370 (12%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 45 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 103
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 104 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 162
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
+ + L V V NP NP GT + L + + G L+ D Y
Sbjct: 163 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 222
Query: 207 -----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFATQLLKVQD 260
+ + K + HVV S K G+ G+RVG I + V AT++
Sbjct: 223 SPSFISVMEVLKDEVWQRVHVVYSLS-XKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG- 280
Query: 261 NIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317
S +QHL L + ++ E K L + ++ + L G + G G
Sbjct: 281 ----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAG- 335
Query: 318 IYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVED 368
++ W + +HL + E+ + + + + + PG +C C G R+ F L E
Sbjct: 336 LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPER 393
Query: 369 DCKAAADRLR 378
A RL+
Sbjct: 394 TLDLAMQRLK 403
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 142/353 (40%), Gaps = 49/353 (13%)
Query: 15 EMPIMVQIQELVRGAKNA----VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGL 70
E + + + E R A+ + L+ G PP+ ++ + E + DP+ Y
Sbjct: 6 EPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC----- 60
Query: 71 PELRDALVKKLNQENKLY----------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
L+ + L + + Y + + G+ + +++L L + D +++
Sbjct: 61 --LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPED-LLLLP 117
Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLH-----PDADWLEKTLETKPTPKLVSVVNPGN 175
+ SY + P L P+ W E K++ + P N
Sbjct: 118 EVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREA--------KVLLLNYPNN 169
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--MYDGRKHCCVE----GDHVVNLFSFS 229
P+G + L + G WL+ DN Y +Y+G + + VV LFS S
Sbjct: 170 PTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLS 229
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
K+Y + G+R+G+ A SE E A +L +V+ I + + +L+T P+ V
Sbjct: 230 KSYNLAGFRLGF-ALGSE-EALA-RLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGY 285
Query: 290 KDLVRNREI-IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341
+ R R + + EAL G ++ +YLW RLPE +DD E L R
Sbjct: 286 ARVYRERALGMAEALK--GVLSLLPPRATMYLWGRLPE-GVDDLEFGLRLVER 335
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ + D V F P Y + Y F L P +
Sbjct: 74 LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E +V + NP NP+G ++RI G+++ +D Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
+ + G + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
S +SQ A +L E ER K +V RE ++ AL +G
Sbjct: 232 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 273
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ + D V F P Y + Y F L P +
Sbjct: 86 LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 140
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E + V + NP NP+G ++RI G+++ +D Y
Sbjct: 141 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 188
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
+ + G + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 189 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 243
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
S +SQ A +L E ER K +V RE ++ AL +G
Sbjct: 244 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 285
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 176/430 (40%), Gaps = 57/430 (13%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 4 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 63
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 64 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 123
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 124 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 182
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+ K
Sbjct: 183 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 242
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
V+G V+ SFS G R+G++ P + ++V P
Sbjct: 243 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 300
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 301 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 357
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 358 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 415
Query: 374 ADRLRRGLEE 383
L + ++E
Sbjct: 416 FQVLAQLIKE 425
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 57/430 (13%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL L +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y+ K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
V+G V+ SFS G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 151/383 (39%), Gaps = 87/383 (22%)
Query: 43 QPPKMAMEKVKELVWDPSISK---------------YGADEGLPELRDALVKKLNQENKL 87
P + E++K L SIS+ Y +G+ LRDA+ + +
Sbjct: 94 HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGF 153
Query: 88 YKSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
++ + +T GA+ V++++ L + D +++ P Y S + G G
Sbjct: 154 PANADDIFLTDGASPG-VHLMMQLLIRNEKDGILVPIPQYPLYSASIALHG------GAL 206
Query: 144 SSKTLHPDADW------LEKTLETKPTP----KLVSVVNPGNPSGTYIPERLLKRISDLC 193
L+ W ++K LE + + + V+NPGNP+G + E I C
Sbjct: 207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFC 266
Query: 194 KAAGSWLVVDNTY---FMYDGRKHCCVE--------GDHVVNLFSFSKA----YGMMGWR 238
K G L+ D Y D +K + G+ + L S+ YG G R
Sbjct: 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKR 326
Query: 239 VGYIAYPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGPEWVTER------ 288
GY E+ GF+ Q+ K+ ++ +C++I Q LA SL P ++
Sbjct: 327 GGYF----EITGFSAPVREQIYKIA-SVNLCSNITGQILA--SLVMNPPKASDESYASYK 379
Query: 289 ------VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR--LPEKHL----------D 330
+ L R + + A + L EGA+Y++ + LP+K + D
Sbjct: 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPD 439
Query: 331 DFEVVRWLAHRHGVVVIPGGACG 353
F +R L G+VV+PG G
Sbjct: 440 AFYALRLL-ESTGIVVVPGSGFG 461
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 118/301 (39%), Gaps = 31/301 (10%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA +I
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---CDISRLQ 136
Query: 110 CDAGDSVVMFA-----PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADWLEKTLET 161
G +V + P Y +S + TG + V G P+ + L T
Sbjct: 137 VXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPD-LST 195
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----DGRKHCCV 217
++ +P NP+G L ++ + K GS +V D+ Y Y + R +
Sbjct: 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEI 255
Query: 218 EGDHVV--NLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC-----AS 267
G V SFSK G G R+G+ P ++ +GF + N IC AS
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIICTCFNGAS 312
Query: 268 IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326
ISQ AL L G E + + N II + + LG V GG+ A Y+W P
Sbjct: 313 NISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPYVWVHFPN 371
Query: 327 K 327
+
Sbjct: 372 Q 372
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ D V F P Y + Y F L P +
Sbjct: 74 LSKNNVSVGNGADE----IIYVXXLXFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E + V + NP NP+G ++RI G+++ +D Y
Sbjct: 129 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
+ + G + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
S +SQ A +L E ER K +V RE + AL G
Sbjct: 232 NVSYVSQXFAKVALDHR-EIFEERTKFIVEERERXKSALREXG 273
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 35/355 (9%)
Query: 22 IQELVRGA--KNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRD 75
I+E+++ A K+A+S GV + P K E KE++ +Y EG P L+
Sbjct: 33 IREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92
Query: 76 ALVKKLNQE---NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
++K L + L + +++ T G+ QA I D V+ P Y + +F+
Sbjct: 93 QILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQ 152
Query: 133 TGVTHILVGPCSS-----KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
+ + +V P L +K + K + V N NP+G K
Sbjct: 153 Y-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211
Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGY 241
+ ++ + ++V D+ Y Y+G + + VV L +FSK G R+G
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAP-GLRIGX 270
Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREII 299
+A E F ++++ + + +C+ I+ LA L+ E + ++ R R +
Sbjct: 271 VAGSKE---FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVX 327
Query: 300 REALSPL-----GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
AL G VK EG +++W LPE D +E + A R V +PG
Sbjct: 328 LNALEEYFSDIPGVKWVKS-EGGLFIWLTLPE-GFDTWEXFEY-AKRKKVFYVPG 379
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
A+++ Q + V+V+ GA++ ++ C+ G +++ P + Y +S + G
Sbjct: 62 AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
V +T+ +W L+ + K+V V +P NP+G I + + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
L + + +V D Y + + E H+ L + SKA+ + G R G+ EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 249 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
L+KV P+ A I +Q L+ G + ERV ++ RE + AL
Sbjct: 233 INL---LMKVIAPYPLSTPVADIAAQALS----PQGIVAMRERVAQIIAEREYLIAAL 283
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 26/238 (10%)
Query: 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
A+++ Q + V+V+ GA++ ++ C+ G +++ P + Y +S + G
Sbjct: 62 AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
V +T+ +W L+ + K+V V +P NP+G I + + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
L + + +V D Y + + E H+ L + SKA+ + G R G+ EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 249 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
L KV P+ A I +Q L+ G ERV ++ RE + AL
Sbjct: 233 INL---LXKVIAPYPLSTPVADIAAQALS----PQGIVAXRERVAQIIAEREYLIAAL 283
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 52/249 (20%)
Query: 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
G K + LA + P A+E +++ + + + D+ EL+ L +K +N+
Sbjct: 28 GVKEVIKLASNENPFGTPPKAIECLRQ---NANKAHLYPDDSXIELKSTLAQKYKVQNE- 83
Query: 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVT----HILVGP 142
++++ AG++Q V+ FA + NS +F GVT I
Sbjct: 84 ---NIIIGAGSDQ---------------VIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 143 CSSK-----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI----PERLLKRISDL 192
C +K ++ + D +K ET K KL+ + P NP G + +K +++
Sbjct: 126 CGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED 185
Query: 193 CKAAGSWLVVDNTYFMY----DGRKH---CCV--EGDHVVNLFSFSKAYGMMGWRVGY-I 242
C +V+D Y + D +KH C + E D+V+ L +FS YG+ G R+GY I
Sbjct: 186 C-----LVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGI 240
Query: 243 AYPSEVEGF 251
A + + F
Sbjct: 241 ANANIISAF 249
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 124/319 (38%), Gaps = 31/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 70 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 127
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 128 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 183
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
+ A ++VD Y + + +V + SKA+ G R+GY +A
Sbjct: 184 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 244 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 296
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 297 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 347
Query: 365 LVEDDC--KAAADRLRRGL 381
E+D AAA+ ++ L
Sbjct: 348 PEENDAFLDAAAEIIKLNL 366
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K P K+ VNP NP + +R L+R+ ++ L++ D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 --FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
F D + + ++ + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K P K+ VNP NP + +R L+R+ ++ L++ D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 --FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
F D + + ++ + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 124/319 (38%), Gaps = 31/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
+ A ++VD Y + + +V + SKA+ G R+GY +A
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 365 LVEDDC--KAAADRLRRGL 381
E+D AAA+ ++ L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 20/204 (9%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDG-RKHCCVEGDHVVNLF 226
V + NP NP+G + L D + L++D TY Y R G++ +
Sbjct: 139 VVLANPSNPTGQALSAGEL----DQLRQRAGKLLIDETYVDYSSFRARGLAYGENELVFR 194
Query: 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGPEWV 285
SFSK+YG+ G R+G + PSE+ + + C + H +L
Sbjct: 195 SFSKSYGLAGLRLGALFGPSEL------IAAXKRKQWFCNVGTLDLHALEAALDNDRARE 248
Query: 286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345
K L + R + +AL LG + + E+ L R+L R G+
Sbjct: 249 AHIAKTLAQRRRVA-DALRGLGYRVASSEANFVLVENAAGERTL------RFLRER-GIQ 300
Query: 346 VIPGGACGCRGHLRISFGGLVEDD 369
V G G H+RIS G ++D
Sbjct: 301 VKDAGQFGLHHHIRISIGREEDND 324
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208
D + L+ + P +V +VNP NP+GT P +++ K A + +VD Y F+
Sbjct: 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWI-ASKPANTXFIVDEAYAEFV 186
Query: 209 YDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGY-IAYPS 246
D R ++++ L +FSK + G RVGY +A+P+
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAVAHPT 230
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
E L V++T+G +QA + L + G ++++ P + + G+ L
Sbjct: 90 EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
K+ D LE ++ K T LV V NP NP G+ +R L++I + + ++ D
Sbjct: 150 PEKSWEIDLKQLESLIDEK-TACLV-VNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 204 NTY---FMYDGRKHCCVEGDHVVNLFS---FSKAYGMMGWRVGYIAYPSEVEGFATQ--- 254
Y D + V + S + + + GWR+G+I + F +
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRD 267
Query: 255 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313
L+K+ I +I+ L +T E+ + + L N ++ ALS +
Sbjct: 268 GLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVR 327
Query: 314 GEGAIYLWARLPEKHLDDFE 333
GA+YL + +H +FE
Sbjct: 328 PSGAMYLMVGIEMEHFPEFE 347
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164
L AGD V + P F Y+ + P + PD W E P
Sbjct: 189 LLKAGDKVAIGMPV-FTPYIEIPELAQYDLKEVPIHAD---PDNGWQYSDAELDKLKDPD 244
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY--FMYDGRKHCCVEGD 220
K+ VNP NP + +R L R+ + L++ D+ Y F + + V
Sbjct: 245 VKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFADEFQSLFSVCPR 304
Query: 221 HVVNLFSFSKAYGMMGWRVGYIA 243
+ + ++SFSK +G GWR+G IA
Sbjct: 305 NTLLVYSFSKYFGATGWRLGVIA 327
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 134/348 (38%), Gaps = 35/348 (10%)
Query: 49 MEKVKELVWDPSISKYGADEGLPELRDA--------LVKKLNQENKLYKSSVMVTAGANQ 100
++K+KE + + Y G PE R+A V K ++ + K +V++ +G +
Sbjct: 56 IKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSH 115
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
+ + +CDAGD ++ P + + + G+ D D + + +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175
Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE 218
K KL+ V NP NP G+ + ++ I L + L D Y ++ G+
Sbjct: 176 DK--TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF 233
Query: 219 GDHV--------VNLFSFSKAYGMMGWRVGYIAY-------PSEVEGFATQLLKVQDNIP 263
V L + + GWR+G++ Y PS +EG + V
Sbjct: 234 TSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCT 293
Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
+ + + + L L T E + + V + + + + A GA+YL +R
Sbjct: 294 VVQAALGEAL----LNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349
Query: 324 LP-EKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 367
+ EK+ D D E L V V+PG G R++ VE
Sbjct: 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVE 397
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 123/319 (38%), Gaps = 31/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
+ A ++VD Y + + +V + S A+ G R+GY +A
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 365 LVEDDC--KAAADRLRRGL 381
E+D AAA+ ++ L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 14/261 (5%)
Query: 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGP 142
E L V++T+G +QA + L + G ++++ P F+ Y + + G+ L
Sbjct: 113 EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPG-FSLYKTLAESMGIEVKLYNL 171
Query: 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
K+ D LE ++ K +V+ NP NP G+ +R L++I + ++
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVN--NPSNPCGSVFSKRHLQKILAVAARQCVPILA 229
Query: 203 DNTY--FMYDGRKH---CCVEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ-- 254
D Y ++ K+ + D +++ +K + + GWR+G+I + F +
Sbjct: 230 DEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIR 289
Query: 255 --LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
L+K+ I +I+ L +T E+ + L N ++ AL+ +
Sbjct: 290 DGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPV 349
Query: 313 GGEGAIYLWARLPEKHLDDFE 333
GA+YL + +H +FE
Sbjct: 350 RPSGAMYLMVGIEMEHFPEFE 370
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K + P K+ VNP NP + ER L+R+ + L++ D+ Y
Sbjct: 233 YPDSE-LDKLKD--PAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY 289
Query: 207 FMY-DGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
+ DG + + + + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADGFQSLFAICPANTLLVYSFSKYFGATGWRLGVVA 328
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 164 TPKL--VSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYFMY----DGRKHCC 216
TP L + + P NP+G +PER LL+ I+D CK+ L++D + + G
Sbjct: 144 TPDLDCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL 202
Query: 217 VEGDHVVNLFSFSKAYGMMGWRVGYI 242
+ H+ L S +K Y + G R+GY+
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYL 228
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS 145
+L + ++ TAG ++ + L D + V P + + + G + P
Sbjct: 81 QLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGA-EVREIPLLQ 139
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP----ERLLKRI-SDLCKAAGSWL 200
H D + ++ K T +V + NP NP+G YI + L R+ SD+ +
Sbjct: 140 DGEH-DLEGXLNAIDEKTT--IVWICNPNNPTGNYIELADIQAFLDRVPSDVL------V 190
Query: 201 VVDNTYFMY-----DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255
V+D Y Y + + +++ +FSK YG+ RVGY G A +
Sbjct: 191 VLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGY--------GIADKE 242
Query: 256 LKVQDNI---PICASIISQHLALYSLQ 279
+ Q NI P + I Q LA+ +++
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIK 269
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 106/282 (37%), Gaps = 21/282 (7%)
Query: 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG---PCSS 145
K ++ G A + + GD+V++ +P Y+ + ++ H LV +
Sbjct: 119 KEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND--HRLVENSLQIIN 176
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
D + LEK + K+ + +P NP G L +I++LCK G LV D
Sbjct: 177 GRFEIDFEQLEKDI-IDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235
Query: 206 Y--FMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGY--IAYPSEVEGFA-TQ 254
+ G H + D + L S +K + + G + + I S F Q
Sbjct: 236 HQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQ 295
Query: 255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314
L Q +P I +Q + Q G W+ E + N +++ + L + V
Sbjct: 296 LANNQHEVPTVGMIATQA----AFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP 351
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 356
EG +W + ++ L + VV+ G G G
Sbjct: 352 EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEG 393
>pdb|3MKJ|A Chain A, Methionine Gamma-Lyase From Citrobacter Freundii With
Pyridoximine-5'- Phosphate
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 XTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTYF 207
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTFM 189
>pdb|3JWA|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Methionine Phosphinate
pdb|3JWB|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Norleucine
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTYF 207
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTFM 189
>pdb|3JW9|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With S-Ethyl-Cysteine
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTYF 207
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTFM 189
>pdb|2RFV|A Chain A, High Resolution Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii
Length = 398
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 18/137 (13%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQM 132
DAL KKL + + + TA A +LTLC GD +V + Y ++++S M
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSM 124
Query: 133 T--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
G+ V + E +P K+V + P NP+ + + ++ ++
Sbjct: 125 PKFGINVRFVDAAKPE---------EIRAAMRPETKVVYIETPANPTLSLVD---IETVA 172
Query: 191 DLCKAAGSWLVVDNTYF 207
+ G+ LVVDNT+
Sbjct: 173 GIAHQQGALLVVDNTFM 189
>pdb|1Y4I|A Chain A, Crystal Structure Of Citrobacter Freundii
L-Methionine-Lyase
Length = 398
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K DA E+ +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTYF 207
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTFM 189
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG---- 219
KL + NP NP G + LK++ D+C ++ D + + KH +
Sbjct: 166 KLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKE 225
Query: 220 --DHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGFATQLLKVQDNIPICASIISQH 272
+ + + +K + + G + Y+ P E ++ T++ ++N C S+++
Sbjct: 226 FEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNN---CFSLVATE 282
Query: 273 LALYSLQTGPEWVTERVKDLVRNREI-IREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331
S G W+ ++ L N + I+ + + V+ EG LW L D
Sbjct: 283 A---SYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD 339
Query: 332 FEVVRWLAHRHGVVVIPGGACGC--RGHLRISFG 363
E+ L + V + G + G G+ RI+
Sbjct: 340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLA 373
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 170 VVNPGNPSGTYIPERLLKR---ISDLCKAAGSWLVVDNTYFMYDGR---KHCCVEG-DHV 222
+ NP NP G RLL+R + L + V+D +Y + + ++G ++
Sbjct: 135 LCNPNNPDG-----RLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNL 189
Query: 223 VNLFSFSKAYGMMGWRVGYIA----YPSEVEGFAT 253
V ++SFS AYG+ G R+GYI + V F+T
Sbjct: 190 VXVYSFSHAYGIPGLRIGYIVANKDFXKRVAAFST 224
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 95/253 (37%), Gaps = 61/253 (24%)
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCC---- 216
PK++ ++NPGNP+G + ++ + +L+ D Y + D R H
Sbjct: 236 PKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVL 295
Query: 217 ----VEGDHVVNLFSF---SKAY-GMMGWRVGY---IAYPSEVEGFATQLLKVQDNIPIC 265
E V L SF SK Y G G+R GY I E++G +LL V+ +C
Sbjct: 296 YEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR----LC 351
Query: 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----------- 314
+ Q A + P E + + RE S LG A K
Sbjct: 352 PPVSGQ--AAMDIVVNPPVAGEESFE-----QFSREKESVLGNLAKKAKLTEDLFNQVPG 404
Query: 315 ------EGAIYLWAR--LPEKHLD---------DFEVVRWLAHRHGVVVIPGGACGCRG- 356
+GA+Y + R +P K ++ D L G+ V+PG G R
Sbjct: 405 IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREG 464
Query: 357 --HLRISFGGLVE 367
H R++ VE
Sbjct: 465 TYHFRMTILPPVE 477
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 30/278 (10%)
Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG-PCSSKTLHPDADWLEKTLETKP 163
++ + G+ VV+ P Y Y + + T + V + D LE L KP
Sbjct: 103 LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVL-AKP 161
Query: 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--------------MY 209
K++ + +P NP+G L+ ++DLC+ G ++ D + +
Sbjct: 162 ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA 221
Query: 210 DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI- 268
G G N+ + + AYG++ AY S ++G +D + + +
Sbjct: 222 RGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKG--------RDGLSSPSVLA 273
Query: 269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEGAVKGGEGAIYLWARLPEK 327
++ H+A Y Q G W+ L N I + + + E + + W L
Sbjct: 274 LTAHIAAY--QQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL 331
Query: 328 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFG 363
++DD + + L + V ++PG G RG +R++ G
Sbjct: 332 NIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG 369
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 83/220 (37%), Gaps = 29/220 (13%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDH 221
K P + V +P NP GT I E ++ R D V+ + + + DH
Sbjct: 155 KKGPYIELVTSPNNPDGT-IRETVVNRPDD-----DEAKVIHDFAYYWPHYTPITRRQDH 208
Query: 222 VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 280
+ LF+FSK G G R+G+ + EV + + V S + L L+
Sbjct: 209 DIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKE 268
Query: 281 GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDDFE 333
+ +E RE+++ L E VK E + + PE K L+ +
Sbjct: 269 TCKSESESENFFKYGREMMKNRWEKLRE-VVK--ESDAFTLPKYPEAFCNYFGKSLESYP 325
Query: 334 VVRWLA-----------HRHGVVVIPGGACGC-RGHLRIS 361
WL RH V+ G CG + H+R+S
Sbjct: 326 AFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVS 365
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 120/329 (36%), Gaps = 31/329 (9%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
Y +DE L + D +K + K ++ G A + G++V++ +P Y
Sbjct: 66 YASDELLQAVLDW--EKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVY 123
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
S ++ + L D + LE + + KL + NP NP G
Sbjct: 124 PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDI-VENDVKLYLLCNPHNPGGRVWE 182
Query: 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLFSFSKAYGM 234
+L++I LC+ LV D + G +H D + L S +K + +
Sbjct: 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNI 242
Query: 235 MGWRVGY--IAYPSEVEGFA-TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 291
G + Y I P+ F QL+ + I ++ Y G W+
Sbjct: 243 AGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRY----GKPWLVALKAV 298
Query: 292 LVRNREIIREALSPLGEGA----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347
L N I+ A+ + A V +G +W + L D + L + V++
Sbjct: 299 LEEN---IQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILN 355
Query: 348 PGGACGCRG--HLRISFGG---LVEDDCK 371
G G G H R++ LVE+ CK
Sbjct: 356 RGSDYGSEGELHARLNIAAPKSLVEEICK 384
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 92/241 (38%), Gaps = 42/241 (17%)
Query: 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE----- 84
KN SL ++Y Q P++ E V V D + PEL + L K L++
Sbjct: 12 KNLGSLKWDLMYSQNPEVGNEVVPLSVADMEF------KNPPELIEGLKKYLDETVLGYT 65
Query: 85 --NKLYKSSV-----------------MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
+ YK +V + TAG A N V GD V++ P Y+
Sbjct: 66 GPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYP 125
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
+M+ + I+ K + D+ LEK + K L+ +P NP G +
Sbjct: 126 FFMAIK-NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALL-FCSPHNPVGRVWKK 183
Query: 184 RLLKRISDLCKAAGSWLVVDNTYF--MYDGRKHCCVE------GDHVVNLFSFSKAYGMM 235
L++I D+ + L D +F + G +H + D + + SK + +
Sbjct: 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIA 243
Query: 236 G 236
G
Sbjct: 244 G 244
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 18/175 (10%)
Query: 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
S ++ G+++ N++ G+ + P Y SY T V +T
Sbjct: 83 SWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSY--SYYG------TLAEVQGARVRTFG 134
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F 207
D+ + K+ + P P G P L+ I +L + LV+D TY F
Sbjct: 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFP---LEYIDELARRCAGXLVLDETYAEF 191
Query: 208 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 261
++VV + SK+Y + G R+G IA P + L K++D+
Sbjct: 192 AESNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVI----AALDKIRDH 242
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 93 MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA 152
+ +G A V GD +++ P Y Y + G I SS ++ ++
Sbjct: 89 VFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEGNGRRVI-----SSDLIYENS 143
Query: 153 ----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
+W LE+ L T P+ + NP NP G E +KRI++LC L+ D +
Sbjct: 144 KYSVNWADLEEKLAT-PSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIH 202
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTY--FMYDGRKHCCVEG 219
P+ K + VVNP NP+ L I + ++ D Y F+ + + V
Sbjct: 243 PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIYSVVP 302
Query: 220 DHVVNLFSFSKAYGMMGWRVGYIA 243
+ ++S+S +G GWR+G IA
Sbjct: 303 YNTXLVYSYSXLFGCTGWRLGVIA 326
>pdb|3BWN|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWO|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWO|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWO|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWO|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 29/220 (13%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDH 221
K P + V +P NP GT I E ++ R D V+ + + + DH
Sbjct: 155 KKGPYIELVTSPNNPDGT-IRETVVNRPDD-----DEAKVIHDFAYYWPHYTPITRRQDH 208
Query: 222 VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 280
+ LF+FS G G R+G+ + EV + + V S + L L+
Sbjct: 209 DIMLFTFSXITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKE 268
Query: 281 GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDDFE 333
+ +E RE+++ L E VK E + + PE K L+ +
Sbjct: 269 TCKSESESENFFKYGREMMKNRWEKLRE-VVK--ESDAFTLPKYPEAFCNYFGKSLESYP 325
Query: 334 VVRWLA-----------HRHGVVVIPGGACGC-RGHLRIS 361
WL RH V+ G CG + H+R+S
Sbjct: 326 AFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVS 365
>pdb|2E7I|A Chain A, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7I|B Chain B, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7J|A Chain A, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7J|B Chain B, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
Length = 371
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 94 VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-- 151
VT GA +A ++ +L VVM +++SY++ + G+ LV KT +PD
Sbjct: 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV----PKTDYPDYA 129
Query: 152 ---ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
++ + ETK ++V + P G Y +K+I+ +C L+V+ Y
Sbjct: 130 ITPENFAQTIEETKKRGEVVLALIT-YPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAY 186
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTL 159
A + + TL GD V++ Y +++ H +G K H D AD
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGHTF------AFLHHGIGEFGVKLRHVDMADLQALEA 145
Query: 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P +++ +P NP+ ++ + + ++ + + G+ +VVDNTY
Sbjct: 146 AMTPATRVIYFESPANPN-MHMAD--IAGVAKIARKHGATVVVDNTY 189
>pdb|1TQJ|A Chain A, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
pdb|1TQJ|B Chain B, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
pdb|1TQJ|C Chain C, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
pdb|1TQJ|D Chain D, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
pdb|1TQJ|E Chain E, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
pdb|1TQJ|F Chain F, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
Length = 230
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 167 LVSVVNPGNPSGTYIPERL--LKRISDLCKAAG--SWLVVD------NTYFMYDGRKHCC 216
L+ VNPG ++IPE L ++ + +C G W+ VD NT+ + + +
Sbjct: 139 LIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAI 198
Query: 217 VEGDHVVNLFSFSKA 231
V G V N ++++A
Sbjct: 199 VAGSAVFNAPNYAEA 213
>pdb|3VP6|A Chain A, Structural Characterization Of Glutamic Acid
Decarboxylase; Insights Into The Mechanism Of
Autoinactivation
pdb|3VP6|B Chain B, Structural Characterization Of Glutamic Acid
Decarboxylase; Insights Into The Mechanism Of
Autoinactivation
Length = 511
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193
G ++++ C+ + AD+ K LE K + VN + Y ++ I+D+C
Sbjct: 215 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADIC 274
Query: 194 KAAGSWLVVD 203
+ WL VD
Sbjct: 275 EKYNLWLHVD 284
>pdb|2OKJ|A Chain A, The X-Ray Crystal Structure Of The 67kda Isoform Of
Glutamic Acid Decarboxylase (Gad67)
pdb|2OKJ|B Chain B, The X-Ray Crystal Structure Of The 67kda Isoform Of
Glutamic Acid Decarboxylase (Gad67)
Length = 504
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193
G ++++ C+ + AD+ K LE K + VN + Y ++ I+D+C
Sbjct: 212 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADIC 271
Query: 194 KAAGSWLVVD 203
+ WL VD
Sbjct: 272 EKYNLWLHVD 281
>pdb|3AEJ|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEL|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEM|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEO|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEP|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
Length = 389
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
KP K+V + +P NP+ +K I+ +C G+ LVVD T+
Sbjct: 142 KPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATF 183
>pdb|3ACZ|A Chain A, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|B Chain B, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|C Chain C, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|D Chain D, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3AEJ|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEM|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
Length = 389
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
KP K+V + +P NP+ +K I+ +C G+ LVVD T+
Sbjct: 142 KPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATF 183
>pdb|2ZYI|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
pdb|2ZYI|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
Length = 475
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 284 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 339
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 340 HRHGVVV 346
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYH|A Chain A, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
pdb|2ZYH|B Chain B, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
Length = 475
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 284 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 339
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 340 HRHGVVV 346
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYR|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
pdb|2ZYR|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
Length = 484
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 284 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 339
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 340 HRHGVVV 346
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYS|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Chloride
Length = 479
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 284 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 339
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 340 HRHGVVV 346
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYA|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate
pdb|2ZYA|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate
pdb|2ZYD|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With
Glucose
pdb|2ZYD|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With
Glucose
Length = 480
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 352
RNRE+ E + +G G G EGA+ + +P + +E+V + + V G C
Sbjct: 123 RNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPC 181
>pdb|3FWN|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate And
2'-Monophosphoadenosine-5'-Diphosphate
pdb|3FWN|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate And
2'-Monophosphoadenosine-5'-Diphosphate
Length = 480
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---- 349
RNRE+ E + +G G G EGA+ + +P + +E+V + + V G
Sbjct: 123 RNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCV 182
Query: 350 ---GACGCRGHLRISFGGLVEDDCK--AAADRLRRGLEELVKDGMVQ 391
GA G ++++ G+ D + A A L +G L + + Q
Sbjct: 183 TYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQ 229
>pdb|1CS1|A Chain A, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|B Chain B, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|C Chain C, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|D Chain D, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
Length = 386
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF 207
D L L KP KLV V +P NP + + +I L + G+ VVDNT+
Sbjct: 126 DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFL 177
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,621,390
Number of Sequences: 62578
Number of extensions: 545043
Number of successful extensions: 1589
Number of sequences better than 100.0: 112
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 120
length of query: 398
length of database: 14,973,337
effective HSP length: 101
effective length of query: 297
effective length of database: 8,652,959
effective search space: 2569928823
effective search space used: 2569928823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)