Query 015890
Match_columns 398
No_of_seqs 159 out of 2182
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 01:51:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015890.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015890hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 6.7E-56 1.4E-60 410.4 42.3 347 30-384 28-392 (393)
2 PLN00175 aminotransferase fami 100.0 2.2E-51 4.7E-56 386.7 43.5 368 5-382 30-412 (413)
3 PRK07366 succinyldiaminopimela 100.0 1.1E-50 2.3E-55 381.0 41.3 368 5-380 1-387 (388)
4 PRK07681 aspartate aminotransf 100.0 2.4E-50 5.3E-55 379.5 43.5 365 5-379 3-384 (399)
5 PRK05957 aspartate aminotransf 100.0 6.2E-50 1.3E-54 375.2 45.3 374 5-386 2-388 (389)
6 PRK06348 aspartate aminotransf 100.0 9.3E-50 2E-54 373.6 43.5 365 7-379 6-381 (384)
7 PRK06207 aspartate aminotransf 100.0 7.1E-50 1.5E-54 376.0 42.0 349 29-384 38-403 (405)
8 PRK06107 aspartate aminotransf 100.0 1.8E-49 3.8E-54 373.8 44.4 374 3-384 2-401 (402)
9 PRK09276 LL-diaminopimelate am 100.0 2E-49 4.4E-54 372.1 43.4 366 5-379 2-384 (385)
10 TIGR03540 DapC_direct LL-diami 100.0 3.2E-49 6.9E-54 370.5 43.1 364 7-379 2-382 (383)
11 KOG0257 Kynurenine aminotransf 100.0 1.3E-50 2.9E-55 355.2 31.2 363 7-378 8-414 (420)
12 PRK08960 hypothetical protein; 100.0 5.1E-49 1.1E-53 369.3 43.7 368 7-382 5-386 (387)
13 PRK07683 aminotransferase A; V 100.0 9.1E-49 2E-53 367.1 44.4 369 7-384 5-384 (387)
14 PRK08068 transaminase; Reviewe 100.0 6.2E-49 1.3E-53 368.9 43.0 364 7-379 5-385 (389)
15 PRK09147 succinyldiaminopimela 100.0 5.4E-49 1.2E-53 370.2 41.8 359 9-382 3-395 (396)
16 PRK07309 aromatic amino acid a 100.0 2.1E-48 4.5E-53 365.1 44.9 371 7-384 7-389 (391)
17 PLN00143 tyrosine/nicotianamin 100.0 8.3E-49 1.8E-53 369.2 42.2 354 27-386 29-407 (409)
18 PRK06108 aspartate aminotransf 100.0 1.4E-48 3.1E-53 366.5 43.6 364 10-382 4-381 (382)
19 PRK09148 aminotransferase; Val 100.0 2.1E-48 4.6E-53 366.3 44.1 372 8-387 4-394 (405)
20 PLN02656 tyrosine transaminase 100.0 2.2E-48 4.8E-53 366.6 43.1 355 27-386 28-406 (409)
21 PRK08636 aspartate aminotransf 100.0 3.8E-48 8.2E-53 364.8 44.5 370 8-383 7-400 (403)
22 PRK07337 aminotransferase; Val 100.0 2.2E-48 4.8E-53 365.2 42.5 369 5-381 1-387 (388)
23 PRK08361 aspartate aminotransf 100.0 1.7E-48 3.7E-53 366.2 41.8 369 7-383 10-390 (391)
24 PLN02187 rooty/superroot1 100.0 2.2E-48 4.8E-53 369.7 42.9 354 29-387 65-442 (462)
25 PRK12414 putative aminotransfe 100.0 2.9E-48 6.2E-53 363.3 42.9 362 7-379 7-383 (384)
26 PRK05942 aspartate aminotransf 100.0 3.9E-48 8.5E-53 363.9 42.9 364 7-379 8-388 (394)
27 PLN00145 tyrosine/nicotianamin 100.0 4.8E-48 1E-52 365.2 43.6 352 29-386 51-427 (430)
28 PRK07682 hypothetical protein; 100.0 2.4E-48 5.3E-53 363.9 41.1 358 18-384 8-377 (378)
29 PRK07324 transaminase; Validat 100.0 5.7E-49 1.2E-53 366.2 36.1 346 26-384 22-371 (373)
30 PRK13355 bifunctional HTH-doma 100.0 4.7E-48 1E-52 373.9 43.9 371 5-384 117-515 (517)
31 PRK06290 aspartate aminotransf 100.0 7.8E-48 1.7E-52 361.6 42.3 345 29-384 43-406 (410)
32 TIGR03538 DapC_gpp succinyldia 100.0 5.3E-48 1.1E-52 363.1 41.2 352 14-380 7-392 (393)
33 PRK08912 hypothetical protein; 100.0 8.9E-48 1.9E-52 361.0 42.6 365 8-382 5-385 (387)
34 PTZ00433 tyrosine aminotransfe 100.0 9.6E-48 2.1E-52 362.9 42.9 354 27-385 30-410 (412)
35 PRK05764 aspartate aminotransf 100.0 1.8E-47 4E-52 360.1 44.1 371 5-383 2-391 (393)
36 PRK06855 aminotransferase; Val 100.0 1.3E-47 2.9E-52 363.1 42.6 358 25-385 27-431 (433)
37 PRK09082 methionine aminotrans 100.0 1.6E-47 3.4E-52 358.8 40.3 363 7-379 8-385 (386)
38 PRK08363 alanine aminotransfer 100.0 6.7E-47 1.5E-51 356.2 42.8 352 26-384 26-395 (398)
39 PRK07550 hypothetical protein; 100.0 8.1E-47 1.8E-51 354.4 41.9 366 8-380 3-384 (386)
40 PRK07568 aspartate aminotransf 100.0 1.8E-46 3.9E-51 353.9 44.3 371 5-386 1-395 (397)
41 PTZ00377 alanine aminotransfer 100.0 7.1E-47 1.5E-51 362.9 41.7 354 28-387 44-479 (481)
42 TIGR01264 tyr_amTase_E tyrosin 100.0 9.3E-47 2E-51 355.6 41.4 350 29-383 30-399 (401)
43 PRK05839 hypothetical protein; 100.0 1.5E-46 3.2E-51 350.4 41.1 331 29-382 23-373 (374)
44 KOG0259 Tyrosine aminotransfer 100.0 1.6E-46 3.4E-51 323.8 37.8 352 30-385 61-435 (447)
45 TIGR03537 DapC succinyldiamino 100.0 1.6E-46 3.4E-51 347.6 39.7 335 32-379 2-349 (350)
46 PRK07777 aminotransferase; Val 100.0 4.5E-46 9.8E-51 349.5 42.9 362 10-381 5-384 (387)
47 COG1168 MalY Bifunctional PLP- 100.0 2E-46 4.3E-51 325.8 36.2 349 28-384 23-387 (388)
48 PLN02450 1-aminocyclopropane-1 100.0 1.4E-46 3.1E-51 357.9 37.4 349 30-385 38-432 (468)
49 TIGR01265 tyr_nico_aTase tyros 100.0 1.6E-45 3.5E-50 347.0 42.6 356 22-383 23-401 (403)
50 PRK08175 aminotransferase; Val 100.0 1.8E-45 3.8E-50 346.0 42.5 350 26-383 25-389 (395)
51 PRK09265 aminotransferase AlaT 100.0 6.9E-45 1.5E-49 343.0 43.0 356 21-384 24-402 (404)
52 PRK15481 transcriptional regul 100.0 9.3E-46 2E-50 351.6 37.0 336 30-382 85-430 (431)
53 PRK07865 N-succinyldiaminopime 100.0 3.9E-45 8.4E-50 340.3 39.3 347 5-378 1-363 (364)
54 PRK07590 L,L-diaminopimelate a 100.0 4E-45 8.6E-50 345.0 39.9 336 29-380 33-408 (409)
55 COG0079 HisC Histidinol-phosph 100.0 1.8E-45 3.8E-50 334.8 35.3 330 30-383 22-354 (356)
56 PRK06225 aspartate aminotransf 100.0 1.5E-44 3.2E-49 338.4 42.5 356 18-386 16-379 (380)
57 PLN02607 1-aminocyclopropane-1 100.0 3.9E-45 8.4E-50 345.4 37.4 351 29-386 46-440 (447)
58 PRK09275 aspartate aminotransf 100.0 1.4E-45 3.1E-50 348.6 33.6 349 30-387 100-521 (527)
59 PLN02376 1-aminocyclopropane-1 100.0 1E-44 2.2E-49 346.1 39.1 350 30-385 46-440 (496)
60 COG1167 ARO8 Transcriptional r 100.0 2.5E-44 5.4E-49 340.6 41.1 347 30-386 89-458 (459)
61 PRK01533 histidinol-phosphate 100.0 2.1E-45 4.5E-50 340.6 32.8 328 28-388 27-360 (366)
62 PLN02231 alanine transaminase 100.0 3.1E-44 6.7E-49 344.5 41.5 366 17-388 117-532 (534)
63 PRK02610 histidinol-phosphate 100.0 7.2E-45 1.6E-49 339.2 35.9 335 30-384 28-372 (374)
64 TIGR03542 DAPAT_plant LL-diami 100.0 7.8E-44 1.7E-48 335.4 39.2 336 29-380 32-401 (402)
65 PRK14809 histidinol-phosphate 100.0 4.2E-44 9E-49 332.5 36.1 325 28-382 28-356 (357)
66 PRK06358 threonine-phosphate d 100.0 1.3E-43 2.8E-48 328.1 37.1 326 30-381 19-353 (354)
67 PRK06836 aspartate aminotransf 100.0 1E-42 2.2E-47 327.1 42.9 340 29-384 32-392 (394)
68 TIGR03801 asp_4_decarbox aspar 100.0 5.9E-44 1.3E-48 337.2 34.4 345 31-386 95-519 (521)
69 PRK03158 histidinol-phosphate 100.0 7.1E-44 1.5E-48 331.6 34.0 325 29-380 28-358 (359)
70 PLN03026 histidinol-phosphate 100.0 2.2E-43 4.7E-48 329.3 36.2 324 29-379 51-378 (380)
71 PTZ00376 aspartate aminotransf 100.0 2E-43 4.3E-48 332.7 35.2 355 11-383 8-403 (404)
72 PRK04870 histidinol-phosphate 100.0 1.6E-43 3.5E-48 328.7 33.8 326 29-380 25-355 (356)
73 PRK09257 aromatic amino acid a 100.0 2.7E-43 5.8E-48 331.4 35.3 351 13-380 7-395 (396)
74 PRK08056 threonine-phosphate d 100.0 5.9E-43 1.3E-47 324.3 36.8 329 28-381 18-353 (356)
75 PLN02672 methionine S-methyltr 100.0 7.9E-43 1.7E-47 348.7 38.1 344 28-382 695-1079(1082)
76 PRK08153 histidinol-phosphate 100.0 8.7E-43 1.9E-47 324.4 36.0 335 28-386 29-368 (369)
77 TIGR03539 DapC_actino succinyl 100.0 2.6E-42 5.7E-47 320.1 38.8 325 26-377 17-356 (357)
78 PRK09440 avtA valine--pyruvate 100.0 2.1E-42 4.6E-47 327.7 38.2 356 19-386 20-414 (416)
79 PRK05166 histidinol-phosphate 100.0 1.4E-42 3.1E-47 323.6 34.7 328 28-380 34-368 (371)
80 PF00155 Aminotran_1_2: Aminot 100.0 2.3E-43 4.9E-48 329.2 28.7 338 31-377 2-363 (363)
81 PRK14807 histidinol-phosphate 100.0 5.6E-42 1.2E-46 317.2 37.3 325 30-380 22-349 (351)
82 PRK05387 histidinol-phosphate 100.0 1.6E-42 3.5E-47 322.0 33.8 327 29-382 23-352 (353)
83 PRK02731 histidinol-phosphate 100.0 4.7E-42 1E-46 320.4 36.9 330 28-382 30-365 (367)
84 PRK07392 threonine-phosphate d 100.0 6.8E-42 1.5E-46 317.9 36.2 309 30-364 22-342 (360)
85 PRK09105 putative aminotransfe 100.0 4.5E-42 9.7E-47 319.0 34.8 322 30-381 43-368 (370)
86 PRK03317 histidinol-phosphate 100.0 1.1E-41 2.5E-46 317.5 34.8 329 31-383 27-364 (368)
87 PRK01688 histidinol-phosphate 100.0 2.1E-42 4.5E-47 319.7 29.3 317 30-377 28-350 (351)
88 PLN02368 alanine transaminase 100.0 1.3E-41 2.8E-46 317.3 33.1 313 7-325 11-396 (407)
89 TIGR01141 hisC histidinol-phos 100.0 1.1E-41 2.4E-46 315.4 32.3 323 30-377 19-345 (346)
90 PRK00950 histidinol-phosphate 100.0 6.6E-41 1.4E-45 312.1 34.3 324 28-381 32-360 (361)
91 PRK07908 hypothetical protein; 100.0 1.9E-40 4E-45 307.1 36.8 320 28-382 20-346 (349)
92 PRK04781 histidinol-phosphate 100.0 8.8E-41 1.9E-45 310.1 34.3 321 31-381 32-361 (364)
93 PRK14808 histidinol-phosphate 100.0 1.4E-40 2.9E-45 305.2 33.9 315 28-379 17-333 (335)
94 PLN02397 aspartate transaminas 100.0 4.6E-40 1E-44 310.5 36.7 355 10-382 26-420 (423)
95 PRK03967 histidinol-phosphate 100.0 3.1E-40 6.7E-45 303.5 34.1 316 29-383 17-334 (337)
96 PRK06425 histidinol-phosphate 100.0 2.9E-40 6.3E-45 303.2 33.6 308 31-381 17-331 (332)
97 PRK04635 histidinol-phosphate 100.0 1.1E-40 2.3E-45 309.0 30.0 317 29-379 30-351 (354)
98 PRK08637 hypothetical protein; 100.0 2.1E-39 4.5E-44 304.0 35.7 331 47-384 20-387 (388)
99 PRK03321 putative aminotransfe 100.0 1.8E-39 4E-44 301.1 32.2 322 31-382 23-350 (352)
100 PRK06959 putative threonine-ph 100.0 4.8E-39 1.1E-43 295.2 34.4 310 30-386 24-336 (339)
101 PRK08354 putative aminotransfe 100.0 2.4E-38 5.1E-43 287.9 35.6 299 30-379 8-308 (311)
102 KOG0256 1-aminocyclopropane-1- 100.0 1.2E-38 2.6E-43 277.6 31.2 322 61-387 114-465 (471)
103 PRK05664 threonine-phosphate d 100.0 2.3E-38 4.9E-43 290.3 34.9 306 30-382 20-327 (330)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.5E-38 5.3E-43 290.2 31.9 308 29-377 16-329 (330)
105 cd00609 AAT_like Aspartate ami 100.0 1.5E-35 3.2E-40 275.3 38.6 337 33-378 1-349 (350)
106 KOG0634 Aromatic amino acid am 100.0 3.2E-35 7E-40 258.3 30.8 319 61-386 93-469 (472)
107 PRK13238 tnaA tryptophanase/L- 100.0 2.1E-33 4.5E-38 265.3 35.1 349 17-383 23-433 (460)
108 COG3977 Alanine-alpha-ketoisov 100.0 4.6E-33 9.9E-38 233.2 29.4 354 18-386 19-414 (417)
109 PRK10874 cysteine sulfinate de 100.0 5.6E-33 1.2E-37 262.2 33.7 337 30-384 18-399 (401)
110 TIGR03392 FeS_syn_CsdA cystein 100.0 7.4E-33 1.6E-37 261.1 34.2 333 30-384 15-396 (398)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 3.7E-32 8.1E-37 248.8 36.1 302 43-381 33-345 (346)
112 TIGR01822 2am3keto_CoA 2-amino 100.0 8.2E-32 1.8E-36 253.9 34.2 329 28-384 36-390 (393)
113 PRK06939 2-amino-3-ketobutyrat 100.0 7.1E-32 1.5E-36 254.9 32.9 336 27-384 39-394 (397)
114 KOG0633 Histidinol phosphate a 100.0 1.9E-32 4.1E-37 225.2 24.5 328 28-380 39-374 (375)
115 PLN02822 serine palmitoyltrans 100.0 5.5E-32 1.2E-36 258.0 31.7 336 28-386 107-480 (481)
116 TIGR00858 bioF 8-amino-7-oxono 100.0 2.5E-31 5.3E-36 248.0 32.6 325 27-378 13-360 (360)
117 PRK02627 acetylornithine amino 100.0 2.7E-31 5.8E-36 250.6 32.1 337 27-384 36-395 (396)
118 PRK09295 bifunctional cysteine 100.0 3.1E-31 6.8E-36 250.4 32.5 347 18-382 7-403 (406)
119 PLN02855 Bifunctional selenocy 100.0 3.5E-31 7.7E-36 251.4 32.7 336 29-385 30-420 (424)
120 TIGR01979 sufS cysteine desulf 100.0 5E-31 1.1E-35 249.3 33.1 334 29-384 16-402 (403)
121 COG0520 csdA Selenocysteine ly 100.0 1.8E-30 3.8E-35 240.3 35.7 346 19-382 8-404 (405)
122 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.2E-30 2.6E-35 245.3 33.6 334 27-383 30-381 (385)
123 cd06451 AGAT_like Alanine-glyo 100.0 2.1E-30 4.6E-35 241.1 33.5 321 41-381 7-355 (356)
124 PRK05958 8-amino-7-oxononanoat 100.0 2.8E-30 6.1E-35 243.0 34.1 330 28-380 37-384 (385)
125 cd00617 Tnase_like Tryptophana 100.0 2.6E-30 5.6E-35 240.8 32.4 349 21-384 2-409 (431)
126 PRK02948 cysteine desulfurase; 100.0 6.8E-31 1.5E-35 246.4 28.5 336 33-387 2-378 (381)
127 PRK01278 argD acetylornithine 100.0 2.2E-30 4.8E-35 243.3 32.0 336 27-383 28-388 (389)
128 PRK10534 L-threonine aldolase; 100.0 1E-30 2.2E-35 240.8 29.2 314 32-381 1-331 (333)
129 PLN02721 threonine aldolase 100.0 2.8E-30 6.1E-35 240.2 31.8 327 31-383 6-352 (353)
130 COG1104 NifS Cysteine sulfinat 100.0 1.1E-30 2.4E-35 232.5 27.3 329 43-387 12-381 (386)
131 TIGR01976 am_tr_V_VC1184 cyste 100.0 3E-30 6.5E-35 243.6 31.3 328 32-377 18-397 (397)
132 cd06502 TA_like Low-specificit 100.0 4.6E-30 9.9E-35 237.3 31.3 314 40-379 6-337 (338)
133 cd06454 KBL_like KBL_like; thi 100.0 8.7E-30 1.9E-34 236.5 32.5 328 31-380 2-348 (349)
134 PRK03244 argD acetylornithine 100.0 2.6E-30 5.6E-35 243.7 28.9 338 27-385 40-396 (398)
135 cd00378 SHMT Serine-glycine hy 100.0 1.2E-29 2.5E-34 239.9 33.3 338 29-383 18-385 (402)
136 PRK13392 5-aminolevulinate syn 100.0 6.2E-30 1.3E-34 241.8 31.3 330 29-384 45-398 (410)
137 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1E-29 2.2E-34 236.8 32.2 317 44-383 20-368 (370)
138 PLN02409 serine--glyoxylate am 100.0 1.5E-29 3.2E-34 237.8 33.5 327 40-385 16-374 (401)
139 cd00610 OAT_like Acetyl ornith 100.0 4.2E-30 9E-35 244.0 28.1 340 27-381 33-413 (413)
140 TIGR03403 nifS_epsilon cystein 100.0 2.1E-29 4.6E-34 236.3 32.3 333 35-385 3-377 (382)
141 TIGR00707 argD acetylornithine 100.0 2.5E-29 5.4E-34 235.9 31.5 327 27-381 24-379 (379)
142 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.3E-29 1.8E-33 230.4 32.4 320 41-381 10-360 (361)
143 PRK07179 hypothetical protein; 100.0 1.1E-28 2.5E-33 233.0 33.4 328 28-384 52-399 (407)
144 TIGR01821 5aminolev_synth 5-am 100.0 9E-29 2E-33 233.4 32.5 331 28-384 43-397 (402)
145 PLN02483 serine palmitoyltrans 100.0 1.1E-28 2.4E-33 235.8 33.3 334 29-387 99-470 (489)
146 TIGR02326 transamin_PhnW 2-ami 100.0 1.6E-28 3.5E-33 228.8 33.2 319 41-381 11-360 (363)
147 cd00613 GDC-P Glycine cleavage 100.0 1.2E-28 2.5E-33 232.9 32.5 328 30-377 20-398 (398)
148 TIGR03402 FeS_nifS cysteine de 100.0 1E-28 2.2E-33 231.5 31.0 327 43-386 10-375 (379)
149 PRK13520 L-tyrosine decarboxyl 100.0 5.2E-28 1.1E-32 226.4 35.5 345 16-382 5-370 (371)
150 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 2.7E-28 5.8E-33 227.1 33.3 318 41-380 7-354 (355)
151 cd06453 SufS_like Cysteine des 100.0 4.7E-29 1E-33 233.5 28.3 317 44-377 11-373 (373)
152 PRK09064 5-aminolevulinate syn 100.0 1.9E-28 4.1E-33 231.7 32.4 331 29-385 45-399 (407)
153 PRK13479 2-aminoethylphosphona 100.0 5.3E-28 1.2E-32 225.8 34.2 322 41-384 13-364 (368)
154 COG4992 ArgD Ornithine/acetylo 100.0 9.1E-29 2E-33 219.8 27.1 343 26-386 38-401 (404)
155 KOG0258 Alanine aminotransfera 100.0 2.2E-28 4.7E-33 212.2 28.7 336 45-386 88-472 (475)
156 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-28 2.7E-33 230.9 29.5 328 34-379 2-375 (376)
157 PRK04073 rocD ornithine--oxo-a 100.0 2.1E-28 4.6E-33 230.0 30.1 334 27-381 37-395 (396)
158 PRK02936 argD acetylornithine 100.0 5.8E-28 1.2E-32 226.2 31.7 333 27-381 26-377 (377)
159 TIGR02006 IscS cysteine desulf 100.0 5.3E-28 1.2E-32 227.9 29.7 334 32-385 4-379 (402)
160 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.5E-27 5.4E-32 221.9 33.7 334 30-384 18-382 (387)
161 PRK13393 5-aminolevulinate syn 100.0 3.9E-27 8.3E-32 222.4 34.8 334 29-384 44-397 (406)
162 PRK08088 4-aminobutyrate amino 100.0 1.1E-27 2.4E-32 226.7 30.8 347 27-384 38-424 (425)
163 PRK05093 argD bifunctional N-s 100.0 4.5E-27 9.8E-32 221.6 33.1 339 27-384 37-401 (403)
164 PRK00011 glyA serine hydroxyme 100.0 7.9E-27 1.7E-31 221.3 35.0 358 9-383 4-389 (416)
165 PTZ00125 ornithine aminotransf 100.0 4.3E-27 9.3E-32 222.1 32.0 343 27-386 28-398 (400)
166 COG0075 Serine-pyruvate aminot 100.0 1.3E-26 2.8E-31 208.3 32.8 330 41-389 13-369 (383)
167 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.1E-26 2.3E-31 217.6 34.0 315 44-379 32-372 (373)
168 cd06450 DOPA_deC_like DOPA dec 100.0 9.2E-28 2E-32 222.5 26.2 302 46-379 13-344 (345)
169 PRK12381 bifunctional succinyl 100.0 1.1E-26 2.4E-31 218.7 32.9 342 27-388 36-404 (406)
170 PRK00854 rocD ornithine--oxo-a 100.0 4.1E-27 8.9E-32 222.2 29.2 334 27-382 38-400 (401)
171 PRK04260 acetylornithine amino 100.0 6.7E-27 1.5E-31 218.5 30.1 333 27-380 26-374 (375)
172 PRK00451 glycine dehydrogenase 100.0 1.1E-26 2.3E-31 222.3 31.7 341 17-381 51-446 (447)
173 PRK07049 methionine gamma-lyas 100.0 9.8E-27 2.1E-31 218.7 30.1 289 66-382 81-425 (427)
174 PRK14012 cysteine desulfurase; 100.0 2.3E-26 5.1E-31 217.0 32.0 331 33-385 5-381 (404)
175 TIGR00713 hemL glutamate-1-sem 100.0 1.1E-26 2.4E-31 220.5 28.9 336 27-383 45-422 (423)
176 PLN02651 cysteine desulfurase 100.0 6.2E-27 1.3E-31 218.0 26.6 317 35-371 3-364 (364)
177 TIGR01437 selA_rel uncharacter 100.0 3.1E-26 6.7E-31 212.0 30.8 319 31-380 9-362 (363)
178 TIGR03246 arg_catab_astC succi 100.0 8.1E-26 1.8E-30 212.2 33.9 339 27-384 32-396 (397)
179 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.2E-26 4.7E-31 217.3 30.1 345 27-382 30-419 (420)
180 PLN00144 acetylornithine trans 100.0 3.2E-26 6.9E-31 213.2 30.3 340 27-384 12-381 (382)
181 PRK09792 4-aminobutyrate trans 100.0 5.1E-26 1.1E-30 214.3 31.3 344 27-382 37-420 (421)
182 PRK08360 4-aminobutyrate amino 100.0 1.1E-25 2.3E-30 212.7 33.4 354 27-394 38-436 (443)
183 PRK06918 4-aminobutyrate amino 100.0 1E-25 2.2E-30 214.4 33.4 352 27-388 51-448 (451)
184 PLN03227 serine palmitoyltrans 100.0 5.2E-26 1.1E-30 212.5 30.8 331 34-385 2-384 (392)
185 PRK06234 methionine gamma-lyas 100.0 5.3E-26 1.1E-30 212.8 30.5 287 66-384 62-398 (400)
186 PRK04612 argD acetylornithine 100.0 2E-25 4.3E-30 208.9 33.5 345 27-387 37-407 (408)
187 PRK06777 4-aminobutyrate amino 100.0 1.4E-25 3.1E-30 211.3 32.6 344 27-382 37-420 (421)
188 PF00266 Aminotran_5: Aminotra 100.0 7E-26 1.5E-30 211.7 29.5 314 43-373 10-371 (371)
189 PRK07495 4-aminobutyrate amino 100.0 3.9E-25 8.4E-30 208.0 33.0 348 27-385 37-423 (425)
190 COG1448 TyrB Aspartate/tyrosin 100.0 1.9E-25 4.1E-30 195.2 27.3 343 19-380 13-395 (396)
191 PLN02624 ornithine-delta-amino 100.0 3.7E-25 7.9E-30 211.1 31.9 343 27-385 72-446 (474)
192 PLN02242 methionine gamma-lyas 99.9 2.2E-25 4.7E-30 208.8 28.8 285 67-384 75-416 (418)
193 PRK04366 glycine dehydrogenase 99.9 1.1E-24 2.3E-29 208.5 33.8 358 17-387 53-452 (481)
194 PF12897 Aminotran_MocR: Alani 99.9 4E-25 8.6E-30 193.5 27.5 348 19-384 13-416 (425)
195 PRK07505 hypothetical protein; 99.9 9.6E-25 2.1E-29 205.8 31.9 330 27-383 43-399 (402)
196 PRK06767 methionine gamma-lyas 99.9 8E-25 1.7E-29 204.2 30.4 286 66-383 59-385 (386)
197 COG0156 BioF 7-keto-8-aminopel 99.9 1.7E-24 3.7E-29 196.6 31.4 326 28-380 37-387 (388)
198 PRK08133 O-succinylhomoserine 99.9 1.5E-24 3.3E-29 202.3 31.7 279 68-382 61-389 (390)
199 PRK08117 4-aminobutyrate amino 99.9 2E-24 4.3E-29 205.0 32.1 346 27-385 40-431 (433)
200 PRK08247 cystathionine gamma-s 99.9 4.8E-25 1E-29 204.5 27.3 280 67-383 51-364 (366)
201 cd00614 CGS_like CGS_like: Cys 99.9 2.9E-24 6.3E-29 199.7 32.2 282 66-381 38-368 (369)
202 TIGR03235 DNA_S_dndA cysteine 99.9 1.6E-25 3.4E-30 207.9 23.7 307 43-369 9-344 (353)
203 COG0160 GabT 4-aminobutyrate a 99.9 1.8E-24 3.8E-29 198.4 29.6 346 27-384 53-446 (447)
204 PRK06058 4-aminobutyrate amino 99.9 2.8E-24 6E-29 203.9 31.8 345 27-383 53-442 (443)
205 TIGR02080 O_succ_thio_ly O-suc 99.9 1.5E-24 3.2E-29 201.5 28.9 284 66-383 49-381 (382)
206 PRK08045 cystathionine gamma-s 99.9 2.3E-24 5.1E-29 200.2 30.2 287 66-386 50-385 (386)
207 COG2008 GLY1 Threonine aldolas 99.9 2.7E-24 5.8E-29 187.7 28.4 321 39-381 7-341 (342)
208 TIGR01885 Orn_aminotrans ornit 99.9 1.9E-24 4E-29 203.8 29.8 330 27-381 34-400 (401)
209 PRK05964 adenosylmethionine--8 99.9 6.4E-24 1.4E-28 200.9 32.7 344 27-384 39-423 (423)
210 PRK08249 cystathionine gamma-s 99.9 1.9E-24 4.1E-29 201.6 28.6 285 66-385 62-395 (398)
211 PRK08861 cystathionine gamma-s 99.9 3.3E-24 7.2E-29 198.5 29.4 287 66-386 51-386 (388)
212 PRK06460 hypothetical protein; 99.9 6.9E-24 1.5E-28 196.9 31.3 283 67-384 44-375 (376)
213 PRK07504 O-succinylhomoserine 99.9 4.7E-24 1E-28 199.4 30.3 284 66-384 63-396 (398)
214 PRK08776 cystathionine gamma-s 99.9 5.8E-24 1.3E-28 198.6 30.9 281 74-384 62-391 (405)
215 PRK07503 methionine gamma-lyas 99.9 4.7E-24 1E-28 199.7 29.4 286 66-386 63-399 (403)
216 PRK13580 serine hydroxymethylt 99.9 1.5E-23 3.2E-28 195.0 31.9 355 13-384 32-446 (493)
217 PLN02955 8-amino-7-oxononanoat 99.9 2.4E-23 5.1E-28 193.5 33.1 326 29-387 101-465 (476)
218 PRK07810 O-succinylhomoserine 99.9 1.7E-23 3.6E-28 195.6 32.3 285 66-381 68-402 (403)
219 PRK09028 cystathionine beta-ly 99.9 1.5E-23 3.2E-28 193.9 31.4 290 62-385 53-389 (394)
220 PRK07582 cystathionine gamma-l 99.9 1.2E-23 2.5E-28 194.9 30.7 278 66-383 49-365 (366)
221 PRK07811 cystathionine gamma-s 99.9 7.5E-24 1.6E-28 197.5 29.0 283 66-382 59-387 (388)
222 PRK08574 cystathionine gamma-s 99.9 6.8E-24 1.5E-28 197.3 28.3 283 66-383 51-384 (385)
223 TIGR01814 kynureninase kynuren 99.9 2.2E-23 4.7E-28 196.9 32.1 328 30-381 26-405 (406)
224 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.2E-23 2.6E-28 195.9 29.6 215 66-308 52-272 (380)
225 PRK13034 serine hydroxymethylt 99.9 8E-23 1.7E-27 192.4 35.3 360 7-384 5-393 (416)
226 TIGR01328 met_gam_lyase methio 99.9 1.4E-23 3E-28 195.8 29.6 283 66-383 57-390 (391)
227 PRK00062 glutamate-1-semialdeh 99.9 8.7E-24 1.9E-28 199.9 28.7 339 27-384 47-425 (426)
228 PRK07050 cystathionine beta-ly 99.9 1.3E-23 2.9E-28 195.9 29.3 287 67-384 64-392 (394)
229 TIGR02407 ectoine_ectB diamino 99.9 1.3E-23 2.8E-28 197.5 29.4 346 27-383 32-412 (412)
230 PRK08593 4-aminobutyrate amino 99.9 2.6E-23 5.6E-28 196.9 31.2 352 27-391 39-437 (445)
231 PTZ00094 serine hydroxymethylt 99.9 4.6E-23 1E-27 196.4 32.8 356 11-384 15-409 (452)
232 TIGR03372 putres_am_tran putre 99.9 3.8E-23 8.3E-28 194.3 31.2 343 27-381 72-442 (442)
233 TIGR02379 ECA_wecE TDP-4-keto- 99.9 8.6E-23 1.9E-27 189.4 33.1 308 45-381 10-375 (376)
234 PRK05937 8-amino-7-oxononanoat 99.9 1.3E-22 2.8E-27 189.1 34.0 328 30-387 4-354 (370)
235 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.1E-22 2.3E-27 189.8 33.1 310 45-381 13-377 (379)
236 PRK09264 diaminobutyrate--2-ox 99.9 3.3E-23 7.2E-28 195.7 29.7 346 27-386 36-419 (425)
237 PRK11522 putrescine--2-oxoglut 99.9 9.2E-23 2E-27 193.0 32.2 348 27-386 79-454 (459)
238 PRK07482 hypothetical protein; 99.9 1.3E-22 2.9E-27 192.7 33.0 347 27-385 47-456 (461)
239 PRK03715 argD acetylornithine 99.9 1.3E-22 2.7E-27 189.6 31.8 336 27-384 33-394 (395)
240 TIGR00709 dat 2,4-diaminobutyr 99.9 1E-22 2.2E-27 193.0 31.6 348 27-386 36-438 (442)
241 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-22 3.2E-27 188.2 31.9 301 50-378 3-352 (352)
242 TIGR01329 cysta_beta_ly_E cyst 99.9 8.5E-23 1.8E-27 189.8 29.5 281 74-383 49-375 (378)
243 PRK05968 hypothetical protein; 99.9 8.6E-23 1.9E-27 190.5 29.5 283 68-384 63-387 (389)
244 PRK07269 cystathionine gamma-s 99.9 4.1E-23 8.9E-28 190.4 26.6 285 66-382 52-363 (364)
245 KOG1549 Cysteine desulfurase N 99.9 5.6E-23 1.2E-27 184.0 25.6 343 27-386 39-421 (428)
246 PRK06541 hypothetical protein; 99.9 4.1E-22 8.9E-27 189.1 32.6 346 27-385 49-457 (460)
247 PRK05967 cystathionine beta-ly 99.9 4.1E-22 8.8E-27 184.0 31.4 294 64-384 56-392 (395)
248 PRK08064 cystathionine beta-ly 99.9 5.9E-22 1.3E-26 185.0 32.2 281 69-385 55-384 (390)
249 TIGR01324 cysta_beta_ly_B cyst 99.9 1.6E-22 3.4E-27 187.2 28.1 282 70-383 52-376 (377)
250 PRK08248 O-acetylhomoserine am 99.9 4E-22 8.8E-27 187.4 30.5 286 67-384 63-428 (431)
251 COG0112 GlyA Glycine/serine hy 99.9 1.6E-21 3.5E-26 171.2 31.8 358 11-384 7-391 (413)
252 COG0001 HemL Glutamate-1-semia 99.9 4.6E-22 9.9E-27 179.1 29.0 339 27-386 50-431 (432)
253 PRK07678 aminotransferase; Val 99.9 8.9E-22 1.9E-26 186.7 32.8 347 27-384 44-450 (451)
254 TIGR01788 Glu-decarb-GAD gluta 99.9 8.5E-22 1.8E-26 184.4 32.1 330 43-384 52-430 (431)
255 PRK06062 hypothetical protein; 99.9 6.8E-22 1.5E-26 187.3 31.7 344 27-385 50-447 (451)
256 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.2E-21 6.8E-26 179.9 34.6 307 45-381 10-374 (375)
257 PRK06943 adenosylmethionine--8 99.9 1.2E-21 2.7E-26 185.5 32.1 344 27-385 51-448 (453)
258 PRK06702 O-acetylhomoserine am 99.9 8.7E-22 1.9E-26 183.6 30.5 283 68-383 61-424 (432)
259 PRK07986 adenosylmethionine--8 99.9 9.8E-22 2.1E-26 184.6 30.9 339 27-383 40-423 (428)
260 PRK06082 4-aminobutyrate amino 99.9 1.7E-21 3.6E-26 184.9 32.7 346 27-386 69-454 (459)
261 PLN02509 cystathionine beta-ly 99.9 6.4E-22 1.4E-26 186.2 29.0 289 61-383 124-461 (464)
262 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4E-22 8.8E-27 187.7 27.8 159 66-245 55-218 (418)
263 PLN02760 4-aminobutyrate:pyruv 99.9 1.9E-21 4.2E-26 185.8 32.2 344 27-385 86-493 (504)
264 PRK05965 hypothetical protein; 99.9 3.1E-21 6.6E-26 183.3 33.2 347 27-386 43-450 (459)
265 KOG1368 Threonine aldolase [Am 99.9 7.4E-22 1.6E-26 166.0 25.3 329 31-384 22-370 (384)
266 PRK07030 adenosylmethionine--8 99.9 3.3E-21 7.1E-26 183.1 32.9 344 27-385 44-448 (466)
267 TIGR03588 PseC UDP-4-keto-6-de 99.9 5.5E-21 1.2E-25 179.0 34.1 309 45-381 9-380 (380)
268 PRK06105 aminotransferase; Pro 99.9 1.9E-21 4.1E-26 184.8 30.9 347 27-387 45-453 (460)
269 PRK06917 hypothetical protein; 99.9 5.2E-21 1.1E-25 181.1 33.7 353 27-388 28-442 (447)
270 PRK05639 4-aminobutyrate amino 99.9 3.4E-21 7.4E-26 182.5 32.4 348 27-386 50-446 (457)
271 PRK07671 cystathionine beta-ly 99.9 1.2E-21 2.6E-26 181.9 28.7 213 68-308 50-268 (377)
272 PRK08742 adenosylmethionine--8 99.9 2.5E-21 5.4E-26 183.7 31.2 345 27-385 61-469 (472)
273 PRK06173 adenosylmethionine--8 99.9 2.8E-21 6E-26 181.8 31.0 340 27-385 41-427 (429)
274 PRK07483 hypothetical protein; 99.9 6.3E-21 1.4E-25 180.4 33.6 351 27-386 27-440 (443)
275 TIGR01364 serC_1 phosphoserine 99.9 2E-21 4.3E-26 178.4 29.3 313 43-382 2-347 (349)
276 PRK06084 O-acetylhomoserine am 99.9 1.3E-21 2.9E-26 183.7 28.6 286 67-384 57-423 (425)
277 PLN02724 Molybdenum cofactor s 99.9 2.7E-21 5.8E-26 195.6 32.7 347 30-384 33-489 (805)
278 PRK13360 omega amino acid--pyr 99.9 5.4E-21 1.2E-25 180.7 32.3 342 27-384 43-441 (442)
279 PRK05769 4-aminobutyrate amino 99.9 3.6E-21 7.7E-26 182.1 31.0 339 27-384 51-440 (441)
280 PRK02769 histidine decarboxyla 99.9 7.5E-21 1.6E-25 175.7 32.5 289 69-384 62-373 (380)
281 PRK06916 adenosylmethionine--8 99.9 3E-21 6.5E-26 183.4 30.2 345 27-386 53-458 (460)
282 PRK05939 hypothetical protein; 99.9 5.7E-21 1.2E-25 178.1 31.5 278 72-382 51-395 (397)
283 PRK07480 putative aminotransfe 99.9 4E-21 8.7E-26 182.2 31.0 346 27-386 47-451 (456)
284 PRK06938 diaminobutyrate--2-ox 99.9 4.7E-21 1E-25 181.9 31.3 347 27-385 60-462 (464)
285 PRK07481 hypothetical protein; 99.9 6.6E-21 1.4E-25 180.7 32.0 346 27-385 39-447 (449)
286 PRK06176 cystathionine gamma-s 99.9 6E-21 1.3E-25 177.2 31.0 278 70-383 52-378 (380)
287 PRK03080 phosphoserine aminotr 99.9 1.7E-21 3.6E-26 181.7 27.4 324 32-385 13-375 (378)
288 PRK05355 3-phosphoserine/phosp 99.9 2.7E-21 5.8E-26 178.4 27.8 317 41-383 11-358 (360)
289 PRK04013 argD acetylornithine/ 99.9 3.4E-21 7.3E-26 177.0 27.9 323 27-385 21-362 (364)
290 PRK05630 adenosylmethionine--8 99.9 7.9E-21 1.7E-25 178.6 30.8 338 27-383 37-420 (422)
291 PRK07046 aminotransferase; Val 99.9 2E-20 4.3E-25 177.1 33.3 335 27-385 72-452 (453)
292 PLN02271 serine hydroxymethylt 99.9 1.8E-20 3.8E-25 175.1 32.3 356 12-382 130-539 (586)
293 KOG2862 Alanine-glyoxylate ami 99.9 1.5E-20 3.3E-25 159.1 28.8 323 43-384 27-383 (385)
294 PRK09221 beta alanine--pyruvat 99.9 8.7E-21 1.9E-25 179.5 30.7 342 27-384 46-444 (445)
295 PLN02482 glutamate-1-semialdeh 99.9 9.9E-21 2.1E-25 179.3 30.7 338 27-383 96-473 (474)
296 PRK12403 putative aminotransfe 99.9 1.8E-20 4E-25 178.0 32.6 344 27-386 51-455 (460)
297 PLN03226 serine hydroxymethylt 99.9 2.3E-20 4.9E-25 177.2 33.0 361 10-384 14-420 (475)
298 PRK07036 hypothetical protein; 99.9 2.1E-20 4.6E-25 177.7 32.5 345 27-386 48-455 (466)
299 cd00615 Orn_deC_like Ornithine 99.9 1.3E-21 2.8E-26 176.5 22.7 226 66-304 57-293 (294)
300 PLN02414 glycine dehydrogenase 99.9 1.8E-20 3.9E-25 188.5 33.1 313 61-386 554-910 (993)
301 PRK06931 diaminobutyrate--2-ox 99.9 3.1E-20 6.7E-25 176.3 32.7 348 27-386 55-457 (459)
302 COG0399 WecE Predicted pyridox 99.9 6E-20 1.3E-24 165.8 32.7 309 45-383 14-373 (374)
303 PRK12389 glutamate-1-semialdeh 99.9 1.7E-20 3.6E-25 177.3 30.7 338 27-383 50-427 (428)
304 PRK08114 cystathionine beta-ly 99.9 2.5E-20 5.5E-25 171.9 30.7 284 72-384 62-394 (395)
305 PF00464 SHMT: Serine hydroxym 99.9 4.2E-21 9.2E-26 174.9 25.1 347 15-375 5-397 (399)
306 PLN03032 serine decarboxylase; 99.9 3.6E-20 7.7E-25 169.9 31.2 310 45-379 36-372 (374)
307 KOG1360 5-aminolevulinate synt 99.9 8.8E-21 1.9E-25 165.5 25.5 319 43-386 185-527 (570)
308 cd00611 PSAT_like Phosphoserin 99.9 4.2E-21 9E-26 177.6 25.3 316 40-380 6-353 (355)
309 PRK08134 O-acetylhomoserine am 99.9 3.7E-20 8E-25 174.1 31.4 287 68-386 64-430 (433)
310 PRK06148 hypothetical protein; 99.9 2.8E-20 6.1E-25 191.6 32.8 346 27-385 621-1012(1013)
311 PRK00615 glutamate-1-semialdeh 99.9 2.4E-20 5.1E-25 175.4 29.5 342 27-385 50-430 (433)
312 TIGR00508 bioA adenosylmethion 99.9 2.2E-20 4.8E-25 176.1 29.0 338 27-383 42-426 (427)
313 PRK07812 O-acetylhomoserine am 99.9 4.1E-20 8.9E-25 173.5 29.5 286 69-385 70-433 (436)
314 COG0161 BioA Adenosylmethionin 99.9 5.1E-20 1.1E-24 168.0 28.5 345 28-386 42-446 (449)
315 PLN02880 tyrosine decarboxylas 99.9 7.9E-20 1.7E-24 174.4 30.9 335 45-386 95-487 (490)
316 PRK15407 lipopolysaccharide bi 99.9 7.3E-19 1.6E-23 166.0 36.5 323 30-382 23-435 (438)
317 PLN02590 probable tyrosine dec 99.9 2.8E-19 6.1E-24 170.5 33.1 336 44-387 142-536 (539)
318 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 1.8E-19 3.8E-24 166.0 30.5 290 62-382 47-386 (386)
319 PRK05994 O-acetylhomoserine am 99.9 1E-19 2.2E-24 171.6 29.3 283 69-383 64-426 (427)
320 PRK06149 hypothetical protein; 99.9 1.9E-19 4.1E-24 185.5 32.3 344 27-383 582-970 (972)
321 PRK08297 L-lysine aminotransfe 99.9 2.5E-19 5.4E-24 169.5 30.0 342 28-384 43-442 (443)
322 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5.4E-19 1.2E-23 164.2 29.9 304 46-378 5-363 (363)
323 TIGR00699 GABAtrns_euk 4-amino 99.9 1.2E-19 2.7E-24 170.8 25.8 338 27-381 55-464 (464)
324 TIGR03531 selenium_SpcS O-phos 99.9 4.8E-19 1E-23 165.0 29.0 302 70-381 103-444 (444)
325 PRK05613 O-acetylhomoserine am 99.9 3.1E-19 6.8E-24 167.6 27.5 282 71-383 72-436 (437)
326 TIGR02618 tyr_phenol_ly tyrosi 99.9 2.8E-18 6E-23 157.7 32.2 321 46-384 50-427 (450)
327 COG0626 MetC Cystathionine bet 99.9 1E-18 2.2E-23 158.8 28.9 281 73-384 64-395 (396)
328 TIGR01366 serC_3 phosphoserine 99.9 7.9E-19 1.7E-23 162.4 27.1 316 41-383 11-360 (361)
329 KOG1401 Acetylornithine aminot 99.8 1.1E-18 2.4E-23 153.7 25.5 340 27-385 53-432 (433)
330 KOG1404 Alanine-glyoxylate ami 99.8 8.6E-19 1.9E-23 153.2 24.6 337 27-377 47-432 (442)
331 PRK06434 cystathionine gamma-l 99.8 3.6E-18 7.9E-23 157.8 29.5 277 67-382 63-383 (384)
332 TIGR03251 LAT_fam L-lysine 6-t 99.8 2.5E-18 5.4E-23 162.6 28.1 338 28-379 36-430 (431)
333 PLN02263 serine decarboxylase 99.8 5.3E-17 1.2E-21 151.1 35.8 293 69-386 130-446 (470)
334 PRK13237 tyrosine phenol-lyase 99.8 3.2E-17 7E-22 151.1 33.4 306 63-384 73-434 (460)
335 KOG1359 Glycine C-acetyltransf 99.8 3.3E-18 7.1E-23 143.9 23.4 329 30-384 67-413 (417)
336 PLN02974 adenosylmethionine-8- 99.8 1.8E-17 3.9E-22 165.1 32.2 339 31-381 366-816 (817)
337 PRK04311 selenocysteine syntha 99.8 2.3E-17 5.1E-22 155.5 31.2 312 44-382 98-463 (464)
338 KOG0053 Cystathionine beta-lya 99.8 8.3E-18 1.8E-22 150.8 26.4 214 72-308 77-296 (409)
339 COG2873 MET17 O-acetylhomoseri 99.8 7.3E-18 1.6E-22 146.8 24.3 289 67-383 61-425 (426)
340 PRK05367 glycine dehydrogenase 99.8 4.3E-17 9.3E-22 165.1 33.0 313 61-386 528-878 (954)
341 KOG1412 Aspartate aminotransfe 99.8 2.9E-17 6.3E-22 139.3 26.4 358 13-386 11-408 (410)
342 COG1103 Archaea-specific pyrid 99.8 6.5E-17 1.4E-21 134.7 27.9 332 30-384 15-381 (382)
343 PRK06209 glutamate-1-semialdeh 99.8 1.5E-17 3.4E-22 157.2 26.6 328 27-385 45-407 (431)
344 TIGR03799 NOD_PanD_pyr putativ 99.8 3.7E-17 8E-22 156.4 28.8 308 58-375 115-517 (522)
345 PRK12566 glycine dehydrogenase 99.8 1.3E-16 2.8E-21 157.9 31.7 310 61-385 529-878 (954)
346 TIGR00474 selA seryl-tRNA(sec) 99.8 2.1E-16 4.6E-21 148.6 31.5 310 43-377 92-453 (454)
347 PF04864 Alliinase_C: Allinase 99.8 5.5E-19 1.2E-23 153.2 12.9 282 70-379 45-361 (363)
348 PRK15029 arginine decarboxylas 99.8 6.4E-16 1.4E-20 151.9 35.4 163 76-245 209-400 (755)
349 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 5.5E-18 1.2E-22 155.3 19.5 232 70-312 68-326 (417)
350 TIGR01365 serC_2 phosphoserine 99.8 8.1E-17 1.8E-21 147.8 27.2 313 41-382 11-372 (374)
351 COG0076 GadB Glutamate decarbo 99.8 1.1E-16 2.5E-21 150.3 28.5 297 43-348 73-402 (460)
352 KOG1411 Aspartate aminotransfe 99.8 1.8E-17 3.8E-22 142.5 20.6 350 16-381 36-423 (427)
353 PLN02452 phosphoserine transam 99.8 1.2E-16 2.6E-21 146.7 27.3 323 32-383 8-363 (365)
354 TIGR00461 gcvP glycine dehydro 99.8 5.7E-16 1.2E-20 154.4 33.9 313 61-386 516-870 (939)
355 KOG1402 Ornithine aminotransfe 99.8 1.8E-17 3.9E-22 141.7 19.5 331 26-382 55-426 (427)
356 cd01494 AAT_I Aspartate aminot 99.8 1.2E-17 2.6E-22 138.3 17.5 164 71-245 3-170 (170)
357 PF01212 Beta_elim_lyase: Beta 99.8 1.1E-18 2.4E-23 154.8 10.6 246 44-308 7-272 (290)
358 PF00202 Aminotran_3: Aminotra 99.8 1.1E-17 2.4E-22 153.3 14.4 289 27-325 13-338 (339)
359 PRK12462 phosphoserine aminotr 99.8 1.2E-15 2.7E-20 138.4 26.3 323 32-383 5-362 (364)
360 PLN02414 glycine dehydrogenase 99.7 9.1E-15 2E-19 147.7 30.8 330 17-378 89-464 (993)
361 PRK13578 ornithine decarboxyla 99.7 3.4E-14 7.4E-19 138.4 32.6 162 76-245 178-369 (720)
362 KOG1357 Serine palmitoyltransf 99.7 1.6E-15 3.5E-20 135.1 20.0 316 43-381 155-500 (519)
363 PRK15400 lysine decarboxylase 99.7 1.3E-13 2.9E-18 134.2 33.1 292 76-383 199-559 (714)
364 PRK05367 glycine dehydrogenase 99.7 4.4E-14 9.5E-19 143.5 29.6 329 17-378 62-437 (954)
365 PRK15399 lysine decarboxylase 99.7 9.6E-13 2.1E-17 128.3 35.8 290 77-383 200-559 (713)
366 PF00282 Pyridoxal_deC: Pyrido 99.7 1.5E-14 3.2E-19 133.8 22.2 273 44-324 51-372 (373)
367 COG1982 LdcC Arginine/lysine/o 99.7 3.8E-13 8.3E-18 125.9 30.3 297 70-383 72-404 (557)
368 KOG1358 Serine palmitoyltransf 99.7 2.1E-14 4.6E-19 125.8 19.9 336 27-384 91-466 (467)
369 TIGR02617 tnaA_trp_ase tryptop 99.6 3.7E-13 7.9E-18 122.9 28.0 330 32-384 43-442 (467)
370 KOG2467 Glycine/serine hydroxy 99.6 3.6E-13 7.9E-18 117.1 26.0 357 11-381 21-424 (477)
371 TIGR03811 tyr_de_CO2_Ent tyros 99.6 6.6E-12 1.4E-16 121.6 34.4 340 43-387 94-606 (608)
372 COG3844 Kynureninase [Amino ac 99.6 1.9E-12 4.1E-17 111.2 25.5 346 17-385 17-404 (407)
373 COG1003 GcvP Glycine cleavage 99.6 3.2E-12 7E-17 114.1 27.1 310 61-387 95-451 (496)
374 KOG1403 Predicted alanine-glyo 99.6 3.3E-13 7E-18 114.4 17.7 345 28-385 45-439 (452)
375 TIGR00461 gcvP glycine dehydro 99.6 8.3E-12 1.8E-16 125.1 29.8 331 17-378 50-426 (939)
376 PF02347 GDC-P: Glycine cleava 99.5 6.4E-12 1.4E-16 115.5 22.1 332 17-377 51-429 (429)
377 KOG1383 Glutamate decarboxylas 99.5 1.9E-11 4E-16 110.2 24.3 336 36-387 85-450 (491)
378 COG1921 SelA Selenocysteine sy 99.4 2.1E-10 4.4E-15 103.2 21.4 219 44-280 39-268 (395)
379 COG0403 GcvP Glycine cleavage 99.3 7E-09 1.5E-13 93.1 29.8 338 17-380 61-447 (450)
380 PF06838 Met_gamma_lyase: Meth 99.3 6E-10 1.3E-14 98.2 22.1 196 46-257 27-247 (403)
381 KOG0629 Glutamate decarboxylas 99.3 1.5E-09 3.4E-14 96.8 21.5 315 55-380 124-506 (510)
382 PLN02994 1-aminocyclopropane-1 99.2 1.4E-10 3.1E-15 92.5 11.4 90 30-125 43-153 (153)
383 KOG0628 Aromatic-L-amino-acid/ 99.2 1.7E-08 3.7E-13 91.2 24.7 318 63-387 104-475 (511)
384 PF03841 SelA: L-seryl-tRNA se 99.2 6.8E-11 1.5E-15 105.4 7.2 247 44-305 18-295 (367)
385 PRK12566 glycine dehydrogenase 99.1 1.1E-07 2.4E-12 95.4 27.5 327 17-378 65-439 (954)
386 COG1932 SerC Phosphoserine ami 99.1 1E-07 2.2E-12 84.3 23.9 326 32-383 6-363 (365)
387 COG3033 TnaA Tryptophanase [Am 99.0 1.1E-06 2.5E-11 77.2 27.7 320 44-383 60-444 (471)
388 PF05889 SLA_LP_auto_ag: Solub 99.0 1.1E-07 2.3E-12 85.9 20.1 300 74-382 58-389 (389)
389 COG4100 Cystathionine beta-lya 98.8 1.7E-06 3.7E-11 74.3 21.0 179 61-255 57-256 (416)
390 KOG3846 L-kynurenine hydrolase 98.8 3.5E-06 7.5E-11 72.6 22.5 339 29-384 65-462 (465)
391 KOG1405 4-aminobutyrate aminot 98.7 1.4E-06 3E-11 76.5 17.6 214 152-383 255-483 (484)
392 KOG2040 Glycine dehydrogenase 98.7 7.5E-06 1.6E-10 77.4 22.7 308 61-385 568-920 (1001)
393 KOG2040 Glycine dehydrogenase 98.0 0.0025 5.5E-08 60.9 22.4 312 38-378 126-478 (1001)
394 KOG2790 Phosphoserine aminotra 97.7 0.0024 5.3E-08 54.9 14.7 329 29-383 5-368 (370)
395 KOG3843 Predicted serine hydro 97.7 0.00042 9E-09 58.8 9.5 280 101-387 88-406 (432)
396 PLN02672 methionine S-methyltr 97.2 0.024 5.2E-07 59.3 17.5 226 19-260 372-628 (1082)
397 COG2102 Predicted ATPases of P 87.0 8.6 0.00019 32.6 9.6 100 91-201 3-116 (223)
398 COG0159 TrpA Tryptophan syntha 86.8 21 0.00046 31.3 16.4 158 22-196 37-203 (265)
399 KOG2741 Dimeric dihydrodiol de 86.3 7 0.00015 35.5 9.3 114 75-206 16-131 (351)
400 PF05368 NmrA: NmrA-like famil 83.5 16 0.00034 31.4 10.4 94 95-202 5-99 (233)
401 TIGR00262 trpA tryptophan synt 82.2 35 0.00075 30.1 17.9 164 22-203 30-204 (256)
402 COG1105 FruK Fructose-1-phosph 79.6 25 0.00054 31.8 10.2 57 147-206 108-168 (310)
403 PLN02591 tryptophan synthase 79.5 42 0.00092 29.4 17.0 166 19-202 19-194 (250)
404 KOG1465 Translation initiation 78.7 48 0.001 29.6 13.6 134 61-206 118-273 (353)
405 smart00642 Aamy Alpha-amylase 78.5 7.4 0.00016 31.7 6.1 25 182-206 68-92 (166)
406 COG0352 ThiE Thiamine monophos 78.2 14 0.0003 31.4 7.8 87 152-245 24-113 (211)
407 COG0373 HemA Glutamyl-tRNA red 78.0 30 0.00064 32.7 10.5 111 72-203 160-272 (414)
408 TIGR01470 cysG_Nterm siroheme 73.7 54 0.0012 27.7 10.4 97 87-206 7-104 (205)
409 cd06568 GH20_SpHex_like A subg 71.2 11 0.00023 34.7 5.9 70 128-203 25-94 (329)
410 PF00290 Trp_syntA: Tryptophan 68.9 82 0.0018 27.8 15.6 161 19-196 27-196 (259)
411 CHL00200 trpA tryptophan synth 66.7 93 0.002 27.5 16.4 164 22-203 35-208 (263)
412 TIGR00290 MJ0570_dom MJ0570-re 65.3 89 0.0019 26.8 10.4 98 92-200 4-114 (223)
413 cd02742 GH20_hexosaminidase Be 65.2 16 0.00035 33.1 5.7 69 128-203 23-91 (303)
414 PF01902 ATP_bind_4: ATP-bindi 65.0 53 0.0011 28.1 8.5 98 92-201 4-115 (218)
415 PRK11889 flhF flagellar biosyn 65.0 1.3E+02 0.0028 28.6 11.5 124 71-206 217-362 (436)
416 PF01408 GFO_IDH_MocA: Oxidore 64.7 29 0.00063 26.0 6.4 70 122-203 50-119 (120)
417 COG1184 GCD2 Translation initi 64.4 1.1E+02 0.0024 27.6 11.2 105 89-206 119-231 (301)
418 PRK10886 DnaA initiator-associ 63.4 42 0.0009 28.2 7.4 17 186-202 125-141 (196)
419 COG0296 GlgB 1,4-alpha-glucan 63.2 11 0.00023 37.7 4.3 36 176-211 206-243 (628)
420 PF14258 DUF4350: Domain of un 62.7 37 0.00081 22.7 5.9 61 125-203 9-70 (70)
421 PRK08057 cobalt-precorrin-6x r 62.5 45 0.00097 29.2 7.7 91 90-199 3-94 (248)
422 TIGR00524 eIF-2B_rel eIF-2B al 61.1 1.3E+02 0.0028 27.3 11.5 107 89-206 118-241 (303)
423 PRK10595 SOS cell division inh 61.1 88 0.0019 25.4 11.5 99 91-200 30-137 (164)
424 PF13460 NAD_binding_10: NADH( 60.7 89 0.0019 25.3 9.5 89 93-198 2-90 (183)
425 PRK04296 thymidine kinase; Pro 60.3 58 0.0012 27.1 7.9 95 99-206 17-115 (190)
426 PF08543 Phos_pyr_kin: Phospho 59.9 21 0.00046 31.1 5.4 46 151-203 44-92 (246)
427 TIGR02990 ectoine_eutA ectoine 59.2 1.2E+02 0.0026 26.4 10.4 99 97-206 106-214 (239)
428 PRK02261 methylaspartate mutas 58.6 87 0.0019 24.5 10.0 57 128-196 25-81 (137)
429 PF02571 CbiJ: Precorrin-6x re 58.3 39 0.00084 29.6 6.6 93 91-200 2-96 (249)
430 TIGR03581 EF_0839 conserved hy 57.3 1.2E+02 0.0026 25.8 11.1 162 31-206 26-211 (236)
431 cd02071 MM_CoA_mut_B12_BD meth 56.9 85 0.0018 23.8 7.8 57 128-196 21-77 (122)
432 cd06570 GH20_chitobiase-like_1 56.8 25 0.00054 32.0 5.4 63 128-203 25-87 (311)
433 COG1435 Tdk Thymidine kinase [ 56.2 65 0.0014 27.0 7.1 96 96-203 15-116 (201)
434 TIGR00064 ftsY signal recognit 56.0 76 0.0016 28.2 8.2 97 102-206 89-202 (272)
435 cd06562 GH20_HexA_HexB-like Be 56.0 22 0.00048 32.9 5.0 65 128-203 25-89 (348)
436 TIGR03772 anch_rpt_subst ancho 55.5 1.1E+02 0.0023 29.9 9.6 76 113-201 371-449 (479)
437 PF02310 B12-binding: B12 bind 55.4 81 0.0018 23.6 7.4 67 128-206 22-90 (121)
438 TIGR02012 tigrfam_recA protein 54.9 48 0.001 30.3 6.9 35 318-353 254-288 (321)
439 cd02067 B12-binding B12 bindin 54.8 89 0.0019 23.4 8.2 57 128-196 21-77 (119)
440 PRK13125 trpA tryptophan synth 54.0 1.5E+02 0.0032 25.8 14.8 163 17-203 18-191 (244)
441 KOG4589 Cell division protein 53.9 1E+02 0.0022 25.7 7.7 85 109-195 66-165 (232)
442 TIGR00097 HMP-P_kinase phospho 52.8 34 0.00075 29.9 5.6 48 151-206 51-103 (254)
443 cd00951 KDGDH 5-dehydro-4-deox 52.7 72 0.0016 28.6 7.7 58 142-202 11-74 (289)
444 COG0552 FtsY Signal recognitio 52.6 59 0.0013 29.7 6.8 105 96-206 150-269 (340)
445 TIGR03573 WbuX N-acetyl sugar 52.6 1.5E+02 0.0032 27.5 9.8 102 89-206 60-169 (343)
446 PRK09354 recA recombinase A; P 52.5 57 0.0012 30.1 7.0 35 318-353 259-293 (349)
447 KOG2865 NADH:ubiquinone oxidor 52.0 1.2E+02 0.0026 27.2 8.3 91 105-202 77-173 (391)
448 KOG1251 Serine racemase [Signa 51.9 1.6E+02 0.0035 25.7 9.6 85 89-181 73-158 (323)
449 COG0826 Collagenase and relate 51.7 47 0.001 30.7 6.3 50 151-202 15-67 (347)
450 cd02072 Glm_B12_BD B12 binding 51.2 1E+02 0.0022 23.8 7.1 59 128-198 21-79 (128)
451 cd01121 Sms Sms (bacterial rad 51.2 1.3E+02 0.0028 28.2 9.3 112 86-202 78-205 (372)
452 TIGR01501 MthylAspMutase methy 50.5 1.1E+02 0.0024 23.8 7.3 60 127-198 22-81 (134)
453 KOG1201 Hydroxysteroid 17-beta 50.0 1.5E+02 0.0033 26.6 8.9 139 87-236 36-182 (300)
454 PRK10785 maltodextrin glucosid 49.2 47 0.001 33.4 6.5 56 151-206 177-248 (598)
455 PRK03620 5-dehydro-4-deoxygluc 48.9 89 0.0019 28.3 7.7 60 133-195 9-71 (303)
456 PF02662 FlpD: Methyl-viologen 48.6 89 0.0019 24.0 6.5 48 148-197 38-90 (124)
457 PRK00771 signal recognition pa 48.2 2.6E+02 0.0057 26.9 13.3 27 355-381 388-415 (437)
458 cd01169 HMPP_kinase 4-amino-5- 47.9 46 0.00099 28.7 5.6 49 151-206 52-104 (242)
459 TIGR00289 conserved hypothetic 47.7 1.8E+02 0.0039 25.0 9.8 98 92-200 4-114 (222)
460 TIGR00623 sula cell division i 47.3 1.5E+02 0.0034 24.1 11.1 102 90-201 33-142 (168)
461 COG1066 Sms Predicted ATP-depe 47.3 1.4E+02 0.003 28.3 8.4 98 99-204 107-217 (456)
462 TIGR03249 KdgD 5-dehydro-4-deo 47.0 1E+02 0.0022 27.7 7.8 59 134-195 8-69 (296)
463 cd02070 corrinoid_protein_B12- 46.9 1.7E+02 0.0037 24.5 11.4 57 128-196 104-160 (201)
464 PRK13111 trpA tryptophan synth 46.7 2.1E+02 0.0044 25.3 16.3 164 22-202 32-205 (258)
465 TIGR02370 pyl_corrinoid methyl 45.6 1.6E+02 0.0034 24.7 8.2 59 127-197 105-163 (197)
466 PRK10416 signal recognition pa 45.6 2.4E+02 0.0052 25.8 13.9 104 99-206 128-244 (318)
467 PF01008 IF-2B: Initiation fac 45.4 1.8E+02 0.0038 25.9 9.1 108 87-206 105-220 (282)
468 COG0816 Predicted endonuclease 45.3 67 0.0015 25.3 5.4 54 150-204 40-96 (141)
469 TIGR00715 precor6x_red precorr 45.2 1.1E+02 0.0023 27.0 7.3 94 91-200 2-95 (256)
470 cd01137 PsaA Metal binding pro 44.8 1.2E+02 0.0027 27.1 7.9 73 113-200 177-252 (287)
471 PRK11823 DNA repair protein Ra 44.6 1.7E+02 0.0036 28.3 9.2 112 86-202 76-203 (446)
472 COG1587 HemD Uroporphyrinogen- 44.1 2.2E+02 0.0047 24.8 9.2 90 95-196 105-197 (248)
473 COG1648 CysG Siroheme synthase 43.9 2E+02 0.0044 24.4 9.5 91 87-201 10-101 (210)
474 KOG4132 Uroporphyrinogen III s 43.8 35 0.00076 29.0 3.8 50 122-173 15-64 (260)
475 PRK08265 short chain dehydroge 43.4 2.2E+02 0.0048 24.7 10.7 97 89-190 6-107 (261)
476 PLN03244 alpha-amylase; Provis 43.2 38 0.00082 34.8 4.6 35 172-206 429-463 (872)
477 cd06569 GH20_Sm-chitobiase-lik 43.0 57 0.0012 31.4 5.7 76 128-203 29-116 (445)
478 COG2870 RfaE ADP-heptose synth 43.0 52 0.0011 30.8 5.0 35 165-204 144-178 (467)
479 cd00408 DHDPS-like Dihydrodipi 42.4 95 0.0021 27.6 6.8 53 142-196 8-62 (281)
480 PRK05638 threonine synthase; V 42.3 2.3E+02 0.005 27.3 9.8 119 17-140 44-164 (442)
481 PRK12412 pyridoxal kinase; Rev 42.0 56 0.0012 28.9 5.3 48 151-206 56-108 (268)
482 PRK14974 cell division protein 41.8 2.9E+02 0.0062 25.5 12.7 103 96-206 151-264 (336)
483 PF03652 UPF0081: Uncharacteri 41.7 95 0.0021 24.2 5.8 57 149-206 37-97 (135)
484 smart00839 ELFV_dehydrog Gluta 41.6 98 0.0021 22.7 5.6 53 335-387 40-98 (102)
485 COG1606 ATP-utilizing enzymes 41.6 2E+02 0.0043 25.3 8.0 107 75-206 8-122 (269)
486 PF00728 Glyco_hydro_20: Glyco 41.5 36 0.00078 31.4 4.1 68 128-203 25-92 (351)
487 TIGR02403 trehalose_treC alpha 41.1 74 0.0016 31.6 6.3 25 182-206 73-97 (543)
488 PRK15452 putative protease; Pr 41.0 85 0.0018 30.2 6.5 30 356-385 283-312 (443)
489 PRK10933 trehalose-6-phosphate 41.0 79 0.0017 31.5 6.5 25 182-206 79-103 (551)
490 PRK03170 dihydrodipicolinate s 40.6 1.3E+02 0.0029 26.9 7.5 52 142-195 12-65 (292)
491 COG0351 ThiD Hydroxymethylpyri 40.4 1E+02 0.0022 27.2 6.3 48 150-204 55-106 (263)
492 TIGR00683 nanA N-acetylneurami 40.2 1.4E+02 0.0031 26.7 7.6 53 142-196 11-66 (290)
493 PF00128 Alpha-amylase: Alpha 40.0 32 0.0007 30.8 3.5 25 182-206 50-74 (316)
494 PRK09441 cytoplasmic alpha-amy 40.0 33 0.00072 33.4 3.7 25 182-206 79-103 (479)
495 PRK06427 bifunctional hydroxy- 39.7 69 0.0015 28.2 5.5 48 151-205 57-108 (266)
496 cd02069 methionine_synthase_B1 39.3 2.1E+02 0.0045 24.4 8.0 58 128-197 110-167 (213)
497 cd01563 Thr-synth_1 Threonine 39.0 2.8E+02 0.0061 25.2 9.5 51 89-140 70-122 (324)
498 TIGR02402 trehalose_TreZ malto 38.9 46 0.00099 33.0 4.5 26 181-206 157-182 (542)
499 TIGR02026 BchE magnesium-proto 38.8 2E+02 0.0043 28.2 8.9 67 130-206 32-101 (497)
500 TIGR00196 yjeF_cterm yjeF C-te 38.8 2.8E+02 0.006 24.5 10.0 98 90-204 25-126 (272)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-56 Score=410.37 Aligned_cols=347 Identities=31% Similarity=0.516 Sum_probs=311.5
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCc-EEEecChHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS-VMVTAGANQAFVNIV 106 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~-v~~~~g~t~a~~~~~ 106 (398)
.++++|+.|.|+++.|+.+.+++.+++.+... .|.+..|.+++|+++++++++++++ ++++ |++|+|+++|+..++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHH
Confidence 47999999999999999999999999887533 6779999999999999999999874 4655 999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC--CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
.+++++||+|++++|.|+.|...+...|.+++.+ +.+. ++|.+|++.|++.+++++ |+|++++||||||.+++++
T Consensus 107 ~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v-~l~~~~~~f~~d~~~l~~~i~~kt--k~i~ln~P~NPTGav~~~~ 183 (393)
T COG0436 107 LALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEAAITPKT--KAIILNSPNNPTGAVYSKE 183 (393)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEE-eCCcCccCCcCCHHHHHhhcCccc--eEEEEeCCCCCcCcCCCHH
Confidence 9999999999999999999999999999999999 7643 589999999999999865 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece--eccCCC-ccccc--c--CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~--~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
++++|+++|++||+++|.||+| +.|++. ..+.. . .++++.+.|+||.++++|||+||+++++ +++++.+..
T Consensus 184 ~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~--~~l~~~~~~ 261 (393)
T COG0436 184 ELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP--EELIAALRK 261 (393)
T ss_pred HHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh--HHHHHHHHH
Confidence 9999999999999999999999 888873 33222 1 2578999999999999999999999986 678888888
Q ss_pred hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCccEEEEeeCCCCCCChHHH
Q 015890 258 VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEV 334 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 334 (398)
+.....++++.+.|.++..+|+..+ .+.+.+++.++++++.+.+.|.+.+++.+.. |++++|+|++++.. .++.++
T Consensus 262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-~d~~~f 340 (393)
T COG0436 262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-LDSEEF 340 (393)
T ss_pred HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-CCHHHH
Confidence 8888889999999999999999753 4778888899999999999999988767877 78999999999875 589999
Q ss_pred HHHHHHhcCeEEecCCCCCCC---CeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 335 VRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.+|+++.||.+.||+.|+.+ ++||+|++. +.++++++++++.+.++..
T Consensus 341 ~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 341 AKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY 392 (393)
T ss_pred HHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999864 899999997 5699999999999988754
No 2
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.2e-51 Score=386.66 Aligned_cols=368 Identities=23% Similarity=0.407 Sum_probs=317.7
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
|++++|+.....+.++.+.+... +.+.++|+.|.|++++++.+.+++.+.+.+. ...|++..|.+++|+++++++++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~ 107 (413)
T PLN00175 30 LQVAKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKD 107 (413)
T ss_pred cchhHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHH
Confidence 35788888878888888777654 4789999999999988999999998887653 568999999999999999999987
Q ss_pred cCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 85 ~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
+++ +++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ +.+++++.+|++.|++.+..
T Consensus 108 ~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~l~~~~~~ 186 (413)
T PLN00175 108 TGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTV-TLRPPDFAVPEDELKAAFTS 186 (413)
T ss_pred hCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-ECCcccCCCCHHHHHHhcCc
Confidence 764 565 79999999999999999999999999999999999999999999999999 88765678899999999986
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--c--cCCcEEEEcccccccCCC
Q 015890 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--V--EGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~--~~~~~i~~~s~sK~~~~~ 235 (398)
++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++...+. . ..+++++++|+||.|+++
T Consensus 187 ~~--k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 187 KT--RAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred Cc--eEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 54 99999999999999999999999999999999999999999 6554422111 1 146799999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 315 (398)
|+|+||++++ +++++.+........++.+.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+ ..+..|.
T Consensus 265 G~RiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~ 340 (413)
T PLN00175 265 GWKIGWAIAP---PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSS 340 (413)
T ss_pred chheeeeEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCC
Confidence 9999999999 78999888877666788999999999999987667888999999999999999999886 4777888
Q ss_pred ccEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 316 GAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 316 ~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+++|+|++++. +..++.++++++++++||.+.||+.|+ ..++|||+++. +++++++++++|.+.++
T Consensus 341 g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 341 GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 89999999853 222567899988878899999999874 24699999996 88999999999998765
No 3
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.1e-50 Score=380.97 Aligned_cols=368 Identities=21% Similarity=0.322 Sum_probs=301.2
Q ss_pred hhHhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|.+++|+.......+..+.+ ....|.+.++|+.|.+++++++.+.+++.+.+.......|++..|..++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 80 (388)
T PRK07366 1 MQFAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQW 80 (388)
T ss_pred CchhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHH
Confidence 34566766544445544333 33468899999999999999999999999887654456798889999999999999
Q ss_pred HhhhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890 81 LNQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (398)
Q Consensus 81 l~~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~ 156 (398)
+.+.+| ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ ++.+|+++++
T Consensus 81 ~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~ 159 (388)
T PRK07366 81 YEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPM-PLRAENDFLPVFADIP 159 (388)
T ss_pred HHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ECCCccCCCCCHHHHH
Confidence 988765 5677 69999999999999999999999999999999999999999999999999 87644 5778999998
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-c-ccc----cCCcEEEEccc
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-H-CCV----EGDHVVNLFSF 228 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~-~~~----~~~~~i~~~s~ 228 (398)
+.+..+ ++++++++||||||.+++.+++++|+++|+++|+++|+||+| +.+++.. . ... ..+++++++|+
T Consensus 160 ~~~~~~--~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 237 (388)
T PRK07366 160 TEVLAQ--ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL 237 (388)
T ss_pred Hhhccc--ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeec
Confidence 877655 499999999999999999999999999999999999999999 6665432 1 111 12468999999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
||.||+||+|+||++++ +++++.+.........+.++..+.++...+...++++++.++.++++++.+.+.|++++.
T Consensus 238 SK~~g~~GlRiG~~v~~---~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~ 314 (388)
T PRK07366 238 SKSYNMGGFRIGFAIGN---AQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGW 314 (388)
T ss_pred ccccCCcchhheehcCC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999998 889998887776555555444444455555433578889999999999999999988864
Q ss_pred CccccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
.+..|.+++|+|++++... .+..+++.++++++||.+.||+.|+. ++++||+++. +.+++++++++|.++
T Consensus 315 -~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 315 -PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAF 387 (388)
T ss_pred -cccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 6666888999999998642 24677888887788999999998864 5799999996 789999999999875
No 4
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-50 Score=379.46 Aligned_cols=365 Identities=22% Similarity=0.377 Sum_probs=308.9
Q ss_pred hhHhHHhhccCchHHHHHHHHH----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|++++|......+.+.++.+.. ..+.++++|+.|.+++++++.+.+++.+.+.....+.|+ ..|..++|++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~ 81 (399)
T PRK07681 3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY 81 (399)
T ss_pred ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence 5677777665566666655543 246789999999999988999999998877654345564 57999999999999
Q ss_pred HhhhcC--CCC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890 81 LNQENK--LYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (398)
Q Consensus 81 l~~~~~--~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~ 156 (398)
+.+.++ +++ ++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ ++.+|++.++
T Consensus 82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~ 160 (399)
T PRK07681 82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYM-PLKKENDFLPDLELIP 160 (399)
T ss_pred HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence 988766 467 789999999999999999999999999999999999999999999999999 87754 5789999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-c----cCCcEEEEcccc
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-V----EGDHVVNLFSFS 229 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~----~~~~~i~~~s~s 229 (398)
+.+.++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++..... . ..+++++++|+|
T Consensus 161 ~~~~~~--~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 238 (399)
T PRK07681 161 EEIADK--AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLS 238 (399)
T ss_pred Hhcccc--ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecc
Confidence 988755 499999999999999999999999999999999999999999 6555432211 1 235789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|.||++|+|+||++++ +++++.+........++.+.+.|.++..+++.+..++++.++.++++++.+.+.|++.+.
T Consensus 239 K~~~~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~- 314 (399)
T PRK07681 239 KSYSLAGSRIGYMIGN---EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGW- 314 (399)
T ss_pred cccCCccceeEEEecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence 9999999999999998 889998887776567788999999999999876678888888899999999999988864
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
.+..+.+++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +.+++++++++|++
T Consensus 315 ~~~~p~~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 315 NVDKPAGSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred cccCCCeeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 776788899999999754 36778999898669999999998864 5799999995 78999999999987
No 5
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-50 Score=375.23 Aligned_cols=374 Identities=34% Similarity=0.670 Sum_probs=319.1
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
|++++|+.....+.+..+........+.++|+.|.+++++|+.+.+++.+.+.......|++..|..++|+.+++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~ 81 (389)
T PRK05957 2 TQFTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQD 81 (389)
T ss_pred chhhHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 67889987766777776666666667899999999999899999999998876544567988899999999999999888
Q ss_pred cCC--C-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 85 NKL--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 85 ~~~--~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
++. + +++|++++|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.+ .++.+|+|.+++.+++
T Consensus 82 ~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~ 159 (389)
T PRK05957 82 NGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILV-PTD-DNYQLQPEAIEQAITP 159 (389)
T ss_pred hCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEe-ecC-CCCCcCHHHHHHhcCc
Confidence 775 3 6789999999999999999999999999999999999988889999999998 775 3467899999999986
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c----cccCCcEEEEcccccccCC
Q 015890 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C----CVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~----~~~~~~~i~~~s~sK~~~~ 234 (398)
++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... . ....+++++++|+||.+|+
T Consensus 160 ~~--klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 237 (389)
T PRK05957 160 KT--RAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF 237 (389)
T ss_pred Cc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccC
Confidence 54 99999999999999999999999999999999999999999 66554221 1 1234578999999999999
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG 313 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~ 313 (398)
+|+|+||++++ +++++++.........+.+.+.|.++..+|+.+..++++..+.++++++.+.+.|++++. ..+..
T Consensus 238 ~GlRiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 314 (389)
T PRK05957 238 ASWRIGYMVIP---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP 314 (389)
T ss_pred ccceeEEEecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence 99999999998 789999988776556677889999999999865677888888899999999999988765 36667
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.+++|+|++++.. .++.++++++++++||.+.||+.|+. .+++||+++..+.+++++++++|.+.++++.+
T Consensus 315 ~~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 315 ANGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred CCeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 88889999999753 46788999988779999999998854 46899999877889999999999999988654
No 6
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-50 Score=373.64 Aligned_cols=365 Identities=22% Similarity=0.360 Sum_probs=311.0
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
+++++.......+++..+......++++|+.|.+++++++.+.+++.+..... ...|++..|..++|+++++++.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~ 84 (384)
T PRK06348 6 LAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYD 84 (384)
T ss_pred HHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 68888777777888887776666789999999999988888888776655443 57798899999999999999987664
Q ss_pred --CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCC
Q 015890 87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 87 --~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~ 163 (398)
+++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+ ++++.+|++.+++.++++
T Consensus 85 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~- 162 (384)
T PRK06348 85 LSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIIL-ETYEEDGFQINVKKLEALITSK- 162 (384)
T ss_pred CCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEe-cCCcCcCCcCCHHHHHHhhCcC-
Confidence 578999999999999999999999999999999999999999999999999988 754 457789999999998765
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc--CCcEEEEcccccccCCCcc
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE--GDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~--~~~~i~~~s~sK~~~~~G~ 237 (398)
+++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.... ... .+++++++|+||.+|+||+
T Consensus 163 -~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl 241 (384)
T PRK06348 163 -TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW 241 (384)
T ss_pred -ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc
Confidence 489999999999999999999999999999999999999999 555432111 122 5689999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+........++.+.+.|.++..++...+.+.++.++.++++++.+.+.|++.+...+..++++
T Consensus 242 RiG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg 318 (384)
T PRK06348 242 RIGYVIAP---DYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGS 318 (384)
T ss_pred cceeeecC---HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCee
Confidence 99999999 788888887776667788999999999999865567788888889999999999988765677788889
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
+|+|++++....+..+++..+++++||.+.||+.|+. +++||++++. +.+++++++++|++
T Consensus 319 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~ 381 (384)
T PRK06348 319 IYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEK 381 (384)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHh
Confidence 9999999743346788888887778999999998864 5799999985 88899999998865
No 7
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-50 Score=376.03 Aligned_cols=349 Identities=22% Similarity=0.340 Sum_probs=298.9
Q ss_pred CCCeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCC-CcEEEecChHHHHHH
Q 015890 29 AKNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYK-SSVMVTAGANQAFVN 104 (398)
Q Consensus 29 g~~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~g~t~a~~~ 104 (398)
..+.++|+.|.++ .++|+.+.+++.+.+.......|++..|..++|+++++++++.+| +++ ++|++|+|++++++.
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 3678999999876 467888999988887654456798889999999999999999877 456 899999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC----CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+ ++++.+|++.|++.++.++ ++|++++|+||||.+
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~~~~d~~~l~~~~~~~~--k~v~l~~P~NPTG~~ 194 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYLSADKRAGLDLDQLEEAFKAGV--RVFLFSNPNNPAGVV 194 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eccccCcccCCCcCHHHHHHhhhhcC--eEEEECCCCCCCCcC
Confidence 999999999999999999999999999999999988 664 2357789999999997654 899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
++.+++++|+++|+++|+++|+||+| +.+++.+.. ....+++++++|+||.|++||+|+||++++ +++++
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~---~~l~~ 271 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS---PAIID 271 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC---HHHHH
Confidence 99999999999999999999999999 666553221 123578999999999999999999999998 78999
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
.+.........+.+.+.|.++..+++....++.+..+.++++++.+.+.|++++++.+..|++++|+|++++....+..+
T Consensus 272 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~ 351 (405)
T PRK06207 272 RMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHD 351 (405)
T ss_pred HHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHH
Confidence 88887766667778889999999998644677788888888899999999887556777788899999999753335778
Q ss_pred HHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
++..+++++||.+.||..|+. ++++||+++. +.+++++++++|.++++++
T Consensus 352 ~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 352 FVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred HHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 888887678999999998853 6899999997 7899999999999998764
No 8
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-49 Score=373.78 Aligned_cols=374 Identities=25% Similarity=0.367 Sum_probs=317.3
Q ss_pred chhhHhHHhhccCchHHHH----HHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 015890 3 SYAKLAKRALETEMPIMVQ----IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV 78 (398)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~ 78 (398)
|.|++++|+...+.+.+.+ .++..+++.++++|+.|.++.++++.+.+++.+.+.+. ...|++..|.+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia 80 (402)
T PRK06107 2 STFVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAII 80 (402)
T ss_pred CchhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHH
Confidence 3467888987655554433 34445677899999999999988999999999888653 467988899999999999
Q ss_pred HHHhhhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890 79 KKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL 155 (398)
Q Consensus 79 ~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l 155 (398)
+++++.++. ++++|++|+|+++|++.++.+++++||+|+++.|+|..|...+...+..++.+ +.+ ++++.+|++.+
T Consensus 81 ~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l 159 (402)
T PRK06107 81 AKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIV-ACPEEQGFKLTPEAL 159 (402)
T ss_pred HHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEe-cCCcccCCCCCHHHH
Confidence 999887765 67899999999999999999999999999999999999998888888888888 665 45678899999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEeece--eccCCCcccc---c---cCCcEEEEc
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTY--FMYDGRKHCC---V---EGDHVVNLF 226 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-~~~livDe~~--~~~~~~~~~~---~---~~~~~i~~~ 226 (398)
++.++++ ++++++++|+||||.+++.+++++++++|+++ |+++|+||+| +.|.+..... . ..+++++++
T Consensus 160 ~~~~~~~--~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~ 237 (402)
T PRK06107 160 EAAITPR--TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTN 237 (402)
T ss_pred HhhcCcC--ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEe
Confidence 9998765 48999999999999999999999999999998 9999999999 6565432211 1 135799999
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
|+||.|++||+|+||++++ +++++.+.........+++.+.|.++..+|+....++++..+.+.++++.+.+.|+++
T Consensus 238 S~SK~~~~pGlRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (402)
T PRK06107 238 GVSKTYAMTGWRIGYAAGP---ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI 314 (402)
T ss_pred ccchhhcCcccceeeeecC---HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999 8899999888876678899999999999997656788888899999999999999887
Q ss_pred CCCccccCCccEEEEeeCCC--------C--CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPE--------K--HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 376 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 376 (398)
++..+..|++++|+|++++. . ..+..+++.++++++||.++||..|+.++++|++++. +.+++++++++
T Consensus 315 ~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~ 393 (402)
T PRK06107 315 PGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACAR 393 (402)
T ss_pred CCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHH
Confidence 66678888899999998742 1 1245678888888899999999999888999999996 78999999999
Q ss_pred HHHHHHHH
Q 015890 377 LRRGLEEL 384 (398)
Q Consensus 377 l~~~~~~~ 384 (398)
|.+.++++
T Consensus 394 l~~~l~~~ 401 (402)
T PRK06107 394 IERAVAAL 401 (402)
T ss_pred HHHHHHhc
Confidence 99988764
No 9
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2e-49 Score=372.07 Aligned_cols=366 Identities=26% Similarity=0.394 Sum_probs=304.2
Q ss_pred hhHhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|++++|+.......+....+. ...+.+.++|+.|.+++++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 81 (385)
T PRK09276 2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADW 81 (385)
T ss_pred cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 456777765555545443333 3467889999999999988999999999887654456798888999999999999
Q ss_pred HhhhcCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHH
Q 015890 81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLE 156 (398)
Q Consensus 81 l~~~~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~ 156 (398)
+++.+|. +++ +|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.+ +.+ ++++.+|++.++
T Consensus 82 ~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~d~~~l~ 160 (385)
T PRK09276 82 YKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM-PLKEENGFLPDLDAIP 160 (385)
T ss_pred HHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence 9887664 565 59999999999999999999999999999999999999999999999999 776 447888999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c--cCCcEEEEcccc
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V--EGDHVVNLFSFS 229 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~--~~~~~i~~~s~s 229 (398)
+.+.+++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++..... . ..+++++++|+|
T Consensus 161 ~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 238 (385)
T PRK09276 161 EDVAKKA--KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLS 238 (385)
T ss_pred Hhccccc--eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecch
Confidence 9887654 99999999999999999999999999999999999999999 6554422211 1 135679999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|.||++|+|+||++++ +++++.+.........+.+.+.|.++..++.....++++.++.++++++.+.+.|++.+ +
T Consensus 239 K~~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 314 (385)
T PRK09276 239 KTYNMTGWRIGFAVGN---ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-L 314 (385)
T ss_pred hhcCCcchhheeeeCC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 9999999999999998 78888888776655566777889998999976567888888899999999999999875 4
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
.+..+.+++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +++++.+++++|.+
T Consensus 315 ~~~~~~~~~~~~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 315 EVEPPKATFYVWAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred cccCCCcceEEEEECCCC-CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 777788789999999764 36778888888778999999988764 5799999985 77888888888753
No 10
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=3.2e-49 Score=370.50 Aligned_cols=364 Identities=26% Similarity=0.376 Sum_probs=302.6
Q ss_pred HhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|......+.+..+.+. .+.|++.++|+.|.+++++++.+.+++.+.+.......|++..|.+++|++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 81 (383)
T TIGR03540 2 LADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYK 81 (383)
T ss_pred cchhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 3455554444444443333 346789999999999998899999999987765446789888899999999999998
Q ss_pred hhcCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890 83 QENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT 158 (398)
Q Consensus 83 ~~~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~ 158 (398)
+.++. +++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+. +++.+|++++++.
T Consensus 82 ~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v-~~~~~~g~~~d~~~l~~~ 160 (383)
T TIGR03540 82 RRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEM-PLKEENGFLPDFDAIPED 160 (383)
T ss_pred HhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEE-ecCcccCCccCHHHHHhh
Confidence 87665 455 69999999999999999999999999999999999999999999999999 7764 4678899999998
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEcccccc
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFSFSKA 231 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s~sK~ 231 (398)
+.++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.+.... .. ..+++++++|+||.
T Consensus 161 ~~~~--~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 238 (383)
T TIGR03540 161 IAKK--AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKT 238 (383)
T ss_pred cccc--ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccc
Confidence 8765 499999999999999999999999999999999999999999 555442211 11 13567999999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
||++|+|+||++.+ +++++.+.........+.+.+.|.++..+++...+++++.++.+.++++.+.+.|++.+ +.+
T Consensus 239 ~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~ 314 (383)
T TIGR03540 239 YNMTGWRIGMAVGN---ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDV 314 (383)
T ss_pred cCCccceeeEEeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEe
Confidence 99999999999998 78888888776555567788899999999987668888888999999999999999886 477
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+.+++|+|++++.. .+..+++.++++++||.++||..|+. ++++||+++. +++++.+++++|.+
T Consensus 315 ~~~~~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 315 EKPKATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred cCCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 7788889999999754 36788898888789999999998863 5799999985 77888888887754
No 11
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-50 Score=355.25 Aligned_cols=363 Identities=33% Similarity=0.539 Sum_probs=312.5
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEE-cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVS-LAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~ 85 (398)
.++++.+...+.|-++.++..+ ....+ |+.|.+++++|+-+.+++.+.+.....++|....|.++++++|++.++.++
T Consensus 8 ~~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~ 86 (420)
T KOG0257|consen 8 RNRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFY 86 (420)
T ss_pred ccccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHh
Confidence 4667777667788888888776 44444 999999999999999999999998778999999999999999999999977
Q ss_pred CC---CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-------CCCCCCChHHH
Q 015890 86 KL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-------SKTLHPDADWL 155 (398)
Q Consensus 86 ~~---~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~d~e~l 155 (398)
+. +.++|++|.|+.+++..++..++++||+|++.+|.|+.|....+..|..++.+ +.. ...|.+|.+++
T Consensus 87 ~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v-~~~~~~g~~~s~~~~~D~~~l 165 (420)
T KOG0257|consen 87 GGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFV-PLKPKEGNVSSSDWTLDPEEL 165 (420)
T ss_pred ccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceee-ccccccccccCccccCChHHH
Confidence 53 35679999999999999999999999999999999999999999999999988 654 45688999999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-----cccCCcEEEEccc
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSF 228 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-----~~~~~~~i~~~s~ 228 (398)
+.++.+++ |+|++++||||||.+++.++|++|+++|++||+++|.||+| +.+++..+. +..+++++.++|+
T Consensus 166 e~~~t~kT--k~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~ 243 (420)
T KOG0257|consen 166 ESKITEKT--KAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSF 243 (420)
T ss_pred HhhccCCc--cEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccc
Confidence 99999987 99999999999999999999999999999999999999999 778775322 2235789999999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--------hHHHHHHHHHHHHHHHHH
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIR 300 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~l~ 300 (398)
+|+||+.|||+||++++ +.++..+........+..+++.|.|.+.++.... .+..++.+.+.++++.+.
T Consensus 244 gKtf~~TGWrlGW~igp---~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~ 320 (420)
T KOG0257|consen 244 GKTFGVTGWRLGWAIGP---KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILA 320 (420)
T ss_pred cceeeeeeeeeeeeech---HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 8999999999888889999999999988887533 344558899999999999
Q ss_pred HHhccCCCCccccCCccEEEEeeCCC--------CC---CChHHHHHHHHHhcCeEEecCCCCCCCC-------eEEEEe
Q 015890 301 EALSPLGEGAVKGGEGAIYLWARLPE--------KH---LDDFEVVRWLAHRHGVVVIPGGACGCRG-------HLRISF 362 (398)
Q Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~-------~iRi~~ 362 (398)
+.|++++. +++.|++++|+|++++. .. .++..++.+++++.|+.+.|++.|+..+ .+|+++
T Consensus 321 k~L~~lg~-~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~ 399 (420)
T KOG0257|consen 321 KALEELGL-KVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF 399 (420)
T ss_pred HHHHhcCC-ccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHH
Confidence 99999966 99999999999999971 11 1455678899999999999999998654 456666
Q ss_pred cCCCHHHHHHHHHHHH
Q 015890 363 GGLVEDDCKAAADRLR 378 (398)
Q Consensus 363 ~~~~~~~~~~~~~~l~ 378 (398)
+. +++.++.+.++|+
T Consensus 400 ~k-~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 400 CK-ADETLRKAIERLK 414 (420)
T ss_pred Hh-hHHHHHHHHHHHh
Confidence 64 5666666666665
No 12
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-49 Score=369.25 Aligned_cols=368 Identities=25% Similarity=0.372 Sum_probs=308.2
Q ss_pred HhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|+.....+.+.++.+. ...++++++|+.|.+++++|+.+.+++.+.+.+. ...|++..|.+++|+.+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~ 83 (387)
T PRK08960 5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYA 83 (387)
T ss_pred hhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHH
Confidence 5667666666666654443 3457899999999999988999999999888653 3568888999999999999998
Q ss_pred hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhh
Q 015890 83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTL 159 (398)
Q Consensus 83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l 159 (398)
+.++ +++++|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.+ +.+.+ ++.+|++.+++.+
T Consensus 84 ~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~ 162 (387)
T PRK08960 84 QRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLV-PVGPDSRYQLTPALVERHW 162 (387)
T ss_pred HHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEE-ecCcccCCCCCHHHHHHHh
Confidence 7765 578999999999999999999999999999999999999999999999999988 77654 5778999999998
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCc
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G 236 (398)
++++ +++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.... ....+++++++|+||.+|++|
T Consensus 163 ~~~~--~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 163 NADT--VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred Cccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcc
Confidence 8765 88899999999999999999999999999999999999999 555432222 222468899999999999999
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 315 (398)
+|+||++++ +++++.+.........+.+.+.|.++..++.. ...++.+.++.++++++.+.+.|++++...+..|.
T Consensus 241 lRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 241 WRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred cEEEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 999999999 78888888777666677889999998888864 24678888889999999999999887652234577
Q ss_pred ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+++|+|+++++...+..+++.++++++||.+.||+.|+. ++++|++++. +.+.+.+++++|.++++
T Consensus 318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 899999999763346778888888789999999998864 4699999996 77889999988887664
No 13
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.1e-49 Score=367.10 Aligned_cols=369 Identities=25% Similarity=0.401 Sum_probs=314.1
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
++.|..+...+.+++...+..+.++.++|+.|.+.+++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g 83 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYD 83 (387)
T ss_pred hhHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 35677777778888888887777889999999988888889999999987653 46798889999999999999987765
Q ss_pred C--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 87 L--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 87 ~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
+ +++ +|++|+|+++|+..++.+++++||+|+++.|+|..+...++..|++++.+ +.+++++.+|.+.+++.+++++
T Consensus 84 ~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~ 162 (387)
T PRK07683 84 LHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFI-DTRSTGFRLTAEALENAITEKT 162 (387)
T ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEe-ecCcccCCCCHHHHHHhcCcCc
Confidence 4 677 89999999999999999999999999999999999999999999999999 8887788889999999987654
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcc
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~ 237 (398)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.+...... ..+++++++|+||.+|+||+
T Consensus 163 --~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl 240 (387)
T PRK07683 163 --RCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW 240 (387)
T ss_pred --eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc
Confidence 99999999999999999999999999999999999999999 55544322211 24579999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+.........+++.+.|.++..+|..+..+.++.++.++++++.+.+.|++.+ ..+..+.++
T Consensus 241 RiG~i~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 316 (387)
T PRK07683 241 RIGFLFAP---SYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGA 316 (387)
T ss_pred eeEEEEcC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCee
Confidence 99999999 78888887665444456678899999999987667778888889999999999998875 467778888
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+|+|+.++....+..+++.++++++||.+.||+.|+. ++++||+++. +++++.+++++|.+.+++-
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 317 FYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 9999988753345677887777889999999998854 5799999997 7899999999999988654
No 14
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=6.2e-49 Score=368.90 Aligned_cols=364 Identities=21% Similarity=0.339 Sum_probs=301.1
Q ss_pred HhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++++.....+.+..+.+ ....+++.++|+.|.++.++++.+.+++.+.+.......|++..|..++|+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~ 84 (389)
T PRK08068 5 PSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYK 84 (389)
T ss_pred hhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 455554444334443322 3445678999999998888788899999888765546689888999999999999998
Q ss_pred hhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890 83 QENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT 158 (398)
Q Consensus 83 ~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~ 158 (398)
+.+| ++++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++++++.
T Consensus 85 ~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~ 163 (389)
T PRK08068 85 REYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETM-PLIAENNFLPDYTKIPEE 163 (389)
T ss_pred HHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEe-ecccccCCCCCHHHHHHh
Confidence 7766 5677 79999999999999999999999999999999999999999999999999 8864 4788899999999
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-cccc----cCCcEEEEcccccc
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCV----EGDHVVNLFSFSKA 231 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~----~~~~~i~~~s~sK~ 231 (398)
++++ +++|++++||||||.+++.+++++|+++|+++++++|+||+| +.+++.. .+.. ..+++++++|+||.
T Consensus 164 ~~~~--~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~ 241 (389)
T PRK08068 164 VAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKT 241 (389)
T ss_pred cccc--ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhc
Confidence 8765 499999999999999999999999999999999999999999 6665421 1111 23578999999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
||++|+|+||++++ +++++.+.........+.+.+.|.++..++.....++++.++.+.++++.+.+.|++.+. .+
T Consensus 242 ~g~~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~ 317 (389)
T PRK08068 242 FNMAGWRVAFAVGN---ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW-EV 317 (389)
T ss_pred cCCccceeEeEecC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-cc
Confidence 99999999999998 889998887776555566667788888888655577888899999999999999988864 67
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+.+++|+|++++.. .+..++..++++++||.++||..|+. ++++||+++. +++.+.+++++|.+
T Consensus 318 ~~~~g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~ 385 (389)
T PRK08068 318 DAPKGSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGK 385 (389)
T ss_pred cCCCeeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHH
Confidence 7788889999999754 36788989887668999999998764 5799999986 67788888888765
No 15
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=5.4e-49 Score=370.18 Aligned_cols=359 Identities=22% Similarity=0.321 Sum_probs=300.6
Q ss_pred HHhhccCchHHHHHHHHHH-----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 9 KRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~-----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
+|+.....+.++.++++.+ .|.+.++|+.|.+++++++.+.+++.+.+.. ...|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~ 80 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER 80 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence 3444555566666666653 4689999999999999899999999887653 67898889999999999999988
Q ss_pred hcC---CCCC-cEEEecChHHHHHHHHHHhccC---CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHH
Q 015890 84 ENK---LYKS-SVMVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWL 155 (398)
Q Consensus 84 ~~~---~~~~-~v~~~~g~t~a~~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l 155 (398)
.+| ++++ +|++|+|+++++..++++++++ ||.|+++.|+|+.+...++..|++++.+ |.++ +++.+|++.+
T Consensus 81 ~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-p~~~~~~~~~d~~~l 159 (396)
T PRK09147 81 RYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFL-NCDPANNFAPDFDAV 159 (396)
T ss_pred HhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEe-ccCccccCccCHHHH
Confidence 876 5564 8999999999999999999999 8999999999999999999999999999 8764 4678999999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--cccc---------ccCCcE
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--KHCC---------VEGDHV 222 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~~~~---------~~~~~~ 222 (398)
++.+.++ ++++++++|+||||.+++.+++++|+++|++|++++|+||+| +.+++. .... ...+++
T Consensus 160 ~~~~~~~--~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (396)
T PRK09147 160 PAEVWAR--TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRL 237 (396)
T ss_pred HHHHhhc--cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccE
Confidence 9888654 499999999999999999999999999999999999999999 555442 1110 124689
Q ss_pred EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
++++|+||.++++|+|+||++++ +++++.+........++.+.+.|.++..++.. .+++.+.++.++++++.+.+.
T Consensus 238 i~~~S~SK~~~~~GlRiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 313 (396)
T PRK09147 238 VVFHSLSKRSNVPGLRSGFVAGD---AALLKKFLLYRTYHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPI 313 (396)
T ss_pred EEEeccccccCCccceeeeecCC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 78888887766555667888888887777764 567888889999999999999
Q ss_pred hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecCCCHHHHHHHH
Q 015890 303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA 374 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~ 374 (398)
|++. ..+..|.+++|+|++++ .+..+++.++++++||.+.||..|+. .+++||+++. +++++++++
T Consensus 314 L~~~--~~~~~p~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l 387 (396)
T PRK09147 314 LAPV--LDVQLPDAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAA 387 (396)
T ss_pred HHHh--cCCCCCCeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHH
Confidence 8874 35667888999999997 24678888888788999999987741 4789999997 688999999
Q ss_pred HHHHHHHH
Q 015890 375 DRLRRGLE 382 (398)
Q Consensus 375 ~~l~~~~~ 382 (398)
++|.++++
T Consensus 388 ~rl~~~~~ 395 (396)
T PRK09147 388 ERIVDFCR 395 (396)
T ss_pred HHHHHHhc
Confidence 99988763
No 16
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=2.1e-48 Score=365.14 Aligned_cols=371 Identities=25% Similarity=0.418 Sum_probs=312.0
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
+++|+.......++++.++..+.+++++|+.|.+++.+++.+.+++.+.+... ...|++..|.+++|+++++++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~ 85 (391)
T PRK07309 7 FNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYN 85 (391)
T ss_pred HHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 46777777777888888877666889999999999988999999988877543 35688888999999999999988776
Q ss_pred C--C-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-
Q 015890 87 L--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK- 162 (398)
Q Consensus 87 ~--~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~- 162 (398)
+ + +++|++|+|++++++.++.+++++||+|++++|+|.++...++..|.+++.+ +.+++++.+|++.+++.++..
T Consensus 86 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~ 164 (391)
T PRK07309 86 LDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEI-DTTENDFVLTPEMLEKAILEQG 164 (391)
T ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEE-ecCCcCCcCCHHHHHHHhhccC
Confidence 5 3 4689999999999999999999999999999999999999999999999999 877667788999999998742
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--ccCCcEEEEcccccccCCCcc
Q 015890 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VEGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~~~~~i~~~s~sK~~~~~G~ 237 (398)
..++++++++|+||||.+++.+++++|+++|++||+++|+|++| +.+++... .. ...+++++++|+||.||++|+
T Consensus 165 ~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 244 (391)
T PRK07309 165 DKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW 244 (391)
T ss_pred CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc
Confidence 23689999999999999999999999999999999999999999 66544221 11 234789999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+.........+++.+.|.++..+++.+..+....++.++++++.+.+.|++.+ ..+..|.++
T Consensus 245 RvG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg 320 (391)
T PRK07309 245 RIGLIFAP---AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGA 320 (391)
T ss_pred eeEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCee
Confidence 99999999 78888888765544567788999999999986544455667778888899999998876 477778888
Q ss_pred EEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+|+|++++... .+..+++.++++++||.+.||..|+. +++||++++. +.+++++++++|++++++.
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 99999987543 24677888887789999999998764 6799999996 7889999999999988664
No 17
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=8.3e-49 Score=369.25 Aligned_cols=354 Identities=19% Similarity=0.279 Sum_probs=295.1
Q ss_pred HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~ 100 (398)
+.+++.++|+.|+++ +++|+.+.+++.+.+.......|++..|..++|+++++++.+.++ +++++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 357899999999998 899999999999988765456798999999999999999988764 57899999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ ++++.+|++.++++++.++ +++++++||||||.
T Consensus 109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~nP~NPTG~ 185 (409)
T PLN00143 109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHF-DLLPEKGWEVDLDAVEAIADENT--IAMVIINPGNPCGS 185 (409)
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEE-eccCCCCCcCCHHHHHHhcccCC--EEEEEECCCCCCCC
Confidence 9999999999999999999999999999999999999998 764 4678899999999887655 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-- 251 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-- 251 (398)
+++.+++++|+++|+++++++|+||+| +.+++.... ....+++++++|+||.|++||+|+||+++++. +.+
T Consensus 186 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p-~~~~~ 264 (409)
T PLN00143 186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDP-SGLLQ 264 (409)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCc-hhhhh
Confidence 999999999999999999999999999 666553221 12235789999999999999999999998421 223
Q ss_pred ----HHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCC
Q 015890 252 ----ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLP 325 (398)
Q Consensus 252 ----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~ 325 (398)
++.+...... ....+.+.|.++..+|+. ...++++..+.++++++.+.+.|++++...+ ..|++++|+|++++
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~ 343 (409)
T PLN00143 265 ICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN 343 (409)
T ss_pred hHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence 3333333322 223478899999999975 3468888899999999999999988765333 35778999999997
Q ss_pred CC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 326 EK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 326 ~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.. ..++.+++.+++.++||.+.||..|+.++++||+++. +.+++++++++|.++++...+
T Consensus 344 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 344 LLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHHhcc
Confidence 42 1246778777878999999999999888999999995 789999999999999876654
No 18
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=366.53 Aligned_cols=364 Identities=26% Similarity=0.416 Sum_probs=309.1
Q ss_pred HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--C
Q 015890 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--L 87 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~ 87 (398)
|+.....+.++++.+...+..+.++|+.|.+++++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.++ +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la~~~~~~~~~~~ 82 (382)
T PRK06108 4 AARALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVAT 82 (382)
T ss_pred hhhhCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 44445556677776666555789999999999999999999999887664 35698889999999999999998877 6
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC--CCCCCChHHHHHhhccCCCC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~e~l~~~l~~~~~~ 165 (398)
++++|++++|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+. .++.+|++.+++.++++ +
T Consensus 83 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~--~ 159 (382)
T PRK06108 83 PPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCV-PLDFGGGGWTLDLDRLLAAITPR--T 159 (382)
T ss_pred CcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEe-eCCCCCCCccCCHHHHHHhcCcc--c
Confidence 78999999999999999999999999999999999999999999999999998 7763 35678999999998765 4
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccc----c-ccCCcEEEEcccccccCCCcc
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHC----C-VEGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~----~-~~~~~~i~~~s~sK~~~~~G~ 237 (398)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+. +.... . ...+++++++|+||.||++|+
T Consensus 160 ~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 239 (382)
T PRK06108 160 RALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW 239 (382)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc
Confidence 89999999999999999999999999999999999999999 5543 21111 1 123678999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+.........+.+.+.|.++..+|+...+++++..++++++++.+.+.|++++++.+..|.++
T Consensus 240 RiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g 316 (382)
T PRK06108 240 RLGWLVAP---PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGA 316 (382)
T ss_pred ceeeeeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCee
Confidence 99999998 788888877665455677899999999999876677888889999999999999988766677788889
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+|+|++++.. .+..+++++|++++||.+.||..|+. ++++|++++. +++++++++++|.++++
T Consensus 317 ~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 317 MYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 9999999754 35678889888789999999998753 5799999998 89999999999988764
No 19
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.1e-48 Score=366.29 Aligned_cols=372 Identities=24% Similarity=0.353 Sum_probs=305.1
Q ss_pred hHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
++|..+...+.+.++.++.. .|+++++|+.|.++.++++.+++++.+.+.......|++..|..++|+++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 83 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR 83 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence 45555555556666555543 57889999999999888999999988877554467898888999999999999987
Q ss_pred hcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 84 ~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
.+| ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+.++. .++.+++.++
T Consensus 84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~--~~~~l~~~~~ 160 (405)
T PRK09148 84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSV-PAEPDEE--FFPALERAVR 160 (405)
T ss_pred HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEE-eCCCCCC--CccCHHHHHh
Confidence 765 4576 89999999999999999999999999999999999999999999999999 7764432 2344555543
Q ss_pred c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-c--c--cCCcEEEEccccccc
Q 015890 161 T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-C--V--EGDHVVNLFSFSKAY 232 (398)
Q Consensus 161 ~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~--~--~~~~~i~~~s~sK~~ 232 (398)
. ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.... . . ..+.+++++|+||.+
T Consensus 161 ~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~ 240 (405)
T PRK09148 161 HSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF 240 (405)
T ss_pred hccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence 1 123589999999999999999999999999999999999999999 555442211 1 1 134678899999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+||+|+||++++ +++++.+........++.+.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+. .+.
T Consensus 241 ~~pGlR~G~~v~~---~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~ 316 (405)
T PRK09148 241 SMAGWRMGFAVGN---ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGW-DIP 316 (405)
T ss_pred CCcchheeeeeCC---HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccC
Confidence 9999999999998 889999988776667788899999999999765577888889999999999999988765 666
Q ss_pred cCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 313 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.|.+++|+|++++... .+..+++.++++++||.+.||..|+. ++++||+++ .+.+++.+++++|.+++....++
T Consensus 317 ~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 317 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSADET 394 (405)
T ss_pred CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999997532 23567888887789999999998854 579999998 48899999999999999887664
No 20
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.2e-48 Score=366.59 Aligned_cols=355 Identities=21% Similarity=0.284 Sum_probs=299.3
Q ss_pred HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~ 100 (398)
.+|.++++|+.|+|. +++|+.+.+++.+.+.......|++..|..++|+++++++.+.++ +++++|++|+|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467899999999997 788999999999988765567898999999999999999988764 56889999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
++..++.+++++||+|++++|+|+.+...++..|++++.+ +.+ ++++.+|++.+++.+++++ +++++++|+||||.
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~NPtG~ 184 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYV-DLLPEKGWEVDLDAVEALADQNT--VALVIINPGNPCGN 184 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEE-eCCCcCCCCCCHHHHHHHhccCc--eEEEEECCCCCCCC
Confidence 9999999999999999999999999988888899999999 774 4577899999999988765 88999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCC-----c
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----V 248 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~-----~ 248 (398)
+++.+++++|+++|+++|+++|+||+| +.+++..... ...+++++++|+||.|++||+|+||+++++. .
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~ 264 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD 264 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCccccccc
Confidence 999999999999999999999999999 6665532211 1245799999999999999999999998521 1
Q ss_pred HHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCC
Q 015890 249 EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE 326 (398)
Q Consensus 249 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~ 326 (398)
+++++.+...... ..+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+.++... +..|.+++|+|++++.
T Consensus 265 ~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~ 343 (409)
T PLN02656 265 PKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNL 343 (409)
T ss_pred HHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecch
Confidence 4677777765442 245688999999999975 346788889999999999999998876533 3568889999999863
Q ss_pred C----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 327 K----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 327 ~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
. ..++.+++.++++++||.+.||+.|+.++++||+++. +++++++++++|++++....+
T Consensus 344 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 344 SLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred hhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence 2 1235566767778999999999999888999999996 889999999999998876553
No 21
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-48 Score=364.82 Aligned_cols=370 Identities=24% Similarity=0.395 Sum_probs=302.1
Q ss_pred hHHhhccCchHHHHHHHHH----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
++++.....+.+..+.++. ..+.++++|+.|.++...|+.+++++.+.+.......|++..|..++|+++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~ 86 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 4555555555555544443 356789999999988877788888887766544467898889999999999999988
Q ss_pred hcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHH----H
Q 015890 84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADW----L 155 (398)
Q Consensus 84 ~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~----l 155 (398)
.++ ++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ +.+ ++++.+|++. +
T Consensus 87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 165 (403)
T PRK08636 87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKM-PLEYNEDFELDEDQFFENL 165 (403)
T ss_pred HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-eccccccCccChhhhhhHH
Confidence 776 4566 79999999999999999999999999999999999999999999999998 775 3456788775 4
Q ss_pred HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEcc
Q 015890 156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFS 227 (398)
Q Consensus 156 ~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s 227 (398)
++.++. ..+++++++++|+||||.+++.+++++|+++|++|++++|+||+| +.+++.... .. ..+.+++++|
T Consensus 166 ~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S 245 (403)
T PRK08636 166 EKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYT 245 (403)
T ss_pred HHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEe
Confidence 555543 233689999999999999999999999999999999999999999 666543211 11 1246778999
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
+||.||+||+|+||++.+ +++++.+.........+.+.+.|.++..+++....++++.++.+.++++.+.+.|++.+
T Consensus 246 ~SK~~~~~GlRiG~iv~~---~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 322 (403)
T PRK08636 246 LSKSYNMAGWRVGFVVGN---KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG 322 (403)
T ss_pred cccccCCccceeeeeeCC---HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999998 78888887776544566778888888777764457788888899999999999998876
Q ss_pred CCccccCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 308 EGAVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
. .+..+.+++|+|+++++.. .++.+++.++++++||.+.||..|+. ++++||+++ .+++++++++++|+++++.
T Consensus 323 ~-~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 323 W-ELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred C-cccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 4 7777888999999998542 24678888887789999999998864 579999999 5889999999999998866
No 22
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.2e-48 Score=365.25 Aligned_cols=369 Identities=27% Similarity=0.430 Sum_probs=305.6
Q ss_pred hhHhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|++++|+.....+.++.+.+. ...+.++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 79 (388)
T PRK07337 1 MRLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW 79 (388)
T ss_pred CchhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 567777765555555543333 3357889999999999988899999998877643 56798888999999999999
Q ss_pred HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (398)
Q Consensus 81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~ 157 (398)
+++.++ +++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++++++
T Consensus 80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~ 158 (388)
T PRK07337 80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLV-PSGPAERFQLTAADVEA 158 (388)
T ss_pred HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCcCCHHHHHh
Confidence 988765 478899999999999999999999999999999999999999999999999998 7764 457899999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-ccCCcEEEEcccccccCC
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-VEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~~~~~~i~~~s~sK~~~~ 234 (398)
.+++++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.+..... ...+++++++|+||.||+
T Consensus 159 ~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 236 (388)
T PRK07337 159 AWGERT--RGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM 236 (388)
T ss_pred hcCccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC
Confidence 998765 89999999999999999999999999999999999999999 6554432221 124678899999999999
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
+|+|+||++++ +++++.+.........+.+.+.|.++..++... ..++.+.++.++++++.+.+.|++.+......
T Consensus 237 ~G~RiG~~~~~---~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 313 (388)
T PRK07337 237 TGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVM 313 (388)
T ss_pred chhheeeeecC---HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 99999999999 788888887776556678899999988888752 24567778888899999999998876522246
Q ss_pred CCccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 314 ~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
|.+++|+|++++.. ..++.+++.++++++||.+.||..|+. .+++|++++. +.+++++++++|.+++
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 77899999999742 235678888888889999999998864 5799999997 7889999999998754
No 23
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-48 Score=366.16 Aligned_cols=369 Identities=26% Similarity=0.437 Sum_probs=313.1
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
+++|+.......++++.+..+...+.++|+.|.+++++++.+.+++.+.+... ...|.+..|.+++|+++++++.+.+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g 88 (391)
T PRK08361 10 IAGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYG 88 (391)
T ss_pred hhHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 57777776677778877776666789999999999988899999998877653 45688889999999999999987764
Q ss_pred --CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCC
Q 015890 87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP 163 (398)
Q Consensus 87 --~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~ 163 (398)
+++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.+ +.+.+ ++.+|++.+++.++.++
T Consensus 89 ~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~ 167 (391)
T PRK08361 89 VDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRI-PLREENEFQPDPDELLELITKRT 167 (391)
T ss_pred CCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhccccc
Confidence 668899999999999999999999999999999999999999999999999999 87654 46799999999998764
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cccCCcEEEEcccccccCCCcce
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CVEGDHVVNLFSFSKAYGMMGWR 238 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~~~~~~i~~~s~sK~~~~~G~r 238 (398)
+++++++|+||||.+++.+++++|+++|+++++++|+||+| +.+++... . ....+++++++|+||.||++|+|
T Consensus 168 --~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR 245 (391)
T PRK08361 168 --RMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWR 245 (391)
T ss_pred --EEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhh
Confidence 89999999999999999999999999999999999999999 55543221 1 12246789999999999999999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
+||++++ +++++.+........++.+.+.|.++..+++... .++++.++.++++++.+.+.|++++++.+..+++
T Consensus 246 iG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g 322 (391)
T PRK08361 246 LGFVIAP---EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG 322 (391)
T ss_pred hhhhccC---HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence 9999998 7888888766654556778899999999998643 4678888889999999999999876667888888
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
++|+|++++....+..++..++++++||.+.||..|+. ++++||+++. +++++++++++|.+++++
T Consensus 323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 89999999753346788888887778999999998864 5799999996 778999999999988754
No 24
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.2e-48 Score=369.71 Aligned_cols=354 Identities=21% Similarity=0.314 Sum_probs=295.3
Q ss_pred CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~ 102 (398)
++++++|+.|+|. +.+++++.+++.+.+.......|++..|..++|+++++++++.++ +++++|++|+|+++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al 144 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGI 144 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHH
Confidence 5789999999887 556788999999888765556898899999999999999987654 6789999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
..++.+++++||+|+++.|+|+.+...++..|++++.+ +.. ++++.+|++.+++++++++ +++++++|+||||.++
T Consensus 145 ~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~l~~~~~~~~d~~~l~~~~~~~~--~~v~i~nP~NPTG~v~ 221 (462)
T PLN02187 145 EIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKF-DLLPEKEWEIDLEGIEAIADENT--VAMVVINPNNPCGNVY 221 (462)
T ss_pred HHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-eCccccCCccCHHHHHHhcCCCc--EEEEEeCCCCCCCCcc
Confidence 99999999999999999999999999999999999988 664 3468899999999988765 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc---cCCcEEEEcccccccCCCcceeEEEEccCCcHH---HH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---FA 252 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~---~~ 252 (398)
+.+++++|+++|+++|+++|+||+| +.|++.+. ... ...++++++|+||.|++||+|+||+++++. +. ++
T Consensus 222 s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p-~~~~~~~ 300 (462)
T PLN02187 222 SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDP-EGVFETT 300 (462)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCc-hhHHHHH
Confidence 9999999999999999999999999 66655332 111 123689999999999999999999998531 22 33
Q ss_pred HHHHHhhccCCC--CcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCC-
Q 015890 253 TQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK- 327 (398)
Q Consensus 253 ~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~- 327 (398)
+.+......... +++.+.|.++..+|+. ...++++.++.+.++++.+.+.|++++... +..|.+++|+|++++..
T Consensus 301 ~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~ 380 (462)
T PLN02187 301 KVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL 380 (462)
T ss_pred HHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh
Confidence 455555544333 4588999999999975 347889999999999999999999887543 34677889999987531
Q ss_pred ---CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 328 ---HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 328 ---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
..++.+++.++++++||.+.||..|+.+++|||+++. .++.+++++++|.++++...+.
T Consensus 381 ~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 381 MDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred CCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhhc
Confidence 1245678888888999999999999888999999996 7899999999999999877654
No 25
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.9e-48 Score=363.34 Aligned_cols=362 Identities=24% Similarity=0.346 Sum_probs=301.9
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
...|+.....+.+..+.+.. +..++++|+.|.+++++++.+.+++.+.+... ...|++..|..++|+++++++++.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g 84 (384)
T PRK12414 7 PRSKLPDVGTTIFTVIGQLA-AQHDALNLSQGAPNFAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYG 84 (384)
T ss_pred HHHhcccCCccHHHHHHHHH-HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhC
Confidence 34555555556665555544 55789999999999988999999998877643 46798899999999999999998877
Q ss_pred CC--C-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 87 LY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 87 ~~--~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
++ + ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+ +.+++++.+|++.+++.++++
T Consensus 85 ~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~- 162 (384)
T PRK12414 85 ARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAI-KLSPEDFRVNWDEVAAAITPR- 162 (384)
T ss_pred CCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEE-ecCccccccCHHHHHhhcCcc-
Confidence 64 3 589999999999999999999999999999999999999999999999999 887667789999999999765
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc----ccCCcEEEEcccccccCCCc
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC----VEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~----~~~~~~i~~~s~sK~~~~~G 236 (398)
+++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... .. ...+++++++|+||.||+||
T Consensus 163 -~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 241 (384)
T PRK12414 163 -TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG 241 (384)
T ss_pred -cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence 499999999999999999999999999999999999999999 66654322 11 11357899999999999999
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
+|+||++++ +++++.+........++.+.+.|.++..+|+... +..+..+.++++++.+.+.|++.+. .+..+.+
T Consensus 242 lRiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~-~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~g 316 (384)
T PRK12414 242 WRVGYCLAP---AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA-SYLGLGAFYQRKRDLLARELAGSRF-ELLPSEG 316 (384)
T ss_pred ceEEEEecC---HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh-HHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCc
Confidence 999999999 7888888887766677889999999999998633 3445677888899999999998764 7777888
Q ss_pred cEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 317 ~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
++|+|+++++. ..++.+++.++++++||.+.||+.|+. .+++||+++. +++++++++++|.+
T Consensus 317 g~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 317 SFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred ceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 89999988642 124667777777889999999998742 4789999997 78899999988864
No 26
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-48 Score=363.88 Aligned_cols=364 Identities=21% Similarity=0.325 Sum_probs=296.8
Q ss_pred HhHHhhccCchHHHHHH----HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~----~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|+.......+..+. +..+.|.+.++|+.|.+..++|+.+++++.+.+.......|++..|.+++|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 87 (394)
T PRK05942 8 PADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYH 87 (394)
T ss_pred hhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHH
Confidence 45555444433333322 23346788999999988877777788887777654445789888999999999999998
Q ss_pred hhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890 83 QENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT 158 (398)
Q Consensus 83 ~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~ 158 (398)
+.++ ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...+...|.+++.+ +.+. +++.+|++.+++.
T Consensus 88 ~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~ 166 (394)
T PRK05942 88 RRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPI-ILKPENDWLIDLSSIPEE 166 (394)
T ss_pred HHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEe-ecCCccCCccCHHHHHHh
Confidence 8766 4576 48999999999999999999999999999999999998889999999999 8764 4678999999999
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc--CCcEEEEcccccc
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE--GDHVVNLFSFSKA 231 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~--~~~~i~~~s~sK~ 231 (398)
++++ ++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++..... .. .+.+++++|+||.
T Consensus 167 ~~~~--~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 244 (394)
T PRK05942 167 VAQQ--AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKT 244 (394)
T ss_pred cccc--ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhc
Confidence 8765 499999999999999999999999999999999999999999 6655432211 11 3457889999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
||++|+|+||++++ +++++.+........++.+.+.|.++..+++....+.++.++.++++++.+.+.|++.+. .+
T Consensus 245 ~~~~GlRiG~i~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~ 320 (394)
T PRK05942 245 YNMAGWRVGFVVGN---RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGW-NI 320 (394)
T ss_pred cCChhhheeeeecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-ee
Confidence 99999999999998 889999987776556778889999999999765577888888899999999999988764 67
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+.+++|+|++++... +..+++.++++++||.+.||..|+ ..+++|++++. +.+.+.+++++|.+
T Consensus 321 ~~~~~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~ 388 (394)
T PRK05942 321 PPTKATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQ 388 (394)
T ss_pred cCCCeeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 77887889999997543 567788778888999999999885 35799999985 56677777776654
No 27
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-48 Score=365.22 Aligned_cols=352 Identities=21% Similarity=0.298 Sum_probs=295.6
Q ss_pred CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~ 102 (398)
++++++|+.|+|. +++++++.+++.+.+.......|++..|..++|+++++++.+.++ +++++|++|+|+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 7799999999984 678899999999988765456798888999999999999987664 4688999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
+.++.++.++||+|+++.|+|+.|...+...|++++.+ +.. ++++.+|++.+++.+++++ +++++++|+||||.++
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~P~NPtG~v~ 207 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHF-DLLPERGWEVDLEGVEALADENT--VAMVIINPNNPCGSVY 207 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-eCCcccCCcCCHHHHHHHhCcCc--eEEEEeCCCCCCCCCC
Confidence 99999999999999999999999999999999999988 643 4568899999999998765 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH---
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA--- 252 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~--- 252 (398)
+.+++++|+++|+++|+++|+||+| +.|++.+... ...+++++++|+||.|++||+|+||++.++. +.++
T Consensus 208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~-~~~~~~~ 286 (430)
T PLN00145 208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDP-NGILKET 286 (430)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecc-hhhhhhh
Confidence 9999999999999999999999999 6665432211 1245799999999999999999999987421 2332
Q ss_pred ---HHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCC
Q 015890 253 ---TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK 327 (398)
Q Consensus 253 ---~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~ 327 (398)
+.+..... ...+.+.+.|.++..+|+. .++++++.++.++++++.+.+.|+.++++.+ ..|++++|+|++++..
T Consensus 287 ~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~ 365 (430)
T PLN00145 287 KVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS 365 (430)
T ss_pred HHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence 33433332 2345678999999999986 3477889999999999999999998866564 4688999999998642
Q ss_pred ----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 328 ----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 328 ----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
..++.+++.++++++||.+.||..|+.++++||+++. +.+++++++++|.+++.+..+
T Consensus 366 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 366 CLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred hcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence 1256788888988999999999999988999999995 889999999999999987664
No 28
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2.4e-48 Score=363.87 Aligned_cols=358 Identities=23% Similarity=0.385 Sum_probs=301.6
Q ss_pred HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEE
Q 015890 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMV 94 (398)
Q Consensus 18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~ 94 (398)
.++++.+...+.++.++|+.|.+++++++.+.+++.+.+... ...|++..|..++|+++++++.+.+++ +++ +|++
T Consensus 8 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~ 86 (378)
T PRK07682 8 GIRKFFDLAANMEGVISLGVGEPDFVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV 86 (378)
T ss_pred HHHHHHHHHHhcCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE
Confidence 344444444444689999999999988888889888876543 567988899999999999999887664 454 7999
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+ +.+. +++.+|++.+++++.++ ++++++++|
T Consensus 87 t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~--~~~v~~~~p 163 (378)
T PRK07682 87 TVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPV-ATTLENEFKVQPAQIEAAITAK--TKAILLCSP 163 (378)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHhhcCcc--cEEEEEECC
Confidence 9999999999999999999999999999999999999999999888 7653 35778999999999765 499999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cc--cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
+||||.+++.+++++|+++|+++++++|+||+| +.+++...+ .. ..+++++++|+||.|+++|+|+||++++
T Consensus 164 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-- 241 (378)
T PRK07682 164 NNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP-- 241 (378)
T ss_pred CCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--
Confidence 999999999999999999999999999999999 666542111 11 1367999999999999999999999998
Q ss_pred cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
+++++.+........++.+.+.|.++..+|+.+..++++.++.++++++.+.+.|++++. .+..|++++|+|+.++..
T Consensus 242 -~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~~~~~ 319 (378)
T PRK07682 242 -VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPSISST 319 (378)
T ss_pred -HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEeccCC
Confidence 789998877665555678899999999999876667888888999999999999998865 677788889999988543
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..+..++++++++++||.+.||..|+. ++++||+++. +.+++++++++|+++++++
T Consensus 320 ~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 320 GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 346788888887788999999998864 6899999997 7899999999999988653
No 29
>PRK07324 transaminase; Validated
Probab=100.00 E-value=5.7e-49 Score=366.17 Aligned_cols=346 Identities=22% Similarity=0.293 Sum_probs=299.0
Q ss_pred HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
...++++++|+.|.+.+..|+.+ +++.+++.+. ...|++..|.+++|+++++++. ++++++|++|+|+++++..+
T Consensus 22 ~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~~~ 96 (373)
T PRK07324 22 DIAESCIDSLTLEELLALAGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANFLV 96 (373)
T ss_pred ccccCCCCCCcHHHHHhccCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHHHH
Confidence 34688999999999988878887 8888777664 4589888999999999999884 46789999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
+.+++++||+|+++.|+|..+...++..|.+++.+ +.+. +++.+|++.+++.+++++ ++|++++|+||||.+++.+
T Consensus 97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--kli~i~~p~NPtG~~~~~~ 173 (373)
T PRK07324 97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYW-QLKEENGWLPDLDELRRLVRPNT--KLICINNANNPTGALMDRA 173 (373)
T ss_pred HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhCCCCC--cEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999 7764 467889999999887654 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
++++|+++|+++|+++|+||+| +.+++... .....+++++++|+||.+|++|+|+||++++ +++++.+.+....
T Consensus 174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~---~~li~~~~~~~~~ 250 (373)
T PRK07324 174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN---EEVIDILRKYRDY 250 (373)
T ss_pred HHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC---HHHHHHHHHHhCc
Confidence 9999999999999999999999 55543211 1222467899999999999999999999998 8999999888876
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
...+.+.+.+.++..+++..+.++++.++.++++++.+.+.|++.+.+.+..|.+++++|+.++.. .+..+++.+++++
T Consensus 251 ~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~-~~~~~~~~~ll~~ 329 (373)
T PRK07324 251 TMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD-MPSEDFCLKLLKE 329 (373)
T ss_pred EEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC-CCHHHHHHHHHHh
Confidence 677888899999888887645677888888899999999999887666777888888888888653 3678899998888
Q ss_pred cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+||.+.||+.|+.++++||+++. +++.+.+++++|.+++++.
T Consensus 330 ~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 330 TGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred cCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 99999999999888999999996 7899999999999988753
No 30
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=4.7e-48 Score=373.92 Aligned_cols=371 Identities=19% Similarity=0.332 Sum_probs=298.8
Q ss_pred hhHhHHhhccCchHH----HHHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015890 5 AKLAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l 77 (398)
|++++|+.....+.. ....++...|+++++|+.|.+ ++++|+.+++++.+.+.. ...|++..|..++|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReai 194 (517)
T PRK13355 117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAI 194 (517)
T ss_pred CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHH
Confidence 446777776554333 345555667899999999987 466799999999888764 45798899999999999
Q ss_pred HHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHH
Q 015890 78 VKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADW 154 (398)
Q Consensus 78 ~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~ 154 (398)
++++++.++ +++++|++|+|++++++.++.+++++||+|+++.|+|+.|...++..|.+++.+ +.+++ +|.+|+++
T Consensus 195 a~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~-~~~~~~~~~~d~~~ 273 (517)
T PRK13355 195 MQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHY-RCDEQSEWYPDIDD 273 (517)
T ss_pred HHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEe-ecCcccCCCCCHHH
Confidence 999987763 678999999999999999999999999999999999999999999999999998 77644 68899999
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cccCC-cEEEEccc
Q 015890 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGD-HVVNLFSF 228 (398)
Q Consensus 155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~-~~i~~~s~ 228 (398)
+++.+++++ ++|++++||||||.+++.+++++|+++|++||+++|+||+| +.|++.... ....+ .+++++|+
T Consensus 274 l~~~~~~~~--k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~ 351 (517)
T PRK13355 274 IRSKITSRT--KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGL 351 (517)
T ss_pred HHHhcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecc
Confidence 999998765 99999999999999999999999999999999999999999 666653221 11122 35667999
Q ss_pred ccccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC---chHHHHHHHHHHHHHHHHHH
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIRE 301 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~ 301 (398)
||.|+++|+|+||++.+.+ ++ +++.+.... ....+.+.++|.++..+|... .+++.+. +.+.++++.+.+
T Consensus 352 SK~~~~~G~RiG~~i~~~~-~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~ 428 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGN-KRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYN 428 (517)
T ss_pred hhhccCcccceEEEEeeCc-hhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999999985421 33 344443322 234678899999999999742 2344443 345566888999
Q ss_pred HhccCCCCccccCCccEEEEeeCCCC---CCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHH
Q 015890 302 ALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADR 376 (398)
Q Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~ 376 (398)
.|++++++.+..|++++|+|++++.. ..++.+++.++++++||.+.||+.|+ .+++|||+++ .+++++++++++
T Consensus 429 ~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~r 507 (517)
T PRK13355 429 ALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDR 507 (517)
T ss_pred HHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHH
Confidence 99988666888899999999988642 12466778788889999999999986 4789999997 588999999999
Q ss_pred HHHHHHHH
Q 015890 377 LRRGLEEL 384 (398)
Q Consensus 377 l~~~~~~~ 384 (398)
|.++++..
T Consensus 508 l~~~~~~~ 515 (517)
T PRK13355 508 LADFFSYY 515 (517)
T ss_pred HHHHHHHh
Confidence 99998754
No 31
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.8e-48 Score=361.56 Aligned_cols=345 Identities=21% Similarity=0.337 Sum_probs=292.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCC-cEEEecChHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKS-SVMVTAGANQAFVN 104 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~-~v~~~~g~t~a~~~ 104 (398)
+.+.++|+.|.+++.+++.+.+++.+.+.......|+ ..|..++|+++++++++.+| ++++ +|++|+|+++++..
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 5679999999999999999999988876544456685 58999999999999988765 5565 79999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+++ ++.+|++.+++.+..+ +++|++++||||||.+++.
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~--~k~i~l~nP~NPTG~v~s~ 198 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNL-PLLEENNFLPDLDSIPKDIKEK--AKLLYLNYPNNPTGAVATK 198 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-ecCCCcCCcCCHHHHHHhhccc--ceEEEEECCCCCCCcCCCH
Confidence 999999999999999999999999999999999999 88754 5778999999988765 4999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++++|+++|+++|++||+||+| +.+++...+. . ..+++++++|+||.+|++|+|+||++++ +++++.+..
T Consensus 199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~---~~l~~~l~~ 275 (410)
T PRK06290 199 EFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN---ELIVKAFAT 275 (410)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC---HHHHHHHHH
Confidence 99999999999999999999999 5554422221 1 2356799999999999999999999998 889998887
Q ss_pred hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC------CCh
Q 015890 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------LDD 331 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 331 (398)
.......+.+.+.|.++..+++. .++.++..+.+.++++.+.+.|++.+. .+..+++++|+|++++... .+.
T Consensus 276 ~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~f~l~v~lp~~~~~~~~~~~~ 353 (410)
T PRK06290 276 VKDNNDSGQFIAIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNEVGF-KAEMPGGTFYLYVKAPKGTKSGIKFENA 353 (410)
T ss_pred HHhccccCCcHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCeeeEEEEECCCccccCCCCCCH
Confidence 77666666777899999999986 467888888999999999999998864 7777888999999997542 357
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++++|+++.++.+.||..| .+++||+++. .++++.++++++|.+.+.++
T Consensus 354 ~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 354 EEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred HHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 789999987777888888755 3799999985 36778899999998888764
No 32
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.3e-48 Score=363.11 Aligned_cols=352 Identities=22% Similarity=0.364 Sum_probs=295.6
Q ss_pred cCchHHHHHHHHHH-----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--
Q 015890 14 TEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-- 86 (398)
Q Consensus 14 ~~~~~~~~~~~~~~-----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-- 86 (398)
.+.+.+.++.++.+ +|.+.++|+.|.|++++|+.+.+++.+.+.. ...|++..|.+++|+++++++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 84 (393)
T TIGR03538 7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLP 84 (393)
T ss_pred CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence 33455666666554 5789999999999999999999999987653 67898889999999999999988764
Q ss_pred --CCCC-cEEEecChHHHHHHHHHHhccCCCE--EEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc
Q 015890 87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDS--VVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE 160 (398)
Q Consensus 87 --~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~ 160 (398)
++++ +|++|+|+++++..++.+++++||+ |+++.|+|..+...++..|++++.+ +.+ ++++.+|++.+++.+.
T Consensus 85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~ 163 (393)
T TIGR03538 85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFL-NCTAENGFLPDFDAVPESVW 163 (393)
T ss_pred ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEe-eccccCCCCCCHHHHHHHHh
Confidence 4564 7999999999999999999999986 9999999999999999999999999 876 4468899999999887
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--Ccccc---------ccCCcEEEEcc
Q 015890 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--RKHCC---------VEGDHVVNLFS 227 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~~~~~---------~~~~~~i~~~s 227 (398)
++ ++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++ ..... ...+++++++|
T Consensus 164 ~~--~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 RR--CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred hc--ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 65 499999999999999999999999999999999999999999 55543 11110 12468999999
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
+||.|+++|+|+||++++ +++++.+.........+.+.+.|.++...+.. ++++++.++.++++++.+.+.|++.
T Consensus 242 ~SK~~~~~GlRvG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGD---AEILKAFLRYRTYHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred chhhcCCcccceEEEecC---HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 999999999999999999 78888887776655667788899888888864 5678888889999999999999875
Q ss_pred CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 308 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+..|.+++|+|++++ .+..+++.++++++||.+.||+.|+ ..+++||+++. +++++++++++|.+
T Consensus 317 -~~~~~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 317 -LDLELPDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRS 391 (393)
T ss_pred -CcccCCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence 24567888999999997 2467888888778999999999874 14689999997 78999999999876
Q ss_pred H
Q 015890 380 G 380 (398)
Q Consensus 380 ~ 380 (398)
+
T Consensus 392 ~ 392 (393)
T TIGR03538 392 F 392 (393)
T ss_pred h
Confidence 4
No 33
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-48 Score=361.04 Aligned_cols=365 Identities=24% Similarity=0.373 Sum_probs=307.4
Q ss_pred hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-
Q 015890 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK- 86 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~- 86 (398)
++|+...+.+.++.+.++..+ .+.++|+.|.++.+.|+.+.+++.+.+.+. ...|++..|..++|+++++++++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 82 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGL 82 (387)
T ss_pred hHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence 566666666777777776654 689999999998888888999888776543 46798889999999999999988766
Q ss_pred -CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890 87 -LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (398)
Q Consensus 87 -~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~ 164 (398)
++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+++++.+|++.+++.++.+
T Consensus 83 ~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~-- 159 (387)
T PRK08912 83 DLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLV-RLEPPHWRLPRAALAAAFSPR-- 159 (387)
T ss_pred CCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccCcCCHHHHHHHhCcc--
Confidence 4677 89999999999999999999999999999999999999999999999998 876656788999999998765
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEEcccccccCCCcc
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~~s~sK~~~~~G~ 237 (398)
++++++++|+||||.+++.+++++|+++|+++++++|+||+| +.+++... ... ..+++++++|+||.||++|+
T Consensus 160 ~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK08912 160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW 239 (387)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence 489999999999999999999999999999999999999999 66554221 111 13678999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+........++.++..+.++..++....+++++.++.++++++.+.+.|++.+. .+..+.++
T Consensus 240 RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~ 315 (387)
T PRK08912 240 KVGFVCAA---PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGF-PVLPSQGT 315 (387)
T ss_pred eeEEEecC---HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcc
Confidence 99999998 788888877766555677777888888888654577888889999999999999998864 77778888
Q ss_pred EEEEeeCCC-C-CCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPE-K-HLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 318 ~~~~~~~~~-~-~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+|+|+++++ . ..+..+++.++++++||.+.||..|+ ..+++|++++. +++.+++++++|.++++
T Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARR 385 (387)
T ss_pred eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 999999975 2 23577888888778899999999874 25799999997 68899999999988765
No 34
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=9.6e-48 Score=362.89 Aligned_cols=354 Identities=20% Similarity=0.300 Sum_probs=296.0
Q ss_pred HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--------CCCCcEEE
Q 015890 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--------LYKSSVMV 94 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--------~~~~~v~~ 94 (398)
.+++++++|+.|.|+ +.+++.+.+++.+.+.......|++..|..++|+++++++++.++ +++++|++
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i 109 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL 109 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence 378999999999986 467899999998877654467898888999999999999987543 67899999
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.++.+ +++|++++|
T Consensus 110 t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~--~~~i~~~~p 186 (412)
T PTZ00433 110 CSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFY-NCRPEKDWEADLDEIRRLVDDR--TKALIMTNP 186 (412)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEE-ecCccccCcCCHHHHHHHhccC--ceEEEEeCC
Confidence 9999999999999999999999999999999999999999999999 7754 45678999999988765 499999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-cCCcEEEEcccccccCCCcceeEEEEc--c
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-EGDHVVNLFSFSKAYGMMGWRVGYIAY--P 245 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~--~ 245 (398)
|||||.+++.+++++|+++|+++|+++|+||+| +.+++.... .. ...++++++|+||.||+||+|+||+++ +
T Consensus 187 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p 266 (412)
T PTZ00433 187 SNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDP 266 (412)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCC
Confidence 999999999999999999999999999999999 656543211 11 123578999999999999999999996 2
Q ss_pred CC-cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890 246 SE-VEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323 (398)
Q Consensus 246 ~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 323 (398)
.. .+++++.+..... ..++.+.+.|.++..++... +.++++.++.++++++.+.+.|++..+..+..|++++|+|++
T Consensus 267 ~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~ 345 (412)
T PTZ00433 267 HGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSR 345 (412)
T ss_pred cccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEE
Confidence 11 1457777766543 23578899999999988753 477888889999999999999988655577778889999999
Q ss_pred CCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 324 LPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 324 ~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
++.. ..+..++++.+++++||.+.||..|+.++++|++++. .++++++++++|.++++...
T Consensus 346 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 346 LDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred echhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhc
Confidence 8642 1246788888886789999999999888999999996 68899999999999887654
No 35
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-47 Score=360.14 Aligned_cols=371 Identities=28% Similarity=0.464 Sum_probs=314.1
Q ss_pred hhHhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|++++|+.+.+...+.++.++.+ ++.+.++|+.|.++.++++.+.+++.+.+.+. ...|++..|..++|+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 80 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAK 80 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHH
Confidence 56888888777666666554443 46889999999999988999999998887654 45698888999999999999
Q ss_pred HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (398)
Q Consensus 81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~ 157 (398)
+.+.++ +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+. .++.+|++.+++
T Consensus 81 ~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~ 159 (393)
T PRK05764 81 LKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEA 159 (393)
T ss_pred HHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEE-ecCcccCCcCCHHHHHH
Confidence 988765 567899999999999999999999999999999999999999999999999999 7763 467889999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---cc---cccCCcEEEEcccc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---HC---CVEGDHVVNLFSFS 229 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~~---~~~~~~~i~~~s~s 229 (398)
.+++++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.. .. ....+++++++|+|
T Consensus 160 ~l~~~~--~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 237 (393)
T PRK05764 160 AITPKT--KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS 237 (393)
T ss_pred hhCccc--eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence 997654 89999999999999999999999999999999999999999 5554422 11 12245789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|.+|++|+|+||++.+ +++++.+.........+++.+.|.++..+++...+++++..+.+.++++.+.+.|++++++
T Consensus 238 K~~~~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 314 (393)
T PRK05764 238 KAYAMTGWRLGYAAGP---KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGL 314 (393)
T ss_pred ccccCccceeEEEecC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999988 8899888877766667888999999999997435777888888899999999999988555
Q ss_pred ccccCCccEEEEeeCCCCCC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+..+.+++|+|+.++.... ++.++...+++++||.+.+|..|+.++++||+++. +++++++++++|.+++++
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 315 ECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERFLES 391 (393)
T ss_pred cccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 77778888999999875432 24788888887899999999988778999999996 799999999999998864
No 36
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.3e-47 Score=363.12 Aligned_cols=358 Identities=22% Similarity=0.292 Sum_probs=290.4
Q ss_pred HHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890 25 LVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99 (398)
Q Consensus 25 ~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t 99 (398)
....|.++++++.|+| ++++|+.+.+++.+.+.+.....|++..|..++|+++++++++.++ +++++|++|+|++
T Consensus 27 ~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~ 106 (433)
T PRK06855 27 LEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG 106 (433)
T ss_pred HHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence 3456788999999998 6788999999988877655567899999999999999999988765 5688999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHH-HhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
+++..++. ++++||.|+++.|+|+.+.... ...|++++.+ +.++ +++.+|+++|++.++....++++++++|+|||
T Consensus 107 ~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPT 184 (433)
T PRK06855 107 DAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTY-RLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPT 184 (433)
T ss_pred HHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEE-ecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCC
Confidence 99999985 7899999999999999876542 3458888888 7764 56889999999999743335899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---ccC-CcEEEEcccccccCCCcceeEEEEccCC--cH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE 249 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~--~~ 249 (398)
|.+++.+++++|+++|+++|+++|+||+| +.|++..... ... ..+++++|+||.+++||+|+||+++++. .+
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~ 264 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDE 264 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhh
Confidence 99999999999999999999999999999 6665532211 112 3579999999999999999999997421 02
Q ss_pred ---HHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890 250 ---GFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324 (398)
Q Consensus 250 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (398)
++++.+..... ...+++.+.|.++..+++.+ +.++++.++.++++++.+.+.|++.++..+..|++++|+|+++
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l 343 (433)
T PRK06855 265 VFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF 343 (433)
T ss_pred HHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence 23333333322 23467889999999999864 4678888999999999999999887555777888899999999
Q ss_pred CCCC--------------------------CChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHH
Q 015890 325 PEKH--------------------------LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 325 ~~~~--------------------------~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
++.. .++.+++.++++++||.+.||..|+. ..++|||++..+++++++++++|
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l 423 (433)
T PRK06855 344 EDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTL 423 (433)
T ss_pred ccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHH
Confidence 8632 13567787888899999999999864 35799999987899999999999
Q ss_pred HHHHHHHh
Q 015890 378 RRGLEELV 385 (398)
Q Consensus 378 ~~~~~~~~ 385 (398)
.+++++..
T Consensus 424 ~~~~~~~~ 431 (433)
T PRK06855 424 AEKIEEYL 431 (433)
T ss_pred HHHHHHHh
Confidence 99998643
No 37
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.6e-47 Score=358.83 Aligned_cols=363 Identities=23% Similarity=0.369 Sum_probs=306.7
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
+++|......+.++...+.. ++.+.++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|+.+++++.+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~ 85 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYG 85 (386)
T ss_pred hhhHhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 56677666666666665544 44789999999999888899999988877543 46798889999999999999998877
Q ss_pred CC--CC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 87 LY--KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 87 ~~--~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
.+ ++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+.+++.+|++++++.++.+
T Consensus 86 ~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~- 163 (386)
T PRK09082 86 RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRV-ALQPPDFRVDWQRFAAAISPR- 163 (386)
T ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccccCCHHHHHHhcCcc-
Confidence 64 43 79999999999999999999999999999999999999999999999999 887667889999999999765
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-ccc--c--cCCcEEEEcccccccCCCc
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCC--V--EGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~--~--~~~~~i~~~s~sK~~~~~G 236 (398)
++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.. ... . ..+++++++|+||.+|++|
T Consensus 164 -~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G 242 (386)
T PRK09082 164 -TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG 242 (386)
T ss_pred -ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence 499999999999999999999999999999999999999999 6654422 111 1 2468999999999999999
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
+|+||++++ +++++.+........++.+.+.|.++..+++..+.++++.++.++++++.+.+.|++.+. .+..+.+
T Consensus 243 ~RiG~iv~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~g 318 (386)
T PRK09082 243 WKVGYCVAP---AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRF-KLLPCEG 318 (386)
T ss_pred hhhhhhhCC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCe
Confidence 999999999 889998888776667788999999999888744677888888899999999999988654 7777888
Q ss_pred cEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 317 ~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
++|+|+++++ ...+..+++++|++++||.+.||+.|+. .+++|++++. +++++++++++|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 319 TYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999874 2246788989888899999999997742 4789999997 78889999988864
No 38
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=6.7e-47 Score=356.19 Aligned_cols=352 Identities=28% Similarity=0.432 Sum_probs=293.3
Q ss_pred HHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890 26 VRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ 100 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~ 100 (398)
..+|.++++|+.|.| ++++++.+.+++.+.+... ...|++..|..++|+++++++++.++ +++++|++|+|+++
T Consensus 26 ~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 104 (398)
T PRK08363 26 EKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE 104 (398)
T ss_pred HhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence 346789999999998 6788999999998877653 35688889999999999999988765 57899999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
++..++.+++++||+|+++.|+|..+...++..|.+++.+.+.+++++.+|++.+++.+++++ ++|++++|+||||.+
T Consensus 105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NPtG~~ 182 (398)
T PRK08363 105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT--KAIAVINPNNPTGAL 182 (398)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce--EEEEEECCCCCCCcC
Confidence 999999999999999999999999999999999998887734556677889999999997654 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEc--cCCcHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFAT 253 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~ 253 (398)
++.+++++|+++|+++|+++|+||+| +.+.+.... .....++++++|+||.|+++|+|+||+++ + +++++
T Consensus 183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~---~~~~~ 259 (398)
T PRK08363 183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP---EGKLA 259 (398)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc---HHHHH
Confidence 99999999999999999999999999 555442221 11234789999999999999999999997 4 56666
Q ss_pred HHHHhhc---cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC-CC
Q 015890 254 QLLKVQD---NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HL 329 (398)
Q Consensus 254 ~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~ 329 (398)
.+..... ...++.+.+.|.++..+|....+++++..+.++++++.+.+.|++++++.+..|.+++|+|+.++.. ..
T Consensus 260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~ 339 (398)
T PRK08363 260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWK 339 (398)
T ss_pred HHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCC
Confidence 6544322 1235788999999999997656788888999999999999999887666777788888999888752 12
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
++.+++.++++++||.+.||+.|+. ++++|++++. +++++++++++|++++++.
T Consensus 340 ~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 340 DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRER 395 (398)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 4567777777899999999998864 5799999985 7899999999999888763
No 39
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-47 Score=354.41 Aligned_cols=366 Identities=30% Similarity=0.494 Sum_probs=302.3
Q ss_pred hHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
++|.....+..+++++++.. .+.+.++|+.|.++..+++.+.+++.+.+.......|++..|.+++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 33444333445566555543 45689999999999888899999988876544456798889999999999999988
Q ss_pred hcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890 84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (398)
Q Consensus 84 ~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~ 160 (398)
.++ +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.++
T Consensus 83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYL-PCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred HhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ecCCCcCCCCCHHHHHHHhc
Confidence 776 568899999999999999999999999999999999999999999999999999 8864 577889999999998
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc----cCCcEEEEcccccccC
Q 015890 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV----EGDHVVNLFSFSKAYG 233 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~----~~~~~i~~~s~sK~~~ 233 (398)
.++ ++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.. ...... ..+++++++|+||.+|
T Consensus 162 ~~~--~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 162 PRT--RAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred ccC--cEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 754 89889999999999999999999999999999999999999 44332 111111 1357899999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
++|+|+||++++ +++++.+.........+++...|.++..+++..+++.++.++.++++++.+.+.|++.+.+.+ .
T Consensus 240 ~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~ 315 (386)
T PRK07550 240 LTGHRVGAVVAS---PARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWEL-L 315 (386)
T ss_pred CcccceEeeecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-C
Confidence 999999999998 788888887776666778899999999998764567778888889999999999988644343 3
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+.+++|+|+.++....+..+++.++++++||.+.||..|+. .+++||+++..+++++++++++|.++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 56789999999752346788999888789999999998853 57999999977788999999999765
No 40
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-46 Score=353.86 Aligned_cols=371 Identities=25% Similarity=0.426 Sum_probs=305.9
Q ss_pred hhHhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
||+++|....+...++++.+... .|.++++|+.|.++.++++.+.+++.+.... ...|++..|..++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~~ia~~ 78 (397)
T PRK07568 1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSHSQGIPELREAFAKY 78 (397)
T ss_pred CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCCCCCCHHHHHHHHHH
Confidence 67888887767667777655432 3567999999999998899999998876543 56798889999999999999
Q ss_pred Hhhhc-CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCC-CChHHHHH
Q 015890 81 LNQEN-KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLH-PDADWLEK 157 (398)
Q Consensus 81 l~~~~-~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~d~e~l~~ 157 (398)
+.+.. ++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+ ++++. .+++.+++
T Consensus 79 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~~~~~~l~~ 157 (397)
T PRK07568 79 YKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPV-TTKIEEGFHLPSKEEIEK 157 (397)
T ss_pred HHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCCHHHHHH
Confidence 97432 4578899999999999999999999999999999999999998889999999998 775 34554 36799999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc--cCCcEEEEccccc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV--EGDHVVNLFSFSK 230 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~--~~~~~i~~~s~sK 230 (398)
.+++++ ++|++++|+||||.+++.+++++|+++|+++|+++|+|++| +.+++... + .. ..++++++.|+||
T Consensus 158 ~~~~~~--~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK 235 (397)
T PRK07568 158 LITPKT--KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSK 235 (397)
T ss_pred hcCccc--eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchh
Confidence 987654 89999999999999999999999999999999999999999 65554321 1 11 1468899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
.||++|+|+||+++++ +++++.+..... ..++.+.+.|.++..+++..+.++++..+.++++++.+.+.|++++++.
T Consensus 236 ~~~~~G~R~G~~~~~~--~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (397)
T PRK07568 236 RYSACGARIGCLISKN--KELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVV 312 (397)
T ss_pred hccCCCcceEEEecCC--HHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 9999999999999864 677777655443 2467888999999999986567888888899999999999998876667
Q ss_pred cccCCccEEEEeeCCCCCCChHHHHHHHHHh-----cCeEEecCCCCC-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+..|.+++|+|++++.. +..++..+++++ +||.+.||..|+ .++++|++++. +.+++++++++|.++
T Consensus 313 ~~~p~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~ 389 (397)
T PRK07568 313 CEKPKGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEA 389 (397)
T ss_pred ecCCCcceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence 77788889999999753 567888888754 699999998773 24699999986 689999999999999
Q ss_pred HHHHhc
Q 015890 381 LEELVK 386 (398)
Q Consensus 381 ~~~~~~ 386 (398)
+++..+
T Consensus 390 l~~~~~ 395 (397)
T PRK07568 390 LEKYNK 395 (397)
T ss_pred HHHhhc
Confidence 987653
No 41
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=7.1e-47 Score=362.89 Aligned_cols=354 Identities=24% Similarity=0.377 Sum_probs=286.7
Q ss_pred cCCCeEEcCCccCC----------------CCC-------------cHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHH
Q 015890 28 GAKNAVSLAQGVVY----------------WQP-------------PKMAMEKVKELVWDP--SISKYGADEGLPELRDA 76 (398)
Q Consensus 28 ~g~~~~~l~~g~~~----------------~~~-------------~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~ 76 (398)
.|.++|+|+.|.|. +.. |..+++++.+.+... ....|++..|..++|++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 45899999999995 544 447788877655432 35679999999999999
Q ss_pred HHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCCh
Q 015890 77 LVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDA 152 (398)
Q Consensus 77 l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~ 152 (398)
+++++.+.+| +++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..|.+++.+ +.++ ++|.+|+
T Consensus 124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v-~~~~~~~~~~d~ 202 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPY-YLDEEKGWSLDQ 202 (481)
T ss_pred HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEE-EeccccCCCCCH
Confidence 9999988765 468899999999999999999998 799999999999999999999999999999 8764 5788999
Q ss_pred HHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Ccccc-------cc
Q 015890 153 DWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCC-------VE 218 (398)
Q Consensus 153 e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~-------~~ 218 (398)
+.|++.+++ ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.|++ .+... ..
T Consensus 203 ~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~ 282 (481)
T PTZ00377 203 EELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELP 282 (481)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhc
Confidence 999999864 113599999999999999999999999999999999999999999 66642 22111 11
Q ss_pred C-----CcEEEEcccccc-cCCCcceeEEEEc---cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---Cc----
Q 015890 219 G-----DHVVNLFSFSKA-YGMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GP---- 282 (398)
Q Consensus 219 ~-----~~~i~~~s~sK~-~~~~G~r~G~i~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~---- 282 (398)
. .++++++|+||. ++++|+|+||+++ + +++++.+..... ...+.+.+.|.++..+++. .+
T Consensus 283 ~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p---~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 358 (481)
T PTZ00377 283 AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP---PEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYP 358 (481)
T ss_pred ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC---HHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHH
Confidence 1 258999999997 5889999999986 6 788888887664 3457889999999999963 11
Q ss_pred hHH---HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC--CCC---------CChHHHHHHHHHhcCeEEec
Q 015890 283 EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--EKH---------LDDFEVVRWLAHRHGVVVIP 348 (398)
Q Consensus 283 ~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~ll~~~gi~v~~ 348 (398)
.+. ++..+.++++++.+.+.|++++++.+..|++++|+|++++ ... .++.+++..+++++||.+.|
T Consensus 359 ~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p 438 (481)
T PTZ00377 359 LYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVP 438 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeC
Confidence 132 3333456788899999999886678888998999997764 111 12445667788899999999
Q ss_pred CCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 349 GGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 349 g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
|+.|+. ++++|+|++ .+++++++++++|.++++++.++
T Consensus 439 G~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 439 GSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred CcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 999863 469999999 58889999999999999887654
No 42
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=9.3e-47 Score=355.58 Aligned_cols=350 Identities=18% Similarity=0.246 Sum_probs=290.2
Q ss_pred CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHHHH
Q 015890 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a~~ 103 (398)
++++++|+.|.++ +++++.+.+++.+.+.......|++..|..++|+++++++.+.. .+++++|++|+|+++++.
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~ 109 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIE 109 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHH
Confidence 5789999999984 67899999999888766445679889999999999999997643 256889999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~ 182 (398)
.++.+++++||+|+++.|+|..+...++..|++++.+ +.+.+ ++.+|++.+++.++.++ +++++++|+||||.+++
T Consensus 110 ~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~ 186 (401)
T TIGR01264 110 MCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLY-NLLPDKSWEIDLKQLESLIDEKT--AALIVNNPSNPCGSVFS 186 (401)
T ss_pred HHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHHHhccCc--eEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999988 76543 57889999999887654 89999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc-CCcEEEEcccccccCCCcceeEEEEccCC---cHHHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSE---VEGFAT 253 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~---~~~~~~ 253 (398)
.+++++|+++|+++|+++|+||+| +.+++..... .. ..++++++|+||.|+++|+|+||+++++. ..++++
T Consensus 187 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~ 266 (401)
T TIGR01264 187 RQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRD 266 (401)
T ss_pred HHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHH
Confidence 999999999999999999999999 6665432111 11 23589999999999999999999998741 113444
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC----C
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK----H 328 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~ 328 (398)
.+..... ..++.+.+.|.++..+|.. .++++++.++.++++++.+.+.|+.++++.+..|.+++|+|++++.. .
T Consensus 267 ~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~ 345 (401)
T TIGR01264 267 GLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEF 345 (401)
T ss_pred HHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCC
Confidence 4444432 2456788999999999975 34788888999999999999999988555666788899999997531 1
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+..+++.++++++||.+.||+.|+.++++||+++. +++++++++++|.+++++
T Consensus 346 ~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 346 KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHhc
Confidence 246788888877899999999988878999999996 688999999999988764
No 43
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-46 Score=350.35 Aligned_cols=331 Identities=20% Similarity=0.249 Sum_probs=276.4
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~ 106 (398)
|+++++|+.|.|++++++.+.+++.+.... ...|++..|..++|+++++++++.++ +++++|++|+|+++++..++
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~ 100 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFP 100 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 779999999999998899999988876533 67798888999999999999988876 67899999999999999998
Q ss_pred HHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 107 LTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 107 ~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
.+++ ++||.|+++.|+|+.+...++..|++++.+ +.+ ++++.+|++..+ + ++ +++|++++||||||.+++.
T Consensus 101 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~~~--~-~~--~k~v~i~nP~NPTG~~~s~ 174 (374)
T PRK05839 101 QFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLM-PLTKENDFTPSLNEKE--L-QE--VDLVILNSPNNPTGRTLSL 174 (374)
T ss_pred HHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEe-ecccccCCcCCcchhh--h-cc--ccEEEEeCCCCCcCcccCH
Confidence 8874 578999999999999999999999999999 876 346777755432 2 22 5999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+++++|+++|+++|+++|+||+| +.++...... ...+++++++|+||.|++||+|+||++++ ++++
T Consensus 175 ~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---~~~~ 251 (374)
T PRK05839 175 EELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---ASIL 251 (374)
T ss_pred HHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC---HHHH
Confidence 99999999999999999999999 4332221111 12368999999999999999999999998 7888
Q ss_pred HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+.+.........+.+.+.|.++..++.. ++++++.++.+.++++.+.+.|. . . .|++++|+|++++ +..
T Consensus 252 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~---~-~--~p~gg~fi~~~~~----~~~ 320 (374)
T PRK05839 252 KKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILG---I-T--IPPATFYVWLPVD----NDE 320 (374)
T ss_pred HHHHHHHhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcC---C-C--CCCeeEEEEEeCC----ChH
Confidence 8887776555667888889888877764 67788888888888888887763 2 2 5678999999996 356
Q ss_pred HHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+++.++++++||.+.||..|+. ++++|||++. +.+++.+++++|.++++
T Consensus 321 ~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 321 EFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 8888887679999999987753 5899999986 78999999999988764
No 44
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-46 Score=323.82 Aligned_cols=352 Identities=22% Similarity=0.293 Sum_probs=309.3
Q ss_pred CCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEecChHHHHH
Q 015890 30 KNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 30 ~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~g~t~a~~ 103 (398)
+.++.++.|+|. +++.+++.+|+..++..+...+|.|+.|....|+++++|+.+.. .+++++|++|+|.++|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 579999999864 45889999999999998888999999999999999999987765 367899999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
.++.+|.++|.+||+|.|+|+-|...++-.|+++.++.-.++.+|.+|++.+|.+++++| .++++.||+||+|.+++.
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT--~AivviNP~NPcGnVys~ 218 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT--VAIVVINPNNPCGNVYSE 218 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCe--eEEEEeCCCCCCcccccH
Confidence 999999999999999999999999999999999999956678899999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccccCCCcceeEEEEccCC-----cHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGFA 252 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~-----~~~~~ 252 (398)
+.|++|++.|+++|+.+|.||+| +.|++.++.+.. --.++.++|.||.|=.||||+||++..+. ....+
T Consensus 219 ~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 219 DHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence 99999999999999999999999 777776554332 23478899999999889999999988762 13344
Q ss_pred HHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCC----
Q 015890 253 TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE---- 326 (398)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~---- 326 (398)
+.+....+ ...+++...|.|+-..|+. .++++.+....+..+.+...+.|+++|+.. ...|++.+|+|+.+.-
T Consensus 299 q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~ 377 (447)
T KOG0259|consen 299 QGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFP 377 (447)
T ss_pred HHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhc
Confidence 55555554 3567789999999999987 347789999999999999999999999988 6789999999998853
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
...++.+|+.+|.++..+.+.||..|+.++|+|++++. ..+.+++++++|+.+...-.
T Consensus 378 ~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 378 DIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhh
Confidence 24678999999999999999999999999999999996 78899999999999987655
No 45
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.6e-46 Score=347.65 Aligned_cols=335 Identities=24% Similarity=0.362 Sum_probs=285.6
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC-cEEEecChHHHHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~g~t~a~~~~~~~ 108 (398)
+++|+.|.+++++++.+.+++.+.... ...|++..|..++|+++++++.+.+| ++++ +|++|+|++++++.++.+
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~ 79 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLV 79 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHH
Confidence 679999999998899999999887643 66798888999999999999988876 4576 899999999999999999
Q ss_pred hccCC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 109 LCDAG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 109 l~~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
++++| |+|+++.|+|+.+...++..|++++.+ +.+ ++++.+|++.+++++++++ +++++++|+||||.+++.+
T Consensus 80 ~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~p~NPtG~~~~~~ 156 (350)
T TIGR03537 80 FIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAV-KLKKEDGFLLRLEKVEKSILEET--KIVWINYPHNPTGATAPRS 156 (350)
T ss_pred HcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEc-ccCcccCCccCHHHHHHhhhhcc--EEEEEeCCCCCcCcccCHH
Confidence 99877 699999999999999999999999999 886 5678899999999988754 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~ 260 (398)
++++|+++|+++|+++|+||+| +.++..... ....+++++++|+||.+|++|+|+||++.+ +++++.+.....
T Consensus 157 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~ 233 (350)
T TIGR03537 157 YLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD---EKLISFLRKLRA 233 (350)
T ss_pred HHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC---HHHHHHHHHHHH
Confidence 9999999999999999999999 444432221 123568999999999999999999999988 788888887766
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 340 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (398)
....+.+...+.++..++.. +.+.++.++.++++++.+.+.|++.+. .+..+.+++|+|++++.. .+..++++.|+
T Consensus 234 ~~~~~~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~~~~-~~~~~l~~~L~- 309 (350)
T TIGR03537 234 NFGVASPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKVPSG-IDAKDYALRLL- 309 (350)
T ss_pred hhccCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEECCCC-CCHHHHHHHHH-
Confidence 55666666778887777764 567788888899999999999988765 777788889999999864 35778888886
Q ss_pred hcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 341 RHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 341 ~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
++||.+.||..|+. ++++|++++ .+++++++++++|++
T Consensus 310 ~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 310 ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 68999999998854 589999998 578899999988875
No 46
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4.5e-46 Score=349.47 Aligned_cols=362 Identities=25% Similarity=0.380 Sum_probs=301.1
Q ss_pred HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-
Q 015890 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY- 88 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~- 88 (398)
|+.....+.++++.+...+ .+.++|+.|.++...|+.+.+++.+.+... ...|++..|..++|+++++++.+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~ 82 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEY 82 (387)
T ss_pred hhhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4444555667777666654 589999999988877888888888777653 4679888999999999999998877654
Q ss_pred -CC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCC
Q 015890 89 -KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPT 164 (398)
Q Consensus 89 -~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~ 164 (398)
++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+++ ++.+|++++++.++++
T Consensus 83 ~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~-- 159 (387)
T PRK07777 83 DPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPV-PLVPDGRGFALDLDALRAAVTPR-- 159 (387)
T ss_pred CCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEe-ecCCccCCCcCCHHHHHHhcCcc--
Confidence 54 79999999999999999999999999999999999999999999999888 77654 4678999999998765
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc----cCCcEEEEcccccccCCCcc
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV----EGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~----~~~~~i~~~s~sK~~~~~G~ 237 (398)
+++|++++|+||||.+++.+++++|+++|+++++++|+||+| +.+.+... ... ..+++++++|+||.||++|+
T Consensus 160 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK07777 160 TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW 239 (387)
T ss_pred cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc
Confidence 499999999999999999999999999999999999999999 55544321 111 14578999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+........++.+.+.|.++..++.....++++..+.+.++++.+.+.|++.+. ++..++++
T Consensus 240 RiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~ 315 (387)
T PRK07777 240 KIGWACGP---APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGF-EVHDSAGT 315 (387)
T ss_pred eeEEEecC---HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCC-CccCCCcc
Confidence 99999999 788888877666556677888888888888765678888889999999999999988754 77778888
Q ss_pred EEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 318 ~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
+|+|++++. ...++.+++++|++++||.+.||..|+. ++++|++++. +++++++++++|.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 316 YFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred eEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 999998753 2236788999998788999999997753 4589999997 7899999999998654
No 47
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-46 Score=325.78 Aligned_cols=349 Identities=24% Similarity=0.367 Sum_probs=307.9
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~ 105 (398)
++.+++.|.+.+++++.||++++|+.+.++++ .++|+ .+..++.+++.+|.+++++ +.++.|++++|..-++..+
T Consensus 23 g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~ 99 (388)
T COG1168 23 GNEDVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLA 99 (388)
T ss_pred CCCCcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHH
Confidence 55899999999999999999999999999885 57785 6668899999999999986 4578899999999999999
Q ss_pred HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
++.++++||.|++..|.|+++....+..|.+++.. |.. ...+.+|+++||+.+.+.. ++++++||||||||.+++.
T Consensus 100 I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~-pL~~~~~~y~iD~~~LE~~~~~~~-vkl~iLCnPHNP~Grvwt~ 177 (388)
T COG1168 100 IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIEN-PLVEDDGRYEIDFDALEKAFVDER-VKLFILCNPHNPTGRVWTK 177 (388)
T ss_pred HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEec-cccccCCcEEecHHHHHHHHhcCC-ccEEEEeCCCCCCCccccH
Confidence 99999999999999999999999999999999988 654 3347789999999998765 7999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCccccc------cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
|+|++|.++|.+||+++|.||.| +.+.|.++... ..++.+.+.|.||+|+++|+.+++++.++ +++.+++
T Consensus 178 eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n--~~lr~~~ 255 (388)
T COG1168 178 EELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN--RELRAKF 255 (388)
T ss_pred HHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC--HHHHHHH
Confidence 99999999999999999999999 76666433221 13778999999999999999999998887 6664443
Q ss_pred -HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 256 -LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
..+......++|.++..|..++.+.+.+|+.+..+.++.+++.+.+.+.+ +|.+++..|++++..|+++.+...++.+
T Consensus 256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~ 335 (388)
T COG1168 256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE 335 (388)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence 34444556778999999999999999999999999999999999999987 6788999999999999999987778889
Q ss_pred HHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.++++++.+|.+.+|..|+ +.+++|++++. +...+++++++|+.+++..
T Consensus 336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR 387 (388)
T ss_pred HHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999997 45799999996 8899999999999888753
No 48
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.4e-46 Score=357.93 Aligned_cols=349 Identities=21% Similarity=0.320 Sum_probs=284.2
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhc-----C------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEE
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-----D------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV 94 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~-----~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~ 94 (398)
.++|+|+.+.|++.. +.+.+.+..... . .....|++..|.+++|+++++++.+.++ +++++|++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 469999999998864 555555554321 0 1244587788999999999999987654 57899999
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCC-CCCCCCChHHHHHhhcc----CCCCeEE
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKLV 168 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~----~~~~~~v 168 (398)
|+|+++++..++.+++++||.|+++.|+|+.+...++ ..|++++.+ +.+ ++++.+|++.+++.++. ..++++|
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v 195 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI-HCSSSNGFQITESALEEAYQQAQKLNLKVKGV 195 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE-ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 9999999999999999999999999999999988777 589999999 765 56788899999988864 2236999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc------------ccCCcEEEEcccccccC
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC------------VEGDHVVNLFSFSKAYG 233 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~------------~~~~~~i~~~s~sK~~~ 233 (398)
++++|+||||.+++.+++++|+++|+++|+++|+||+| +.|++.+. +. ...+++++++|+||.|+
T Consensus 196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 99999999999999999999999999999999999999 55654321 10 12468999999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
++|+|+||+++++ +.+++.+..... ..+.+.+.|.++..+|++.. .++++.++.++++++.+.+.|++++. .
T Consensus 276 l~GlRiG~li~~~--~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi-~ 350 (468)
T PLN02450 276 LPGFRVGAIYSND--EMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGI-K 350 (468)
T ss_pred CCCccEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-c
Confidence 9999999999984 445665554432 23468899999999998742 36778888999999999999998864 7
Q ss_pred cccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+..+.+++|+|+++++... +..+++.++++++||.+.||+.|+. ++++||+++..+++++++++++|++++..
T Consensus 351 ~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 351 CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 7788889999999974321 2345777888789999999998863 68999999976789999999999999876
Q ss_pred Hh
Q 015890 384 LV 385 (398)
Q Consensus 384 ~~ 385 (398)
..
T Consensus 431 ~~ 432 (468)
T PLN02450 431 DS 432 (468)
T ss_pred cc
Confidence 55
No 49
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.6e-45 Score=346.98 Aligned_cols=356 Identities=22% Similarity=0.309 Sum_probs=293.1
Q ss_pred HHHHHHcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEe
Q 015890 22 IQELVRGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVT 95 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~ 95 (398)
+.+....|.++++|+.|.|. +++++.+.+++.+.+.......|++..|..++|+++++++....+ +++++|++|
T Consensus 23 ~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t 102 (403)
T TIGR01265 23 LKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLT 102 (403)
T ss_pred HHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEe
Confidence 33334457899999999874 678899999999888765456798889999999999999987554 467899999
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~ 174 (398)
+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.+. +++.+|++.+++.+++++ +++++++|+
T Consensus 103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~i~~p~ 179 (403)
T TIGR01265 103 SGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY-DLLPEKDWEIDLDGLEALADEKT--VAIVVINPS 179 (403)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-cCCcccCCccCHHHHHHHhCcCc--cEEEEecCC
Confidence 999999999999999999999999999999999999999999988 6643 456789999999987665 899999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--c-ccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--C-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~-~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
||||.+++.+++++|+++|+++|+++|+|++| +.+++... . . ....++++++|+||.|++||+|+||+++++.
T Consensus 180 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~- 258 (403)
T TIGR01265 180 NPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDP- 258 (403)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCc-
Confidence 99999999999999999999999999999999 65554321 1 1 1234689999999999999999999988531
Q ss_pred HH-----HHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890 249 EG-----FATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322 (398)
Q Consensus 249 ~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 322 (398)
++ +++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+.++++.+..|.+++|+|+
T Consensus 259 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~ 337 (403)
T TIGR01265 259 HGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMV 337 (403)
T ss_pred hhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEE
Confidence 12 3444443332 2356788999999999975 347788889999999999999998875556667888999999
Q ss_pred eCCCCC----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 323 ~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+++... .+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.+++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 338 KLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEACSRIKEFCER 401 (403)
T ss_pred eccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 997531 256788888878899999999999888999999996 678899999999988865
No 50
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.8e-45 Score=346.04 Aligned_cols=350 Identities=23% Similarity=0.395 Sum_probs=293.3
Q ss_pred HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEEecChHHHH
Q 015890 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQAF 102 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~~~g~t~a~ 102 (398)
.+.+.++++|+.|.+...+++.+.+++.+.+.......|++..|..++|+++++++.+.++. +++ ++++|+|+++++
T Consensus 25 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 25 RRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred HhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 34578899999999888778888888888775545678988899999999999999887654 565 799999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~ 181 (398)
..++..++++||+|+++.|+|+.+...++..|++++.+ +.++++. +.++++++++.. ..++++++++|+||||.++
T Consensus 105 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~ 181 (395)
T PRK08175 105 AHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV-PLVEGVD--FFNELERAIRESYPKPKMMILGFPSNPTAQCV 181 (395)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEE-ecccCCC--cHHHHHHHHhhccCCceEEEEeCCCCCCCCCC
Confidence 99999999999999999999999998889999999999 8775542 478888888632 2368999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
+.+++++|+++|+++|+++|+||+| +.+++..... . ..+.+++++|+||.||+||+|+||++.+ +++++.
T Consensus 182 ~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~---~~l~~~ 258 (395)
T PRK08175 182 ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN---PELVSA 258 (395)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC---HHHHHH
Confidence 9999999999999999999999999 5655432111 1 1356788999999999999999999998 889998
Q ss_pred HHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC--CChH
Q 015890 255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH--LDDF 332 (398)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 332 (398)
+........++.+.+.|.++..++...+.++++.++.++++++.+.+.|++++. .+..+.+++|+|++++... .+..
T Consensus 259 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~~g~~i~i~l~~~~~~~~~~ 337 (395)
T PRK08175 259 LARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGW-MVEMPKASMYVWAKIPEPYAAMGSL 337 (395)
T ss_pred HHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccCCCEEEEEEEECCcccCCCCHH
Confidence 887776566777888898888888755567888888999999999999998864 6677778999999998643 2467
Q ss_pred HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+++.++++++||.+.||..|+. ++++||+++. +++.+.+++++|.+++++
T Consensus 338 ~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 338 EFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 8888887789999999988753 4699999984 789999999999988864
No 51
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=6.9e-45 Score=343.01 Aligned_cols=356 Identities=22% Similarity=0.338 Sum_probs=283.4
Q ss_pred HHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEe
Q 015890 21 QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVT 95 (398)
Q Consensus 21 ~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~ 95 (398)
...+...+|+++++|+.|.+ ++++++.+.+++.+.+.. ...|++..|..++|+++++++.+.. ++++++|+++
T Consensus 24 ~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t 101 (404)
T PRK09265 24 EAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIG 101 (404)
T ss_pred HHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEe
Confidence 34444557889999999987 456889999998887654 4679888999999999999997654 4678999999
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~ 174 (398)
+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+. +++.+|++.+++.++.++ ++|++++|+
T Consensus 102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~ 178 (404)
T PRK09265 102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHY-LCDEEAGWFPDLDDIRSKITPRT--KAIVIINPN 178 (404)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhccccc--eEEEEECCC
Confidence 999999999999999999999999999999999999999998888 6653 467789999999987654 999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc-cCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
||||.+++.+++++|+++|+++|+++|+||+| +.+++... . .. ...++++++|+||.+|+||+|+||++.+..
T Consensus 179 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~- 257 (404)
T PRK09265 179 NPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGP- 257 (404)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCc-
Confidence 99999999999999999999999999999999 66554321 1 11 123578899999999999999999996321
Q ss_pred HH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890 249 EG----FATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322 (398)
Q Consensus 249 ~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 322 (398)
+. +++.+... .....+.+.+.|.++..+|...+. ...+..+.+.++++.+.+.|+.++++.+..|.+++|+|+
T Consensus 258 ~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~ 336 (404)
T PRK09265 258 KKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFP 336 (404)
T ss_pred hHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEE
Confidence 33 34444322 223467788999999999964222 122223456777888899998876667788888999999
Q ss_pred eCCCCC---CChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKH---LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 323 ~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+++... .++.+++.+++.++||.+.||..|+ .++++|++++ .+++++++++++|.++++..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 337 KLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred EecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 987431 2345556667779999999999885 3679999997 48899999999999988754
No 52
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=9.3e-46 Score=351.64 Aligned_cols=336 Identities=20% Similarity=0.222 Sum_probs=281.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
...++|+.|.++.+++|.+.+++.+.... ...|++..|..++|+.+++++++..+ .+++|++|+|+++++..++.++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l 161 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAH 161 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHh
Confidence 45788998987777667777777765443 45798888999999999999875432 3568999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~ 188 (398)
+++||.|++++|+|+.+...++..|++++.+ +.++++ +|+|.++++++.+ +++++++ +||||||.+++.+++++
T Consensus 162 ~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~g--~~~~~l~~~~~~~--~k~i~~~p~p~NPTG~~~s~~~~~~ 236 (431)
T PRK15481 162 LLPGDSVAVEDPCFLSSINMLRYAGFSASPV-SVDAEG--MQPEKLERALAQG--ARAVILTPRAHNPTGCSLSARRAAA 236 (431)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHcCCeEEee-ccCCCC--CCHHHHHHHHhcC--CCEEEECCCCCCCCCccCCHHHHHH
Confidence 9999999999999999999999999999999 887665 6899999999764 4888887 99999999999999999
Q ss_pred HHHHHHHc-CCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 189 ISDLCKAA-GSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 189 i~~l~~~~-~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
|.++|+++ ++++|+||+| +.+.+... .....+++++++||||.|+ ||+|+||++.+ +++++.+.........
T Consensus 237 l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~---~~~~~~~~~~~~~~~~ 312 (431)
T PRK15481 237 LRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD---SATSARLRLRLNSGTQ 312 (431)
T ss_pred HHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC---HHHHHHHHHHHhcccc
Confidence 99999999 9999999999 54433211 1123468999999999999 99999999999 7888888766554456
Q ss_pred CcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 265 CASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+.+.+.|.++..+|+.+. .++++.++.++++++.+.+.|++.+. .+..|.+++|+|++++. +..++++.++ ++
T Consensus 313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~-~~~~p~gg~f~~~~l~~---~~~~~~~~l~-~~ 387 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGI-AIPSPGDGLNLWLPLDT---DSQATALTLA-KS 387 (431)
T ss_pred CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccccCCCeEEEEEECCC---CHHHHHHHHH-HC
Confidence 689999999999998743 46788889999999999999988754 66678889999999974 3567888775 79
Q ss_pred CeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 343 gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
||.+.||..|+. .+++||+++..+++++++++++|++++.
T Consensus 388 gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 388 GWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 999999998853 3589999998788999999999998764
No 53
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.9e-45 Score=340.35 Aligned_cols=347 Identities=23% Similarity=0.376 Sum_probs=286.3
Q ss_pred hhHhHHhhccCchHHHHHHHHH-HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 5 AKLAKRALETEMPIMVQIQELV-RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
|++++|++...+..+..+-+.. ..+.+.++|+.|.+..+.++.+.+++.+... ...|++..|.+++|+++++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~ 77 (364)
T PRK07865 1 MPVSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLAR 77 (364)
T ss_pred CCccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHH
Confidence 7789999998887777775444 5567899999998777778888888876543 24798888999999999999988
Q ss_pred hcC---CCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890 84 ENK---LYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159 (398)
Q Consensus 84 ~~~---~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l 159 (398)
.++ +++++|++|+|+++++..++..+ +++||.|+++.|+|+.+...++..|++++.+ +. +++++.
T Consensus 78 ~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~--------~~~l~~-- 146 (364)
T PRK07865 78 RRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRA-DS--------LTELGP-- 146 (364)
T ss_pred HcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEec-CC--------hhhCCc--
Confidence 765 55899999999999999988888 7999999999999999999999999998877 31 222222
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-------cCCcEEEEccccc
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSK 230 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-------~~~~~i~~~s~sK 230 (398)
.+ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||
T Consensus 147 -~~--~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 223 (364)
T PRK07865 147 -QR--PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSK 223 (364)
T ss_pred -cc--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechh
Confidence 22 599999999999999999999999999999999999999999 55544222211 2357899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
.||++|+|+||++++ +++++.+........++.+.+.|.++..+++. .++.++.++.+.++++.+.+.|++.+. .
T Consensus 224 ~~~~~GlRiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~ 298 (364)
T PRK07865 224 QSNLAGYRAGFVAGD---PALVAELLEVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEAAGF-R 298 (364)
T ss_pred ccCCCceeeEEEecC---HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHcCC-c
Confidence 999999999999998 88888888776656678889999999999975 567778888889999999999988764 6
Q ss_pred cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 378 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~ 378 (398)
+..+++++|+|+.++. +..++...+ .++||.+.||..|+ .++++||+++. +++++++++++|+
T Consensus 299 ~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 299 VDHSEAGLYLWATRGE---DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred ccCCCccEEEEEeCCC---CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 7778888999998742 355666655 58999999998775 36799999986 6899999998875
No 54
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=4e-45 Score=344.99 Aligned_cols=336 Identities=24% Similarity=0.400 Sum_probs=272.9
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~g~t~a~ 102 (398)
+.++++|+.|.+++++++.+.+++.+.+.+. ....|++..|.+++|+++++++.+.+ ++++++|++|+|+++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 5679999999999999999999988877641 35679889999999999999987766 46789999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-----------EEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEE
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-----------HILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
..+. .++++||+|++++|+|+.+...++..|.+ ++.+ +.++ +++.+|.+. + .+++|++
T Consensus 113 ~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~d~~~------~--~~k~i~l 182 (409)
T PRK07590 113 GNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL-PCTAENNFVPELPE------E--KVDIIYL 182 (409)
T ss_pred HHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe-ecccccCCcccCcc------c--CceEEEE
Confidence 9865 55689999999999999999999999986 8888 7763 355555321 2 2699999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--cc--CCcEEEEcccccccCCCcceeEEEE
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VE--GDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~--~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... .. .. .+++++++|+||.||+||+|+||++
T Consensus 183 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i 262 (409)
T PRK07590 183 CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTV 262 (409)
T ss_pred eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEE
Confidence 999999999999999999999999999999999999 55544221 11 11 2468999999999999999999999
Q ss_pred ccCCcHHHHHHH------------HHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 244 YPSEVEGFATQL------------LKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 244 ~~~~~~~~~~~l------------~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
++ +++++.+ .........+.+.+.|.++..++.. ...++++.++.++++++.+.+.|+..+ ..
T Consensus 263 ~~---~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~ 338 (409)
T PRK07590 263 VP---KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FE 338 (409)
T ss_pred cC---HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 99 7777621 1111111235788899998888874 346788888899999999999999876 46
Q ss_pred cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+..+.+++|+|++++.. .+..+++.++++++||.+.||+.|+. .+++||++.. +++++++++++|.++
T Consensus 339 ~~~~~g~~f~wi~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 339 VYGGVNAPYIWVKTPDG-MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENVLEAMERIKKA 408 (409)
T ss_pred eecCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHHHHHHHHHHhh
Confidence 77777899999999864 35678888888788999999998864 4699999764 789999999999865
No 55
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=334.79 Aligned_cols=330 Identities=25% Similarity=0.394 Sum_probs=284.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.+.+++++||.+.+++.+.+.. .+.| |+....+++++++++++ ..++++|++++|+++.+..+++++
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~---~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYG---VVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhC---CCCcceEEEcCChHHHHHHHHHHh
Confidence 36999999999999999999999988774 6778 55578899999999883 177899999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+.+||+|+++.|+|..|...++..|.+++.+ +..+ +.+|++.+.+.+.++ +++|++++||||||..++.++++++
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v-~~~~--~~~d~~~~~~~~~~~--~~lv~i~nPNNPTG~~~~~~~l~~l 170 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV-PLKE--FRLDLDAILAAIRDK--TKLVFLCNPNNPTGTLLPREELRAL 170 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHHHhcCCeEEEe-cccc--cccCHHHHHHhhhcC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999 7765 788999999999874 5999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeeceeccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890 190 SDLCKAAGSWLVVDNTYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 267 (398)
++.+.+ +.++|+||+|..|.+..... ..++++++++||||+||++|+|+||++++ +++++.+++.+. +|+.|
T Consensus 171 ~~~~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~---~~~i~~l~~vr~--p~~v~ 244 (356)
T COG0079 171 LEALPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN---PELIAALNKVRP--PFNVS 244 (356)
T ss_pred HHhCCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC---HHHHHHHHHhcC--CCCCC
Confidence 999888 99999999994444422111 14677999999999999999999999999 899999999987 88899
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (398)
.+++.++.++++. .+++++..+.+...++++.+.|++++...++++. +||++++++. .. ...+.+.|+ ++||.++
T Consensus 245 ~~a~~aa~aal~~-~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~-aNFvlv~~~~-~~-~~~l~~~L~-~~giivR 319 (356)
T COG0079 245 SPALAAAIAALRD-ADYLEESVERIREERERLYAALKALGLFGVFPSQ-ANFVLVRVPD-AE-AAALAEALL-KKGILVR 319 (356)
T ss_pred HHHHHHHHHHccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-CcEEEEECCC-cc-HHHHHHHHH-HCCEEEE
Confidence 9999999999997 5889999999999999999999999842366565 9999999986 22 456777775 7899999
Q ss_pred cCCCC-CCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 348 PGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 348 ~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
..... ..++++||+++. .++.++++++|.+++..
T Consensus 320 ~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~ 354 (356)
T COG0079 320 DCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG 354 (356)
T ss_pred eCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence 98652 346799999995 66678888888877653
No 56
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-44 Score=338.35 Aligned_cols=356 Identities=21% Similarity=0.324 Sum_probs=291.2
Q ss_pred HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecC
Q 015890 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG 97 (398)
Q Consensus 18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g 97 (398)
.+........++.++++|+.|.+.+++++.+.+++.+.+.......|++..|..++|+.+++++ ++++++|++++|
T Consensus 16 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g 91 (380)
T PRK06225 16 TSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----GLDDDEALITAG 91 (380)
T ss_pred hHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCC
Confidence 3344333444567899999999999999999999999887655567877889999999999987 678889999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 98 ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 98 ~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
+++++..++.+++.+||+|++++|+|..+...++..|.+++.+ +++ ++++.+|++.+++.+++++ +++++++|+|
T Consensus 92 ~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~N 168 (380)
T PRK06225 92 ATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEV-PIYSEECNYKLTPELVKENMDENT--RLIYLIDPLN 168 (380)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEee-ccccccCCccCCHHHHHhhcCCCc--eEEEEeCCCC
Confidence 9999999999999999999999999999888889999999988 763 3357889999999998654 8999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
|||.+++.+++++|+++|+++|+++|+||+| +............++++++.|+||.+|++|+|+||++++ +++++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~---~~l~~ 245 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT---PDLIE 245 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC---HHHHH
Confidence 9999999999999999999999999999999 443221111223467899999999999999999999998 78888
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCCChH
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 332 (398)
.+..... ..++.+.+.+.++..++.....+.++..+.++++++.+.+.|+++++..+ ..+.+++|+|+.++....+..
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 324 (380)
T PRK06225 246 VVKSIVI-NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPE 324 (380)
T ss_pred HHHHHHh-cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHH
Confidence 8776542 35667888888888888764566777777777788888888887544222 234558899999875434678
Q ss_pred HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
++..+|. ++||.++||..|+ .++++|++++. +++++++++++|+++++++++
T Consensus 325 ~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 325 DLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence 8888886 8899999997664 24699999996 789999999999999987754
No 57
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.9e-45 Score=345.39 Aligned_cols=351 Identities=21% Similarity=0.334 Sum_probs=282.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhc-----------CCCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEE
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVW-----------DPSISKYGADEGLPELRDALVKKLNQENK----LYKSSVM 93 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~-----------~~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~ 93 (398)
..++|+|+.+.|.+- .+++.+.+.+... -.....|.+..|..++|+++++++.+.++ +++++|+
T Consensus 46 p~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Iv 124 (447)
T PLN02607 46 PSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIV 124 (447)
T ss_pred CCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeE
Confidence 455999999998764 6677777666432 01234577778999999999999998754 5789999
Q ss_pred EecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCC-CCCCCCChHHHHHhhcc----CCCCeE
Q 015890 94 VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKL 167 (398)
Q Consensus 94 ~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~----~~~~~~ 167 (398)
+|+|++++++.++.+++++||.|+++.|.|+++...++ ..|++++.+ +.+ .+++.+|++.++++++. +.++|+
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v-~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPI-HCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEE-eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 99999999999999999999999999999999987776 578999988 765 34577899999998874 233699
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc----------ccCCcEEEEcccccccCC
Q 015890 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC----------VEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 168 v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~----------~~~~~~i~~~s~sK~~~~ 234 (398)
+++++|+||||.+++.+++++|+++|+++|+++|+||+| +.|++.+. +. ...++++++.|+||.||+
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 999999999999999999999999999999999999999 44543221 11 114678999999999999
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
+|+|+||+++.+ +++++.+..... ....+.+.|.++..+|++.. .++.+.++++.++++.+.+.|++.+. .+
T Consensus 284 ~GlRvG~ivs~n--~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi-~~ 358 (447)
T PLN02607 284 PGFRVGTIYSYN--DKVVTTARRMSS--FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGI-EC 358 (447)
T ss_pred CcceEEEEEEcC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Confidence 999999999853 677776655432 23467889999999998632 45567777888889999999998764 67
Q ss_pred ccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..+.+|+|+|+++++.. ....++++++++++||.+.||..|+. ++|+||+++..+++.+++++++|.+++++.
T Consensus 359 ~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 359 LKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred ccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 77888999999997421 12346777788778999999998864 789999999767899999999999999765
Q ss_pred hc
Q 015890 385 VK 386 (398)
Q Consensus 385 ~~ 386 (398)
..
T Consensus 439 ~~ 440 (447)
T PLN02607 439 KT 440 (447)
T ss_pred Hh
Confidence 43
No 58
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-45 Score=348.65 Aligned_cols=349 Identities=22% Similarity=0.330 Sum_probs=274.7
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh-hhcC--C-C--CCcEEEecChHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN-QENK--L-Y--KSSVMVTAGANQAFV 103 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~-~~~~--~-~--~~~v~~~~g~t~a~~ 103 (398)
.+.++|+.|.+++++|+.+.+++. .+.. ..|+++.|..++|+++++++. +..+ . + .++|++|+|+++++.
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~~-~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~ 175 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELVD-GIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMC 175 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHH-HHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence 357999999999999888888554 4432 259999999999999998554 3322 1 2 248999999999999
Q ss_pred HHHHH-----hccCCCEEEEeCCCCcChhhHHHhcC--cEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 104 ~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g--~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
.++.+ ++++||+|+++.|+|+.|...++..| ++++.+ +.+ +++|.+|.+.+++++++++ |+|++++|+|
T Consensus 176 ~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v-~~~~~~~f~~d~~~l~~~~~~~t--kai~l~nP~N 252 (527)
T PRK09275 176 YIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHI-NADEENEWQYPDSELEKLRDPSI--KALFLVNPSN 252 (527)
T ss_pred HHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEe-ecCcccCCCCCHHHHHhhcCCCC--CEEEEeCCcC
Confidence 99986 68999999999999999999887775 566666 554 4568999999999887665 9999999999
Q ss_pred CCccCCCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC--cH
Q 015890 176 PSGTYIPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE 249 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~--~~ 249 (398)
|||.+++.+++++|+++|++ +++++|+||+| +.+.........+++++++.|+||.||++|||+||++++++ ..
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~ 332 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD 332 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence 99999999999999999964 59999999999 54321111112346899999999999999999999999852 00
Q ss_pred HHHHHH--------------------------------HHhhccCCCCcchHHHHHH-----HHHhcCCchHHHHHHHHH
Q 015890 250 GFATQL--------------------------------LKVQDNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL 292 (398)
Q Consensus 250 ~~~~~l--------------------------------~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ 292 (398)
++++.+ .......+.+.+.+.|.++ .++++..+.+.++.++.+
T Consensus 333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~ 412 (527)
T PRK09275 333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDII 412 (527)
T ss_pred HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 122222 3444556778888888873 344655457788888999
Q ss_pred HHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCCCC-CC
Q 015890 293 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG 356 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~ 356 (398)
+++++.+.+.|.. +. ....+.+++|+|++++.. ..++.+++.+|+++.||.+.||+.|+. ++
T Consensus 413 ~~Rr~~l~~~Lg~-~~-~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~ 490 (527)
T PRK09275 413 RRRYKALYEGLGL-PE-PEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEW 490 (527)
T ss_pred HHHHHHHHHHcCC-CC-cCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCC
Confidence 9999999888832 22 334688899999998631 125788999999999999999999974 57
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 357 HLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
++|+|++..+++++.+++++|.+++.++.++
T Consensus 491 ~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~ 521 (527)
T PRK09275 491 SVRVSLANLNEEDYAKIGKAIRKLLDEYYEE 521 (527)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999778899999999999999887654
No 59
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1e-44 Score=346.11 Aligned_cols=350 Identities=21% Similarity=0.316 Sum_probs=277.0
Q ss_pred CCeEEcCCccCCC--CC-cHHHHHHHHHhhcC-------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEe
Q 015890 30 KNAVSLAQGVVYW--QP-PKMAMEKVKELVWD-------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVT 95 (398)
Q Consensus 30 ~~~~~l~~g~~~~--~~-~~~v~~a~~~~~~~-------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~ 95 (398)
.++|+|+.+.|++ .. ++.+.+.....+.. .....|++..|.+++|+++++++.+.+| +++++|++|
T Consensus 46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit 125 (496)
T PLN02376 46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMS 125 (496)
T ss_pred CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEc
Confidence 4699999999887 32 44554443332111 1245688889999999999999998766 679999999
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCCC-CCCCCChHHHHHhhc----cCCCCeEEE
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSS-KTLHPDADWLEKTLE----TKPTPKLVS 169 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~----~~~~~~~v~ 169 (398)
+|++++++.++.+++++||.|+++.|+|+++...++ ..|++++.+ +.+. +++.+|++.+++.++ ...++++|+
T Consensus 126 ~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v-~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~ 204 (496)
T PLN02376 126 GGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPV-PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI 204 (496)
T ss_pred cchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEE-eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence 999999999999999999999999999999998777 589999999 7753 457889999987643 123479999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c---------cCCcEEEEcccccccCCC
Q 015890 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V---------EGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 170 i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~---------~~~~~i~~~s~sK~~~~~ 235 (398)
+++|+||||.+++.+++++|+++|+++|+++|+||+| +.|++.+... . ..+.+++++|+||.||+|
T Consensus 205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp 284 (496)
T PLN02376 205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP 284 (496)
T ss_pred EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence 9999999999999999999999999999999999999 5565432211 1 013467789999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+|+||+++++ +.+.+.+..... ....+.+.|.++..+|+... .++.+.++.+.++++.+.+.|++.+. .+.
T Consensus 285 GlRvG~li~~~--~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi-~~~ 359 (496)
T PLN02376 285 GFRVGIVYSFN--DSVVSCARKMSS--FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI-ACL 359 (496)
T ss_pred cceEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccc
Confidence 99999999864 566665544432 33578899999999998621 34455677788888999999988754 677
Q ss_pred cCCccEEEEeeCCCCCC------ChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKHL------DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+.+|+|+|+++++... +..+++..++++.||.+.||+.|+ .++++||+++..+++++++++++|.+++.+.
T Consensus 360 ~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 360 TSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred CCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHh
Confidence 78889999999975321 235678888877899999999885 4689999999767899999999999999754
Q ss_pred h
Q 015890 385 V 385 (398)
Q Consensus 385 ~ 385 (398)
.
T Consensus 440 ~ 440 (496)
T PLN02376 440 K 440 (496)
T ss_pred h
Confidence 4
No 60
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-44 Score=340.62 Aligned_cols=347 Identities=28% Similarity=0.405 Sum_probs=296.8
Q ss_pred CCeEEcCCccCCCC--CcHHHHHHHHHhhcC--CC-CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890 30 KNAVSLAQGVVYWQ--PPKMAMEKVKELVWD--PS-ISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (398)
Q Consensus 30 ~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~--~~-~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~ 102 (398)
...++|+.|.++.. +.....+.+.+.+.. .. ...|.+..|..++|+.+++++....| +++++|++|+|+++|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 78999999875543 333444455555432 22 56787889999999999999985555 4578999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYI 181 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~ 181 (398)
+++.+.++++||.|++++|+|++....++..|++++.+ |+|++| +|+|.|++.++..+ +|+++++ +.+||||.++
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v-p~d~~G--~~~e~le~~~~~~~-~k~~y~~P~~qNPtG~tm 244 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV-PVDEDG--IDPEALEEALAQWK-PKAVYVTPTFQNPTGVTM 244 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec-CCCCCC--CCHHHHHHHHhhcC-CcEEEECCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999 999776 59999999998764 7998888 6699999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+.+..++|+++|++||+++|.|+.| +.+++.+.. .+..+++++++||||.+. ||+|+||++++ +++++++
T Consensus 245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p---~~~~~~~ 320 (459)
T COG1167 245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP---PELIEKL 320 (459)
T ss_pred CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC---HHHHHHH
Confidence 9999999999999999999999999 777754432 223589999999999996 99999999999 8999999
Q ss_pred HHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCC--CCccccCCccEEEEeeCCCCCCCh
Q 015890 256 LKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
...+.....+++.+.|.+++..+..+ +.++++.++.++++++.+.+.|+++. ...+..|.+|+|+|+++++.. +.
T Consensus 321 ~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~-~~ 399 (459)
T COG1167 321 LRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-DA 399 (459)
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-CH
Confidence 99888889999999999999999864 47889999999999999999999864 467778998999999999864 67
Q ss_pred HHHHHHHHHhcCeEEec-CCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 332 FEVVRWLAHRHGVVVIP-GGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~-g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.++....+ ++|+.+.| |..|.. .+++|++++..+++++++++.+|.+++++...
T Consensus 400 ~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 400 RELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred HHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 77887765 88999999 877753 34899999998899999999999999987653
No 61
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.1e-45 Score=340.63 Aligned_cols=328 Identities=20% Similarity=0.303 Sum_probs=276.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
++++.++|+.|.|++++|+.+++++.+.+.. ...| +..|..++|+++++++ ++++++|++|+|+++++..++.
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 5678999999999999999999999887654 2346 6778899999999997 7889999999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|+.+...++..|.+++.+ +.++ +.+|++.+++.+++++ +++++++||||||.+++.++++
T Consensus 100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~--~~~d~~~l~~~~~~~~--~~v~i~~P~NPTG~~~~~~~l~ 174 (366)
T PRK01533 100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEV-ALNN--GVYDLDEISSVVDNDT--KIVWICNPNNPTGTYVNDRKLT 174 (366)
T ss_pred HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEe-ecCC--CCcCHHHHHHHhCcCC--cEEEEeCCCCCCCCCcCHHHHH
Confidence 999999999999999999999999999999999 7753 3579999999987654 8999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCC-cc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGR-KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~-~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
+|+++|++++ ++|+||+| +.+.+. .. .....+++++++|+||.||++|+|+||++++ +++++.+.....
T Consensus 175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~---~~~~~~l~~~~~- 249 (366)
T PRK01533 175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH---EELIEKLNVVRL- 249 (366)
T ss_pred HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC---HHHHHHHHHhcC-
Confidence 9999998766 67789999 444321 11 1113568999999999999999999999998 889998887653
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+++.+.++|.++..+|+. .++.++..+...++++++.+.++.++. .+..+. ++|+|++++ +..++.+.|+ +
T Consensus 250 -~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~g~-~~~~~~-~nf~~~~~~----~~~~~~~~l~-~ 320 (366)
T PRK01533 250 -PFNVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKENEI-PFYQSQ-TNFIFLPVE----NGGEIYEACA-H 320 (366)
T ss_pred -CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCc-CcEEEEeCC----CHHHHHHHHH-H
Confidence 578999999999999975 577777778888888888888887764 666665 889999986 3567777775 8
Q ss_pred cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhccc
Q 015890 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
+||.|++ | ++++||+++. .++.++++++|++.+....+..
T Consensus 321 ~GI~Vr~---~--~~~iRis~~~--~~~~~~l~~al~~~~~~~~~~~ 360 (366)
T PRK01533 321 AGFIIRP---F--PNGVRITVGT--REQNEGVISVLQQHFENKKRKS 360 (366)
T ss_pred CCcEEcc---C--CCceEEeCCC--HHHHHHHHHHHHHHHHhccccc
Confidence 9999998 2 5889999995 7899999999998887765443
No 62
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.1e-44 Score=344.52 Aligned_cols=366 Identities=24% Similarity=0.352 Sum_probs=286.8
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcC--C-CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCc
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD--P-SISKYGADEGLPELRDALVKKLNQENK--LYKSS 91 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~ 91 (398)
+.++++.... +..++++|..+.+.++ ..+++++.+.+.. + ..+.|+++.|.+++|+.+++++.++.| +++++
T Consensus 117 ~~~r~v~~~~-~~p~~i~~~~~~~~fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~ 193 (534)
T PLN02231 117 TFFREVLALC-DHPSLLDKSETHGLFS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPND 193 (534)
T ss_pred HHHHHHHHhc-cCCccCCCCCccccCC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCccc
Confidence 3344444333 3467888886655554 4666666666653 2 367799999999999999999988765 56899
Q ss_pred EEEecChHHHHHHHHHHhcc-CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC----CCC
Q 015890 92 VMVTAGANQAFVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTP 165 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~----~~~ 165 (398)
|++|+|+++++..++.+++. +||.|+++.|+|+.+...++..|.+++.+ +.++ ++|.+|+++|++.++.. ..+
T Consensus 194 I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-~l~~~~~~~~d~~~Le~~l~~~~~~~~~~ 272 (534)
T PLN02231 194 IFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPY-YLDEATGWGLEISELKKQLEDARSKGITV 272 (534)
T ss_pred EEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEE-ecCcccCCCCCHHHHHHHHHHHhhcCCCe
Confidence 99999999999999999984 79999999999999999999999999999 8775 46889999999998641 136
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccccc-----------cCCcEEEEcccccc
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHCCV-----------EGDHVVNLFSFSKA 231 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~~~-----------~~~~~i~~~s~sK~ 231 (398)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.|+ +...... ...++++++|+||.
T Consensus 273 k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~ 352 (534)
T PLN02231 273 RALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKG 352 (534)
T ss_pred EEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcc
Confidence 99999999999999999999999999999999999999999 6664 2222110 11258999999997
Q ss_pred c-CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---c----h---HHHHHHHHHHHHHHHHH
Q 015890 232 Y-GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---P----E---WVTERVKDLVRNREIIR 300 (398)
Q Consensus 232 ~-~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~---~~~~~~~~~~~~~~~l~ 300 (398)
+ |++|+|+||+++....+++++.+..... ...+.+...|.++..+++.. + . +..+..+.++++++.+.
T Consensus 353 ~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~ 431 (534)
T PLN02231 353 YYGECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLE 431 (534)
T ss_pred cccCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 7899999999863111788888876654 35677888898888888631 1 1 22344678888999999
Q ss_pred HHhccCCCCccccCCccEEEEeeC--CCCC---------CChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCC
Q 015890 301 EALSPLGEGAVKGGEGAIYLWARL--PEKH---------LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLV 366 (398)
Q Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~ 366 (398)
+.|++++++.+..|++++|+|+++ +... ..+..++.+|+++.||.+.||+.|+. ..++|+++. .+
T Consensus 432 ~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~ 510 (534)
T PLN02231 432 DALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQ 510 (534)
T ss_pred HHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CC
Confidence 999988667888899999999555 3210 12344667788889999999999974 347999997 48
Q ss_pred HHHHHHHHHHHHHHHHHHhccc
Q 015890 367 EDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
++++++++++|.++++++.++.
T Consensus 511 ~e~l~eal~RL~~~~~~~~~~~ 532 (534)
T PLN02231 511 EDKIPAIVSRLTEFHKSFMDEF 532 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999987654
No 63
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-45 Score=339.20 Aligned_cols=335 Identities=22% Similarity=0.320 Sum_probs=270.8
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~ 104 (398)
..+++|+.|.+++++|+.+.+++.+.+.... ...| +..|..++|+++++++++.++ +++++|++|+|+++++..
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~ 106 (374)
T PRK02610 28 IQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRS 106 (374)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHH
Confidence 3589999999999999999999998776532 3568 457899999999999987653 678999999999999998
Q ss_pred HHHHhccCCC-EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015890 105 IVLTLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 105 ~~~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~ 181 (398)
++.+++.+|| +|+++.|+|..+...++..|++++.+ +.+++++.+|++++++.++. ..++++|++++||||||.++
T Consensus 107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~ 185 (374)
T PRK02610 107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRV-GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL 185 (374)
T ss_pred HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEe-cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC
Confidence 8888877775 89999999999999999999999999 87766678999999999874 12369999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
+.++++++.++| +++++|+||+| |.+..........+++++++|+||.||+||+|+||++++ +++++.+....
T Consensus 186 s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~---~~l~~~l~~~~ 260 (374)
T PRK02610 186 TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH---PELIAVLEKVR 260 (374)
T ss_pred CHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecC---HHHHHHHHHhc
Confidence 999999999876 38999999999 433211111223457889999999999999999999998 88988887766
Q ss_pred ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890 260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 339 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 339 (398)
. .++.+.+.|.++..+++..+.+.+. .+.+.+.++.+.+.|++++.+.+. |.+++|+|++++.. .+..++++.+
T Consensus 261 ~--~~~~~~~~q~a~~~~l~~~~~~~~~-~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~-~~~~~~~~~l- 334 (374)
T PRK02610 261 L--PYNLPSFSQLAAQLALEHRQELLAA-IPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQD-AALAALHQAL- 334 (374)
T ss_pred C--CCCCCHHHHHHHHHHhcCHHHHHHH-HHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCC-CCHHHHHHHH-
Confidence 3 4667889999999888764344444 344445577788888877554544 67799999999754 3567788776
Q ss_pred HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 340 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++||.++++ ++++||+++. .+++++++++|++++.++
T Consensus 335 ~~~gi~v~~~-----~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 335 KAQGTLVRHT-----GGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred HHCCEEEEeC-----CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 5899999863 5789999985 567899999999887653
No 64
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=7.8e-44 Score=335.41 Aligned_cols=336 Identities=25% Similarity=0.411 Sum_probs=268.6
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+.++++|+.|.+++++++.+.+++.+.+.+. ....|++..|.+++|+++++++.+. ++++++|++|+|+++++..
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~ 110 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFR 110 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHH
Confidence 5789999999999999999999998877642 2356888899999999999986432 4788999999999999998
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCc-----------EEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-----------THILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+. .++.+||+|+++.|+|..+...++..|+ +++.+ +.++ +++.+|++. .. .+++|++++
T Consensus 111 l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~-----~~--~~~~i~l~n 181 (402)
T TIGR03542 111 LQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYL-PCTKENNFIPDLPE-----EP--KIDIIYLCS 181 (402)
T ss_pred HH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEe-ecchhhCCCCCccc-----cC--CceEEEEeC
Confidence 64 5568899999999999999999999999 88888 7653 456555321 12 259999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccc--cc--CCcEEEEcccccccCCCcceeEEEEcc
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCC--VE--GDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~--~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
||||||.+++.+++++|+++|+++|+++|+||+| +.+++. +... .. .+++++++|+||.||+||+|+||++++
T Consensus 182 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~ 261 (402)
T TIGR03542 182 PNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP 261 (402)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence 9999999999999999999999999999999999 555442 1111 11 246899999999999999999999998
Q ss_pred CCcHHHH--------HHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 246 SEVEGFA--------TQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 246 ~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
++++ +.+.........+.+.+.|.++..++... ..+..+..+.++++++.+.+.|++.+ ..+..+.+
T Consensus 262 ---~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~ 337 (402)
T TIGR03542 262 ---KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEH 337 (402)
T ss_pred ---HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCc
Confidence 5665 22222222223357888998888888752 24566667788888999999998875 46777778
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
++|+|++++.. .++.+++.++++++||.++||+.|+. .+++||+++. +++++++++++|+++
T Consensus 338 ~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 338 APYLWVKTPEG-ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEACERIKEA 401 (402)
T ss_pred eeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHhh
Confidence 99999999863 35678888888778999999998764 5799999875 789999999999875
No 65
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-44 Score=332.55 Aligned_cols=325 Identities=25% Similarity=0.352 Sum_probs=272.0
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+.++++|+.|.+++++||.+.+++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|++++++.+++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 4578999999999999999999999887654 56784 578899999999987 6889999999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
+++++||.|++++|+|..+...++..|..++.+ +.+. +++.++.+.+++... + +++|++++||||||.+++.+++
T Consensus 101 ~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~-~--~k~i~l~~p~NPTG~~~s~~~~ 176 (357)
T PRK14809 101 AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREY-PVSKADDFEQTADTVLDAYD-G--ERIVYLTSPHNPTGSEIPLDEV 176 (357)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEE-ecccCcCCCcCHHHHHHhhc-C--CcEEEEeCCCCCCCcCCCHHHH
Confidence 999999999999999988888888899998888 7653 467788888777653 2 5899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
++|+++|++ ++++|+||+| +.+.+.... ....+++++++|+||.||++|+|+||++++ +++++.+.+... +
T Consensus 177 ~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~---~~~~~~~~~~~~--~ 250 (357)
T PRK14809 177 EALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARVNT--P 250 (357)
T ss_pred HHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC---HHHHHHHHHhCC--C
Confidence 999999875 7899999999 554332111 123468999999999999999999999999 788888877653 5
Q ss_pred CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
++.+.+.+.++..++.. .+++++.++.++++++.+.+.|+... . +.+++|+|++++ +..++++.+ .++|
T Consensus 251 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~~~g~f~~~~~~----~~~~~~~~l-~~~g 319 (357)
T PRK14809 251 FAASELACRAGLAALDD-DEHVERTVETARWAREYIREELDAPT----W-ESAGNFVLAEVG----DASAVAEAA-QERG 319 (357)
T ss_pred CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCcc----C-CCCCCEEEEECC----CHHHHHHHH-HHCC
Confidence 67788999998888875 67788888888889999999887532 2 456899999885 356788776 5889
Q ss_pred eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
|.+++|..|+.+++||++++. .+++++++++|+++++
T Consensus 320 v~v~~g~~f~~~~~iRls~~~--~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 320 VIVRDCTSFGLPECIRITCGT--REETERAVEVLNEVLA 356 (357)
T ss_pred EEEEECccCCCCCeEEEecCC--HHHHHHHHHHHHHHhc
Confidence 999999999878899999874 6899999999988764
No 66
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-43 Score=328.13 Aligned_cols=326 Identities=17% Similarity=0.306 Sum_probs=271.1
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.++.++|+.+.+++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|+++++..++.++
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHHh
Confidence 45799999999998899999999987643 56684 456789999999998 688999999999999999999987
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
.+ ++|+++.|+|+.+...++..|.+++.+ +.+. +++.+| +.+.+.+..+ ++++++++|+||||.+++.+++++
T Consensus 92 -~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d-~~~~~~~~~~--~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 92 -KP-KKVLILAPTFAEYERALKAFDAEIEYA-ELTEETNFAAN-EIVLEEIKEE--IDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred -CC-CcEEEecCChHHHHHHHHHcCCeeEEE-eCccccCCCcc-HHHHHhhccC--CCEEEEeCCCCCCCCccCHHHHHH
Confidence 33 689999999999999999999999999 7764 457788 6666666544 599999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
|+++|+++|+++|+||+| +.+++.... ....+++++++|+||.||++|+|+||+++++ +.+++.+.....
T Consensus 166 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~--~~~~~~~~~~~~-- 241 (354)
T PRK06358 166 ILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMRE-- 241 (354)
T ss_pred HHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence 999999999999999999 665543222 1234689999999999999999999999864 677788877664
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
.++.+.+.|.++..+++. ..++++..+.++++++.+.+.|++.++..+..+. ++|+|++++. ..++.+.++ ++
T Consensus 242 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~----~~~~~~~l~-~~ 314 (354)
T PRK06358 242 PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKLEK----PIDLRKELL-KK 314 (354)
T ss_pred CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEcCc----hHHHHHHHH-HC
Confidence 577889999999999974 4667888888999999999999887665666665 7799999873 468888776 78
Q ss_pred CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
||.+++|..|+. +++|||+++. .++.++++++|.+++
T Consensus 315 gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 315 GILIRSCSNYRGLDENYYRVAVKS--REDNKKLLKALEVIL 353 (354)
T ss_pred CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 999999998843 5789999995 778888888887654
No 67
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-42 Score=327.05 Aligned_cols=340 Identities=27% Similarity=0.463 Sum_probs=279.9
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~ 104 (398)
+.+.++|+.|.+++++++.+.+++.+.+... ....|++..|..++|+.+++++.+.++ +++++|++++|+++++..
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~ 111 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV 111 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence 4668999999888888899999988876532 256798889999999999999987664 578999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
++.+++++||.|++++|+|..+...++..|++++.+ +.+++++.+|++++++.+++++ ++|++++|+||||.++|.+
T Consensus 112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~~~ 188 (394)
T PRK06836 112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEAAITPKT--KAVIINSPNNPTGVVYSEE 188 (394)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEE-ecCCccCcCCHHHHHhhcCcCc--eEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999999999999 8877667789999999997654 9999999999999999999
Q ss_pred HHHHHHHHHHH------cCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH-
Q 015890 185 LLKRISDLCKA------AGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT- 253 (398)
Q Consensus 185 ~l~~i~~l~~~------~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~- 253 (398)
++++|+++|++ ||+++|+||+| +.+++.... ....+++++++|+||.||+||+|+||++++ +++.+
T Consensus 189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~---~~~~~~ 265 (394)
T PRK06836 189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN---PEMEDA 265 (394)
T ss_pred HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC---HHHhhh
Confidence 99999999999 89999999999 655442211 223568999999999999999999999998 44322
Q ss_pred -----HHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 254 -----QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 254 -----~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
.+...... ...+.+.+.|.++...++.. ...+.++++++.+.+.|++++. .+..+.+++|+|+.++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~r~~l~~~L~~~g~-~~~~~~gg~~~~~~~~~- 338 (394)
T PRK06836 266 DDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-----VDVSIYKRNRDLLYDGLTELGF-ECVKPQGAFYLFPKSPE- 338 (394)
T ss_pred HHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHhCCC-EeecCCceEEEEEeCCC-
Confidence 22112221 12456788888888888752 1245567778888889888764 77778889999999875
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+..+++..+ .++||.+.||..|+.++++||+++. +++++++++++|+++++.+
T Consensus 339 -~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 339 -EDDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -CCHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 2567777655 5889999999988878899999995 8999999999999998764
No 68
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=5.9e-44 Score=337.23 Aligned_cols=345 Identities=21% Similarity=0.298 Sum_probs=265.6
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH-HHHhhhcC--C-CCC--cEEEecChHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV-KKLNQENK--L-YKS--SVMVTAGANQAFVN 104 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~-~~l~~~~~--~-~~~--~v~~~~g~t~a~~~ 104 (398)
+.++|+.|.++++++ +.+.++.+.+.. ..|++..+..++++++. +++++.++ . +++ +|++|+|+++|+..
T Consensus 95 ~~i~l~~g~p~~~~~-~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~ 170 (521)
T TIGR03801 95 DIISYVIDQLGFDPD-AFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCY 170 (521)
T ss_pred HHHhhcCCCCCCCCC-HHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 579999999999855 445655555432 25876777777777776 56666543 2 333 89999999999999
Q ss_pred HHHH-----hccCCCEEEEeCCCCcChhhHHHhc--CcEEEEeccCCC-CC-----CCCChHHHHHhhccCCCCeEEEEe
Q 015890 105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMT--GVTHILVGPCSS-KT-----LHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 105 ~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~-~~-----~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
++.+ ++++||+|+++.|+|++|...++.. |++++.+ +.++ ++ |.+|.+.++++++++ +++++++
T Consensus 171 ~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i-~~~~~~~~g~~~~~~d~~~l~~~~~~~--~kai~l~ 247 (521)
T TIGR03801 171 IFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI-KADEMTEDGTHTWQYPDKELEKLRDPS--IKALFVV 247 (521)
T ss_pred HHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe-ecccccccccccCCCCHHHHHHhcCCC--CcEEEEe
Confidence 9987 6899999999999999999887765 6788887 6542 22 889999999987765 4999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
+|+||||.+++.+++++|+++|+++ ++++|+||+| |.+..........++++++.|+||.||++|||+||++.++
T Consensus 248 nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~- 326 (521)
T TIGR03801 248 NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK- 326 (521)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc-
Confidence 9999999999999999999999986 9999999999 5442222222234689999999999999999999999884
Q ss_pred cHH----HHHH--------H------------------------HHhhccCCCCcchHHHH-----HHHHHhcCCchHHH
Q 015890 248 VEG----FATQ--------L------------------------LKVQDNIPICASIISQH-----LALYSLQTGPEWVT 286 (398)
Q Consensus 248 ~~~----~~~~--------l------------------------~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~ 286 (398)
.. +++. + +......+.+.+.+.|. ++.++++..+.+.+
T Consensus 327 -~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~ 405 (521)
T TIGR03801 327 -DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKA 405 (521)
T ss_pred -hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHH
Confidence 21 2211 1 22333445667777776 34455555457788
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC---------------CChHHHHHHHHHhcCeEEecCCC
Q 015890 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH---------------LDDFEVVRWLAHRHGVVVIPGGA 351 (398)
Q Consensus 287 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ll~~~gi~v~~g~~ 351 (398)
+..+.++++++.+.+.|. .. .....+.+++|+|+++++.. .++.+++.+|+++.||.+.||..
T Consensus 406 ~~~~~~~~R~~~l~~~Lg-~~-~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~ 483 (521)
T TIGR03801 406 ETKDICRRREKLLFRGLG-LP-LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGG 483 (521)
T ss_pred HHHHHHHHHHHHHHHhcC-CC-CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchh
Confidence 888899999999999882 22 13355778999999997421 15678999999999999999999
Q ss_pred CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 352 CGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 352 ~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
|+. .+++|||++..+++++.++.++|.+.+.++.+
T Consensus 484 Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 484 FGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 975 46899999866889999999999999987654
No 69
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-44 Score=331.56 Aligned_cols=325 Identities=22% Similarity=0.293 Sum_probs=272.1
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
..++++|+.|.++++++|.+.+++.+.+.. ..|.+..+..++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 28 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 28 LEKIVKLASNENPYGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHHHHH
Confidence 348999999999998899999999887654 23557788999999999998 67789999999999999999999
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++++||+|++++|+|+.+...++..|.+++.+ +.+ ++.+|++.+++.++++ ++++++++|+||||.+++.+++.+
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~d~~~l~~~~~~~--~~~v~i~~p~NPtG~~~~~~~l~~ 175 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREV-PLK--DGGHDLEAMLKAIDEQ--TKIVWICNPNNPTGTYVNHEELLS 175 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEE-ecC--CCCcCHHHHHHhcCCC--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999998 776 3457999999988765 489999999999999999888888
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
+++.|+ +|+++|+||+| +.+.+.... ....+++++++|+||.||++|+|+||++++ +++++.+.....
T Consensus 176 ~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~~-- 249 (359)
T PRK03158 176 FLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS---EELIEKLNIARP-- 249 (359)
T ss_pred HHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC---HHHHHHHHHhcC--
Confidence 887764 69999999999 544432111 113468999999999999999999999998 788888877664
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
.++.+.++|.++..+++. .++.++..+.++++++.+.+.|++.+. .+.++ +++|+|++++. +..++++.|+ ++
T Consensus 250 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~g~~i~~~~~~---~~~~~~~~l~-~~ 322 (359)
T PRK03158 250 PFNTTRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKEYGL-FYYPS-QTNFIFVDTGR---DANELFEALL-KK 322 (359)
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eeCCC-cCcEEEEECCC---CHHHHHHHHH-HC
Confidence 467899999999999975 567777777788888889888887753 55544 48899998852 5678888886 78
Q ss_pred CeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 343 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
||.++||..|+.++++||+++. .+++++++++|+++
T Consensus 323 gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~ 358 (359)
T PRK03158 323 GYIVRSGAALGFPTGVRITIGL--KEQNDKIIELLKEL 358 (359)
T ss_pred CeEEeeCCCCCCCCeEEEecCC--HHHHHHHHHHHHHh
Confidence 9999999988878899999994 78888888888764
No 70
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-43 Score=329.29 Aligned_cols=324 Identities=24% Similarity=0.349 Sum_probs=267.1
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+.++++|+.|.+++++||.+++++.+. .. ...| +..+..++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~~~~~ 122 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM-KF--PYVY-PDPESRRLRAALAEDS----GLESENILVGCGADELIDLLMRC 122 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh-Hh--hccC-CCCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHHHHHH
Confidence 568999999999999999999988652 11 3457 4556789999999987 67889999999999999999999
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
++++||+|+++.|+|..+...++..|.+++.+ +.++ ++.+|++.+++.+ +++ +++|++++|+||||.+++.++++
T Consensus 123 ~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~--~~~v~l~~P~NPTG~~~~~~~l~ 198 (380)
T PLN03026 123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKV-PRTP-DFSLDVPRIVEAVETHK--PKLLFLTSPNNPDGSIISDDDLL 198 (380)
T ss_pred hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHHhccC--CcEEEEeCCCCCCCCCCCHHHHH
Confidence 99999999999999998988889999999998 7753 4678999999998 454 59999999999999999977777
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+|++.+ +++|+||+| |.+.+.... ....+++++++|+||.||++|+|+||++++ +++++.+.+... .+
T Consensus 199 ~l~~~~----~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~---~~~i~~l~~~~~--~~ 269 (380)
T PLN03026 199 KILELP----ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQ--PY 269 (380)
T ss_pred HHHhcC----CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC---HHHHHHHHHhcC--CC
Confidence 776542 899999999 544332111 123578999999999999999999999999 889988877765 56
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
+.+.++|.++.++|+. .+++++.++.+.++++.+.+.|+++++..+ .+.+++|+|++++.. .+..++.+.|+ ++||
T Consensus 270 ~~~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~l~-~~gI 345 (380)
T PLN03026 270 NVSVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-RDAKKLKEDLA-KMGV 345 (380)
T ss_pred CCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-CCHHHHHHHHH-HCCe
Confidence 7889999999999975 577888888999999999999998876444 456699999998743 35678888886 8999
Q ss_pred EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
.++++..++.++++|||++. .+++++++++|++
T Consensus 346 ~v~~~~~~~~~~~lRis~~~--~~~~~~l~~al~~ 378 (380)
T PLN03026 346 MVRHYNSKELKGYIRVSVGK--PEHTDALMEALKQ 378 (380)
T ss_pred EEEECCCCCCCCEEEEecCC--HHHHHHHHHHHHH
Confidence 99998766567899999995 5667777777654
No 71
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-43 Score=332.69 Aligned_cols=355 Identities=20% Similarity=0.197 Sum_probs=270.6
Q ss_pred hhccCchHHHHHHHHHHc--CCCeEEcCCccC-CCCCcHHHHHHHHHhh----cCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 11 ALETEMPIMVQIQELVRG--AKNAVSLAQGVV-YWQPPKMAMEKVKELV----WDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~--g~~~~~l~~g~~-~~~~~~~v~~a~~~~~----~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
+.....+.++.+.+.... +++.++|+.|.+ +..+++.+.+++.+++ ......+|++..|.+++|+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 87 (404)
T PTZ00376 8 VPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFG 87 (404)
T ss_pred CCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence 333333445554444432 368899999986 3555555555555543 223357899999999999999999876
Q ss_pred hcC--CCCCcEE--EecChHHHHHHHHH---HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890 84 ENK--LYKSSVM--VTAGANQAFVNIVL---TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL 155 (398)
Q Consensus 84 ~~~--~~~~~v~--~~~g~t~a~~~~~~---~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l 155 (398)
..+ +++++|+ .|.|+++++..++. +++++||+|++++|+|+.+...++..|++++.+ +.. ++++.+|++.+
T Consensus 88 ~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~l~~~~~~~~d~~~l 166 (404)
T PTZ00376 88 EASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEY-RYYDPKTKGLDFDGM 166 (404)
T ss_pred CCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeec-cccCcccCCcCHHHH
Confidence 553 4678888 48899999988875 567999999999999999999999999999999 873 34578899999
Q ss_pred HHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--cc---c--cccCCcEEEE
Q 015890 156 EKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--KH---C--CVEGDHVVNL 225 (398)
Q Consensus 156 ~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~~---~--~~~~~~~i~~ 225 (398)
++.++.. ++.+++++++||||||.+++.+++++|+++|++||+++|+||+| +.+++. .. . ....++++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i 246 (404)
T PTZ00376 167 LEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVA 246 (404)
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 9998632 22367778999999999999999999999999999999999999 665431 11 1 1123579999
Q ss_pred cccccccCCCcceeEEE---EccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCCc---hH---HHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYI---AYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDL 292 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i---~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~ 292 (398)
+|+||.|+++|+|+||+ +.+ +++++.+ .........+.+.++|.++..+++... .+ .++.++.+
T Consensus 247 ~SfSK~~~~~GlRvG~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (404)
T PTZ00376 247 QSFSKNMGLYGERIGALHIVCAN---KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRI 323 (404)
T ss_pred EeCCCcccccccccceEEEEeCC---HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 455 6655443 332222334557789999999997631 22 44556778
Q ss_pred HHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHH
Q 015890 293 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD 369 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~ 369 (398)
+++++.+.+.|++++. +.+..+++++|+|++++ .+++++|++++||.+.||. ||+++..+.++
T Consensus 324 ~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~------~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~ 389 (404)
T PTZ00376 324 QNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT------KEQVERLIEKYHIYLLDNG--------RISVAGLTSKN 389 (404)
T ss_pred HHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC------HHHHHHHHHhCCEeecCCC--------eEEEeccCHHh
Confidence 8899999999988752 34557888999999874 4788889888899999971 99998668899
Q ss_pred HHHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLEE 383 (398)
Q Consensus 370 ~~~~~~~l~~~~~~ 383 (398)
+++++++|++++..
T Consensus 390 ~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 390 VDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988753
No 72
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-43 Score=328.66 Aligned_cols=326 Identities=22% Similarity=0.322 Sum_probs=269.8
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~ 107 (398)
+.++++|+.|.|++++|+.+++++.+.+.......|++ .+..++|+.+++++ +.++ ++|++++|+++++..++.
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHHHHH
Confidence 46899999999999999999999999886544667855 67899999999998 4444 589999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|..+...++..|++++.+ +.++ ++.+|++.+++.+...+ +++|++++|+||||.+++.++++
T Consensus 100 ~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~-~~~~d~~~l~~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 100 ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGV-PLTA-DFTLDLPAMLAAIAEHR-PALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEe-cCCC-CCCCCHHHHHHHhhcCC-CCEEEEcCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999 8864 46789999999997533 59999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~ 265 (398)
+|+++| +.++|+||+| +.+..........+++++++|+|| ++++|+|+||++++ +++++.+..... .++
T Consensus 177 ~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~---~~~i~~~~~~~~--~~~ 247 (356)
T PRK04870 177 RIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH---PAWIAELDKVRP--PYN 247 (356)
T ss_pred HHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC---HHHHHHHHHccC--CCc
Confidence 999988 7799999999 443221112223468999999999 88999999999998 788888877653 456
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (398)
.+.+.|.++..+++. .+++++..+.++++++.+.+.|+.++++.+. +.+++|+|++++ +..++...+ +++||.
T Consensus 248 ~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~l-~~~gI~ 320 (356)
T PRK04870 248 VNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP----DAAAVFDGL-KTRGVL 320 (356)
T ss_pred CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC----CHHHHHHHH-HHCCEE
Confidence 788889888888875 4567788888899999999999887555554 555889999986 356677655 689999
Q ss_pred EecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 346 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 346 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
++++..|+ .++++||+++. .++.++++++|.++
T Consensus 321 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~ 355 (356)
T PRK04870 321 VKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAA 355 (356)
T ss_pred EEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHh
Confidence 99998874 36799999995 67788888887754
No 73
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.7e-43 Score=331.36 Aligned_cols=351 Identities=21% Similarity=0.229 Sum_probs=272.1
Q ss_pred ccCchHHHHHHHHHHc--CCCeEEcCCcc---CCCCCc--HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890 13 ETEMPIMVQIQELVRG--AKNAVSLAQGV---VYWQPP--KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 13 ~~~~~~~~~~~~~~~~--g~~~~~l~~g~---~~~~~~--~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~ 85 (398)
....+.+..+.+.... ..+.++|+.|. ++..+| +.+.+++.+.+.+.....|++..|.+++|+++++++.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~ 86 (396)
T PRK09257 7 AAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGAD 86 (396)
T ss_pred CCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCC
Confidence 3444455555544443 35789999996 333334 7888888887655445679999999999999999997765
Q ss_pred C--CCCCcE--EEecChHHHHHHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHh
Q 015890 86 K--LYKSSV--MVTAGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKT 158 (398)
Q Consensus 86 ~--~~~~~v--~~~~g~t~a~~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~ 158 (398)
+ +++++| ++|+|+++|+..+++++ +++||+|++++|+|+++...++..|++++.+ +. +++++.+|++.+++.
T Consensus 87 ~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~ 165 (396)
T PRK09257 87 SPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTY-PYYDAATKGLDFDAMLAD 165 (396)
T ss_pred CcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEE-eccccccCccCHHHHHHH
Confidence 4 367777 99999999999998766 4899999999999999999999999999999 76 444567899999998
Q ss_pred hccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccc-----cccCCcEEEEcccc
Q 015890 159 LETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHC-----CVEGDHVVNLFSFS 229 (398)
Q Consensus 159 l~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~-----~~~~~~~i~~~s~s 229 (398)
++.... .+++++++||||||.+++.+++++|+++|++||+++|+||+| +.++ +.... ....+++++++|+|
T Consensus 166 ~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfS 245 (396)
T PRK09257 166 LSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFS 245 (396)
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcC
Confidence 873221 256666899999999999999999999999999999999999 5543 11111 11245799999999
Q ss_pred cccCCCcceeEEEEc--cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHH
Q 015890 230 KAYGMMGWRVGYIAY--PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNRE 297 (398)
Q Consensus 230 K~~~~~G~r~G~i~~--~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~ 297 (398)
|.|+++|+|+||+++ ++ ++ ++..+.........+++.+.|.++..++... ++++++.++.++++++
T Consensus 246 K~~~~~GlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~ 323 (396)
T PRK09257 246 KNFGLYGERVGALSVVAED--AEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQ 323 (396)
T ss_pred CcCccccccceeEEEEeCC--HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988999999873 32 33 3333333333334556888899988888763 2456678888999999
Q ss_pred HHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHH
Q 015890 298 IIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374 (398)
Q Consensus 298 ~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~ 374 (398)
.+.+.|++.+ ...+..|++|+|+|++++ .+++.++++++||.+.|. + ||+++..+++++++++
T Consensus 324 ~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~ 389 (396)
T PRK09257 324 LLVEALKAKGPSRDFDFIARQRGMFSYSGLT------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVA 389 (396)
T ss_pred HHHHHHHhcCCCCCcccccccceEEEecCCC------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHH
Confidence 9999998874 246677889999999885 256677888999999873 2 9999877899999999
Q ss_pred HHHHHH
Q 015890 375 DRLRRG 380 (398)
Q Consensus 375 ~~l~~~ 380 (398)
++|+++
T Consensus 390 ~~i~~~ 395 (396)
T PRK09257 390 EAIAAV 395 (396)
T ss_pred HHHHhh
Confidence 999875
No 74
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.9e-43 Score=324.35 Aligned_cols=329 Identities=18% Similarity=0.239 Sum_probs=265.3
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+.++++|+.|.+++++|+.+++++.+.+.. ...|+ ..+..++|+.+++++ ++++++|++++|+++++..++.
T Consensus 18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~ 90 (356)
T PRK08056 18 SPDQLLDFSANINPLGMPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHH----QVPASWILAGNGETESIFAVVS 90 (356)
T ss_pred ChhhEEEeccccCCCCCCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHH
Confidence 3578999999999999999999999887754 34674 456889999999987 7889999999999999999998
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
++ .+|+ ++++.|+|..+...++..|.+++.+ +.+ ++++.+| +++.+.+.++ +++|++++|+||||.+++.+++
T Consensus 91 ~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~-~~~~~~~~~~--~k~v~l~~p~NPTG~~~~~~~~ 164 (356)
T PRK08056 91 GL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRY-SLREADGWQLT-DAILEALTPD--LDCLFLCTPNNPTGLLPERQLL 164 (356)
T ss_pred Hh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEE-ecccccCCCcc-HHHHHhccCC--CCEEEEeCCcCCCCCCCCHHHH
Confidence 87 5665 7888999999999999999999999 775 3466666 4455566544 5899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCc--cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
++|+++|+++++++|+||+| +.+++.. ......+++++++|+||.||++|+|+||+++++ +++++.+.....
T Consensus 165 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~--~~~~~~l~~~~~-- 240 (356)
T PRK08056 165 QAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD--DAAVARMRRQQM-- 240 (356)
T ss_pred HHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence 99999999999999999999 5544321 112234688999999999999999999999854 567777765433
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
.++.+.+.+.++..+++. ..+.++.++.++++++++.+.|+++++..+.++ +++|+|++++. +..++++.|+ ++
T Consensus 241 ~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~-~~ 314 (356)
T PRK08056 241 PWSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER---PDIDLQRALL-TQ 314 (356)
T ss_pred CCchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC---ChHHHHHHHH-HC
Confidence 566778888888888864 567777788899999999999988765555544 58999999874 3567888776 78
Q ss_pred CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
||.+++|..|.. +++|||+++. .++.+.++++|.+.+
T Consensus 315 gI~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 315 RILIRSCANYPGLDSRYYRVAIRS--AAENERLLAALRNVL 353 (356)
T ss_pred CeEEEECCCCCCCCCCEEEEEEcC--HHHHHHHHHHHHHHH
Confidence 999999998742 4699999985 677777777776543
No 75
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=7.9e-43 Score=348.70 Aligned_cols=344 Identities=17% Similarity=0.184 Sum_probs=276.9
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---CcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---~~v~~~~g~t~a~~~ 104 (398)
+|.++++|+.|.|++++|+.+++++.+.+.... + ..+.+++++++++++++.+|++. ++|++++|+++++..
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK 769 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence 578999999999999999999999998775421 2 23456789999999999888764 389999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCC-CCCccCCC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPG-NPSGTYIP 182 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~-nptG~~~~ 182 (398)
++.+++++||.|+++.|+|+.|...++..|++++.+ +.+ ++++.+|++.+++.++..+ .++|++++|+ ||||.+++
T Consensus 770 ll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~V-pl~~e~gf~lD~d~Le~al~~~~-~~~I~L~nPnhNPTG~v~S 847 (1082)
T PLN02672 770 LVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRI-PTKSSDGFKLTAKTLASTLETVK-KPWVYISGPTINPTGLLYS 847 (1082)
T ss_pred HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC-CCEEEEECcCCCCcCccCC
Confidence 999999999999999999999999999999999999 876 4579999999999997533 3688999997 99999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-----c----ccc----CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-----C----CVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-----~----~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
.+++++|+++|++||+++|+||+| +.|++... . ... ..++++++|+||.++++|+|+||+++++
T Consensus 848 ~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~- 926 (1082)
T PLN02672 848 NSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND- 926 (1082)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC-
Confidence 999999999999999999999999 66654321 0 000 1368999999999999999999999874
Q ss_pred cHHHHHHHHHhhccCC-CCcchHHHHHHHHHhc-CCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890 248 VEGFATQLLKVQDNIP-ICASIISQHLALYSLQ-TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322 (398)
Q Consensus 248 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 322 (398)
+++++.+........ ...+..++.++..++. ... .++.+.++.+.++++++.+.|++.+. .+..|++++|+|+
T Consensus 927 -~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi-~v~~PeGGFfLwl 1004 (1082)
T PLN02672 927 -SVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGW-DVLEPQGGISMVA 1004 (1082)
T ss_pred -HHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-eEecCCcEEEEEE
Confidence 558888876533111 1222333333333332 112 35667777899999999999998865 7888998999999
Q ss_pred eCCCC----------------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 323 RLPEK----------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 323 ~~~~~----------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+++.. ..+..+++++|+++.||.+.||+.|+.++++||+++. +++++++++++|+++..
T Consensus 1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 76310 1357789999987789999999988888999999996 88899999999998554
No 76
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-43 Score=324.39 Aligned_cols=335 Identities=23% Similarity=0.280 Sum_probs=274.0
Q ss_pred cCC-CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 28 GAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 28 ~g~-~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
.|. .+++|+.|++++++|+.+.+++.+.... ...|++. +..++|+++++++ ++++++|++++|+++++..++
T Consensus 29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~~ 101 (369)
T PRK08153 29 RGRPFRARIGANESGFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLIV 101 (369)
T ss_pred cCCcceeEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence 444 4679999999999999999999887643 4568554 5789999999987 688899999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+++++||.|+++.|+|+.+...++..|.+++.+ |.+.+ .+|++.+++.+.... ++++++++|+||||.+++.+++
T Consensus 102 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-p~~~~--~~~~~~l~~~~~~~~-~~~i~l~~P~NPtG~~~~~~~l 177 (369)
T PRK08153 102 RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTV-PYRDD--REDLDALLDAARREN-APLVYLANPDNPMGSWHPAADI 177 (369)
T ss_pred HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEe-eCCCC--CCCHHHHHHHhcccC-CcEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999998888999999998 77544 368888887775332 5899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
.+++++|+ +++++|+||+| +.+++.... ....+++++++||||.||++|+|+||++++ +++++.+..... .
T Consensus 178 ~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~---~~~~~~l~~~~~--~ 251 (369)
T PRK08153 178 VAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA---PGTIKAFDKVRN--H 251 (369)
T ss_pred HHHHHhCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC---HHHHHHHHHhhc--C
Confidence 99999887 49999999999 655442111 112468899999999999999999999998 788888877664 4
Q ss_pred CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
++.+.+.|.++..+++. .+++++..+.++++++.+.+.|++.+. .+. +.+++|+|++++.......++.++++ ++|
T Consensus 252 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~-~~G 327 (369)
T PRK08153 252 FGMNRIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARANGL-TPL-PSATNFVAIDCGRDGAFARAVLDGLI-ARD 327 (369)
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCcCcEEEEECCCCcccHHHHHHHHH-HCC
Confidence 67899999999999975 577788888899999999999988765 444 56689999998632234667777775 789
Q ss_pred eEEe-cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 344 VVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 344 i~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
|.++ |+.. ..++++|++++. .++++.++++|.+++....+
T Consensus 328 i~v~~p~~~-~~~~~iRis~~~--~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 328 IFVRMPGVA-PLDRCIRVSCGP--DEELDLFAEALPEALEAARK 368 (369)
T ss_pred eEEeeCCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHHhhc
Confidence 9995 5542 245799999994 78999999999988875443
No 77
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.6e-42 Score=320.13 Aligned_cols=325 Identities=24% Similarity=0.380 Sum_probs=268.2
Q ss_pred HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCCcEEEecChHHHH
Q 015890 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKSSVMVTAGANQAF 102 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~g~t~a~ 102 (398)
...+++.++|+.|.|..++++.+.+++.+... ...|++..|..++|++++++++++++ +++++|++|+|+++++
T Consensus 17 ~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i 93 (357)
T TIGR03539 17 ASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV 93 (357)
T ss_pred hhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence 34677899999998887778888888876542 35698888999999999999988754 6689999999999999
Q ss_pred HHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
..++..+ +++||.|+++.|+|+++...++..|++++.+ + +++.++ .++ +++|++++|+||||.++
T Consensus 94 ~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~--------~~~~l~---~~~--~~~v~~~~p~NPtG~~~ 159 (357)
T TIGR03539 94 AWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAA-D--------DPTELD---PVG--PDLIWLNSPGNPTGRVL 159 (357)
T ss_pred HHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEecc-C--------ChhhcC---ccC--ccEEEEeCCCCCcCccC
Confidence 9998888 7999999999999999999899999998876 3 222222 123 59999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-------cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+.+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~---~~~~ 236 (357)
T TIGR03539 160 SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGD---PALV 236 (357)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecC---HHHH
Confidence 9999999999999999999999999 66554322211 2357899999999999999999999988 7888
Q ss_pred HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+.+........++++.+.|.++..+|+. ..+.++.++.++++++.+.+.|++.+ ..+..+.+++|+|+.++. +..
T Consensus 237 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~~~~~~~~~---~~~ 311 (357)
T TIGR03539 237 AELLTVRKHAGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATRGE---DAW 311 (357)
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccEEEEEECCC---CHH
Confidence 8887776655677889999999999975 56677788888899999999998876 477778889999998853 456
Q ss_pred HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
++...| .++||.+.||..|+. +++|||+++. +++++++++++|
T Consensus 312 ~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 312 DTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred HHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 677766 589999999987753 5799999997 678899888876
No 78
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.1e-42 Score=327.69 Aligned_cols=356 Identities=18% Similarity=0.281 Sum_probs=269.8
Q ss_pred HHHHHHHHHcCCCeEEcCCccCCCCCc--HHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC
Q 015890 19 MVQIQELVRGAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKS 90 (398)
Q Consensus 19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~--~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~ 90 (398)
+.+..+.. ..++.++|+.|.+...++ +.+.+++.+.+... ....|++..|..++|+++++++++.+| ++++
T Consensus 20 ~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~ 98 (416)
T PRK09440 20 MDDLNDGL-RTPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ 98 (416)
T ss_pred HHHHHHHh-cCCCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh
Confidence 34443333 336789999998875332 45566666655432 235798889999999999999988765 5788
Q ss_pred cEEEecChHHHHHHHHHHhcc-----CCCEEEE-eCCCCcChhhHHHhcCc----EEEEeccCCCC--CCCCChHHHHHh
Q 015890 91 SVMVTAGANQAFVNIVLTLCD-----AGDSVVM-FAPYYFNSYMSFQMTGV----THILVGPCSSK--TLHPDADWLEKT 158 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~-----~gd~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~~~~d~e~l~~~ 158 (398)
+|++|+|+++++..++.++++ +||.|++ +.|+|++|...+...+. .+..+ +.+.+ ++.+|++.++
T Consensus 99 ~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~-- 175 (416)
T PRK09440 99 NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIE-LLPEGQFKYHVDFEHLH-- 175 (416)
T ss_pred hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccc-cccccccccCCCHHHcc--
Confidence 999999999999999999985 5899999 69999999876654442 11222 33332 3568988887
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc---ccccCCcEEEEcccccccCC
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH---CCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~---~~~~~~~~i~~~s~sK~~~~ 234 (398)
+..+ ++++++++|+||||.+++.+++++|+++|+++|+++|+||+| ..+..... .....+++++++|+||. ++
T Consensus 176 ~~~~--~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~ 252 (416)
T PRK09440 176 IDED--TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GL 252 (416)
T ss_pred cCCC--ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CC
Confidence 3333 599999999999999999999999999999999999999999 22211111 11124689999999996 88
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHHHHHHHHhccC-CC--
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSPL-GE-- 308 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~l~~~-~~-- 308 (398)
||+|+||++++ +++++.+.........+++.+.|.++..+++.+. .+..+ .++.++++++.+.+.|.+. +.
T Consensus 253 pGlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~ 329 (416)
T PRK09440 253 PGVRCGIVIAD---EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP 329 (416)
T ss_pred CcceEEEEeCC---HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999998 8899998887766667889999999999998643 22333 4555677777777777653 21
Q ss_pred CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+..|++++|+|++++....+..++...+ .++||.+.||+.|+. .+++||+++. +.+++++++++|.+
T Consensus 330 ~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~ 407 (416)
T PRK09440 330 CLIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAE 407 (416)
T ss_pred eEEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHH
Confidence 355678889999999986323567788766 589999999988742 2589999986 78999999999999
Q ss_pred HHHHHhc
Q 015890 380 GLEELVK 386 (398)
Q Consensus 380 ~~~~~~~ 386 (398)
++++..+
T Consensus 408 ~~~~~~~ 414 (416)
T PRK09440 408 EVEKAYA 414 (416)
T ss_pred HHHHHhh
Confidence 9887554
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-42 Score=323.59 Aligned_cols=328 Identities=23% Similarity=0.323 Sum_probs=268.4
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+.++++|+.|.|++.+++.+.+++.+.... ...|++..| .++|+.+++++ ++++++|++|+|+++++..++.
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAVICR 106 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence 4568999999999998899999998875433 567877666 48999999987 6788999999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|+.+...++..|.+++.+ +.+.+ +.+|++++++.+++++ +++++++|+||||.+++.++++
T Consensus 107 ~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~ 182 (371)
T PRK05166 107 AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERV-TVTPD-LGFDLDALCAAVARAP--RMLMFSNPSNPVGSWLTADQLA 182 (371)
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999998 77643 4689999999998765 8999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCcccc-----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~ 260 (398)
+|+++|++ ++++|+||+| +.+++..... ...+++++++|+||.||++|+|+||+++++ +++++.+.....
T Consensus 183 ~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~--~~l~~~~~~~~~ 259 (371)
T PRK05166 183 RVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD--PELVGLLDRVRT 259 (371)
T ss_pred HHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC--HHHHHHHHHhcc
Confidence 99999874 8899999999 5543321111 123578999999999999999999987643 778888776553
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 340 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 340 (398)
.++.+.+.|.++..++.. .+++++..+.+.++++.+.+.|++.+. .+. +.+++|+|++++. +..++++.++
T Consensus 260 --~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-p~~g~fl~~~~~~---~~~~l~~~l~- 330 (371)
T PRK05166 260 --PFNVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGY-RIA-PSRANFLFFDARR---PASAVAEALL- 330 (371)
T ss_pred --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-eeC-CCcCCEEEEeCCC---CHHHHHHHHH-
Confidence 466788899888888875 577888888899999999999998864 554 4558999999763 4678888886
Q ss_pred hcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 341 RHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 341 ~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
++||.++||..++.+++|||+++. .++.+++.+.|+..
T Consensus 331 ~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i 368 (371)
T PRK05166 331 RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKV 368 (371)
T ss_pred HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHH
Confidence 689999999877678999999996 45555555555543
No 80
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=2.3e-43 Score=329.23 Aligned_cols=338 Identities=29% Similarity=0.479 Sum_probs=281.5
Q ss_pred CeEEcCCccCCCC----CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC-cEEEecChHHHH
Q 015890 31 NAVSLAQGVVYWQ----PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAF 102 (398)
Q Consensus 31 ~~~~l~~g~~~~~----~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~g~t~a~ 102 (398)
+.|+|+.|++... ++++.++++.+ .........|++..|.+++|+++++++.+..+ .+++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999998886 66777777665 33333478899999999999999999986554 4577 899999999999
Q ss_pred HHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccC---C-CCeEEEEeCCCCC
Q 015890 103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK---P-TPKLVSVVNPGNP 176 (398)
Q Consensus 103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~---~-~~~~v~i~~p~np 176 (398)
..++..+ .++||+|+++.|+|+.+...++..|.+++.+ +.+ +.++.+|++.|++.+++. . ++++|++++|+||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP 160 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPV-PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP 160 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEE-EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeec-cccccccccccccccccccccccccccccceeeecccccc
Confidence 9999999 7899999999999999999999999999988 654 345788999999999862 1 2589999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-----cccccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-----~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
||.+++.+++++|+++|+++|+++|+||+| +.+.... .......+++++.|+||.||++|+|+||++++ +
T Consensus 161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~---~ 237 (363)
T PF00155_consen 161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP---P 237 (363)
T ss_dssp TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE---H
T ss_pred cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch---h
Confidence 999999999999999999999999999999 5554321 22223456899999999999999999999998 8
Q ss_pred HHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890 250 GFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326 (398)
Q Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (398)
++++.+......... +.+.+.++..++.... .++++.++.++++++.+.+.|++.+. .+..+++++|+|+.++.
T Consensus 238 ~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~ 314 (363)
T PF00155_consen 238 ELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGI-TVLPPEAGFFLWVRLDP 314 (363)
T ss_dssp HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-EEEHHSBSSEEEEEESH
T ss_pred hhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhh-heeeccCccEEEEEccc
Confidence 899998877764333 8888888888887622 27888999999999999999988854 77777789999999875
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
. +..+++++|+++.||.+.||..|+.+++||++++..+++++++++++|
T Consensus 315 ~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 N--DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp H--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred c--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 3 567899999866699999999998899999999547899999999876
No 81
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-42 Score=317.18 Aligned_cols=325 Identities=24% Similarity=0.344 Sum_probs=261.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
...++|+.|.+++++|+.+++++.+.+.......|+ ..+..++|+++++++ ++++++|++++|+++++..++.++
T Consensus 22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHHHHh
Confidence 457999999999999999999999877654456785 445688999999987 678899999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+++||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.++... +++|++++|+||||.+++.+++
T Consensus 97 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~-~k~v~l~~p~NPtG~~~~~~~l--- 170 (351)
T PRK14807 97 INKGDVVIYPHPSFAMYSVYSKIAGAVEIPV-KLKED-YTYDVGSFIKVIEKYQ-PKLVFLCNPNNPTGSVIEREDI--- 170 (351)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHHhhccC-CCEEEEeCCCCCCCCCCCHHHH---
Confidence 9999999999999999988889999999999 77643 5789999999997532 5999999999999999995555
Q ss_pred HHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890 190 SDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 267 (398)
.++|++++.++|+||+|..+.+... .....+++++++|+||.+|++|+|+||++++ +++++.+..... .++.+
T Consensus 171 ~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~---~~~~~~~~~~~~--~~~~~ 245 (351)
T PRK14807 171 IKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN---ENILKYLNLVKS--PYNIN 245 (351)
T ss_pred HHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecC---HHHHHHHHHccC--CCCcC
Confidence 5555566788999999922222211 1223578999999999999999999999998 889888876654 45678
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (398)
.+.|.++..+++. .++.+..+.+.++++.+.+.|++.+++.+. +.+++|+|++++ +..++++.|+ ++||.++
T Consensus 246 ~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~----~~~~~~~~l~-~~gV~v~ 317 (351)
T PRK14807 246 SLSQVIALKVLRT--GVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK----DADYVYQGLL-ERGILVR 317 (351)
T ss_pred HHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC----CHHHHHHHHH-HCCEEEE
Confidence 8999999999874 456777778888888899999876555655 445889999986 3566777665 7899998
Q ss_pred cCCC-CCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 348 PGGA-CGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 348 ~g~~-~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
++.. ++.++++||+++. .++.+++++.|+++
T Consensus 318 ~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~ 349 (351)
T PRK14807 318 DFSKVEGLEGALRITVSS--CEANDYLINGLKEL 349 (351)
T ss_pred ECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHh
Confidence 8653 3457899999995 56677777777654
No 82
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=321.95 Aligned_cols=327 Identities=20% Similarity=0.285 Sum_probs=267.3
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+.++++|+.|.+++++++.+.+++.+.+.+. ...|+ ..+..++|+++++++ ++++++|++|+|+++++..++++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~~y~-~~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNENPYPPSPKVLEAIRAALGDD-LRLYP-DPNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHhhhh-hhcCC-CCcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHH
Confidence 3679999999999988999999998876643 45684 446689999999998 67899999999999999999999
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++++||+|+++.|+|+.+...++..|++++.+ +.++ ++.+|++.+++ . .+++++++||||||.+++.+++++
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~----~--~~~v~~~~P~NPtG~~~~~~~~~~ 168 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEI-PLDD-DFSIDVEDYLR----P--NGGIIFPNPNAPTGIALPLAEIER 168 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEe-ecCC-CCCCCHHHHHh----c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999998899999999998 7764 35789988863 2 378899999999999999888888
Q ss_pred HHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CCC
Q 015890 189 ISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PIC 265 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~ 265 (398)
|+++++ ++++|+||+|..+.+... .....+++++++|+||.||++|+|+||++++ +++++.+....... .++
T Consensus 169 l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~---~~~~~~l~~~~~~~~~~~ 243 (353)
T PRK05387 169 ILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH---PELIEALNRVKNSFNSYP 243 (353)
T ss_pred HHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC---HHHHHHHHHhhccCCCCC
Confidence 887643 899999999933333221 1223567899999999999999999999998 78888887776432 467
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (398)
.+.+.|.++..++.. .+++++.++.+.++++.+.+.|++.+. .+. +.+++|+|+.++. .+..++++.|. ++||.
T Consensus 244 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~ 317 (353)
T PRK05387 244 LDRLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEALGF-EVL-PSKANFVFARHPS--HDAAELAAKLR-ERGII 317 (353)
T ss_pred cCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eEC-CCcCcEEEEECCC--CCHHHHHHHHH-HCCEE
Confidence 889999999888875 567788888899999999999988864 554 4558899999873 35778888775 88999
Q ss_pred EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 346 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+++......++++|++++. .+++++++++|.+++.
T Consensus 318 v~~~~~~~~~~~iRis~~~--~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 318 VRHFNKPRIDQFLRITIGT--DEEMEALVDALKEILA 352 (353)
T ss_pred EEECCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 9865433346799999984 6889999999987653
No 83
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.7e-42 Score=320.45 Aligned_cols=330 Identities=23% Similarity=0.332 Sum_probs=273.3
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
++.++++|+.|.++++++|.+++++.+.... ...|++. ...++|+.+++++ ++++++|++|+|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence 6788999999999998899999999887754 4678544 3478999999987 6778899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|..+...++..|.+++.+ +.+ ++.+|++.+++.++++ +++|++++|+||||.+++.+++.
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~l~~~~~~~--~~~v~l~~p~nptG~~~~~~~l~ 177 (367)
T PRK02731 103 AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEV-PAK--DYGHDLDAMLAAVTPR--TRLVFIANPNNPTGTYLPAEEVE 177 (367)
T ss_pred HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEe-ccc--CCCCCHHHHHHHhCCC--CcEEEEeCCCCCCCcCCCHHHHH
Confidence 999999999999999988888888999999988 763 3567999999999865 49999999999999999988888
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
++++.|+ +|+++|+||+| +.+.+.... ....+++++++|+||.||++|+|+||++++ +++++.+.....
T Consensus 178 ~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~---~~~~~~l~~~~~- 252 (367)
T PRK02731 178 RFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP---PEIIDALNRVRQ- 252 (367)
T ss_pred HHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC---HHHHHHHHHccC-
Confidence 8888775 59999999999 444332111 112467899999999999999999999999 788888877654
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+++.+.+.|.++..+++. ..++++..+.++++++.+.+.|++.+. .+. +.+++|+|+.++.. .+..++++.|. +
T Consensus 253 -~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~g~~~~i~~~~~-~~~~~~~~~L~-~ 326 (367)
T PRK02731 253 -PFNVNSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAELGL-EYI-PSVGNFILVDFDDG-KDAAEAYQALL-K 326 (367)
T ss_pred -CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCCceEEEEECCCC-CCHHHHHHHHH-H
Confidence 456788999999999975 567788888888999999999988754 555 44589999999543 36778888775 7
Q ss_pred cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+||.++++..|+.+++||++++. .+++++++++|+++++
T Consensus 327 ~gI~v~~~~~~~~~~~iRis~~~--~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 327 RGVIVRPVAGYGLPNALRITIGT--EEENRRFLAALKEFLA 365 (367)
T ss_pred CCEEEEeCCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHh
Confidence 89999999888667899999984 7888999998888764
No 84
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=6.8e-42 Score=317.90 Aligned_cols=309 Identities=17% Similarity=0.202 Sum_probs=249.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.+++++|+.+.+++.+.+.. ...|++. +..++|+++++++ ++++++|++|+|+++++..++.++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHHh
Confidence 46899999999999999999999887654 5678654 4678999999998 688999999999999999999887
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCC-C---CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-L---HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
. +||+|+++.|+|..+...++..|++++.+ +.+.++ + ..+++.+++... . ++++++++||||||.+++.+
T Consensus 95 ~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~l~nP~NPTG~~~~~~- 168 (360)
T PRK07392 95 A-QLRAVYLITPAFGDYRRALRAFGATVKEL-PLPLDQPSPGLTLRLQTLPPQLT-P--NDGLLLNNPHNPTGKLWSRE- 168 (360)
T ss_pred C-CCCeEEEECCCcHHHHHHHHHcCCeEEEE-ecccccCCcccccCHHHHHHhcc-C--CCEEEEeCCCCCCCCCcCHH-
Confidence 5 67899999999999999999999999999 876543 2 245666655432 2 58999999999999999955
Q ss_pred HHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890 186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
+|.++++++++ +|+||+| |.+++.... ....+++++++|+||.||++|+|+||++++ +++++.+....
T Consensus 169 --~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~---~~~~~~~~~~~ 242 (360)
T PRK07392 169 --AILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH---PDRLQRWQQWR 242 (360)
T ss_pred --HHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC---HHHHHHHHhhC
Confidence 45556667775 6779999 655442221 123468999999999999999999999998 78888876655
Q ss_pred ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890 260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 339 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 339 (398)
. .++.+.+.|.++..+++. ..+.++..+.++++++.+.+.|+.++++.+.. .+++|+|++++. +..++..+++
T Consensus 243 ~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~---~~~~l~~~ll 315 (360)
T PRK07392 243 D--PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG---SALQLQEKLL 315 (360)
T ss_pred C--CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC---CHHHHHHHHH
Confidence 3 567899999999999985 45666666778888999999998876655554 568999999864 5678888877
Q ss_pred HhcCeEEecCCCCCC--CCeEEEEecC
Q 015890 340 HRHGVVVIPGGACGC--RGHLRISFGG 364 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~--~~~iRi~~~~ 364 (398)
+++||.+.||..|+. ++++||+++.
T Consensus 316 ~~~gv~v~pg~~f~~~~~~~iRi~~~~ 342 (360)
T PRK07392 316 QQHRILIRDCLSFPELGDRYFRVAVRT 342 (360)
T ss_pred hhCCEEEEeCCCCCCCCCCEEEEEeCC
Confidence 788999999998863 5799999997
No 85
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=4.5e-42 Score=319.04 Aligned_cols=322 Identities=21% Similarity=0.266 Sum_probs=261.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
++.++|+.|.+++++||.+++++.+.+.. ...|++. +..++|+.+++++ ++++++|++|+|+++++..++.++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHHHHHH
Confidence 46899999999999999999999887654 3457544 4788999998876 788999999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+++||+|++++|+|+.+...++..|++++.+ +.++ ++.+|++.+++. .++ ++++++++||||||.+++.++++++
T Consensus 116 ~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~-~~~--~~~v~l~nP~NPTG~~~~~~~l~~l 190 (370)
T PRK09105 116 TSPTAGLVTADPTYEAGWRAADAQGAPVAKV-PLRA-DGAHDVKAMLAA-DPN--AGLIYICNPNNPTGTVTPRADIEWL 190 (370)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHhc-CCC--CCEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999999999999999998 7764 457899999876 333 4899999999999999999999999
Q ss_pred HHHHHHcCCEEEEeeceeccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890 190 SDLCKAAGSWLVVDNTYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 266 (398)
++.++ +++++|+||+|..+...+.. ....+++++++|+||.||++|+|+||++++ +++++.+... . .+..
T Consensus 191 ~~~~~-~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~---~~~i~~l~~~-~--~~~~ 263 (370)
T PRK09105 191 LANKP-AGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR---PDLLAKLARF-G--HNPL 263 (370)
T ss_pred HHhCC-CCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC---HHHHHHHHhc-C--CCCc
Confidence 98764 58999999999323222111 113568999999999999999999999998 7888888765 2 4557
Q ss_pred chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
+.+.+.++..++.. .+++++..+.+.++++.+.+.|++.+. .+..+. ++|++++++ .+..++++.|+ ++||.+
T Consensus 264 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~~f~~~~~~---~~~~~l~~~L~-~~gI~v 336 (370)
T PRK09105 264 PVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQ-ANCFMVDVK---RPAKAVADAMA-KQGVFI 336 (370)
T ss_pred CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCC-CcEEEEeCC---CCHHHHHHHHH-HCCcEE
Confidence 88888888888875 578888888999999999999998764 666666 555567775 25678888887 679999
Q ss_pred ecCCCCC-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 347 IPGGACG-CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 347 ~~g~~~~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
.. .|. .++++|++++. ++++++++++|.+.+
T Consensus 337 ~~--~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~ 368 (370)
T PRK09105 337 GR--SWPIWPNWVRVTVGS--EEEMAAFRSAFAKVM 368 (370)
T ss_pred ec--CCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 33 343 46899999994 677777777777654
No 86
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=317.53 Aligned_cols=329 Identities=24% Similarity=0.324 Sum_probs=266.2
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~ 106 (398)
..++|+.|.|++++|+.+.+++.+.+.. .....| +..+..++|+++++++++.++ +++++|++|+|+++++..++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~ 105 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL 105 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence 5799999999999999999999988653 235678 456889999999999988764 57899999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ +++.+|++.+++.++..+ ++++++++|+||||.+++.+++
T Consensus 106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~-~~~i~l~~p~NPtG~~~~~~~l 182 (368)
T PRK03317 106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEG-PRA-ADFTLDVDAAVAAIAEHR-PDVVFLTSPNNPTGTALPLDDV 182 (368)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEc-ccC-CCCCCCHHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999999998888 654 346789999999997433 5899999999999999997777
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
++|+++| ++++|+||+| +.+.+..... ...+++++++|+||.||++|+|+||++++ +++++.+.....
T Consensus 183 ~~l~~~~---~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~---~~~~~~l~~~~~- 255 (368)
T PRK03317 183 EAILDAA---PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA---PAVVDALRLVRL- 255 (368)
T ss_pred HHHHHHC---CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC---HHHHHHHHhcCC-
Confidence 7776655 7999999999 6554432211 12357899999999999999999999998 889888876653
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+++.+.+.+.++..+++. .+...+..+.+.++++.+.+.|++.+. .+..+.+++++|..++ +..++...++ +
T Consensus 256 -~~~~s~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~----~~~~~~~~l~-~ 327 (368)
T PRK03317 256 -PYHLSAVTQAAARAALRH-ADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA----DRHAVWQGLL-D 327 (368)
T ss_pred -CCCCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC----CHHHHHHHHH-H
Confidence 567889999999999975 344455666778888889999988764 6666776666665553 4567777665 7
Q ss_pred cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+||.+++. +.++++||+++. .+++++++++|.+++..
T Consensus 328 ~Gv~v~~~---~~~~~iRi~~~~--~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 328 RGVLIRDV---GIPGWLRVTIGT--PEENDAFLAALAEVLAT 364 (368)
T ss_pred CCEEEEeC---CCCCeEEEecCC--HHHHHHHHHHHHHHHHH
Confidence 89999874 346899999984 67888888888877643
No 87
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-42 Score=319.67 Aligned_cols=317 Identities=23% Similarity=0.316 Sum_probs=257.0
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
...++|+.|.+++++++.+. ......| |.....++++.+++++ |+++++|++|+|+++++..++.++
T Consensus 28 ~~~~~l~~Nenp~~~~~~~~--------~~~~~~Y-p~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 28 NGDVWLNANEYPTAVEFQLT--------QQTLNRY-PECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CCceEecCCCCCCCCChhhc--------ccccccC-CCCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHHh
Confidence 45699999999998887531 1124567 5555567777777765 789999999999999999999999
Q ss_pred ccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 ~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+++| |+|+++.|+|..|...++..|++++.+ +.++ ++.+|++.+++.++ + +++|++++||||||.+++.+++++
T Consensus 95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v-~~~~-~~~~d~~~l~~~~~-~--~~lv~l~nPnNPTG~~~~~~~l~~ 169 (351)
T PRK01688 95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTV-PTLD-NWQLDLPAIADNLD-G--VKVVYVCSPNNPTGNLINPQDLRT 169 (351)
T ss_pred cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEe-ecCC-CCCCCHHHHHHhcc-C--CcEEEEeCCCCCCCCCCCHHHHHH
Confidence 9887 899999999999999999999999999 7765 47889999999873 3 599999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeeceeccCCCcc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890 189 ISDLCKAAGSWLVVDNTYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~~~~~~~~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~ 265 (398)
|++.|++ +.++|+||+|..+..... .....+++++++|+||.||++|+|+||++++ +++++.+.+... +++
T Consensus 170 l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~---~~~i~~l~~~~~--~~~ 243 (351)
T PRK01688 170 LLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN---EEVINLLLKVIA--PYP 243 (351)
T ss_pred HHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC---HHHHHHHHhccC--CCC
Confidence 9999876 689999999933322111 1123578999999999999999999999998 889988887654 566
Q ss_pred cchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 266 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
.+.+.+.++.++|+.. .+++++..+.+.++++++.+.|++++++....+.+++|+|++++ +..++.+.|+ ++||
T Consensus 244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----~~~~l~~~L~-~~gi 318 (351)
T PRK01688 244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----ASSAVFKSLW-DQGI 318 (351)
T ss_pred CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HCCe
Confidence 7788888888888752 35778888888889999999999886654344556999999886 3677888776 8899
Q ss_pred EEecCCCC-CCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 345 VVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 345 ~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
.++++..+ +.++++||+++. .+++++++++|
T Consensus 319 ~vr~~~~~~~~~~~iRis~~~--~~e~~~l~~al 350 (351)
T PRK01688 319 ILRDQNKQPGLSNCLRITIGT--REECQRVIDAL 350 (351)
T ss_pred EEEECCCcCCCCCeEEEeCCC--HHHHHHHHHhh
Confidence 99987654 557899999994 68888888776
No 88
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.3e-41 Score=317.26 Aligned_cols=313 Identities=19% Similarity=0.331 Sum_probs=250.0
Q ss_pred HhHHhhccCch----HHHHHHHHHHcCCCeEEcCCccCC--------C----------------------CCcHHHHHHH
Q 015890 7 LAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVY--------W----------------------QPPKMAMEKV 52 (398)
Q Consensus 7 ~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~g~~~--------~----------------------~~~~~v~~a~ 52 (398)
+++|+.....+ ...+..++.++|.++++|+.|.|+ + .+++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~ 90 (407)
T PLN02368 11 LNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK 90 (407)
T ss_pred cCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence 45555533322 233445556678999999999986 2 1344444444
Q ss_pred HHhhc--CCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChh
Q 015890 53 KELVW--DPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSY 127 (398)
Q Consensus 53 ~~~~~--~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~ 127 (398)
..+. ......|++..|..++|+++++++.+.+| +++++|++|+|+++++..++.+++ ++||+|+++.|+|+.+.
T Consensus 91 -~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~ 169 (407)
T PLN02368 91 -HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS 169 (407)
T ss_pred -HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence 4432 23367899899999999999999988776 568899999999999999999987 79999999999999999
Q ss_pred hHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 128 MSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
..++..|.+++.+ +.++ ++|.+|++.+++.+++. .+++++++++|+||||.+++.+++++|+++|++||+++|+
T Consensus 170 ~~~~~~g~~~v~v-~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 170 ATISLLGGTLVPY-YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999999999 7764 46889999999998731 1359999999999999999999999999999999999999
Q ss_pred eece--eccCCC-cc-cc------c-----cCCcEEEEccccccc-CCCcceeEEEEc---cCCcHHHHHHHHHhhccCC
Q 015890 203 DNTY--FMYDGR-KH-CC------V-----EGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 203 De~~--~~~~~~-~~-~~------~-----~~~~~i~~~s~sK~~-~~~G~r~G~i~~---~~~~~~~~~~l~~~~~~~~ 263 (398)
||+| +.|++. +. +. . ..+++++++|+||.| |++|+|+||+++ + +++++.+..... ..
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~---~~li~~~~~~~~-~~ 324 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP---PKTVEEIYKVAS-IA 324 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC---HHHHHHHHHHhc-cc
Confidence 9999 777553 21 11 0 134799999999998 899999999984 5 788888887643 46
Q ss_pred CCcchHHHHHHHHHhcCCc-------hHH---HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890 264 ICASIISQHLALYSLQTGP-------EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 325 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~-------~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 325 (398)
++.+.++|.++.+++.... .+. +++.+.++++++.+.+.|++++++.+..|+|++|+|++++
T Consensus 325 ~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 325 LSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred CCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 7789999999999997421 233 3457888999999999999987777888999999998765
No 89
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.1e-41 Score=315.44 Aligned_cols=323 Identities=22% Similarity=0.355 Sum_probs=266.8
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.+++++||.+++++.++... ...|++..+ .++|+.+++++ ++++++|++++|+++++..++.++
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHHHHHh
Confidence 57999999999999999999999987643 456755544 88999999998 577889999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+++||+|+++.|+|+.+...++..|.+++.+ +.+++ +.+|++.+++.+++++ ++|++++|+||||.+++.+++.++
T Consensus 92 ~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 92 LEPGDAVLVPPPTYSMYEISAKIHGAEVVKV-PLDED-GQLDLEDILVAIDDKP--KLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999999999999988888889999999999 87665 5689999999886654 999999999999999998888888
Q ss_pred HHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890 190 SDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 266 (398)
++.|+ +|+++|+|++| +...+... .....+++++++|+||++|++|+|+||++++ +++++.+..... .++.
T Consensus 168 ~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~~~~ 241 (346)
T TIGR01141 168 LERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN---AEIIDALNKVRA--PFNL 241 (346)
T ss_pred HHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC---HHHHHHHHhccC--CCCC
Confidence 88776 69999999999 44322111 1112356889999999999899999999998 788888876654 4667
Q ss_pred chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
+.++|.++..+++. ..++.+..+.++++++++.+.|++++++.+. +.+++|+|+.++. +..++.+.|. ++||.+
T Consensus 242 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~---~~~~~~~~L~-~~gI~v 315 (346)
T TIGR01141 242 SRLAQAAAIAALRD-DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR---DADALFEALL-EKGIIV 315 (346)
T ss_pred CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC---CHHHHHHHHH-HCCeEE
Confidence 88899998888875 3467888888999999999999887555654 4458899999874 5678888775 789999
Q ss_pred ecCCCCCC-CCeEEEEecCCCHHHHHHHHHHH
Q 015890 347 IPGGACGC-RGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 347 ~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
.+|..|+. ++++|++++ ++++++++++.|
T Consensus 316 ~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l 345 (346)
T TIGR01141 316 RDLNSYPGLPNCLRITVG--TREENDRFLAAL 345 (346)
T ss_pred EeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence 99987743 789999988 578888888776
No 90
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.6e-41 Score=312.11 Aligned_cols=324 Identities=21% Similarity=0.346 Sum_probs=262.4
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE-ecChHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV-TAGANQAFVNIV 106 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~-~~g~t~a~~~~~ 106 (398)
+++++++|+.|.++++++|.+++++.+.+.. ...|++. ...++|+.+++++ ++++++|++ ++|+++++..++
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~~~ 104 (361)
T PRK00950 32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDTLM 104 (361)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHHHH
Confidence 4568999999999999999999999887654 4567544 4488999999987 678889999 789999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+++++||+|+++.|+|..+...++..|++++.+ +.+ +++.+|++.+++.++.+ ++++++++|+||||.+++ .
T Consensus 105 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~-~~~~~~~~~l~~~~~~~--~~~v~~~~p~nptG~~~~---~ 177 (361)
T PRK00950 105 RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYA-KRE-EDFSLDVDSVLNAITEK--TKVIFLCTPNNPTGNLIP---E 177 (361)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecC-CCCCcCHHHHHHHhccC--CCEEEEeCCCCCCCCCcC---H
Confidence 9999999999999999999988899999999988 654 34578999999998765 489999999999999999 5
Q ss_pred HHHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 187 KRISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+++.++|+++|+++|+||+|..+.+... .....+++++++|+||.+|++|+|+||++++ +++++.+..... .+
T Consensus 178 ~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~--~~ 252 (361)
T PRK00950 178 EDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP---EWLIDYYMRAKT--PF 252 (361)
T ss_pred HHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC---HHHHHHHHHhcC--CC
Confidence 5666667788999999999922222111 1123467899999999999999999999998 788888877654 45
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
+.+.+.+.++..+++. .+++++..+.++++++.+.+.|+ ..+. +.+++|+|++++. .+..+++++|. ++||
T Consensus 253 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~--~~~~~~~~~l~-~~gv 323 (361)
T PRK00950 253 SLTRLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTP--MTAKEFCEELL-KRGV 323 (361)
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCC--CCHHHHHHHHH-HCCE
Confidence 6788899888888875 56777778888888888888876 2343 4568999999942 36788888886 7899
Q ss_pred EEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 345 VVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 345 ~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
.+++|..|.. ++++|++++. .+++++++++|++++
T Consensus 324 ~v~~~~~f~~~~~~~lRis~~~--~~~~~~l~~~L~~il 360 (361)
T PRK00950 324 IVRDCTSFRGLGDYYIRVSIGT--FEENERFLEILKEIV 360 (361)
T ss_pred EEeeCCccCCCCCCeEEEECCC--HHHHHHHHHHHHHHh
Confidence 9999887743 5799999994 678999999988764
No 91
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=307.13 Aligned_cols=320 Identities=18% Similarity=0.245 Sum_probs=256.8
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.++++++|+.|.+++++|+.+++++.+.+.. ...|++..|..++|+++++++ ++++++|++|+|+++++..++.
T Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCCeEEecCCCCCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHh
Confidence 3578999999999999999999999988764 467977789999999999997 6789999999999999999888
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++ +.++++.|+|..+...++..|++++.+ +.+++ +.+|++.+ +++ ++++++++|+||||.+++.+
T Consensus 94 --l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v-~~~~~-~~~d~~~l----~~~--~~~i~l~np~NPTG~~~~~~--- 159 (349)
T PRK07908 94 --LRP-RRAAVVHPSFTEPEAALRAAGIPVHRV-VLDPP-FRLDPAAV----PDD--ADLVVIGNPTNPTSVLHPAE--- 159 (349)
T ss_pred --cCC-CeEEEeCCCChHHHHHHHHcCCEEEee-ccCcc-cCcChhHh----ccC--CCEEEEcCCCCCCCCCcCHH---
Confidence 456 567889999999999999999999999 88754 66787754 333 58999999999999999955
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
+|.++|+ ++.++|+||+| +.. +..... ...+++++++|+||.||++|+|+||++++ +++++.+..... .
T Consensus 160 ~l~~l~~-~~~~iIvDe~y~~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~---~~~~~~~~~~~~--~ 232 (349)
T PRK07908 160 QLLALRR-PGRILVVDEAFADAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA---PDVLARLTRGRA--H 232 (349)
T ss_pred HHHHHHh-cCCEEEEECcchhhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecC---HHHHHHHHhcCC--C
Confidence 4555665 47899999999 432 322111 23467899999999999999999999998 788888876654 3
Q ss_pred CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 264 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
++.+.+.+.++..++.. ...++++.++.+.++++.+.+.|++++ +.+..+.+++|+|++++. ..++... ++++
T Consensus 233 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~----~~~~~~~-l~~~ 306 (349)
T PRK07908 233 WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD----AELLRKR-LRER 306 (349)
T ss_pred CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc----HHHHHHH-HHhC
Confidence 55667777777777763 236778888889999999999998874 477777789999999873 3455554 4689
Q ss_pred CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
||.+++|..|. .+++|||+++. .+++++++++|++.+.
T Consensus 307 gI~v~~g~~f~~~~~~~vRis~~~--~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 307 GIAVRRGDTFPGLDPDYLRLAVRP--RAEVPVLVQALAEILK 346 (349)
T ss_pred CEEEEECCCCCCCCCCeEEEEeCC--CccHHHHHHHHHHHHh
Confidence 99999999884 36899999974 6777888888776543
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-41 Score=310.15 Aligned_cols=321 Identities=23% Similarity=0.283 Sum_probs=256.2
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
..++++.+.+++++++.... ....|+ +....++|+++++++ ++++++|++++|+++++..++.+++
T Consensus 32 ~~~~~~~ne~~~~~~~~~~~---------~~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~~~ 97 (364)
T PRK04781 32 GDVWLNANESAWANPADPDA---------STRRYP-DPQPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLVRALC 97 (364)
T ss_pred CCEEeeCCCCCCCCChhhcc---------hhccCC-CCCHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHHHHhc
Confidence 46889999998887763111 145674 445689999999987 6888999999999999999999999
Q ss_pred cCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 111 DAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 111 ~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+| |.|+++.|+|..+...++..|.+++.+ +.+ .+++.+|++.+.+.+ +++ +++|++++|+||||.+++.+++
T Consensus 98 ~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~lv~l~~p~NPTG~~~~~~~~ 174 (364)
T PRK04781 98 VPGRDAVLVTPPVFGMYAVCARLQNAPLVEV-PLVDGADGFHADVPAIVAAALASN--AKLVFLCSPSNPAGSAIALDQI 174 (364)
T ss_pred CCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCCccCCCcCHHHHHHHHhccC--CeEEEEcCCCCCCCCCcCHHHH
Confidence 888 799999999988888889999999999 764 346778998886655 343 5999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
++++++|+ +++++|+||+| |.+.... ......+++++++||||.||++|+|+||++++ +++++.+.+... .
T Consensus 175 ~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~---~~l~~~l~~~~~--~ 248 (364)
T PRK04781 175 ERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN---AELIAVLRRCQA--P 248 (364)
T ss_pred HHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC---HHHHHHHHhccC--C
Confidence 99999886 47999999999 5432211 11223578999999999999999999999999 899999887765 5
Q ss_pred CCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 264 ICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
++.+.+.+.++..+|+.+. ++..+..+.+.++++.+.+.|+++++.....+.+++|+|++++ +..++.+.+ .++
T Consensus 249 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----~~~~~~~~l-~~~ 323 (364)
T PRK04781 249 YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----DAEAAFQAL-LAA 323 (364)
T ss_pred CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHH-HHC
Confidence 6778888888888887643 4566666778888999999998886543334666999999986 356677766 589
Q ss_pred CeEEecCCCC-CCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 343 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
||.++++..| +.++++||+++. .++.++++++|++..
T Consensus 324 gI~v~~~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~ 361 (364)
T PRK04781 324 GVVVRDQRAAPRLSDALRITLGT--PEQNDRVLAALQRTQ 361 (364)
T ss_pred CeEEeeCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence 9999999765 346899999996 677778877776543
No 93
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=305.20 Aligned_cols=315 Identities=22% Similarity=0.355 Sum_probs=251.8
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
++.+.++|+.|++++++|+.+++++.+.+.......| +..+..++|+++++++++.+ +++++|++|+|+++++..++.
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~~-~~~~~i~it~Ga~~~i~~~~~ 94 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTDF-LSKNNVSVGNGADEIIYVMML 94 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCCC-CCcceEEEcCCHHHHHHHHHH
Confidence 5679999999999999999999999887765434446 44589999999999997653 789999999999999999998
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
++ |+|+++.|+|+.+...++..|++++.+ +.+++ +.++.+. +. . .+++++++||||||.+++.++++
T Consensus 95 ~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~----~~-~--~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 95 MF----DRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVN----VG-E--GDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred Hh----CcEEECCCCHHHHHHHHHHcCCeEEEe-cCCCc-CCCChhH----cc-C--CCEEEEeCCCCCCCCCcCHHHHH
Confidence 88 679999999999999999999999999 87654 3344222 22 2 48999999999999999988777
Q ss_pred HHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890 188 RISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~ 265 (398)
+|+ ++++++|+||+|..+.+... .....+++++++|+||.+|++|+|+||++++ +++++.+..... .++
T Consensus 162 ~l~----~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~---~~~~~~l~~~~~--~~~ 232 (335)
T PRK14808 162 RIL----KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS---EKFIDAYNRVRL--PFN 232 (335)
T ss_pred HHH----hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC---HHHHHHHHHhcC--CCC
Confidence 775 47999999999922222211 1223568999999999999999999999999 789898877663 467
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (398)
.+.+.|.++..+++. .++..+..+.+.++++++.+.|++.+. .+..+. ++|+|+.++.. +..++.+.+ .++||.
T Consensus 233 ~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-g~f~~~~l~~~--~~~~~~~~l-~~~Gi~ 306 (335)
T PRK14808 233 VSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITDSR-GNFVFIFMEKE--EKERLLEHL-RAKNIA 306 (335)
T ss_pred CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCC-CeEEEEeCCCc--cHHHHHHHH-HHCCeE
Confidence 788899998888875 456677777888888899999988764 666665 88899998742 456666665 589999
Q ss_pred EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 346 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
|+.. .+++||+++. .++.+++++.|++
T Consensus 307 V~~~-----~~~~Risi~~--~~~~~~~~~~l~~ 333 (335)
T PRK14808 307 VRSF-----REGVRITIGK--REENDMILKELEV 333 (335)
T ss_pred EEEC-----CCCeEEecCC--HHHHHHHHHHHHh
Confidence 9952 4789999996 6777788777764
No 94
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.6e-40 Score=310.47 Aligned_cols=355 Identities=19% Similarity=0.215 Sum_probs=261.4
Q ss_pred HhhccCchHHHHHHHHHH--cCCCeEEcCCcc-CCCCCcHHHHHHHHHh----hcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 10 RALETEMPIMVQIQELVR--GAKNAVSLAQGV-VYWQPPKMAMEKVKEL----VWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~-~~~~~~~~v~~a~~~~----~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
++.......+....+... .+...++|+.|. +....+|.+.+++.+. +.......|++..|.+++|+++++++.
T Consensus 26 ~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~ 105 (423)
T PLN02397 26 HVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAY 105 (423)
T ss_pred cCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHc
Confidence 344455555666666654 345678888886 4444444444444443 333335579999999999999999986
Q ss_pred hhcCC--CCCcE-----EEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHH
Q 015890 83 QENKL--YKSSV-----MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADW 154 (398)
Q Consensus 83 ~~~~~--~~~~v-----~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~ 154 (398)
+.... ++++| +.++|+ .++...+..++.+||+|++++|+|+.+...++..|++++.+ +. +++++.+|++.
T Consensus 106 ~~~~~~~~~~~i~~~~i~~g~Ga-~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~l~~~~~~~~d~~~ 183 (423)
T PLN02397 106 GADSPAIKENRVATVQCLSGTGS-LRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTY-RYYDPKTRGLDFDG 183 (423)
T ss_pred CCCCchhhcCeeEeeecccchHH-HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEe-ecccCcCCccCHHH
Confidence 55432 12333 223333 33444444555699999999999999999999999999999 76 44457789999
Q ss_pred HHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--c-cc--cc--cCCcEEE
Q 015890 155 LEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--K-HC--CV--EGDHVVN 224 (398)
Q Consensus 155 l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~-~~--~~--~~~~~i~ 224 (398)
+++.+... ++.+++++++||||||.+++.+++++|+++|+++|+++|+||+| +.+++. + .. .. ..+++++
T Consensus 184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~ 263 (423)
T PLN02397 184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV 263 (423)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence 88887632 22478888899999999999999999999999999999999999 666431 1 11 11 2357999
Q ss_pred EcccccccCCCcceeEEEE--ccCCcHHHHH----HHHHhhccCCCCcchHHHHHHHHHhcCCc---hH---HHHHHHHH
Q 015890 225 LFSFSKAYGMMGWRVGYIA--YPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDL 292 (398)
Q Consensus 225 ~~s~sK~~~~~G~r~G~i~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~ 292 (398)
++|+||.++++|+|+||++ .++ +++++ .+.........+++...|.++..+|+... .+ +++.++.+
T Consensus 264 ~~SfSK~~~~~G~RvG~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~ 341 (423)
T PLN02397 264 AQSYAKNMGLYGERVGALSVVCKS--ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRI 341 (423)
T ss_pred EEECcccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985 332 45444 33344433445677889988888887521 23 56778899
Q ss_pred HHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHH
Q 015890 293 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD 369 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~ 369 (398)
+++++.+.+.|++++. +.+..|++++|+|++++ .+++++|++++||.+.++ + |++++..+.+.
T Consensus 342 ~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~ 407 (423)
T PLN02397 342 ISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------KEQVDRMTKEYHIYMTRD------G--RISMAGLSSKN 407 (423)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------HHHHHHHHHhCCEEECCC------C--eEEEeeCCHHH
Confidence 9999999999998752 46677999999999874 358899999999999742 2 99998668899
Q ss_pred HHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLE 382 (398)
Q Consensus 370 ~~~~~~~l~~~~~ 382 (398)
+++++++|+++++
T Consensus 408 i~~~~~~i~~~~~ 420 (423)
T PLN02397 408 VPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999974
No 95
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-40 Score=303.51 Aligned_cols=316 Identities=21% Similarity=0.363 Sum_probs=250.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+.+.++|+.|.+++++|+.+++++.+.+.......|+ ..|..++|+++++++ ++++++|++|+|+++++..++..
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~ 91 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYLVKL 91 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHHHHH
Confidence 4578999999999999999999999887543456784 578899999999998 58899999999999999998887
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+ +||+|+++.|+|..+...++..|.+++.+ +.+++ +.+|++.+++.+. + ++++++++|+||||.+++.+++.+
T Consensus 92 ~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~-~--~~~v~~~~P~NPtG~~~~~~~l~~ 164 (337)
T PRK03967 92 F--EGKHIVITPPTFGMYSFYAKLNGIPVIDV-PLKED-FTIDGERIAEKAK-N--ASAVFICSPNNPTGNLQPEEEILK 164 (337)
T ss_pred h--CCCeEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCcCHHHHHHhcc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 6 69999999999998888889999999999 77643 5789999988653 3 488889999999999999655554
Q ss_pred HHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890 189 ISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 266 (398)
+++ +++++|+||+|..+.+... .....+++++++|+||.||++|+|+||++++ +++++.+..... .++.
T Consensus 165 ---i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~---~~~i~~~~~~~~--~~~~ 235 (337)
T PRK03967 165 ---VLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN---EEIIDALYRIKP--PFSL 235 (337)
T ss_pred ---HHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC---HHHHHHHHhhcC--CCCC
Confidence 454 6999999999922222111 1223468999999999999999999999998 788888887765 4577
Q ss_pred chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
+.+.|.++..+++. .++..+..+.+.++++.+.+.|.+.. .+.+++|+|++++ +.+.|+ ++||.+
T Consensus 236 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~~~~~~~~~~--------~~~~l~-~~gi~v 300 (337)
T PRK03967 236 NILTMKIVRLALDH-YDLIEERIDYIIKERERVRRELGEYA-----YPSDANFLLLKLD--------AYDYLL-ENGIVV 300 (337)
T ss_pred CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhccCc-----CCCCCcEEEEhHH--------HHHHHH-HCCEEE
Confidence 89999999999975 45666666777777888888887642 2566999998763 456665 789999
Q ss_pred ecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 347 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+++.. ..++++|++++. .++.++++++|.++...
T Consensus 301 ~~~~~-~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 301 RKLSG-RLEGHIRVTVGK--REENDEFIKALKEIKEG 334 (337)
T ss_pred EeCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence 87653 346799999996 56666777777665443
No 96
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.9e-40 Score=303.23 Aligned_cols=308 Identities=18% Similarity=0.275 Sum_probs=241.9
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
.+++|+.+.+++... .....| |.....++|+++++++ ++++++|++|+|+++++..++. ++
T Consensus 17 ~~i~l~~Nenp~~~~-------------~~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~~-~~ 77 (332)
T PRK06425 17 RIIDFSANINDFMDI-------------GDISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLLS-YI 77 (332)
T ss_pred CEEEeccccCCCcCh-------------hhcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH-Hh
Confidence 689999999988411 113457 6666789999999987 7889999999999999999997 46
Q ss_pred cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
++| .|+++.|+|+.+...++..|++++.+ |.++. .+|.+.+++ .+ +++|++++||||||.+++.+++++|+
T Consensus 78 ~~~-~vv~~~P~y~~y~~~~~~~G~~v~~v-p~~~~--~~~~~~l~~---~~--~k~v~l~nP~NPTG~~~s~~~~~~l~ 148 (332)
T PRK06425 78 NVG-NIIIVEPNFNEYKGYAFTHGIRISAL-PFNLI--NNNPEILNN---YN--FDLIFIVSPDNPLGNLISRDSLLTIS 148 (332)
T ss_pred CCC-cEEEeCCChHHHHHHHHHcCCeEEEE-eCCcc--cCcHHHHhh---cC--CCEEEEeCCCCCcCCccCHHHHHHHH
Confidence 676 57788999999999999999999999 87653 345555542 23 59999999999999999999999999
Q ss_pred HHHHHcCCEEEEeece--eccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890 191 DLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265 (398)
Q Consensus 191 ~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~ 265 (398)
++|+++|+++|+||+| |.+++.... ....+++++++||||.+|+||+|+||++++ +++++.+..... +++
T Consensus 149 ~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~---~~li~~l~~~~~--~~~ 223 (332)
T PRK06425 149 EICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD---DYNMKISRKITE--PWS 223 (332)
T ss_pred HHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC---HHHHHHHHHcCC--CCc
Confidence 9999999999999999 555432111 112468999999999999999999999999 789888887654 344
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (398)
.+.+++.++. ... .+.++++.++.++++++.+.+.|++++. .+..+.+++|+|+.++ +..++.+.++ ++||.
T Consensus 224 ~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~g~f~~~~~~----~~~~~~~~l~-~~gi~ 295 (332)
T PRK06425 224 VCDPAIDFIR-SID-LDYVAKHSLDIMENERSYLINNLEAMGF-RAAGDPSANFITFMIP----DAHDFYSYLL-KNGIL 295 (332)
T ss_pred cCHHHHHHHH-Hhh-hHHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCCCceEEEEEcC----CHHHHHHHHH-HCCeE
Confidence 4444433322 111 1345667788899999999999998864 5554445899999986 4678888886 68999
Q ss_pred EecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 346 VIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 346 v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
++|+..|+. ++++||+++. .++.++++++|++++
T Consensus 296 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 331 (332)
T PRK06425 296 VRLLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL 331 (332)
T ss_pred EEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 999998853 5799999995 678888888887654
No 97
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=309.02 Aligned_cols=317 Identities=22% Similarity=0.315 Sum_probs=252.4
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+.+.++|+.|.+++++++.+ .+ . ....|+. .+..++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 30 ~~~~~~l~~ne~~~~~~~~~--~~----~--~~~~Yp~-~~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 30 GRGDIWINANESPFNNEYKL--DL----A--RLNRYPE-CQPPELINAYSAYA----GVAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCCcEEeeCCCCCCCCChhh--hh----H--HhccCCC-CCHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHHHH
Confidence 35679999999999877653 11 1 1456854 45799999999986 78999999999999999999999
Q ss_pred hccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 109 LCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 109 l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
++++| |+|+++.|+|..|...++..|++++.+ +.++ ++.+|.+.++. + ++ +++|++++|+||||.+++.++++
T Consensus 97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v-~~~~-~~~~~~~~l~~-~-~~--~~li~i~nP~NPTG~~~~~~~l~ 170 (354)
T PRK04635 97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKAL-PLTA-DYQLPLDYIEQ-L-DG--AKLVFICNPNNPTGTVIDRADIE 170 (354)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCC-CCCCCHHHHHh-c-cC--CCEEEEeCCCCCCCccCCHHHHH
Confidence 99998 899999999999999899999999999 8764 35788888873 3 33 59999999999999999988888
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+|++.|+ ++++|+||+| +...... ......+++++++|+||++|++|+|+||++++ +++++.+..... .+
T Consensus 171 ~l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~---~~~~~~l~~~~~--~~ 243 (354)
T PRK04635 171 QLIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN---EELIEILMRVIA--PY 243 (354)
T ss_pred HHHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC---HHHHHHHHhhcC--CC
Confidence 8888776 4999999999 4321110 11123468899999999999999999999998 788888876543 56
Q ss_pred CcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 265 CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
+.+.+.+.++..++... .+++++..+.+.++++.+.+.|++++.+.+.++. ++|+|++++ +..++.+.+ .++|
T Consensus 244 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~----~~~~~~~~l-~~~g 317 (354)
T PRK04635 244 PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFD----DVDAVFKAL-WDAG 317 (354)
T ss_pred CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECC----CHHHHHHHH-HHCC
Confidence 67788888888888652 3556777788888899999999988755666665 789999886 355666655 6899
Q ss_pred eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
|.++.+.....++++|||++. .+++++++++|++
T Consensus 318 v~v~~~~~~~~~~~lRis~~~--~e~~~~l~~al~~ 351 (354)
T PRK04635 318 IVARAYKDPRLANCIRFSFSN--RAETDKLIGLIRN 351 (354)
T ss_pred EEEEECCCCCCCCeEEEEeCC--HHHHHHHHHHHHH
Confidence 999876544457899999984 7888888887754
No 98
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=303.96 Aligned_cols=331 Identities=23% Similarity=0.269 Sum_probs=251.1
Q ss_pred HHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CC---CCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 47 MAMEKVKELVW---DPSISKYGADEGLPELRDALVKKLNQENK-LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 47 ~v~~a~~~~~~---~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~---~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
.+++++.+.+. .....+|++..|.+++|+.+++++.+..+ .. .++|++|+|+++++..++.+++++||+|+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~ 99 (388)
T PRK08637 20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLP 99 (388)
T ss_pred chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEc
Confidence 44444444333 23477899999999999999999876542 33 2578999999999999999999999999999
Q ss_pred CCCCcChhhHHH-hcCcEEEEeccCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-
Q 015890 120 APYYFNSYMSFQ-MTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA- 195 (398)
Q Consensus 120 ~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~- 195 (398)
+|+|+.+...+. ..|.+++.+ +.+.+++.+|++.+++.++ .....+++++++||||||.+++.+++++|+++|++
T Consensus 100 ~P~y~~~~~~~~~~~g~~vv~v-~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~ 178 (388)
T PRK08637 100 DHNWGNYKLTFNTRRGAEIVTY-PIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKEL 178 (388)
T ss_pred CCCCccHHHHHHHhcCCEEEEe-cccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999998754 689999999 7742333579999999887 22223567788999999999999999999999875
Q ss_pred ----cCCEEEEeece--eccCCCccc----c--ccCCcE--EEEcccccccCCCcceeEEEEccC---CcHHHHHHHHHh
Q 015890 196 ----AGSWLVVDNTY--FMYDGRKHC----C--VEGDHV--VNLFSFSKAYGMMGWRVGYIAYPS---EVEGFATQLLKV 258 (398)
Q Consensus 196 ----~~~~livDe~~--~~~~~~~~~----~--~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~---~~~~~~~~l~~~ 258 (398)
+++++|+||+| +.+++.... . ...+++ +.++|+||.+++||+|+||++.+. ..+++++.+...
T Consensus 179 ~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~ 258 (388)
T PRK08637 179 ADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKK 258 (388)
T ss_pred HhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHH
Confidence 89999999999 666553221 1 123464 445699999999999999998652 115666666532
Q ss_pred h----ccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCC
Q 015890 259 Q----DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHL 329 (398)
Q Consensus 259 ~----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~ 329 (398)
. ....++.|.+.|.++..+++... .+..+....++++++.+.+.|++.+ .+.+..+.+++|+|++++. .
T Consensus 259 ~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--~ 336 (388)
T PRK08637 259 VKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--V 336 (388)
T ss_pred HHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--H
Confidence 1 12235778999999999997521 2234445567777777888886652 3566778889999999973 2
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+..++++++++++||.+.+. .++++||+++..+.+++++++++|.++++++
T Consensus 337 ~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 337 DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 56788888877789988753 4678999999878999999999999998764
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=301.14 Aligned_cols=322 Identities=27% Similarity=0.385 Sum_probs=260.2
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
++++|+.|.+++++++.+.+++.+.+.. ...| +..|..++|+.+++++ ++++++|++++|+++++..++..++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHHHHhc
Confidence 6899999999998899999999887653 4567 5678999999999998 5778899999999999999999999
Q ss_pred cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
++||+|+++.|+|..+...++..|.+++.+ +.+++ +.+|++.+++.+++++ ++|++++|+||||.+++.+++.+++
T Consensus 96 ~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~l~~l~ 171 (352)
T PRK03321 96 GPGDEVIFAWRSFEAYPILVQVAGATPVQV-PLTPD-HTHDLDAMAAAITDRT--RLIFVCNPNNPTGTVVTPAELARFL 171 (352)
T ss_pred CCCCEEEeCCCCHHHHHHHHHHcCCEEEEc-cCCCC-CCCCHHHHHHhhccCC--CEEEEeCCCCCcCCCcCHHHHHHHH
Confidence 999999999999988888889999999998 77643 4679999999997654 8999999999999999977777776
Q ss_pred HHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 191 DLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 191 ~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+.| ++++++|+||+| +.+.+.... ....+++++++|+||.||++|+|+||++++ +++++.+.+.. ..+
T Consensus 172 ~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~--~~~ 245 (352)
T PRK03321 172 DAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH---PEVIAALRKVA--VPF 245 (352)
T ss_pred HhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC---HHHHHHHHHhc--CCC
Confidence 654 369999999999 555442211 112468999999999999999999999998 88998887654 367
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
+.+.+.|.++..++.. .+...+..+...++++.+.+.|++.+. .+..+ +++|+|++++. +..++.+.| +++||
T Consensus 246 ~~s~~~q~~a~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~-~g~~i~i~l~~---~~~~~~~~l-~~~gI 318 (352)
T PRK03321 246 SVNSLAQAAAIASLAA-EDELLERVDAVVAERDRVRAALRAAGW-TVPPS-QANFVWLPLGE---RTADFAAAA-AEAGV 318 (352)
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCC-CCCEEEEeCCC---CHHHHHHHH-HHCCE
Confidence 8899999988888875 333445555566667788888887754 44444 58999999853 467788877 58999
Q ss_pred EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.+.+ |+ ..+|||+++. .++.++++++|.+++.
T Consensus 319 ~v~~---~~-~~~iRi~~~~--~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 319 VVRP---FA-GEGVRVTIGA--PEENDAFLRAARAWRA 350 (352)
T ss_pred EEEc---cC-CCcEEEeeCC--HHHHHHHHHHHHHHhc
Confidence 9987 32 4569999985 7888899988887643
No 100
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.8e-39 Score=295.19 Aligned_cols=310 Identities=19% Similarity=0.230 Sum_probs=244.1
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~ 108 (398)
.++++|+.+.+++++|+....+ .. ...|+ +.. .++++.+++++ +++ +++|++|+|+++++..+..
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~--~~-----~~~Yp-~~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~l~~- 89 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA--DA-----WRRLP-EDD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRALPA- 89 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCH--HH-----HHhCC-Cch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHHHHH-
Confidence 4589999999999876332221 11 23474 444 78888888877 665 5899999999999997755
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++++|+ |+++.|+|+.+...++..|.+++.+ +.+. +.+ ... .+++++++||||||.+++.+++++
T Consensus 90 ~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v-~~~~-------~~~----~~~--~~~v~l~nPnNPTG~~~s~~~l~~ 154 (339)
T PRK06959 90 LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPL-DEAA-------DTL----PAA--LTHLIVVNPNNPTAERLPAARLLR 154 (339)
T ss_pred hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEee-cccc-------hhc----ccc--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 567776 8999999999999999999999988 6543 122 122 378999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 266 (398)
+++.|.+++.++|+||+| +.+..........+++++++||||.||++|+|+||++++ +++++.+.+... +++.
T Consensus 155 l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~---~~li~~l~~~~~--~~~v 229 (339)
T PRK06959 155 WHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA---PALLAALRDALG--AWTV 229 (339)
T ss_pred HHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecC---HHHHHHHHHhcC--CCCC
Confidence 999999899999999999 433211111113467999999999999999999999999 899999988765 5667
Q ss_pred chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
+.++|.++.++|+. .++.++.++.+.++++++.+.|++++. .+. + +++|+|++++ +..++.+.|. ++||.|
T Consensus 230 s~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~-~~~f~~~~~~----~~~~l~~~l~-~~GI~v 300 (339)
T PRK06959 230 SGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLRAHGF-AVH-A-TPLFSWTDDP----RAAALHAALA-RRGIWT 300 (339)
T ss_pred cHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-C-cceEEEEeCC----CHHHHHHHHH-hCCeEE
Confidence 89999999999985 567788889999999999999998864 444 3 4789999875 3567777775 889999
Q ss_pred ecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 347 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+. |+..+++||+++. +.++.++++++|+++++.+..
T Consensus 301 r~---~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 301 RY---FAPPPSVRFGLPA-DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EE---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhh
Confidence 85 3456799999964 567899999999888777653
No 101
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.4e-38 Score=287.93 Aligned_cols=299 Identities=21% Similarity=0.320 Sum_probs=226.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.++++ |+.+.+++.+++.. ...|+. ...+++++++++ + ++|++|+|+++++..++..+
T Consensus 8 ~~~i~l~~~~np~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 8 EGLIDFSASVNPYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF----G---EPIVITAGITEALYLIGILA 74 (311)
T ss_pred cceeEecCCCCCCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH----C---CCEEECCCHHHHHHHHHHhh
Confidence 46999999998886 68889999877654 346742 367888888876 3 57999999999999888544
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
.+||+|+++.|+|+.+...++..|.+++.+ + +|++.+++.++ + ++++++++|+||||.+++.+++++|
T Consensus 75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~-------~d~~~l~~~~~-~--~~~vi~~~P~NPTG~~~~~~~l~~l 142 (311)
T PRK08354 75 -LRDRKVIIPRHTYGEYERVARFFAARIIKG-P-------NDPEKLEELVE-R--NSVVFFCNPNNPDGKFYNFKELKPL 142 (311)
T ss_pred -CCCCeEEEeCCCcHHHHHHHHHcCCEEeec-C-------CCHHHHHHhhc-C--CCEEEEecCCCCCCCccCHHHHHHH
Confidence 489999999999999999999999998765 2 47888888876 3 3789999999999999999999999
Q ss_pred HHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890 190 SDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 267 (398)
+++|+++|+++|+||+| |.+++.. ...+++++++|+||.|+++|+|+||+++. . +.+..... .+..+
T Consensus 143 ~~~a~~~~~~li~De~y~~f~~~~~~---~~~~~vi~~~S~SK~~~l~GlRiG~~v~~---~---~~l~~~~~--~~~~~ 211 (311)
T PRK08354 143 LDAVEDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGF---E---EAFRSVRM--PWSIG 211 (311)
T ss_pred HHHhhhcCcEEEEeCcchhccccccc---cCCCcEEEEeccHhhcCCccceeeeeeeh---H---HHHHHcCC--CccCC
Confidence 99999999999999999 6654421 22678999999999999999999999973 3 34444443 44556
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (398)
.+.+.++..+++...+++.+..+.+.+.++.+.+.+ ...+. ++|++++++ +..++++.+ .++||.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~-~~~~~~~~~----~~~~~~~~l-~~~gv~v~ 278 (311)
T PRK08354 212 STGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKAL-------YVKSD-ANFFIKDVG----DAEKFVEFL-KRNGILVR 278 (311)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-CcEEEEECC----CHHHHHHHH-HHCCeEEE
Confidence 666777766666322344444455555555444433 12344 666667664 456788876 48899999
Q ss_pred cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
||..|+.++++||+++. .++.++++++|++
T Consensus 279 ~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~ 308 (311)
T PRK08354 279 DCTSFGLPGYIRFSVRD--REENEKLIRALRE 308 (311)
T ss_pred ecccCCCCCeEEEEeCC--HHHHHHHHHHHHH
Confidence 99998777999999996 4445555555544
No 102
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=277.61 Aligned_cols=322 Identities=25% Similarity=0.372 Sum_probs=266.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCc
Q 015890 61 ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGV 135 (398)
Q Consensus 61 ~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~ 135 (398)
...|++-.|.+++|+++++++.+..+ .+|+++++++|+|.+++.++..|.+|||.-|+|.|.|+++..-++. .|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 56788889999999999999987653 3689999999999999999999999999999999999998876654 478
Q ss_pred EEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ecc
Q 015890 136 THILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMY 209 (398)
Q Consensus 136 ~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~ 209 (398)
++++++-...+|++++.+.+|++++ .+.+++.|+|+||+||.|.++++|++..+.+++.++|+.+|+||+| ..|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 9998833346689999999999886 3445899999999999999999999999999999999999999999 344
Q ss_pred CCCcc---------ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC
Q 015890 210 DGRKH---------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 280 (398)
Q Consensus 210 ~~~~~---------~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 280 (398)
+...+ .....+.+-++.|+||-||+||+|+|.+...+ +.++....++.. ....++..|..++.+|.+
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n--e~VvsaA~kmss--f~~vSs~tQ~~la~LLSD 349 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN--EDVVSAATKMSS--FGLVSSQTQYLLASLLSD 349 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC--hHHHHHHHHHhh--ccCCcHHHHHHHHHHhch
Confidence 33221 11135678889999999999999999999887 677776666654 456788999999999986
Q ss_pred ---CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCC
Q 015890 281 ---GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGAC 352 (398)
Q Consensus 281 ---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~ 352 (398)
.+.++++..++++.+.+++.+.|++++. .+....+|+|+|+++.+-- ....+++++++.+-++.+.||+.|
T Consensus 350 ~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~ 428 (471)
T KOG0256|consen 350 EEFTREYLRENNKRLRIRHRYIVEGLKALGI-PCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSC 428 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCC-ceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcc
Confidence 2256777888888899999999999887 7888888999999996532 234567888886669999999987
Q ss_pred C--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 353 G--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 353 ~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
. .+||+|+++....++.++-++++|++.+....+.
T Consensus 429 ~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~~ 465 (471)
T KOG0256|consen 429 HCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQP 465 (471)
T ss_pred eecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhcc
Confidence 5 6899999999866666666999999999865543
No 103
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.3e-38 Score=290.27 Aligned_cols=306 Identities=21% Similarity=0.324 Sum_probs=235.8
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.+++++++..+.. .. ...|+... .++|++++++++ +++|++|+|+++++..+..
T Consensus 20 ~~~i~l~~ne~p~~~~~~~~~~--~~-----~~~yp~~~--~~Lr~~ia~~~~------~~~I~it~Gs~~al~~~~~-- 82 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVPAIPA--DA-----WARLPETD--DGLEAAARAYYG------APQLLPVAGSQAAIQALPR-- 82 (330)
T ss_pred HHheeecCCcCCCCCCCcccCH--HH-----HHhCCCCh--HHHHHHHHHHhC------CCCEEECcCHHHHHHHHHH--
Confidence 3579999999887655322211 11 22364332 789999999973 4799999999999998863
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+.+||+|+++.|+|+.+...++..|++++.+ +.+ .+++.++ + ++++++++||||||.+++.+++++|
T Consensus 83 ~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~---------~~~~~~~-~--~~~v~l~nP~NPTG~~~s~~~l~~l 149 (330)
T PRK05664 83 LRAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEA---------EVEAALD-S--LDVLVVVNPNNPTGRRFDPARLLAW 149 (330)
T ss_pred ccCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chh---------hHhhhhc-C--CCEEEEeCCcCCCCCccCHHHHHHH
Confidence 5789999999999999999999999999988 542 3455553 3 4789999999999999999999999
Q ss_pred HHHHHHcCCEEEEeeceeccCC-Cc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890 190 SDLCKAAGSWLVVDNTYFMYDG-RK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~~~~~~-~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 267 (398)
+++|+++|+++|+||+|..+.. .. ......+++++++||||.||+||+|+||++++ +++++.+..... +++.+
T Consensus 150 ~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~---~~l~~~~~~~~~--~~~~~ 224 (330)
T PRK05664 150 HARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE---PALLRALAELLG--PWTVS 224 (330)
T ss_pred HHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeC---HHHHHHHHHhcC--CCCCC
Confidence 9999999999999999933322 11 11123468999999999999999999999998 889998877654 45678
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (398)
.+.+.++..+|.. ..+.++.++.+.++++.+.+.|++.+. ...++ ..+|+|+.++ +..++.+.| .++||.|+
T Consensus 225 ~~~~~~~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~-~~~f~~~~~~----~~~~~~~~l-~~~gi~v~ 296 (330)
T PRK05664 225 GPTRWLAQAALAD-TPWQRRQRERLLAASQRLAALLRRHGL-TPAGG-CALFQWVRTE----DAAALHEFL-ARRGILTR 296 (330)
T ss_pred HHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCC-cceEEEEecC----CHHHHHHHH-HHCCeEEE
Confidence 8899999999985 456677788889999999999988754 32222 2488888874 466777766 58899998
Q ss_pred cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+ |..++++||+++. +.++++++.+.|++..+
T Consensus 297 ~---f~~~~~iRis~~~-~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 297 L---FEQPASLRFGLPA-DEADWARLDQALLAYRK 327 (330)
T ss_pred E---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHh
Confidence 5 4456899999995 56666666666665543
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.5e-38 Score=290.21 Aligned_cols=308 Identities=24% Similarity=0.370 Sum_probs=248.2
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+++.++|+.|.++.++| ..+.... ....|++.. .+++|+.+++++ ++++++|++++|+++++..+...
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~y~~~~-~~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPP--VPPIPAS-----AWARYPDPE-YDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred hhheeEccccCCCCCCC--hhhcchH-----HHhhCCCcc-HHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHH
Confidence 56789999999888765 2222111 245676555 499999999987 67789999999999999997666
Q ss_pred hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+.+| +|+++.|+|..+...++..|.+++.+ + |++.+++.++ . ++++++++|+||||.+++.+++++
T Consensus 84 -l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~-~--------d~~~l~~~~~-~--~~~v~i~~p~NPtG~~~~~~~~~~ 149 (330)
T TIGR01140 84 -LAPG-RVLVLAPTYSEYARAWRAAGHEVVEL-P--------DLDRLPAALE-E--LDVLVLCNPNNPTGRLIPPETLLA 149 (330)
T ss_pred -hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEe-C--------CHHHHHhhcc-c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 4677 79999999999999999999999888 4 7888988884 3 478999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
|+++|+++|+++|+||+| +.+.. .... ...+++++++|+||.+|++|+|+||++++ +++++.+..... .+
T Consensus 150 l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~---~~~~~~l~~~~~--~~ 223 (330)
T TIGR01140 150 LAARLRARGGWLVVDEAFIDFTPDA-SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH---PALLARLREALG--PW 223 (330)
T ss_pred HHHHhHhcCCEEEEECcccccCCcc-chhhHhccCCCEEEEEecchhhcCchhhhhheeCC---HHHHHHHHhcCC--CC
Confidence 999999999999999999 44321 1111 13478899999999999999999999999 788888877664 45
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
+.+.++|.++..+++. .++.++..+.++++++.+.+.|++.+.+++.+ .+++|+|++++. ..+++++|+ ++||
T Consensus 224 ~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~----~~~l~~~l~-~~gi 296 (330)
T TIGR01140 224 TVNGPARAAGRAALAD-TAWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD----AAALHEALA-RRGI 296 (330)
T ss_pred CchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC----HHHHHHHHH-HCCE
Confidence 6788899999999985 46667788889999999999999987655544 458999999863 568888886 6899
Q ss_pred EEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHH
Q 015890 345 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 345 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
.+.||..|. ..++|||+++. ..++ ++++++|
T Consensus 297 ~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 297 LIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred EEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 999999885 35799999996 3343 5555554
No 105
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.5e-35 Score=275.33 Aligned_cols=337 Identities=31% Similarity=0.490 Sum_probs=274.9
Q ss_pred EEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhc
Q 015890 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
+||+.|+++...+|..+.++.+.-.......|++..+..++++.+++++...++. ..+++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 4789999999888888887765222333567888899999999999999887653 36789999999999999999999
Q ss_pred cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh--HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~--e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++||+|+++.++|+++...++..|.+++.+ +.++.+. .+. +.++....++ +++|++++++||||.++|.+++++
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~~~~~~~~~~~~~~~--~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGG-FLLDLELLEAAKTPK--TKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEE-ecccccC-CccCHHHHHhhcCcc--ceEEEEECCCCCCCcccCHHHHHH
Confidence 999999999999999999999999999998 7765542 232 5566655544 599999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
|+++|+++|+++|+|++| +.+.+... .....+.+++++|++|.++.+|.++|++++++ +++.+.+.......
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~--~~~~~~~~~~~~~~ 234 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP--EELLERLKKLLPYT 234 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH--HHHHHHHHHHHHhc
Confidence 999999999999999999 44444332 23345578999999999988999999999983 27888887777665
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+++.+...+.++..+++....+.++..+.+.++++++.+.|++.+...+..+..++++|+.++.. ...+.+.+++.++
T Consensus 235 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~ 312 (350)
T cd00609 235 TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG--DDEEFLERLLLEA 312 (350)
T ss_pred ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC--ChHHHHHHHHHhC
Confidence 67888999999999998743677888889999999999999988775434556689999998753 2445566677788
Q ss_pred CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 378 (398)
Q Consensus 343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~ 378 (398)
||.+.++..|. .+.++|++++.. .+|+++++++|+
T Consensus 313 gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 313 GVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 99999988775 678999999986 889999998875
No 106
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-35 Score=258.34 Aligned_cols=319 Identities=21% Similarity=0.310 Sum_probs=261.7
Q ss_pred CCCCCCCCCcHHHHHHHHHHHh-hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEE
Q 015890 61 ISKYGADEGLPELRDALVKKLN-QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137 (398)
Q Consensus 61 ~~~y~~~~~~~~~~~~l~~~l~-~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~ 137 (398)
..+|+++.|.+++...+.++.. ..+. ....+|++|+|.|.+++.+++.+++.||.|++...+|.+.....+..|+++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ 172 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI 172 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence 5689999999999999998655 2221 235689999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCCCChHHHHHhhcc-------CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--e
Q 015890 138 ILVGPCSSKTLHPDADWLEKTLET-------KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F 207 (398)
Q Consensus 138 ~~~~~~~~~~~~~d~e~l~~~l~~-------~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~ 207 (398)
+++ ++|++| +++|.|++.++. ++.+++++.. +.+||||..++.+..++|.++|++|++++|.||.| +
T Consensus 173 ipv-~md~~G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 173 IPV-KMDQDG--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred Eec-cccCCC--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 999 888876 589999998862 2335666654 77999999999999999999999999999999999 3
Q ss_pred ccC---CCc--------------------cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 208 MYD---GRK--------------------HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 208 ~~~---~~~--------------------~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
-+. +.. ...+..++||-..||||.++ ||+|+||+.++ +.+++++.......+.
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~---~~~l~ril~~ae~~t~ 325 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN---SLFLKRILDLAEVATS 325 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC---HHHHHHHhhhcceeec
Confidence 332 110 01123578999999999997 99999999999 7888888887777777
Q ss_pred CcchHHHHHHHHHhcC-Cc----hHHHHHHHHHHHHHHHHHHHhcc-CCC--CccccCCccEEEEeeCC-------CCCC
Q 015890 265 CASIISQHLALYSLQT-GP----EWVTERVKDLVRNREIIREALSP-LGE--GAVKGGEGAIYLWARLP-------EKHL 329 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~--~~~~~~~~~~~~~~~~~-------~~~~ 329 (398)
+++...|..+.++|+. +. +|+.+.+..+..+++.+...|.+ ++. .+++.|.+|+|+|++++ +...
T Consensus 326 ~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~ 405 (472)
T KOG0634|consen 326 GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSIN 405 (472)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchH
Confidence 7888999988888876 22 57777888888888888888876 343 36678999999999997 4333
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCC------CC-eEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGC------RG-HLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~------~~-~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+..++....+.++||.+.+|+.|.. .. ++|++++..+.++++++++++..++++...
T Consensus 406 q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 406 QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence 3567777777899999999998842 22 899999997888999999999999998654
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2.1e-33 Score=265.35 Aligned_cols=349 Identities=14% Similarity=0.095 Sum_probs=259.3
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS 91 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~ 91 (398)
....+..+..+.|.+.++|..|.+ ++.+|+ .+.+++.+++..+ ...|+++.+..++|++++++++ .++
T Consensus 23 ~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~------~~~ 95 (460)
T PRK13238 23 TREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFG------YPY 95 (460)
T ss_pred CHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhC------CCc
Confidence 444556666778999999999998 676655 5777777777554 4579999999999999999984 357
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-------CCCC--CChHHHHHhhccC
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-------KTLH--PDADWLEKTLETK 162 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~--~d~e~l~~~l~~~ 162 (398)
+++|+|+++|+..++.+++++|| |+++.|.|..+...++..|.+++.+ +.++ +++. +|++.|++.+++.
T Consensus 96 vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v-~~~~~~~~~~~~~f~g~id~e~Le~~i~~~ 173 (460)
T PRK13238 96 TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDL-VIDEALDTGSRHPFKGNFDLEKLEALIEEV 173 (460)
T ss_pred EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEE-eccccccccccccccCCcCHHHHHHHHhhc
Confidence 99999999999999999999999 9999999999998899999999988 7753 2444 9999999999842
Q ss_pred --CCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece-e---ccCC-----Ccccccc-------CCcEE
Q 015890 163 --PTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY-F---MYDG-----RKHCCVE-------GDHVV 223 (398)
Q Consensus 163 --~~~~~v~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~-----~~~~~~~-------~~~~i 223 (398)
.++++|++++|+|||| .+++.+++++|.++|++||+++|+|+++ . .|.. ....... .-..+
T Consensus 174 ~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~ 253 (460)
T PRK13238 174 GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADG 253 (460)
T ss_pred CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcE
Confidence 1369999999999998 8999999999999999999999999977 2 1211 1110000 00123
Q ss_pred EEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----ccCCCCc-chHHHHHHHHHhcC--CchHHHHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----DNIPICA-SIISQHLALYSLQT--GPEWVTERVKDLVRNR 296 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----~~~~~~~-~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~ 296 (398)
++.|..|....+ ..|++++++ +++++.++... ...+++. +...+.|++.+++. .+++...+ .+++
T Consensus 254 ~~~Sg~K~g~~~--~GG~i~~~d--~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~ 325 (460)
T PRK13238 254 LTMSAKKDAMVN--IGGLLCFRD--EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV 325 (460)
T ss_pred EEEecccCCCCc--ceeEEEcCh--HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence 334445543211 135677775 67888887663 2223444 44447777766654 22333333 3357
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCC-------------CC
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGC-------------RG 356 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~ 356 (398)
++|.+.|.+.|. .+..|.+++|+++++.+.. -.+.+++.+|+++.||.+.|++.|.. .+
T Consensus 326 ~~l~~~L~~~G~-~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~ 404 (460)
T PRK13238 326 EYLGEGLEEAGV-PIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAE 404 (460)
T ss_pred HHHHHHHHHCCC-CeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccc
Confidence 888888888765 7788999999999885421 13578999999999999999987631 36
Q ss_pred eEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 015890 357 HLRISFGG--LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 357 ~iRi~~~~--~~~~~~~~~~~~l~~~~~~ 383 (398)
.+|+++++ -+.++++.+.++|.+..++
T Consensus 405 ~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 405 LLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred eEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 89999997 5889999999999887644
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=233.25 Aligned_cols=354 Identities=20% Similarity=0.316 Sum_probs=264.5
Q ss_pred HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHH----HhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCC--
Q 015890 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVK----ELVWD----PSISKYGADEGLPELRDALVKKLNQENKL-- 87 (398)
Q Consensus 18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~----~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-- 87 (398)
.|.++....+. .+.+.++.|.|... |++.+... +.+.+ ....+|..++|...+.+++++.+.+.+|.
T Consensus 19 lMdDl~d~Lrt-~g~imLggGNPa~i--Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwni 95 (417)
T COG3977 19 LMDDLNDGLRT-PGAIMLGGGNPARI--PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNI 95 (417)
T ss_pred HHHHHHhhccC-CCceeeCCCCcccC--hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCC
Confidence 34555544443 44888888866543 44443322 22222 22678988999999999999999999964
Q ss_pred CCCcEEEecChHHHHHHHHHHhcc---CC--CEEEEe-CCCCcChhhHHHhcCcEEEEecc---CCCC---CCCCChHHH
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCD---AG--DSVVMF-APYYFNSYMSFQMTGVTHILVGP---CSSK---TLHPDADWL 155 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~---~g--d~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~---~~~~---~~~~d~e~l 155 (398)
+.+||.+|+|+..+.+.++-.+.+ .| .+|++| .|.|-+|..+--.-. -.+.++| ..+. .+++|.+++
T Consensus 96 t~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l 174 (417)
T COG3977 96 TAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHL 174 (417)
T ss_pred ccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHc
Confidence 688999999999999999887753 23 367775 899988876321111 1122212 1222 246677666
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc---ccccCCcEEEEcccccc
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH---CCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~---~~~~~~~~i~~~s~sK~ 231 (398)
.-. +. +.+|+++.|.||||.+++++++.+|-+++++||+++++|.+| .+|.+.-+ .....+|.+.|.|+||.
T Consensus 175 ~i~--e~--~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~ 250 (417)
T COG3977 175 HIG--ES--TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL 250 (417)
T ss_pred ccc--cc--cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhc
Confidence 543 33 589999999999999999999999999999999999999999 66655433 33456899999999994
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHH-----HHHHHHHHhc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR-----NREIIREALS 304 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~-----~~~~l~~~l~ 304 (398)
|+||.|+|.++.+ ++++..+.......+..+..+.++.+..+++.++ ..-++..+-..+ ....++..+.
T Consensus 251 -GLPG~R~GIiIan---e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp 326 (417)
T COG3977 251 -GLPGSRCGIIIAN---EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLP 326 (417)
T ss_pred -CCCCcceeEEEcc---HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcC
Confidence 7999999999999 8999999988887788888899999999999754 222333333333 3344555665
Q ss_pred cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------CCCeEEEEecCCCHHHHHHHHH
Q 015890 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------CRGHLRISFGGLVEDDCKAAAD 375 (398)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---------~~~~iRi~~~~~~~~~~~~~~~ 375 (398)
+.++ .++.|+|+.|.|+-+.....+..++.++| +..|+.+.||..|- ...++|+++.. +.+++++++.
T Consensus 327 ~~~~-~iHkpEGAIFlWLWf~dLPItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~Gva 403 (417)
T COG3977 327 EYRC-LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKGVA 403 (417)
T ss_pred ccce-eeecCCcceeehhhhccCCCCHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHHHH
Confidence 5666 78899999999999887777899999987 68999999999762 24689999995 8899999999
Q ss_pred HHHHHHHHHhc
Q 015890 376 RLRRGLEELVK 386 (398)
Q Consensus 376 ~l~~~~~~~~~ 386 (398)
+|.+.+++.-+
T Consensus 404 ~lae~ve~~yq 414 (417)
T COG3977 404 ILAEEVERAYQ 414 (417)
T ss_pred HHHHHHHHHHh
Confidence 99999887654
No 109
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.6e-33 Score=262.19 Aligned_cols=337 Identities=18% Similarity=0.178 Sum_probs=245.9
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVN 104 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~ 104 (398)
.+.+.|+.+.... .|+.+++++.+.+.+... ..+.......+..+.+.+.+.+++|. ++++|++++|+|++++.
T Consensus 18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 3578888887663 578999999888754210 01101111233334444445555577 68899999999999999
Q ss_pred HHHHhc----cCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 105 IVLTLC----DAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 105 ~~~~l~----~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
++.++. ++||+|++++++|++ +...++..|++++.+ +.+.+ +.+|++++++.+++++ ++|++++++||
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~i~~~~n~ 172 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL-PLGAD-RLPDVDLLPELITPRT--RILALGQMSNV 172 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE-ecCCC-CcCCHHHHHHhcCcCc--EEEEEeCCccc
Confidence 999983 789999999999965 455667889999998 77653 5789999999998765 99999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
||.++| +++|+++|+++|+++|+|++| ++..... ....+.++++.|++|.+|++| +|+++.+ +++++.+
T Consensus 173 tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~~~--~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~~~~~~ 242 (401)
T PRK10874 173 TGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFPAD--VQALDIDFYAFSGHKLYGPTG--IGVLYGK---SELLEAM 242 (401)
T ss_pred ccCcCC---HHHHHHHHHHcCCEEEEECCcccccccCC--chhcCCCEEEEecccccCCCc--cEEEEEc---hHHHhcC
Confidence 999999 889999999999999999999 4432222 122235588899999988776 5998888 6776655
Q ss_pred HHhhc---------------------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 256 LKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 256 ~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
..... ....+.+.+.+.++.++++... ....+..++..+.++++.+.|++++++.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~ 322 (401)
T PRK10874 243 SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFR 322 (401)
T ss_pred CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 32210 1123556667777777776421 2234566777788899999998886656665
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
++.+.++++.++. .+..++.+.| .++||.+++|..|. ..++||+|++. .+++|++++++.|+++++.+
T Consensus 323 ~~~~~i~~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 323 CQDSSLLAFDFAG--VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CCCCcEEEEEECC--cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 4445666667653 2466777766 58999999988763 35899999998 89999999999999887753
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=7.4e-33 Score=261.12 Aligned_cols=333 Identities=18% Similarity=0.182 Sum_probs=244.7
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCC-------CcHHHHHHHHHHHhhhcCCC-CCcEEEecChHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADE-------GLPELRDALVKKLNQENKLY-KSSVMVTAGANQ 100 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-------~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~ 100 (398)
++++.|+.+... +.|+.+++++.+.+.... ...+.... ...++|+.+++++ +.+ +++|++++|+|+
T Consensus 15 ~~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 15 DGTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAENIVWTRGTTE 89 (398)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChHH
Confidence 367888888766 357899999988774321 11121111 1234555555555 764 789999999999
Q ss_pred HHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 101 AFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 101 a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++.++.++ .++||+|++++++|++ +...++..|++++.+ +.+.+ +.+|++.+++.+++++ ++|++++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~~i~~~t--~lv~i~~ 165 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKL-PIGAD-LLPDIRQLPELLTPRT--RILALGQ 165 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHHhccCc--eEEEEEC
Confidence 999999988 4789999999999976 445668889999999 77654 4689999999998765 9999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
++||||.++| +++|+++|+++|+++++|++| ++...... ...+.++++.|.+|.+|++| +||++.+ +++
T Consensus 166 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~--~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~~ 235 (398)
T TIGR03392 166 MSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGPPDV--QALDIDFYAFSGHKLYGPTG--IGVLYGK---TEL 235 (398)
T ss_pred ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCCCCh--hhcCCCEEEEecccccCCCc--eEEEEEc---HHH
Confidence 9999999999 889999999999999999999 44322211 12234578889999888666 7999988 677
Q ss_pred HHHHHHhhc---------------------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 252 ATQLLKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 252 ~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
++.+..... ....+.+.+.+.++.++++... ..+++..++..+.++++.+.|++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~ 315 (398)
T TIGR03392 236 LEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGF 315 (398)
T ss_pred HhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 666532211 0123556666777777766411 224566677788889999999888665
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
.+..+..+.++++.++. .+..++...| .++||.+++|..|. .+++||+|++. .+++|++++++.|+++
T Consensus 316 ~~~~~~~~~i~~~~~~~--~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 316 RSFRCPGSSLLAFDFAG--VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred EEeCCCCCcEEEEEeCC--cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence 66544445566666653 3566777776 58999999998763 35799999998 8999999999999988
Q ss_pred HHHH
Q 015890 381 LEEL 384 (398)
Q Consensus 381 ~~~~ 384 (398)
++.+
T Consensus 393 ~~~~ 396 (398)
T TIGR03392 393 LELL 396 (398)
T ss_pred HHHh
Confidence 7753
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=3.7e-32 Score=248.84 Aligned_cols=302 Identities=16% Similarity=0.141 Sum_probs=227.4
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe---
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF--- 119 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~--- 119 (398)
..+|.+.++..+.+.. |+ |..++.+.+.+.+.+.+|.+++++++++|+++++..++.++.++||+|+++
T Consensus 33 ~~~~~~~~~~~~~~~~-----~~---g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d 104 (346)
T TIGR03576 33 AGGFKIDEEDLELLET-----YV---GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPE 104 (346)
T ss_pred CCChhHHHHHHHHHHH-----hc---CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 3578888888887655 21 345666777777777778888999999999999999999999999999975
Q ss_pred CCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
.|+|..+...++..|++++.+ .+++.++. . ++ +++|+++ +++++|.+++.+++++|+++|+++|++
T Consensus 105 ~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~--~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~ 170 (346)
T TIGR03576 105 KPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DG--TSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAI 170 (346)
T ss_pred CCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cC--ceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCE
Confidence 468888888899999876432 14454432 2 23 4788775 578999999999999999999999999
Q ss_pred EEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHH
Q 015890 200 LVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 275 (398)
Q Consensus 200 livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 275 (398)
+++||+| ... .+..... ..+..+++.|+||+ ++|+|+||++++ +++++.+......+.++.+++.++++.
T Consensus 171 livDEAy~~~~~~~~~~~~~~-~~~~divv~s~SKa--laG~r~G~v~~~---~~li~~l~~~~~~~~~s~~~~~~~aa~ 244 (346)
T TIGR03576 171 VLVDDASGARVRRLYGQPPAL-DLGADLVVTSTDKL--MDGPRGGLLAGR---KELVDKIKSVGEQFGLEAQAPLLAAVV 244 (346)
T ss_pred EEEECCccccccccCCCCCHH-HcCCcEEEeccchh--ccccceEEEEeC---HHHHHHHHHhhcCcccCccHHHHHHHH
Confidence 9999999 322 1221111 11234778899994 579999999999 889999988877666677888999999
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-C
Q 015890 276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-C 354 (398)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~ 354 (398)
++|+... .+...+.++++++.+.+.++.+ .+..++ ++|+|++++.. ++.+++.++++++||.++|+..|. .
T Consensus 245 ~aL~~~~--~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-~~f~~~~~~~~--~~~~~~~~ll~~~gV~v~~~~~f~~~ 316 (346)
T TIGR03576 245 RALEEFE--LSRIRDAFKRKEEVYLRLFDKL---NVERTP-TGFVIKGVEEE--KLIEIGLDLLRNYGIITITAVGMPGA 316 (346)
T ss_pred HHHhhcc--HHHHHHHHHHHHHHHHHHHHhC---CCCcCC-CeEEEEeCCCC--CHHHHHHHHHHhCCEEEeCCcccCCC
Confidence 9997522 2455666777777777777643 344444 66899998642 355777788889999999998773 4
Q ss_pred CCeEEEEecCCCHH---HHHHHHHHHHHHH
Q 015890 355 RGHLRISFGGLVED---DCKAAADRLRRGL 381 (398)
Q Consensus 355 ~~~iRi~~~~~~~~---~~~~~~~~l~~~~ 381 (398)
++++||+++. .++ +++.++++|++.+
T Consensus 317 ~~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 317 SKTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 7899999997 443 6888888887654
No 112
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=8.2e-32 Score=253.89 Aligned_cols=329 Identities=17% Similarity=0.144 Sum_probs=241.1
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCC---Cc----HHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADE---GL----PELRDALVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~----~~~~~~l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
+|+++++|+.|+. +++.+|++.+++.+++.+.. .+|+.+. |. .++++.+++++ +. +++++++|++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~~~~~ 108 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILYASCF 108 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEECchH
Confidence 7889999999984 77889999999999886532 3455554 65 56666777666 43 4677778999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGN 175 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~n 175 (398)
+|+..++.+++++||.|+++.|+|+++...++..+.+.+.+ + ..|++++++.+++ ++++++|++.+++|
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~-~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 181 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-A------NNDMADLEAQLKEARAAGARHRLIATDGVFS 181 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhhhcCCCceEEEEeCCcc
Confidence 99999999999999999999999999988888888776555 2 3588999998874 12358888888999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc------cccccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK------HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~------~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
|||.+.+ +++|+++|++||+++|+||+| +++.+.. ......+.+++++|+||+++ |+|+||++++
T Consensus 182 ~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~--- 253 (393)
T TIGR01822 182 MDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTAR--- 253 (393)
T ss_pred CCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeC---
Confidence 9999998 999999999999999999999 5543211 01111245688999999985 6799999998
Q ss_pred HHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890 249 EGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326 (398)
Q Consensus 249 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (398)
+++++.+...... ...+.++..+.++.++++.. +..++..++++++++++.+.|++.+. .+..+. +.++.+.++.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~ 330 (393)
T TIGR01822 254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEAAGF-DIKPAD-HPIIPVMLYD 330 (393)
T ss_pred HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCC
Confidence 7888877653322 22233455555566666532 22456677888889999998887654 444444 3445555443
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
. .+..+++..|+ ++||.+. +..|. ....+|++++. .+++++++++++|.++++++
T Consensus 331 ~-~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 331 A-VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred H-HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 2 24567888876 6799997 44332 22469999888 78999999999999887654
No 113
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=7.1e-32 Score=254.90 Aligned_cols=336 Identities=18% Similarity=0.113 Sum_probs=245.1
Q ss_pred HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
++|+++++|+.|. ++++++|.+.+++.+.+.+... ..|....|..++++.+++++.+.++.+ ++|++++| ++++.
T Consensus 39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~ 116 (397)
T PRK06939 39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANG 116 (397)
T ss_pred cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHH
Confidence 4789999999987 6777899999999988865321 122224577889999999999888754 66777777 68999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCcc
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~ 179 (398)
.++.+++++||.|++++|+|+++...++..|.+++.+ +. .|++.+++.++. .+++++|++.+.+|++|.
T Consensus 117 ~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~ 189 (397)
T PRK06939 117 GLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGD 189 (397)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCC
Confidence 9999999999999999999999998889999988777 43 378888888763 223577887778899999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC---cc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR---KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~---~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
..+ +++|.++|+++|+++|+||+| +++.+. .. .....+.+++++|+||+++ |+|+||++++ ++++
T Consensus 190 ~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~---~~~~ 261 (397)
T PRK06939 190 IAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR---KEVI 261 (397)
T ss_pred cCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---HHHH
Confidence 777 999999999999999999999 543221 11 1111235689999999994 5589999998 7888
Q ss_pred HHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890 253 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 330 (398)
Q Consensus 253 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
+.+....... ..+.+...++++.++++.. ....+.++++.++++.+.+.|++.+. .+..+.+++ +++.++.. .+
T Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~-~~~~~~~~-~~ 337 (397)
T PRK06939 262 DWLRQRSRPYLFSNSLAPAIVAASIKVLELL-EESDELRDRLWENARYFREGMTAAGF-TLGPGEHPI-IPVMLGDA-KL 337 (397)
T ss_pred HHHHHhCccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCE-EEEEECCH-HH
Confidence 8876543221 2222344455555555431 12246677888889999999988764 444455444 33344322 24
Q ss_pred hHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
..+++.+|+ ++||.+.++.+.. ..++||++++. .+++++++++++|.+++++.
T Consensus 338 ~~~~~~~L~-~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 338 AQEFADRLL-EEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHH-HCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 567888887 5699998654321 23689999977 78999999999999888764
No 114
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-32 Score=225.16 Aligned_cols=328 Identities=24% Similarity=0.354 Sum_probs=259.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
-|++++.++.+.++..|+|+-++- -..| +......++.+++.- -+..+++++++-|+-+.++++++
T Consensus 39 ~G~~iv~ld~~e~~ryPdP~q~ef---------k~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~iiR 104 (375)
T KOG0633|consen 39 LGRDIVKLDANENPRYPDPEQMEF---------KYVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDLIIR 104 (375)
T ss_pred cCCCceEeccccCCCCcCHHHccc---------cccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHHHHh
Confidence 367889999888888778876441 1234 333334444444433 36789999999999999999999
Q ss_pred HhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
..+.|| ++|+...|+|.-|..-+...+++++.+ |... +|+++.|.+.+.++....+|++++++|+||||.++..+++
T Consensus 105 ~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkv-pl~p-dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di 182 (375)
T KOG0633|consen 105 CVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKV-PLNP-DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDI 182 (375)
T ss_pred heecCCccceeecCCcceeEEEEeecCCceEEEe-cCCC-CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHH
Confidence 999999 899999999988888888889999999 7765 5889999999999977668999999999999999998888
Q ss_pred HHHHHHHHHcCCEEEEeeceeccCCCc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 187 KRISDLCKAAGSWLVVDNTYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~~~~~~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
.+|.+.-. |.++++||+|..|+|.. ....++++.+++.++||.||++|+|+|+-.++ ..+++-+.+... +
T Consensus 183 ~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~---~~ia~iln~~Ka--P 255 (375)
T KOG0633|consen 183 LKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP---LSIAEILNRAKA--P 255 (375)
T ss_pred HHHHhCCC--CcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc---HHHHHHHHhccC--C
Confidence 88887544 78999999996655532 23346899999999999999999999999999 788888888876 8
Q ss_pred CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccCCccEEEEeeCCCCC-CChHHHHHHHHH
Q 015890 264 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKH-LDDFEVVRWLAH 340 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~ 340 (398)
++.+.+...++.+++.. .-..++..+..+.+.+.++...|..+++. .+.++..++|+.+++.... .-+..+..+++.
T Consensus 256 YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at 335 (375)
T KOG0633|consen 256 YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDAT 335 (375)
T ss_pred ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHH
Confidence 88888888888888885 23678888999999999999999888763 4556666899999986432 124456667778
Q ss_pred hcCeEEecCC-CCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 341 RHGVVVIPGG-ACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 341 ~~gi~v~~g~-~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
.+||.|+--. -.+..|++||+++. +|+-+-+++.++++
T Consensus 336 ~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 336 KMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMKCLKQF 374 (375)
T ss_pred hcceEEEEcCCccccceeEEEEcCC--cccchHHHHHHHhh
Confidence 9999997533 23467899999996 45556666666654
No 115
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.5e-32 Score=258.01 Aligned_cols=336 Identities=16% Similarity=0.165 Sum_probs=249.7
Q ss_pred cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|++++||+.+. ..+..+|++.+++.+++.+... ..|++..+..++++++++++ +. ++.|++++|.+
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~~-~~~i~~s~G~~- 180 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----GT-PDSILYSYGLS- 180 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----CC-CCEEEECCHHH-
Confidence 678999999885 4666899999999999876321 13555566788888888887 32 46788888776
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---c----CCCC-eEEEEeC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T----KPTP-KLVSVVN 172 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~----~~~~-~~v~i~~ 172 (398)
++..++.+++++||.|++....|..+...++..|.+++.+ +.+ |.+.++..++ . .+.+ ++|+++.
T Consensus 181 a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~-~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~ 253 (481)
T PLN02822 181 TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYF-KHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEA 253 (481)
T ss_pred HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEE-CCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence 6899999999999999988887777777788888888888 432 3344444332 1 1123 6888888
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcc----ccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
+++++|.+.| +++|.++|++||+++|+||+| ++ ++ |... .....+.+++++|+||.+|.+| ||+++
T Consensus 254 i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g 327 (481)
T PLN02822 254 IYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTG 327 (481)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEc
Confidence 9999999999 899999999999999999999 33 22 3211 1111245688999999998888 99999
Q ss_pred cCCcHHHHHHHHHhhccCCCCcc--hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890 245 PSEVEGFATQLLKVQDNIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322 (398)
Q Consensus 245 ~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 322 (398)
+ +++++.++.......++.+ +..+.++.++|+..+. ..+..++++++++++++.|++..++.+..+.+++++++
T Consensus 328 ~---~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l 403 (481)
T PLN02822 328 S---ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFL 403 (481)
T ss_pred C---HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEE
Confidence 8 7888887755544455544 6667777778864222 25677889999999999998874446666666888888
Q ss_pred eCCCCC----CC---hHHHHHHHHHhcCeEEecCCC--CC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 323 RLPEKH----LD---DFEVVRWLAHRHGVVVIPGGA--CG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 323 ~~~~~~----~~---~~~~~~~ll~~~gi~v~~g~~--~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+++.. .+ ..+++++|++++||.+.++.. +. .+.++|++++. .+++++++++++|++++.++..
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 404 HLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred EeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 886421 01 357888888788999997743 32 24579999887 7999999999999999988753
No 116
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=2.5e-31 Score=247.99 Aligned_cols=325 Identities=17% Similarity=0.175 Sum_probs=233.5
Q ss_pred HcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCC----cHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890 27 RGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEG----LPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 27 ~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~~----~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
.+|++++||+.|.+ +.+.||++.+++.+++.+... ..|....+ ..++++.+++++ +. ++++++++|+
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~~-~~~i~~~~G~- 86 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK----GT-EAALLFSSGY- 86 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh----CC-CCEEEECchH-
Confidence 47899999999953 234569999999998864211 11212223 344556666655 42 5667777765
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS 177 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt 177 (398)
+++..++.+++++||+|+++.|+|..+...++..|.+++.+ +. +|++.+++.++.. ..+++|++.+++|+|
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 159 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRY-RH------NDVEHLERLLEKNRGERRKLIVTDGVFSMD 159 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-cC------CCHHHHHHHHHHcccCCCeEEEEeCCccCC
Confidence 66666778888999999999999999998899999988877 42 4889999998743 124888888999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCC--ccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGR--KHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~--~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
|...+ +++|.++|+++|+++|+||+| .. +... ... ....+++++++|+||+++++| ||++++ +
T Consensus 160 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~---~ 230 (360)
T TIGR00858 160 GDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS---Q 230 (360)
T ss_pred CCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC---H
Confidence 99988 899999999999999999999 32 3221 111 112357899999999998666 999988 7
Q ss_pred HHHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 250 GFATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 250 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
++++.+....... ..+.+...++++.++++. .....+..+++.++++++.+.|++++. .+..+ .++++|+.++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~~~~~~ 307 (360)
T TIGR00858 231 ALIDYLINRARTLIFSTALPPAVAAAALAALEL-IQEEPWRREKLLALIARLRAGLEALGF-TLMPS-CTPIVPVIIGDN 307 (360)
T ss_pred HHHHHHHHhCccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHcCC-ccCCC-CCCEEEEEeCCH
Confidence 7877775433222 223445555566667753 122356678888999999999988764 55544 478888888642
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
.+..++.++|+ ++||.+.++..+. ..+++|++++. .+.+++++++++|+
T Consensus 308 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 308 -ASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred -HHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 24567888775 7899999865543 24689999997 68999999988763
No 117
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-31 Score=250.63 Aligned_cols=337 Identities=15% Similarity=0.147 Sum_probs=241.1
Q ss_pred HcCCCeEEcCCcc--CCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. +.++. +|.+.+++.+++.... +.......+++..+++++.+..+ .+++++++|+++|+.
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG--MDKVFFCNSGAEANE 110 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC--CCEEEECCCcHHHHH
Confidence 4789999999875 44554 6999999999886531 11122336788888888887765 479999999999999
Q ss_pred HHHHHhccCC-------CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCCC----CCChHHHHHhhccCCCCeEEE
Q 015890 104 NIVLTLCDAG-------DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKTL----HPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 104 ~~~~~l~~~g-------d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~~----~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.+++.+...+ ++|++..++|+++.......+..... +.+.. .++ ..|++.+++.+.++ +++|+
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~vi 187 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITDK--TAAVM 187 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCCC--eEEEE
Confidence 9999775332 67999999999887655444322211 10211 121 22899999999654 59999
Q ss_pred EeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 170 i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
+++++||+| ..++++.+++|.++|+++|+++|+||+| +.+.+........+....+.++||.++ +|+|+||++++
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~-~G~rig~~~~~- 265 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG-GGVPIGAVLAK- 265 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh-CCcccEEEEEc-
Confidence 998899999 5889999999999999999999999999 655553222111111112347999998 99999999998
Q ss_pred CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890 247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324 (398)
Q Consensus 247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (398)
+++++.+.......+++.+++.++++.++|+.. .++.++..+.....++.+.+.+.+.+.+....+. ++++|+.+
T Consensus 266 --~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~i~~ 342 (396)
T PRK02627 266 --EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGL-GLMIGIEL 342 (396)
T ss_pred --HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccC-cEEEEEEe
Confidence 788887765545567788999999999998752 2333333444444455555555445443333343 78888888
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+. +..+++.+++ ++||.+.|+. .+++|++++. .+++++++++++|.++++++
T Consensus 343 ~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 343 DR---PAAEIVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred cC---cHHHHHHHHH-HCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 32 4678888886 6699999863 4789999864 68999999999999988764
No 118
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=3.1e-31 Score=250.44 Aligned_cols=347 Identities=14% Similarity=0.092 Sum_probs=246.9
Q ss_pred HHHHHHHHHHc---CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCC-CC
Q 015890 18 IMVQIQELVRG---AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKL-YK 89 (398)
Q Consensus 18 ~~~~~~~~~~~---g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~-~~ 89 (398)
.++..+...++ +.+++.|+.+.... +|+.+++++.+.+..... ..|.......+..+.+++.+.++++. ++
T Consensus 7 ~~r~~fp~~~~~~~~~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~ 85 (406)
T PRK09295 7 KVRADFPVLSREVNGLPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA 85 (406)
T ss_pred HHHhhCccccCcCCCCceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC
Confidence 34555555442 34678888877553 578899999887753211 11111111223333344444444466 57
Q ss_pred CcEEEecChHHHHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 90 SSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
++|++|+|+|++++.++.++ .++||+|+++.++|++ +...++..|++++.+ +.+.+ +.+|+++|++.+++
T Consensus 86 ~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~ 163 (406)
T PRK09295 86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPALFDE 163 (406)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCCCHHHHHHhcCC
Confidence 89999999999999998874 5789999999998865 445567789999998 77654 46899999999987
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
++ ++|++++++||||.++| +++|.++|+++|+++++|++| ++...... ...+.++++.|++|.+|++| +|
T Consensus 164 ~t--~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~~~~--~~~~~D~~~~s~~K~~gp~G--~G 234 (406)
T PRK09295 164 RT--RLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHPVDV--QALDCDFYVFSGHKLYGPTG--IG 234 (406)
T ss_pred Cc--EEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccccCc--hhcCCCEEEeehhhccCCCC--cE
Confidence 65 99999999999999999 899999999999999999999 55433222 22344588899999888666 79
Q ss_pred EEEccCCcHHHHHHHHHhh----------------------ccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHH
Q 015890 241 YIAYPSEVEGFATQLLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNRE 297 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 297 (398)
+++++ +++++.+.... .....+.+...+.++.++++...+ .+++..++.+++++
T Consensus 235 ~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 311 (406)
T PRK09295 235 ILYVK---EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMH 311 (406)
T ss_pred EEEEc---hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99988 56655442110 012336777788888888875222 34666778888899
Q ss_pred HHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCH
Q 015890 298 IIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVE 367 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~ 367 (398)
++.+.|++++++++..+. ....+.+.++. .+..++...| .++||.++.|+.|. .++.+|+|++. .++
T Consensus 312 ~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~ 388 (406)
T PRK09295 312 YALSQLESVPDLTLYGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH 388 (406)
T ss_pred HHHHHHhcCCCEEEeCCCCCceEEEEEECC--cCHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence 999999888765666542 13344555553 2466776655 68999999988663 24689999999 899
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 368 DDCKAAADRLRRGLE 382 (398)
Q Consensus 368 ~~~~~~~~~l~~~~~ 382 (398)
+|++++++.|++...
T Consensus 389 ~did~l~~~l~~i~~ 403 (406)
T PRK09295 389 EEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987643
No 119
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=3.5e-31 Score=251.37 Aligned_cols=336 Identities=16% Similarity=0.130 Sum_probs=244.7
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC----CCCCCC----CcHHHHHHHHHHHhhhcCCC-CCcEEEecChH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADE----GLPELRDALVKKLNQENKLY-KSSVMVTAGAN 99 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~----~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t 99 (398)
|++++.|+.+... ++|+.+++++.+.+...... .+.... ...++|+.+++++ +.+ +++|++++|+|
T Consensus 30 ~~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t 104 (424)
T PLN02855 30 GSKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNAT 104 (424)
T ss_pred CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHH
Confidence 4578999988765 56888999998876432111 111111 1235555555555 664 57999999999
Q ss_pred HHHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890 100 QAFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
++++.++.++ +++||+|+++.++|++ +...++..|++++.+ +.+.++ .+|++.+++.+++++ ++|+++
T Consensus 105 ~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v-~~~~~~-~~~~~~l~~~i~~~t--~lv~i~ 180 (424)
T PLN02855 105 EAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFV-GLTPDE-VLDVEQLKELLSEKT--KLVATH 180 (424)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEE-ecCCCC-CcCHHHHHHHhccCc--eEEEEe
Confidence 9999998863 5789999999998865 444567789999988 776544 479999999998754 999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+++||||.++| +++|+++|+++|+++++|++| ++..... ....+.+++++|++|.+|++| +|+++++ ++
T Consensus 181 ~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g~~~~~--~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~ 250 (424)
T PLN02855 181 HVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVPHMPVD--VQTLGADFLVASSHKMCGPTG--IGFLWGK---SD 250 (424)
T ss_pred CccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCcCCC--chhcCCCEEEeecccccCCCc--cEEEEEc---hh
Confidence 99999999999 889999999999999999999 5543322 222334578999999887555 7999988 56
Q ss_pred HHHHHHHhh---------------------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 251 FATQLLKVQ---------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 251 ~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+++.+.... .....+.+.....++.++++... ..+++..++..+.++++++.|+++++
T Consensus 251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 665553221 01123456666777777776422 24567778888889999999988766
Q ss_pred CccccCC------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHH
Q 015890 309 GAVKGGE------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA 373 (398)
Q Consensus 309 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~ 373 (398)
++++.+. .+.++.+.++. .+..++...|.+++||.++.|..|. .++++|+|++. .+++|++++
T Consensus 331 ~~i~~~~~~~~~~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l 408 (424)
T PLN02855 331 VRIYGPKPSEGVGRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF 408 (424)
T ss_pred EEEeCCCcccccCcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence 5666432 13566667663 2466788877544499999988652 24689999998 899999999
Q ss_pred HHHHHHHHHHHh
Q 015890 374 ADRLRRGLEELV 385 (398)
Q Consensus 374 ~~~l~~~~~~~~ 385 (398)
++.|+++++.+.
T Consensus 409 ~~~l~~~~~~~~ 420 (424)
T PLN02855 409 IHALKDTIAFFS 420 (424)
T ss_pred HHHHHHHHHHHH
Confidence 999999887753
No 120
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=5e-31 Score=249.28 Aligned_cols=334 Identities=20% Similarity=0.189 Sum_probs=241.7
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC--C--CCCCC----CCcHHHHHHHHHHHhhhcCCC-CCcEEEecChH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI--S--KYGAD----EGLPELRDALVKKLNQENKLY-KSSVMVTAGAN 99 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~--~y~~~----~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t 99 (398)
|++++.|+.+... ++|+.+.+++.+.+..... + .+... ....++|+.+++++ +.+ +++|++++|++
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t 90 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT 90 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence 5678999998876 4578899999887643210 0 11111 12335555555555 776 67999999999
Q ss_pred HHHHHHHHHh----ccCCCEEEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890 100 QAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
++++.++.++ .++||+|+++.+.|++. ...++..|++++.+ +.+++ +.+|++.+++.+++++ ++|+++
T Consensus 91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~--~lv~~~ 166 (403)
T TIGR01979 91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI-PLDDD-GTLDLDDLEKLLTEKT--KLVAIT 166 (403)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE-ecCCC-CCCCHHHHHHHhccCC--eEEEEE
Confidence 9999998875 57899999999988763 34556789999988 77744 4689999999998765 999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+++||||..+| +++|.++|+++|+++|+|++| .+...... ...+.++++.|++|.+|++| +|+++++ ++
T Consensus 167 ~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~--~~~~~d~~~~s~~K~~gp~G--~g~l~~~---~~ 236 (403)
T TIGR01979 167 HVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMPVDV--QALDCDFYVFSGHKMYGPTG--IGVLYGK---EE 236 (403)
T ss_pred cccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccccCc--cccCCCEEEEecccccCCCC--ceEEEEc---hH
Confidence 99999999999 899999999999999999999 54322211 22345688999999988666 7999888 56
Q ss_pred HHHHHHHhhc---------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 251 FATQLLKVQD---------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 251 ~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+++.+..... ....+.+...+.++.++++...+ ..++..++..+.++.+.+.|+.+++
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g 316 (403)
T TIGR01979 237 LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPG 316 (403)
T ss_pred HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6665432110 01124556666666666654222 2466778888889999999988766
Q ss_pred CccccCCc----cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHH
Q 015890 309 GAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD 375 (398)
Q Consensus 309 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~ 375 (398)
++++.+.. +.++.+.++. .+..++.+.| +++||.+++|..| +.++++|||++. .+++|++++++
T Consensus 317 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~ 393 (403)
T TIGR01979 317 LRIYGPRDAEDRGGIISFNVEG--VHPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVE 393 (403)
T ss_pred EEEeCCCCccccCceEEEEeCC--cCHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHH
Confidence 66665431 4455566653 2456676655 6899999987643 346799999997 78999999999
Q ss_pred HHHHHHHHH
Q 015890 376 RLRRGLEEL 384 (398)
Q Consensus 376 ~l~~~~~~~ 384 (398)
.|+++++.+
T Consensus 394 ~l~~~~~~~ 402 (403)
T TIGR01979 394 ALKKVRKFF 402 (403)
T ss_pred HHHHHHHHh
Confidence 999877664
No 121
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-30 Score=240.35 Aligned_cols=346 Identities=19% Similarity=0.153 Sum_probs=261.9
Q ss_pred HHHHHHHHHc--CCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-Cc
Q 015890 19 MVQIQELVRG--AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYK-SS 91 (398)
Q Consensus 19 ~~~~~~~~~~--g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~ 91 (398)
+++.++.+.+ +++++.|+.+.... .|..+++++.+.+.. .....|.......+..+..++.++++.+.++ ++
T Consensus 8 ~r~~fp~l~~~~~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~e 86 (405)
T COG0520 8 VRADFPALKREVGKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDE 86 (405)
T ss_pred HHhhCHHHhhccCCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 5555555555 56889999887766 699999999987742 1122333333334444555555555558884 89
Q ss_pred EEEecChHHHHHHHHHHh---ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890 92 VMVTAGANQAFVNIVLTL---CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l---~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~ 164 (398)
|++|+|+|++++.+..++ .++||+|++..-.|++ |....+..|++++.+ |.+++ ..++.|.++..+++++
T Consensus 87 Ivft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i-~~~~~-g~~~~~~~~~~i~~~T- 163 (405)
T COG0520 87 IVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVI-PLDDD-GLLDLDALEKLITPKT- 163 (405)
T ss_pred EEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCc-
Confidence 999999999999999999 5899999999999965 666777789999999 88744 5789999999999887
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccccc-ccCCCcceeEEE
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSK-AYGMMGWRVGYI 242 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~G~r~G~i 242 (398)
|+|.+++.+|.||.+.| +++|+++|+++|+++++|.++ .++..... ...+-+++.+|.+| .+|+.| +|.+
T Consensus 164 -klvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~~idv--~~l~~Df~afsgHKwl~gP~G--iGvL 235 (405)
T COG0520 164 -KLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHLPIDV--QELGCDFLAFSGHKWLLGPTG--IGVL 235 (405)
T ss_pred -eEEEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCccCCCc--hhcCCCEEEEcccccccCCCc--eEEE
Confidence 99999999999999999 999999999999999999999 66644333 23345588999999 445335 7999
Q ss_pred EccCCcHHHHHHHHHhhc----------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHH
Q 015890 243 AYPSEVEGFATQLLKVQD----------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREII 299 (398)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l 299 (398)
+++ +++.+.+.+... ....+++.....++.++++...+ .+++..++.+++.+++
T Consensus 236 y~r---~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~ 312 (405)
T COG0520 236 YVR---KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL 312 (405)
T ss_pred EEc---hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999 777777633211 11234556666666666665222 2567777888889999
Q ss_pred HHHhccCCCCccccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecC-CCH
Q 015890 300 REALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGG-LVE 367 (398)
Q Consensus 300 ~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~-~~~ 367 (398)
.+.|++++.++++++. ....+.+.++. ....++...|. ++||.++.|..|.. +..+|+|++. .++
T Consensus 313 ~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~--~~~~dv~~~L~-~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~ 389 (405)
T COG0520 313 LEGLSELPGVEIYGPPDADRGGIVSFNVKG--IHPHDVATLLD-EKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE 389 (405)
T ss_pred HHHHhcCCCeEEecCCcccCceEEEEEeCC--CCHHHHHHHHH-hCCeEEEeccccccHHHHhcCCCCceEEEEeecCCH
Confidence 9999999988888765 34555666654 35788888774 78899999988853 3459999999 899
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 368 DDCKAAADRLRRGLE 382 (398)
Q Consensus 368 ~~~~~~~~~l~~~~~ 382 (398)
+|++++++.|+++.+
T Consensus 390 edid~l~~aL~~~~~ 404 (405)
T COG0520 390 EDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 122
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.2e-30 Score=245.31 Aligned_cols=334 Identities=19% Similarity=0.165 Sum_probs=245.1
Q ss_pred HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|++++||+.++ ++++++|.+.+++.+++.... ...|....|..++++.+++++++.++. ++.+++++| ++++.
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG-~~a~~ 107 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSG-FNTNQ 107 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHH
Confidence 4689999999986 677789999999998876422 345666778899999999999988775 356777666 57788
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~ 181 (398)
.++.+++++||.|+++.|.|..+...+...|.++..+ + .+|++++++.++.. +.+++|++.+++||||.+.
T Consensus 108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~ 180 (385)
T TIGR01825 108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIY-K------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA 180 (385)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc
Confidence 8888999999999999999998887778888877665 2 35788888877632 1258888888899999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
+ +++|.++|++||+++|+||+| .. +. +.. ......+.++++.|+||.+|++| ||++.+ +++++.
T Consensus 181 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~---~~~~~~ 251 (385)
T TIGR01825 181 P---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH---KELIEY 251 (385)
T ss_pred C---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC---HHHHHH
Confidence 9 899999999999999999999 32 32 211 11122567899999999997665 999988 788887
Q ss_pred HHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 255 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 255 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+......+ ....+++.+.++.++++...+. .+..+++.++++++.+.|++.+. .+..+. +.++.+.++.. .+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~-~~~~ 327 (385)
T TIGR01825 252 LKNRARPFLFSTAQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGKLGY-DTGGSE-TPITPVVIGDE-KAAQ 327 (385)
T ss_pred HHHhCccccccCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEECCH-HHHH
Confidence 76543211 2234566677777777642121 24556667788888888887754 555555 34555554421 1356
Q ss_pred HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+++..|+ ++||.+++..... ...+||++++. .+++++++++++|++++++
T Consensus 328 ~~~~~L~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 328 EFSRRLF-DEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHH-HCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 7888887 5699986433322 23689999875 7999999999999998865
No 123
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=2.1e-30 Score=241.10 Aligned_cols=321 Identities=19% Similarity=0.159 Sum_probs=233.1
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
+.+.|+.+++++.+.+.. +.| + ...++.+.+.+.+++.+|+++ +.+++++|+++++..++.+++++||+|+++
T Consensus 7 ~~~~~~~v~~a~~~~~~~---~~~-~--~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~ 80 (356)
T cd06451 7 PSNVPPRVLKAMNRPMLG---HRS-P--EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVG 80 (356)
T ss_pred CcCCCHHHHHHhCCCccC---CCC-H--HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEe
Confidence 556789999999765422 222 2 334556666666666668754 457888988999999999999999999999
Q ss_pred CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
.++|++ +...++..|++++.+ +.+++ +.+|++++++.+++.+ +++|++++++||+|.+.| +++|.++|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~-~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~ 154 (356)
T cd06451 81 VNGVFGDRWADMAERYGADVDVV-EKPWG-EAVSPEEIAEALEQHD-IKAVTLTHNETSTGVLNP---LEGIGALAKKHD 154 (356)
T ss_pred cCCchhHHHHHHHHHhCCCeEEe-ecCCC-CCCCHHHHHHHHhccC-CCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence 998876 456778899999998 77654 4789999999998622 599999999999999999 888999999999
Q ss_pred CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH---hhc-------------
Q 015890 198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK---VQD------------- 260 (398)
Q Consensus 198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~---~~~------------- 260 (398)
+++++|++| ++...... ...+.++++.|.+|+++.| .++||++.+ +++++.+.. ...
T Consensus 155 ~~li~D~~~~~g~~~~~~--~~~~~d~~~~s~~K~l~~p-~g~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T cd06451 155 ALLIVDAVSSLGGEPFRM--DEWGVDVAYTGSQKALGAP-PGLGPIAFS---ERALERIKKKTKPKGFYFDLLLLLKYWG 228 (356)
T ss_pred CEEEEeeehhccCccccc--cccCccEEEecCchhccCC-CCcceeEEC---HHHHHHHHhcCCCCceeecHHHHHhhhc
Confidence 999999998 54322211 1223346778999999743 468999998 677766653 000
Q ss_pred ---cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCCCCChHH
Q 015890 261 ---NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 261 ---~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 333 (398)
....+++...+.++.++++. ....+++..++..++++++.+.|...+. .+..++ .+.++++.++.. .+..+
T Consensus 229 ~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 306 (356)
T cd06451 229 EGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL-KLLAKPELRSPTVTAVLVPEG-VDGDE 306 (356)
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCCceEEEECCCC-CCHHH
Confidence 12233455555666666654 1234567777888888999999987754 444321 234456666543 36778
Q ss_pred HHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+++.|.+++||.+.+|..+..+++||++++. .+++|+++++++|++++
T Consensus 307 ~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 307 VVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 8888864349999998766556799999987 68999999999998865
No 124
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.8e-30 Score=243.03 Aligned_cols=330 Identities=16% Similarity=0.121 Sum_probs=236.0
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|++++||..|.+ ++.++|++++++.+.+.... ...|....+...+++.+++.+.+.++. ++ .++++++++++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~-~i~~~~g~~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ER-ALLFSSGYAANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-Cc-EEEECcHHHHHHH
Confidence 7899999999864 34568999999999886521 112222334455566666666665563 44 4445556678777
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCH
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~ 183 (398)
++..++++||.|+++.|.|+.+...++..|.+++.+ +. .|++.+++.++.. ...+++++.+++|++|...+
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~- 186 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRY-PH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP- 186 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC-
Confidence 888889999999999999999988888889888877 43 3788999998753 12466777788999999888
Q ss_pred HHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+++|+++|+++|+++|+||+| .. +. +... .....++++++.|+||.+|.+| ||++.+ +++.+.+
T Consensus 187 --l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~---~~~~~~~ 258 (385)
T PRK05958 187 --LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS---ETLIDYL 258 (385)
T ss_pred --HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC---HHHHHHH
Confidence 999999999999999999999 43 22 2111 1112456788999999998666 898888 7777776
Q ss_pred HHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 256 LKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 256 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
...... ...+.++..++++.++++..... .+..+++.++++++.+.|+..+. .+..+. +.++++.++.. .+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~ 334 (385)
T PRK05958 259 INRARPFIFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRALGF-QLMDSQ-SAIQPLIVGDN-ERALA 334 (385)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHHH
Confidence 543221 12334555555666677642221 45667788888899999887764 555555 66777887642 24567
Q ss_pred HHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
++++|. ++||.+.++..+. .++++||+++. .+++++++++++|+++
T Consensus 335 ~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 335 LAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 888875 7899998854332 24689999986 6899999999999875
No 125
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=2.6e-30 Score=240.83 Aligned_cols=349 Identities=13% Similarity=0.116 Sum_probs=254.4
Q ss_pred HHHHHHHcCCCeEEcCCccC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 21 QIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 21 ~~~~~~~~g~~~~~l~~g~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
+.+++.+.|.+.+.|..+++ ++..+. .+.+++.+++..+. ..|..+.+..+++++++++++ .++++++
T Consensus 2 r~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g------~~~vv~t 74 (431)
T cd00617 2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG------FKHIIPT 74 (431)
T ss_pred hHHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC------CCeEEEc
Confidence 34566788999999999998 665443 55555555555443 459999999999999999984 3579999
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC---------CCCCChHHHHHhhccC--CC
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PT 164 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~e~l~~~l~~~--~~ 164 (398)
+|+++|+..++.+++++||.| ++.|.|..+...+...|.+++.+ +.++. .+.+|++.|++.++++ ..
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v-~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDL-VIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEE-ecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 999999999999999999987 68899989988899999999998 77532 2349999999999865 22
Q ss_pred CeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec---c-----CCCccccccCCcEEEEcccccccCC
Q 015890 165 PKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM---Y-----DGRKHCCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 165 ~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~---~-----~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (398)
+++|+++.|+||+ |..++.+++++|.++|++||+++|.|+++ +. + ++...... .+.++.++|++|.+.+
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si-~ei~~e~~s~sd~~~m 231 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI-AEIAREMFSYADGCTM 231 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-HHHHHHhhccCCEEEE
Confidence 5889999999998 99999999999999999999999999997 21 2 12111111 0112334566666666
Q ss_pred Ccce------eEEEEccCCcHHHHHHHHHhh----ccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 235 MGWR------VGYIAYPSEVEGFATQLLKVQ----DNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 235 ~G~r------~G~i~~~~~~~~~~~~l~~~~----~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+|++ .||+++++ ++++++++... ... ..+.+....++++.+|+...+ .+..+...++++++.+.|
T Consensus 232 S~~K~~~~~~GG~i~~~d--~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L 307 (431)
T cd00617 232 SAKKDGLVNIGGFLALRD--DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVEQVRYLGDRL 307 (431)
T ss_pred EeecCCCCccceEEEeCc--HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence 6665 57999985 56888876432 111 122344444554446654211 123333344568899999
Q ss_pred ccCCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEec-CCC-CC-----------CCCeEEEEec
Q 015890 304 SPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIP-GGA-CG-----------CRGHLRISFG 363 (398)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~-g~~-~~-----------~~~~iRi~~~ 363 (398)
++.|. .+..|.+++++|++.+... -++.+++.+|+++.||.+.. |+. ++ ....+|+++.
T Consensus 308 ~~~G~-~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p 386 (431)
T cd00617 308 DEAGV-PIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP 386 (431)
T ss_pred HHCCC-CccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc
Confidence 98876 7777888999999976421 14788898999999999754 331 11 1268999988
Q ss_pred C--CCHHHHHHHHHHHHHHHHHH
Q 015890 364 G--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 364 ~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
+ -+.++++...+.|...+++-
T Consensus 387 rr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 387 RRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred ccccCHHHHHHHHHHHHHHHhhH
Confidence 7 68899999999999888763
No 126
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=6.8e-31 Score=246.40 Aligned_cols=336 Identities=15% Similarity=0.100 Sum_probs=240.9
Q ss_pred EEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 33 VSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
+.|+.+... ++|+.+++++.+.+.... ...|.......++.+.+.+.+.+.++.++++|++++|+++++..++.++
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 456666544 358899999988775321 1111111112334555555555556888899999999999999998887
Q ss_pred c----cCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890 110 C----DAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 110 ~----~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~ 182 (398)
. ++|+.|+++..+|+++. ..++..|.++..+ +.+++ +.+|+++|++.+++++ ++|++++|+||||.++|
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEI-PVDKS-GLIRLVDLERAITPDT--VLASIQHANSEIGTIQP 156 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEE-eeCCC-CCCCHHHHHHhcCCCC--EEEEEECCcCCcEeehh
Confidence 5 56899999987776544 3457779999988 77654 4689999999998665 89999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH-HHHHH----
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLL---- 256 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-~~~l~---- 256 (398)
+++|.++|+++|+++|+|+++ ++..+. .....+.++++.|++|.+|++| +|+++.++ ++ ...+.
T Consensus 157 ---~~~I~~l~~~~~~~vivD~~~~~g~~~~--~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~~~ 226 (381)
T PRK02948 157 ---IAEIGALLKKYNVLFHSDCVQTFGKLPI--DVFEMGIDSLSVSAHKIYGPKG--VGAVYINP---QVRWKPVFPGTT 226 (381)
T ss_pred ---HHHHHHHHHHcCCEEEEEChhhcccccc--CcccCCCCEEEecHHhcCCCCc--EEEEEEcC---CCCCCCcccCCC
Confidence 889999999999999999877 654322 2223456688999999998777 68887774 22 11111
Q ss_pred HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE-----EEEeeCCCCCCCh
Q 015890 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI-----YLWARLPEKHLDD 331 (398)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 331 (398)
.......++.+.+++.++.++++...+++++..+++.++++++.+.|++++. .+......+ .+.+.++. .+.
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~i~~~~~~~--~~~ 303 (381)
T PRK02948 227 HEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPL-PIEVEGHSTSCLPHIIGVTIKG--IEG 303 (381)
T ss_pred CCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEeCCCccCcCCEEEEEeCC--CCH
Confidence 0111245688999999999999863356778888999999999999998865 333211111 22223332 245
Q ss_pred HHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.++...| .++||.+++|+.|.. .+++|+|++. .+++|++++++.|+++++.+.++
T Consensus 304 ~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 378 (381)
T PRK02948 304 QYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYRG 378 (381)
T ss_pred HHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 6677766 588999999886421 3689999998 79999999999999998876654
No 127
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.2e-30 Score=243.31 Aligned_cols=336 Identities=14% Similarity=0.173 Sum_probs=232.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ..++ .+|++.+++.+++.+.. ..+. ....+....+++.+.+..+ .+++++++|+++|++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~ 102 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLW--HVSN-LYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcC--cccc-ccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHH
Confidence 5788999998753 3332 58999999999987521 1111 1123344556666655433 468999999999999
Q ss_pred HHHHHhc----cCCC----EEEEeCCCCcChhhHHHhcCcEEEEe---ccCCCCCCC----CChHHHHHhhccCCCCeEE
Q 015890 104 NIVLTLC----DAGD----SVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSKTLH----PDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 104 ~~~~~l~----~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~---~~~~~~~~~----~d~e~l~~~l~~~~~~~~v 168 (398)
.+++++. .+|| +|++.+++|+++...+...+...... .+.. .++. .|++.+++.++++ +++|
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~~av 179 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITPN--TAAI 179 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCCC--eEEE
Confidence 9998873 4555 89999999999887665554332221 0111 1122 5899999999764 5999
Q ss_pred EEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 169 SVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 169 ~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
+++.++|++| ..++.+++++|.++|++||+++|+||+| +.+.+........+....+.|+||.++ +|+|+||++++
T Consensus 180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~ 258 (389)
T PRK01278 180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG-GGFPLGACLAT 258 (389)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc-CCcceEEEEEc
Confidence 9998889998 6889999999999999999999999999 655553222111111122458999998 89999999999
Q ss_pred CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEEEEe
Q 015890 246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIYLWA 322 (398)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~ 322 (398)
+++++.+.......+++.+++.++++.++|+... +..+...+.....++++.+..++.+ .+....+. +.++++
T Consensus 259 ---~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~-G~~~~i 334 (389)
T PRK01278 259 ---EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGK-GLLLGL 334 (389)
T ss_pred ---HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecc-cEEEEE
Confidence 6788877666666677889999999988887421 2222222222222333333333333 22233343 677777
Q ss_pred eCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+.. +..+++.+|+ ++||.+.|+. .+++||+++. .+++++++++++|.+++.+
T Consensus 335 ~~~~---~~~~~~~~l~-~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 335 KCVV---PNRDLVQALR-DEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEec---CHHHHHHHHH-HCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 7753 4678888887 6699999873 5799999765 7899999999999998865
No 128
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=1e-30 Score=240.78 Aligned_cols=314 Identities=16% Similarity=0.173 Sum_probs=227.1
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD 111 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~ 111 (398)
++||+.+.++. ++|.+++++.+.... ...|++.+...++++++++++ |++ .+++++|+++++..++.+++.
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~----g~~--~~~v~~~g~~a~~~~l~~~~~ 71 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS----GKE--AALFLPTGTQANLVALLSHCE 71 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh----CCC--eEEEeCchHHHHHHHHHHhcC
Confidence 47899998888 799999999875544 456878888899999999986 543 346777788889888888899
Q ss_pred CCCEEEEeCCCCcC-hhhH-HHhcC-cEEEEeccCCCCCCCCChHHHHHhhccCC----CCeEEEEeCCCCCCccCCCHH
Q 015890 112 AGDSVVMFAPYYFN-SYMS-FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----~~~~v~i~~p~nptG~~~~~~ 184 (398)
+||+|+++.|+|.. +... ....| .+++.+ +.++ ++.+|+++|+++++++. ++++|++++|+ +|.+++.+
T Consensus 72 ~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~ 147 (333)
T PRK10534 72 RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPI-DAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPRE 147 (333)
T ss_pred CCCeeEEechhhhhHhcCCchHHhcCceEEee-cCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHH
Confidence 99999999888743 3221 23444 677777 6653 46889999999986521 25899999765 59999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc-ccC-CcEEEEcccccccCCCcceeE-EEEccCCcHHHHHHHHH
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC-VEG-DHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLK 257 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~-~~~-~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~l~~ 257 (398)
++++|+++|+++++++++||+| +.. .+..... ... +++ +.|+||.+|++ +| |++++ +++++.+..
T Consensus 148 ~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~--~~s~SK~~~~~---~G~~~~~~---~~~i~~~~~ 219 (333)
T PRK10534 148 YLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSF--TICLSKGLGTP---VGSLLVGN---RDYIKRARR 219 (333)
T ss_pred HHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEE--EEEeEcCCCCc---ccceEEcC---HHHHHHHHH
Confidence 9999999999999999999998 321 1211111 112 333 34899998754 67 67777 889998887
Q ss_pred hhccCCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890 258 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 258 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
....+..+ .+.+.++++..+++. ..+..+...+.++++.+.|+++|. .+..+. ++|++++++. .+..++.
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~nfv~~~~~~--~~~~~~~ 291 (333)
T PRK10534 220 WRKMTGGGMRQAGILAAAGLYALKH----NVARLQEDHDNAAWLAEQLREAGA-DVMRQD-TNMLFVRVGE--EQAAALG 291 (333)
T ss_pred HHHHhCCchhhHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHhCCC-ccCCCC-ceEEEEECCc--hhHHHHH
Confidence 76543322 334556666666643 123344455567889999988865 666664 9999999873 1345665
Q ss_pred HHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 336 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+ +++++||.++++. ++|++.+. .+.+++++++++|.+++
T Consensus 292 ~-~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 292 E-YMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred H-HHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 5 5568999998863 58998764 68999999999998655
No 129
>PLN02721 threonine aldolase
Probab=100.00 E-value=2.8e-30 Score=240.16 Aligned_cols=327 Identities=19% Similarity=0.248 Sum_probs=227.3
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
.+++|+.+.++. +++.+.+++.+.........| ++...+++++++++++ . +.+++++++++++..++.+++
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~----~--~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFG----K--EAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhC----C--ceeEEecCccHHHHHHHHHHc
Confidence 467899998886 688999998764222222333 3336889999999884 3 235666667778878888877
Q ss_pred c-CCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-----CCCeEEEEeC-CCCCCccC
Q 015890 111 D-AGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVN-PGNPSGTY 180 (398)
Q Consensus 111 ~-~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~-p~nptG~~ 180 (398)
+ +||+|++++|+|..... .+...|++++.+ +.+++ +.+|+|.+++.+++. +.+++|++++ ++||+|.+
T Consensus 77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~ 154 (353)
T PLN02721 77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTV-KNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRC 154 (353)
T ss_pred cCCCCeEEEcCccceehhcccchhhhcCceeEec-CCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCcc
Confidence 7 99999999999865554 567789999988 76644 568999999999731 2358999976 57899999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQL 255 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l 255 (398)
++.+++++|.++|+++|+++|+|++| +.. .+............++.|+||+++. ++|+ ++.+ +++++.+
T Consensus 155 ~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~---~~~~~~~ 228 (353)
T PLN02721 155 LSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGS---KSFIRKA 228 (353)
T ss_pred ccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecC---HHHHHhH
Confidence 99999999999999999999999998 321 1221111111223445689999963 3465 5566 7888877
Q ss_pred HHhhccCCCCcchHHHHHH--HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCC-CCCh
Q 015890 256 LKVQDNIPICASIISQHLA--LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK-HLDD 331 (398)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~ 331 (398)
.........+.+...+.++ ...++ .+.++ .++..++++.+.+.|++++++.+ ..+..++++|++++.. ..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (353)
T PLN02721 229 KRLRKTLGGGMRQVGVLAAAALVALQ---ENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA 304 (353)
T ss_pred HHHHHhcCCCeehhHHHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence 6655433333332222222 22232 22332 33445667888899988765433 3333477889888642 1256
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+++++|. ++||.++++. ++++|++++. .+++++++++++|++++..
T Consensus 305 ~~~~~~L~-~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 305 EKLCKSLE-EHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHH-hCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 77888885 8999999973 6799999985 7899999999999987654
No 130
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-30 Score=232.49 Aligned_cols=329 Identities=18% Similarity=0.179 Sum_probs=247.8
Q ss_pred CCcHHHHHHHHHhhcCC-----CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh--c----c
Q 015890 43 QPPKMAMEKVKELVWDP-----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL--C----D 111 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~-----~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l--~----~ 111 (398)
++.|+++++|...+... +.+.|+. ....+-+..++.+.+..|+++++|+||+|+|+++++++... . +
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~--~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~ 89 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGR--EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQ 89 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHH--HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhccc
Confidence 45899999998887652 1222221 11223333334444444899999999999999999999973 2 2
Q ss_pred CCCEEEEeCCCCcChhhHHHhc---CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMT---GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
.|..|+++.-.|+.....++.+ |+++.++ +++.+| .+|+|+|+++|++++ .+|.|.+.||.+|+++| +++
T Consensus 90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl-~V~~~G-~v~~e~L~~al~~~T--~LVSim~aNnE~G~IQp---I~e 162 (386)
T COG1104 90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYL-PVDSNG-LVDLEQLEEALRPDT--ILVSIMHANNETGTIQP---IAE 162 (386)
T ss_pred CCCeEEEcccccHHHHHHHHHHHhcCCeEEEe-CCCCCC-eEcHHHHHHhcCCCc--eEEEEEecccCeeeccc---HHH
Confidence 4689999999999888777666 9999999 888876 689999999999886 89999999999999999 999
Q ss_pred HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcH--HHHHHHHHhhccCCCC
Q 015890 189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE--GFATQLLKVQDNIPIC 265 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~--~~~~~l~~~~~~~~~~ 265 (398)
|.++|+++|+++++|.++ ++.-...... .+.++...|.||..|+.| +|+++.+++.+ .++-.-.+.+.....+
T Consensus 163 i~~i~k~~~i~fHvDAvQa~Gkipi~~~~--~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGT 238 (386)
T COG1104 163 IGEICKERGILFHVDAVQAVGKIPIDLEE--LGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGT 238 (386)
T ss_pred HHHHHHHcCCeEEEehhhhcCceeccccc--cCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCC
Confidence 999999999999999999 6653322222 234577889999999888 68877664211 1111112233345678
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC-CCCccccC---CccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
.|.+.++++.++++...+.++....++...++++.+.|.+. +.+.+.+. .-.+.+.+.++. .+.+.+...| +.
T Consensus 239 env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g--v~gE~ll~~L-~~ 315 (386)
T COG1104 239 ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG--VEGESLLLAL-DL 315 (386)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC--CcHHHHHHhc-cc
Confidence 89999999999998755667888889999999999999875 55344332 224566667764 3566666655 68
Q ss_pred cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+||++..|+.|.. .+.||||++. .+++|++.+++.|.++++.+++-
T Consensus 316 ~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 316 AGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred cCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999999953 2689999999 89999999999999999988754
No 131
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=3e-30 Score=243.57 Aligned_cols=328 Identities=16% Similarity=0.075 Sum_probs=233.5
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
.+.|+.+.+.. +|+.+++++.+.+.... ...|....+..+..+.+.+.+.+.++.++++|++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 67888776554 58899999988875421 123543334444555555556665677777899999999999888777
Q ss_pred h---ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 109 L---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 109 l---~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
+ .++||+|+++.++|++.. ..++..|++++.+ +.+++++.+|++++++.+++++ ++|++++|+||||.+.
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWA-RVDEATGELHPDDLASLLSPRT--RLVAVTAASNTLGSIV 173 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEE-eccccCCCcCHHHHHHhcCCCc--eEEEEeCCCCCCCccC
Confidence 5 578999999999997643 4457789999988 7765446789999999998765 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~ 260 (398)
+ +++|.++|+++|+++++|+++ .+... ......+.+++++|++|++| .++|+++++ +++++.+.....
T Consensus 174 ~---~~~i~~~~~~~~~~~ivD~a~~~~~~~--~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~---~~~~~~l~~~~~ 242 (397)
T TIGR01976 174 D---LAAITELVHAAGALVVVDAVHYAPHGL--IDVQATGADFLTCSAYKFFG---PHMGILWGR---PELLMNLPPYKL 242 (397)
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhccccC--CCHHHcCCCEEEEechhhcC---CceEEEEEc---HHHHhhCCCccc
Confidence 9 999999999999999999999 43221 11222344577789999985 358999988 677766543321
Q ss_pred c----------CCCCcchHHHHHHHHHhcC----Cc-----------hHHHHHHHHHHHHHHHHHHHhccCCCCccccC-
Q 015890 261 N----------IPICASIISQHLALYSLQT----GP-----------EWVTERVKDLVRNREIIREALSPLGEGAVKGG- 314 (398)
Q Consensus 261 ~----------~~~~~~~~~~~~~~~~l~~----~~-----------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~- 314 (398)
. ...+.+.....++..+++. +. ..+++..++..+.++++++.|++++.+++..+
T Consensus 243 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 322 (397)
T TIGR01976 243 TFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVA 322 (397)
T ss_pred cCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 1 1123444444444444432 10 02456667777888899999988875566543
Q ss_pred ---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------CCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 315 ---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------CRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 315 ---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
..++++.+.++. .+..++.++| .++||.++.+..|. ..++||||++. .+++|++++++.|
T Consensus 323 ~~~~~~~~~~~~~~~--~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 323 RLAARVPTVSFTVHG--LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CccCCCceEEEEeCC--cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 135566666653 2466788877 58899999886653 24689999988 7889999888764
No 132
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=100.00 E-value=4.6e-30 Score=237.27 Aligned_cols=314 Identities=20% Similarity=0.172 Sum_probs=224.5
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
+++++||.+++++.+..... ..|++.....++++.+++++ + ++++++++|+++++..++.+++++||+|+++
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred cCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 56778999999998865432 35656665666666666665 5 5678888888899999999999999999999
Q ss_pred CCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 120 APYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 120 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
.|+|..... ..+..|++++.+ +.+. +.+|++.+++++++. .++++|++++|+|| |.+++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPV-PGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEee-cCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999976442 345689999888 6543 468999999999752 13599999999997 66679999999999
Q ss_pred HHHHcCCEEEEeece-ec---cCCCccccccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhcc--CCC
Q 015890 192 LCKAAGSWLVVDNTY-FM---YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN--IPI 264 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~--~~~ 264 (398)
+|+++|+++|+||+| .. ..+........+..+++.|+||+++++| |+ ++.+ +++++.+...... .++
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---g~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV---GAVVVGN---RDFIARARRRRKQAGGGM 227 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc---ceEEECC---HHHHHHHHHHHHHhCCCh
Confidence 999999999999998 22 1222111111223366889999998776 54 4566 7888887765432 233
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH--Hhc
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA--HRH 342 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~ 342 (398)
+.+.+.+.++..+|+. ..+ .+..+++.++++++.+.|++++. .+..+. ++++.+.++........+.+++. .++
T Consensus 228 ~~~~~~~~a~~~~L~~-~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 303 (338)
T cd06502 228 RQSGFLAAAGLAALEN-DLW-LRRLRHDHEMARRLAEALEELGG-LESEVQ-TNIVLLDPVEANAVFVELSKEAIERRGE 303 (338)
T ss_pred hhHHHHHHHHHHHhcC-chH-HHHHHHHHHHHHHHHHHHHhcCC-Cccccc-CCeEEEecCCccHHHHHHHHHHHHhhhC
Confidence 4566777777777764 233 45557777788899999988876 555454 77777776532111122222222 157
Q ss_pred CeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 343 gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
|+.+.+.. .++|||+++. .++++++++++++++
T Consensus 304 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 304 GVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 99997753 3889999987 689999999998864
No 133
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=8.7e-30 Score=236.52 Aligned_cols=328 Identities=20% Similarity=0.185 Sum_probs=232.6
Q ss_pred CeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 31 NAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 31 ~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+++|+.++ -..+.||++++++.+.+.+.. ...|....+..+..+.+.+.+.++++.+ +.++++++++++..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE--AALVFSSGYAANDGVLS 79 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHH
Confidence 578888765 344557999999999987521 1122222344555556666666555653 34556667789998889
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC---CCCeEEEEeCCCCCCccCCCHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~v~i~~p~nptG~~~~~~ 184 (398)
+++++||+|+++.|+|+++...++..|++++.+ +. +|.+.+++.+++. .+++++++++++||||...+
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~-- 150 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIF-KH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP-- 150 (349)
T ss_pred HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEe-cC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC--
Confidence 999999999999999999888888899988877 42 3778888888742 23588888899999999988
Q ss_pred HHHHHHHHHHHcCCEEEEeece-eccCC---Cc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMYDG---RK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~~~---~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++|+++|+++|+++|+|++| ++..+ .. ......+.+++++|+||.++.+| ||++.+ +++.+.+..
T Consensus 151 -~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---~~~~~~~~~ 223 (349)
T cd06454 151 -LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---KELIDYLRS 223 (349)
T ss_pred -HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---HHHHHHHHH
Confidence 899999999999999999999 43221 11 11122356788999999998655 899888 677776654
Q ss_pred hhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890 258 VQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 258 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
.... ...+.+...++++.++++.... ..+..+++.++++.+.+.|.+.+. .+..+.++.+.++.++.. .+..++.
T Consensus 224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 300 (349)
T cd06454 224 YARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKELGF-PVGGSPSHIIPPLIGDDP-AKAVAFS 300 (349)
T ss_pred hchhhhccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCcEEEEeCCCh-HHHHHHH
Confidence 3322 2234566677777777765222 456677888889999998887764 444444344444444321 2467788
Q ss_pred HHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 336 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.|+ ++||.+.++.... ..+++|++++. .+++++++++++|+++
T Consensus 301 ~~L~-~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 301 DALL-ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHH-hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 8876 6699998864321 24789999987 7899999999999763
No 134
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-30 Score=243.71 Aligned_cols=338 Identities=16% Similarity=0.094 Sum_probs=236.6
Q ss_pred HcCCCeEEcCCc--cCCCCC-cHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHH
Q 015890 27 RGAKNAVSLAQG--VVYWQP-PKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~~-~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~ 100 (398)
.+|++++||..| .+.++. +|.+.+++.+++.+.. ...|... ....+++++.+.++.+ ++++++++|+++
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~-----~~~~la~~l~~~~~~~~~~~v~~~~sgse 114 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE-----PQIALAERLVELLGAPEGGRVFFCNSGAE 114 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCH-----HHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence 368899999886 345555 7999999999887532 1234222 2245555565555543 478999999999
Q ss_pred HHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC-CC--CCChHHHHHhhccCCCCeEEEEeCC
Q 015890 101 AFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK-TL--HPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 101 a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~-~~--~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
++..+++.+...| ++|+..+++|+++...+... |..... +.+.... .. ..|++.+++.+.++ +++|+++++
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~aviiep~ 192 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDD--TAAVFLEPI 192 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCC--eEEEEEecc
Confidence 9999999877666 57888888998876544322 211110 0011000 00 13789999988643 599999999
Q ss_pred CCCCccCCCHH-HHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 174 GNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 174 ~nptG~~~~~~-~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+||+|.+++++ ++++|.++|++||+++|+||+| +++.|........+....+.++||.++ +|+|+|+++.+ ++
T Consensus 193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~-~G~~ig~~~~~---~~ 268 (398)
T PRK03244 193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLG-GGLPIGACLAF---GP 268 (398)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhh-CCcccEEEEEc---HH
Confidence 99999988655 5999999999999999999999 665553221111111111348899998 89999999999 77
Q ss_pred HHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--CccccCCccEEEEeeCCCCC
Q 015890 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLWARLPEKH 328 (398)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~ 328 (398)
+++.+.......+++.+++.++++.++|+... -.+..++.+++.+++.+.|++++. +....+ .++++++.++..
T Consensus 269 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~~~i~~~~~- 344 (398)
T PRK03244 269 AADLLTPGLHGSTFGGNPVACAAALAVLDTIA--SEGLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLLLGIVLTAP- 344 (398)
T ss_pred HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEEEEEEEecc-
Confidence 88877654455677889999999999987411 123445666667778888876532 122223 488899998642
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
....+.+++. ++||.+.+. .++.||++++. .+++|+++++++|.++++++.
T Consensus 345 -~~~~~~~~l~-~~Gv~~~~~----~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 -VAKAVEAAAR-EAGFLVNAV----APDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred -HHHHHHHHHH-HCCeEEeec----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 3566777775 789999874 25789999887 789999999999999997643
No 135
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.98 E-value=1.2e-29 Score=239.89 Aligned_cols=338 Identities=19% Similarity=0.158 Sum_probs=236.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.++.++|..+.+.. +|.+++++.+.+... +...|....+..++++..++.+++.++.+..+|+++ |+++++
T Consensus 18 ~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-sgt~a~ 94 (402)
T cd00378 18 QRETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-SGSQAN 94 (402)
T ss_pred HHhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-CcHHHH
Confidence 36688888776664 799999998765321 122344455567777777777878888876556555 467999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhH-----HHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMS-----FQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
..++.+++++||+|+++.|+|.++... ++..|.++..+ +.+.+ ++.+|++.+++.+.... ++++++++++|
T Consensus 95 ~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~id~~~l~~~i~~~~-~~~v~~~~~~~ 172 (402)
T cd00378 95 LAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESV-PYGVDPETGLIDYDALEKMALEFK-PKLIVAGASAY 172 (402)
T ss_pred HHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEe-cCCcCcccCCcCHHHHHHHHHhCC-CCEEEecCccc
Confidence 999999999999999999999766433 56678776666 55433 57899999999996332 58999888877
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
| ...+ +++|+++|+++|+++|+|++| .+ +.+....... ...++++|+||++ +|+|+||++.++ ++++
T Consensus 173 ~--~~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l--~G~~gg~i~~~~--~~~~ 242 (402)
T cd00378 173 P--RPID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL--RGPRGGLILTRK--GELA 242 (402)
T ss_pred C--CCcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCC--CCCCceEEEecc--HHHH
Confidence 5 4556 899999999999999999997 32 3332122122 2347899999987 688899999884 4788
Q ss_pred HHHHHhhccCCCC-cchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCC
Q 015890 253 TQLLKVQDNIPIC-ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHL 329 (398)
Q Consensus 253 ~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~ 329 (398)
+.+.........+ .+...+.++..++.... ....+..+++.++++++.+.|++.+. .+. .+.+++++|+.++....
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~v~v~~~~~~~ 321 (402)
T cd00378 243 KKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGF-KVVSGGTDNHLVLVDLRPKGI 321 (402)
T ss_pred HHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC-eEeecCCCCeEEEEeCCccCC
Confidence 8876654322222 23334444344443212 25667778889999999999988765 444 45668999999974333
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCC------CCCeEEEEecCC-----CHHHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGGL-----VEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~~~-----~~~~~~~~~~~l~~~~~~ 383 (398)
+...+.+ +++++||.+.+..... .+.++|++++.. +++|++.+++.|.+++++
T Consensus 322 ~~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 322 TGKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CHHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 4445555 5578999998643221 346899997662 478888888888876654
No 136
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.98 E-value=6.2e-30 Score=241.82 Aligned_cols=330 Identities=15% Similarity=0.094 Sum_probs=231.6
Q ss_pred CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
|++.++|+.++ .+++.+|.+++++.+++..... ..|+......++++.+++++ |. ++.+++++| +++
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~sG-~~a 118 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTSG-YVS 118 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECcH-HHH
Confidence 46688888865 6777899999999988765321 11222223456666666665 53 455665555 688
Q ss_pred HHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCC
Q 015890 102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPS 177 (398)
Q Consensus 102 ~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~npt 177 (398)
+..++..+.. +|+.|+++...|..+...++..|.++..+ +.+ |.+.+++.++. ...+++|++++|+|||
T Consensus 119 ~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~-~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~t 191 (410)
T PRK13392 119 NDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVF-RHN------DLADLEEQLASVDPDRPKLIAFESVYSMD 191 (410)
T ss_pred HHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence 8888887753 78888888778877777788889887666 321 45556665541 1235899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc-C--CCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY-D--GRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~-~--~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
|.+.+ +++|.++|+++|+++|+||+| ++. . +.... ......+++++|+||+||++| ||++++ ++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~---~~ 262 (410)
T PRK13392 192 GDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS---AD 262 (410)
T ss_pred ccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC---HH
Confidence 99999 899999999999999999999 333 2 21111 011122478899999998877 899887 78
Q ss_pred HHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890 251 FATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 328 (398)
Q Consensus 251 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (398)
+++.+......+ +.+.+++.++++.++|+.. .......+.+.++++++.+.|++.+. .+..+. ++++.+.++..
T Consensus 263 ~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~~- 338 (410)
T PRK13392 263 LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-KTSQTERDAHQDRVAALKAKLNANGI-PVMPSP-SHIVPVMVGDP- 338 (410)
T ss_pred HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence 888777665432 3345567788888888752 22234556778888999999988765 555555 55555555421
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+..++.++|++++||.++++.... ...++|++++. .+++|+++++++|.++++++
T Consensus 339 ~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 339 TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 1345788888767899999875432 23689999976 68999999999999887764
No 137
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.98 E-value=1e-29 Score=236.82 Aligned_cols=317 Identities=17% Similarity=0.199 Sum_probs=219.4
Q ss_pred CcHHHHHHHHHhhcCCCCCCCC---CC----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEE
Q 015890 44 PPKMAMEKVKELVWDPSISKYG---AD----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~---~~----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~V 116 (398)
......+++.+.-.......+. .. +...++++.+++++ |.+ .+.+++|+++++..++.++.++||+|
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~V 93 (370)
T TIGR02539 20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWV 93 (370)
T ss_pred CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEE
Confidence 5677777777764321111110 11 12344555565555 654 56678999999999999999999999
Q ss_pred EEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 117 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
+++.++|++....++..|++++.+ +.+. .++.+|+++|++.++.. ..+++|++++|+||+|...+ +++|.
T Consensus 94 l~~~~~h~s~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~ 169 (370)
T TIGR02539 94 VLDGLAHYTSYVAAERAGLNVKEV-PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVA 169 (370)
T ss_pred EECCcccHHHHHHHHHcCCEEEEE-ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHH
Confidence 999999877777889999999988 6543 34678999999998631 13689999999999999999 88999
Q ss_pred HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC-----
Q 015890 191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI----- 264 (398)
Q Consensus 191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~----- 264 (398)
++|+++|+++|+|++| ++..+. .....+..++++|+||+++ +|.|+||++++ +++++.+......+..
T Consensus 170 ~la~~~~~~livDea~~~g~~~~--~~~~~~~di~v~s~sK~~~-~~g~~G~l~~~---~~~i~~l~~~~~~~~~~~~~~ 243 (370)
T TIGR02539 170 KVCREKGVPLLLNCAYTVGRMPV--SAKEIGADFIVGSGHKSMA-ASGPCGVLGMS---EEWEDIVLRKSRYSPVKEVEL 243 (370)
T ss_pred HHHHHcCCeEEEECccccCCcCC--CHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhhcccccCCccceeee
Confidence 9999999999999999 542121 1112234577899999998 56689999998 7888887665432221
Q ss_pred ---CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc--ccCCccEEEEeeCCCCC-------CChH
Q 015890 265 ---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEKH-------LDDF 332 (398)
Q Consensus 265 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~ 332 (398)
+.....+.++.++++...+++.+..+.+ ++++++++.|++++. .+ ..+..++|++++++... .+..
T Consensus 244 ~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~-~~~~~l~~~L~~~g~-~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~ 321 (370)
T TIGR02539 244 LGCTSRGAPIVTMMASFPHVVERVKRWDEEV-KKTRWFVAELEDIGF-IQLGQKPKEHDLVKFETPGFHEIAQKHKRRGY 321 (370)
T ss_pred ecccccccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCc-EEEccCCCcCceEEEECCchhHHhhhhccccH
Confidence 1112244444555543223344333333 335689999998875 43 23445888888876310 1233
Q ss_pred HHHHHHHHhcCeE-EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 333 ~~~~~ll~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+.+.| .++||. ++++ .++++|+++...+.+++++++++|++.+++
T Consensus 322 ~~~~~L-~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 322 FLYEEL-KKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHH-HhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 466666 588997 6543 367999997345899999999999988765
No 138
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.98 E-value=1.5e-29 Score=237.75 Aligned_cols=327 Identities=17% Similarity=0.104 Sum_probs=249.3
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
.|...++++++++.+.+ ..| .+.+..++++.+++.++++++.+. +.+++++++|++++.++..+.++||+|++
T Consensus 16 GP~~~~~~V~~a~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv 89 (401)
T PLN02409 16 GPVNIPERVLRAMNRPN-----EDH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVS 89 (401)
T ss_pred CCCCCCHHHHHHhcCCC-----CCC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEE
Confidence 35567889998886643 223 356778899999999999888865 56888999999999999999999999999
Q ss_pred eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHHHHHHHHHH--
Q 015890 119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPERLLKRISDL-- 192 (398)
Q Consensus 119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~l-- 192 (398)
+.++|++. ...++..|++++.+ +.+.++ .+|++.+++.+++. +++++|++++++||||.++| +++|.++
T Consensus 90 ~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~-~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---~~~i~~l~~ 164 (401)
T PLN02409 90 FRIGQFSLLWIDQMQRLNFDVDVV-ESPWGQ-GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---LAGVRKLLD 164 (401)
T ss_pred eCCCchhHHHHHHHHHcCCceEEE-ECCCCC-CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC---HHHHHHHHh
Confidence 99999765 46778889999988 766433 47999999999862 13699999999999999999 5555555
Q ss_pred HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh------------
Q 015890 193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------------ 259 (398)
Q Consensus 193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~------------ 259 (398)
|+++|+++|+|+++ ++. .+......+.++++.|.+|+++.| .++||++.+ +++++++....
T Consensus 165 ~~~~g~~~vvD~v~s~g~--~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T PLN02409 165 CAQHPALLLVDGVSSIGA--LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCAS---PKALEASKTAKSPRVFFDWADYL 238 (401)
T ss_pred hhccCcEEEEEcccccCC--ccccccccCccEEEEcCccccCcC-CCcceeEEC---HHHHHHHhcCCCCCeecCHHHHH
Confidence 99999999999999 543 222222234457788889999633 368999998 67777664321
Q ss_pred ------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCCCCC
Q 015890 260 ------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKH 328 (398)
Q Consensus 260 ------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~ 328 (398)
....++++.+.+.++.++++.. ...+++..++++++++++++.|+..+. ++..+. .....++.++++
T Consensus 239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~-~~~~~~~~~~s~~v~~~~~p~~- 316 (401)
T PLN02409 239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL-KLCTKKPEWRSDTVTAVVVPEG- 316 (401)
T ss_pred HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcccceEEEeCCCC-
Confidence 0114477778888888888752 234677888899999999999987765 544332 123456677654
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+..++...+++++||.+.+|......+.|||+... .+.+++..++.+|.+++.++.
T Consensus 317 ~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 317 IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 366788888888999999998765457899999887 899999999999999998865
No 139
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.98 E-value=4.2e-30 Score=244.02 Aligned_cols=340 Identities=17% Similarity=0.170 Sum_probs=237.5
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..| ...++ .+|.+.+++.+++... ..|....+..+....+++.+.+.++.+.+++++++|+++|+.
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~ 110 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE 110 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 478999999987 44555 7899999999998652 344333345667777777777777777889999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCC-----CCCCChHHHHHhhccC-
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSK-----TLHPDADWLEKTLETK- 162 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~-----~~~~d~e~l~~~l~~~- 162 (398)
.+++.+. .++++|++.+++|+++.......+ .+++.+ +.++. .+..|++.|++.++..
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~ 189 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHV-PYPYRYRPPAELADDLEALEEALEEHP 189 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEe-CCCccccchhhHHHHHHHHHHHHhcCC
Confidence 9999874 567999999999999765443322 123444 33311 1334889999998752
Q ss_pred CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee
Q 015890 163 PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV 239 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (398)
..+++++++..++++|.++ +.+++++|.++|++||+++|+||+| ++..+........+....+.|+||.++ +|+|+
T Consensus 190 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~ 268 (413)
T cd00610 190 EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPL 268 (413)
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEccccc-Ccccc
Confidence 2256777776678889865 6778999999999999999999999 544443211111111223458899998 58999
Q ss_pred EEEEccCCcHHHHHHH--HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890 240 GYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG 313 (398)
Q Consensus 240 G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~ 313 (398)
||++++ +++++.+ .......+++.++..++++.++++.... .+..++++++.+++.+.|+.. +.+....
T Consensus 269 g~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 343 (413)
T cd00610 269 GAVLGR---EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVR 343 (413)
T ss_pred EEEEEc---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEee
Confidence 999988 7888875 3333445677788888888888764211 234455566666666655543 2211122
Q ss_pred CCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+. +.++++.++... .....+.+.|. ++||.+.|+. .+.+|++++. .+++++++++++|.+++
T Consensus 344 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 344 GR-GLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred cC-ceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 33 677888775431 23456777665 8899999974 6789999887 68999999999998753
No 140
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.98 E-value=2.1e-29 Score=236.29 Aligned_cols=333 Identities=16% Similarity=0.183 Sum_probs=240.1
Q ss_pred cCCccCCCCCcHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHHHHHH
Q 015890 35 LAQGVVYWQPPKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 35 l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~~~~~ 108 (398)
|+.+... ++++.+++++.+.+.+.. .+.| +......++++++++.... +. ++++|++|+|++++++.++.+
T Consensus 3 ld~aa~~-~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~-~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 3 LDNNATT-MLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGI-NARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred ccCcCCC-CCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHc-CcCCCCeEEEeCCHHHHHHHHHHH
Confidence 4444333 357889999988775421 1122 2234566777777766433 44 678999999999999999987
Q ss_pred hc-----cC-CCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 109 LC-----DA-GDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 109 l~-----~~-gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
+. ++ +++|+++...|+++.. .++..|++++.+ +.+++ +.+|++.+++.+++++ +++++++|+||||.
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v-~~~~~-g~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~ 155 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL-PINEQ-GTITAEQVREAITEKT--ALVSVMWANNETGM 155 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE-ecCCC-CCCCHHHHHHhcccCC--eEEEEEcccCCCcc
Confidence 62 45 4689999877766543 356689999999 87755 4689999999998765 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH---
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL--- 255 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l--- 255 (398)
++| +++|.++|+++|+++++|+++ ++.... .....+.++++.|.+|++|++| +|+++.++.. .+...+
T Consensus 156 ~~~---~~~I~~la~~~g~~~ivD~a~~~g~~~~--~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~p~~~g~ 227 (382)
T TIGR03403 156 IFP---IKEIGEICKERGVLFHTDAVQAIGKIPV--DVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELTPLFHGG 227 (382)
T ss_pred ccC---HHHHHHHHHHcCCEEEEechhhcCCCcc--CccccCCCEEEEcchhhCCCCc--eEEEEECCCC-CCCCcccCC
Confidence 999 889999999999999999998 543222 2222334488899999988777 4777766421 110001
Q ss_pred HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChH
Q 015890 256 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDF 332 (398)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 332 (398)
........++++.+.+.++..+++...++++...++++++++++.+.|++++++.+..+.. ++++.+.++. .+..
T Consensus 228 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 305 (382)
T TIGR03403 228 EHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG--VEGE 305 (382)
T ss_pred CCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC--CCHH
Confidence 0011123567888888888888875345567777888999999999998887767765431 3455566642 3567
Q ss_pred HHHHHHHHhcCeEEecCCCCC-------------------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 333 EVVRWLAHRHGVVVIPGGACG-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
++...| .++||.++.|+.|. ..+.||+|++. .+++|++++++.|+++++++.
T Consensus 306 ~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 306 AMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 777775 58899999887662 12579999999 899999999999999888754
No 141
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=2.5e-29 Score=235.92 Aligned_cols=327 Identities=16% Similarity=0.188 Sum_probs=230.5
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
.+|+.++||..| .++++ .+|.+.+++.+++.+... ..| + .+....+++.+.+.++. +++++++|++++
T Consensus 24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~----~~~~~~l~~~la~~~g~--~~~~~~~sg~~a 96 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLY-Y----TEPQEELAEKLVEHSGA--DRVFFCNSGAEA 96 (379)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccccc-C----CHHHHHHHHHHHhhCCC--CEEEEeCCcHHH
Confidence 468899999986 34554 459999999998875321 122 2 34555666666666664 489999999999
Q ss_pred HHHHHHHhc---c----CCCEEEEeCCCCcChhhHHHhcCcEEEE----eccCCCC-CCC--CChHHHHHhhccCCCCeE
Q 015890 102 FVNIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMTGVTHIL----VGPCSSK-TLH--PDADWLEKTLETKPTPKL 167 (398)
Q Consensus 102 ~~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~-~~~--~d~e~l~~~l~~~~~~~~ 167 (398)
+..+++.+. . ++|+|+++.|+|+++...+...+..... . +...+ .+. .|++.+++.++++ +++
T Consensus 97 ~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~--~~~ 173 (379)
T TIGR00707 97 NEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFE-PLVPGFSYAPYNDIESLKKAIDDE--TAA 173 (379)
T ss_pred HHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCC-CCCCCceeeCCCCHHHHHHHhhhC--eeE
Confidence 999998663 2 3799999999999888766655543321 1 22111 111 1899999998765 489
Q ss_pred EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc-CCcEEEEcccccccCCCcceeEE
Q 015890 168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGY 241 (398)
Q Consensus 168 v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~-~~~~i~~~s~sK~~~~~G~r~G~ 241 (398)
|++++++|++|.. ++.+++++|.++|+++|+++|+||+| +.+.+.... ... .++ + .++||.++ +|+|+||
T Consensus 174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d-~--~t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPD-I--ITLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCC-E--EEEccccc-CCcccEE
Confidence 9998777778864 68999999999999999999999999 655443211 111 122 2 37899999 9999999
Q ss_pred EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC---CccccCCccE
Q 015890 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAI 318 (398)
Q Consensus 242 i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~ 318 (398)
++.+ +++++.+........++.+++.++++.++|+... ..+..++++++++.+++.|++.+. .....+ .++
T Consensus 250 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~ 323 (379)
T TIGR00707 250 TLAK---EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--KERLLENVKEKGDYFKERLEELGKNYPNKEVRG-KGL 323 (379)
T ss_pred EEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcccc-Cce
Confidence 9998 7888888765445567788999999998887421 123445555566666655544321 111223 478
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
++++.++. +..++.+.| .++||.+.|+. .+++|++++. .+++++++++++|++++
T Consensus 324 ~~~~~~~~---~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 324 MLGIELEA---PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEEEEecC---cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 88888864 356777776 58999999853 5789999876 78999999999998753
No 142
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=8.3e-29 Score=230.40 Aligned_cols=320 Identities=17% Similarity=0.154 Sum_probs=222.1
Q ss_pred CCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCC
Q 015890 41 YWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAG 113 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~g 113 (398)
+-+..+++++++.+........ .... .+...++++.+++++ |+ +++++++|+++++..++.+++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~g 83 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEKG 83 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCCC
Confidence 3456789999998877432111 1111 133456666666665 65 789999999999999999999999
Q ss_pred CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 114 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
|+|+++.++|++....++..|++++.+ +.+.+ .+.+|++.+++.+++. ..+++|++++|+||||...+ ++
T Consensus 84 d~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~ 159 (361)
T cd06452 84 DWVVVDGLAHYTSYVAAERAGLNVREV-PNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AK 159 (361)
T ss_pred CEEEEcCCcchHHHHHHHhcCCEEEEE-ecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HH
Confidence 999999999988877889999999999 77654 3678999999988631 23699999999999999888 89
Q ss_pred HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----
Q 015890 188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---- 262 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~---- 262 (398)
+|.++|+++|+++|+|++| ++... ......+.+++++|+||+++ ++.|+||++++ +++++.+......+
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~~--~~~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~---~~~~~~l~~~~~~~~~~~ 233 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRMP--VSGKELGADFIVGSGHKSMA-ASAPIGVLATT---EEWADIVFRTSQMFKIKE 233 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCcC--CCHHHcCCCEEEecCCcccc-CCCCeEEEEEC---HHHHHHHhccccccccce
Confidence 9999999999999999999 43211 22222345689999999997 55699999998 78888876544321
Q ss_pred ----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEEeeCCCC-------CC
Q 015890 263 ----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEK-------HL 329 (398)
Q Consensus 263 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-------~~ 329 (398)
..+.+...+.++.++++...+.+++ ..+..++++++++.|+++++++++. +...+++.++.+.. ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~ 312 (361)
T cd06452 234 VELLGCTLRGAPLVTLMASFPHVKERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKR 312 (361)
T ss_pred eeeeccccCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccc
Confidence 1111122233333444321222322 3333445578899999885556652 23356776666521 11
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
...++.++|+ ++||.+.. .+..+++|++....++++++.++++|+++.
T Consensus 313 ~~~~~~~~L~-~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 313 RGYFLYSELK-KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred cchhHHHHHH-HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 2336788775 78998532 234568999984357899999999887543
No 143
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=1.1e-28 Score=232.97 Aligned_cols=328 Identities=19% Similarity=0.176 Sum_probs=230.6
Q ss_pred cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-----CCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-----ISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-----~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
.|..+++|+.++ -++..+|++++++.+++.+.. ...|. ......++++.+++++ +. +.+++++|+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~ 125 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA 125 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence 456688888765 455578999999999886421 11111 1123455666666665 54 45688999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
|+..+++++..+||.|++..++|......++..|.+++.+ + ..|++++++.+++.+ +++|++++++||||.+
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~-~~lV~v~~v~n~tG~i 197 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPF-R------HNDVDHLRRQIERHG-PGIIVVDSVYSTTGTI 197 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEe-c------CCCHHHHHHHHHhcC-CeEEEECCCCCCCCcc
Confidence 9999999999999999999999988888888888887665 2 248999999997643 4889999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Cccc-cc--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKHC-CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
+| +++|.++|+++|+++|+||+| ++..+ .... .. ....++++.|+||++|. |+|+++++ +++++
T Consensus 198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~---~~~~~ 268 (407)
T PRK07179 198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG---RAGIITCP---RELAE 268 (407)
T ss_pred cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc---cCeEEEeC---HHHHH
Confidence 99 889999999999999999999 54322 1111 11 11225888999999962 58999988 67777
Q ss_pred HHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890 254 QLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 254 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
.+..... ....+.++...+++.++++.. ....+..++++++++++.+.|++++. .+. +. ++++++.++.. .+.
T Consensus 269 ~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~-~~i~~l~~~~~-~~~ 343 (407)
T PRK07179 269 YVPFVSYPAIFSSTLLPHEIAGLEATLEVI-ESADDRRARLHANARFLREGLSELGY-NIR-SE-SQIIALETGSE-RNT 343 (407)
T ss_pred HHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CC-CCEEEEEeCCH-HHH
Confidence 6654332 123344445445555555531 22345667888889999999988754 554 33 56777776432 123
Q ss_pred HHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
..+...| .++||.+....... ..+.+||+++. .+++|+++++++|.+++.+.
T Consensus 344 ~~~~~~L-~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 344 EVLRDAL-EERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHH-HHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 4555555 58899854221111 24789999998 79999999999999888764
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=9e-29 Score=233.41 Aligned_cols=331 Identities=17% Similarity=0.133 Sum_probs=230.6
Q ss_pred cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|+++++|+.++ -++..+|++++++.+++.+.... .|+..+...++++.+++++ +. +..++++++++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~----g~--~~~l~~~sG~~ 116 (402)
T TIGR01821 43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH----GK--ESALVFTSGYV 116 (402)
T ss_pred CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh----CC--CeEEEECchHH
Confidence 347789998876 56678999999999988663211 1112222345555555554 53 34566666789
Q ss_pred HHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCC
Q 015890 101 AFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNP 176 (398)
Q Consensus 101 a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~np 176 (398)
++..++..+.. +++.|+.....|......++..|.++..+ +. .|.+++++.++.. ..+++|++++|+||
T Consensus 117 an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~ 189 (402)
T TIGR01821 117 ANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIF-RH------NDVAHLEKLLQSVDPNRPKIIAFESVYSM 189 (402)
T ss_pred HHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCC
Confidence 99999988865 66666666556666666677778776655 32 2677788877621 12589999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Ccccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
+|.+.| +++|.++|+++|+++|+||+| ++.-+ ..... ...+.+++++|+||++|.+| ||++++ +
T Consensus 190 ~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~---~ 260 (402)
T TIGR01821 190 DGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS---R 260 (402)
T ss_pred CCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC---H
Confidence 999999 899999999999999999999 44322 11110 11224688899999998777 899888 7
Q ss_pred HHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 250 GFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 250 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
++++.+...... ++.+.++..++++.++|+..... ....+...++++++.+.|++++. .+..+. ++++.+.++..
T Consensus 261 ~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~i~~~~~ 337 (402)
T TIGR01821 261 KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEALGI-PVIPNP-SHIVPVIIGDA 337 (402)
T ss_pred HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH
Confidence 888887654432 23456777788888888752222 34445566788888998888765 555555 55666655421
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
....++.++|++++||.+++...+. ...++||+++. .+++|+++++++|+++++++
T Consensus 338 -~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 338 -ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred -HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1345777877766799998865432 23689999987 79999999999999988764
No 145
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=1.1e-28 Score=235.79 Aligned_cols=334 Identities=16% Similarity=0.162 Sum_probs=232.4
Q ss_pred CCCeEEcCCcc-CCC-----CCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 29 AKNAVSLAQGV-VYW-----QPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 29 g~~~~~l~~g~-~~~-----~~~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+++.+||+..+ -++ .+++.+.+++.+.-.. .....|+......++++.++++++ .++.+++++ +..
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-----~~~ai~~~~-G~~ 172 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-----KPAAIVFGM-GYA 172 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-----CCcEEEECC-HHH
Confidence 46678887654 222 2345666666654322 112336667778888888888884 245566655 457
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-------C---CCCeEEEE
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-------K---PTPKLVSV 170 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-------~---~~~~~v~i 170 (398)
++..++.+++++||.|++++++|.++...++..|++++.+ +.+ |++++++.++. + +..+++++
T Consensus 173 an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~-~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~liv 245 (489)
T PLN02483 173 TNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVF-QHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVI 245 (489)
T ss_pred HHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhhhhccccccccCCceEEEE
Confidence 7778888999999999999999999999999999999888 532 45566655531 1 11254554
Q ss_pred e-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Ccc----ccccCCcEEEEcccccccCCCcceeEE
Q 015890 171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKH----CCVEGDHVVNLFSFSKAYGMMGWRVGY 241 (398)
Q Consensus 171 ~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~ 241 (398)
+ ...|++|.+.+ +++|+++|+++|+++|+||+| ++..+ ... .....+.+++++|+||++|+.| ||
T Consensus 246 ve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~ 319 (489)
T PLN02483 246 VEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GY 319 (489)
T ss_pred ECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eE
Confidence 4 55699999998 999999999999999999999 44322 111 1112356799999999998776 99
Q ss_pred EEccCCcHHHHHHHHHhhccC--CCCcchHHHHHHHHHhc-----CCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 242 IAYPSEVEGFATQLLKVQDNI--PICASIISQHLALYSLQ-----TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 242 i~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
++++ +++++.+....... ..+.+++...++.++|+ .+.+...++.+.++++++.+++.|++++. .+..+
T Consensus 320 i~~~---~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~-~v~~~ 395 (489)
T PLN02483 320 IAGS---KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF-EVLGD 395 (489)
T ss_pred EEcC---HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC-cccCC
Confidence 9988 88999887654321 22334444444455553 12234556678899999999999998865 56555
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.++..+++.+... .+..++..+|+ ++||.+.+..++. ..+.+|++++. .+++++++++++|.++++.+.-.
T Consensus 396 ~~sp~~~l~l~~~-~~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~ 470 (489)
T PLN02483 396 NDSPVMPIMLYNP-AKIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGIK 470 (489)
T ss_pred CCCCEEEEEECCH-HHHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCce
Confidence 5455666554322 13457888876 6899999743322 23689999987 79999999999999998876543
No 146
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=1.6e-28 Score=228.82 Aligned_cols=319 Identities=14% Similarity=0.118 Sum_probs=232.7
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
|...++.+.+++.+.. ..+ .....+..+.+.+.++++++.++ ++|++++|+|++++.++.++..+||++++
T Consensus 11 p~~~~~~v~~~~~~~~-----~~~--~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv 83 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDW-----CTW--DSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLV 83 (363)
T ss_pred CCCCCHHHHHHhCCCC-----CCC--ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEE
Confidence 4445677777665433 112 23455566666677777778865 36999999999999999999988998888
Q ss_pred eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..+++++. ...++..|.+++.+ +.+++ ..+|++.+++.++.++.++++++.+++||||+.+| +++|+++|+++
T Consensus 84 ~~~~~~~~~~~~~a~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~ 158 (363)
T TIGR02326 84 VINGAYGARIVQIAEYLGIPHHVV-DTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH 158 (363)
T ss_pred EeCChhhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc
Confidence 77777665 36678899999988 77644 46799999999986554678888999999999999 89999999999
Q ss_pred CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHh----------------
Q 015890 197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKV---------------- 258 (398)
Q Consensus 197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~---------------- 258 (398)
|+++|+|+++ ++... ......+.+++++|++|+++ ++| +|+++++ ++.++.+...
T Consensus 159 g~~livD~~~~~g~~~--~~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (363)
T TIGR02326 159 GKVTIVDAMSSFGGIP--IDIAELHIDYLISSANKCIQGVPG--FGFVIAR---QAELAACKGNARSLSLDLYDQWRCME 231 (363)
T ss_pred CCEEEEEccccccCcc--cchhhcCccEEEecCccccccCCc--ceEEEEC---HHHHHHhhcCCCceeecHHHHHHHHh
Confidence 9999999888 54322 22333345588899999884 345 6999998 5666554210
Q ss_pred --hccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCC-CC
Q 015890 259 --QDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LD 330 (398)
Q Consensus 259 --~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-~~ 330 (398)
.....++.+.+.+.++.++++.. . ..+++..+++.++++++++.|++++. .+..+ ..+...++.++... .+
T Consensus 232 ~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (363)
T TIGR02326 232 DNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGF-EPLLDDEIQSPIITSFYSPEDPDYR 310 (363)
T ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCceEEEEECCCCCCCC
Confidence 01123567888888877777652 2 23567778899999999999988765 34322 23445667776431 24
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-CCCHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~l~~~~ 381 (398)
..++.+.| +++||.+.+|..+ ..++|||++. ..+.+++++++++|++++
T Consensus 311 ~~~v~~~L-~~~gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 311 FADFYQRL-KEQGFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred HHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 56777766 5889999998765 3578999964 478999999999998875
No 147
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=1.2e-28 Score=232.92 Aligned_cols=328 Identities=16% Similarity=0.136 Sum_probs=230.5
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH-HHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ-AFV 103 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~-a~~ 103 (398)
.+.++++.|.+++++|+.+.+++.+. . ....|.+ ..|..+++++++++++++++.+.++++++++++. ++.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~ 96 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA 96 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence 44589999999998777777766665 2 1234554 6788999999999999999887767777775554 444
Q ss_pred HHHHHhccC--CCEEEEeCCCCcChhhHHHhcC----cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 104 NIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTG----VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 104 ~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
.+..++..+ ||+|+++.+.|+.+...++..| .+++.+ +.+++ +.+|++.+++.+.+++ ++|++++|+ |+
T Consensus 97 ~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~t--~~viv~~~~-~~ 171 (398)
T cd00613 97 AGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV-PSDEG-GTVDLEALKEEVSEEV--AALMVQYPN-TL 171 (398)
T ss_pred HHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe-ccCCC-CCcCHHHHHHhcCCCe--EEEEEECCC-CC
Confidence 555555565 9999999999999888887777 888888 76543 4689999999998664 999999885 89
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC----cceeEEEEccCCcHHHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~i~~~~~~~~~~ 252 (398)
|.+.+ .+++|+++|+++|+++|+|+++ ....... ....+.+++++|++|++ .| |+++|+++.+ ++++
T Consensus 172 G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~~~~--~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~---~~~~ 243 (398)
T cd00613 172 GVFED--LIKEIADIAHSAGALVYVDGDNLNLTGLKP--PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK---KELV 243 (398)
T ss_pred ceecc--hHHHHHHHHHhcCCEEEEEeccccccCCCC--hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh---hhhH
Confidence 99854 4699999999999999999988 3321111 11224568899999998 44 7889999998 5666
Q ss_pred HHHHHh-----------------------------hccCCCCcchHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHH
Q 015890 253 TQLLKV-----------------------------QDNIPICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 253 ~~l~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
+.+... .....++.+.....++...+. .....+++..++++++++++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~ 323 (398)
T cd00613 244 RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKR 323 (398)
T ss_pred hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 553110 000112222233333333333 23456778889999999999999
Q ss_pred hccCCCCccccCCccE--EEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 303 LSPLGEGAVKGGEGAI--YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
|++++.... +.+.. .+++.++.. ..+..+++..|+ ++||.+.... ....+.+|++++. .+++|++++++.|
T Consensus 324 L~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 324 LKEVGGVLP--FNGPFFHEFVLRLPPLYGIRAEDLAKALI-DGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred HHhcCCccc--CCCCeeEEEEEEcCCcchHHHHHHHHhhh-hcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 998776332 22222 246666531 124667888775 7899875421 2245789999988 8999999998764
No 148
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1e-28 Score=231.54 Aligned_cols=327 Identities=14% Similarity=0.126 Sum_probs=231.6
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCC-----CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc---cCCC
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADE-----GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGD 114 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~---~~gd 114 (398)
++|+.+++++.+.+... ..++... ...+..+.+.+.+.+.++.++++|++++|+|++++.++.++. .+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~ 87 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKR 87 (379)
T ss_pred CCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence 35789999998877542 2222111 113344555566666678888899999999999999998864 3568
Q ss_pred EEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 115 SVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 115 ~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
+|++...+|+++.. .++..|.+++.+ +.+.+ +.+|++.+++.+++++ +++++++++||||.++| +++|.+
T Consensus 88 ~vv~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-g~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~~---~~~I~~ 160 (379)
T TIGR03402 88 HIITTAVEHPAVLSLCQHLEKQGYKVTYL-PVDEE-GRLDLEELRAAITDDT--ALVSVMWANNETGTIFP---IEEIGE 160 (379)
T ss_pred eEEEcccccHHHHHHHHHHHHcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEEcccCCeeeccc---HHHHHH
Confidence 89998888876553 334569999988 77654 4689999999998765 99999999999999999 788999
Q ss_pred HHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCCCcc
Q 015890 192 LCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICAS 267 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~ 267 (398)
+|+++|+++++|+++ ++..... ....+.++++.|.+|.+|++| +|+++.++.. .+...+. ........+.+
T Consensus 161 l~~~~g~~vivD~~~~~g~~~~~--~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~-~~~p~~~g~~~~~~~~~gt~~ 235 (379)
T TIGR03402 161 IAKERGALFHTDAVQAVGKIPID--LKEMNIDMLSLSGHKLHGPKG--VGALYIRKGT-RFRPLLRGGHQERGRRAGTEN 235 (379)
T ss_pred HHHHcCCEEEEECcccccccccC--cccCCCCEEEEcHHHcCCCCc--eEEEEECCCC-CCCCcccCCccCCCcCCCCcc
Confidence 999999999999999 5542222 222334578889999777666 6777766421 1100000 00011245677
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
.+...++.++++...+++++..++.+++++++.+.|.+ ++.+.+..+.. +..+.+.++. .+..++...| +++|
T Consensus 236 ~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~g 312 (379)
T TIGR03402 236 VPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY--IEGEAILLLL-DMEG 312 (379)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC--CCHHHHHHhh-ccCC
Confidence 77788788888764456777778888889999998875 66655554321 1122223332 2466777765 6889
Q ss_pred eEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 344 VVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 344 i~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
|.+++|..|.. ++.||+|++. ++++|++++++.|+++++++.+
T Consensus 313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999987732 3689999999 8999999999999999887653
No 149
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=5.2e-28 Score=226.43 Aligned_cols=345 Identities=16% Similarity=0.118 Sum_probs=243.1
Q ss_pred chHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
...++.+++..+++-++-.+ .+.....++|.+.+++.+++.... .......+..++.+.+++.+.+.+|.++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~ 82 (371)
T PRK13520 5 EEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL-GDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYIT 82 (371)
T ss_pred HHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEe
Confidence 34555555555555443333 344344568898999988776421 1111123455666777777777778877788999
Q ss_pred cChHHHHHHHHHHhcc----CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890 96 AGANQAFVNIVLTLCD----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
+|+++++..++.++.. ++++|++..++|+.+...++..|.+++.+ +.+.+ +.+|++.|++.+++++ ++|++.
T Consensus 83 ~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~vi~~ 158 (371)
T PRK13520 83 SGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRA-PLDDD-YRVDVKAVEDLIDDNT--IGIVGI 158 (371)
T ss_pred cCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEe-cCCCC-CcCCHHHHHHHHhhCC--EEEEEE
Confidence 9999999999887754 57899999999999998889999999988 77643 4689999999998765 777777
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ec--cCCCc--cccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM--YDGRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~--~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
+++|+||.+.| +++|.++|+++|+++++|++| +. +.... ......+...+..|.+|+. .+|.++|+++..
T Consensus 159 ~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~-~a~~~~G~~~~~ 234 (371)
T PRK13520 159 AGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMG-LAPIPAGGILFR 234 (371)
T ss_pred cCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcccc-CccCCceEEEEc
Confidence 88999999999 999999999999999999999 22 21111 1111122345566788954 467888987765
Q ss_pred CCcHHHHHHHHHhhccC--------CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCC
Q 015890 246 SEVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGE 315 (398)
Q Consensus 246 ~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~ 315 (398)
+ +++++.+....... ..+.+.....++.++++. ..+.+++..++..++++++.+.|++.+. . +..+.
T Consensus 235 ~--~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~ 311 (371)
T PRK13520 235 D--ESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGF-EPVIEPV 311 (371)
T ss_pred C--HHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCC-EEecCCC
Confidence 4 55666553221111 112334456666666654 2344677888899999999999988754 5 44444
Q ss_pred ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.+++.+.++ +..++..+|. ++||.+.++. .++++|++++. .+++|++++++.|+++++
T Consensus 312 -~~~v~~~~~----~~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 312 -LNIVAFDDP----NPDEVREKLR-ERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -ceEEEEecC----CHHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 667777775 3567777775 7799998753 45789999876 689999999999987654
No 150
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=2.7e-28 Score=227.09 Aligned_cols=318 Identities=17% Similarity=0.183 Sum_probs=229.9
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
|..+++.+.+++...... + .....+..+.+.+.++++++++++ .|++++|+++++..++.+++.++|++++
T Consensus 7 p~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~ 79 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCH-----W--DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLV 79 (355)
T ss_pred CCCCCHHHHHHhhhhccC-----C--CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEE
Confidence 555788888888773211 1 112235555666666666677654 5788999999999999999988888887
Q ss_pred eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..+++++ +...++..|.+++.+ +.+. ++.+|++++++.++++++.+++++++++||||...+ +++|+++|+++
T Consensus 80 ~~~~~~~~~~~~~a~~~g~~~~~i-~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~ 154 (355)
T TIGR03301 80 LINGAYGERLAKICEYLGIPHTDL-NFSE-YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH 154 (355)
T ss_pred ECCCchhhHHHHHHHHcCCceEEE-ecCC-CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc
Confidence 7777655 346678899999988 7654 346899999999986555678888899999999998 89999999999
Q ss_pred CCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890 197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ--------------- 259 (398)
Q Consensus 197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~--------------- 259 (398)
|+++|+|+++ ++. .+......+.+++++|++|++ |++| +||++++ +++++.+....
T Consensus 155 ~~~livD~~~s~g~--~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (355)
T TIGR03301 155 GAVLIVDAMSSFGA--IPIDIEELDVDALIASANKCLEGVPG--FGFVIAR---RDLLEASAGNARSLYLDLYDQWAYME 227 (355)
T ss_pred CCEEEEEeccccCC--cccchhhcCccEEEecCCcccccCCc--eeEEEEC---HHHHHHhhCCCCCceeeHHHHHHHhh
Confidence 9999999877 543 222223335568899999987 4445 6999999 77777654210
Q ss_pred --ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCC-CCh
Q 015890 260 --DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LDD 331 (398)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~ 331 (398)
....++++...+.++..+++.. ...+.+..++++++++++.+.|++++. .+..+ .++.++++.++... .+.
T Consensus 228 ~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T TIGR03301 228 KTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF-QPLLPERWQSPIIVSFLYPDDPDFDF 306 (355)
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC-eeecCCCCCCCcEEEEECCCCCcchH
Confidence 1134567777777777777642 123577777888899999999988765 43322 23456777776422 234
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
.++..++ .++||.+.++..+.. +++||++.. .+.++++++++.|+++
T Consensus 307 ~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 307 DDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 5677766 588999999865433 799999865 7899999999999865
No 151
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=4.7e-29 Score=233.54 Aligned_cols=317 Identities=19% Similarity=0.148 Sum_probs=224.1
Q ss_pred CcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhcc---CCCE
Q 015890 44 PPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCD---AGDS 115 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~----~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~---~gd~ 115 (398)
+|+.+++++.+.+...... .+.......+..+.+.+.+.+.++.+ ++++++++|++++++.++.++.. +||+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~ 90 (373)
T cd06453 11 KPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDE 90 (373)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCE
Confidence 4788999998877442110 11111112233333444444444776 77899999999999999999987 8999
Q ss_pred EEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 116 VVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 116 Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
|+++.++|++. ...++..|++++.+ +.+. ++.+|++++++.++++ +++|++++++||||.+.| +++|.+
T Consensus 91 vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~--~~~v~~~~~~~~tG~~~~---~~~i~~ 163 (373)
T cd06453 91 IVTSVMEHHSNIVPWQQLAERTGAKLKVV-PVDD-DGQLDLEALEKLLTER--TKLVAVTHVSNVLGTINP---VKEIGE 163 (373)
T ss_pred EEECcchhHHHHHHHHHHHhhcCcEEEEe-ecCC-CCCcCHHHHHHHhcCC--ceEEEEeCcccccCCcCC---HHHHHH
Confidence 99999999874 33445779999988 7764 4568999999999875 499999999999999999 889999
Q ss_pred HHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc---------
Q 015890 192 LCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------- 261 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~--------- 261 (398)
+|+++|+++|+|++| ++..... ....+.++++.|++|+++. .++|+++++ +++++.+......
T Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~~~--~g~g~~~~~---~~~~~~~~~~~~g~~~~~~~~~ 236 (373)
T cd06453 164 IAHEAGVPVLVDGAQSAGHMPVD--VQDLGCDFLAFSGHKMLGP--TGIGVLYGK---EELLEEMPPYGGGGEMIEEVSF 236 (373)
T ss_pred HHHHcCCEEEEEhhhhcCceeee--ccccCCCEEEeccccccCC--CCcEEEEEc---hHHhhcCCCeecCCCccccccc
Confidence 999999999999999 4332111 1112345777899999974 568999988 6776665433210
Q ss_pred ------------CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCCC
Q 015890 262 ------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPE 326 (398)
Q Consensus 262 ------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~ 326 (398)
...+++.....++..+++.. +..+++..++.+++++++.+.|++++++.+..+. .+.++++.++.
T Consensus 237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (373)
T cd06453 237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEG 316 (373)
T ss_pred cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECC
Confidence 11244555555555555431 1235677778888899999999888765655321 24566777653
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
.+..++.+.|. ++||.+.+|..|. .+++||++++. .+++|++++++.|
T Consensus 317 --~~~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 317 --IHPHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred --cCHHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 25677777774 7999998877542 36799999998 7899999988764
No 152
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.9e-28 Score=231.74 Aligned_cols=331 Identities=16% Similarity=0.116 Sum_probs=229.0
Q ss_pred CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
|+++++|+.++ -++..+|++.+++.+++.+...+ .|++.+...++++.+++++ +. ++. +++++|+++
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g~-~~~-~~~~sG~~a 118 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----GK-EAA-LVFTSGYVS 118 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----CC-CcE-EEECcHHHH
Confidence 47789998875 56678999999999887653221 1222333445555555554 53 344 455556688
Q ss_pred HHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015890 102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS 177 (398)
Q Consensus 102 ~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt 177 (398)
+..++..+.. +++.|+.....|......++..|.++..+ +. .|++++++.++.. ..+++|++++++|++
T Consensus 119 n~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~ 191 (407)
T PRK09064 119 NDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIF-RH------NDVAHLEELLAAADPDRPKLIAFESVYSMD 191 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCC
Confidence 8888887764 66666666556666656667777776555 32 3778888887621 235899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
|.+.+ +++|.++|+++|+++|+||+| ++ +. |..... ...+.+++++|+||+||++| ||++++ ++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~---~~ 262 (407)
T PRK09064 192 GDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS---AA 262 (407)
T ss_pred ccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC---HH
Confidence 99999 999999999999999999999 43 22 211111 11234688999999998777 999988 78
Q ss_pred HHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890 251 FATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 328 (398)
Q Consensus 251 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (398)
+++.+......+ +.+.++..++++.++++.... .....+++.++++++.+.|++.+. .+..+. ++++.+.++..
T Consensus 263 ~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~iv~i~~~~~- 338 (407)
T PRK09064 263 LVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE-SNEERERHQERAAKLKAALDAAGI-PVMPNE-SHIVPVMVGDP- 338 (407)
T ss_pred HHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence 888776554322 334566667777777764222 133456778888999999988765 555554 66666666431
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
....++.++|++++||.+++...+.. .+++||+++. .+++|++++++.|+++++++.
T Consensus 339 ~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 339 EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 23567888887667999988654332 3679999987 789999999999999987653
No 153
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=5.3e-28 Score=225.85 Aligned_cols=322 Identities=17% Similarity=0.151 Sum_probs=231.9
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
|..+++.+++++...+ . .+ .....+..+.+.+.++++.+.++ +.+++++|+++++..++.++..+||+|++
T Consensus 13 P~~~~~~~~~a~~~~~-~----~~--~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv 85 (368)
T PRK13479 13 PLTTSRTVREAMLRDW-G----SW--DDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLV 85 (368)
T ss_pred CCCCCHHHHHHhCCCC-C----CC--ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEE
Confidence 5567888888876543 1 11 11233455555555666667754 45889999999999999999999999999
Q ss_pred eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
+.++|++. ...++..|++++.+ +.+.+ +.+|++++++.++.+++.++|++++++||||...| +++|.++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~ 160 (368)
T PRK13479 86 PDNGAYGARIAQIAEYLGIAHVVL-DTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH 160 (368)
T ss_pred EeCCchHHHHHHHHHHcCCcEEEE-ECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc
Confidence 99888775 36778899999998 77643 46799999999976554688999999999999999 88999999999
Q ss_pred CCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890 197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ--------------- 259 (398)
Q Consensus 197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~--------------- 259 (398)
|+++|+|+++ ++.. +......+..++++|++|++ |++| +||++++ +++++.+....
T Consensus 161 ~~~livDa~~~~g~~--~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T PRK13479 161 GKRLIVDAMSSFGAI--PIDIAELGIDALISSANKCIEGVPG--FGFVIAR---RSELEACKGNSRSLSLDLYDQWAYME 233 (368)
T ss_pred CCEEEEEcccccCCc--cccccccCceEEEecCccccccCCC--ceEEEEC---HHHHHHhhcCCCCeeecHHHHHhhhc
Confidence 9999999776 5432 22222233457788999976 5566 6999999 67777654321
Q ss_pred --ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCC-CCCh
Q 015890 260 --DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEK-HLDD 331 (398)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~ 331 (398)
....++++.+.+.++.++++.. ..++++..+++.++++++++.|++++. .+..+. ......+.++.. ..+.
T Consensus 234 ~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
T PRK13479 234 KTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGF-EPLLDAEIQSPIIVTFHAPADPAYDF 312 (368)
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-cccCCchhcCceEEEEECCCCCCcCH
Confidence 1222466777777777776642 234577778899999999999988876 433221 112233334332 1256
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cCCCHHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++.++|. ++||.+.+|..+ ..+++|++. +..++++++++++.|+++++++
T Consensus 313 ~~l~~~L~-~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 313 KEFYERLK-EQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred HHHHHHHH-HCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 67888775 789999987543 356899986 5488999999999999988764
No 154
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=9.1e-29 Score=219.80 Aligned_cols=343 Identities=17% Similarity=0.184 Sum_probs=255.5
Q ss_pred HHcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 26 VRGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 26 ~~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
..+|+.|+||..|. +.++ .+|.+.++++++..+-+.. ......+.+.++++.|.+..+ ..+.|++++|++||+
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~---sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~ 113 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHV---SNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEAN 113 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhc---ccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHH
Confidence 45799999999765 4554 6899999999998763211 222224556677777766555 578999999999999
Q ss_pred HHHHHHhcc----C-CCEEEEeCCCCcChhhHHHhcCcEEEEe---ccCCC----CCCCCChHHHHHhhccCCCCeEEEE
Q 015890 103 VNIVLTLCD----A-GDSVVMFAPYYFNSYMSFQMTGVTHILV---GPCSS----KTLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 103 ~~~~~~l~~----~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~---~~~~~----~~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
+.++....+ + ..+|+....+|++-...+-..+.+..+. .|..+ ..| -|++++++++++++ .+|++
T Consensus 114 EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-nDi~al~~ai~~~t--aAviv 190 (404)
T COG4992 114 EAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-NDIEALEAAIDEDT--AAVIV 190 (404)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-CCHHHHHHHhccCe--EEEEE
Confidence 999998652 2 2489999999987554333333322111 01111 112 28999999999965 99999
Q ss_pred eCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 171 VNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 171 ~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
+..+...|++ .+++.++++.++|++||+++|.||++ ++.+|..+....++....+.++.|.+| +|+++|+++.+
T Consensus 191 EPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~Lg-GG~PigA~la~-- 267 (404)
T COG4992 191 EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALG-GGFPIGAMLAT-- 267 (404)
T ss_pred ecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeecccc-CCccceeeEEc--
Confidence 9889999996 56678999999999999999999999 777776554443333344558899998 88999999998
Q ss_pred cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890 248 VEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 325 (398)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 325 (398)
+.+.+.+.......+++.|+.+.+++.+.|+. . ++.+++..+.-...++.|.+...+.+.++-+... |+++-+.+.
T Consensus 268 -~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~-GLmiGiel~ 345 (404)
T COG4992 268 -EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGR-GLMIGIELK 345 (404)
T ss_pred -hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecc-eeEEEEEec
Confidence 56666677777788999999999999999986 2 2444555555555666677766666655666677 888888887
Q ss_pred CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
... ...+++..+ .++|+.+.+. .++.||+...- .+++++++++++|.+++.....
T Consensus 346 ~~~-~a~~~~~~~-~~~gvL~~~a----~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 346 EPY-RARDIVRAL-REEGVLVLPA----GPNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred Ccc-cHHHHHHHH-HHCCeEEecC----CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 543 467788876 5899999886 47799999888 8999999999999999987654
No 155
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.2e-28 Score=212.22 Aligned_cols=336 Identities=22% Similarity=0.362 Sum_probs=250.3
Q ss_pred cHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhc-cCCCEEEEe
Q 015890 45 PKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMF 119 (398)
Q Consensus 45 ~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~ 119 (398)
|..+++.....+.. ++.+.|..+.|.+-+|+.+++|+.++-|. ++++|++|+|++.|+..++..++ .+.+.|++|
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliP 167 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIP 167 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEee
Confidence 44555555555542 35788999999999999999999999874 57899999999999999999987 456899999
Q ss_pred CCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 120 APYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
-|-|+-|......+|...+.+ ..+ +.+|.+|.++|++.++ ..-.++++++.||.||||.+++.+.+++|+.+|.+
T Consensus 168 iPQYPLYsAti~l~~~~~v~Y-yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~ 246 (475)
T KOG0258|consen 168 IPQYPLYSATISLLGGTQVPY-YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAE 246 (475)
T ss_pred cCCCchhHHHHHHhCCcccce-eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHH
Confidence 999999999999999988877 555 4579999999998876 33347899999999999999999999999999999
Q ss_pred cCCEEEEeece--eccC-CCccccc---------cC-Cc--EEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890 196 AGSWLVVDNTY--FMYD-GRKHCCV---------EG-DH--VVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 196 ~~~~livDe~~--~~~~-~~~~~~~---------~~-~~--~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
++++++.||+| -.|. +.++... .+ ++ .+..+|.||.+ |-.|.|.||+-.-+..++..+.+.+..
T Consensus 247 ~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~ 326 (475)
T KOG0258|consen 247 EGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLA 326 (475)
T ss_pred cCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHH
Confidence 99999999999 3332 2222211 11 22 35567889988 447899999754443355555554443
Q ss_pred ccCCCCcchHHHHHHHHHhcC---Cch-------HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC--CC
Q 015890 260 DNIPICASIISQHLALYSLQT---GPE-------WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--EK 327 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~---~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~~ 327 (398)
. ...+++...|........- ++. .-......++.++..+.+.+..+.++.+..++|++|.+.++. ..
T Consensus 327 s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~k 405 (475)
T KOG0258|consen 327 S-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPK 405 (475)
T ss_pred h-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHH
Confidence 2 3456667777766666653 221 123345566777788889999998889999999999986653 21
Q ss_pred ---------CCChHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 328 ---------HLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 328 ---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
...+.-.+.+||++.||++.||+.|++. -|+|.++-.+. + ..+++++++=+++..
T Consensus 406 aie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~---~-~~i~~~~~fH~~f~~ 472 (475)
T KOG0258|consen 406 AIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG---L-EIIEKFKKFHAEFMD 472 (475)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch---h-HHHHHHHHHHHHHHH
Confidence 1234456788999999999999999863 37999887522 3 666777666666554
No 156
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.3e-28 Score=230.93 Aligned_cols=328 Identities=16% Similarity=0.139 Sum_probs=230.5
Q ss_pred EcCCccCCCCCcHHHHHHHHHhhcCCC----CCCCCCC----CCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHH
Q 015890 34 SLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGAD----EGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVN 104 (398)
Q Consensus 34 ~l~~g~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~----~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~ 104 (398)
.|+.+.+++++|+.+++++.+.+.+.. ...|... ....++++.+++++ +.+. ++|++++|++++++.
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~al~~ 77 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAPSSAHVVFTNNATTALNI 77 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHHHHHHH
Confidence 466677777788999999988776532 1123221 33345555555555 6643 589999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
++.+++++||+|+++.++|.++. ..++..|.+++.+ +.+.+ +.+|++++++.+++++ ++|++++|+||||.+
T Consensus 78 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~n~tG~~ 153 (376)
T TIGR01977 78 ALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIV-KCDNE-GLISPERIKRAIKTNT--KLIVVSHASNVTGTI 153 (376)
T ss_pred HHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCC--eEEEEECCCCCcccc
Confidence 99999999999999999997754 3445669999988 76643 5689999999997654 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV- 258 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~- 258 (398)
+| +++|.++|+++|+++|+|+++ ++...... ...+.++++.|.+|+++.|. ..|.++.++. ..+..+...
T Consensus 154 ~~---~~~i~~l~~~~~~~livD~a~~~g~~~~~~--~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~--~~~~~~~~~~ 225 (376)
T TIGR01977 154 LP---IEEIGELAQENGIFFILDAAQTAGVIPIDM--TELAIDMLAFTGHKGLLGPQ-GTGGLYIREG--IKLKPLKSGG 225 (376)
T ss_pred CC---HHHHHHHHHHcCCEEEEEhhhccCccCCCc--hhcCCCEEEecccccccCCC-CceEEEEcCC--cCcCceecCC
Confidence 99 888999999999999999999 65433221 22344588899999985332 3566665542 111111100
Q ss_pred ---------------hccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccE
Q 015890 259 ---------------QDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAI 318 (398)
Q Consensus 259 ---------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~ 318 (398)
......+.+.+...++..+++... ...++..++...+.+++.+.|.+.+++.+..+. ...
T Consensus 226 ~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (376)
T TIGR01977 226 TGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVG 305 (376)
T ss_pred CccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCC
Confidence 001123456666666666665411 234566777888889999999877765665431 134
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------CRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
.+++.++. .+..++...|.+++||.+..|..|. ..+.||++++. .+++|+++++++|++
T Consensus 306 ~v~~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 306 VVSFTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEEECC--CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 56666653 2567788877644599999987653 34789999988 899999999999875
No 157
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=2.1e-28 Score=230.00 Aligned_cols=334 Identities=12% Similarity=0.132 Sum_probs=227.7
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|.. .++ .+|.+.+++.+++.+.... .. ....+....+++.+....+ .+.+++++++++|+.
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~--~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e 111 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT--SR-AFHSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccc--cc-ccCCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHH
Confidence 46888999987643 232 5899999999998763211 11 1122334445555554434 358999999999999
Q ss_pred HHHHHhcc---------CC-CEEEEeCCCCcChhhHHH-hcCcEEEE--eccCCCCC---CCCChHHHHHhhccCCCCeE
Q 015890 104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQ-MTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~-~~g~~~~~--~~~~~~~~---~~~d~e~l~~~l~~~~~~~~ 167 (398)
.+++.... +| ++|+....+|++....+. ..+..... +.+....- ...|++.+++.++++ +++
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~ 189 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPN--TAA 189 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccC--eEE
Confidence 99998742 34 689999999988664332 22211000 00110000 012789999998765 489
Q ss_pred EEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 168 VSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 168 v~i~~p~nptG~~~~~-~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
|++++++||+|.++++ +++++|.++|+++|+++|+||+| +++.+........+....+.++||.+|.+|+|+||+++
T Consensus 190 viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~ 269 (396)
T PRK04073 190 FLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAA 269 (396)
T ss_pred EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEE
Confidence 9999999999998765 47999999999999999999999 65555322211111112244679999988899999999
Q ss_pred cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--CCccccCCccEEEEe
Q 015890 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWA 322 (398)
Q Consensus 245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~ 322 (398)
+ +++++.+.......+++.++..++++.++|+...+ +...++..++.+++.+.|++++ .+....+. ++++++
T Consensus 270 ~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~ 343 (396)
T PRK04073 270 N---RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGV 343 (396)
T ss_pred c---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEE
Confidence 9 78888876554556778899999999999874211 1233445566777777776653 22333445 677888
Q ss_pred eCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
.++. +..++.++|+ ++||.+.+. .+++|||+++. .+++++++++++|.+++
T Consensus 344 ~~~~---~~~~~~~~l~-~~Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 344 ELNE---PARPYCEALK-EEGLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred Eecc---hHHHHHHHHH-HCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 8763 4567888775 789999763 35789999765 69999999999998765
No 158
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=5.8e-28 Score=226.19 Aligned_cols=333 Identities=16% Similarity=0.166 Sum_probs=229.8
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|.. .++ .+|++.+++.+++.+.. .. ......+++..+++++.+..+ .+.+++++|+++|+.
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~a~~ 100 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW--HV-SNLFTNSLQEEVASLLAENSA--GDLVFFCNSGAEANE 100 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--cc-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHHHHH
Confidence 57899999988752 222 68999999999987631 12 223446788999999877654 357999999999999
Q ss_pred HHHHHhc-cCC-CEEEEeCCCCcChhhHH-HhcCcEEEE--eccCCCC-CC--CCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSK-TL--HPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 104 ~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~-~~--~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
.+++... .+| ++|++.+++|++..... ...+..... +.+...+ .+ ..|++.+++.+.++ +++|+++.+++
T Consensus 101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~ii~e~i~~ 178 (377)
T PRK02936 101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEE--VAAVMLEVVQG 178 (377)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCC--eEEEEEecccC
Confidence 9999653 234 67999999998755322 222221100 1011111 00 12789999998755 48999998899
Q ss_pred CCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 176 ptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
++|.. .+++++++|.++|++||+++|+||+| +++.+........+....+.++||.++ +|+|+||++++ +++.
T Consensus 179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~G~~ig~v~~~---~~~~ 254 (377)
T PRK02936 179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG-NGIPVGAMIGK---KELG 254 (377)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc-CCCccEEEEEc---HHHH
Confidence 99886 58899999999999999999999999 666554322111111111347899998 89999999998 7888
Q ss_pred HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCCCccccCCccEEEEeeCCCCC
Q 015890 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVKGGEGAIYLWARLPEKH 328 (398)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~ 328 (398)
+.+.......+++.+++.++++.++|+... .++..++++++.+.+++.|+ +++.+....+. +.++|+.++.
T Consensus 255 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~~~~i~~~~-- 329 (377)
T PRK02936 255 TAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGK-GLMIGIECTE-- 329 (377)
T ss_pred hhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-ceEEEEEecc--
Confidence 877655444566789999999999997521 12233344444444444443 34432223344 7889999874
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+...+...+ .++||.+.|+ ..+++|++++. .+++++++++++|.+++
T Consensus 330 -~~~~~~~~l-~~~gv~v~~~----g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 330 -EVAPVIEQL-REEGLLVLSA----GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred -hHHHHHHHH-HHCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 245666655 5899999885 35799999754 78999999999998753
No 159
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=5.3e-28 Score=227.90 Aligned_cols=334 Identities=14% Similarity=0.124 Sum_probs=231.9
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC--CCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY--GADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+.|+.+.+. +.|+.+++++.+.+.......+ ....+ ..+..+.+.+.+.+.++.++++|++++|+|++++.++.
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIK 82 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHH
Confidence 4666666544 5689999999887643211111 00001 11233344444455558888899999999999999887
Q ss_pred Hhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 108 TLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 108 ~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
++. ++||+|+++.++|+.....+ +..|.+++.+ +.+++ +.+|++.+++.+++++ ++|++++++||||.+
T Consensus 83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~v~~~~n~tG~~ 158 (402)
T TIGR02006 83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL-PPKSN-GLIDLEELKAAIRDDT--ILVSIMHVNNEIGVI 158 (402)
T ss_pred HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCC--EEEEEECCCcCceec
Confidence 763 67899999999998765443 4568999998 77644 4689999999998765 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV- 258 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~- 258 (398)
.| +++|.++|+++|+++++|+++ ++...... ...+.++++.|.+|.+|++| +|++++++ +....+...
T Consensus 159 ~~---~~~I~~l~~~~g~~livD~a~a~g~~~~~~--~~~~~D~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~ 228 (402)
T TIGR02006 159 QD---IAAIGEICRERKVFFHVDAAQSVGKIPINV--NELKVDLMSISGHKIYGPKG--IGALYVRR---KPRVRLEALI 228 (402)
T ss_pred cc---HHHHHHHHHHcCCEEEEEcchhcCCcccCc--cccCCCEEEEehhhhcCCCc--eEEEEEcc---CCCCCCCcee
Confidence 99 889999999999999999999 55432222 22334588889999887556 68887774 211111111
Q ss_pred ------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCC
Q 015890 259 ------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHL 329 (398)
Q Consensus 259 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~ 329 (398)
......+.+.....++..+++.....++...++.+++++++.+.|+.++.+.+..+.. ...+.+.++. .
T Consensus 229 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~--~ 306 (402)
T TIGR02006 229 HGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY--V 306 (402)
T ss_pred cCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC--c
Confidence 0112356677777777777765344567778889999999999998877655543211 1112233432 2
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+..++...+ ++|.++.|..|.. .+.||+|++. +|++|++++++.|.++++++.
T Consensus 307 ~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 307 EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344554433 5999988887742 2689999999 899999999999999988764
No 160
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=2.5e-27 Score=221.94 Aligned_cols=334 Identities=16% Similarity=0.138 Sum_probs=228.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC---CCC----CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYG----ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~---~y~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
..++++..-.-.-++++.+++++.+........ .+. ..+...++++.+++++ |. +++++++|+++++
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~ 91 (387)
T PRK09331 18 EEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGK 91 (387)
T ss_pred ccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHH
Confidence 356776643333356899999999887432111 111 1233466666666665 54 4678899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccC-----CCCeEEEEeCCCCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNP 176 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~np 176 (398)
..++.+++++||+|+++.++|++....++..|++++.+ +.+ +.++.+|++.+++.++.. +.+++|++++|+|+
T Consensus 92 ~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~ 170 (387)
T PRK09331 92 FAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREV-PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGN 170 (387)
T ss_pred HHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence 99999999999999999999988888889999999999 763 234578999999998742 24699999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
||.+.+ +++|+++|+++|+++|+|++| ++..+. .....+.+++++|++|+++ ++.++|+++++ +++++.+
T Consensus 171 tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~~--~~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~---~~~i~~~ 241 (387)
T PRK09331 171 YGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMPV--DGKKLGADFIVGSGHKSMA-ASAPSGVLATT---EEYADKV 241 (387)
T ss_pred Cccccc---HHHHHHHHHHcCCEEEEECCcccCCcCC--CHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhc
Confidence 999999 999999999999999999999 543221 1122345688999999997 55689999998 6777776
Q ss_pred HHhhcc--------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEEeeCC
Q 015890 256 LKVQDN--------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLP 325 (398)
Q Consensus 256 ~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~ 325 (398)
...... ...+.+.....++.++++...+.. +..++..++.+++++.|+++++++++. +...+++.++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~ 320 (387)
T PRK09331 242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP 320 (387)
T ss_pred ccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC
Confidence 443211 111222222333333443211222 334455667778999999985546653 222455555554
Q ss_pred CC-------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 326 EK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 326 ~~-------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.. ..+..++.+.| .++||...+. +....+|++....+.+++++++++|+++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 321 SFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred chhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 11 11235677777 4789985432 23456777764468999999999999887763
No 161
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=3.9e-27 Score=222.37 Aligned_cols=334 Identities=14% Similarity=0.087 Sum_probs=228.5
Q ss_pred CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
++++++|+.++ -.+..+|++++++.+++.+.... ......+..+..+.+.+.+.+.++. +..++++++++++..+
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~a 121 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAA 121 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHH
Confidence 46788988875 45557999999999998753211 1111112233344444444444453 4556666666899999
Q ss_pred HHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015890 106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 106 ~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~ 181 (398)
+..+.+ +|+.|+.....|......++..|.++..+ +. .|++.+++.++. ...+++|++++++|++|.+.
T Consensus 122 i~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 122 LSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIF-RH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred HHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEe-CC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 997765 67777766777766677777778877666 32 267777777752 12258899999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
| +++|.++|+++|+++|+||+| ++. .|..... ...+.+++++|+||.+|++| ||++++ +++++.
T Consensus 195 ~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~---~~~~~~ 265 (406)
T PRK13393 195 P---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS---AALCDF 265 (406)
T ss_pred C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC---HHHHHH
Confidence 9 999999999999999999999 333 2221111 11224677899999998777 999888 788887
Q ss_pred HHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 255 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 255 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+......+ +.+.++..++++.++|+...... ..+++++++.+++.+.|++.+. .+..+. ++++.+.+... .+..
T Consensus 266 l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~-~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~v~~~~~-~~~~ 341 (406)
T PRK13393 266 IRSFASGFIFTTSLPPAVAAGALASVRHLKASS-AERERHQDRVARLRARLDKAGI-PHLPNP-SHIVPVMVGDP-VLCK 341 (406)
T ss_pred HHHhCcCceecCccCHHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCeEEEEeCCH-HHHH
Confidence 77654432 34556677778888887522222 2235567778888888887654 455555 55555555321 1346
Q ss_pred HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
++..+|++++||.++++.... +.++|||+++. .+++|+++++++|.+++.++
T Consensus 342 ~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 342 QISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 777877755799998865433 23689999987 79999999999999988764
No 162
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.97 E-value=1.1e-27 Score=226.67 Aligned_cols=347 Identities=13% Similarity=0.078 Sum_probs=238.7
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~ 102 (398)
.+|+.++||..|..... .+|.+.+++.+++.+... .+......+ ....+++++....+.+. +.+++++++++|+
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~~~~~~f~~sGsea~ 115 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDFAKKTLLVTTGSEAV 115 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 57889999988754333 489999999999876431 221222222 34477777766555432 4788888888998
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEE----------------EeccCCCCCCCC--ChHHHHHhhcc-
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHI----------------LVGPCSSKTLHP--DADWLEKTLET- 161 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~----------------~~~~~~~~~~~~--d~e~l~~~l~~- 161 (398)
+.+++... .+..+|+...++|++....+...+.... .+ |.+..+... +++.+++.++.
T Consensus 116 e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~ 194 (425)
T PRK08088 116 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGVSEDDAIASIERIFKND 194 (425)
T ss_pred HHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCC-CccccCccHHHHHHHHHHHHHhc
Confidence 88888754 2335788889999998766555432211 01 111111111 14568887751
Q ss_pred --CCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 162 --KPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 162 --~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
...+++|+++.. ++++....+++.+++|.++|++||+++|+||+| +.+.+........+.++.+.|+||.++ +|
T Consensus 195 ~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G 273 (425)
T PRK08088 195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GG 273 (425)
T ss_pred cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEecccc-CC
Confidence 233678888854 455556789999999999999999999999999 555553322222234455789999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
+|+||++++ +++++.+.......+++.+++.++++.++|+.. ++++++.++...+.++.+.+.+++.+.+....+
T Consensus 274 ~rig~v~~~---~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g 350 (425)
T PRK08088 274 FPLAGVTGR---AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG 350 (425)
T ss_pred CcceeeEec---HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec
Confidence 999999999 788888876666677888999999999999862 244555555555556666666556665333444
Q ss_pred CccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 315 ~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
. |.++|+.+.+.. ....+++..+. ++||.+.++..+ ++.||++++. .+++++++++++|.+++++.
T Consensus 351 ~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 351 L-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred c-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 4 888999984321 12456666665 789998875433 4789999996 78999999999999998753
No 163
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=4.5e-27 Score=221.56 Aligned_cols=339 Identities=15% Similarity=0.139 Sum_probs=229.7
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..| ...++ .+|++.+++.+++.+... +... ...+....+++.+.+..+ .+.++++++|++|+.
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e 111 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDATF--AERVFFANSGAEANE 111 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHH
Confidence 467889999876 33333 689999999998865221 1111 112233455555554433 358999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcEEE---EeccCCCC--C-CCCChHHHHHhhccCCCCeEEE
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSK--T-LHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~~--~-~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.+++.... ..++|+..+.+|++....+...+.... .+.+.... . ...|++.+++.+.++ +++|+
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aaii 189 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDH--TCAVV 189 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCC--eEEEE
Confidence 99997531 235799999999887543322211100 00010000 0 012789999988754 48888
Q ss_pred EeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 170 VVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 170 i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
++ |.||+|.+. +.+.+++|.++|++||+++|+||+| +.+.|........+....+.|+||.++ +|+|+||++.+
T Consensus 190 ie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~rig~vv~~ 267 (403)
T PRK05093 190 VE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFPIGAMLTT 267 (403)
T ss_pred Ee-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEeccccc-CCcceEEEEEc
Confidence 88 667776654 8899999999999999999999999 666664322111111122568999998 89999999999
Q ss_pred CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Ccc-ccCCccEEEEe
Q 015890 246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAV-KGGEGAIYLWA 322 (398)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~~~~~~~~~~ 322 (398)
+++++.+.......+++.+++.++++.++|+... -.+..++++++.+.+.+.|++++. ..+ ..+..+.++|+
T Consensus 268 ---~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~ 342 (403)
T PRK05093 268 ---AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGA 342 (403)
T ss_pred ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEE
Confidence 7888887654444567788999999998776421 134456777778888887776532 111 22234788898
Q ss_pred eCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 323 ~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++... ....+++..++ ++||.+.++ ..+++|++++. .+++++++++++|.+++.++
T Consensus 343 ~l~~~~~~~~~~~~~~l~-~~Gv~v~~~----g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 343 ELKPQYKGRARDFLNAAA-EEGVMVLVA----GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred EecCcchhHHHHHHHHHH-HCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 886432 13567888776 689999874 35799998777 58999999999999988654
No 164
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.96 E-value=7.9e-27 Score=221.32 Aligned_cols=358 Identities=17% Similarity=0.132 Sum_probs=233.1
Q ss_pred HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC-----CCCCCC-CCcHHHHHHHHHHHh
Q 015890 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI-----SKYGAD-EGLPELRDALVKKLN 82 (398)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~~-~~~~~~~~~l~~~l~ 82 (398)
.++++.+.....-+.+.....++.++|..+.++ +||.+++++...+.+... ..|... .....+.+...+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 4 DNLAEYDPEIADAIEQELKRQEEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 344444433333333322334788999998877 689999998776532111 111111 112233332344666
Q ss_pred hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh-----HHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
+.+|.+..+|++++ +++++..++.+++++||+|+++.|+|.++.. .+...|++++.+ +.+.+++.+|++++++
T Consensus 82 ~~~g~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~ 159 (416)
T PRK00011 82 ELFGAEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY-GVDEETGLIDYDEVEK 159 (416)
T ss_pred HHhCCCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeec-CcCcccCCcCHHHHHH
Confidence 66787766666655 5689999999999999999999999975432 123345778777 7765556789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccCC
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (398)
.++... +++|+++++++ |...+ +++|.++|+++|+++|+|++| ++. .+....... ..+++++|+||++
T Consensus 160 ~i~~~~-~k~v~~~~~~~--~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l-- 230 (416)
T PRK00011 160 LALEHK-PKLIIAGASAY--SRPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTL-- 230 (416)
T ss_pred HHHhcC-CCEEEECCCcC--CCccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCC--
Confidence 997532 58888875544 45567 899999999999999999998 432 221111111 3457799999987
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCC-cchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
+|.|.||+++++ +++++.+.........+ +....++++..++.. ..++++++.+++.++++++++.|++.|. ++.
T Consensus 231 ~g~~gg~i~~~~--~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 307 (416)
T PRK00011 231 RGPRGGLILTND--EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVV 307 (416)
T ss_pred CCCCceEEEeCC--HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eee
Confidence 578889999864 67888776655432222 223333333333322 2234677888899999999999988764 444
Q ss_pred c-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-C-----CCCCeEEEEec-----CCCHHHHHHHHHHHHHH
Q 015890 313 G-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-C-----GCRGHLRISFG-----GLVEDDCKAAADRLRRG 380 (398)
Q Consensus 313 ~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~-----~~~~~iRi~~~-----~~~~~~~~~~~~~l~~~ 380 (398)
. +..++++|+.++....+..++.+.| +++||.+..+.. + ..++.+|++.. ..+++|++++++.|+++
T Consensus 308 ~~~~~~~~~~i~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~ 386 (416)
T PRK00011 308 SGGTDNHLVLVDLRSKGLTGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV 386 (416)
T ss_pred ecCCCCeEEEEeCcccCCCHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence 2 2235888888864322456666655 689999975431 1 13457999642 14688999999999887
Q ss_pred HHH
Q 015890 381 LEE 383 (398)
Q Consensus 381 ~~~ 383 (398)
+..
T Consensus 387 ~~~ 389 (416)
T PRK00011 387 LDN 389 (416)
T ss_pred Hhc
Confidence 664
No 165
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.96 E-value=4.3e-27 Score=222.14 Aligned_cols=343 Identities=11% Similarity=0.088 Sum_probs=225.6
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|..... .+|.+.+++.+++...... . .. ...+..+.+.+.+.+..+. +.++++++|++|+.
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~-~-~~-~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e 102 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLT-S-RA-FYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGE 102 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccc-c-cc-ccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHH
Confidence 47889999988754433 5899999999987653211 1 11 1123445555655554443 57899999999999
Q ss_pred HHHHHhcc----------CCCEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC---CCCCChHHHHHhhccCCCCeE
Q 015890 104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK---TLHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 104 ~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~---~~~~d~e~l~~~l~~~~~~~~ 167 (398)
.++..+.. .+++|++.+.+|++.....-.. +..... +.+.... -...|++.+++.++.. .+++
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~ 181 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDP-NVAA 181 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCC-CeEE
Confidence 99998741 3478999999998866433222 211100 0011100 0113899999999732 3699
Q ss_pred EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 168 v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
|++++++||+|.+++ .+++++|.++|++||+++|+||+| +++.|........+....+.++||.++.+++|+||+++
T Consensus 182 v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~ 261 (400)
T PTZ00125 182 FIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLA 261 (400)
T ss_pred EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEE
Confidence 999988999999886 566999999999999999999999 65555322211111111123578999844459999999
Q ss_pred cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh----ccCCCCccccCCccEEE
Q 015890 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEGAVKGGEGAIYL 320 (398)
Q Consensus 245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~~~ 320 (398)
+ +++++.+.......+++.+++.++++.++|+...+ ....++.+++.+.+++.| ...+.+....+. +.++
T Consensus 262 ~---~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~ 335 (400)
T PTZ00125 262 N---DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK-GLLN 335 (400)
T ss_pred c---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc-cEEE
Confidence 9 78888776554445667788888888777764111 011223333334444444 333443334444 6777
Q ss_pred EeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 321 WARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 321 ~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
++.++.. ..+..+++++|+ ++||.+.|+ ..++|||+++. .+++++++++++|.++++++.+
T Consensus 336 ~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 336 AIVFDHSDGVNAWDLCLKLK-ENGLLAKPT----HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFDS 398 (400)
T ss_pred EEEEccCcchHHHHHHHHHH-HCCeEEeec----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 7777531 224567788776 789999885 36789999765 7899999999999999988754
No 166
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-26 Score=208.35 Aligned_cols=330 Identities=21% Similarity=0.211 Sum_probs=261.8
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
|...+++|++++.+.+ .+ +.++.+.++.+.+.+.++..++.+. +.+++++++|.+++.++.+++.+||+||+.
T Consensus 13 P~~v~~~V~~am~~~~----~~--h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 13 PVPVPPRVLLAMARPM----VG--HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCCCHHHHHHhcCCC----CC--CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 6668899999987654 22 2555667777788888888888774 668888999999999999999999999999
Q ss_pred CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..+.++ +.+.++.+|.+++.+ ... .|-.+|++++++.|+.++.+++|.+++.-++||+..| +++|+++|++||
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~-~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVL-EVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG 161 (383)
T ss_pred eCChHHHHHHHHHHHhCCceEEE-eCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence 999977 678999999999988 544 5567899999999997777899999999999999999 999999999999
Q ss_pred CEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHH----------------hh
Q 015890 198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLK----------------VQ 259 (398)
Q Consensus 198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~----------------~~ 259 (398)
.++|||.+. ++ +.+.....++.++++++..|.++. || +|.+..+ ++..+.+.. +.
T Consensus 162 ~l~iVDaVsS~G--g~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S---~~a~e~~~~~~~~~~ylDL~~~~~~~~ 234 (383)
T COG0075 162 ALLIVDAVSSLG--GEPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVS---ERALEAIEERKHPSFYLDLKKWLKYME 234 (383)
T ss_pred CEEEEEecccCC--CcccchhhcCccEEEecCchhccCCCc--cceeEEC---HHHHHHHhcCCCCceeecHHHHHHHHh
Confidence 999999877 55 455566666777889999999974 55 5777777 444433321 11
Q ss_pred --ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC--CccEEEEeeCCCCCCChHHH
Q 015890 260 --DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEV 334 (398)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 334 (398)
..+++|++.....++..+|+.. .+.++++.++++++.+.+++.++.+|+..+..+ .......+..|++. ++.+.
T Consensus 235 ~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~-~~~~~ 313 (383)
T COG0075 235 KKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGV-DDKKV 313 (383)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCC-CcHHH
Confidence 3678899999999999999863 355899999999999999999999988333312 22345566677765 34444
Q ss_pred HHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcccc
Q 015890 335 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGM 389 (398)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 389 (398)
...+++++|+.+.+|........+||+... .+..++...+.+|..+++++.....
T Consensus 314 ~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~ 369 (383)
T COG0075 314 RRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVE 369 (383)
T ss_pred HHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCccc
Confidence 447888889999998877677899999766 7889999999999999999865433
No 167
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=1.1e-26 Score=217.63 Aligned_cols=315 Identities=16% Similarity=0.137 Sum_probs=222.9
Q ss_pred CcHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc------cCCCEE
Q 015890 44 PPKMAMEKVKELVWDP-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC------DAGDSV 116 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~------~~gd~V 116 (398)
+.|.+.+++...+... ....+ ..+..++.+.+.+.+++++|.++.++++++|+++++..++.++. ++||+|
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v 109 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGL--FPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNI 109 (373)
T ss_pred chHHHHHHHHHHhhcCCCCccc--CccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEE
Confidence 4566677776664331 11111 13445666777777777778888888999999999988877664 367899
Q ss_pred EEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 117 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
+++.++|+++...++..|++++.+ +.+. ++.+|++++++.+++++ ..+++..|+||||.+.+ +++|.++|+++
T Consensus 110 l~~~~~h~~~~~~~~~~G~~~~~v-~~~~-~~~~d~~~l~~~l~~~~--~~vv~~~~~~~tG~~~~---~~~i~~l~~~~ 182 (373)
T TIGR03812 110 IVPESAHFSFEKAAEMLGLELRYA-PLDE-DYTVDVKDVEDLIDDNT--IGIVGIAGTTELGQIDD---IEELSKIALEN 182 (373)
T ss_pred EECCcchHHHHHHHHHcCCeEEEE-eeCC-CCCcCHHHHHHHHhhCc--EEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence 999999999999999999999988 7654 45789999999998765 44444458999999999 89999999999
Q ss_pred CCEEEEeece--e--ccC--CC---ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC----
Q 015890 197 GSWLVVDNTY--F--MYD--GR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP---- 263 (398)
Q Consensus 197 ~~~livDe~~--~--~~~--~~---~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~---- 263 (398)
|+++|+|++| + .+. +. .......+-..+..|.+| +++++.++|+++..+ +++++.+........
T Consensus 183 ~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~--~~~~~~l~~~~~~~~~~~~ 259 (373)
T TIGR03812 183 GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAGGILFRS--KSYLKYLSVDAPYLTVKKQ 259 (373)
T ss_pred CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccc-cCCCcCCceEEEEeC--HHHHhhhcccCcccCCCCC
Confidence 9999999999 2 111 00 111111122355678889 555677888666443 667666532111111
Q ss_pred ----CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890 264 ----ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338 (398)
Q Consensus 264 ----~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (398)
.+.+.....++..+++. ....+++..+++.++++++++.|++++...+..+. .+++.+.++. ..++.++|
T Consensus 260 ~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~v~~~~~~----~~~v~~~L 334 (373)
T TIGR03812 260 ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPV-LNIVAFEVDD----PEEVRKKL 334 (373)
T ss_pred cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCC-ceEEEEEeCC----HHHHHHHH
Confidence 23445566666677764 23556788899999999999999988764444444 6777777652 45777777
Q ss_pred HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 339 AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 339 l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
. ++||.++++. .++++|++++. .+++|+++++++|++
T Consensus 335 ~-~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 335 R-DRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred H-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 5 7899997753 46789999987 689999999999875
No 168
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=9.2e-28 Score=222.51 Aligned_cols=302 Identities=17% Similarity=0.166 Sum_probs=220.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc------------
Q 015890 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD------------ 111 (398)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~------------ 111 (398)
..+.+.+...+ +.....|...++..++++++++++.+++|.+ ..++++|+|+|+++..++.+++.
T Consensus 13 ~~~~~~~~~~~-n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 13 ALLLEMLTSAK-NAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHhc-CCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 34444454444 4335568888899999999999999998875 45799999999999999998753
Q ss_pred CC--CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHH
Q 015890 112 AG--DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 112 ~g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
++ +.|+++.++|..+...++..|.+++.+ +.++++ .+|+++|++.+++ +..+++|++++++||||.+.+
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--- 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLV-PVDEDG-RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--- 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEe-eeCCCC-CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---
Confidence 23 478889999999888888889999999 877654 7899999999975 112488889999999999988
Q ss_pred HHHHHHHHHHcCCEEEEeece--eccCCC--cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890 186 LKRISDLCKAAGSWLVVDNTY--FMYDGR--KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~--~~~~~~--~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~ 260 (398)
+++|+++|+++|+++++|++| +..... ...... .+.+.+..|++|+++ ++.++|+++.+
T Consensus 167 ~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~--------------- 230 (345)
T cd06450 167 LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR--------------- 230 (345)
T ss_pred HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH---------------
Confidence 999999999999999999999 222111 110011 123466789999875 55677776533
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---CCChHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRW 337 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 337 (398)
...+.++...+. ...++++.++..++++++.+.|++++.+.+..+...+++.+.++.. ..+..++.++
T Consensus 231 -------~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~ 301 (345)
T cd06450 231 -------ALKLWATLRRFG--RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDR 301 (345)
T ss_pred -------HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHH
Confidence 333444444443 3556788888888999999999988765655443366666666542 1235677777
Q ss_pred HHHhcCeEEecCCCCCCCCeEEEEecC-C-CHHHHHHHHHHHHH
Q 015890 338 LAHRHGVVVIPGGACGCRGHLRISFGG-L-VEDDCKAAADRLRR 379 (398)
Q Consensus 338 ll~~~gi~v~~g~~~~~~~~iRi~~~~-~-~~~~~~~~~~~l~~ 379 (398)
|. ++|+.+.++..+...+++|++++. . +.+|++++++.|.+
T Consensus 302 L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 75 776666555544456789999987 3 88999999998875
No 169
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=1.1e-26 Score=218.73 Aligned_cols=342 Identities=16% Similarity=0.150 Sum_probs=232.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ..++ .+|++.+|+.+++.+.. .+... ...+....+++.+.+..+ .+.+++++|+++|++
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e 110 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFW--HTGNG-YTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE 110 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcc--cccCc-cCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHH
Confidence 4688899998752 3332 48999999999986521 11111 112333455555554433 468999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCC---CCCCChHHHHHhhccCCCCeEEE
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK---TLHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~---~~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.+++.... +..+|+..+++|++....+...+..... +.+.... -...|++.+++.++++ +++|+
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi 188 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQ--TCAVI 188 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCC--eeEEE
Confidence 99998631 3468999999999977544333321110 0011110 1124789999999754 47888
Q ss_pred EeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 170 VVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 170 i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
++ |.+++|-+. +.+.+++|.++|++||+++|+||+| +++.|........+....+.|++|.++ +|+++||++.+
T Consensus 189 iE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~-gG~~ig~~~~~ 266 (406)
T PRK12381 189 VE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG-GGFPIGAMLTT 266 (406)
T ss_pred Ee-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh-CCCceEEEEEc
Confidence 75 778877643 7899999999999999999999999 666554322111111122459999998 89999999999
Q ss_pred CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccccCCccEEEE
Q 015890 246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVKGGEGAIYLW 321 (398)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~ 321 (398)
+++++.+.......+++.++..++++.++|+... ..+..++++++.+++.+.|++++ .+...... +.+++
T Consensus 267 ---~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-Gl~~~ 340 (406)
T PRK12381 267 ---EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGL-GLLIG 340 (406)
T ss_pred ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecC-eEEEE
Confidence 7888877655555567788999999888876421 22455666677777777776542 11112233 67778
Q ss_pred eeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccc
Q 015890 322 ARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 322 ~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
+.+++.. .....+...+ .++||.+.+. .++.+|++++. .+++++++++++|.++++++.+++
T Consensus 341 ~~l~~~~~~~~~~~~~~l-~~~Gv~v~~~----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 341 CVLNAEYAGKAKQISQEA-AKAGVMVLIA----GPNVVRFAPALNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred EEecCchhhHHHHHHHHH-HHCCcEEeeC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 8876421 1234566655 5899999764 35789999887 799999999999999999887654
No 170
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.96 E-value=4.1e-27 Score=222.18 Aligned_cols=334 Identities=14% Similarity=0.133 Sum_probs=225.4
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|..... .+|.+.+++.+++.+...... ....+....+++.+.+..+ .+.+++++|+++|+.
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e 112 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR---AFRNDQLAPLYEELAALTG--SHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc---ccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence 46788999987754333 389999999999876322111 1112334444455544444 357999999999999
Q ss_pred HHHHHhcc---------CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhccCCCCeE
Q 015890 104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~~~~~~~ 167 (398)
.+++.+.. +| ++|++...+|++....+...+..... +.+....- ...|++.+++.+.+++ ++
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~a 190 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNT--VA 190 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCe--EE
Confidence 99998852 23 68999999998876444333321111 10000000 0137899999998654 99
Q ss_pred EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeE
Q 015890 168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 168 v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
|++++|+||+|.+.+ ++++++|.++|++||+++|+||+| +++.|..... ..++ +++ ++|+++.+.+|+|
T Consensus 191 ii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D--~~~--~~K~l~gg~~~ig 266 (401)
T PRK00854 191 FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD--VTL--IGKALSGGFYPVS 266 (401)
T ss_pred EEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCC--EEE--ecccccCCccCeE
Confidence 999999999999887 456999999999999999999999 5555422111 1122 332 3699973337999
Q ss_pred EEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc--ccCCccE
Q 015890 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI 318 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~ 318 (398)
+++++ +++++.+.......+++.+++.++++.++|+...+ ....+.++++.+++.+.|++++...+ ..+. +.
T Consensus 267 ~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-g~ 340 (401)
T PRK00854 267 AVLSN---SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGR-GL 340 (401)
T ss_pred EEEEc---HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEecc-ce
Confidence 99999 78888776544555667789999999998875211 23456677777888888876543212 2344 44
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
++.+.+.....+..++++.|+ ++||.+.+. ..+++|++++. .+++++++++++|.+++.
T Consensus 341 ~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 341 MLAVELEPEAGGARQYCEALK-ERGLLAKDT----HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEEEEecCchhHHHHHHHHH-HCCeEEecC----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 444444322224667888886 689999753 35799999875 799999999999998764
No 171
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=6.7e-27 Score=218.52 Aligned_cols=333 Identities=14% Similarity=0.127 Sum_probs=234.3
Q ss_pred HcCCCeEEcCCc--cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
.+|+.++||..| ...++.+|++++++.+++... ..+ +.....++++.+++.+.. .....+++++|+++++..
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~---~~~~~~~~~~SGseA~~~ 99 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIG---DKDYLAFFCNSGAEANEA 99 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhc---CcCCEEEEcCccHHHHHH
Confidence 468889999876 345667899999999998652 222 233446678888887642 112246889999999999
Q ss_pred HHHHhc--cCCCEEEEeCCCCcChhh-HHHhcCcEEE--Eec-cCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 105 IVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTGVTHI--LVG-PCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 105 ~~~~l~--~~gd~Vl~~~p~~~~~~~-~~~~~g~~~~--~~~-~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
+++... .++++|++.+.+|++... .+...|.+.. .+. ... ......|++.+++.++++ +++|++++++|+
T Consensus 100 Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~--~a~vi~e~v~~~ 177 (375)
T PRK04260 100 AIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKN--TAAVMLELVQGE 177 (375)
T ss_pred HHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCC--eEEEEECCeECC
Confidence 988864 345789999999987542 2222222110 000 000 000123889999988654 489999999999
Q ss_pred CccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 177 SGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 177 tG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
+|.+. +.+.++++.++|+++|+++|+||+| +...+........+....+.|+||.++ +|+|+||++++ +++.+
T Consensus 178 ~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~---~~~~~ 253 (375)
T PRK04260 178 SGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA-NGVPVGAMLAK---SSLGG 253 (375)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc-CCcceEEEEEc---HHHHh
Confidence 99975 5678999999999999999999999 555543222111111111448999998 89999999999 78877
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
.+.......+++.+++.++++.++|+.. +++.++.++.....++.+.+.+.+.+.+..... .++++|++++. +.
T Consensus 254 ~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~---~~ 329 (375)
T PRK04260 254 AFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTA---DL 329 (375)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecC---cH
Confidence 7765444556777899999999999652 245566667777777788887776654333333 48999999853 45
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
.++.+++. ++||.+.|. ..+.+|++++. .+++++++++++|.++
T Consensus 330 ~~~~~~l~-~~Gi~v~~~----~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 330 SQLVEAAR-DKGLIVLTA----GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHH-hCCCEEecC----CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 67777775 899999875 34789999966 8899999999999765
No 172
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=1.1e-26 Score=222.27 Aligned_cols=341 Identities=17% Similarity=0.175 Sum_probs=232.0
Q ss_pred hHHHHHHHHHHcC----CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-C-CCcHHHHHHHH---HHHhhhcCC
Q 015890 17 PIMVQIQELVRGA----KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-D-EGLPELRDALV---KKLNQENKL 87 (398)
Q Consensus 17 ~~~~~~~~~~~~g----~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~~~~~~~~~l~---~~l~~~~~~ 87 (398)
+.++++.+..... .....++.|.++...|..+.++..... ....|.+ . ......++.+. +++.+++|+
T Consensus 51 ~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~ 127 (447)
T PRK00451 51 ELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGM 127 (447)
T ss_pred HHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC
Confidence 4555565555332 156678888888877777666553321 1223433 0 11233555555 556888899
Q ss_pred CCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
+.+++.+++|+++++..++.++. .+||+|+++.+.|+.+...++. .|.+++.+ +.+++ .+|++++++.++++
T Consensus 128 ~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~--~~d~~~l~~~i~~~ 204 (447)
T PRK00451 128 DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV-PYEDG--VTDLEALEAAVDDD 204 (447)
T ss_pred CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe-cCCCC--CCCHHHHHHhcCCC
Confidence 88899999999999999988875 7899999999999888776654 68999999 77654 78999999999876
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE--eeceeccCCCccccccCCcEEEEc---ccccccCCCcc
Q 015890 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYFMYDGRKHCCVEGDHVVNLF---SFSKAYGMMGW 237 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv--De~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~ 237 (398)
+ ++|++++| |+||.+.+ +++|+++|+++|+++++ |.+.++.-. .....+.+++++ +++|.++++|+
T Consensus 205 t--~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~---~~~~~~~D~~~~s~~k~~~~~~~~Gp 275 (447)
T PRK00451 205 T--AAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK---PPGEYGADIVVGEGQPLGIPLSFGGP 275 (447)
T ss_pred e--EEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC---CcccCCCCEEEECCCcCCCCCCCCCC
Confidence 5 99999998 89999988 99999999999999998 543322111 111223445555 56666667788
Q ss_pred eeEEEEccCCcHHHHHHHH----------------------------HhhccCCCCcchHHH-HHHHHHhc-CCchHHHH
Q 015890 238 RVGYIAYPSEVEGFATQLL----------------------------KVQDNIPICASIISQ-HLALYSLQ-TGPEWVTE 287 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~~-~~~~~~l~-~~~~~~~~ 287 (398)
++||++++ +++++.+. ........+.+...+ .++..+++ ..+..+++
T Consensus 276 g~G~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~ 352 (447)
T PRK00451 276 YLGFFATR---KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRE 352 (447)
T ss_pred CchHHHhh---HHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHH
Confidence 99999988 67766631 111111112222222 22222333 23466888
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCccEEE--EeeCCCCCCChHHHHHHHHHhcCeEE-ecCCCCC--CCCeEEEEe
Q 015890 288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVV-IPGGACG--CRGHLRISF 362 (398)
Q Consensus 288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~~--~~~~iRi~~ 362 (398)
..+++.++++++.+.|++++++.+. .+.+|. .++++ .+..++.++|+ ++||.+ .++..+. ..+++|+++
T Consensus 353 ~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~---~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~ 426 (447)
T PRK00451 353 LAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLP---KPAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCV 426 (447)
T ss_pred HHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecC---CCHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEec
Confidence 8999999999999999988765665 224443 35553 24678888886 667663 3444332 247899999
Q ss_pred cC-CCHHHHHHHHHHHHHHH
Q 015890 363 GG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 363 ~~-~~~~~~~~~~~~l~~~~ 381 (398)
+. .++++++++++.|.+.+
T Consensus 427 ~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 427 TEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 85 78999999999998653
No 173
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=9.8e-27 Score=218.72 Aligned_cols=289 Identities=17% Similarity=0.154 Sum_probs=205.5
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+....+++.++++. + .+++++++|+++++..++.+++++||+|+++.|.|.++...+ +..|++++.+
T Consensus 81 ~~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~- 153 (427)
T PRK07049 81 NHPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGF- 153 (427)
T ss_pred CCcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEE-
Confidence 4555677888888875 3 456888899999999999999999999999999999987653 5679887777
Q ss_pred cCCCCCCCCChHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEeeceeccCCCccc
Q 015890 142 PCSSKTLHPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA---AGSWLVVDNTYFMYDGRKHC 215 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~---~~~~livDe~~~~~~~~~~~ 215 (398)
+. + .|.+.+++.+++ ...+++|++++|+||||.+++.+++.+|++.|+. +++++|+|++|.......
T Consensus 154 ~~---~--~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-- 226 (427)
T PRK07049 154 AD---G--LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-- 226 (427)
T ss_pred eC---C--CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC--
Confidence 41 1 367777776642 1235999999999999999997777777776543 789999999982211111
Q ss_pred cccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890 216 CVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294 (398)
Q Consensus 216 ~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 294 (398)
....+.++++.|+||.+| .+|+|+||++.+ +++++.+.........+.+++.++++...++. +..+.++..+
T Consensus 227 pl~~g~divv~S~SK~~gG~~glr~G~vv~~---~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t----l~~R~~~~~~ 299 (427)
T PRK07049 227 PLEHGADLSVYSLTKYVGGHSDLVAGAVLGR---KALIRQVRALRSAIGTQLDPHSCWMLGRSLET----LVLRMERANR 299 (427)
T ss_pred ccccCCCEEEEcCceeecCCCCcEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh----HHHHHHHHHH
Confidence 112345688999999998 589999999988 78888888877766777888888888777764 5566677788
Q ss_pred HHHHHHHHhccCCCC-ccccCC------------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC
Q 015890 295 NREIIREALSPLGEG-AVKGGE------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC 352 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~ 352 (398)
++..+.+.|++++.+ +|..|. .+..+.+.+.. ..+...+++++-.+.. .-|...
T Consensus 300 ~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~l~~~~~slG~~~ 375 (427)
T PRK07049 300 NARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG----GQAAAFRFLNALQIFKLAVSLGGTE 375 (427)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC----CHHHHHHHHHcCcccEEcccCCCCC
Confidence 999999999987652 333221 13345556542 2233334444444333 111110
Q ss_pred ----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 353 ----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 353 ----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+ .++.||+|++- |+.+.+++.|.+++.
T Consensus 376 sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 425 (427)
T PRK07049 376 SLASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALD 425 (427)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 0 13579999997 677788888888875
No 174
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=2.3e-26 Score=217.03 Aligned_cols=331 Identities=15% Similarity=0.116 Sum_probs=222.6
Q ss_pred EEcCCccCCCCCcHHHHHHHHHhhc--CCCCCCC--CCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 33 VSLAQGVVYWQPPKMAMEKVKELVW--DPSISKY--GADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 33 ~~l~~g~~~~~~~~~v~~a~~~~~~--~~~~~~y--~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
+.|+.+... ++|+.+++++.+++. +.....+ ....+ ..+..+.+.+.+.+..+.+++++++++|+|++++.++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 556665544 568899999988774 2111101 00001 0123444444555555888889999999999999998
Q ss_pred HHhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 107 LTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 107 ~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
.++. ++||+|+++.++|++....+ +..|++++.+ +.+++ +.+|++.|++.+++++ ++|++++++||||.
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v-~~~~~-g~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~ 159 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-DPQSN-GIIDLEKLEAAMRDDT--ILVSIMHVNNEIGV 159 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE-ccCCC-CcCCHHHHHHhcCCCC--EEEEEECcCCCccc
Confidence 8764 78999999999997765444 3459999988 77654 4689999999998765 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
+.| +++|.++|+++|+++|+|+++ ++....... ..+.++++.|++|.+|++ ++|+++++++ ...++.+.
T Consensus 160 ~~~---~~~I~~la~~~g~~vivD~a~~~g~~~~~~~--~~~~D~~~~s~~K~~gp~--g~G~l~~~~~---~~~~~~~~ 229 (404)
T PRK14012 160 IQD---IAAIGEICRERGIIFHVDAAQSVGKVPIDLS--KLKVDLMSFSAHKIYGPK--GIGALYVRRK---PRVRLEAQ 229 (404)
T ss_pred hhh---HHHHHHHHHHcCCEEEEEcchhcCCcccCcc--cCCCCEEEEehhhccCCC--ceEEEEEecC---CCCCCCce
Confidence 999 899999999999999999999 554322211 223447788999988733 5788887742 11122111
Q ss_pred h-------ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-----CccEEEEeeCCC
Q 015890 259 Q-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLPE 326 (398)
Q Consensus 259 ~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----~~~~~~~~~~~~ 326 (398)
. .....+.+.....++.++++.......+..++.++.++++.+.|++++.+.+... ....++++.+.
T Consensus 230 ~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~- 308 (404)
T PRK14012 230 MHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV- 308 (404)
T ss_pred ecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc-
Confidence 0 0112234455555555555532234555667778888889998887765444321 11234454443
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+..++...| +++.+.+|..|.. .+.||++++. ++++|++++++.|+++++.+.
T Consensus 309 ---~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 309 ---EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred ---CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 234555543 3777777765522 3689999999 899999999999999988763
No 175
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=1.1e-26 Score=220.49 Aligned_cols=336 Identities=18% Similarity=0.147 Sum_probs=228.9
Q ss_pred HcCCCeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|.... -.+|.+.+++.+++.+.. .|. +..+..++++++++++. . .+.|++++|+++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~----~-~~~v~~~~sGseA~ 117 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP----S-VEMVRFVNSGTEAT 117 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC----c-ccEEEEeCCHHHHH
Confidence 4689999999876433 268999999999998743 233 55667788888888762 1 36899999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHh---cCcEEEEeccCCC--------CCC---CCChHHHHHhhccC-CCC
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM---TGVTHILVGPCSS--------KTL---HPDADWLEKTLETK-PTP 165 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~--------~~~---~~d~e~l~~~l~~~-~~~ 165 (398)
+.+++... ...++|+...++|+++...+.. .+...... +... ... ..|++.+++.++.. .++
T Consensus 118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 196 (423)
T TIGR00713 118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL-PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI 196 (423)
T ss_pred HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC-CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence 99998753 2458999999999997643332 11111100 0000 000 12789999988731 235
Q ss_pred eEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEE
Q 015890 166 KLVSVV-NPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 241 (398)
Q Consensus 166 ~~v~i~-~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 241 (398)
++|+++ .++| +|.+.+ ++++++|.++|++||+++|+||+| +.. +........+....+.++||.++ +|+|+||
T Consensus 197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~~~~~~~~~pDi~t~sK~l~-~G~pig~ 273 (423)
T TIGR00713 197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGGAQEYFGVEPDLTTLGKIIG-GGLPVGA 273 (423)
T ss_pred EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-CcchhHHHhCCCcchhhhhhhhc-CCCceee
Confidence 888887 5666 788877 689999999999999999999999 522 21111110111112448999998 8999999
Q ss_pred EEccCCcHHHHHHHHH---hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 242 IAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 242 i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
++++ +++++.+.. .....+++.+++.++++.++|+.. .++.++..+...+.++.+.+.+++++......+.
T Consensus 274 v~~~---~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~- 349 (423)
T TIGR00713 274 FGGR---REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRV- 349 (423)
T ss_pred eeEH---HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee-
Confidence 9999 788888753 223456778999999998888752 2356666777777788888888777653333344
Q ss_pred cEEEEeeCCCCC---------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKH---------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 317 ~~~~~~~~~~~~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+.++.+.+.... .+ ...++..++ ++||.+.++. .+.+|+++. .+++++++++++|.+++.+
T Consensus 350 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 350 GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ----FEACFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC----ccceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 333333332110 01 124666676 7899987542 246889887 4899999999999998865
No 176
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=6.2e-27 Score=217.99 Aligned_cols=317 Identities=16% Similarity=0.097 Sum_probs=222.1
Q ss_pred cCCccCCCCCcHHHHHHHHHhhcCCCCCC----CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-
Q 015890 35 LAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL- 109 (398)
Q Consensus 35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~----y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l- 109 (398)
|+.+.+. ++|+.+++++.+.+....... +.......+..+.+.+.+++.++.++++|++++|+|++++.++.++
T Consensus 3 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~ 81 (364)
T PLN02651 3 LDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVM 81 (364)
T ss_pred ccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 4444433 568999999988774321111 1011222444556666666667888889999999999988887665
Q ss_pred ---ccCCCEEEEeCCCCcChhhH---HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 110 ---CDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 110 ---~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
.++||+|+++...|+++... ++..|++++.+ +.+++ +.+|++++++.+++++ +++++++++|+||.+.|
T Consensus 82 ~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~v~~~~n~tG~~~~- 156 (364)
T PLN02651 82 HFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYL-PVKSD-GLVDLDELAAAIRPDT--ALVSVMAVNNEIGVIQP- 156 (364)
T ss_pred HhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEECCCCCceeccc-
Confidence 36789999999888765433 34568888888 77644 4689999999998765 99999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--- 259 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~--- 259 (398)
+++|.++|+++|+++++|+++ ++..... ....+.++++.|.+|++|++ .+|+++.++ +....+....
T Consensus 157 --l~~I~~~~~~~g~~~~vD~a~~~g~~~~~--~~~~~~D~~~~s~hK~~gp~--G~g~l~v~~---~~~~~l~p~~~g~ 227 (364)
T PLN02651 157 --VEEIGELCREKKVLFHTDAAQAVGKIPVD--VDDLGVDLMSISGHKIYGPK--GVGALYVRR---RPRVRLEPLMSGG 227 (364)
T ss_pred --HHHHHHHHHHcCCEEEEEcchhhCCcccC--cccCCCCEEEechhhhCCCC--ceEEEEEcC---CCCCCCCccccCC
Confidence 899999999999999999999 5543222 22334568889999975544 478888774 2222221111
Q ss_pred ----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc-----cEEEEeeCCCCCC
Q 015890 260 ----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG-----AIYLWARLPEKHL 329 (398)
Q Consensus 260 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~-----~~~~~~~~~~~~~ 329 (398)
.....+.+.+...++.++++......++..++.++..+++.+.|++ +++++++.+.. ...+.+.++. .
T Consensus 228 ~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~--~ 305 (364)
T PLN02651 228 GQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY--V 305 (364)
T ss_pred CccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC--C
Confidence 1235577888888888888763344566778888889999998875 55556665411 2245555552 3
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCK 371 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~ 371 (398)
+..++...|. + |.++.|+.|.. .+.+|+|++. +|++|++
T Consensus 306 ~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 306 EGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 5777787763 4 99999987732 2689999999 7777763
No 177
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.96 E-value=3.1e-26 Score=211.95 Aligned_cols=319 Identities=12% Similarity=0.050 Sum_probs=218.9
Q ss_pred CeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 31 NAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 31 ~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+||-....+.+ .+|+++++++.+...+ |. +..++++++.+++++.+|. +++++++|+|+|+..++.
T Consensus 9 ~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~ 78 (363)
T TIGR01437 9 KVINASGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVA 78 (363)
T ss_pred eEEECCcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHH
Confidence 455554433222 3799999999998643 32 3467888888888888775 478999999999999999
Q ss_pred HhccCCC---------------EEEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 108 TLCDAGD---------------SVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 108 ~l~~~gd---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
+++++|| +|+++.|.|..+ ...+...|++++++ +.+ +.+|++++++++++++ +++
T Consensus 79 al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v-~~~---~~~d~~~le~ai~~~t--~ai 152 (363)
T TIGR01437 79 AVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEA-GYA---NECSAEQLEAAITEKT--AAI 152 (363)
T ss_pred HHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEE-cCC---CCCCHHHHHHhcChhc--eEE
Confidence 9999888 999999777655 46678889999988 552 3589999999999876 655
Q ss_pred E-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 169 S-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 169 ~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
+ +++|+||+|.+.+ +++|+++|+++|+++|+|++| .... .....+.+++++|.||.+ +|++.|+++.+
T Consensus 153 ~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~~----~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~- 222 (363)
T TIGR01437 153 LYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDLQ----KYYRLGADLVIYSGAKAI--EGPTSGLVLGK- 222 (363)
T ss_pred EEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCchH----HHHHcCCCEEEEeCCccc--CCCceEEEEEc-
Confidence 5 6678999999999 888999999999999999999 3221 011112357788999987 47789999887
Q ss_pred CcHHHHHHHHHhhccCC--CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--cc-----
Q 015890 247 EVEGFATQLLKVQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GA----- 317 (398)
Q Consensus 247 ~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~----- 317 (398)
+++++.+........ .........++.++++.......+..+...++++.+.+.|++++++.+..+. .+
T Consensus 223 --~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~ 300 (363)
T TIGR01437 223 --KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIAR 300 (363)
T ss_pred --HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCce
Confidence 677776643322110 1111122233333433211112233334445666799999988775655321 11
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcC--eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+-+.+.......+..++.+.| +++| |.+++ .+...+.+|+++...+++|++.++++|.+.
T Consensus 301 ~~v~~~~~~~g~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 301 AEIRFDESELGMTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred EEEEEeccCCCCCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 122233322234678888877 4667 66665 355678999999887889999999998765
No 178
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.96 E-value=8.1e-26 Score=212.19 Aligned_cols=339 Identities=16% Similarity=0.143 Sum_probs=225.8
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..| ...++ .+|++.+++.+++.+.. ..+.. ...+....+++.+.+..+ .+.+++++++++|+.
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e 106 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLW--HIGNG-YTNEPVLRLAKKLVDATF--ADKVFFCNSGAEANE 106 (397)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc--cccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence 468999999876 33333 58999999999987521 11111 112334455555555444 368999999999999
Q ss_pred HHHHHhc-------cCC-CEEEEeCCCCcChhhHHHh-cCcEEEE--eccCCCC--C-CCCChHHHHHhhccCCCCeEEE
Q 015890 104 NIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQM-TGVTHIL--VGPCSSK--T-LHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 104 ~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~-~g~~~~~--~~~~~~~--~-~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.+++.+. ++| ++|+..+.+|++.....-. .+..... +.|.... . ...|++.+++.++++ +++|+
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi 184 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDK--TCAVI 184 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccC--eEEEE
Confidence 9999863 123 6789999999887543322 2211100 0011100 0 013789999999754 58999
Q ss_pred EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 170 i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
++.++++.|... +++.+++|.++|++||+++|+||+| +++.|........+....+.+++|.++ +|+++||++++
T Consensus 185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lg-gG~pigav~~~- 262 (397)
T TIGR03246 185 VEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALG-GGFPIGAMLTT- 262 (397)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhh-CCcceeEEEEc-
Confidence 997677777654 7899999999999999999999999 655554322211122233448899998 89999999999
Q ss_pred CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccccCCccEEEEe
Q 015890 247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVKGGEGAIYLWA 322 (398)
Q Consensus 247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~ 322 (398)
+++++.+.......+++.+++.++++.++|+... .++..++++++.+++.+.|++++ .+....+. +.++.+
T Consensus 263 --~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i 337 (397)
T TIGR03246 263 --TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGA 337 (397)
T ss_pred --HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEE
Confidence 7888777654444567778888888888887521 13445666666666766665533 22223344 455555
Q ss_pred eCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 323 ~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+.... .....++..|+ ++||.+.+. .++++|++++. .+++++++++++|.+++.++
T Consensus 338 ~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 338 VLTEAYQGKAKQFVNAAA-EEGVIALIA----GPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred EEcCchhhHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 553211 13556777665 789998764 24789998766 79999999999999988764
No 179
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.96 E-value=2.2e-26 Score=217.32 Aligned_cols=345 Identities=12% Similarity=0.034 Sum_probs=228.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+.....+. ....+.+..+++.+.+..+. ..+.+++++++++|+
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~ 107 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM--VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAV 107 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc--ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 4789999998874 3333 5899999999998764222221 11123344556655554432 235799999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCC-CC---------CCCChHHHH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS-KT---------LHPDADWLE 156 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~---------~~~d~e~l~ 156 (398)
+.+++... ....+|+....+|++....+... +- .+..+ +.+. .. +.-+++.++
T Consensus 108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (420)
T TIGR00700 108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRA-PLPYPYRDGLLDKQLSTDGELAAAR 186 (420)
T ss_pred HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccchhHHHHHHHHH
Confidence 99998764 22357999999999976543322 10 11112 1110 00 000245666
Q ss_pred Hhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890 157 KTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK 230 (398)
Q Consensus 157 ~~l~---~~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK 230 (398)
+.+. ....+++|+++..+..+|..+ +++.+++|.++|++||+++|+||+| +.+.+........+....+.++||
T Consensus 187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK 266 (420)
T TIGR00700 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAK 266 (420)
T ss_pred HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeec
Confidence 6653 233478999987788888865 5556999999999999999999999 766664322222222333557999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
.++ +|+|+||++++ +++++.+.......+++.++++++++.++|+. . ....+...+...+.++.+.+..++++.
T Consensus 267 ~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~ 342 (420)
T TIGR00700 267 SLA-DGLPLSGVTGR---AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPR 342 (420)
T ss_pred ccc-CCcceEEEEec---HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 998 99999999999 78888776555566788899999999888764 1 233333333444445555555555665
Q ss_pred CccccCCccEEEEeeCCCCC--CC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKH--LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+..+.+. |.++++.+.+.. .. ...+...+ .++||.+.|+..| .++||++++. .+++++++++++|.+++
T Consensus 343 ~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 343 IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 4455566 777777763210 01 23344444 4899999998755 3789999876 78999999999999887
Q ss_pred H
Q 015890 382 E 382 (398)
Q Consensus 382 ~ 382 (398)
+
T Consensus 419 ~ 419 (420)
T TIGR00700 419 A 419 (420)
T ss_pred h
Confidence 4
No 180
>PLN00144 acetylornithine transaminase
Probab=99.96 E-value=3.2e-26 Score=213.18 Aligned_cols=340 Identities=16% Similarity=0.125 Sum_probs=231.7
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.. .+ ......+....+++.+.+..+ .+.+++++++++|++
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~-~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e 86 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA--HV-SNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANE 86 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC--Cc-cccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHH
Confidence 4789999998764 3333 58999999999987632 11 111123445566666655433 468999999999999
Q ss_pred HHHHHhcc---C------------CCEEEEeCCCCcChhhHHHhcCcEEE---EeccCCCCC---CCCChHHHHHhhccC
Q 015890 104 NIVLTLCD---A------------GDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSKT---LHPDADWLEKTLETK 162 (398)
Q Consensus 104 ~~~~~l~~---~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~~~---~~~d~e~l~~~l~~~ 162 (398)
.+++.... . ..+|+....+|++....+........ .+.+..... ...|++.+++.+..+
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 166 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG 166 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 99997531 0 24799999999997755443322110 000111100 012789999888654
Q ss_pred CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee
Q 015890 163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV 239 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (398)
. +++|+++..+||.|.. ++.+.+++|.++|++||+++|+||+| +++.+........+....+.+++|.++ +|+|+
T Consensus 167 ~-~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~-~G~pi 244 (382)
T PLN00144 167 K-TAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLA-GGLPI 244 (382)
T ss_pred C-eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEeccccc-CCcce
Confidence 3 7888888668995553 35666999999999999999999999 666664322111111122668999997 89999
Q ss_pred EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 240 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 240 G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
||++.+ +++.+.+.......+++.++..++++.+.|+.. .+..++..+.-+..++.+.+.+.+.+.+.-+.. .|
T Consensus 245 g~v~~~---~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G 320 (382)
T PLN00144 245 GAVLVT---EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VG 320 (382)
T ss_pred EEEEEc---HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeec-Cc
Confidence 999999 788887765555567788999999999666542 233333333333345566666666654323334 48
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+++|+.+.. ....++..+. ++||.+.|+. ..+.||++++. ++++++++++++|.+++.++
T Consensus 321 ~~~~l~l~~---~~~~~~~~~~-~~Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 321 LLVGIQLDV---PAGPLVDACR-DSGLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eEEEEEecC---ccHHHHHHHH-HCCeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 999999842 3456777664 8999998863 24889999998 89999999999999998754
No 181
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.96 E-value=5.1e-26 Score=214.34 Aligned_cols=344 Identities=13% Similarity=0.113 Sum_probs=228.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+.....+ .....+....+++.+.+..+. ..+.+++++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~ 114 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY--QIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc--CccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHH
Confidence 4789999998764 3233 589999999999876322112 112234445666666554432 235789999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCC--CCCCC--CChHHHHHhhcc-
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS--SKTLH--PDADWLEKTLET- 161 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~~~~--~d~e~l~~~l~~- 161 (398)
+.+++... ....+|+....+|++....+... |. .+..+ |.+ ..+.. -+++.+++.++.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK09792 115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHV-PYPSDLHGISTQDSLDAIERLFKSD 193 (421)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHhc
Confidence 99999865 22358999999999876433222 11 11222 221 11110 134778888762
Q ss_pred --CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 162 --KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 162 --~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
...+++|+++..++++|... |++.+++|.++|++||+++|+||++ +++.|........+....+.+++|.++ +|
T Consensus 194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~-~G 272 (421)
T PRK09792 194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLA-GG 272 (421)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhc-CC
Confidence 23478999997799999865 8999999999999999999999999 766664332221112223568999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
+++||++++ +++.+.+.......+++.++..++++.+.++.. .+.+++..+.-.+..+.+.+..++.+.+ ...
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v--~~v 347 (421)
T PRK09792 273 MPLSGVVGN---ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAI--AAV 347 (421)
T ss_pred CceEEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCc--cee
Confidence 999999998 788877755555567788999999777777642 2333333333333344444443445542 334
Q ss_pred Cc-cEEEEeeCCCCC------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 315 EG-AIYLWARLPEKH------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 315 ~~-~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.+ |.++++.+++.. .....++..++ ++||.+.+... ..+.||+.++. ++++++++++++|.+++.
T Consensus 348 rG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 348 RGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred cccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 44 899999986431 12345666665 79999964221 25789999888 899999999999998874
No 182
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-25 Score=212.68 Aligned_cols=354 Identities=14% Similarity=0.112 Sum_probs=231.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+.. .+.......+.+..+++.|....+..-+.++++++|++|++
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve 115 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDAND 115 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHH
Confidence 4689999998873 4443 58999999999987632 22222222345566677666655433357999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cCc------------EEEEeccCCCC-C--CC--------CChHHHHH
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK-T--LH--------PDADWLEK 157 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~-~--~~--------~d~e~l~~ 157 (398)
.+++... ....+|+....+|++....+-. .|. .+..+ +.+.. . +. .+++.+++
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK08360 116 GAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYI-PYPDCYRCPFGKEPGSCKMECVEYIKE 194 (443)
T ss_pred HHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEE-eCCccccccccCchhhhHHHHHHHHHH
Confidence 9999764 2336888899999886533222 121 11222 11110 0 00 12455666
Q ss_pred hhcc---CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890 158 TLET---KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 158 ~l~~---~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~ 231 (398)
.++. ..++++|+++..+||+|.+++ +++++++.++|++||+++|+||+| +++.|........+....+.++||.
T Consensus 195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~ 274 (443)
T PRK08360 195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKP 274 (443)
T ss_pred HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEeccc
Confidence 6642 234789999877899999776 568999999999999999999999 6666643221111111112377999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
++ +|+|+||++++ +++++.+.......+++.++..++++.++|+.. .+..++..+.....++.+.+...+.+.+
T Consensus 275 l~-~G~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v 350 (443)
T PRK08360 275 LG-GGLPISATIGR---AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELI 350 (443)
T ss_pred cc-CCceeEEEEEc---HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 98 89999999998 788888765545567778888898988888752 2333333444444445554444445543
Q ss_pred ccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
....+. +.++.+.+.... .....+...++ ++||.+.+. ..+.+|++++. .+++++++++++|.+++
T Consensus 351 ~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lr~~P~l~~t~~~id~~~~~l~~~l 424 (443)
T PRK08360 351 GDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF----SGNVLRIQPPLTIEKEVLDEGLDILEEAI 424 (443)
T ss_pred eeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 334455 666666663211 01235566654 899998653 24789998777 79999999999999999
Q ss_pred HHHhccccccccc
Q 015890 382 EELVKDGMVQEHV 394 (398)
Q Consensus 382 ~~~~~~~~~~~~~ 394 (398)
.++.+ +++-+++
T Consensus 425 ~~~~~-~~~~~~~ 436 (443)
T PRK08360 425 EDVEE-GKVPDEV 436 (443)
T ss_pred HHHHh-ccCCHHH
Confidence 98754 4554444
No 183
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.96 E-value=1e-25 Score=214.43 Aligned_cols=352 Identities=13% Similarity=0.104 Sum_probs=225.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ -+|.+.+++.+++.+.... .......+.+..+++.+....+... +.++++++|++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~ 128 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAV 128 (451)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHH
Confidence 4688899998775 2333 5899999999998763211 1111123455666666665544222 5899999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC-C--CCCCC--------hHHH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-K--TLHPD--------ADWL 155 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-~--~~~~d--------~e~l 155 (398)
+.+++... ....+|+....+|++....+..... .+..+ |.+. . ..... ++.+
T Consensus 129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (451)
T PRK06918 129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKA-PFPYEYRRPEGLTEEQYDDFMIEEF 207 (451)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEc-CCCccccccccCchHHHHHHHHHHH
Confidence 99999764 2336799999999997754433211 11112 1110 0 00000 1234
Q ss_pred HHhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890 156 EKTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS 229 (398)
Q Consensus 156 ~~~l~---~~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s 229 (398)
++.+. ....+.+|+++..+...|.++ +.+.+++|.++|++||+++|.||+| +.+.+........+....+.|+|
T Consensus 208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~s 287 (451)
T PRK06918 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVS 287 (451)
T ss_pred HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeee
Confidence 43331 122367888886666667754 5666999999999999999999999 66666433222222222355899
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHH-HHHHHHHHHHHHHhccCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERV-KDLVRNREIIREALSPLG 307 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~l~~~l~~~~ 307 (398)
|.++ +|+|+||++++ +++++.+.......+++.++..++++.+.++.. ++.+.+.. +.-...++.+.+..++++
T Consensus 288 K~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~ 363 (451)
T PRK06918 288 KSLG-AGVPISGVIGR---KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN 363 (451)
T ss_pred hhhc-CCCccEEEEEc---HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9998 89999999999 788887765555667888999999988888642 12222222 222333444444444454
Q ss_pred CCccccCCccEEEEeeCCCC--CC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 308 EGAVKGGEGAIYLWARLPEK--HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
.+..+.+.|.++.|....+. .. ....+...+ .++||.+.++..| .+++|++++. .+++++++++++|.++
T Consensus 364 ~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~~~ 440 (451)
T PRK06918 364 CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIEES 440 (451)
T ss_pred CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 43344566566655443110 01 123344444 5899999997654 3789999976 7899999999999999
Q ss_pred HHHHhccc
Q 015890 381 LEELVKDG 388 (398)
Q Consensus 381 ~~~~~~~~ 388 (398)
++++.++.
T Consensus 441 l~~~~~~~ 448 (451)
T PRK06918 441 LQACYEKA 448 (451)
T ss_pred HHHHHHhh
Confidence 99886654
No 184
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=5.2e-26 Score=212.46 Aligned_cols=331 Identities=14% Similarity=0.122 Sum_probs=218.6
Q ss_pred EcCCcc-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 34 SLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 34 ~l~~g~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
+|+.++ -.+..+|++.+++.+++.+.. ...|+......++++++++++ +. .+.+++++|. .++..++
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~-e~al~~~sG~-~a~~~~i 75 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GT-ESAILYSDGA-STTSSTV 75 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CC-CcEEEecCcH-HHHHHHH
Confidence 344443 233468899999888876511 223555556677888888877 43 2455555555 5556888
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc---------CCCCeEEEEeCCCCCC
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---------KPTPKLVSVVNPGNPS 177 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---------~~~~~~v~i~~p~npt 177 (398)
.+++++||.|+++++.|.+....++..+.+++.+ +..+. -+++.+.+.++. .+.+++|++++++||+
T Consensus 76 ~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~-~~~d~---~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~ 151 (392)
T PLN03227 76 AAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWF-RHNDM---KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNT 151 (392)
T ss_pred HHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEe-CCCCH---HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCC
Confidence 8899999999999999999888777777777766 32210 133443334431 1235889999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC---cccc---c--cCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR---KHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~---~~~~---~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
|.+.| ++++.++|++||+++|+||+| ++..|. .... . ..+.++++.|+||.+|+. .|+++++
T Consensus 152 G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v~~~--- 222 (392)
T PLN03227 152 GTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMTVGS--- 222 (392)
T ss_pred CcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEEecC---
Confidence 99999 889999999999999999999 554332 1110 0 123478899999988644 4888888
Q ss_pred HHHHHHHHHhhccCCCCc--chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc---------ccCCcc
Q 015890 249 EGFATQLLKVQDNIPICA--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV---------KGGEGA 317 (398)
Q Consensus 249 ~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------~~~~~~ 317 (398)
+++++.+........++. +++.++++.+++..... .++..++++++.+++++.|++.+...+ .....+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~ 301 (392)
T PLN03227 223 EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPIS 301 (392)
T ss_pred HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCC
Confidence 777776654433333443 35566666666643111 245666778888888888864322111 111225
Q ss_pred EEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCC-------CCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGG-------ACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 318 ~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~-------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+++.+.+...... ..++++.++ ++|+.+.+.. .+..+..||++++. .+++|+++++++|++++
T Consensus 302 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 302 PIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred CEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 6666776431100 136666665 8899996532 12346789999999 89999999999999999
Q ss_pred HHHh
Q 015890 382 EELV 385 (398)
Q Consensus 382 ~~~~ 385 (398)
+++.
T Consensus 381 ~~~~ 384 (392)
T PLN03227 381 EAIL 384 (392)
T ss_pred HHHH
Confidence 8875
No 185
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.96 E-value=5.3e-26 Score=212.80 Aligned_cols=287 Identities=20% Similarity=0.206 Sum_probs=202.9
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 141 (398)
+.+...+++++++++.+ . +++++++|+++|+..++.+++++||+|+++.|.|..... .++..|++++.+
T Consensus 62 ~~p~~~~Le~~iA~~~g----~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v- 134 (400)
T PRK06234 62 GNPTSTEVENKLALLEG----G--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV- 134 (400)
T ss_pred CCccHHHHHHHHHHHhC----C--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEE-
Confidence 67888999999999873 2 467888889999999999999999999999999976443 346789999888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeece-eccCCCcccccc
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTY-FMYDGRKHCCVE 218 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~~-~~~~~~~~~~~~ 218 (398)
+.. |++++++.+++++ ++|++++|+||||.+.+ +++|.++|+++ |+++|+|++| .++...+. .
T Consensus 135 d~~------d~e~l~~~i~~~t--klI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~~l---~ 200 (400)
T PRK06234 135 DTS------NLEEVRNALKANT--KVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQRPL---Q 200 (400)
T ss_pred CCC------CHHHHHHHhccCC--eEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCCch---h
Confidence 432 7899999998765 99999999999999999 99999999997 9999999999 44322221 2
Q ss_pred CCcEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 015890 219 GDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 295 (398)
Q Consensus 219 ~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 295 (398)
.+.++++.|++|.++.+|.++ ||++++ +++++.++.. ....+.+.++...+.+...++. +..+.++..++
T Consensus 201 ~g~Divv~S~sK~l~g~g~~~gG~v~~~---~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----l~~r~~~~~~n 273 (400)
T PRK06234 201 LGADVVVHSATKYLNGHGDVIAGFVVGK---EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----LQIRMEKHCKN 273 (400)
T ss_pred hCCcEEEeeccccccCCCCceeEEEEec---HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHH
Confidence 245689999999998778764 899988 6777777542 2233456666666666666654 44555666677
Q ss_pred HHHHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----
Q 015890 296 REIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----- 353 (398)
Q Consensus 296 ~~~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----- 353 (398)
..++.+.|++++.+ +++.|. .+..+.+++.........+++.| +-.++.+.-|....
T Consensus 274 a~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p 352 (400)
T PRK06234 274 AMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNV-KLATLAVSLGDAETLIQHP 352 (400)
T ss_pred HHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhC-CcceEeccCCCCCceecCC
Confidence 88888888876643 222111 13345666653211233444433 23333333332110
Q ss_pred ------------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 354 ------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 354 ------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++.||+|++- |+.+.+++.|.+++..+
T Consensus 353 ~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 353 ASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDLI 398 (400)
T ss_pred ccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHH
Confidence 13679999997 67778888888888764
No 186
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=2e-25 Score=208.87 Aligned_cols=345 Identities=14% Similarity=0.146 Sum_probs=229.7
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+. ..++. ....+....+++.+....+. .+.+++++|+++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~--~~~~~-~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e 112 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL--WHTSN-VFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANE 112 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhc--ccccc-ccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHH
Confidence 4789999998774 3333 5899999999998763 12212 12234455666666554332 268999999999999
Q ss_pred HHHHHhcc----C----C-CEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC---CCCCChHHHHHhhccCCCCeEE
Q 015890 104 NIVLTLCD----A----G-DSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK---TLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 104 ~~~~~l~~----~----g-d~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~---~~~~d~e~l~~~l~~~~~~~~v 168 (398)
.+++.... . + .+|+....+|++....+-.. |..... +.+.... --..|++.+++.++.++ +++|
T Consensus 113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~aav 191 (408)
T PRK04612 113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGD-VAAV 191 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCC-EEEE
Confidence 99987642 1 2 46999999999976544332 211100 1011111 01137889999887544 4555
Q ss_pred EEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 169 SVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 169 ~i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
+++ |.+++|.++ +++++++|.++|++||+++|+||+| +++.|........+..+.+.+++|.++ +|+++|+++.
T Consensus 192 i~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~-~G~piga~~~ 269 (408)
T PRK04612 192 MLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG-GGFPIGAMLA 269 (408)
T ss_pred EEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc-CCCceEEEEE
Confidence 555 555566543 3679999999999999999999999 666664333223345567889999998 8999999998
Q ss_pred cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322 (398)
Q Consensus 245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 322 (398)
+ +++.+.+.......+++.+++.++++.+.|+... +..++..+.....++.+.+..++.+.+....+. |.++.+
T Consensus 270 ~---~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~~i 345 (408)
T PRK04612 270 G---PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLMLGA 345 (408)
T ss_pred C---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEEEE
Confidence 8 6777777655555677889999999999987522 222333333333344444433445544445566 666666
Q ss_pred eCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 323 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 323 ~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+... .....+++..+ .++||++.+. .++.+|+.+.. .+++++++++++|.+++.++.++
T Consensus 346 ~~~~~~~~~a~~i~~~l-~~~Gvlv~~~----g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~~ 407 (408)
T PRK04612 346 VLAPAHAGQAGAILDLA-AEHGLLLLQA----GPDVLRFVPALNLTDAELADGLARLRLALADYVAQ 407 (408)
T ss_pred EecCchhhHHHHHHHHH-HHCCeEEeeC----CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 66421 11244566655 5899999774 34789999877 79999999999999999887643
No 187
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=211.29 Aligned_cols=344 Identities=13% Similarity=0.104 Sum_probs=225.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.....+. ....+....+++.+....+. ..+.+++++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~ 114 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQ--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccc--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHH
Confidence 4689999998764 2333 5899999999998763222121 11123344555666554432 245799999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-CcE-------------EEEeccCCCCCC----CCChHHHHHhhcc-
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GVT-------------HILVGPCSSKTL----HPDADWLEKTLET- 161 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~d~e~l~~~l~~- 161 (398)
+.+++... ....+|+....+|++....+... +.. +..+ +.+.... ..+++.+++.++.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK06777 115 ENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHA-LYPNELHGVSVEEALSSVERLFKAD 193 (421)
T ss_pred HHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCccccCcCHHHHHHHHHHHHHhc
Confidence 99999764 22357999999999977544322 210 1111 1111000 1135667777752
Q ss_pred --CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 162 --KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 162 --~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
...+++|+++..++..|. +++++.+++|.++|++||+++|+||+| +++.|........+....+.+++|.++ +|
T Consensus 194 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~-~G 272 (421)
T PRK06777 194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLG-GG 272 (421)
T ss_pred cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhc-CC
Confidence 234788888877888886 578999999999999999999999999 766664322222221222347999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCCCccc
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVK 312 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~ 312 (398)
+|+||++++ +++++.+.......+++.++..++++.++|+..++ ++..++.+++.+++.+.|+ +.+.+..+
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 347 (421)
T PRK06777 273 MPISAVVGR---AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKAKASCPAIVDI 347 (421)
T ss_pred CceEEEEEc---HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 999999999 78888776555556788899999999999974221 2334444444455544444 34554556
Q ss_pred cCCccEEEEeeCCCC--CCChHHHHHHH---HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEK--HLDDFEVVRWL---AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~--~~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.+.|.++ .+.+... .....++...+ +.++||.+.|+..+ .+++||++.. .+++++++++++|.+++.
T Consensus 348 rg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 348 RARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred cCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 6775554 4433221 11122333322 34799999997654 3689999865 799999999999998863
No 188
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=7e-26 Score=211.65 Aligned_cols=314 Identities=20% Similarity=0.207 Sum_probs=229.4
Q ss_pred CCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHh---ccCCC
Q 015890 43 QPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL---CDAGD 114 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l---~~~gd 114 (398)
+.|+.+++++.+.+.+... ..+.......+..+.+.+.++++.|.++ ++|++++|+|.+++.++.++ .++|+
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~ 89 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGD 89 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTC
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccc
Confidence 4689999999988653211 1222233335555555555666668887 89999999999999999999 68999
Q ss_pred EEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 115 SVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 115 ~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
+|++...+|++.. ...+..|+++..+ +.+.++ .+|++++++.+++++ ++|++++.+|.||...| +++|.
T Consensus 90 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i-~~~~~~-~~~~~~~~~~l~~~~--~lv~~~~~~~~tG~~~p---i~~I~ 162 (371)
T PF00266_consen 90 EVLVTSNEHPSNRYPWEEIAKRKGAEVRVI-PADPGG-SLDLEDLEEALNPDT--RLVSISHVENSTGVRNP---IEEIA 162 (371)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTTEEEEEE-EEGTTS-SCSHHHHHHHHHTTE--SEEEEESBETTTTBBSS---HHHHH
T ss_pred ccccccccccccccccccccccchhhhccc-cccccc-hhhhhhhhhhhcccc--ceEEeecccccccEEee---eceeh
Confidence 9999999997755 4445779999888 776554 679999999998654 99999999999999999 99999
Q ss_pred HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------
Q 015890 191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-------- 261 (398)
Q Consensus 191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-------- 261 (398)
++|+++|+++++|.++ ++...... ...+.+++++|.+|.+|++| +|+++++ ++.++++......
T Consensus 163 ~~~~~~~~~~~vD~~~~~g~~~id~--~~~~~D~~~~s~~Kl~gp~G--~g~l~v~---~~~~~~~~p~~~~~~~~~~~~ 235 (371)
T PF00266_consen 163 KLAHEYGALLVVDAAQSAGCVPIDL--DELGADFLVFSSHKLGGPPG--LGFLYVR---PEAIERLRPAKPGGGYLDFPS 235 (371)
T ss_dssp HHHHHTTSEEEEE-TTTTTTSS--T--TTTTESEEEEESTSTTSSST--EEEEEEE---HHHHHHHHTSSSSSSTTTHHH
T ss_pred hhhhccCCceeEechhccccccccc--cccccceeeecccccCCCCc--hhhheeh---hhhhhcccccccccccccccc
Confidence 9999999999999999 66543332 22345588999999555555 6999999 7777777432221
Q ss_pred -------------CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccEEEEee
Q 015890 262 -------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWAR 323 (398)
Q Consensus 262 -------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~ 323 (398)
...+.+.+...++..+++.. ...+++..++..++.+++.+.|++++.+.+..+ ..+..+.+.
T Consensus 236 ~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~ 315 (371)
T PF00266_consen 236 LQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFN 315 (371)
T ss_dssp HHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEE
T ss_pred chhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEe
Confidence 12356777777777777653 234677778888899999999999888666442 223455556
Q ss_pred CCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHH
Q 015890 324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA 373 (398)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~ 373 (398)
++. .+..++...|. ++||.+..|..|. ..+.||+|++. .+++|++++
T Consensus 316 ~~~--~~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 316 LPG--SDADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp ETT--SSHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ecC--CCHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 643 35777777765 6699999988775 35899999999 889998864
No 189
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-25 Score=208.03 Aligned_cols=348 Identities=14% Similarity=0.076 Sum_probs=228.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +.......+....+++.+.+..+-. .+.+++++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~ 114 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAV 114 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 4689999998774 2333 589999999999876321 1111122334455666665544322 25799999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCC--CCCCC--CChHHHHHhhc--
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS--SKTLH--PDADWLEKTLE-- 160 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~~~~--~d~e~l~~~l~-- 160 (398)
+.+++... ....+|+....+|++........ |. .+..+ |.+ ..+.. -+++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHV-PFPVELHGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEe-cCCcccccccHHHHHHHHHHHHHhc
Confidence 99999764 22368999999999876433221 10 12222 222 11111 11455576664
Q ss_pred -cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 161 -TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
...++++|+++..+..+|. .+|++.+++|.++|++||+++|+||+| ++..|........+....+.+++|.++ +|
T Consensus 194 ~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G 272 (425)
T PRK07495 194 VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GG 272 (425)
T ss_pred cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CC
Confidence 2234788888865555885 578999999999999999999999999 666664333333344556789999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
+++|+++++ +++.+.+.......+++.+++.++++.+.++... +..++..+.-.+.++.+.+..++.+.+.-+..
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 349 (425)
T PRK07495 273 FPLAAVTGR---AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRG 349 (425)
T ss_pred ccceEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 999999999 7887777554455677889999998888776521 22233333333334444444444554333334
Q ss_pred CccEEEEeeCCCCCC---C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 315 EGAIYLWARLPEKHL---D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
. |.++++.+.+... + ...++..+ .++|+.+.+... ..+.+||.+.- .+++++++++++|.++++++.
T Consensus 350 ~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 350 P-GFMNAVEFNDADSGLPSAEFANRVRLKA-LEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred C-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 5 8889998853210 1 23455555 489999976421 14789999777 799999999999999998764
No 190
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.9e-25 Score=195.20 Aligned_cols=343 Identities=22% Similarity=0.228 Sum_probs=253.6
Q ss_pred HHHHHHHHH--cCCCeEEcCCcc--CCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC---
Q 015890 19 MVQIQELVR--GAKNAVSLAQGV--VYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--- 88 (398)
Q Consensus 19 ~~~~~~~~~--~g~~~~~l~~g~--~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--- 88 (398)
+..+.+.+. ...+-|||+.|. +.. +.-+.|.+|-+..........|-+..|.+++.+.+++.+ +|.+
T Consensus 13 IlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~ 89 (396)
T COG1448 13 ILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---FGADSPA 89 (396)
T ss_pred hhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---cCCCcHH
Confidence 333444443 346799999986 222 344667777776666666788989999999999999987 3432
Q ss_pred --CCc--EEEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 89 --KSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 89 --~~~--v~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
.+. -+=|.|||.|+......+- .+..+|++++|+|+++...+...|+++..++-.|..+..+|.+.+-+.|+.-
T Consensus 90 l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a 169 (396)
T COG1448 90 LAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA 169 (396)
T ss_pred HHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC
Confidence 222 2346899999999888774 4556799999999999999999999998883445555568999999988855
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccC-CCcc-------ccccCCcEEEEcccccccC
Q 015890 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYD-GRKH-------CCVEGDHVVNLFSFSKAYG 233 (398)
Q Consensus 163 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~-~~~~-------~~~~~~~~i~~~s~sK~~~ 233 (398)
+...+|++. ..|||||.-++.+++.+|+++.++.|.+.++|-+|.+|. |... ........+++.|+||.||
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 544667666 459999999999999999999999999999999994442 2111 1112334788999999999
Q ss_pred CCcceeEEE--EccCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCCc---h---HHHHHHHHHHHHHHHHHH
Q 015890 234 MMGWRVGYI--AYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTGP---E---WVTERVKDLVRNREIIRE 301 (398)
Q Consensus 234 ~~G~r~G~i--~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~---~~~~~~~~~~~~~~~l~~ 301 (398)
+-|-|+|++ ++.+ .+.+.+ +.........+++......+...|.+.+ + .+..+++++.+.|..+.+
T Consensus 250 LYgERVGa~~vva~~--~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~ 327 (396)
T COG1448 250 LYGERVGALSVVAED--AEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVD 327 (396)
T ss_pred hhhhccceeEEEeCC--HHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999974 3443 444433 3334444556677777777777777511 2 346677888888889999
Q ss_pred HhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 015890 302 ALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR 378 (398)
Q Consensus 302 ~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 378 (398)
.|+..+. +..+..+.|+|.+..+. .+.+.+|.+++||++..+. |||++..++..++.+++.|.
T Consensus 328 ~L~~~~~~~~f~~i~~Q~GMFsy~Gls------~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~ 393 (396)
T COG1448 328 ALKALGAPRNFDFIISQRGMFSYTGLS------PEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIA 393 (396)
T ss_pred HHHhhCCCcccchHhhcCceeecCCCC------HHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHH
Confidence 9887432 45666777998886553 4667789899999998754 99999988999999988887
Q ss_pred HH
Q 015890 379 RG 380 (398)
Q Consensus 379 ~~ 380 (398)
++
T Consensus 394 ~v 395 (396)
T COG1448 394 AV 395 (396)
T ss_pred hh
Confidence 65
No 191
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=3.7e-25 Score=211.09 Aligned_cols=343 Identities=13% Similarity=0.115 Sum_probs=221.4
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|..... .+|.+.+++.+++.+..... . ....+....+++.+.+.++ .+.++++++|++|++
T Consensus 72 ~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~--~-~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e 146 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSS--R-AFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVE 146 (474)
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcc--c-ccCCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHH
Confidence 45788999987754333 38999999999997633221 1 1112333445555554444 357999999999999
Q ss_pred HHHHHhcc---------CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhcc-CCCCe
Q 015890 104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLET-KPTPK 166 (398)
Q Consensus 104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~-~~~~~ 166 (398)
.+++.... ++ ..|+....+|++....+-....+... +.|....- ...|++.+++.++. ...++
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ia 226 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIA 226 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEE
Confidence 99986542 12 35888888998876444332211100 00110000 01268889998863 23478
Q ss_pred EEEEeCCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 167 LVSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~-~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
+|+++.++|++|.+++++ ++++|.++|++||+++|+||+| +++.|........+....+.+++|.+|.+++++|+++
T Consensus 227 aiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~ 306 (474)
T PLN02624 227 AFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVL 306 (474)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeee
Confidence 899999999999987666 6999999999999999999999 6555543222111111223357899986669999999
Q ss_pred ccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCC-CccccCCccE
Q 015890 244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGE-GAVKGGEGAI 318 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~-~~~~~~~~~~ 318 (398)
.+ +++++.+.......+++.++..++++.++|+...+ .+..+...++.+.+++.|+ +++. +....+. +.
T Consensus 307 ~~---~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G~ 380 (474)
T PLN02624 307 AD---KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-GL 380 (474)
T ss_pred ec---HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEee-EE
Confidence 98 67777766555555667888999999988875211 1122233333333333333 2332 2223345 45
Q ss_pred EEEeeCCCCC---CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 319 YLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 319 ~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
++.+.+.... ....++++.| .++||++.|+ .++.|||+++. .+++++++++++|.+++++..
T Consensus 381 ~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~----~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 381 LNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPT----HDTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred EEEEEecCCCcChHHHHHHHHHH-HhCCeEEecC----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 5555554321 1245677776 5899999886 36789999765 799999999999999986654
No 192
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=2.2e-25 Score=208.83 Aligned_cols=285 Identities=17% Similarity=0.185 Sum_probs=199.9
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-----HhcCcEEEEec
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVG 141 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~ 141 (398)
.+...++++.++++. | .+.+++++|+++|+..++.+++++||+|+++.|.|.++...+ +..|.+++.+
T Consensus 75 ~Pt~~~LE~~lA~l~----g--~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~- 147 (418)
T PLN02242 75 NPTVLNLGRQMAALE----G--TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV- 147 (418)
T ss_pred ChhHHHHHHHHHHHh----C--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc-
Confidence 455566777777765 4 355778999999999999999999999999999998776554 3477787766
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG 219 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~ 219 (398)
+. .|++.++++++++. +++|++++|+||||.+.+ +++|+++|+++|+++|+|++| +.+.. ...
T Consensus 148 d~------~d~e~l~~~i~~~~-tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~-----~~~ 212 (418)
T PLN02242 148 DI------TDLEAVKKAVVPGK-TKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP-----ARL 212 (418)
T ss_pred CC------CCHHHHHHhcCcCC-CEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH-----HHc
Confidence 33 27899999998642 499999999999999998 999999999999999999999 33321 112
Q ss_pred CcEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890 220 DHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296 (398)
Q Consensus 220 ~~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (398)
+.++++.|+||.++.+|.+ .||++++ +++++.+...... ...+.+...+.+...++.. ..+..+.+++.+++
T Consensus 213 g~divv~S~SK~l~g~g~~~gG~iv~~---~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l--~tl~~r~~~~~~~a 287 (418)
T PLN02242 213 GADVVVHSISKFISGGADIIAGAVCGP---AELVNSMMDLHHGALMLLGPTMNPKVAFELSERL--PHLSLRMKEHCRRA 287 (418)
T ss_pred CCcEEEEeCccccCCCCCceEEEEEcC---HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC--CcHHHHHHHHHHHH
Confidence 3568899999999878877 5899988 7888888766442 2344455566665555543 34566777889999
Q ss_pred HHHHHHhccCCCCccccCC-------------------ccEEEEeeCCCCCCChHHHHHHHHHhc----CeEEecCCCCC
Q 015890 297 EIIREALSPLGEGAVKGGE-------------------GAIYLWARLPEKHLDDFEVVRWLAHRH----GVVVIPGGACG 353 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~----gi~v~~g~~~~ 353 (398)
+.+.+.|++++. ++..|. .+-.+.+.+. .......+++.+ +-- .+.+.-|..-.
T Consensus 288 ~~la~~L~~~~~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l-~~~~~~~~~~~slG~~~s 364 (418)
T PLN02242 288 MEYAKRMKELGL-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD-TEERANRLMRYL-QNSTQFGFMAVSLGYYET 364 (418)
T ss_pred HHHHHHHHhCCC-EEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-CHHHHHHHHHHh-hcccccceeeecCCCCCc
Confidence 999999998864 454321 1234455553 111233344433 111 12232222110
Q ss_pred -----------------------CCCeEEEEecCCCHH-HHHHHHHHHHHHHHHH
Q 015890 354 -----------------------CRGHLRISFGGLVED-DCKAAADRLRRGLEEL 384 (398)
Q Consensus 354 -----------------------~~~~iRi~~~~~~~~-~~~~~~~~l~~~~~~~ 384 (398)
.++.||+|++- | +.+.+++.|.+++.++
T Consensus 365 l~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 365 LMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred eeeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence 13579999997 5 4778888898888765
No 193
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.95 E-value=1.1e-24 Score=208.53 Aligned_cols=358 Identities=16% Similarity=0.094 Sum_probs=238.0
Q ss_pred hHHHHHHHHHHcCCC--eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC---CCCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890 17 PIMVQIQELVRGAKN--AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG---ADEGLPELRDALVKKLNQENKLYKSS 91 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~--~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~~~~~~~~~l~~~l~~~~~~~~~~ 91 (398)
...+.+.+....... ..-++.|.+....+|.+.+++.+...-...+.|+ ...|..+++..+++++++++|++...
T Consensus 53 ~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~ 132 (481)
T PRK04366 53 EVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVT 132 (481)
T ss_pred HHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceE
Confidence 444555555544322 1224557677778899999888762112466773 45788999999999999999987444
Q ss_pred EEEecChHHHHHHH--HH-HhccCCC----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890 92 VMVTAGANQAFVNI--VL-TLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (398)
Q Consensus 92 v~~~~g~t~a~~~~--~~-~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~ 164 (398)
+..++|+++.+..+ ++ .+.++|| +|+++.++|+.+...++..|++++.+ +.+. ++.+|++.|++.+++++
T Consensus 133 l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v-~~~~-~~~~D~e~L~~~i~~~t- 209 (481)
T PRK04366 133 LQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEI-PSNE-DGLVDLEALKAAVGEDT- 209 (481)
T ss_pred EEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHhhcccCC-
Confidence 54445554444422 22 3345665 99999999999999999999999999 7764 35789999999998765
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC----ccee
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRV 239 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~ 239 (398)
++|++++|+ |||.+ .+++++|+++|+++|+++++|+++ ....+.. .....+.+++++|.+|+|+.| |..+
T Consensus 210 -~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~ 284 (481)
T PRK04366 210 -AALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGS 284 (481)
T ss_pred -eEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC-CccccCCCEEEEechhhcCCCCCCCCCCe
Confidence 899999988 99975 234999999999999999999999 4422321 222334568899999998643 4567
Q ss_pred EEEEccCCcHHHHHHHHHh-------------------hccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHH
Q 015890 240 GYIAYPSEVEGFATQLLKV-------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREII 299 (398)
Q Consensus 240 G~i~~~~~~~~~~~~l~~~-------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l 299 (398)
|++.++ +++.+.+... +....++.+.....++...+.. +.+.+++..++...+.+++
T Consensus 285 G~l~~~---~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l 361 (481)
T PRK04366 285 GPVGVK---EELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYL 361 (481)
T ss_pred eeeeeh---hhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877 4555443100 0001112222333333444433 4456677778888888999
Q ss_pred HHHhccCCCCccccCCccEEEEeeCC---CCCCChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEecC-CCHHHHHHHH
Q 015890 300 REALSPLGEGAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG-LVEDDCKAAA 374 (398)
Q Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~-~~~~~~~~~~ 374 (398)
.+.|+++..+. +......-+.++++ ....+..++.++|. ++||.+....... ..+.+|++++. .+.+|+++++
T Consensus 362 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~ 439 (481)
T PRK04366 362 KARLKDIYDLP-YDRPCMHEFVLSGKKLKETGVRTLDIAKRLL-DYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFI 439 (481)
T ss_pred HHHhHhhCccc-CCCCeeEEEEEECccccccCCCHHHHHHHHH-HCCccCCccccccccCCeEEEcccCCCCHHHHHHHH
Confidence 98888762212 22111122334432 11235678888875 8899875322212 35789999987 7899999999
Q ss_pred HHHHHHHHHHhcc
Q 015890 375 DRLRRGLEELVKD 387 (398)
Q Consensus 375 ~~l~~~~~~~~~~ 387 (398)
+.|.++.++..++
T Consensus 440 ~~l~~i~~~~~~~ 452 (481)
T PRK04366 440 AAMKQIAEEAKEN 452 (481)
T ss_pred HHHHHHHHHHHhC
Confidence 9999998877543
No 194
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=4e-25 Score=193.53 Aligned_cols=348 Identities=19% Similarity=0.245 Sum_probs=215.7
Q ss_pred HHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhc----------CCCCCCC-CCCCCcHHHHHHHHHHHhhhcCC
Q 015890 19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW----------DPSISKY-GADEGLPELRDALVKKLNQENKL 87 (398)
Q Consensus 19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~----------~~~~~~y-~~~~~~~~~~~~l~~~l~~~~~~ 87 (398)
+++.-+.+....=-+||+.|-|. ++-++--...+. ..+.-+| +...|.+++|+-+++.+ ++
T Consensus 13 l~~~y~~~ka~~L~LdmtRGKPs----~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~ll----gv 84 (425)
T PF12897_consen 13 LRKQYEELKAKGLKLDMTRGKPS----PEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELL----GV 84 (425)
T ss_dssp HHHHHHHHHHTT--EES---S------HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHH----TS
T ss_pred HHHHHHHHHHcCCCcccCCCCCC----HHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHh----CC
Confidence 44444444454557888877543 333331111111 1125578 78899999999999988 89
Q ss_pred CCCcEEEecChHHHH-HHHHH-Hhc----c---C-----CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 88 YKSSVMVTAGANQAF-VNIVL-TLC----D---A-----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~-~~~~~-~l~----~---~-----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
++++|++..+++--+ +.++. +++ + | .-+.|+|.|+|..+..+.+.+|++.+.+ |+.++| +|+|
T Consensus 85 ~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~V-pM~~dG--PDmD 161 (425)
T PF12897_consen 85 PPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPV-PMTEDG--PDMD 161 (425)
T ss_dssp -GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEE-EEETTE--E-HH
T ss_pred CHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEec-CCCCCC--CCHH
Confidence 999988886655433 33322 221 1 1 1268999999999999999999999999 998886 7999
Q ss_pred HHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEeece-e-cc-CCCccc-----------cc
Q 015890 154 WLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTY-F-MY-DGRKHC-----------CV 217 (398)
Q Consensus 154 ~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l-~~~~~~~livDe~~-~-~~-~~~~~~-----------~~ 217 (398)
.+++.+.+++.+|.+|.. --+||||.+++.|.+++++++ +...+..++.|.+| + .. +..+.. ..
T Consensus 162 ~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG 241 (425)
T PF12897_consen 162 MVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG 241 (425)
T ss_dssp HHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT
T ss_pred HHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC
Confidence 999999766678999887 448999999999999999998 44679999999999 2 22 121111 11
Q ss_pred cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc----hHHHHHHHHHH
Q 015890 218 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP----EWVTERVKDLV 293 (398)
Q Consensus 218 ~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~ 293 (398)
.+++++...|.||.. .||-+++++..+ ++-++.+.+.....+.+.....|..-..++.+.+ .++++.++.++
T Consensus 242 npdrv~~F~STSKIT-f~GaGva~~aaS---~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~ 317 (425)
T PF12897_consen 242 NPDRVYVFASTSKIT-FPGAGVAFFAAS---EANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILR 317 (425)
T ss_dssp -TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccccc-cCCcceeeeecC---HHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHh
Confidence 257889999999987 589999999999 7888888877777788999999999999998632 34555555555
Q ss_pred HHHHHHH----HHhc-cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec-CCCC--C---CCCeEEEEe
Q 015890 294 RNREIIR----EALS-PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGAC--G---CRGHLRISF 362 (398)
Q Consensus 294 ~~~~~l~----~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~--~---~~~~iRi~~ 362 (398)
-+.+... +.|. ..+..++..|.||+|++++..++ .+..+++ ++++.||.+.| |..| + .+.+|||+.
T Consensus 318 PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G--~AkrvV~-lakeAGV~LT~AGAtfPyg~DP~D~nIRiAP 394 (425)
T PF12897_consen 318 PKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG--TAKRVVE-LAKEAGVALTPAGATFPYGKDPRDSNIRIAP 394 (425)
T ss_dssp HHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT---HHHHHH-HHHHTTEE---TTTTSGGG--TTS-EEEE--
T ss_pred hhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC--hHHHHHH-HHHHhCceeCCCCCCCCCCCCCCCCcEEecC
Confidence 5554444 4454 44556788899999999998764 3666665 67899999998 4444 2 246899999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHH
Q 015890 363 GGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 363 ~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.++.+|++.+++.+.-+++-.
T Consensus 395 S~P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 395 SYPSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp SSS-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877543
No 195
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=9.6e-25 Score=205.82 Aligned_cols=330 Identities=16% Similarity=0.163 Sum_probs=208.5
Q ss_pred HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-CCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-ISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..+. ..+-.+|++.+++.+++.+.. ...... .....+..+.+++.+.+..+. ..++++++++++.
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~ 119 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---SVLTFTSCSAAHL 119 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---CEEEECChHHHHH
Confidence 4688899997643 222468999999999986521 111111 112234455555555555564 4454555668888
Q ss_pred HHHHHhc----cCC-CEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 104 NIVLTLC----DAG-DSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 104 ~~~~~l~----~~g-d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
.++..+. .+| ..|++.+..|++.. ......+.+++.+ +. .|++.+++.+++++ +++++++|+|
T Consensus 120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~-~~------~d~~~l~~~~~~~~--~~~vl~~p~~ 190 (402)
T PRK07505 120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETI-DH------NDLDALEDICKTNK--TVAYVADGVY 190 (402)
T ss_pred HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEe-CC------CCHHHHHHHHhcCC--CEEEEEeccc
Confidence 7876543 223 34767776665532 1122234566666 43 38899999987654 7888899999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-e-cc--CCCcc----ccc-cCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F-MY--DGRKH----CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~-~~--~~~~~----~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
|+|.+.+ +++|.++|+++|+++|+||+| + .+ .+... ... .++++++++|+||.++.+| ||++.++
T Consensus 191 ~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~ 264 (402)
T PRK07505 191 SMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD 264 (402)
T ss_pred ccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence 9999999 888899999999999999998 3 22 22211 111 3567889999999998665 8876543
Q ss_pred CcHHHHHHHHHhhccCCC--CcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890 247 EVEGFATQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323 (398)
Q Consensus 247 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 323 (398)
+++++.+.......++ +.+.++.+++.++++. .++++.+..+.++++...+...+... + ...+.++.++.
T Consensus 265 --~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~g~~~~i~~~~ 337 (402)
T PRK07505 265 --AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q-SGSFLPIRLIY 337 (402)
T ss_pred --HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C-CCCCCCEEEEE
Confidence 7788887765543333 3445677777777762 23334444444544444433322111 1 12212223333
Q ss_pred CCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
++.. ....++.++|+ ++||.++++..+.. .++|||+++. .+++++++++++|.+++.+
T Consensus 338 ~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 338 IGDE-DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eCCH-HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 3321 13456778776 88999998754322 3689999987 6899999999999988754
No 196
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=8e-25 Score=204.24 Aligned_cols=286 Identities=19% Similarity=0.180 Sum_probs=198.9
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+...++++.++++. |. +..++++++++++..++.+++++||+|+++.+.|.+....+ +..|+++..+
T Consensus 59 ~~pt~~~Le~~lA~l~----G~--~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~- 131 (386)
T PRK06767 59 GNPTVKLFEERMAVLE----GG--EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC- 131 (386)
T ss_pred CCcchHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEe-
Confidence 4555677888888876 43 34555666678999999999999999999999887654443 3446665554
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++++++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++| .++...+. ..+
T Consensus 132 ~~------~d~~~l~~~i~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~pl---~~g 197 (386)
T PRK06767 132 DM------ETEADIENKIRPNT--KLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQRPL---ELG 197 (386)
T ss_pred CC------CCHHHHHHhhCcCc--eEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hcC
Confidence 22 37889999998765 99999999999999999 899999999999999999999 44333221 223
Q ss_pred cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHH-HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLL-KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (398)
.++++.|++|.++.+|.++ |+++++ ++.++.+. ..........+++.++++...|+. +..+.++.++++..
T Consensus 198 ~Div~~S~sK~l~g~g~~~gG~v~~~---~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----l~~r~~~~~~~a~~ 270 (386)
T PRK06767 198 CDAVVHSATKYIGGHGDVVAGVTICK---TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAVRMDRHCDNAEK 270 (386)
T ss_pred CcEEEecCcceecCCCCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHH
Confidence 4588899999998778775 888888 56665543 333323344555555554444443 45677778899999
Q ss_pred HHHHhccCCCCc-cccCC----------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------------
Q 015890 299 IREALSPLGEGA-VKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------------- 353 (398)
Q Consensus 299 l~~~l~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------- 353 (398)
+.+.|++++.++ +..|. .+..+.+.+.....+...+++.| +..++.+.-|....
T Consensus 271 la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~ 349 (386)
T PRK06767 271 IVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAIP 349 (386)
T ss_pred HHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecCCCCcCccccCCCccccccCC
Confidence 999999987755 33221 23455566653222355666665 45666665553210
Q ss_pred ---------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 ---------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 ---------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.||+|++- |+.+.+++.|.+++..
T Consensus 350 ~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 350 AELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 13579999997 6777888888888764
No 197
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=1.7e-24 Score=196.64 Aligned_cols=326 Identities=20% Similarity=0.183 Sum_probs=239.5
Q ss_pred cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|++++||+.++ -.+..+|.+++++.+.+.+...+ -++...-..++++.+++|+ | .+..++.+++-.
T Consensus 37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g--~e~al~f~SGy~ 110 (388)
T COG0156 37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----G--AEAALLFSSGFV 110 (388)
T ss_pred CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh----C--CCcEEEEcccch
Confidence 368899999887 45568899999999988763211 2233344466677777766 4 345566666679
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--C--CCeEEEEeCCCCC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--P--TPKLVSVVNPGNP 176 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~--~~~~v~i~~p~np 176 (398)
|+..++.++++++|-|+...-.|.+....++..+.+.+.+ . +.|+++||+.++.. . +.++|+.....+.
T Consensus 111 AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f-~------HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 111 ANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRF-K------HNDLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred hHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEe-c------CCCHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 9999999999999999999999999999999999998887 2 24889999999751 1 2477777788899
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
.|.+.| |++|++++++|+.++++||+| . +..|.... ....+.+|+++|++|+||..| ||+.++
T Consensus 184 dGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~--- 254 (388)
T COG0156 184 DGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS--- 254 (388)
T ss_pred CCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc---
Confidence 999999 999999999999999999999 3 33343322 112345799999999999777 999999
Q ss_pred HHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890 249 EGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326 (398)
Q Consensus 249 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (398)
..+++.+...... ++.+.++...+++.++++. .......+++++++...+++.+...+. .+.+.. +.++.+.+..
T Consensus 255 ~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~-l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~-s~I~pv~~gd 331 (388)
T COG0156 255 AALIDYLRNRARPFIFSTALPPAVAAAALAALRI-LEEGPERRERLQELAAFFRSLLKALGL-VLLPSE-SPIIPVILGD 331 (388)
T ss_pred HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCeeeeEeCC
Confidence 7888888765332 2334456666667777775 233456677788888888877766565 333333 5556555543
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
. ....++...|++ .||++.+...+. +...+|++++. .++++++++++.|.+.
T Consensus 332 ~-~~a~~~s~~l~~-~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 332 E-ERALEASRALLE-EGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred H-HHHHHHHHHHHH-CCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2 236677777874 599998877654 34689999999 8999999999988764
No 198
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.95 E-value=1.5e-24 Score=202.28 Aligned_cols=279 Identities=20% Similarity=0.217 Sum_probs=192.3
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (398)
+...++++.+++++ |. +++++++|+++|+..++.+++++||+|+++.+.|.+... .++..|++++.+ +.
T Consensus 61 p~~~~le~~la~l~----g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~ 133 (390)
T PRK08133 61 PTVTMFQERLAALE----GA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFV-DL 133 (390)
T ss_pred hHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEE-CC
Confidence 34455666666655 53 468889999999999999999999999999999976443 456789999888 54
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| ......+ ...+.+
T Consensus 134 ~------d~~~l~~~i~~~t--klV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~p---l~~g~D 199 (390)
T PRK08133 134 T------DLDAWRAAVRPNT--KLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQP---LKLGAD 199 (390)
T ss_pred C------CHHHHHHhcCcCC--eEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhCCc
Confidence 2 7889999998765 99999999999999999 899999999999999999998 3322221 122345
Q ss_pred EEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 301 (398)
+++.|+||.++.+|.++ |+++.+ ++.++.+...........+...++.+...+ +.+..+.+++.+++..+.+
T Consensus 200 ivv~S~sK~~~g~g~~~GG~vv~~---~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl----~tl~~R~~~~~~~a~~la~ 272 (390)
T PRK08133 200 VVIHSATKYLDGQGRVLGGAVVGS---KELMEEVFGFLRTAGPTLSPFNAWVFLKGL----ETLSLRMEAHSANALALAE 272 (390)
T ss_pred EEEeecceeecCCcceEeEEEEcC---HHHHHHHHHHHHHhCCCCCHHHHHHHHccc----chHHHHHHHHHHHHHHHHH
Confidence 88999999998788887 566666 566666655444334445555444433333 3466677777788888999
Q ss_pred HhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------
Q 015890 302 ALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------- 353 (398)
Q Consensus 302 ~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------- 353 (398)
.|++.+.+. ++.|. .+..+.+++.. +.+.+.+++++-.+... +..++
T Consensus 273 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~----~~~~~~~f~~~l~l~~~-~~slG~~~sl~~~p~~ 347 (390)
T PRK08133 273 WLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG----GREAAWRVIDATRLISI-TANLGDTKTTITHPAT 347 (390)
T ss_pred HHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC----CHHHHHHHHHhCCcceE-eccCCCcceeeecCCC
Confidence 998776532 22111 13345556642 23334444444444321 11110
Q ss_pred ----------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 354 ----------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 354 ----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.++.||+|++- |+.+.+++.|.++++
T Consensus 348 ~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 389 (390)
T PRK08133 348 TTHGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA 389 (390)
T ss_pred CCcccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence 13589999997 667778888888775
No 199
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=2e-24 Score=204.97 Aligned_cols=346 Identities=12% Similarity=0.074 Sum_probs=223.4
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ..++ .+|++.+++.+++.+..... ......+....+++.|.+..+-..+.++++++|++|+.
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e 117 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP--SGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIE 117 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence 4688999998874 3343 58999999999987532111 11112344556666666554333467999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C--c-----------EEEEeccCCCCC---CC--------CChHHHH
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--V-----------THILVGPCSSKT---LH--------PDADWLE 156 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g--~-----------~~~~~~~~~~~~---~~--------~d~e~l~ 156 (398)
.+++... ....+|+....+|++........ + . .+..+ |.+... .. .+++.++
T Consensus 118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 196 (433)
T PRK08117 118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQA-PYPYCDRCPKGEDPEVCFLECLRDLE 196 (433)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEe-CCCccccccccCchhHHHHHHHHHHH
Confidence 9999743 22368999999999876543211 1 0 11122 211100 00 1456677
Q ss_pred Hhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890 157 KTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK 230 (398)
Q Consensus 157 ~~l~~---~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK 230 (398)
+.++. ...+++|+++..+...|.+ .++++++++.++|++||+++|+||+| ++..|........+....+.+++|
T Consensus 197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK 276 (433)
T PRK08117 197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAK 276 (433)
T ss_pred HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhh
Confidence 76642 2336888888777777875 57889999999999999999999999 666664332222222234569999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cC
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PL 306 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~ 306 (398)
.+| +|+++|+++++ +++.+.+.......+++.+++.++++.++|+.... +...++++++.+++++.|+ ++
T Consensus 277 ~lg-~G~pigav~~~---~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (433)
T PRK08117 277 GIA-SGLPLSAVVAS---KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEVLKEKH 350 (433)
T ss_pred hcc-CCCcceeEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998 89999999999 78887775444455677899999999999875211 1223333333444444333 34
Q ss_pred CCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.+.-.... +.++.+.+.... .....+...+ .++||.+.+... ..+.+|++++. .+++++++++++|.++
T Consensus 351 ~~~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~ 426 (433)
T PRK08117 351 PVIGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEA 426 (433)
T ss_pred CceeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 432223333 566666663211 1123455555 589999876321 25789999765 7999999999999999
Q ss_pred HHHHh
Q 015890 381 LEELV 385 (398)
Q Consensus 381 ~~~~~ 385 (398)
++++.
T Consensus 427 l~~~~ 431 (433)
T PRK08117 427 LTEYE 431 (433)
T ss_pred HHHHh
Confidence 98764
No 200
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=4.8e-25 Score=204.45 Aligned_cols=280 Identities=18% Similarity=0.228 Sum_probs=199.9
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 142 (398)
.+...++++.++++. |.+. .++++|+++++..++ .++++||+|+++.|.|++.. ..++..|+++..+ +
T Consensus 51 ~pt~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d 122 (366)
T PRK08247 51 NPTRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYV-N 122 (366)
T ss_pred CchHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEE-C
Confidence 344556666666665 5533 477788889999876 57789999999999998743 3455689998888 4
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
. .|++.+++.+++++ ++|++++|+||+|...+ +++|+++|+++|+++|+|++| .+....+ ...+.
T Consensus 123 ~------~d~~~l~~~i~~~t--klv~le~P~NP~~~~~d---l~~I~~la~~~g~~lIvD~t~~~~~~~~p---~~~g~ 188 (366)
T PRK08247 123 T------ASLKAIEQAITPNT--KAIFIETPTNPLMQETD---IAAIAKIAKKHGLLLIVDNTFYTPVLQRP---LEEGA 188 (366)
T ss_pred C------CCHHHHHHhcccCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccCc---hhcCC
Confidence 3 27899999998765 99999999999876555 999999999999999999999 4332222 12345
Q ss_pred EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
++++.|+||.++. ++.+.|+++.++ +++.+.+...+.....+.+++.++++...++. +..+.++.+++++.+.
T Consensus 189 di~i~S~sK~~~g~~d~~~G~iv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----l~~r~~~~~~~a~~l~ 262 (366)
T PRK08247 189 DIVIHSATKYLGGHNDVLAGLVVAKG--QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMRQHEENAKAIA 262 (366)
T ss_pred cEEEeecceeccCCCceeeeEEecCh--HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence 6899999999963 346889999874 56777777666555566777777776666653 4556667788999999
Q ss_pred HHhccCCCCc-cccC-CccEEEEeeCCCCCCChHHHHHHHHH-------------hcCeEEecCCCCC------------
Q 015890 301 EALSPLGEGA-VKGG-EGAIYLWARLPEKHLDDFEVVRWLAH-------------RHGVVVIPGGACG------------ 353 (398)
Q Consensus 301 ~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~~gi~v~~g~~~~------------ 353 (398)
+.|++++.+. +..| .+++|.+ .+.. .+...++++ ...+.+.|++.++
T Consensus 263 ~~L~~~p~v~~v~~P~~gg~~sf-~~~~-----~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~g 336 (366)
T PRK08247 263 AFLNEQPGVTDVLYPGRGGMLSF-RLQD-----EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANG 336 (366)
T ss_pred HHHHhCCCeeEEecCCcCcEEEE-EECC-----HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcC
Confidence 9999887644 4444 6676666 5642 222222222 2345555654321
Q ss_pred -CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 -CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 -~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.+|+|++- |+.+.+++.|.+++.+
T Consensus 337 i~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 337 VCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 13579999996 6778888888888875
No 201
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=2.9e-24 Score=199.73 Aligned_cols=282 Identities=22% Similarity=0.247 Sum_probs=201.2
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 141 (398)
..+...++++.++++. |. +..++++++++|+..++.+++++||+|+++.+.|.+... .++..|+++..+
T Consensus 38 ~~p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v- 110 (369)
T cd00614 38 GNPTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV- 110 (369)
T ss_pred CChhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe-
Confidence 4455666777777765 42 467778888999999999999999999999999987654 345678888877
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .+.... ....+
T Consensus 111 ~~~------d~~~l~~~i~~~~--~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~---~~~~g 176 (369)
T cd00614 111 DPD------DPEALEAAIKPET--KLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR---PLELG 176 (369)
T ss_pred CCC------CHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC---hhhhC
Confidence 432 5889999998754 99999999999999999 899999999999999999999 433211 11234
Q ss_pred cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++.+| .+.|++++++ +++++.+.......+.+.++...+++...++. +..+.++..+++..+
T Consensus 177 ~Divv~S~tK~l~g~~~~~gG~v~~~~--~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----l~~r~~~~~~na~~l 250 (369)
T cd00614 177 ADIVVHSATKYIGGHSDVIAGVVVGSG--EALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRMERHSENALKV 250 (369)
T ss_pred CcEEEeccceeccCCCCceEEEEEeCc--HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Confidence 5688999999997555 7899999983 37888887766555666777776666555543 455677788889999
Q ss_pred HHHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-------------cC
Q 015890 300 REALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-------------PG 349 (398)
Q Consensus 300 ~~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-------------~g 349 (398)
.+.|++++.+ ++..| ..+..+.+.+.. + .+...+++++-.+... |.
T Consensus 251 a~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~-~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~ 326 (369)
T cd00614 251 AEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---G-LEAAKKFLNALKLFSLAVSLGGVESLVEHPA 326 (369)
T ss_pred HHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC---C-HHHHHHHHHcCCcceEcccCCCCceeeeCCc
Confidence 9999887753 22222 125566667752 1 2333344445555421 11
Q ss_pred C--CC----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 350 G--AC----------G-CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 350 ~--~~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
. .+ + .++.||+|++- |+.+.+++.|.+++
T Consensus 327 ~~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al 368 (369)
T cd00614 327 SMTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL 368 (369)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 1 00 0 13579999997 67777888887775
No 202
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=1.6e-25 Score=207.95 Aligned_cols=307 Identities=17% Similarity=0.158 Sum_probs=210.3
Q ss_pred CCcHHHHHHHHHhhcCCCC--CCCCCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc----CC-
Q 015890 43 QPPKMAMEKVKELVWDPSI--SKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AG- 113 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~--~~y~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~----~g- 113 (398)
++|+.+++++.+.+..... .......+ ..+..+.+.+.+.++++.++++|++++|+|++++.++.++.. +|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 88 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK 88 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence 4689999999887743211 11001101 113334455555555588888999999999999999988753 55
Q ss_pred CEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 114 DSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 114 d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
+.|++....|+.+.. .++..|++++.+ +.+++ +.+|++++++.+++++ ++|++++++||||.+.| +++|.
T Consensus 89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~---~~~I~ 161 (353)
T TIGR03235 89 KHIITSAIEHPAVLEPIRALERNGFTVTYL-PVDES-GRIDVDELADAIRPDT--LLVSIMHVNNETGSIQP---IREIA 161 (353)
T ss_pred CeeeEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhCCCCC--EEEEEEcccCCceeccC---HHHHH
Confidence 778888777766443 345679999998 77654 4689999999998654 99999999999999999 89999
Q ss_pred HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH--HHHh-------hc
Q 015890 191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--LLKV-------QD 260 (398)
Q Consensus 191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~--l~~~-------~~ 260 (398)
++|+++|+++|+|+++ ++..... ....+.++++.|.+|++|++| +|+++.++ +.... +... ..
T Consensus 162 ~l~~~~~~~~ivD~a~~~g~~~~~--~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~---~~~~~~~~~~~~~~~~~~~~ 234 (353)
T TIGR03235 162 EVLEAHEAFFHVDAAQVVGKITVD--LSADRIDLISCSGHKIYGPKG--IGALVIRK---RGKPKAPLKPIMFGGGQERG 234 (353)
T ss_pred HHHHHcCCEEEEEchhhcCCcccc--ccccCCCEEEeehhhcCCCCc--eEEEEEcc---CcccccccCceeeCCCCcCc
Confidence 9999999999999998 5543222 222345588889999887556 78888884 32211 1111 01
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRW 337 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 337 (398)
....+.+.+...++.++++......++..++++++++.+++.|+..+. ++..++. ..++.+.++. .+..++...
T Consensus 235 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~~--~~~~~v~~~ 311 (353)
T TIGR03235 235 LRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSIDG--VNSEALIVN 311 (353)
T ss_pred cccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeCC--cCHHHHHHH
Confidence 124566777777777777753345677788899999999999987544 5553321 2234444442 356677776
Q ss_pred HHHhcCeEEecCCCCCCC----CeEEEEecCCCHHH
Q 015890 338 LAHRHGVVVIPGGACGCR----GHLRISFGGLVEDD 369 (398)
Q Consensus 338 ll~~~gi~v~~g~~~~~~----~~iRi~~~~~~~~~ 369 (398)
| ++ +|.+.+|..|... .++|.+++. +++.
T Consensus 312 L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~ 344 (353)
T TIGR03235 312 L-RA-DAAVSTGSACSSSKYEPSHVLQAMGL-DTDR 344 (353)
T ss_pred H-hC-CeEEEchhhcCCCCCCCCHHHHHcCC-CHHH
Confidence 6 44 9999999988533 368888886 4443
No 203
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-24 Score=198.42 Aligned_cols=346 Identities=14% Similarity=0.120 Sum_probs=239.9
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|.+ .++ .+|.|.+|+.+++.... .+.......+....+++.|...... ..+.+++++++++|+
T Consensus 53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~ 130 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--HTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAV 130 (447)
T ss_pred CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--cccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHH
Confidence 46899999999653 333 69999999999987632 1212222225556666666665554 356799999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHH-hc----------C---cEEEEeccCCC-C--CC--------CCChHHH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MT----------G---VTHILVGPCSS-K--TL--------HPDADWL 155 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~----------g---~~~~~~~~~~~-~--~~--------~~d~e~l 155 (398)
+.+++... .....|+....+|++....+- .. + ..+..+ |.+. . .+ ....+.+
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~-Pyp~~yr~p~~~~~~~~~~~~~~~~ 209 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHV-PYPNPYRCPFGIGGEECGDDALEYI 209 (447)
T ss_pred HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEe-cCCccccCcccCchhhhhHHHHHHH
Confidence 99999864 334689999999988553221 11 1 123333 3221 1 11 1124456
Q ss_pred HHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccc
Q 015890 156 EKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSF 228 (398)
Q Consensus 156 ~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~ 228 (398)
+..+. ....++++++...+...|.+ .|++.++++.++|++||+++|+||++ ++..|..+.....+....+-++
T Consensus 210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~ 289 (447)
T COG0160 210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL 289 (447)
T ss_pred HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEe
Confidence 66443 22337899999889999985 67778999999999999999999999 8888855544433333445588
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccC
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+|.+| .|+++|.++.+ +++.+ ........++..|+.+.+++.+.|+..+ +.+++..+.-...+++|.+.-++.
T Consensus 290 aK~ig-~G~Pl~avv~r---~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~ 364 (447)
T COG0160 290 AKSLG-GGLPLSAVVGR---AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKH 364 (447)
T ss_pred ccccc-CCCceeEEecc---HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99998 69999999999 78877 5445555678999999999999998522 334444444455566776666677
Q ss_pred CCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
+.+--+... |+++.+++.+.. .....++.++. ++|+.+..+.. ..+.|||...- .+++++++++++|.
T Consensus 365 ~~IgdVRG~-Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~il~ 440 (447)
T COG0160 365 PLIGDVRGL-GLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDILE 440 (447)
T ss_pred Cceeccccc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHHHH
Confidence 755555566 778877775321 12345666664 89998876532 25789999877 79999999999999
Q ss_pred HHHHHH
Q 015890 379 RGLEEL 384 (398)
Q Consensus 379 ~~~~~~ 384 (398)
+++++.
T Consensus 441 ~al~~~ 446 (447)
T COG0160 441 EALKEA 446 (447)
T ss_pred HHHHhh
Confidence 999874
No 204
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=203.93 Aligned_cols=345 Identities=15% Similarity=0.088 Sum_probs=220.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+. ..+.......+.+..+++.+.+..+.. .+.+++++++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~--~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~ 130 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF--THTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAV 130 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 3588899998764 3333 5899999999998763 222222223456667777776655422 25788999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcC-c-------------EEEEeccCC-CCC----CCC--------ChH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-V-------------THILVGPCS-SKT----LHP--------DAD 153 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-~-------------~~~~~~~~~-~~~----~~~--------d~e 153 (398)
+.+++... ...++|+...++|+++...+-... . .+..+ +.. ... ... ..+
T Consensus 131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK06058 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA-PMSYPYRDPKGLATDGEEAAARAIT 209 (443)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc-CCCcccccccccccchHHHHHHHHH
Confidence 99999543 233789999999999875443221 0 11111 110 000 000 122
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890 154 WLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK 230 (398)
Q Consensus 154 ~l~~~l~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK 230 (398)
.+++.+..+ .+++|+++..+...|.+ .+++.+++|.++|++||+++|.||++ |+..|........+....+.+++|
T Consensus 210 ~l~~~~~~~-~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK 288 (443)
T PRK06058 210 VIEKQVGAD-NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAK 288 (443)
T ss_pred HHHHhhCCC-ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcc
Confidence 233433323 36888887556556765 56889999999999999999999999 665554332221111112336689
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
.++ +|+++|+++++ +++.+.+.......+++.|+.+++++.+.|+... +..++..+.-...++.|.+..++.+.
T Consensus 289 ~l~-~G~Pi~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 364 (443)
T PRK06058 289 GIA-GGLPLSAVTGR---AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDR 364 (443)
T ss_pred ccc-CCCccEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 998 89999999999 7888777655556688899999999999997521 22233333333334444444344454
Q ss_pred CccccCCccEEEEeeCCCC--CCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEK--HLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+.-+.+. |.++.+.+... ... ...+...++ ++||.+.++..+ .+.||+.+.. .+++++++++++|.+++
T Consensus 365 i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l~~~l 440 (443)
T PRK06058 365 IGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVLEAAL 440 (443)
T ss_pred EEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 3335566 55555555321 011 233445444 799999886543 3689998666 79999999999999998
Q ss_pred HH
Q 015890 382 EE 383 (398)
Q Consensus 382 ~~ 383 (398)
++
T Consensus 441 ~~ 442 (443)
T PRK06058 441 AD 442 (443)
T ss_pred Hh
Confidence 65
No 205
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=1.5e-24 Score=201.47 Aligned_cols=284 Identities=23% Similarity=0.197 Sum_probs=198.5
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+...++++.++++. + .+++++++|+++|+..++.+++++||+|+++.|+|.+....+ ...|.++..+
T Consensus 49 ~~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~- 121 (382)
T TIGR02080 49 GNPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV- 121 (382)
T ss_pred CCchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE-
Confidence 4555677777777765 4 467999999999999999999999999999999998655433 3334555554
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++++++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++| .+....+. ..+
T Consensus 122 d~------~d~~~l~~ai~~~t--klV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~pl---~~g 187 (382)
T TIGR02080 122 DQ------GDEQALRAALAQKP--KLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQNPL---ALG 187 (382)
T ss_pred CC------CCHHHHHHhcCcCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhC
Confidence 21 27899999998765 99999999999999999 889999999999999999999 33211111 112
Q ss_pred cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.+++++|++|.++ .++++.|+++.++ +++++++.......+.+.++...+.+...++ .+..+.++..+++..+
T Consensus 188 aDivv~S~sK~l~G~~~~~~G~i~~~~--~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----tl~~R~~~~~~na~~~ 261 (382)
T TIGR02080 188 ADLVLHSCTKYLNGHSDVIAGAVIAKD--PQVAEELAWWANNLGVTGGAFDSYLTLRGLR----TLVARMRLQQRNAQAI 261 (382)
T ss_pred CCEEEeecceeccCCCCceeEEEEeCC--HHHHHHHHHHHHccCCCCCHHHHHHHHcccc----hHHHHHHHHHHHHHHH
Confidence 3488999999985 4678899988765 7788888777766667777777666544444 3556677788888899
Q ss_pred HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCe---EEecCCCC-------
Q 015890 300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC------- 352 (398)
Q Consensus 300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~~g~~~------- 352 (398)
.+.|+.++.+. |..|. .+..+.+++... .+...++++.-.+ .+.-|...
T Consensus 262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 337 (382)
T TIGR02080 262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG----EQTVRRFLGGLSLFTLAESLGGVESLIAHPA 337 (382)
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc----HHHHHHHHHcCCcceEeccCCCCcceeECCC
Confidence 99998877532 22211 133556666421 2223333333333 22212110
Q ss_pred ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .++.||+|++- |+.+.+++.|.+++.+
T Consensus 338 ~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 338 TMTHAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLRA 381 (382)
T ss_pred ccCcccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 13589999997 6677788888888753
No 206
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.3e-24 Score=200.22 Aligned_cols=287 Identities=23% Similarity=0.204 Sum_probs=204.6
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+....+++.++++. +. +++++++|+++++..++.+++++||+|+++.|+|++....+ ...|.++..+
T Consensus 50 ~~pt~~~L~~~lA~l~----g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v- 122 (386)
T PRK08045 50 GNPTRDVVQRALAELE----GG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV- 122 (386)
T ss_pred CCccHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe-
Confidence 4555667777777765 42 46999999999999999999999999999999998644333 2234466555
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+ ..|++.+++.+++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++| .+....+. ..+
T Consensus 123 d------~~d~e~l~~~l~~~t--klV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~pl---~~g 188 (386)
T PRK08045 123 D------QGDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQNPL---ALG 188 (386)
T ss_pred C------CCCHHHHHHhcccCC--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCCch---hhC
Confidence 2 248899999998765 99999999999999999 889999999999999999999 33222221 223
Q ss_pred cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++ .++...|+++.++ +++++.+.......+.+.+++.++.+...|+. +..+.+++.+++..+
T Consensus 189 aDivv~S~tK~l~G~~d~~~G~vi~~~--~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----l~~R~~~~~~na~~l 262 (386)
T PRK08045 189 ADLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAI 262 (386)
T ss_pred CCEEEeecceeccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----HHHHHHHHHHHHHHH
Confidence 3488999999995 4567789988754 67888777666666777888888888888875 677888889999999
Q ss_pred HHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890 300 REALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC------- 352 (398)
Q Consensus 300 ~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~------- 352 (398)
.+.|++++.+ +|+.|. .+-.+.+.+.. +.+.+.+++++-.+.. .-|...
T Consensus 263 a~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~ 338 (386)
T PRK08045 263 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG----DEQTLRRFLGGLSLFTLAESLGGVESLISHAA 338 (386)
T ss_pred HHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC----cHHHHHHHHHhccceeEeccCCCCceeEeCCC
Confidence 9999988753 222210 12345556642 1222233433333321 111110
Q ss_pred ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+ .++.||+|++- |+.+.+++.|.+++++..+
T Consensus 339 ~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 339 TMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK 385 (386)
T ss_pred CcccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhhc
Confidence 0 13689999997 6778888999988887654
No 207
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.7e-24 Score=187.65 Aligned_cols=321 Identities=16% Similarity=0.148 Sum_probs=217.6
Q ss_pred cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
++..+++|+++++|.+.-.. ....|+.++....+.+.+++. ++. ..++|++++|+++..++.+.+++|+.|++
T Consensus 7 Dn~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~----~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~ 79 (342)
T COG2008 7 DNVAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAEL----FGK--EAALFVPSGTQANQLALAAHCQPGESVIC 79 (342)
T ss_pred CccCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHH----hCC--ceEEEecCccHHHHHHHHHhcCCCCeEEE
Confidence 35557899999999886532 244566555555555555444 454 78999999999999999999999999999
Q ss_pred eCCCCcChhh--HHHhcC-cEEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 119 FAPYYFNSYM--SFQMTG-VTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 119 ~~p~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
..-+|-...+ ....++ ...+.+ .+..+..+++|+++..++ ++....++++.+..|..|+++|.++|++|.+
T Consensus 80 ~~~aHi~~~E~Ga~~~~~~~~~~~~--~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~ 157 (342)
T COG2008 80 HETAHIYTDECGAPEFFGGGQKLPI--VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISA 157 (342)
T ss_pred eccccceecccCcHHHHcCCceecc--CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHH
Confidence 9888844332 223333 333333 232345789999999887 2333455555556668899999999999999
Q ss_pred HHHHcCCEEEEeece----eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc-
Q 015890 192 LCKAAGSWLVVDNTY----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA- 266 (398)
Q Consensus 192 l~~~~~~~livDe~~----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~- 266 (398)
+|+++|+.|++|.+. ....+.........-+.+..++||..+.|+ |.++..+ .++++....++.......
T Consensus 158 ~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn--~~~~~~a~~~rK~~Ggl~~ 232 (342)
T COG2008 158 VCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGN--RDFAKRARRWRKRAGGLMR 232 (342)
T ss_pred HHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcC--HHHHHHHHHHHHHhcccHh
Confidence 999999999999999 233343222223334466778899886554 7766665 888888876665444443
Q ss_pred -chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890 267 -SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345 (398)
Q Consensus 267 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 345 (398)
.-+..++...+|++ +.......+-...+.+|.+.|...++.++..|..+|.+++.+++...+......++ ...|++
T Consensus 233 k~r~laA~~~~~l~~--~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~-~~~~~~ 309 (342)
T COG2008 233 KARFLAAQGLYALED--DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGAL-FYRGVL 309 (342)
T ss_pred hhhHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchh-heeeee
Confidence 34444445556653 32344455556668899999997766677776669999999986432222223322 245555
Q ss_pred EecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 346 VIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 346 v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+.+++ ..+|+..++ .+++++++++..+++++
T Consensus 310 ~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 310 IGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 54421 479999999 89999999988887654
No 208
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.94 E-value=1.9e-24 Score=203.78 Aligned_cols=330 Identities=12% Similarity=0.127 Sum_probs=222.0
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|..... .+|++.+++.+++..... .... ...+....+++.+.+.++ .+.++++++|++|+.
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e 108 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL--SSRA-FYNDVFGEFAEYVTKLFG--YDKVLPMNTGAEAVE 108 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc--cccc-cCCHHHHHHHHHHHhhcC--CCEEEEeCccHHHHH
Confidence 46888999988754433 489999999998765321 1111 123344455555555445 358999999999999
Q ss_pred HHHHHhcc---------C-CCEEEEeCCCCcChh-hHHHhcCc------------EEEEeccCCCCCCCCChHHHHHhhc
Q 015890 104 NIVLTLCD---------A-GDSVVMFAPYYFNSY-MSFQMTGV------------THILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 104 ~~~~~l~~---------~-gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
.+++.+.. + .+.|+....+|++.. ..+...+- .+..+ + ..|++++++.++
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI-P------YNNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe-C------CCCHHHHHHHHH
Confidence 99998631 2 367888888988743 32332221 11112 1 127889999886
Q ss_pred c-CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCC
Q 015890 161 T-KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 161 ~-~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~ 234 (398)
. ....++|+++.+++++|...+ .+.+++|.++|++||+++|+||+| +++.|...... ....+++ +++|.++.
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~ 259 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSG 259 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccC
Confidence 2 233678888888999999875 557999999999999999999999 65555432211 1112233 46799985
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Cccc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVK 312 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~ 312 (398)
+++++|+++.+ +++++.+.......+++.+++.++++.++|+...+ ....++.+++.+++.+.|++++. +...
T Consensus 260 g~~~ig~v~~~---~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~ 334 (401)
T TIGR01885 260 GVYPVSAVLAD---DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKKLPKPIITEV 334 (401)
T ss_pred CCCCcEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhccCCceeEE
Confidence 56899999998 78887775533344667788888888888875221 12334566667888888877643 1222
Q ss_pred cCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
.+. +.+..+.++... .+..+++.+|. ++||.+.|. .++.+||+++. .+++++++++++|.+++
T Consensus 335 ~g~-g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 335 RGR-GLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT----HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred eec-CeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec----CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 344 445444454321 14567888775 889999875 36789999876 79999999999998875
No 209
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=6.4e-24 Score=200.92 Aligned_cols=344 Identities=13% Similarity=0.064 Sum_probs=222.8
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.....+ .....+.+..+++.+.+..+...+.++++++|++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e 116 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF--AGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVE 116 (423)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4689999998774 3343 589999999999876321111 0112344556677666554433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCC-CCCChHHHHHhhcc
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKT-LHPDADWLEKTLET 161 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~-~~~d~e~l~~~l~~ 161 (398)
.+++.... +| .+|+....+|++....+....- .+..+ +.+.+. ...+++.+++.+..
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~l~~~l~~ 195 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTA-PFPPDGYEQATLDALEALLEK 195 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEe-CCCcchhHHHHHHHHHHHHHh
Confidence 99997641 23 5899999999987654433221 11122 221110 01127888888862
Q ss_pred -CCCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 162 -KPTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 162 -~~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
...+++|+++. .++..|... +++++++|.++|++||+++|+||++ ++..|........+....+.+++|.++.++
T Consensus 196 ~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~ 275 (423)
T PRK05964 196 HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGY 275 (423)
T ss_pred CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCc
Confidence 23367888875 477788754 8999999999999999999999999 655553322121222233447889997333
Q ss_pred ceeEEEEccCCcHHHHHHHHHh------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+++|+++.+ +++.+.+... ....+++.++.+.+++.+.++. .+++.++..+.....++.+.+. .+.+.
T Consensus 276 ~p~~av~~~---~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l-~~~~~ 351 (423)
T PRK05964 276 LPLAATLCT---AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPF-RDLPG 351 (423)
T ss_pred ccceEEEEc---HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh-ccCCC
Confidence 899999988 7888777431 1234556788888888888874 2234444444444444444432 23333
Q ss_pred CccccCCccEEEEeeCCCCCC--ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKHL--DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.-.... +.++.+.+..... ....+...+. ++||.+.+. .+.+|++++. .+++|+++++++|.++++++
T Consensus 352 i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-----~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 352 VADVRVL-GAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-----GNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred eEEeecc-cEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 2223344 5666666653210 1445666664 899999873 2579999886 79999999999999998763
No 210
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.9e-24 Score=201.64 Aligned_cols=285 Identities=18% Similarity=0.167 Sum_probs=200.4
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~ 141 (398)
..+...++++.++++. |. +..++++++++|+..++.+++++||+|+++.|+|.+... .++..|+++..+
T Consensus 62 ~~p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v- 134 (398)
T PRK08249 62 TNPTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC- 134 (398)
T ss_pred CChHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc-
Confidence 4455577777777776 43 456777777899999999999999999999999987543 355678888776
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++.+++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++| ..+...+. ..+
T Consensus 135 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~l---~~~ 200 (398)
T PRK08249 135 ET------GDHEQIEAEIAKGC--DLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQNPL---ALG 200 (398)
T ss_pred CC------CCHHHHHHhcCCCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCCch---hhC
Confidence 32 48999999998765 99999999999999999 889999999999999999999 33322221 123
Q ss_pred cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++.+|-++ |+++.+ +++++.+.........+.++..++.+...++. +..+.++..+++..+
T Consensus 201 ~Divv~S~sK~l~g~~~~~gG~vv~~---~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~~l 273 (398)
T PRK08249 201 ADLVIHSATKFLSGHADALGGVVCGS---KELMEQVYHYREINGATMDPMSAYLILRGMKT----LKLRVRQQQESAMAL 273 (398)
T ss_pred CCEEeccCceecCCCCCceEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHHHH
Confidence 3478899999998666555 666666 78888887776655666677776666555543 566667778888899
Q ss_pred HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890 300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC------- 352 (398)
Q Consensus 300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~------- 352 (398)
.+.|++++.+. |..|. .+-.+.+.+.. +.+...+++++-.+.. .-|...
T Consensus 274 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~ 349 (398)
T PRK08249 274 AKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG----GMDTVKRLLPKLRYAHRAANLGAVETIYGPAR 349 (398)
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC----CHHHHHHHHHhCCcceEccCCCCCCceeeCCc
Confidence 99998876532 22211 13345556542 1233334444444432 111100
Q ss_pred ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+ .++.||+|++- |+.+.+++.|.+++..+.
T Consensus 350 ~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 350 TTSHVENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHhh
Confidence 0 13579999997 677788888888887654
No 211
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3.3e-24 Score=198.52 Aligned_cols=287 Identities=19% Similarity=0.172 Sum_probs=205.3
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 141 (398)
+.+....+++.++++. + .+++++++|+++++..++.+++++||+|+++.|+|.+.... .+..|++++.+
T Consensus 51 ~npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v- 123 (388)
T PRK08861 51 GNPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV- 123 (388)
T ss_pred CCchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE-
Confidence 4455677777777776 4 47899999999999999999999999999999999864432 33456787777
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++++++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++| .+....+. ..+
T Consensus 124 d~------~d~e~l~~~i~~~t--klV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~pl---~~G 189 (388)
T PRK08861 124 DQ------SDAAALDAALAKKP--KLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQKPL---ELG 189 (388)
T ss_pred CC------CCHHHHHHhcCcCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCCCc---ccC
Confidence 32 38899999998765 99999999999999999 888999999999999999999 33222221 223
Q ss_pred cEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++. .+...|+++.++ +++.+.+...+...+...+++..+.+...|+. +.-+.+++.+++..+
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~--~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----l~lR~~~~~~~a~~~ 263 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKT--KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMRVHEESAQQI 263 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecH--HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----HHHHHHHHHHHHHHH
Confidence 45889999999963 346789988764 56777777666666667778877766666665 667777888888899
Q ss_pred HHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890 300 REALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC------- 352 (398)
Q Consensus 300 ~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~------- 352 (398)
.+.|+++|.+ +|..|. .+-.+.+.+.. +.+...++++.-.+.. .-|..-
T Consensus 264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~ 339 (388)
T PRK08861 264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG----SFEQLKVFVKALALFSLAESLGGVESLICHPA 339 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC----CHHHHHHHHhcCCcceEccCCCCCcceeeCCC
Confidence 9999887753 222221 13345566642 1233334443333322 111100
Q ss_pred ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+ .++.||+|++- |+.+.+++.|.++++++.+
T Consensus 340 ~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 340 SMTHRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred cccccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHh
Confidence 0 13579999997 6778888999999887765
No 212
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=6.9e-24 Score=196.93 Aligned_cols=283 Identities=20% Similarity=0.163 Sum_probs=191.6
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCc----ChhhHHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF----NSYMSFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~----~~~~~~~~~g~~~~~~~~ 142 (398)
.+...++++.++++. +.+ ..+++ +++++++..++.+++++||+|+++.+.|. .+...++..|+++..+ +
T Consensus 44 ~p~~~~L~~~lA~l~----g~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~-~ 116 (376)
T PRK06460 44 NPTVLELTKKIVELE----NAE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS-N 116 (376)
T ss_pred CccHHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE-C
Confidence 466677888888876 443 34554 55569999999999999999999987664 3446678889998877 5
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
.+ +.+.+++.++++ +++|++++|+||||.+++ +++|+++|+++|+++|+|++| ......+ ...+.
T Consensus 117 ~~------~~~~l~~~~~~~--tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~~~~---l~~~~ 182 (376)
T PRK06460 117 PG------SDNIIEKAKSKR--YDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPINQKP---LELGA 182 (376)
T ss_pred CC------CHHHHHHhcCCC--ceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccccCCh---hhcCC
Confidence 43 223455555554 499999999999999999 778899999999999999999 3332211 12345
Q ss_pred EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
++++.|+||.++. .+.++||++.+ +++++.+......++.+.++.. +..+++ +.++++.+.+++.++++++.
T Consensus 183 divv~S~sK~l~G~~~~~~G~~~~~---~~l~~~l~~~~~~~g~~~~~~~---a~~~l~-~~~~l~~r~~~~~~n~~~l~ 255 (376)
T PRK06460 183 DIVVHSASKFLAGHNDVIAGLAAGY---GKLLNVIDQMRRTLGTSLDPHA---AYLTLR-GIKTLKIRMDVINRNAEQIA 255 (376)
T ss_pred CEEEeecceeccCCCCceEEEEecC---HHHHHHHHHHHHhcCCCCCHHH---HHHHHh-chhhHHHHHHHHHHHHHHHH
Confidence 6899999999952 23679999988 7888888877665555544432 223333 35677888889999999999
Q ss_pred HHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---C----------C
Q 015890 301 EALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G----------G 350 (398)
Q Consensus 301 ~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g----------~ 350 (398)
+.|++.+.+ +++.| ..|-.+.+.+... .+...++++.-.+.... | +
T Consensus 256 ~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~----~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~ 331 (376)
T PRK06460 256 EFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG----QESALKVMKSLKLIIPAQTLGGVNSVISHPAT 331 (376)
T ss_pred HHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc----HHHHHHHHHhCCcceeccCCCCCceEEeCccc
Confidence 999987653 22222 1133455566421 22233344333321111 1 0
Q ss_pred C----C--------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 351 A----C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 351 ~----~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
. + + .++.||+|++- |+.+.+++.|.+++..+
T Consensus 332 ~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 332 MSHRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL 375 (376)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 0 0 13579999997 67778888888888653
No 213
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=4.7e-24 Score=199.40 Aligned_cols=284 Identities=21% Similarity=0.221 Sum_probs=194.9
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 141 (398)
+.+...++++.++++. |.+. .+++++++.++..++.+++++||+|+++.+.|.++... ++..|++++.+
T Consensus 63 ~~p~~~~Le~~lA~l~----G~~~--~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v- 135 (398)
T PRK07504 63 SNPTVDMFEKRMCALE----GAED--ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV- 135 (398)
T ss_pred CCchHHHHHHHHHHHh----CCCe--eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE-
Confidence 4455677888888776 5543 34577888999888888899999999999999875443 35678888887
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+ .+|++.+++++++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| .+....+ ...+
T Consensus 136 d------~~d~e~l~~ai~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~~---~~~g 201 (398)
T PRK07504 136 D------GLDLDNWEKAVRPNT--KVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQKP---LELG 201 (398)
T ss_pred C------CCCHHHHHHhcCcCc--eEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCCc---hhhC
Confidence 3 258999999998765 99999999999999999 899999999999999999999 3332211 1224
Q ss_pred cEEEEcccccccCCCcceeE-EEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (398)
.++++.|++|.++.+|.++| +++.+ ++.+. .+.........++++...+.+...|+. +..+.++..++...
T Consensus 202 aDivv~S~sK~l~g~g~~~GG~vv~~---~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~ 274 (398)
T PRK07504 202 AHIVVYSATKHIDGQGRCLGGVVLSD---KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAA 274 (398)
T ss_pred CCEEEeeccccccCCccceEEEEEeC---cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHH
Confidence 56889999999988898886 55565 44443 344333333455666666666666554 56667777788888
Q ss_pred HHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe---cCCCC------
Q 015890 299 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC------ 352 (398)
Q Consensus 299 l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~---~g~~~------ 352 (398)
+.+.|+.++.+. |..| ..+..+.+++... .+...+++++-.+.-. -|...
T Consensus 275 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~~~~~l~~~~~~~slG~~~sl~~~p 350 (398)
T PRK07504 275 IADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG----KEAAFRFLNALKIVRISNNLGDAKSLITHP 350 (398)
T ss_pred HHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC----HHHHHHHHHhCCcceecccCCCCCeeeeCC
Confidence 888888776532 2211 1144566677421 2333334433343322 11110
Q ss_pred ----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 353 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 353 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+ .++.||+|++- |+.+.+++.|.+++.+.
T Consensus 351 ~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 351 ATTTHKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKKV 396 (398)
T ss_pred CCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 13579999997 66777888888888754
No 214
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=5.8e-24 Score=198.62 Aligned_cols=281 Identities=22% Similarity=0.177 Sum_probs=191.1
Q ss_pred HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCC
Q 015890 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLH 149 (398)
Q Consensus 74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~ 149 (398)
.+.+.+.+.++.+. ++. ++++|+++++..++.+++++||+|+++.|.|.+ +...++..|.+++.+ +.
T Consensus 62 ~~~Le~~lA~l~g~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v-~~------ 132 (405)
T PRK08776 62 RDLLGEALAELEGG-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA-DL------ 132 (405)
T ss_pred HHHHHHHHHHHhCC-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE-CC------
Confidence 33444444444454 344 455666799999999999999999999999987 334455668888877 43
Q ss_pred CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc
Q 015890 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF 228 (398)
Q Consensus 150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~ 228 (398)
.|++.+++.+++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++| .+....+ ...+.++++.|.
T Consensus 133 ~d~~~l~~~i~~~t--klV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~~~p---l~~gaDivv~S~ 204 (405)
T PRK08776 133 TDPRSLADALAQSP--KLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPALQKP---LEFGADLVLHST 204 (405)
T ss_pred CCHHHHHHhcCcCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccccCCc---ccccCCEEEecC
Confidence 27889999998654 99999999999999988 999999999999999999999 3321111 122334888999
Q ss_pred ccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 229 SKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 229 sK~~~~~-G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
+|.++.+ +...|+++.++ +++.+++.........+.+++.++++...++ +++.+.+...+++..+.+.|++++
T Consensus 205 tK~l~g~~~~~~G~vv~~~--~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~----tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 205 TKYINGHSDVVGGAVVARD--AELHQQLVWWANALGLTGSPFDAFLTLRGLR----TLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred ceeecCCCCceEEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC----cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999744 46789888765 6777777665554455667777766665554 477888888999999999998877
Q ss_pred CCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC---------------
Q 015890 308 EGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC--------------- 352 (398)
Q Consensus 308 ~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~--------------- 352 (398)
.+. |..| ..+-.+.+.+.. +.+.+.+++++-.+.. .-|...
T Consensus 279 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~ 354 (405)
T PRK08776 279 AVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG----GEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMT 354 (405)
T ss_pred CeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC----CHHHHHHHHHhCCcceEccCCCCCceEEECCcccccccCC
Confidence 532 2221 113355566642 1233334444444322 111110
Q ss_pred -------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 353 -------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 353 -------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+ .++.||+|++- |+.+.+++.|.+++.++
T Consensus 355 ~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~~ 391 (405)
T PRK08776 355 AEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLARA 391 (405)
T ss_pred HHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence 0 13579999997 55666677777777654
No 215
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=4.7e-24 Score=199.72 Aligned_cols=286 Identities=20% Similarity=0.208 Sum_probs=195.2
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 141 (398)
+.+...++++.++++. |.+ ..++++|+++|+..++.+++++||+|+++.|.|.... ..++..|++++.+
T Consensus 63 ~~p~~~~le~~lA~l~----g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v- 135 (403)
T PRK07503 63 SNPTLALLEQRMASLE----GGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV- 135 (403)
T ss_pred CCchHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEe-
Confidence 3445667777777765 543 3566777889999999999999999999999986533 3456789998888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| .++...+. ..+
T Consensus 136 d~~------d~~~l~~~i~~~t--klV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~~l---~~g 201 (403)
T PRK07503 136 DLT------DPAALKAAISDKT--RMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQRPL---ELG 201 (403)
T ss_pred CCC------CHHHHHHhcCccC--cEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhC
Confidence 542 7899999998765 99999999999999999 899999999999999999999 44433222 123
Q ss_pred cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
.+++++|++|.++.+| .+.|+++.+ ++++++++.. ......++++..++.+...|+. +..+.++..++..
T Consensus 202 ~Di~v~S~tK~l~g~gd~~gG~v~~~---~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~ 274 (403)
T PRK07503 202 ADLVVHSATKYLGGHGDITAGLVVGG---KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT----LALRMDRHCASAQ 274 (403)
T ss_pred CCEEEccccccccCCCceeEEEEEcC---HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHH
Confidence 4588999999998655 778998866 7788877632 3333456666666555555543 5566666677888
Q ss_pred HHHHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe---cCCCC-----
Q 015890 298 IIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC----- 352 (398)
Q Consensus 298 ~l~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~---~g~~~----- 352 (398)
.+.+.|++++.+. +..|. .+-.+.+.+..+ .+...++..+..++.. -|...
T Consensus 275 ~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~----~~~~~~~~~~l~l~~~~~slG~~~sl~~~ 350 (403)
T PRK07503 275 AVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG----IAAGRRFMNALQLFARAVSLGDAESLAQH 350 (403)
T ss_pred HHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC----HHHHHHHHHhCCcceeecccCCCCccCcC
Confidence 8888888776532 21110 122344455421 2222333333333211 11100
Q ss_pred -----C-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 353 -----G-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 353 -----~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+ .++.||||++- |+.+.+++.|.+++.....
T Consensus 351 ~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al~~~~~ 399 (403)
T PRK07503 351 PASMTHSTYTPEERAEHGISEGLVRLSVGL---EDVADILADLAQALDACAV 399 (403)
T ss_pred CCCCccccCCHHHHHhcCCCCCeEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 0 13579999997 6777888888888876543
No 216
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=1.5e-23 Score=195.01 Aligned_cols=355 Identities=12% Similarity=0.040 Sum_probs=247.4
Q ss_pred ccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
..+...+..+.+.....++.++|--..|. .+|.+++++...+.+.-. -.|+-.....+++....+..++.++
T Consensus 32 ~~d~~~~~~~~~e~~rq~~~l~LiasEN~--~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~ 109 (493)
T PRK13580 32 HVEPRIAEAIRQELADQRSSLKLIASENY--SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG 109 (493)
T ss_pred hhCHHHHHHHHHHHHHHhcCceEeccccc--CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC
Confidence 45667777777777777899999988776 479999988776654211 2233355667788888888888899
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccC-------------------------------CCEEEEeCCCCcChhhH---HHh
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDA-------------------------------GDSVVMFAPYYFNSYMS---FQM 132 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~-------------------------------gd~Vl~~~p~~~~~~~~---~~~ 132 (398)
.+.-+|-.-+|+ .|+..++.++++| ||+|+..+..+.++... ...
T Consensus 110 a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~ 188 (493)
T PRK13580 110 AEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNI 188 (493)
T ss_pred CCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccch
Confidence 888788877766 8999999999876 79999887776554321 122
Q ss_pred cC--cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc
Q 015890 133 TG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY 209 (398)
Q Consensus 133 ~g--~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~ 209 (398)
.| .+...+ +.+.....+|++.+++.+++.+ +.|+++..+|- |...| +++|.++|+++|+++++|++| ++.
T Consensus 189 ~~~~~~~~~y-~vd~~~g~iD~d~l~~~~~~~~--plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gl 261 (493)
T PRK13580 189 SGKMFHQRSY-GVDPDTGLLDYDEIAALAREFK--PLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGL 261 (493)
T ss_pred hhheeeeEec-ccCcccCccCHHHHHHHHhhcC--CEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhce
Confidence 22 456666 6776556799999999999876 56666666665 44778 999999999999999999999 443
Q ss_pred CCCcc-----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-Cch
Q 015890 210 DGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPE 283 (398)
Q Consensus 210 ~~~~~-----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 283 (398)
-+... ... .+.+++++|+||++. |.+.|+++++ +++++.+.........++.++..++...++.. ...
T Consensus 262 igg~~~~~~~~~~-~~~D~vtgT~hKaL~--GP~GG~I~~~---~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ 335 (493)
T PRK13580 262 VAGKVFTGDEDPV-PHADIVTTTTHKTLR--GPRGGLVLAK---KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTP 335 (493)
T ss_pred eccccchhhcCCC-CCCcEEEeCChhhcc--CCCeEEEEec---HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCc
Confidence 22111 111 234588999999983 3445899988 78888775444333344555555555555543 222
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC------CCe
Q 015890 284 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGH 357 (398)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~ 357 (398)
...++++++.++.++|++.|.+.|+..+.+...+..+++.+.... .....+.+.|.+.||.+.+-..+.. +..
T Consensus 336 ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~-~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~sr 414 (493)
T PRK13580 336 EFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG-LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSG 414 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH-HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCce
Confidence 236678899999999999999888733333333677777876432 1233444455699999976554321 467
Q ss_pred EEEEecC-C----CHHHHHHHHHHHHHHHHHH
Q 015890 358 LRISFGG-L----VEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 358 iRi~~~~-~----~~~~~~~~~~~l~~~~~~~ 384 (398)
|||++.. + +++|++++++.|.++++..
T Consensus 415 LRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 415 IRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred EEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 9999775 2 4789999999999888754
No 217
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.94 E-value=2.4e-23 Score=193.51 Aligned_cols=326 Identities=16% Similarity=0.136 Sum_probs=226.0
Q ss_pred CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCc----HHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGL----PELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~----~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
++++++|+.++ -.+..+|++.++..+.+.+...+.-+ ...|. .++++.+++++ + .+..++++++..|
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g--~e~all~sSGy~A 174 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K--KEDCLVCPTGFAA 174 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C--CCcEEEECChHHH
Confidence 35789999876 45668999999998888664322111 11233 56777777776 3 4667888888899
Q ss_pred HHHHHHHhc--------------cCCCEEEEeCCCCcChhhHHHhc----CcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 102 FVNIVLTLC--------------DAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 102 ~~~~~~~l~--------------~~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
+..++.++. ++++.|+...-.|.+....++.. +++++.+ + +-|+++|+++++..+
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f-~------HND~~~Le~~L~~~~ 247 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVY-R------HCDMYHLNSLLSSCK 247 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEe-C------CCCHHHHHHHHHhCC
Confidence 999998872 45567888888898888887765 4666666 2 238999999986322
Q ss_pred -CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece----eccCCCccc---cccCCcEEEEcccccccCCC
Q 015890 164 -TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHC---CVEGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 164 -~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~----~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~ 235 (398)
..++|+++...++.|.+.| +++|.++|++||+++|+||+| ++..|.... ....+.+++++|++|++|+.
T Consensus 248 ~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~ 324 (476)
T PLN02955 248 MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH 324 (476)
T ss_pred CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence 2356666677899999999 999999999999999999999 333332221 11246779999999999776
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCC--CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPI--CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
| |+++++ +++++.+........+ ..+++..+++.++++.... ...+++++.++.+++++.+ |. .+
T Consensus 325 G---Gfi~gs---~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~-~~~~r~~L~~n~~~fr~~~---G~-~~-- 391 (476)
T PLN02955 325 G---GFIACS---KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK-EKWRRKAIWERVKEFKALS---GV-DI-- 391 (476)
T ss_pred C---ceeecH---HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhc---CC-CC--
Confidence 6 999998 7788877755443222 3344455555566654211 1245667777777887742 33 22
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+.++.+.+... ....++..+|+ ++||++.+..++.- ...+||+++. .+++|++++++.|.++......+
T Consensus 392 --~sPI~pI~ig~~-~~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~~ 465 (476)
T PLN02955 392 --SSPIISLVVGNQ-EKALKASRYLL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTA 465 (476)
T ss_pred --CCCEEEEEeCCH-HHHHHHHHHHH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcce
Confidence 144454555432 24556677775 88999988776543 3469999998 89999999999999887766543
No 218
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=1.7e-23 Score=195.62 Aligned_cols=285 Identities=20% Similarity=0.188 Sum_probs=197.2
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~ 141 (398)
+.+...++++.++++. | .++.+++++++.|+..++.+++++||+|+++...|.+ +...++..|++++.+
T Consensus 68 ~~p~~~~le~~lA~l~----g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v- 140 (403)
T PRK07810 68 GNPTVSMFEERLRLIE----G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV- 140 (403)
T ss_pred CCchHHHHHHHHHHHh----C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE-
Confidence 4455667777777765 4 3467888888899999999999999999998866644 345567789999988
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++++++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .+....+. ..+
T Consensus 141 d~------~d~~~l~~ai~~~t--klV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~~~---~~g 206 (403)
T PRK07810 141 DG------EDLSQWEEALSVPT--QAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQRGL---PLG 206 (403)
T ss_pred CC------CCHHHHHHhcCcCc--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hcC
Confidence 43 28899999998765 99999999999999999 999999999999999999999 44322221 223
Q ss_pred cEEEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (398)
.++++.|++|.++..|.++ |+++++ ++.+. .+.........++++..++.+...|+. +..+.++..++..+
T Consensus 207 aDivv~S~tK~l~g~g~~~gG~v~~~---~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----l~~R~~~~~~~a~~ 279 (403)
T PRK07810 207 ADVVVYSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----LALRVRHSNASALR 279 (403)
T ss_pred CcEEEccCCceecCCcCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHH
Confidence 4688999999998677776 778777 44443 455444444556777877777776665 66777778888888
Q ss_pred HHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCe-------------EEec
Q 015890 299 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV-------------VVIP 348 (398)
Q Consensus 299 l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi-------------~v~~ 348 (398)
+.+.|++++.+. |..| ..+-.+.+.+........+...+++++-.+ ...|
T Consensus 280 ~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p 359 (403)
T PRK07810 280 IAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHP 359 (403)
T ss_pred HHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCC
Confidence 888888877532 3322 124455566643110123333344433222 2223
Q ss_pred CCC----C--------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 349 GGA----C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 349 g~~----~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
++. + + .++.+|+|++- |+.+.+++.|.+++
T Consensus 360 ~~~~h~~~~~~~~~~~gi~~~lvR~svGl---E~~~dli~dl~~Al 402 (403)
T PRK07810 360 ATTTHRAMGPEGRAAIGLGDGVVRLSVGL---EDTDDLIADLDRAL 402 (403)
T ss_pred CccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 221 0 0 13579999997 66777777777765
No 219
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.5e-23 Score=193.92 Aligned_cols=290 Identities=17% Similarity=0.133 Sum_probs=204.3
Q ss_pred CCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCc
Q 015890 62 SKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGV 135 (398)
Q Consensus 62 ~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~ 135 (398)
+.|+. .+....+++.++++. + .+++++++|+++|+..++.+++++||+|++++|.|.++... ++..|+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi 126 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGI 126 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcce
Confidence 44655 344568888888764 2 24789999999999999999999999999999999777643 356788
Q ss_pred EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc
Q 015890 136 THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH 214 (398)
Q Consensus 136 ~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~ 214 (398)
++..+ +.. +.+.+++.+++++ ++|++++|+||||.+.+ +++|+++|+++|+++++|++| .+.. .
T Consensus 127 ~v~~v-~~~------~~e~l~~~l~~~T--klV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~~---~ 191 (394)
T PRK09028 127 ETTYY-DPM------IGEGIRELIRPNT--KVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPIN---S 191 (394)
T ss_pred EEEEE-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCcccccc---C
Confidence 88776 321 4578899888765 99999999999998877 999999999999999999999 4331 1
Q ss_pred ccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHH
Q 015890 215 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 293 (398)
Q Consensus 215 ~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (398)
.+...+.++++.|.+|+++ .+..-.|+++.+ +++.+.+.........+.++...+.+...|+. +.-+.+++.
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~ 264 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATAN---EKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT----LGVRLAQHE 264 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHH
Confidence 1223456799999999994 345677887766 66667666555545667777777766666665 677788889
Q ss_pred HHHHHHHHHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-
Q 015890 294 RNREIIREALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC- 352 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~- 352 (398)
+++..+.+.|++++.+ +|..| ..+-.+.+.+... +.+...+++++-.+.. .-|...
T Consensus 265 ~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~---~~~~~~~f~~~l~l~~~~~slG~~~s 341 (394)
T PRK09028 265 KNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQG---DPKAVTALVEGMQHFKMGFSWGGFES 341 (394)
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCC---CHHHHHHHHHhCCcceEecccCCCcc
Confidence 9999999999988753 33322 1133455566421 1233334444333222 111100
Q ss_pred -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+ .++.||+|++- |+.+.+++.|.+++.++.
T Consensus 342 Lv~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~~~ 389 (394)
T PRK09028 342 LILGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFERYN 389 (394)
T ss_pred eeECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHH
Confidence 0 12579999997 567777888888887654
No 220
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.94 E-value=1.2e-23 Score=194.86 Aligned_cols=278 Identities=22% Similarity=0.185 Sum_probs=194.9
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+...+++++++++. .++.++++++++++..++.+++++||+|+++.|+|+++...+ +..|++++.+
T Consensus 49 ~~p~~~~Le~~lA~l~-------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v- 120 (366)
T PRK07582 49 SNPTWRALEAALGELE-------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA- 120 (366)
T ss_pred CCccHHHHHHHHHHHc-------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEE-
Confidence 6677788888888875 234566667778999999999999999999999998876543 4579999988
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.++.. + .+.++ +++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| ... +..... .+
T Consensus 121 ~~~~~~-----~----~~~~~--t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~~p~~--~g 183 (366)
T PRK07582 121 PTAGMA-----E----AALAG--ADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQRPLE--LG 183 (366)
T ss_pred CCCChH-----H----HhccC--ceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-ccCchh--cC
Confidence 553221 1 22233 499999999999999888 999999999999999999998 322 221111 23
Q ss_pred cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.+++++|++|.++ .+|+++||++.++ +++++.+.........+++++..+.+...++. +..+.++..++...+
T Consensus 184 ~Divv~S~sK~l~G~~g~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----l~~R~~~~~~na~~l 257 (366)
T PRK07582 184 ADLVVASDTKALTGHSDLLLGYVAGRD--PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----LGLRFARQCANALAV 257 (366)
T ss_pred CcEEEecccccccCCCCeeEEEEEcCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----HHHHHHHHHHHHHHH
Confidence 3488899999994 4679999999864 67888887766655566677776666666654 456667777888889
Q ss_pred HHHhccCCCCc-ccc------C----------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------
Q 015890 300 REALSPLGEGA-VKG------G----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------- 353 (398)
Q Consensus 300 ~~~l~~~~~~~-~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------- 353 (398)
.+.|++++.+. +.. | ..+-.+.+.+. +. +...+++++.++.....+ ++
T Consensus 258 a~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~-~~~~~~~~~l~~~~~~~s-~G~~~sl~~~~ 331 (366)
T PRK07582 258 AELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DA-AAAERFVAASRLVVAATS-FGGVHTSADRR 331 (366)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CH-HHHHHHHHhCCcceeccc-CCCccchhhhH
Confidence 99998877632 221 1 02334555664 23 334445567776653111 11
Q ss_pred -------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 -------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.||+|++. |+.+.+++.|.++++.
T Consensus 332 ~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 332 ARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred HHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 13579999997 4556677777777754
No 221
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=7.5e-24 Score=197.53 Aligned_cols=283 Identities=21% Similarity=0.163 Sum_probs=193.0
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 141 (398)
+.+...++++.++++. +.+ ..++++++++|+..++.+++++||+|+++.|+|.+....+ +..|+++..+
T Consensus 59 ~~p~~~~Le~~lA~~~----g~~--~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~- 131 (388)
T PRK07811 59 GNPTRTALEEQLAALE----GGA--YGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV- 131 (388)
T ss_pred CCccHHHHHHHHHHHh----CCC--ceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe-
Confidence 4567788888888887 332 2344566789999999999999999999999998654433 3357777776
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+. .|++.+++.+++++ ++|++++|+||+|...+ +++|.++|+++|+++|+|++| .+....+. ..+
T Consensus 132 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~p~---~~g 197 (388)
T PRK07811 132 DL------SDLDAVRAAITPRT--KLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQPL---ALG 197 (388)
T ss_pred CC------CCHHHHHHhcCcCC--eEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCCch---hhC
Confidence 33 38899999998765 99999999999999888 999999999999999999999 44322222 123
Q ss_pred cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++.+| .+.||+++++ +++.+.+...........++...+.+...|+. +..+.++..++...+
T Consensus 198 aDivv~S~sK~l~g~~~~~gG~vv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----l~~R~~~~~~na~~l 271 (388)
T PRK07811 198 ADVVVHSTTKYIGGHSDVVGGALVTND--EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----LAVRMDRHSENAEAV 271 (388)
T ss_pred CcEEEecCceeecCCCCcEEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHH
Confidence 4588999999997543 5679988875 66777676555443444555554444444443 556667778888889
Q ss_pred HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890 300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC------- 352 (398)
Q Consensus 300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~------- 352 (398)
.+.|+.++.+. ++.|. .|-.+.+.+... .+...+++++-.+.. .-|...
T Consensus 272 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~ 347 (388)
T PRK07811 272 AEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG----EEAARDFCARTKVFTLAESLGGVESLIEHPS 347 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC----HHHHHHHHHhCCcceeeccCCCCcceEeCCc
Confidence 99998877532 22211 133556676421 222333444434322 111100
Q ss_pred ------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 353 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 353 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+ .++.||+|++- |+.+.+++.|.+++.
T Consensus 348 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 387 (388)
T PRK07811 348 AMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG 387 (388)
T ss_pred ccCcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence 0 13579999997 566777788877764
No 222
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6.8e-24 Score=197.26 Aligned_cols=283 Identities=22% Similarity=0.193 Sum_probs=196.6
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcCcEEEEecc
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGP 142 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~ 142 (398)
..+...++++.+++++ | .+++++++|+++|+..++.+++++||+|+++.+.|.+....+ +..|+++..+ .
T Consensus 51 ~np~~~~lE~~lA~l~----g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-~ 123 (385)
T PRK08574 51 ENPTLRPLEEALAKLE----G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-Y 123 (385)
T ss_pred CCccHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE-C
Confidence 3456678888888886 4 356788899999999999999999999999999998876655 4457777665 2
Q ss_pred CCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 143 CSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+|++.+++++++ + +++|++++|+||||.+++ +++|+++|+++|+++|+|++| .+....+. ..+
T Consensus 124 -------~d~~~l~~~i~~~~--tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~l---~~G 188 (385)
T PRK08574 124 -------PSTEDIIEAIKEGR--TKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLYRPL---RHG 188 (385)
T ss_pred -------CCHHHHHHhcCccC--ceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hhC
Confidence 367899999986 5 499999999999999999 889999999999999999999 44322211 234
Q ss_pred cEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++.+|-. .|+++.++ +++.+++.......+.++++...+.+...++. +..+.++..+++..+
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~--~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----L~~R~~~~~~na~~l 262 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWS--GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----LEVRFERQCRNAMAI 262 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHHHHHHHH
Confidence 568899999999755533 47666654 67778777666545555666555555555543 566667777788888
Q ss_pred HHHhccCCCCc-cccC------------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890 300 REALSPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----- 352 (398)
Q Consensus 300 ~~~l~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----- 352 (398)
.+.|+.++.+. |..| ..|..+.+++.. +.+.+.+++++-.+.. .-|...
T Consensus 263 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~----~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~ 338 (385)
T PRK08574 263 AEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG----GRDAVLKFLRSLKLIKPSPSLGGVESLATY 338 (385)
T ss_pred HHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC----CHHHHHHHHHcCCcceEccCCCCCcceeeC
Confidence 88888776532 2211 023455566642 1233334444444432 111111
Q ss_pred -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .++.||+|++- |+.+.+++.|.+++.+
T Consensus 339 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~ 384 (385)
T PRK08574 339 PVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS 384 (385)
T ss_pred CCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence 0 13579999997 6677788888888754
No 223
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2.2e-23 Score=196.86 Aligned_cols=328 Identities=14% Similarity=0.025 Sum_probs=216.7
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcC---CCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~---~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
++++.|+.+... +.|+.+.+++.+++.. .....+.. ......+.+.+.+ + ++++.++++|++++|+|++++.+
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL 102 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence 668999977655 4588999988876542 11111111 1122223333333 3 55688899999999999999999
Q ss_pred HHHhccCC---CEEEEeCCCCcChh----hHHHhcCcEE----EEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCC
Q 015890 106 VLTLCDAG---DSVVMFAPYYFNSY----MSFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNP 173 (398)
Q Consensus 106 ~~~l~~~g---d~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p 173 (398)
+.++.+++ +.|++...+|++.. ..++..|+++ +.+ +.+. ++.+|++.+++.++. .+++++|+++++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~~~v 180 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQI-EPRE-EETLRLEDILDTIEKNGDDIAVILLSGV 180 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEe-ccCC-CCccCHHHHHHHHHhcCCCeEEEEEecc
Confidence 99986554 36788888997733 3445678876 445 4433 345789999888852 123589999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~ 251 (398)
+|.||.++| +++|+++|+++|+++++|+++ ++..... ....+.+++++|.+|+++ .|| .|..+.+ +.
T Consensus 181 ~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~id--~~~~gvD~~~~s~hK~l~g~pG--~~l~v~~---~~- 249 (406)
T TIGR01814 181 QYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVPLD--LHDWGVDFACWCTYKYLNAGPG--AGAFVHE---KH- 249 (406)
T ss_pred ccccceecC---HHHHHHHHHHcCCEEEEEcccccCCcccc--cccCCCCEEEEcCccccCCCCC--eEEEEeh---hh-
Confidence 999999999 999999999999999999999 6543322 222345688999999884 344 3333333 22
Q ss_pred HHHHHHhhc-----------------------cCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccC-
Q 015890 252 ATQLLKVQD-----------------------NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPL- 306 (398)
Q Consensus 252 ~~~l~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~- 306 (398)
...+..... ....+++.+...++.++++.. ...+++..++...+.+++++.|++.
T Consensus 250 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 329 (406)
T TIGR01814 250 AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARC 329 (406)
T ss_pred hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 212211100 012456777777777777652 2235677777888888888888764
Q ss_pred ---CCCccccCCc----cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHH
Q 015890 307 ---GEGAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRL 377 (398)
Q Consensus 307 ---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l 377 (398)
+++.+..+.. +..+.+.++ .+..++...|. ++||.+... .++.||+|+ +. ++++|+++++++|
T Consensus 330 ~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~-~~gi~v~~~----~~~~iRiS~~~~~nt~~did~l~~~l 401 (406)
T TIGR01814 330 GGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALI-KRGVIGDKR----EPSVIRVAPVPLYNTFVDVYDAVNVL 401 (406)
T ss_pred CCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHH-HCCEEEecc----CCCeEEEechhccCCHHHHHHHHHHH
Confidence 2345554321 234555665 24667777774 789988532 357899998 44 7999999999999
Q ss_pred HHHH
Q 015890 378 RRGL 381 (398)
Q Consensus 378 ~~~~ 381 (398)
++.+
T Consensus 402 ~~~~ 405 (406)
T TIGR01814 402 EEIL 405 (406)
T ss_pred HHHh
Confidence 8764
No 224
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.93 E-value=1.2e-23 Score=195.93 Aligned_cols=215 Identities=21% Similarity=0.236 Sum_probs=161.4
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcCh----hhHHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 141 (398)
..+...++++.+++++ |. +.+++++|+++++..++.+++++||+|+++.+.|.+. ...++..|+++..+
T Consensus 52 ~~p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v- 124 (380)
T TIGR01325 52 ANPTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFV- 124 (380)
T ss_pred CCchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEE-
Confidence 3445567777777765 44 4678899999999999999999999999999888653 23567789998888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| ......+ ...+
T Consensus 125 ~~~------d~~~l~~~i~~~t--klV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~p---l~~g 190 (380)
T TIGR01325 125 DPT------DLNAWEAAVKPNT--KLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQP---LKLG 190 (380)
T ss_pred CCC------CHHHHHHhcCCCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhC
Confidence 542 6889999887754 99999999999999999 899999999999999999999 3222211 1223
Q ss_pred cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|++|.++.+|.++ |+++++ +++++.+.........+.++...+.+...++ .+..+.++..+++..+
T Consensus 191 ~Divv~S~sK~l~g~g~~~gG~vv~~---~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~----tl~~r~~~~~~~a~~l 263 (380)
T TIGR01325 191 ADVVVYSATKHIDGQGRVMGGVIAGS---EELMAEVAVYLRHTGPAMSPFNAWVLLKGLE----TLSLRMQKQFDSALAI 263 (380)
T ss_pred CCEEEeeccceecCCCCeEEEEEEeC---HHHHHHHHHHHHhhCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHH
Confidence 4588889999998777765 677777 6777777765544444445555444333333 3566777788888889
Q ss_pred HHHhccCCC
Q 015890 300 REALSPLGE 308 (398)
Q Consensus 300 ~~~l~~~~~ 308 (398)
.+.|+++|.
T Consensus 264 a~~L~~~p~ 272 (380)
T TIGR01325 264 AEWLQAQPQ 272 (380)
T ss_pred HHHHHcCCC
Confidence 999988775
No 225
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=8e-23 Score=192.40 Aligned_cols=360 Identities=16% Similarity=0.103 Sum_probs=226.9
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHH
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKK 80 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~ 80 (398)
+++-++..|.....-+.+.....++.+++....|.. +|.+++++...+.+....+++. .+...++.+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~ 82 (416)
T PRK13034 5 FSDSLEEYDDEVFAAINKELERQQDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER 82 (416)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence 466666666666666666665557888888877774 8999999988863211111211 12234444411114
Q ss_pred HhhhcCCCCCcE-EEecChHHHHHHHHHHhccCCCEEEEeCCCCcCh-hhHHHh--cCc--EEEEeccCCCCCCCCChHH
Q 015890 81 LNQENKLYKSSV-MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-YMSFQM--TGV--THILVGPCSSKTLHPDADW 154 (398)
Q Consensus 81 l~~~~~~~~~~v-~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~--~g~--~~~~~~~~~~~~~~~d~e~ 154 (398)
+++.+|.+ .. ++++||+.|+..++.+++++||+|+++..+|.+. ...++. .+. +...+ ..+..+..+|+++
T Consensus 83 la~l~g~~--~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~d~~~ 159 (416)
T PRK13034 83 AKQLFGCD--YANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY-GVDRLTGLIDYDE 159 (416)
T ss_pred HHHHhCCC--ceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEc-ccccccCCcCHHH
Confidence 55545643 44 4567889999999999999999999999999762 222221 122 11344 4444556689999
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEcccccc
Q 015890 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~ 231 (398)
+++.++... +++|++..+. +|...+ +.+|.++|+++|+++++|++| ++.- |...... ...+++++|++|+
T Consensus 160 le~~l~~~~-~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~-~~~Di~~~s~~K~ 232 (416)
T PRK13034 160 VEELAKEHK-PKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF-PHAHVVTTTTHKT 232 (416)
T ss_pred HHHHHhhcC-CeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC-CCceEEEEeCccc
Confidence 999986433 5888876543 467777 889999999999999999999 4332 3222222 2356889999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
++.+ ..|++++++ +.+...++...... ..+.+++..+++..++.. ......++++++.++.+++++.|++.|+
T Consensus 233 l~g~--~GG~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~- 307 (416)
T PRK13034 233 LRGP--RGGMILTND--EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY- 307 (416)
T ss_pred CCCC--CCeEEEECc--HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC-
Confidence 9422 247777764 45555555432211 112333344444433332 1122345678889999999999988765
Q ss_pred ccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC------CCCCCCeEEEEecC-----CCHHHHHHHHHHH
Q 015890 310 AVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACGCRGHLRISFGG-----LVEDDCKAAADRL 377 (398)
Q Consensus 310 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~~~~iRi~~~~-----~~~~~~~~~~~~l 377 (398)
.+..+ ..+..+++.+.....+...+...| ++.||.+.... ....+..+|++++. .+++|++++++.|
T Consensus 308 ~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l 386 (416)
T PRK13034 308 DLVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI 386 (416)
T ss_pred EeccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence 44432 236777777764333444555555 68899997521 11235679999554 3579999999999
Q ss_pred HHHHHHH
Q 015890 378 RRGLEEL 384 (398)
Q Consensus 378 ~~~~~~~ 384 (398)
.+++.+.
T Consensus 387 ~~~~~~~ 393 (416)
T PRK13034 387 LDVLDDL 393 (416)
T ss_pred HHHHhcC
Confidence 9887743
No 226
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=1.4e-23 Score=195.81 Aligned_cols=283 Identities=20% Similarity=0.195 Sum_probs=194.0
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 141 (398)
+.+...++++.++++. |. +..++++|+++++..++.+++++||+|+++.+.|.+.. ..+...|+++..+
T Consensus 57 ~~p~~~~le~~lA~l~----g~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v- 129 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLE----GT--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI- 129 (391)
T ss_pred CCchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE-
Confidence 3445566788887776 43 34677888889999999999999999999999886533 3456688888888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| .+..+.+. ..+
T Consensus 130 d~~------d~e~l~~~i~~~t--klV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~~~---~~g 195 (391)
T TIGR01328 130 NMA------IPEEVKAHIKDNT--KIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTNPV---ALG 195 (391)
T ss_pred CCC------CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCCch---hcC
Confidence 543 7889999998765 99999999999999999 889999999999999999999 44333221 123
Q ss_pred cEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
.++++.|++|.+|.+|.+ .|+++.+ +++++.++.... ......++...+.+...|+. +..+.++..++..
T Consensus 196 ~Divv~S~sK~lgg~g~~~gG~v~~~---~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t----l~~r~~~~~~na~ 268 (391)
T TIGR01328 196 VDVVVHSATKYIGGHGDVVAGLICGK---AELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT----LNIRMKRHSENAM 268 (391)
T ss_pred CCEEEccccccccCCCCceEEEEEcC---HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc----HHHHHHHHHHHHH
Confidence 448889999999877766 4677766 788877764321 22334555555555544543 4556777788888
Q ss_pred HHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890 298 IIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----- 352 (398)
Q Consensus 298 ~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----- 352 (398)
.+.+.|++++.+. +..| ..+-.+.+++.. +.+...+++++-.+.. .-|...
T Consensus 269 ~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~----~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~ 344 (391)
T TIGR01328 269 KVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG----GFAGAKKLLNNLKLIRLAVSLGDAETLIQH 344 (391)
T ss_pred HHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC----CHHHHHHHHHhCCcceEecCCCCCcccCcC
Confidence 8888888776532 2211 113345566642 1222333444434332 111110
Q ss_pred -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .++.||+|++- |+.+.+++.|.+++++
T Consensus 345 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 345 PASMTHAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDA 390 (391)
T ss_pred CCccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhh
Confidence 0 13579999997 6788888888888865
No 227
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=8.7e-24 Score=199.87 Aligned_cols=339 Identities=16% Similarity=0.112 Sum_probs=221.7
Q ss_pred HcCCCeEEcCCccCC--C-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVY--W-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~--~-~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|... + -.+|.+.+++.+++.+. ...|.+.....++.+.+.+.+ . ..+.+++++|+++|++
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~la~~L~~~~----~-~~~~v~~~~sGseA~e 120 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-LSFGAPTELEVELAELVIELV----P-SIEMVRMVNSGTEATM 120 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhC----C-CCCEEEEecCHHHHHH
Confidence 468899999987532 2 26899999999999774 233334444444444444432 2 2467999999999999
Q ss_pred HHHHHhcc--CCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCCC-CCCChHHHHHhhcc-CCCCe
Q 015890 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSKT-LHPDADWLEKTLET-KPTPK 166 (398)
Q Consensus 104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~-~~~d~e~l~~~l~~-~~~~~ 166 (398)
.+++.... .+++|+...++|+++...+... |. ....+ +..... ...|++.+++.+.. ...++
T Consensus 121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~l~~~i~~~~~~~a 199 (426)
T PRK00062 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDF-AKHTLTAPYNDLEAVEELFEEYGDEIA 199 (426)
T ss_pred HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccc-ccceEEcCCCCHHHHHHHHHhCCCcEE
Confidence 99998643 3578999999999986433221 10 00000 000000 01378899988852 23367
Q ss_pred EEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 167 LVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
+|+++.....+|.+.+ ++++++|.++|++||+++|+||+| +.. +........+....+.+++|.++ +|+++|+++
T Consensus 200 aiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~~~~~~~~~pDi~~~gK~l~-~G~p~ga~~ 277 (426)
T PRK00062 200 AVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGGAQGYYGVTPDLTTLGKIIG-GGLPVGAFG 277 (426)
T ss_pred EEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCccHHHHhCCCcchHhhhhHhh-CCCcceeee
Confidence 8888866666888765 888999999999999999999999 522 22111111111122468899998 889999998
Q ss_pred ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890 244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 318 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 318 (398)
.+ +++++.+... ....+++.+++.++++.++|+... +..++..+.....++.+.+.+++.+.+....+. +.
T Consensus 278 ~~---~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~-G~ 353 (426)
T PRK00062 278 GR---REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRV-GS 353 (426)
T ss_pred EH---HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe-cc
Confidence 88 7888877522 223456788999999988887522 344555555555566666665566653333455 44
Q ss_pred EEEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 319 ~~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
++.+.+..... + ...+...++ ++||.+.+.. .+.+++++. .+++++++++++|.+++.++
T Consensus 354 ~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 354 MFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ----FEAGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC----cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 44444432100 1 245666665 8899998742 346777765 59999999999999998764
No 228
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.3e-23 Score=195.86 Aligned_cols=287 Identities=17% Similarity=0.100 Sum_probs=196.7
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 142 (398)
.+...++++.++++. | .+++++++|+++|+..++.+++++||+|+++.|+|.++.. .++..|+++..+ +
T Consensus 64 ~pt~~~Le~~lA~l~----g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d 136 (394)
T PRK07050 64 TPTSLALAQRLAEIE----G--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY-D 136 (394)
T ss_pred CHHHHHHHHHHHHHh----C--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE-C
Confidence 344455666666554 5 4689999999999999999999999999999999988663 457789998888 4
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
.. +.+.+++.+++++ ++|++++|+||+|...+ +++|+++|+++|+++|+|++| .+..- .....+.
T Consensus 137 ~~------~~~~l~~~i~~~t--klV~le~p~Np~~~~~d---i~~I~~ia~~~gi~livD~a~a~~~~~---~~l~~Ga 202 (394)
T PRK07050 137 PL------IGAGIADLIQPNT--RLIWLEAPGSVTMEVPD---VPAITAAARARGVVTAIDNTYSAGLAF---KPFEHGV 202 (394)
T ss_pred CC------CHHHHHHhcCCCC--eEEEEECCCCCCccHhh---HHHHHHHHHHcCCEEEEECCccccccc---CHHHcCC
Confidence 32 4567888888765 99999999999987666 999999999999999999999 43211 1122234
Q ss_pred EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
++++.|++|.++. .+.+.|+++.++ ++++++++..+...+.+.++.....+...++. +..+.++..++..++.
T Consensus 203 Di~v~S~tK~~~g~~~~~gG~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----l~~Rl~~~~~~a~~la 276 (394)
T PRK07050 203 DISVQALTKYQSGGSDVLMGATITAD--AELHAKLKLARMRLGIGVSADDCSLVLRGLPS----LQVRLAAHDRSALEVA 276 (394)
T ss_pred eEEEEECCceecCCCCeeEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHH
Confidence 6889999999962 445689888765 77888887776655666666655444444433 4556677777777888
Q ss_pred HHhccCCCCc-cccC----------------CccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC--------
Q 015890 301 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG-------- 353 (398)
Q Consensus 301 ~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~-------- 353 (398)
+.|++.+.+. ++.| ..+..+.+.+.... .+..++++.| +..++.+.-|....
T Consensus 277 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~ 355 (394)
T PRK07050 277 EWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL-ELFAIGWSWGGACSLAMPYDVA 355 (394)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC-CCCeeccccCCccceEeeCccc
Confidence 8888766422 2211 11223444553211 2234455544 34454433332110
Q ss_pred ---------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 354 ---------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 354 ---------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++.||+|++- |+.+.+++.|.+++...
T Consensus 356 ~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 356 SMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEAA 392 (394)
T ss_pred ccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence 12579999997 66777888888888764
No 229
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.93 E-value=1.3e-23 Score=197.52 Aligned_cols=346 Identities=12% Similarity=0.097 Sum_probs=217.8
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCC-CCcEEE-ecChH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLY-KSSVMV-TAGAN 99 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~-~~~v~~-~~g~t 99 (398)
.+|+.++||..|. ..++ .+|.+.+++.+++.+... .+ ......+.+..+++.+.+.. +.. .+.+.+ +++++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs 109 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI-IH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGT 109 (412)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc-ee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCch
Confidence 4789999998764 3333 689999999999875211 11 11112345556666665432 111 124555 48999
Q ss_pred HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCCC-C-CCChHHHHHhhccC
Q 015890 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSKT-L-HPDADWLEKTLETK 162 (398)
Q Consensus 100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~-~-~~d~e~l~~~l~~~ 162 (398)
+|++.+++... ....+|+....+|++....+... |. .++.+ |.+... . .-+++.+++.++..
T Consensus 110 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 110 NAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRM-PYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred HHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEEC-CCCCccccchhHHHHHHHHHHhc
Confidence 99999999865 22368999999999977544322 11 11222 221100 0 01366788888631
Q ss_pred ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCC
Q 015890 163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 163 ----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 235 (398)
..+++|++...+++.|. .+|++.+++|.++|++||+++|+||++ ++..|........+....+.+++|.++..
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~ 268 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGY 268 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCC
Confidence 23688888877888998 578999999999999999999999999 65555332211111111234678999833
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-ch-HHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PE-WVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+++|+++.+ +++ +.+.......+++.++.+.+++.+.++. . ++ ..++..+.-.+.++.+.+..+.++.....
T Consensus 269 G~pigav~~~---~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~ 344 (412)
T TIGR02407 269 GLPLALTLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQ 344 (412)
T ss_pred ccceeEEEEc---hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEe
Confidence 9999999998 554 4443333445667778877776666662 1 22 22333333333344444444445421122
Q ss_pred cCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
....|+++|+.++... ....+...+. ++||.+.+... ..+.||++++. .+++++++++++|.+++++
T Consensus 345 vrg~Gl~~~l~l~~~~-~~~~~~~~~~-~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 345 VRGRGLMQGIECGDGD-LAGKIAKAAF-ENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred eecceeEEEEEecChH-HHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 2223888999997531 2445666664 89999987432 24689999888 8999999999999998853
No 230
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=2.6e-23 Score=196.87 Aligned_cols=352 Identities=15% Similarity=0.131 Sum_probs=226.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+... +.......+....+++.+.+..+.. .+.|++++++++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~ 116 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAN 116 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 4689999997763 2333 589999999999876321 1111122345556666666554422 25799999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cCc-------------EEEEeccCCCC-C--C-CCC-------hHHH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-T--L-HPD-------ADWL 155 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~--~-~~d-------~e~l 155 (398)
+.+++... ....+|+....+|++....+-. .+. .+..+ |.++. . + ..+ ++.+
T Consensus 117 e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK08593 117 DGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHI-PFPDKYRGMYEEPDANFVEEYLAPL 195 (445)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccccccCCcHHHHHHHHHHH
Confidence 99999753 2235799999999987643321 110 12223 22111 0 0 011 2344
Q ss_pred HHhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890 156 EKTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS 229 (398)
Q Consensus 156 ~~~l~~---~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s 229 (398)
++.++. ...+++|+++..++..|.+ .|++.++++.++|++||+++|+||++ ++..|........+....+.+++
T Consensus 196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g 275 (445)
T PRK08593 196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG 275 (445)
T ss_pred HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec
Confidence 444431 2337889999888888886 78889999999999999999999999 66655432211111112244889
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
|.++ .|+++|+++++ +++++.+.......+++.++...+++.+.|+..+ +.+++..+.....++.+.+..++++
T Consensus 276 K~l~-~G~p~gav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 351 (445)
T PRK08593 276 KSLA-GGMPMSAIVGR---KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN 351 (445)
T ss_pred cccc-CCcccEEEEEc---HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9998 78999999999 7888877543444567788888888888887522 2333333444444555555444555
Q ss_pred CCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 308 EGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
.+.-+... |.++.+.+.... .....++..++ ++||++.+. ..+.+|++++. .+++|++++++++.+
T Consensus 352 ~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~ 425 (445)
T PRK08593 352 FVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV----AGNVLRFQPPLVITYEQLDTALNTIEQ 425 (445)
T ss_pred cEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc----CCCEEEEECCCccCHHHHHHHHHHHHH
Confidence 54444455 455555553210 01235666664 799999663 24689999888 899999999999999
Q ss_pred HHHHHhcccccc
Q 015890 380 GLEELVKDGMVQ 391 (398)
Q Consensus 380 ~~~~~~~~~~~~ 391 (398)
+++++.+..-++
T Consensus 426 ~l~~~~~~~~~~ 437 (445)
T PRK08593 426 AFTALEAGKLDQ 437 (445)
T ss_pred HHHHHhccccCC
Confidence 999886644333
No 231
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=4.6e-23 Score=196.43 Aligned_cols=356 Identities=15% Similarity=0.075 Sum_probs=232.2
Q ss_pred hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-----CC-CCcHHHHHHHHHHHhhh
Q 015890 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-----AD-EGLPELRDALVKKLNQE 84 (398)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~-~~~~~~~~~l~~~l~~~ 84 (398)
+...|.....-+.+.....++.++|....|. .+|.+++++...+.+.-..+++ .. .....+.+...+.+.+.
T Consensus 15 ~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l 92 (452)
T PTZ00094 15 LKEADPELYELIEKEKERQIEGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEA 92 (452)
T ss_pred HhhhCHHHHHHHHHHHHHHHcCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 4344555555554444445789999988776 4799999988877542111222 11 11233332334456666
Q ss_pred cCCCCCcEEEe---cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----------cCcEEEEeccCCCCCCCCC
Q 015890 85 NKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----------TGVTHILVGPCSSKTLHPD 151 (398)
Q Consensus 85 ~~~~~~~v~~~---~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d 151 (398)
++.+++++.++ +|+++++..++.++.++||+|++....|.++...+.. .++++..+ +.+.+ +.+|
T Consensus 93 f~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~-~~~~~-g~id 170 (452)
T PTZ00094 93 FGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY-QVNEK-GLID 170 (452)
T ss_pred hCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeec-ccCCC-CCcC
Confidence 68877777677 7899999999999999999999988888665543311 11334444 45544 4789
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccccCCcEEEEccc
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCVEGDHVVNLFSF 228 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~~~~~~i~~~s~ 228 (398)
+++|++.++... ++++++. ++.+|...| +++|.++|+++|+++++|++| ++.-+... ... .+.+++++|.
T Consensus 171 ~~~L~~~l~~~~-~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S~ 243 (452)
T PTZ00094 171 YDKLEELAKAFR-PKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTTT 243 (452)
T ss_pred HHHHHHHHHHhC-CCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcCC
Confidence 999999997533 4777664 345999999 889999999999999999999 55432211 111 1356889999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 302 (398)
+|+++ |.+.|+++.++ ++.+.+.. ....+..+.+....+++.++++.. ....+++.+++.++++++.+.
T Consensus 244 hK~l~--GP~Gg~l~~~~---~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 244 HKSLR--GPRSGLIFYRK---KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred ccCCC--CCCceEEEEec---ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99883 33347777763 33322211 111222356667777777777753 234567788889999999999
Q ss_pred hccCCCCccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-cCCCCC----CCCeEEEEecC-CC----HHHHH
Q 015890 303 LSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACG----CRGHLRISFGG-LV----EDDCK 371 (398)
Q Consensus 303 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~----~~~~iRi~~~~-~~----~~~~~ 371 (398)
|.+.+. .+..+ ......++.+.....+..++...| +++||.+. ++..+. .++.||+|++. ++ ++|++
T Consensus 319 L~~~g~-~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~ 396 (452)
T PTZ00094 319 LEKRGY-DLVTGGTDNHLVLVDLRPFGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK 396 (452)
T ss_pred HHhCCc-EEecCCCCCceEeecCCcCCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence 977654 44432 112335555544333555566654 68899994 443332 35789999866 33 89999
Q ss_pred HHHHHHHHHHHHH
Q 015890 372 AAADRLRRGLEEL 384 (398)
Q Consensus 372 ~~~~~l~~~~~~~ 384 (398)
++++.|.+.++..
T Consensus 397 ~l~~~l~~~~~~~ 409 (452)
T PTZ00094 397 FVADFLDRAVKLA 409 (452)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 232
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.93 E-value=3.8e-23 Score=194.25 Aligned_cols=343 Identities=12% Similarity=0.113 Sum_probs=224.4
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..| ...++ .+|.+.+|+.+++.+.... ......+.+..+++.+....+...+.+++++++++|++
T Consensus 72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~---~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e 148 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH---SQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc---ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 357889999887 44454 5899999999998763211 11122445566666666554433467999999999999
Q ss_pred HHHHHhcc----CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCC-C--CCCChHHHHHhhc----cCCCCeEE
Q 015890 104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK-T--LHPDADWLEKTLE----TKPTPKLV 168 (398)
Q Consensus 104 ~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~-~--~~~d~e~l~~~l~----~~~~~~~v 168 (398)
.+++.... .| .+|+....+|++....+-....+... +.|.... . -..|.+.+++.++ ....+++|
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAav 228 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI 228 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEE
Confidence 99997642 24 68999999999977544333211110 0011110 0 0126677777664 22336888
Q ss_pred EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEc
Q 015890 169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAY 244 (398)
Q Consensus 169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~ 244 (398)
+++..+...|.. .|++.++++.++|++||+++|+||++ |+..|........+....+.+++|.+| .| +++|.+++
T Consensus 229 IvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg-~G~~Pigavv~ 307 (442)
T TIGR03372 229 ILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALG-GGVMPIGATIA 307 (442)
T ss_pred EEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhc-CCcccceEEEe
Confidence 888777777875 46888999999999999999999999 655554322222221122336899998 78 68999998
Q ss_pred cCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEE
Q 015890 245 PSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIY 319 (398)
Q Consensus 245 ~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~ 319 (398)
+ +++.+.+.. .....+++.|+.+.+++.+.|+..+ +..++..+.-...++.|.+...+.+ .+.-+... |.+
T Consensus 308 ~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~-Gl~ 383 (442)
T TIGR03372 308 T---EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK-GLL 383 (442)
T ss_pred c---HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc-eEE
Confidence 8 677776632 2334567778999999999887522 2233333444444555555444455 22223344 777
Q ss_pred EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+.+.+.+. .....++..++ ++||++.+... ..+.+|+.+.. .+++++++++++|.+++
T Consensus 384 ~giel~~~-~~~~~i~~~l~-~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 384 MAIEFRDN-EIGYAFAKELF-QQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEEeCCh-HHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 77887542 12456677765 78999975321 24689999887 79999999999998763
No 233
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=8.6e-23 Score=189.44 Aligned_cols=308 Identities=18% Similarity=0.273 Sum_probs=205.1
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~ 123 (398)
+++.++++.+.+..++..+ . .++++++.+++.+.++ .+++++++|+|+|+..++.++ +++||+|+++.++|
T Consensus 10 ~~~e~~a~~~~~~~~~~~~--~----g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~ 81 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLSG--D----GPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (376)
T ss_pred CHHHHHHHHHHHHcCCccC--C----cHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence 4666888888876643221 1 2355666666655555 467999999999999999888 79999999999999
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
......+...|++++.+ +.+++++.+|++.+++.+++++ ++|+ |+||+|...+ +++|.++|+++|+++|+|
T Consensus 82 ~~~~~~~~~~G~~~v~v-d~d~~~~~~d~~~le~~i~~~t--k~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIESAITHRT--KAIV---PVHYAGVACD---MDTIMALANKHQLFVIED 152 (376)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence 99988889999999999 8888888899999999998754 8886 5678999998 889999999999999999
Q ss_pred ece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------
Q 015890 204 NTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------- 261 (398)
Q Consensus 204 e~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~----------------- 261 (398)
++| ++ +.+.+.... .+ +.++|+ +|.+. +|.+.|++++++ +++.++++.++..
T Consensus 153 aa~~~g~~~~~~~~g~~-~~--~~~fSf~~~K~l~-~g~~gG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 226 (376)
T TIGR02379 153 AAQGVMSTYKGRALGSI-GH--LGTFSFHETKNYT-SGGEGGALLIND--QAFIERAEIIREKGTNRSQFFRGEVDKYTW 226 (376)
T ss_pred CccccCCccCCcccCCC-CC--EEEEeCCCCCcCc-ccCCceEEEECC--HHHHHHHHHHHHhCCCCccccccCCCccee
Confidence 999 43 455433221 12 334444 47775 677889988886 7888887765431
Q ss_pred ----CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CCcccc-CCc---c-EEEEeeCCCCCC
Q 015890 262 ----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVKG-GEG---A-IYLWARLPEKHL 329 (398)
Q Consensus 262 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~-~~~---~-~~~~~~~~~~~~ 329 (398)
..+.++.+..+.+...|+. +++..+.-++..++..+.|..+. ...... +++ . .++++.++.. .
T Consensus 227 ~~~g~n~~~~~~~Aa~g~~qL~~----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 301 (376)
T TIGR02379 227 RDIGSSYLPSELQAAYLWAQLEQ----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-D 301 (376)
T ss_pred eeecccCCccHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-C
Confidence 1112233333333334443 34444444444444555554432 111110 111 1 2345666543 2
Q ss_pred ChHHHHHHHHHhcCeEEecCCCC----------C--C----------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGAC----------G--C----------RGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~----------~--~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+..++...| +++||.++..... . . ...+.+-+.. .++++++..++.|++++
T Consensus 302 ~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 302 DRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 567777766 5899988743211 0 0 1246666555 78899999999888754
No 234
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.93 E-value=1.3e-22 Score=189.09 Aligned_cols=328 Identities=19% Similarity=0.147 Sum_probs=203.8
Q ss_pred CCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-------CCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890 30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-------ISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 30 ~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-------~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
.++++|+.++ -++..+|.+.+++.+++.+.. .+..+. ..|..+..+.+.+.+.++++.+ +.+++++ ++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~s-G~ 81 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPS-GY 81 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECC-hH
Confidence 4678888776 455567777777666654421 111111 1223344444444444444653 3355555 44
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN 175 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~n 175 (398)
.++..++..+.++||.|++..-.|......++......+.+ + ..|+++|++.++.. +...+|++++++|
T Consensus 82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s 154 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVYS 154 (370)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence 77777666666778888888888877776666554333334 2 34889999988731 1235777889999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc-cc-CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC-VE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~-~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
++|.+.| +++|.++|+++|+++++||+| ++. ++..... .. .+.++++.|+||.+|+.| +.++.. +
T Consensus 155 ~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~---~ 225 (370)
T PRK05937 155 FKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSS---S 225 (370)
T ss_pred CCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcC---H
Confidence 9999999 999999999999999999999 443 2211110 11 122366889999998666 334444 3
Q ss_pred HHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 250 GFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 250 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
+....+... ...+..+.+++...++.++++...+..+...++++++++++.+.|...+. +....+.++.
T Consensus 226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~--------~~~~~i~~~~- 296 (370)
T PRK05937 226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP--------GCVQPIFLPG- 296 (370)
T ss_pred HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC--------CCEEEEEeCC-
Confidence 444444321 11233445666666666666542222234556777778888887754321 0111233332
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+..++...| .++||.+..... ...+.+|++++. .+++|++++++.|.+.++++.++
T Consensus 297 -~~~~~~~~~L-~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 297 -ISEQELYSKL-VETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred -hhHHHHHHHH-HHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 1345566655 588998874332 235689999998 89999999999999999887654
No 235
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-22 Score=189.76 Aligned_cols=310 Identities=14% Similarity=0.104 Sum_probs=208.5
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~ 123 (398)
+++-.+++.+.+..... + ..+...++++.+++++ |. +++++++|+|+|+.+++.++ +++||+|+++.++|
T Consensus 13 ~~~e~~~~~~~l~~~~~--~-~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~ 83 (379)
T PRK11658 13 GDEELAAVKEVLRSGWI--T-TGPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW 83 (379)
T ss_pred CHHHHHHHHHHHHcCCc--c-CCHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence 45667788887765432 2 3455788999999988 43 46788999999999999999 79999999999999
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
.++...+...|++++.+ +.+.+++.+|++.+++.+++++ ++|+ |+|++|...+ +++|.++|+++|+++|+|
T Consensus 84 ~~~~~~~~~~G~~~v~v-d~~~~~~~~d~~~l~~~i~~~t--kav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 84 VSTLNMIVLLGATPVMV-DVDRDTLMVTPEAIEAAITPRT--KAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcccCC--eEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence 99988899999999999 8887777899999999998765 8887 5567999988 889999999999999999
Q ss_pred ece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------------
Q 015890 204 NTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------------ 262 (398)
Q Consensus 204 e~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~------------------ 262 (398)
++| ++ +.+..... .+..++.++.+|.+ ++.+.|+++.++ +++.++++......
T Consensus 155 ~a~a~g~~~~~~~~g~--~g~~~~Sf~~~K~l--~~g~GG~v~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 155 AAHAVGTYYKGRHIGA--RGTAIFSFHAIKNI--TCAEGGLVVTDD--DELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred CCCccCCeECCeecCC--CCCEEEeCCCCCcC--cccCceEEEECC--HHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 999 43 33322222 22244444445655 456778888775 67777776543110
Q ss_pred ----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----cc-EEEEeeCCCC--CCCh
Q 015890 263 ----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARLPEK--HLDD 331 (398)
Q Consensus 263 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~--~~~~ 331 (398)
.++.......++..... ...+++..++.+++.+++.+.|++++...+..+. .. ..+.+.++.. ..+.
T Consensus 229 ~~~~G~n~~~~~l~AAl~~~q--l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 306 (379)
T PRK11658 229 VLTPGYKYNLADINAAIALVQ--LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISR 306 (379)
T ss_pred eeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCH
Confidence 00111111122222221 1345666777777788888888887653332221 12 1223344321 2356
Q ss_pred HHHHHHHHHhcCeEEecCCC-------CC--------------CCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGA-------CG--------------CRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~-------~~--------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
.++.+.| +++||.+..... |. ....+-+-+.. .++++++..++.|++++
T Consensus 307 ~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 307 DALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 7788877 588987653220 00 01345555555 78899999999988865
No 236
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.93 E-value=3.3e-23 Score=195.68 Aligned_cols=346 Identities=13% Similarity=0.130 Sum_probs=215.4
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEE-ecChH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMV-TAGAN 99 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~-~~g~t 99 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+... .+ ......+.+..+++.+.+.... ..+ .+++ ++||+
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs 113 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI-TH-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT 113 (425)
T ss_pred CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc-cc-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence 4689999998774 3333 689999999998875211 11 1111234455566665543211 112 4655 47999
Q ss_pred HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C---------c---EEEEeccCCCCC-C-CCChHHHHHhhccC
Q 015890 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G---------V---THILVGPCSSKT-L-HPDADWLEKTLETK 162 (398)
Q Consensus 100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g---------~---~~~~~~~~~~~~-~-~~d~e~l~~~l~~~ 162 (398)
+|++.+++... ....+|+....+|++....+-.. | . .+..+ |.+... . .-|++.+++.++..
T Consensus 114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM-PYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEe-CCCCccccchhHHHHHHHHHHhc
Confidence 99999999864 22368999999999976433222 1 0 12223 222100 0 02677888888531
Q ss_pred ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCC
Q 015890 163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 163 ----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 235 (398)
..+++|+++..++..|. +++++.+++|.++|++||+++|+||++ ++..|........+....+.+++|.++..
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~ 272 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGY 272 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCC
Confidence 23678888877777787 568889999999999999999999999 65555322111111111134778999855
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHh----ccCCCC-
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREAL----SPLGEG- 309 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~- 309 (398)
|+++|+++++ +++ ..+.......+++.++++.+++.++++. ..+ .+..++++++.+++.+.| ++.+.+
T Consensus 273 G~pigav~~~---~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~ 346 (425)
T PRK09264 273 GLPMALVLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLG 346 (425)
T ss_pred ccceEEEEEc---hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 9999999998 554 3333323344566777777777677732 111 123333444444444333 334432
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.-.... +.++++.++.. .....++..+. ++||.+.+...+ ...||+++.. .+++++++++++|.++++++.+
T Consensus 347 ~~vrg~-Gl~~~i~l~~~-~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 347 AEVRGR-GMMQGIDFGDG-ELAGKIAAEAF-ENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred ecceec-ccEEEEEecCh-HHHHHHHHHHH-HCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112223 77788888642 12445666664 889999875322 3689999775 7899999999999999988654
No 237
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.93 E-value=9.2e-23 Score=193.04 Aligned_cols=348 Identities=13% Similarity=0.118 Sum_probs=226.3
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..| ...++ .+|++.+|+.+++.+... + ......+.+..+++.+....+...+.+++++++++|++
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~--~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve 155 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL--H-SQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc--c-ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHH
Confidence 357889999887 44444 589999999999876322 1 11222445566666666554433467999999999999
Q ss_pred HHHHHhcc----CC-CEEEEeCCCCcChhhHHHhcCcEE-EE--eccCCCCC---CCCChHHHHHhhcc----CCCCeEE
Q 015890 104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQMTGVTH-IL--VGPCSSKT---LHPDADWLEKTLET----KPTPKLV 168 (398)
Q Consensus 104 ~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~g~~~-~~--~~~~~~~~---~~~d~e~l~~~l~~----~~~~~~v 168 (398)
.+++.... +| .+|+....+|++....+-...... .. +.+..+.- -..|.+.+++.++. ...+++|
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav 235 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV 235 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence 99997641 23 479999999999775443322111 00 00111100 01267888887752 2336788
Q ss_pred EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEc
Q 015890 169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAY 244 (398)
Q Consensus 169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~ 244 (398)
+++..+...|.+ .|++.++++.++|++||+++|+||++ ++..|........+....+.+++|.+| .| +++|.+++
T Consensus 236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg-gG~~Pigav~~ 314 (459)
T PRK11522 236 ILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALG-GGVMPIGATIA 314 (459)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhh-CCCccceeEEE
Confidence 888777778885 57778999999999999999999999 555554322221111122338899998 67 68999999
Q ss_pred cCCcHHHHHHHH--HhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEE
Q 015890 245 PSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIY 319 (398)
Q Consensus 245 ~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~ 319 (398)
+ +++.+.+. ......+++.++.+.+++.+.|+..+ +..++..+.-...++.|.+..++++ .+.-+... +.+
T Consensus 315 ~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~-Gl~ 390 (459)
T PRK11522 315 T---EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK-GML 390 (459)
T ss_pred c---HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec-eeE
Confidence 8 77777653 22334566778999988888887522 2233333333333444443333344 22223344 677
Q ss_pred EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.+.+... .....+...++ ++||.+.+.. ...+.+|+.++. .+++++++++++|.++++++.+
T Consensus 391 ~giel~~~-~~~~~i~~~l~-~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 391 MAIEFVDN-EIGYNFASEMF-RQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred EEEEecCc-hHHHHHHHHHH-HCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 77777542 12445666665 7999997642 134789999887 8999999999999999988654
No 238
>PRK07482 hypothetical protein; Provisional
Probab=99.93 E-value=1.3e-22 Score=192.68 Aligned_cols=347 Identities=13% Similarity=0.012 Sum_probs=229.8
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|.. .++ .+|++.+++.+++.+.. .+.. .....+.+..+++.+.+..+.+-+.+++++++++|+
T Consensus 47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~--~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAv 124 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA--YYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN 124 (461)
T ss_pred CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC--ccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence 46899999998753 332 58999999999997632 1111 112245566677777665443346799999999999
Q ss_pred HHHHHHhc------c-C-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-C-----C------C
Q 015890 103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-T-----L------H 149 (398)
Q Consensus 103 ~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~-----~------~ 149 (398)
+.+++... . + ..+|+....+|++....+-.... .+..+ +.+.. . . .
T Consensus 125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 203 (461)
T PRK07482 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHT-EAPHYYRRADAGMSEEQFSA 203 (461)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEc-CCCccccccccCCCHHHHHH
Confidence 99999864 1 2 25799999999996543222110 11111 11110 0 0 0
Q ss_pred CChHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890 150 PDADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 150 ~d~e~l~~~l~-~-~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~ 224 (398)
-+++.+++.+. . ...+++|+++..+...|.+ .+++.+++|.++|++||+++|+||++ |+..|........+....
T Consensus 204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC
Confidence 03567788774 2 2337889999777777876 57789999999999999999999999 666664433322222223
Q ss_pred EcccccccCCCcc-eeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHH
Q 015890 225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVR 294 (398)
Q Consensus 225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~ 294 (398)
+-+++|.++ .|+ ++|.++++ +++.+.+.. .....+++.|+.+.+++.+.|+.. ++.+++..+.-..
T Consensus 284 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~ 359 (461)
T PRK07482 284 LITVAKGLT-SAYAPLSGSIVG---EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAY 359 (461)
T ss_pred EEEEccccc-cCccccceeeec---HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 346789997 775 89999988 677776642 123457788999999999998752 2334444444555
Q ss_pred HHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890 295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 364 (398)
..+.+.+.+++++.+.-+... |.++.+.+.+... + ...++..++ ++||++.++. ..+.+|+.++.
T Consensus 360 l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~---~~~~i~~~Ppl 434 (461)
T PRK07482 360 FRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP---HGDILGFAPPL 434 (461)
T ss_pred HHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC---CCCEEEEeCCC
Confidence 566666666667654445555 6666677643110 0 234566665 8999986532 24679998666
Q ss_pred -CCHHHHHHHHHHHHHHHHHHh
Q 015890 365 -LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+++|+++++++|.++++++.
T Consensus 435 ~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 435 VLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999998864
No 239
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.3e-22 Score=189.60 Aligned_cols=336 Identities=14% Similarity=0.079 Sum_probs=220.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ..++ .+|++.+++.+++.+.. +.+ .....+....+++++.+..+ .+.+++++|+++|++
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~--~~~~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e 107 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPS--PAFYNEPMAKLAGLLTQHSC--FDKVFFANSGAEANE 107 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-ccc--ccccCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHH
Confidence 4789999998753 3333 47999999999987532 112 12335677788888875433 467999999999999
Q ss_pred HHHHHhcc------CC-CEEEEeCCCCcChhhHH-HhcCcEEEE--eccCCCCCC----CCChHHHHHhhccCCCCeEEE
Q 015890 104 NIVLTLCD------AG-DSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSKTL----HPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 104 ~~~~~l~~------~g-d~Vl~~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~~~----~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.+++.+.. +| .+|+..+.+|++..... ...|..... +.|.. .++ ..|++.+++.+.++ +++|+
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~aavi 184 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV-PGFPKAELNDIASVEKLITDK--TVAVM 184 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC-CCceeeCCchHHHHHHHcCCC--ceEEE
Confidence 99998751 23 57999999998865433 222321110 00111 111 24789999988754 58899
Q ss_pred EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 170 i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
++..++..|.+. +++.+++|.++|++||+++|+||++ ++..|........+....+.+++|.+| .|+++|.++++
T Consensus 185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg-~G~p~~av~~~- 262 (395)
T PRK03715 185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIG-GGVPLAALLAK- 262 (395)
T ss_pred EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhh-CCcceEEEEEc-
Confidence 987788888864 6889999999999999999999999 655554322211111122457889998 67999999988
Q ss_pred CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890 247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324 (398)
Q Consensus 247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (398)
+++.. +.......+++.++...+++.+.|+... +..++..+.....++.+.+...+.+. ...... +.++.+.+
T Consensus 263 --~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~i-~~vrG~-Glm~~i~l 337 (395)
T PRK03715 263 --AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGL-EGERGE-GLLRALLL 337 (395)
T ss_pred --ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCCc-CeEEcc-eeEEEEEe
Confidence 45532 2222223466778888888888887522 22333333333334444443334443 333445 67777777
Q ss_pred CCCCCChHHHHHHHHHhc---CeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 325 PEKHLDDFEVVRWLAHRH---GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
... ....+... +.+. ||.+.+. .++.+|+++.. .+++++++++++|.++++++
T Consensus 338 ~~~--~~~~~~~~-~~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 338 GKD--IGPQIVEK-ARDMQPDGLLLNAP----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cCc--hHHHHHHH-HHhccCCCEEEeec----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 532 12334433 3355 9998653 24689999888 89999999999999998764
No 240
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.93 E-value=1e-22 Score=193.03 Aligned_cols=348 Identities=11% Similarity=0.110 Sum_probs=217.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCc-EEEecChHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSS-VMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~-v~~~~g~t~ 100 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... .+ ......+.+..+++.+....+.. ... +++++++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE 113 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP-LH-TLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD 113 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC-cc-ccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence 4789999998775 3333 589999999999876321 11 11122355666777776655321 124 455689999
Q ss_pred HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCC-CC--C----CCh----HH
Q 015890 101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-TL--H----PDA----DW 154 (398)
Q Consensus 101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~~--~----~d~----e~ 154 (398)
|++.+++... ....+|+....+|++....+... |. .+..+ +.+.. .. . .+. +.
T Consensus 114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 192 (442)
T TIGR00709 114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFM-PYPHEYRCPFGIGGEAGSNASIEY 192 (442)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence 9999999764 22368999999999977544332 10 12222 21110 00 0 011 22
Q ss_pred HHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcc
Q 015890 155 LEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 155 l~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s 227 (398)
+++.++ ....+++|+++..++..|. .+|+++++++.++|++||+++|.||++ |++.|........+....+-+
T Consensus 193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 272 (442)
T TIGR00709 193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV 272 (442)
T ss_pred HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE
Confidence 344442 1123688888876666666 479999999999999999999999999 766664332221111122234
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhcc
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSP 305 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~ 305 (398)
++|.++ .|+++|+++.+ ++ ++.+.......+++.++.+++++.+.|+.. + +..++..+.-....+.+.+..++
T Consensus 273 ~gK~l~-~G~Pigav~~~---~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~ 347 (442)
T TIGR00709 273 MSKAVG-GGLPLAVLLIA---PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKE 347 (442)
T ss_pred Eccccc-CCcccEEEEEc---hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 799998 58999999998 55 344333333467788999999999999752 2 22232222333334444444345
Q ss_pred CCCCccccCCccEEEEeeCCCCCC-------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH
Q 015890 306 LGEGAVKGGEGAIYLWARLPEKHL-------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK 371 (398)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~ 371 (398)
++.+.-+... |.++.+.+.+... -...+...+ .++||++.+... ..+.||+.++. .++++++
T Consensus 348 ~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~ 423 (442)
T TIGR00709 348 HPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETGGR--EGEVFRLLCPITIDQEECE 423 (442)
T ss_pred CCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeecCC--CCCEEEEECCCCCCHHHHH
Confidence 5554445555 6666666632210 023345545 489999976432 24789998887 8999999
Q ss_pred HHHHHHHHHHHHHhc
Q 015890 372 AAADRLRRGLEELVK 386 (398)
Q Consensus 372 ~~~~~l~~~~~~~~~ 386 (398)
++++++.+++.++.+
T Consensus 424 ~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 424 EGISRFKQAVEEALA 438 (442)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 241
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=1.5e-22 Score=188.19 Aligned_cols=301 Identities=17% Similarity=0.127 Sum_probs=205.6
Q ss_pred HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChhh
Q 015890 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYM 128 (398)
Q Consensus 50 ~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~~ 128 (398)
+++.+.+.... |...+...++++.+++++ + .+++++++|+|+++..++.++ .++||+|+++.++|++...
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~----~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYL----G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN 73 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence 44555554432 334556678888888887 4 256888899999999999998 5899999999999999999
Q ss_pred HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e
Q 015890 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F 207 (398)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~ 207 (398)
.+...|++++.+ +.++.++.+|++.+++.+++++ ++|+++ |++|...+ +++|.++|+++|+++|+|++| +
T Consensus 74 ~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 74 AILLLGATPVFV-DIDPDTYNIDPELIEAAITPRT--KAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHcCCeEEEE-ecCCCcCCcCHHHHHHhcCcCC--eEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999 8776567889999999997654 888876 46899888 888999999999999999999 4
Q ss_pred ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC---------------CCCcchHH
Q 015890 208 MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------PICASIIS 270 (398)
Q Consensus 208 ~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~ 270 (398)
+........... .++.+.|++ |.++ +...|+++.++ +++.+.+....... ...++...
T Consensus 145 g~~~~~~~~~~~-~d~~~~S~~~~K~~~--~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T cd00616 145 GATYKGRKVGTF-GDAGAFSFHPTKNLT--TGEGGAVVTND--EELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQ 219 (352)
T ss_pred CCeECCEEcccC-cceeEEcCCCCCCCc--ccCceEEEECC--HHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHH
Confidence 432111111111 135566665 9884 33468888775 56766665433211 11122222
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc-----cEEEEeeCCCC-CCChHHHHHHHHHhcCe
Q 015890 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG-----AIYLWARLPEK-HLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~ll~~~gi 344 (398)
.+.+...+ ..+++..++.+++.+++.+.|+.++++++..+.. ...+.+.++.. ..+..++.+.| +++||
T Consensus 220 aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gI 294 (352)
T cd00616 220 AAIGLAQL----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEAL-KEAGI 294 (352)
T ss_pred HHHHHHHH----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHH-HHCCC
Confidence 22222222 2356666777888999999999876656654321 23444555431 23577788877 58899
Q ss_pred EEecCCCCC----------------C-------CCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 345 VVIPGGACG----------------C-------RGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 345 ~v~~g~~~~----------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
.+....... . .+.+|++++. .+++|++.++++|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 295 ETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 775332210 0 1579999998 89999999988763
No 242
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=8.5e-23 Score=189.79 Aligned_cols=281 Identities=20% Similarity=0.167 Sum_probs=195.6
Q ss_pred HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCCCCC
Q 015890 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH 149 (398)
Q Consensus 74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~ 149 (398)
++.+.+.+.++++. ++++++++++.++..++. ++++||+|+++.+.|.+... .++..|++++.+ +..
T Consensus 49 ~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d~~----- 119 (378)
T TIGR01329 49 RTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHV-DTT----- 119 (378)
T ss_pred HHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEe-CCC-----
Confidence 45555555555565 566777777889988776 77999999999999987654 345689999888 542
Q ss_pred CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc
Q 015890 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF 228 (398)
Q Consensus 150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~ 228 (398)
|++.+++++++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|+++ .+....+. ..+.+++++|+
T Consensus 120 -d~~~le~~i~~~t--klv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~~~~l---~~g~Di~v~S~ 190 (378)
T TIGR01329 120 -DLDKVKAALGPKT--KLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLLCNPL---ELGADIVYHSA 190 (378)
T ss_pred -CHHHHHHhcCcCc--eEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCcEEEEec
Confidence 7899999998665 99999999999999999 999999999999999999998 33322222 12345889999
Q ss_pred ccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 229 SKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 229 sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
+|.++. ++...|++++++ +.+.+++.........+.++...+.+...++ .+..+.++..++...+.+.|++++
T Consensus 191 tK~l~G~~~~~~G~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~----tl~~R~e~~~~na~~la~~L~~~~ 264 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKG--EEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK----TLAIRIEKQQENARAIAMFLSTHP 264 (378)
T ss_pred ceeccCCccceeEEEEeCc--HHHHHHHHHHHHhcCCcCCHHHHHHHHccCC----CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 998863 346789998864 5666777666543344455554433333333 356667777777777777777665
Q ss_pred CC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------------
Q 015890 308 EG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------------- 353 (398)
Q Consensus 308 ~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------- 353 (398)
.+ ++..| ..+..+.+.+ .......++++.| +..++.++-|....
T Consensus 265 ~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~ 342 (378)
T TIGR01329 265 RVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEV 342 (378)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHH
Confidence 42 11111 1133455566 2222255777766 56787777775421
Q ss_pred ------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 ------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 ------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.||+|++- |+.+.+++.|.+++.+
T Consensus 343 ~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 343 REERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred HHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 13589999997 6777888888888875
No 243
>PRK05968 hypothetical protein; Provisional
Probab=99.92 E-value=8.6e-23 Score=190.47 Aligned_cols=283 Identities=18% Similarity=0.105 Sum_probs=195.7
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~ 143 (398)
+...++++.++++. |.+ ..+++++++.|+..++.+++++||+|+++.+.|.+.. ..++..|++++.+ +.
T Consensus 63 p~~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~ 135 (389)
T PRK05968 63 PTVRAFEEMLAKLE----GAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYV-DG 135 (389)
T ss_pred hhHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEe-CC
Confidence 33456777777765 543 3455567779999999999999999999999997643 4566789998887 43
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
+ |++.+++.+ ++ +++|++++|+|+++.. .++++|+++|+++|+++|+|++| ......+. ..+.+
T Consensus 136 ~------d~~~l~~~i-~~--tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~---~~g~D 200 (389)
T PRK05968 136 R------DEEAVAKAL-PG--AKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQRPI---TLGVD 200 (389)
T ss_pred C------CHHHHHHhc-cc--CCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccCch---hcCCc
Confidence 2 788999888 33 4899999777766555 44999999999999999999999 33211111 12335
Q ss_pred EEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 223 i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
+++.|++|.++.+| .+.|+++.+ +++++++..... .....+++...+.+...|+. +..+.++..++..++.
T Consensus 201 ivv~S~tK~l~g~~~~~gG~i~~~---~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----l~~r~~~~~~~a~~la 273 (389)
T PRK05968 201 LVIHSASKYLGGHSDTVAGVVAGS---KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----LPLRMKAHEASALEIA 273 (389)
T ss_pred EEEeeccccccCCCCeEEEEEEEC---HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----HHHHHHHHHHHHHHHH
Confidence 88889999997544 578988877 677777765432 23345666666666555554 5667777777888899
Q ss_pred HHhccCCCCcccc-C-----------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------------
Q 015890 301 EALSPLGEGAVKG-G-----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------------- 353 (398)
Q Consensus 301 ~~l~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------- 353 (398)
+.|+.++.++.+. | ..+..+.+.+... .+..++++.| +..++.+.-|..+.
T Consensus 274 ~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~ 351 (389)
T PRK05968 274 RRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQP 351 (389)
T ss_pred HHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCH
Confidence 9998887653332 2 1133555666532 2456677665 45566655554332
Q ss_pred --------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 354 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 354 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++.||+|++. |+.+.+++.|.+++.+.
T Consensus 352 ~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 352 NSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence 14689999997 56677778888888754
No 244
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=4.1e-23 Score=190.39 Aligned_cols=285 Identities=18% Similarity=0.206 Sum_probs=194.7
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCC
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS 144 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~ 144 (398)
+.+...+++++++++. + .+++++++|+++|+.+++. ++++||+|+++.+.|.+....+...-.+ .+.+
T Consensus 52 ~~p~~~~le~~lA~le----g--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~---- 120 (364)
T PRK07269 52 KNPTRAKLEETLAAIE----S--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF---- 120 (364)
T ss_pred CCccHHHHHHHHHHHh----C--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----
Confidence 4566778888888886 3 5689999999999999984 6689999999999997655433222110 0111
Q ss_pred CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i 223 (398)
.+..|++.+++.+++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .++...+ ...+.++
T Consensus 121 --~~~~d~~~l~~~i~~~T--klV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~~p---l~~gaDi 190 (364)
T PRK07269 121 --TYANTEEELIAAIEEDT--DIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQRP---IELGADI 190 (364)
T ss_pred --EecCCHHHHHHhcCcCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhCCcE
Confidence 12348899999998776 99999999999999998 999999999999999999998 3332222 2233458
Q ss_pred EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
++.|++|.++..| .-.|++++++ +++.+++...+.....+.++...+.+...|+. +..+.++.++++..+.+.
T Consensus 191 vv~S~tK~l~g~~d~~gG~v~~~~--~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t----L~~r~~~~~~na~~~a~~ 264 (364)
T PRK07269 191 VLHSATKYLSGHNDVLAGVVVTND--LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRMERSTANAQEVVAF 264 (364)
T ss_pred EEecCceeccCCCcccceEEEeCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHH
Confidence 8999999996323 2358888765 67777776655444556677777776666664 677778888899999999
Q ss_pred hccCCCC-ccc-cCCccEEEEeeCCCCCCChHHHHHHH---------HHhcCeEEecCCCCC-------------CCCeE
Q 015890 303 LSPLGEG-AVK-GGEGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------CRGHL 358 (398)
Q Consensus 303 l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~-------------~~~~i 358 (398)
|+.++.+ ++. ++.++. +.+.+.. ......+++.+ .....+.+.|.+.++ .++.|
T Consensus 265 L~~~p~v~~v~ypg~gg~-~sf~~~~-~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~li 342 (364)
T PRK07269 265 LKKSPAVKEVLYTGKGGM-ISFKVAD-ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLL 342 (364)
T ss_pred HHhCCCccEEeCCCcCcE-EEEEECC-HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeE
Confidence 9988753 444 444444 4444431 11112222221 112233444433221 14689
Q ss_pred EEEecCCCHHHHHHHHHHHHHHHH
Q 015890 359 RISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 359 Ri~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
|+|++- |+.+.+++.|.+++.
T Consensus 343 RlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 343 RLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred EEEecc---CCHHHHHHHHHHHhc
Confidence 999997 667777788887763
No 245
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.92 E-value=5.6e-23 Score=183.99 Aligned_cols=343 Identities=16% Similarity=0.148 Sum_probs=217.4
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
..+.+++.|+.+... +.++.|++++..++... +...|+. ..+.++.|+.+++++ +.++.+|+||+|+|+
T Consensus 39 ~~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATE 113 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATE 113 (428)
T ss_pred cCCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchH
Confidence 345678888888644 34899999998887642 2111222 223566677777766 888888999999999
Q ss_pred HHHHHHHHhcc-CCC----EEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 101 AFVNIVLTLCD-AGD----SVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 101 a~~~~~~~l~~-~gd----~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++++++.+.. .+| .|++....|+.... .++..|++++++ |++.+ ...|++.+++.+++++ ++|.|.+
T Consensus 114 s~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l-pv~~~-~~~d~~~~~~~i~~~T--~lv~I~~ 189 (428)
T KOG1549|consen 114 SNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL-PVEDS-GLVDISKLREAIRSKT--RLVSIMH 189 (428)
T ss_pred HHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe-ccCcc-ccccHHHHHHhcCCCc--eEEEEEe
Confidence 99999999752 344 88888888877554 556778999999 88844 4689999999999976 9999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
.+|.+|+++| +++|.++|+++|+.+++|.+| .+....... .-+.+++..|.||++|++| +|+++++.+.+.+
T Consensus 190 Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQavG~i~vDV~--eln~D~~s~s~HK~ygp~~--iGaLYvr~~~~~~ 262 (428)
T KOG1549|consen 190 VNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAVGKIPVDVQ--ELNADFLSISAHKIYGPPG--IGALYVRRKRPRL 262 (428)
T ss_pred cccCcccccc---HHHHHHHhCcCCcEEEeehhhhcCCccccHH--HcCchheeeecccccCCCc--ceEEEEccCCCcc
Confidence 9999999999 999999999999999999999 665333222 2344588889999999998 8999888411222
Q ss_pred HH--HH---HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc---cEEEEe
Q 015890 252 AT--QL---LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWA 322 (398)
Q Consensus 252 ~~--~l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~---~~~~~~ 322 (398)
.. .+ ...+.....+...+.+..+-.+.+.....+.-....+.+....+...+.. .+.....++.- ...+-+
T Consensus 263 ~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~ 342 (428)
T KOG1549|consen 263 RVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSL 342 (428)
T ss_pred cccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceee
Confidence 10 01 11222334566666666666666541111111112222344444444332 22222222110 111222
Q ss_pred eCC--CCCCChHHHHHHHHHhcCeEEecCC-------------CCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 323 RLP--EKHLDDFEVVRWLAHRHGVVVIPGG-------------ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 323 ~~~--~~~~~~~~~~~~ll~~~gi~v~~g~-------------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.++ .+..-..+... +...-|..+.... .+....+|||+++. ++++|++.+++.+.+.+..+..
T Consensus 343 ~~~~~~g~~~~~~~~~-~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 343 SFPYVEGESLLMDLKD-VALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred ecccccCcchhhhhhh-hhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 222 11100001111 1111222221111 00124689999999 8999999999999988877654
No 246
>PRK06541 hypothetical protein; Provisional
Probab=99.92 E-value=4.1e-22 Score=189.09 Aligned_cols=346 Identities=17% Similarity=0.127 Sum_probs=220.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+.. .+.......+....+++.+.+..+.+.+.+++++++++|++
T Consensus 49 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve 126 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA--FFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCc--CccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHH
Confidence 4689999998764 3343 58999999999987632 11111122344555666665544333468999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CC---CCCC-------
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KT---LHPD------- 151 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~---~~~d------- 151 (398)
.+++.... ...+|+....+|++....+-.. |. .+..+ |.+. .. +.-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 205 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRV-PNTNFYRAPELGDDPEAFGRW 205 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEe-CCCccccccccCCCHHHHHHH
Confidence 99987542 1368999999999876433222 11 11122 1111 00 1112
Q ss_pred -hHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 152 -ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 152 -~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
++.+++.++. ...+++|+++..+++.|.+. |++.+++|.++|++||+++|+||++ |+..|........+....+
T Consensus 206 ~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDi 285 (460)
T PRK06541 206 AADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDI 285 (460)
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCE
Confidence 3667777752 23356777776689999875 5889999999999999999999999 6554433222111111112
Q ss_pred cccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 226 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
.+++|.++ +|+ ++|+++++ +++++.+... ....+++.++.+.+++.+.|+...+ ++..++.+++.+++.
T Consensus 286 vt~gK~l~-~G~~pigav~~~---~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~--~~~~~~~~~~g~~l~ 359 (460)
T PRK06541 286 ITCAKGIT-SGYSPLGAMIAS---DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER--EGLLDHVRDNEPAFR 359 (460)
T ss_pred EEeccccc-CCccceeEEEEc---HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHH
Confidence 36899998 887 99999999 7887776532 1234667788888888888875211 123345555555555
Q ss_pred HHhccC---CCCccccCCccEEEEeeCCCCC------CCh-------HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890 301 EALSPL---GEGAVKGGEGAIYLWARLPEKH------LDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364 (398)
Q Consensus 301 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 364 (398)
+.|+++ +.+....+. |.++.+.+.+.. ... ..+...++ ++||++.+.. ...+.+|+++..
T Consensus 360 ~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~--~g~~~lrl~Ppl 435 (460)
T PRK06541 360 ATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRADD--RGDPVVQLAPPL 435 (460)
T ss_pred HHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEecC--CCCCEEEEECCC
Confidence 555443 332334455 666666663211 000 13445554 8999998731 124679999886
Q ss_pred -CCHHHHHHHHHHHHHHHHHHh
Q 015890 365 -LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+++++++++++|.++++++-
T Consensus 436 ~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 436 ISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999998753
No 247
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=4.1e-22 Score=183.96 Aligned_cols=294 Identities=16% Similarity=0.128 Sum_probs=199.6
Q ss_pred CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEE
Q 015890 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHIL 139 (398)
Q Consensus 64 y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~ 139 (398)
|..+....+.++.+.+.+....+. .. .++++++++|+..++.+++++||+|+++.|.|+++.. .++.+|+++..
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~~-~~-~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~ 133 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEGS-AG-TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY 133 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhCC-CC-EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence 333344566677777777665542 33 4556668899999999999999999999999988764 45788999888
Q ss_pred eccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcccccc
Q 015890 140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVE 218 (398)
Q Consensus 140 ~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~ 218 (398)
+ +.. +.+.+++++++++ ++|++++|+||++.+.+ +++|+++|+++|+++|+|++| .+.. ..+..
T Consensus 134 v-d~~------~~e~l~~al~~~T--klV~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~---~~pl~ 198 (395)
T PRK05967 134 Y-DPE------IGAGIAKLMRPNT--KVVHTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLY---FRPLD 198 (395)
T ss_pred e-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCcee---cChhH
Confidence 7 432 3577999998776 99999999999887666 999999999999999999999 3211 11222
Q ss_pred CCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 219 GDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 219 ~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
.+.++++.|++|.++- ++.-.|+++.+ ++..+++.........+.++...+.+...++. +.-+.+++.+++.
T Consensus 199 ~GaDivv~S~tKy~~Gh~d~~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----l~lR~~~~~~na~ 271 (395)
T PRK05967 199 FGVDISIHAATKYPSGHSDILLGTVSAN---EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLEHHRKSAL 271 (395)
T ss_pred cCCCEEEEecccccCCCCCeeEEEEEcC---HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----HHHHHHHHHHHHH
Confidence 3456899999999852 34667877766 56666665555444556677766555555544 6777788888888
Q ss_pred HHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890 298 IIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----- 352 (398)
Q Consensus 298 ~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----- 352 (398)
.+.+.|++++.+ +|+.|. .+-.+.+.+.....+..+.+.+++++-.+.. .-|...
T Consensus 272 ~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~ 351 (395)
T PRK05967 272 EIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALH 351 (395)
T ss_pred HHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeee
Confidence 899999887754 233221 1334566665321012344444554444431 111100
Q ss_pred -----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 353 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 353 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+ .++.||||++- |+.+.+++.|.++++..
T Consensus 352 ~~~~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 352 VKLGDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCCChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 12479999997 67778888888888754
No 248
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=5.9e-22 Score=184.96 Aligned_cols=281 Identities=20% Similarity=0.189 Sum_probs=191.3
Q ss_pred CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~ 144 (398)
...++++.++++. |.+ ..++ +++|+.++..++. ++++||+|+++.+.|++.. ..++..|++++.+ +.+
T Consensus 55 ~~~~le~~lA~l~----g~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~ 126 (390)
T PRK08064 55 TREALEDIIAELE----GGT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV-DMT 126 (390)
T ss_pred hHHHHHHHHHHHh----CCC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEE-CCC
Confidence 3455666666654 554 3455 4556688888886 7789999999999997543 4456689999888 542
Q ss_pred CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i 223 (398)
|++.+++.+++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++| ......+. ..+.++
T Consensus 127 ------d~~~l~~~l~~~t--klV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~~~---~~g~Di 192 (390)
T PRK08064 127 ------NLEEVAQNIKPNT--KLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQKPL---DLGADV 192 (390)
T ss_pred ------CHHHHHHhcCCCc--eEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccCch---hhCCcE
Confidence 6889999998765 99999999999999998 899999999999999999999 33221111 224568
Q ss_pred EEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 224 NLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 224 ~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
++.|++|.++ .+|...|++++++ +++++.+......+....++...+.+... ...+..+.++..+++..+.+.
T Consensus 193 vv~S~tK~~~G~~~~laG~~v~~~--~~~~~~l~~~~~~~g~~~~~~~a~l~~~g----l~tl~~R~~~~~~~a~~la~~ 266 (390)
T PRK08064 193 VLHSATKFLAGHSDVLAGLAVVKD--EELAQKLYFLQNSFGAVLGVQDCWLVLRG----LKTLHVRLEHSSETANKIALY 266 (390)
T ss_pred EEeecceeccCCccceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcc----cCcHHHHHHHHHHHHHHHHHH
Confidence 8999999985 3445678877764 67888888777644444444444432222 233667777788888888888
Q ss_pred hccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCe---EEecCC------------
Q 015890 303 LSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGG------------ 350 (398)
Q Consensus 303 l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~~g~------------ 350 (398)
|++++.+ +++.| ..+..+.+.+. + .+-...++++.++ .++-|.
T Consensus 267 L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~----~-~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~ 341 (390)
T PRK08064 267 LQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ----S-EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMS 341 (390)
T ss_pred HhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC----C-HHHHHHHHHhCCcceEcccCCCCcceeECCcccc
Confidence 8876642 22211 11334555553 1 2334456667777 444441
Q ss_pred CCC-----------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 351 ACG-----------CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 351 ~~~-----------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+. .++.||+|++- |+.+.+++.|.++++++.
T Consensus 342 h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 342 HAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYVE 384 (390)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhcc
Confidence 111 14689999997 566777788888887754
No 249
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=1.6e-22 Score=187.24 Aligned_cols=282 Identities=16% Similarity=0.100 Sum_probs=193.8
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS 145 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~ 145 (398)
...+++.++++. + .+++++++|+++|+..++.+++++||+|+++++.|++.... ++..|+++..+ +..
T Consensus 52 ~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~-d~~- 123 (377)
T TIGR01324 52 HFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY-DPL- 123 (377)
T ss_pred HHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE-CCC-
Confidence 357777777765 4 35789999999999999999999999999999999876543 45678887766 321
Q ss_pred CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
+.+.+++.+++++ ++|++++|+||+|...+ +++|+++|+++|+++|+|++| .+.... ....+.+++
T Consensus 124 -----~~e~l~~~i~~~t--klV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~~---pl~~gaDiv 190 (377)
T TIGR01324 124 -----IGEDIATLIQPNT--KVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLFK---PLEHGVDIS 190 (377)
T ss_pred -----CHHHHHHhcCCCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccC---ccccCceEE
Confidence 2378999988765 99999999999998877 999999999999999999999 544322 223456689
Q ss_pred EcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 225 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 225 ~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+.|++|.++. ++...|+++.+ ++.++.+.........+.++...+.+...++. +.-+.++..+++..+.+.|
T Consensus 191 v~S~tK~l~G~~d~~gG~v~~~---~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t----l~~R~~~~~~~a~~la~~L 263 (377)
T TIGR01324 191 IQAGTKYLVGHSDIMIGTVVAN---ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT----LGVRLKQHQESSLAIAKWL 263 (377)
T ss_pred EecCceeccCCCCceEEEEEeC---HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHHH
Confidence 9999999963 34678888887 66666666444434455566555555544443 5566777788888888888
Q ss_pred ccCCCC-ccccC----------------CccEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCC-------------
Q 015890 304 SPLGEG-AVKGG----------------EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGAC------------- 352 (398)
Q Consensus 304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~------------- 352 (398)
++.+.+ +++.| ..+..+.+++.. .......+++.| +-.++.+.-|...
T Consensus 264 ~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~~~~~~~~~ 342 (377)
T TIGR01324 264 SEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHL-QLFGLGYSWGGYESLALCNQPELGHR 342 (377)
T ss_pred HhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEeccCCCccceeecCCCCCCHH
Confidence 877653 23322 113345556642 111233444433 2333333222210
Q ss_pred ------CCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 ------GCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 ------~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
-.++.||+|++- |+.+.+++.|.++++.
T Consensus 343 ~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 343 PNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 012579999997 6677788888888764
No 250
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=4e-22 Score=187.39 Aligned_cols=286 Identities=19% Similarity=0.236 Sum_probs=193.4
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 142 (398)
.+....+++.++++. | .+..++++|+++|+..++.+++++||+|+++.+.|++.. ..++..|++++.+ +
T Consensus 63 ~p~~~~Le~~lA~le----g--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v-d 135 (431)
T PRK08248 63 NPTTDVFEKRIAALE----G--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV-D 135 (431)
T ss_pred CchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE-C
Confidence 334455666666654 5 356788999999999999999999999999999997633 4456789999988 5
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
. .|++.+++.+++++ ++|++++|+||||.+++ +++|+++|+++|+++|+|+++ .+....+ ...+.
T Consensus 136 ~------~d~e~l~~ai~~~t--klV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~~~~p---l~~ga 201 (431)
T PRK08248 136 P------SDPENFEAAITDKT--KALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPYLLRP---IEHGA 201 (431)
T ss_pred C------CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccccCCh---hHcCC
Confidence 4 27899999998765 99999999999999999 889999999999999999998 3332221 23456
Q ss_pred EEEEcccccccCCCcceeEEEEccCCcHHH-------------------------------HHHHHHhhccCCCCcchHH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-------------------------------ATQLLKVQDNIPICASIIS 270 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~~~~ 270 (398)
++++.|++|.+|.+|.++|.+++.+....+ .+.............++..
T Consensus 202 Divv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~ 281 (431)
T PRK08248 202 DIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFN 281 (431)
T ss_pred CEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence 688999999999899888886664210000 0111112222334555555
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChH
Q 015890 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF 332 (398)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~ 332 (398)
.+.+...|+. +..+.++..+++..+.+.|++++.++ +..| . .|-.+.+.+... .
T Consensus 282 a~l~~rgl~t----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~----~ 353 (431)
T PRK08248 282 SFLLLQGLET----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGG----V 353 (431)
T ss_pred HHHHhcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----H
Confidence 5554444443 66777888889999999999887633 2221 1 133455566421 2
Q ss_pred HHHHHHHHhcCeEEec---CCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIP---GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~---g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+...++.++-.+.... |... + .++.||+|++- |+.+.+++.|.+++.+.
T Consensus 354 ~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 354 EAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT---EAIDDILDDLRQAIRQS 428 (431)
T ss_pred HHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 3333344443433311 1110 0 13579999997 67778888888888754
No 251
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.6e-21 Score=171.24 Aligned_cols=358 Identities=19% Similarity=0.177 Sum_probs=258.8
Q ss_pred hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
+...+...+..+.+.....++.|+|--..|. .++.|++++-..+.+. .---|+-....+++++...+..+++
T Consensus 7 l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 7 LADYDPEIFEAIQQELERQREHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred HHhcCHHHHHHHHHHHHHHhhceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 3345666777777777777889999877766 4799999988777542 1223444566678888888889999
Q ss_pred cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcC--cEEEEeccCCCCCCCCChHHHHHhh
Q 015890 85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTG--VTHILVGPCSSKTLHPDADWLEKTL 159 (398)
Q Consensus 85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~e~l~~~l 159 (398)
++.+--||-..+|+ .|+.+++.++++|||+|+-.+-.+.++...- ...| .+.+.+ +++.++..+|.|++++..
T Consensus 85 Fga~~anVQPhSGs-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y-~vd~et~~IDyD~~~k~a 162 (413)
T COG0112 85 FGAEYANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY-GVDPETGLIDYDEVEKLA 162 (413)
T ss_pred hCCCccccCCCCch-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEec-ccccccCccCHHHHHHHH
Confidence 99988888877776 9999999999999999998777776554322 2223 477788 888887889999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
.+.+ ||+|+...... -..+| ++++.++|++.|.+|++|.+| +...|.-+.+..+ ..++++|.||+| +|
T Consensus 163 ~e~k-PK~ii~G~SaY--~r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTl--rG 233 (413)
T COG0112 163 KEVK-PKLIIAGGSAY--SRPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTL--RG 233 (413)
T ss_pred HHhC-CCEEEECcccc--ccccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCC--CC
Confidence 8665 79998763333 34566 899999999999999999999 4445554455444 558899999998 68
Q ss_pred ceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
.|.|.|.+++ +++.+++++.. .....++....+++.+-++.+ .+..++++.+++-++++.|.+.|.+.|...+.+.
T Consensus 234 PrGG~Il~~~--eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGg 311 (413)
T COG0112 234 PRGGIILTND--EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGG 311 (413)
T ss_pred CCceEEEecc--HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCC
Confidence 8999999996 68889887743 333333333333333334433 3455789999999999999999999887444455
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-CC-----CCCeEEEEecC-----CCHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-CG-----CRGHLRISFGG-----LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~-----~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~ 383 (398)
.....+.+++.....+.. .++.+|.+.||.+.--.. +. .+..|||+... ..++|+++..+.|.+++..
T Consensus 312 TdnHl~lVDl~~~~~~Gk-~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 312 TDNHLVLVDLRSKGLTGK-KAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred ccceEEEEEcccCCCCHH-HHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 556677788874333444 445566799999854432 22 25689998433 4678899988888888876
Q ss_pred H
Q 015890 384 L 384 (398)
Q Consensus 384 ~ 384 (398)
.
T Consensus 391 ~ 391 (413)
T COG0112 391 L 391 (413)
T ss_pred c
Confidence 3
No 252
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.92 E-value=4.6e-22 Score=179.12 Aligned_cols=339 Identities=17% Similarity=0.142 Sum_probs=230.6
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.||||..+..+.. .+|.|.+|+.+++.++. .|+.+ .++.-.+++.+.++.+. .+.|-+++++|+|..
T Consensus 50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtm 123 (432)
T COG0001 50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVPS-IEKVRFVNSGTEATM 123 (432)
T ss_pred CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcCc-ccEEEEecchhHHHH
Confidence 46899999998875553 68899999999999864 45432 34555666766665442 378999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cC--cEEEE------eccCC--CC----CCCCChHHHHHhhccC-CCC
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG--VTHIL------VGPCS--SK----TLHPDADWLEKTLETK-PTP 165 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g--~~~~~------~~~~~--~~----~~~~d~e~l~~~l~~~-~~~ 165 (398)
.+++... ...|+|+..+.||+++.+.+.. .| ..... + |.+ .+ .+ -|++.+++++++. .++
T Consensus 124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv-p~~~a~~ti~~~y-ND~~al~~~~~~~g~~I 201 (432)
T COG0001 124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV-PADVAKHTLVLPY-NDLEALEEAFEEYGDDI 201 (432)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCC-ChhhhccEEEecC-CCHHHHHHHHHHcCCcE
Confidence 9998864 3448999999999997764432 22 11000 1 000 00 01 1899999999854 458
Q ss_pred eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--ecc--CCCccccccCCcEEEEcccccccCCCcceeE
Q 015890 166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 166 ~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
++|+++......|.+ ..++.++.|.++|+++|++||.||+. |.. .|... .++....+.+++|.+| +|+++|
T Consensus 202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~---~~gi~PDlttlGKiIG-GGlP~g 277 (432)
T COG0001 202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG---YYGVEPDLTTLGKIIG-GGLPIG 277 (432)
T ss_pred EEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc---ccCcCcchhhhhhhhc-CCccee
Confidence 889998655556775 55667999999999999999999999 332 23211 1223344779999998 999999
Q ss_pred EEEccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 241 YIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
.+.++ +++++.+... .+..+++.|+.+++|..+.|+... ..+++..+.-.++++-+.+.+.+.+.......
T Consensus 278 a~gGr---~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~ 354 (432)
T COG0001 278 AFGGR---AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNR 354 (432)
T ss_pred eeccH---HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Confidence 99999 7888876543 345667889999999999988622 23555555666666667777777665333333
Q ss_pred CccEEEEeeCCCCCC--------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHL--------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~--------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++++.+.-.+.... + -..+...++ ++||++.|+. -...-+|..+ +++++++.++++.+++++
T Consensus 355 ~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~----~ea~flS~ah-te~di~~~~~a~~~~~~~ 428 (432)
T COG0001 355 VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQ----FEAGFLSTAH-TEEDIDRTLEAADEAFKE 428 (432)
T ss_pred ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCcc----ccceeeeccc-CHHHHHHHHHHHHHHHHH
Confidence 334433222221110 1 123455565 8999999863 1334466664 899999999999999988
Q ss_pred Hhc
Q 015890 384 LVK 386 (398)
Q Consensus 384 ~~~ 386 (398)
+..
T Consensus 429 ~~~ 431 (432)
T COG0001 429 LAG 431 (432)
T ss_pred hhc
Confidence 754
No 253
>PRK07678 aminotransferase; Validated
Probab=99.92 E-value=8.9e-22 Score=186.72 Aligned_cols=347 Identities=14% Similarity=0.097 Sum_probs=224.7
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +... ...+....+++.+.+..+. .+.+++++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e 119 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY--FPLT-QSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANE 119 (451)
T ss_pred CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc--cccc-cCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHH
Confidence 4689999998764 3333 589999999999876321 1111 1233445566666555443 347999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcC-c------------EEEEeccCCC-CCCC-------CC---
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG-V------------THILVGPCSS-KTLH-------PD--- 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g-~------------~~~~~~~~~~-~~~~-------~d--- 151 (398)
.+++.... +| .+|+....+|+++...+-... . .+..+ +.+. .... .+
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHV-PPPDCYRMPGIESEDIYDLEC 198 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEe-CCCccccccccCChHHHHHHH
Confidence 99997642 23 579999999999765443221 1 11112 1110 0000 01
Q ss_pred hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.++ ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|........+....+-
T Consensus 199 ~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv 278 (451)
T PRK07678 199 VKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII 278 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE
Confidence 233566664 22347899999777667775 67789999999999999999999999 66666432222222222244
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE 297 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 297 (398)
+++|.+| .| +++|.++++ +++.+.+.. .....+++.|+.+.+++.+.|+.. ++.+++..+.-...++
T Consensus 279 t~gK~lg-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 354 (451)
T PRK07678 279 TMAKGIT-SAYLPLSATAVK---KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLE 354 (451)
T ss_pred Eeecccc-cCCcceeEEEEc---HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 7799998 66 699999999 788877753 124567888999999999998752 2334444444455566
Q ss_pred HHHHHhccCCCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCC--CCCCeEEEEecC-CC
Q 015890 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--GCRGHLRISFGG-LV 366 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~--~~~~~iRi~~~~-~~ 366 (398)
.|.+.+++++.+.-+... |.++.+.+.+.. .....++..++ ++||++.+.... ...+.+|+++.. .+
T Consensus 355 ~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it 432 (451)
T PRK07678 355 QLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKNGDTVAGYNNVLTLSPPLVIS 432 (451)
T ss_pred HHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeecCccccCCCCEEEEECCCcCC
Confidence 666666666654434455 555555553211 01234556554 899999764221 224679999887 79
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 015890 367 EDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~ 384 (398)
++|++++++++.++++++
T Consensus 433 ~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 433 SEEIAFIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 254
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.92 E-value=8.5e-22 Score=184.37 Aligned_cols=330 Identities=14% Similarity=0.064 Sum_probs=228.2
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-C-CcEEE--ecChHHHHHHHHHHhcc-------
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSVMV--TAGANQAFVNIVLTLCD------- 111 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~-~~v~~--~~g~t~a~~~~~~~l~~------- 111 (398)
++.|++.+.+...+.... ..+...+...++.+.+.+++.+.+|.+ + +++.+ |+|+|+|++.++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 457888888888876432 223234445688999999999988987 3 45554 79999999998876531
Q ss_pred -CC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890 112 -AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 112 -~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
.| ..|+++.-.|.++...++..|+++..+ +++++++.+|++.|++++++++ .+|+++.++|.||.+.|
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i-~~d~~~~~vd~~~L~~~i~~~t--~lV~~t~g~t~tG~idp--- 204 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREV-PMDPGRYVIDPEQVVEAVDENT--IGVVCILGTTYTGEYED--- 204 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEE-ecCCCceeeCHHHHHHHHhhCC--eEEEEEeCCCCCcccCC---
Confidence 11 368999999999999999999999999 8877656899999999998775 89999999999999999
Q ss_pred HHHHHHHHHHc------CCEEEEeece----ecc--CCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHH-H
Q 015890 186 LKRISDLCKAA------GSWLVVDNTY----FMY--DGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEG-F 251 (398)
Q Consensus 186 l~~i~~l~~~~------~~~livDe~~----~~~--~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~-~ 251 (398)
+++|+++|+++ |+++++|.+| .++ ...+........+-+..|.||++ ++. .+|+++.++ ++ +
T Consensus 205 i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~--g~G~l~~r~--~~~l 280 (431)
T TIGR01788 205 VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYP--GVGWVIWRD--EEAL 280 (431)
T ss_pred HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCC--CcEEEEEeC--hHHc
Confidence 99999999999 9999999999 112 11111111223345778999987 544 478888775 32 2
Q ss_pred HHHHHH---hhc------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEE
Q 015890 252 ATQLLK---VQD------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYL 320 (398)
Q Consensus 252 ~~~l~~---~~~------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~ 320 (398)
...+.. +.. ...++.+..........|.. +...+++..++..++.+++.+.|++.+.++++.+ +....+
T Consensus 281 ~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV 360 (431)
T TIGR01788 281 PEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLV 360 (431)
T ss_pred chhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEE
Confidence 222211 000 00111111121222222222 4466788889999999999999999887677764 335666
Q ss_pred EeeCCCC---CCChHHHHHHHHHhcCeEEecCCC---CCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 321 WARLPEK---HLDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 321 ~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++... ..+..++.+.| .++|+.+..... ....-.+|+++.. .+.+.++++++.|.+++..+
T Consensus 361 ~Fr~~~~~~~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 361 AFKLKDDADPGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEeCCCCCCCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 6676531 13456777766 578987633322 1123468999875 67889999999999888654
No 255
>PRK06062 hypothetical protein; Provisional
Probab=99.92 E-value=6.8e-22 Score=187.32 Aligned_cols=344 Identities=14% Similarity=0.107 Sum_probs=223.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +.. ....+.+..+++.+.+..+...+.+.+++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve 126 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAPGDLSKVFFTNGGADANE 126 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHH
Confidence 4689999998764 3333 589999999999876321 111 222445566666666554433468999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-----------EEEEeccCCC-CC--CC--CC-------hHHHHH
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-----------THILVGPCSS-KT--LH--PD-------ADWLEK 157 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-----------~~~~~~~~~~-~~--~~--~d-------~e~l~~ 157 (398)
.+++... ....+|+....+|+++...+-.. +. .+..+ +.+. .. +. -| ++.+++
T Consensus 127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~le~ 205 (451)
T PRK06062 127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF-FGPFLYRSEFHATTEEEECERALAHLER 205 (451)
T ss_pred HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe-CCCCccccccCCCChHHHHHHHHHHHHH
Confidence 9999764 22368999999999976544322 11 01111 1110 00 10 12 567788
Q ss_pred hhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890 158 TLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 158 ~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~ 232 (398)
.++. ...+++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|........+....+.+++|.+
T Consensus 206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~l 285 (451)
T PRK06062 206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGV 285 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhh
Confidence 7752 2347888888777777876 57889999999999999999999999 65555432222122222244789999
Q ss_pred CCCcc-eeEEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHH-HHHHHHHHHHhccC
Q 015890 233 GMMGW-RVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGP--EWVTERVKDL-VRNREIIREALSPL 306 (398)
Q Consensus 233 ~~~G~-r~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~-~~~~~~l~~~l~~~ 306 (398)
| .|+ ++|.++++ +++.+.+... ....+++.++.+.+++.+.|+... +..++..+.- ...++.|.+..++.
T Consensus 286 g-gG~~Pigav~~~---~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~ 361 (451)
T PRK06062 286 N-SGYVPLGGVAIS---EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERH 361 (451)
T ss_pred h-cCCcCcEEEEEc---HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7 674 89999999 7787776532 234577888999999999887521 2222222222 23445555554555
Q ss_pred CCCccccCCccEEEEeeCCCCCC-------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKHL-------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA 372 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~ 372 (398)
+.+..+... |.++.+.+.+... ....++..++ ++||++.+. .+.+|+++.. .+++++++
T Consensus 362 ~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~ 434 (451)
T PRK06062 362 PSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN-----GNRIHVVPPCTVTEDEVRE 434 (451)
T ss_pred CcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec-----CCEEEEECCccCCHHHHHH
Confidence 543344455 5555666532110 1235566554 899998652 3579998866 79999999
Q ss_pred HHHHHHHHHHHHh
Q 015890 373 AADRLRRGLEELV 385 (398)
Q Consensus 373 ~~~~l~~~~~~~~ 385 (398)
+++++.++++++.
T Consensus 435 ~~~~l~~~l~~~~ 447 (451)
T PRK06062 435 GLAILDAALAVAD 447 (451)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 256
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.91 E-value=3.2e-21 Score=179.91 Aligned_cols=307 Identities=18% Similarity=0.224 Sum_probs=202.3
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~ 123 (398)
.++-.+++.+.+.... .|+ ..++++.+.+++++.++. +++++++|+++|+..++.++ +++||+|+++.++|
T Consensus 10 ~~~~~~~~~~~l~~~~--~~g----~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~ 81 (375)
T PRK11706 10 VGTELDYIQQAMSSGK--LCG----DGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (375)
T ss_pred CHHHHHHHHHHHHcCC--ccC----CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence 3455777777765532 232 234566666666665564 68999999999999887766 68999999999999
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...+...|++++.+ +.+++++.+|++++++.+++++ ++|+++ |++|...+ +++|.++|+++|+++|+|
T Consensus 82 ~~~~~~~~~~G~~~v~~-d~d~~~~~~d~~~le~~i~~~t--k~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD 152 (375)
T PRK11706 82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIEAAITPKT--RAIVPV---HYAGVACE---MDTIMALAKKHNLFVVED 152 (375)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcCCCC--eEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEE
Confidence 99999999999999999 8888888899999999998754 888866 46898887 889999999999999999
Q ss_pred ece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015890 204 NTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------- 262 (398)
Q Consensus 204 e~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~---------------- 262 (398)
++| ++ +.+.+.... . .+.+.|++ |.++ +|.+.++++.+ +++.+++..++...
T Consensus 153 ~a~a~g~~~~~~~~g~~-~--~~~~~Sf~~~K~l~-~g~gG~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (375)
T PRK11706 153 AAQGVMSTYKGRALGTI-G--HIGCFSFHETKNYT-AGEGGALLIND---PALIERAEIIREKGTNRSQFFRGQVDKYTW 225 (375)
T ss_pred CccccccccCCeeeecC-c--CEEEEeCCCCcccc-ccCCeEEEECC---HHHHHHHHHHHHcCCCcchhhccCCCccee
Confidence 999 43 344322211 1 24445654 9996 57766677655 77777666554210
Q ss_pred -CCCcc----hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CCccc-cCC----ccEEEEeeCCCCCC
Q 015890 263 -PICAS----IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK-GGE----GAIYLWARLPEKHL 329 (398)
Q Consensus 263 -~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~-~~~----~~~~~~~~~~~~~~ 329 (398)
..+.+ ....+.+...+ ..+++..++-+++.+++.+.|+.++ .+... .+. ...++++.++.. .
T Consensus 226 ~~~g~~~~~~~~~aa~~~~ql----~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 300 (375)
T PRK11706 226 VDIGSSYLPSELQAAYLWAQL----EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-E 300 (375)
T ss_pred eecccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-C
Confidence 01122 12222222222 2245555556666677777777654 22221 121 123455666543 3
Q ss_pred ChHHHHHHHHHhcCeEEecCCCC----------C-----C-------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGAC----------G-----C-------RGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~----------~-----~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+..++.+.| .++||.++..... . . ...+-+-+.. .+++|++..++.|++++
T Consensus 301 ~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 301 DRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 567777776 5889987533210 0 0 1235554554 67888888888888754
No 257
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=1.2e-21 Score=185.49 Aligned_cols=344 Identities=10% Similarity=0.033 Sum_probs=223.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.... .......+.+..+++.+.+..+...+.+++++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve 128 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVE 128 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHH
Confidence 4688999998773 3333 5899999999998763211 011112345556666666554433357999999999999
Q ss_pred HHHHHhc-------cC-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-CC--C--------CC
Q 015890 104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TL--H--------PD 151 (398)
Q Consensus 104 ~~~~~l~-------~~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~--~--------~d 151 (398)
.+++... .+ ..+|+....+|++....+-...- .+..+ +.+.. +. . -+
T Consensus 129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 207 (453)
T PRK06943 129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVV-ASPDARGARPGETAADVAARA 207 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEE-CCCCccccccCCCHHHHHHHH
Confidence 9999862 12 36899999999987633322110 11122 11111 10 0 12
Q ss_pred hHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.++ ....+++|+++. .+...|. ..|++.++++.++|++||+++|.||++ |+..|........+....+-
T Consensus 208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv 287 (453)
T PRK06943 208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL 287 (453)
T ss_pred HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE
Confidence 467777775 223478899986 3777787 468889999999999999999999999 66666433322222222244
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE 297 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 297 (398)
+++|.++ .| +++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+.. ++.+++..+.-...++
T Consensus 288 t~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~ 363 (453)
T PRK06943 288 CLSKGIS-GGYLPLSLVLSR---DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRA 363 (453)
T ss_pred eeehhhc-cCcccceEEEEc---HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 6789998 78 599999999 777776642 123456778999999999988752 2334444444444455
Q ss_pred HHHHHhccCCCCccccCCccEEEEeeCCCCCCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA 372 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~ 372 (398)
.|.+. .+.+.+.-+... |.++.+.+...... ...+...+ .++||++.+. .+.+|+++.. .+++++++
T Consensus 364 ~L~~l-~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~-~~~Gll~~~~-----g~~l~~~Ppl~it~~eid~ 435 (453)
T PRK06943 364 ALAPL-AAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAA-LERELLLRPI-----GTTVYLMPPYVLDDDEIAW 435 (453)
T ss_pred HHHHH-hcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCcCCHHHHHH
Confidence 55543 334443334455 66666666421111 23455655 4899999763 2469999665 79999999
Q ss_pred HHHHHHHHHHHHh
Q 015890 373 AADRLRRGLEELV 385 (398)
Q Consensus 373 ~~~~l~~~~~~~~ 385 (398)
++++|.++++++.
T Consensus 436 ~~~~l~~al~~~~ 448 (453)
T PRK06943 436 LAERTRATLDATL 448 (453)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998863
No 258
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=8.7e-22 Score=183.64 Aligned_cols=283 Identities=18% Similarity=0.197 Sum_probs=191.1
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (398)
+....+++.++++. +. +..+.++|+++|+.+++.+++++||+|+++.++|.+.... +...|+++.++ ..
T Consensus 61 Ptv~~lE~~la~le----g~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v-d~ 133 (432)
T PRK06702 61 PTLAAFEQKLAELE----GG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF-NP 133 (432)
T ss_pred cHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEE-CC
Confidence 44566666776665 32 4578899999999999999999999999999999866554 67889999888 32
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
.+|++.+++++++++ ++|++++|+||++.+.+ +++|+++|+++|+++|+|+++ .++-- .+...+.+
T Consensus 134 -----~~d~~~l~~~I~~~T--k~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~---~pl~~GAD 200 (432)
T PRK06702 134 -----NLTADEIVALANDKT--KLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLC---QAFEHGAN 200 (432)
T ss_pred -----CCCHHHHHHhCCcCC--eEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhC---ChhhcCCC
Confidence 358899999999876 99999999999999999 999999999999999999998 33211 11223445
Q ss_pred EEEccccccc-----CCCccee-----EEEEccCCcHHHH---------------------H-HHHHhhccCCCCcchHH
Q 015890 223 VNLFSFSKAY-----GMMGWRV-----GYIAYPSEVEGFA---------------------T-QLLKVQDNIPICASIIS 270 (398)
Q Consensus 223 i~~~s~sK~~-----~~~G~r~-----G~i~~~~~~~~~~---------------------~-~l~~~~~~~~~~~~~~~ 270 (398)
+++.|++|.+ +++|.++ +|...++ ++++ . ...........+++++.
T Consensus 201 Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~ 278 (432)
T PRK06702 201 IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKY--PELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFN 278 (432)
T ss_pred EEEEccccccCCCcceeceEEEeCCCcccccccc--cccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHH
Confidence 8999999944 4444444 3333221 1111 1 11112223456778888
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChH
Q 015890 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF 332 (398)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~ 332 (398)
.+.+...|+. +..+.++..+++..+.+.|++++.+. +..| . .+-.+.+.+... .
T Consensus 279 a~l~~rgL~T----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~----~ 350 (432)
T PRK06702 279 AYISNIGLET----LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGG----L 350 (432)
T ss_pred HHHHHhccCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----H
Confidence 8877777775 56666667788999999998877532 2221 1 133455666421 2
Q ss_pred HHHHHHHHhcCeEEe-------------cCCCC------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVI-------------PGGAC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~-------------~g~~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+...+++++-.+... |.+.- + .++.||+|++- |+.+.+++.|.+++..
T Consensus 351 ~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 351 EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---EDVSDIIADLEAALVG 424 (432)
T ss_pred HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence 223334433333221 11100 0 13589999997 6777788888888765
No 259
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.91 E-value=9.8e-22 Score=184.62 Aligned_cols=339 Identities=12% Similarity=0.071 Sum_probs=217.4
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+..... ......+....+++.+.+..+...+.+++++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve 117 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM--FGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVE 117 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc--ccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence 4689999998764 3332 47999999999987632111 11112345566667666555433468999999999999
Q ss_pred HHHHHhcc------C-CCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCCCC-----CCChHHHHH
Q 015890 104 NIVLTLCD------A-GDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLEK 157 (398)
Q Consensus 104 ~~~~~l~~------~-gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~e~l~~ 157 (398)
.+++.... . ..+|+....+|++....+-.. +. .++.+ +.+...+ .-|++++++
T Consensus 118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~d~~~l~~ 196 (428)
T PRK07986 118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFA-PAPQSRFDGEWDERDIAPFAR 196 (428)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEE-CCCCcccchhhHHHHHHHHHH
Confidence 99997642 2 368999999999865433222 11 11122 1111100 125677888
Q ss_pred hhcc-CCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEEccccc
Q 015890 158 TLET-KPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNLFSFSK 230 (398)
Q Consensus 158 ~l~~-~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~~s~sK 230 (398)
.++. ...+.+|+++.. +...|.. .+++.+++|.++|++||+++|+||++ ++..|........+ .+++ +++|
T Consensus 197 ~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~--t~gK 274 (428)
T PRK07986 197 LMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL--CLGK 274 (428)
T ss_pred HHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE--Eech
Confidence 8862 223677888763 6666764 56789999999999999999999999 55555432222111 1233 5899
Q ss_pred ccCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHH
Q 015890 231 AYGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 231 ~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~ 302 (398)
.++ .| +.+|.++++ +++.+.+... ....+++.++.+.+++.+.|+..+ +..++..+...+.++.+.+
T Consensus 275 ~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~- 349 (428)
T PRK07986 275 ALT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAP- 349 (428)
T ss_pred hhh-CCcccCcchhch---HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-
Confidence 997 78 589998988 7888877542 234567788889988888887522 2333333333333333333
Q ss_pred hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+.+.+.+.-+... |.+..+.+.... ....+...++ ++||++.+. .+.+|+.... .+++++++++++|.+++
T Consensus 350 l~~~~~i~~vRg~-Gl~~~ve~~~~~-~~~~~~~~l~-~~Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~l 421 (428)
T PRK07986 350 LRDAPMVADVRVL-GAIGVVETTRPV-NMAALQRFFV-EQGVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRAV 421 (428)
T ss_pred HhcCCCEEeEecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2233433333344 566666665322 3456666664 899999874 2589998776 79999999999999998
Q ss_pred HH
Q 015890 382 EE 383 (398)
Q Consensus 382 ~~ 383 (398)
++
T Consensus 422 ~~ 423 (428)
T PRK07986 422 QD 423 (428)
T ss_pred hh
Confidence 54
No 260
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-21 Score=184.91 Aligned_cols=346 Identities=14% Similarity=0.078 Sum_probs=221.4
Q ss_pred HcCCCeEEcCCc-cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 27 RGAKNAVSLAQG-VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 27 ~~g~~~~~l~~g-~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
.+|+.|+||..+ ...++ .+|.+.+++.+++.+.. +.......+....+++.+.+..+...+.+++++|+++|++.
T Consensus 69 ~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~ 145 (459)
T PRK06082 69 VDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGM 145 (459)
T ss_pred CCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHH
Confidence 357889999733 23344 68999999999987632 21112224556667777766654334689999999999999
Q ss_pred HHHHhc--cCCCEEEEeCCCCcChhhHHH-hcCcE------------EEEeccCCC-CC--CC-CC------hHHHHHhh
Q 015890 105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVT------------HILVGPCSS-KT--LH-PD------ADWLEKTL 159 (398)
Q Consensus 105 ~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~-~~--~~-~d------~e~l~~~l 159 (398)
+++... ....+|+....+|++....+- ..|.. +..+ +.+. .. +. .| ++.+++.+
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i 224 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERI-PPAVSYRGAFPDADGSDVHYADYLEYVI 224 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEe-CCCcccccccCChhHHHHHHHHHHHHHH
Confidence 998764 223689999999988764332 22211 1112 1110 00 10 01 35577777
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG- 236 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G- 236 (398)
+....+++|+++..++..+...+++.++++.++|++||+++|+||++ ++..|........+....+-+++|.+| .|
T Consensus 225 ~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~-gG~ 303 (459)
T PRK06082 225 EKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLG-GGL 303 (459)
T ss_pred hcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEeccccc-CCC
Confidence 63334788888876766555788899999999999999999999999 655554322111111111225899998 67
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
+++|.++.+ +++...........+++.++.+.+++.+.|+.. ++..++..+.-...++.|.+..++++.+.-+..
T Consensus 304 ~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 380 (459)
T PRK06082 304 VPIAAMITK---DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRG 380 (459)
T ss_pred CcceEEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeee
Confidence 599999988 565543321111257778899988888888752 233344444444445555554445565444555
Q ss_pred CccEEEEeeCCCCCC----C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 315 EGAIYLWARLPEKHL----D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~----~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
. |.++.+.+..... + ...++..++ ++||.+.+. ..+.+|++... .++++++++++++.+++.++.+
T Consensus 381 ~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 381 I-GLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS----QGNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred c-cceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 5 6666666642110 1 234555554 899999773 24789999776 7999999999999999988754
No 261
>PLN02509 cystathionine beta-lyase
Probab=99.91 E-value=6.4e-22 Score=186.19 Aligned_cols=289 Identities=20% Similarity=0.182 Sum_probs=193.9
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcE
Q 015890 61 ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVT 136 (398)
Q Consensus 61 ~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~ 136 (398)
.+.|... +. ..++.+.++++++.+ .+..++++|+++++..++ .++++||+|+++.+.|.++.. .+...|++
T Consensus 124 ~~~Y~r~-gn-pt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~ 198 (464)
T PLN02509 124 PYDYTRS-GN-PTRDALESLLAKLDK--ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVV 198 (464)
T ss_pred CCccCCC-CC-HHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence 3456544 44 367888888877765 456677788888987655 578999999999999988763 34567888
Q ss_pred EEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccc
Q 015890 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHC 215 (398)
Q Consensus 137 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~ 215 (398)
++.+ +. .|++++++.+++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .+..+.+.
T Consensus 199 v~~v-d~------~d~e~l~~ai~~~T--klV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~~pl- 265 (464)
T PLN02509 199 VKRV-NT------TNLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLSRPL- 265 (464)
T ss_pred EEEe-CC------CCHHHHHHhCCcCC--eEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccCChh-
Confidence 8877 42 26899999998765 99999999999999876 999999999999999999999 44433222
Q ss_pred cccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890 216 CVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294 (398)
Q Consensus 216 ~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 294 (398)
..+.+++++|++|.++.+| .-.|++++++ +.+.+.+...........++...+.+...|+. +..+.++..+
T Consensus 266 --~~gaDivv~S~tK~l~G~gdv~gG~v~~~~--~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t----L~~R~~r~~~ 337 (464)
T PLN02509 266 --ELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQE 337 (464)
T ss_pred --hcCCcEEEecCcccccCCCccceeEEEecc--HHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh----HHHHHHHHHH
Confidence 1234588999999996423 3467777654 45555554443333334455555555545543 6778888889
Q ss_pred HHHHHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeE---EecCCCC--
Q 015890 295 NREIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC-- 352 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~-- 352 (398)
++..+.+.|++++.+ +|..|. .+-.+.+.+. . .+...++++.-.+. +.-|...
T Consensus 338 nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~----~~~~~~f~~~l~l~~~a~slG~~~SL 412 (464)
T PLN02509 338 NARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-S----VALSKHLVETTKYFSIAVSFGSVKSL 412 (464)
T ss_pred HHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-C----HHHHHHHHHcCCcceEcccCCCCCce
Confidence 999999999987764 233221 1223444552 1 23333344333322 1111100
Q ss_pred --------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 --------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 --------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .++.||+|++- |+.+.+++.|.++++.
T Consensus 413 i~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 413 ISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFRT 461 (464)
T ss_pred eeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHcc
Confidence 0 13689999997 6777888888888754
No 262
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=4e-22 Score=187.75 Aligned_cols=159 Identities=23% Similarity=0.290 Sum_probs=128.7
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 141 (398)
+.+...++++.++++. |. +..++++|+++|+..++.+++++||+|+++.+.|++.. ..++..|++++.+
T Consensus 55 ~~p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v- 127 (418)
T TIGR01326 55 MNPTTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV- 127 (418)
T ss_pred CChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE-
Confidence 3444566777777665 43 46788999999999999999999999999999996543 3456789999888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| .++...+ ...+
T Consensus 128 ~~~------d~~~l~~~l~~~t--~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~~~---l~~g 193 (418)
T TIGR01326 128 DPD------DPEEFEKAIDENT--KAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLCRP---IDHG 193 (418)
T ss_pred CCC------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcCCc---hhcC
Confidence 532 7899999998765 99999999999999998 899999999999999999999 4322111 2234
Q ss_pred cEEEEcccccccCCCcceeEEEEcc
Q 015890 221 HVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
.++++.|++|.++.+|.|+|+++++
T Consensus 194 ~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 194 ADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred CeEEEECccccccCCccceEEEEEe
Confidence 6799999999999889999998886
No 263
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.91 E-value=1.9e-21 Score=185.79 Aligned_cols=344 Identities=14% Similarity=0.085 Sum_probs=220.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQA 101 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a 101 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +... ....+....+++.+.+.+ +.+-+.++++++|++|
T Consensus 86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA 163 (504)
T PLN02760 86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEA 163 (504)
T ss_pred CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHH
Confidence 4689999998863 3443 689999999999876321 1111 123445566666665543 2233579999999999
Q ss_pred HHHHHHHhc------c-CC-CEEEEeCCCCcChhhHHHh-cCcE------------EEEeccCCC-CCC----C------
Q 015890 102 FVNIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQM-TGVT------------HILVGPCSS-KTL----H------ 149 (398)
Q Consensus 102 ~~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~-~~~----~------ 149 (398)
++.+++... . ++ .+|+....+|++.....-. .|.. +... +.+. ..+ .
T Consensus 164 ~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~ 242 (504)
T PLN02760 164 NDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHT-DCPHYWRFHLPGETEEEFS 242 (504)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEe-CCCcccccCCCCCcHHHHH
Confidence 999999874 1 23 6899999999887543322 2211 1111 1110 000 0
Q ss_pred -CChHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890 150 -PDADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 150 -~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i 223 (398)
...+++++.+. ....+++|+++..+...|.+ .|++.+++|.++|++||+++|+||++ |+..|........+...
T Consensus 243 ~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~P 322 (504)
T PLN02760 243 TRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKP 322 (504)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCC
Confidence 01245666664 22336888888777777875 57888999999999999999999999 76666543322222223
Q ss_pred EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLV 293 (398)
Q Consensus 224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~ 293 (398)
.+.+++|.+| .| +++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+... +.+++..+...
T Consensus 323 DivtlgK~lg-gG~~PigAv~~~---~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~ 398 (504)
T PLN02760 323 DLVSLAKALS-SAYMPIGAVLVS---PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAP 398 (504)
T ss_pred cEEEeccccc-CCccccceEeec---HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3568899997 56 489999998 788777653 1234577889999999999987522 22333333333
Q ss_pred HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC--C--------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL--D--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~ 363 (398)
..++.|.+. .+.+.+.-+... |.++.+.+..... + ...+...++ ++||.+.+. .+.+|+++.
T Consensus 399 ~l~~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~lrl~Pp 470 (504)
T PLN02760 399 RFQDGIKAF-SGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVA-----GDNIMMSPP 470 (504)
T ss_pred HHHHHHHHH-hcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEec-----CCEEEEECC
Confidence 334444332 444443334455 5666666632110 0 234556554 899999763 257999977
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHh
Q 015890 364 G-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 364 ~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
. .+++|++++++++.+++.++.
T Consensus 471 l~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 471 LIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6 699999999999999998764
No 264
>PRK05965 hypothetical protein; Provisional
Probab=99.91 E-value=3.1e-21 Score=183.30 Aligned_cols=347 Identities=15% Similarity=0.098 Sum_probs=223.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+.. +.........+.+..+++.+....+.+.+.+++++++++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~-~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELP-YATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcC-CcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 4689999998764 3332 58999999999987632 101000112344456666666554434568999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CC--CCCC--------
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KT--LHPD-------- 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~--~~~d-------- 151 (398)
.+++.... ++ .+|+....+|++....+... +. .+..+ +.+. .. +.-|
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKI-PSPYPYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEc-CCCcccccccCCChHHHHHHH
Confidence 99987541 22 57999999999976432111 11 01122 1110 00 0112
Q ss_pred hHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.++. ...+++|+++..+...|.+ .|++.++++.++|++||+++|.||++ |+..|........+....+-
T Consensus 201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence 2567777752 1347899999777777874 67789999999999999999999999 66666443332222223344
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 296 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 296 (398)
+++|.++ .| +++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+.. ++.+++..+.-....
T Consensus 281 ~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~ 356 (459)
T PRK05965 281 TVAKGLT-SGYVPMGAVLMS---DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFA 356 (459)
T ss_pred Eechhhc-cCCcceeEEEEc---HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 7789997 78 499999999 788776642 223457788999999999988752 123333333334444
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+.+.+. .+.+.+.-+... |.++.+.+.... . -...+...+ .++||++.+. ..+.||+.+.- .
T Consensus 357 ~~l~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~~~----g~~~i~~~PpL~i 429 (459)
T PRK05965 357 AGLDAL-RAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRA-YANGLVFRAF----GDGVLGFAPALCC 429 (459)
T ss_pred HHHHhh-ccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHH-HhCCeEEEec----CCcEEEEECCCcC
Confidence 444442 334543334455 566666663211 0 023455555 4899999763 24679998776 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++++++++|.++++++..
T Consensus 430 t~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 430 TEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998744
No 265
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=7.4e-22 Score=166.00 Aligned_cols=329 Identities=18% Similarity=0.203 Sum_probs=227.4
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
..+||-.- .-..|..+++++|.++...++. |+.++....|++..++.++ .+.-+|++|+|.++.++++.-+
T Consensus 22 ~~vDLRSD-TvT~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G------KEAgLFv~SGTmgNllaIm~Hc 92 (384)
T KOG1368|consen 22 RSVDLRSD-TVTVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG------KEAGLFVPSGTMGNLLAIMVHC 92 (384)
T ss_pred eccccccc-cccCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC------ccceeeecccccccHHHHHHHh
Confidence 34555433 2334689999999998776544 5555556788888888874 4556788888899999998877
Q ss_pred -cCCCEEEEeCCCC-cChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc------cCCCCeEEEEeCCCCCCc-c
Q 015890 111 -DAGDSVVMFAPYY-FNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE------TKPTPKLVSVVNPGNPSG-T 179 (398)
Q Consensus 111 -~~gd~Vl~~~p~~-~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~------~~~~~~~v~i~~p~nptG-~ 179 (398)
++|.+||+.+-+| +.|. ......|+.+..+ ... ++..+++++||+.++ +.+..++|++.+-+|.+| .
T Consensus 93 ~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv-~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~ 170 (384)
T KOG1368|consen 93 HQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV-KNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGK 170 (384)
T ss_pred cCCCceEEeccchheeehhccChhhhccceeEee-eeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCce
Confidence 5899999999888 3333 2445667777777 333 334689999999998 234468999998765555 8
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
++|.|++.++.+||++||+.++.|.+. |.. .+.+..-.-...+-+.-.+||.+|.| +|.++..+ ++++++-
T Consensus 171 vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~--k~FI~kA 245 (384)
T KOG1368|consen 171 VLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGS--KDFIDKA 245 (384)
T ss_pred EeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEcc--HHHHHHH
Confidence 999999999999999999999999998 322 23222111011112233678998644 67655443 7888887
Q ss_pred HHhhccCCCCcchHHH--HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChH
Q 015890 256 LKVQDNIPICASIISQ--HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 256 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 332 (398)
...+.....++-.... +++.-+|++ .+ ...+.-.+++..+.+.+...+.+++.-+ ...+++.+.+-....+..
T Consensus 246 ~~~RKalGGGmRQsGvLaaaaLval~~--~~--~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~ 321 (384)
T KOG1368|consen 246 RHFRKALGGGMRQSGVLAAAALVALDE--NV--PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAE 321 (384)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHhhc--ch--HHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHH
Confidence 7666655555544444 444444443 22 2445556677778888887775555444 447888777755556888
Q ss_pred HHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH-HHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR-RGLEEL 384 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~-~~~~~~ 384 (398)
++++.+ +++||.+.++. ...+|+.+.+ .+.++++.....+. .++.+.
T Consensus 322 ~l~~~~-~k~gi~lm~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 322 ELCKFL-EKNGILLMGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred HHHHHH-HHCCeEEeecc----ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 999987 58999999875 4459999999 89999999999984 444443
No 266
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=3.3e-21 Score=183.08 Aligned_cols=344 Identities=13% Similarity=0.077 Sum_probs=223.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.. +.. ......+.+..+++.+....+...+.+++++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~-~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 121 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLE-HVI-LAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIE 121 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcC-Ccc-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 4688999998764 3333 58999999999987631 111 11122345566677666554433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCC-----CC------CCC
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSK-----TL------HPD 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~-----~~------~~d 151 (398)
.+++.... +| .+|+....+|++....+-..+.. +..+ |.+.. +. .-+
T Consensus 122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 200 (466)
T PRK07030 122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKV-PSPDCYLRPEGMSWEEHSRRM 200 (466)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEc-CCCCccccccCCCHHHHHHHH
Confidence 99998631 23 57999999999976544332211 1112 11110 00 002
Q ss_pred hHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.++ ....+++|+++. .+...|. ..+++.++++.++|++||+++|+||++ |+..|........+....+-
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv 280 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL 280 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence 456677775 223478888886 4666777 467789999999999999999999999 66666433222222222344
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNR 296 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 296 (398)
+++|.++ .| +++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+..+ +.+++..+.-.+.+
T Consensus 281 ~~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~ 356 (466)
T PRK07030 281 CLSKALT-GGYLPLAAVLTT---DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMA 356 (466)
T ss_pred eeehhcc-CCcccceEEEec---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 6789998 78 499999999 788776642 2344577789999999999887522 33333333334444
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+.+.+. .+.+.+.-+... |.++.+.+.+... + ...+...++ ++|+.+.+. .+.+|+.+.. .
T Consensus 357 ~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~i~~~Ppl~i 428 (466)
T PRK07030 357 EATAHL-ADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-----GSVVYFLPPYVI 428 (466)
T ss_pred HHHHHH-hcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCccC
Confidence 444433 344543334455 6667776642110 0 124556554 899999763 2579998666 7
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q 015890 366 VEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~ 385 (398)
+++++++++++|.++++++.
T Consensus 429 t~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 429 TPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999984
No 267
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.91 E-value=5.5e-21 Score=179.02 Aligned_cols=309 Identities=19% Similarity=0.146 Sum_probs=210.6
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~ 123 (398)
+++-++++.+.+.... |...+...++++.++++++ . ++.++++|+++|+..++.++ +++||+|+++.++|
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g----~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~ 79 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG----A--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITF 79 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC----C--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcch
Confidence 4566778888776542 3345567889999999884 3 34566778899999999998 78999999999999
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
..+...++..|++++.+ +.+++.+.+|++++++.++ ++ +++|+++ |++|...+ +++|.++|+++|++
T Consensus 80 ~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~~--t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 80 VATANCALYCGAKVDFV-DIDPDTGNIDEDALEKKLAAAKGKL--PKAIVPV---DFAGKSVD---MQAIAALAKKHGLK 150 (380)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHhhcccCCC--ceEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence 99998899999999999 8876667789999999998 44 4888755 46898888 89999999999999
Q ss_pred EEEeece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------
Q 015890 200 LVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------ 262 (398)
Q Consensus 200 livDe~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~------------ 262 (398)
+|+|++| ++ +++.+..... ..++.+.|++ |.++.+ ..|+++.++ +++.++++......
T Consensus 151 lI~D~a~a~g~~~~~~~~g~~~-~~d~~~~S~~~~K~~~~~--~GG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 225 (380)
T TIGR03588 151 IIEDASHALGAEYGGKPVGNCR-YADATVFSFHPVKIITTA--EGGAVTTND--EELAERMRLLRSHGITKDPLLFEKQD 225 (380)
T ss_pred EEEECCCcccCccCCEeCCCcc-ccceEEEecCCCCccccc--CceEEEECC--HHHHHHHHHHHHCCCCCCcccccccc
Confidence 9999999 43 3343222200 1235566765 888632 467777776 67777765433210
Q ss_pred -------------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----cc-EEEEeeC
Q 015890 263 -------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARL 324 (398)
Q Consensus 263 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~-~~~~~~~ 324 (398)
.+.++....+.+...|+ .+++..++-+++.+++.+.|+.++.+.+..+. .. ....+.+
T Consensus 226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~----~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 301 (380)
T TIGR03588 226 EGPWYYEQQELGFNYRMTDIQAALGLSQLK----KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILL 301 (380)
T ss_pred cCcceeeeeccccccCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEE
Confidence 01112222222222332 24666677777888899999888765543321 11 2233344
Q ss_pred CC-CCCChHHHHHHHHHhcCeEEecCCCC-----------C---C-------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 325 PE-KHLDDFEVVRWLAHRHGVVVIPGGAC-----------G---C-------RGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 325 ~~-~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~---~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+. ...+..++.+.| +++||.++....+ . . ...+++.+.. .+++|++..++.|++++
T Consensus 302 ~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 302 DQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 32 123567777776 5889988744321 0 0 1468887776 78999999999888763
No 268
>PRK06105 aminotransferase; Provisional
Probab=99.91 E-value=1.9e-21 Score=184.75 Aligned_cols=347 Identities=14% Similarity=0.081 Sum_probs=224.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+.... ........+.+..+++.+.+..+.+-+.+++++++++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFY-HTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCe-ecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4689999998764 3333 5899999999998763210 1111122345556666666655433467999999999999
Q ss_pred HHHHHhc------c-CC-CEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CCCC-----------C
Q 015890 104 NIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KTLH-----------P 150 (398)
Q Consensus 104 ~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~~~-----------~ 150 (398)
.+++... . ++ .+|+....+|++....+-.. +. .+..+ +.+. ..+. .
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHT-GCPHYYRFGLPGESEEAFATR 202 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEc-CCCcccccccCCCChHHHHHH
Confidence 9999853 1 23 58999999998876433221 11 01111 1110 0000 0
Q ss_pred ChHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 151 DADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 151 d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
.++++++.+. ....+++|+++..+...|.. .+++.++++.++|++||+++|+||++ ++..|........+....+
T Consensus 203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi 282 (460)
T PRK06105 203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCe
Confidence 1356777774 22347889988777777875 68889999999999999999999999 6655543332222222334
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN 295 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 295 (398)
.+++|.++ .| +++|+++++ +++.+.+... ....+++.|+.+.+++.+.|+.. ++.+++..+.-...
T Consensus 283 ~~~gK~lg-gG~~P~~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l 358 (460)
T PRK06105 283 LVMSKQLS-SSYQPLSAVLMN---EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARL 358 (460)
T ss_pred eeeecccc-cCcccceEEEEc---HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 58899997 56 689999999 7887776532 13456778889998888888752 23334444444444
Q ss_pred HHHHHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890 296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 364 (398)
Q Consensus 296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~- 364 (398)
++.|.+. ++++.+..+... |.+..+.+..... . ...+...+ .++||.+.+. .+.+|+++..
T Consensus 359 ~~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~-~~~Gvl~~~~-----g~~i~l~Ppl~ 430 (460)
T PRK06105 359 QARLRAL-ADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAA-HEHGVISRAM-----GDTLAFCPPLI 430 (460)
T ss_pred HHHHHHh-hcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHH-HHCCeEEEec-----CCEEEEECCCc
Confidence 5555543 555544444455 6666666532110 0 13455555 4899999873 2589999776
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 365 LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+++|+++++++|.++++++...
T Consensus 431 it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 431 ITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999887653
No 269
>PRK06917 hypothetical protein; Provisional
Probab=99.91 E-value=5.2e-21 Score=181.13 Aligned_cols=353 Identities=13% Similarity=0.095 Sum_probs=226.7
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.. +.+. .....+.+..+++.+....+...+.+++++++++|++
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~-~~~~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 105 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVS-FVYR-SQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANE 105 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCc-Cccc-cccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHH
Confidence 5789999998774 3343 58999999999987632 2211 1112345566777776655433457999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-CcE------------EEEeccCCC-CC--CC--------CC
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GVT------------HILVGPCSS-KT--LH--------PD 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~-~~--~~--------~d 151 (398)
.+++.... +| .+|+....+|+++...+-.. +.. +..+ +.+. .. +. -+
T Consensus 106 ~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 184 (447)
T PRK06917 106 TAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTI-SAPYCYRCPVQKVYPTCQLAC 184 (447)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEe-CCCcccccccCCChHHHHHHH
Confidence 99998631 23 68999999999977544221 110 1111 1110 00 00 02
Q ss_pred hHHHHHhhccC--CCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 152 ADWLEKTLETK--PTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 152 ~e~l~~~l~~~--~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
++.+++.++.. ..+++|+++..+. ..|. ..+++.++++.++|++||+++|+||++ |+..|........+....+
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi 264 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI 264 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence 45667777622 2378899986554 3445 567889999999999999999999999 6555543322212212224
Q ss_pred cccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREI 298 (398)
Q Consensus 226 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 298 (398)
.+++|.++ .|+ ++|.++++ +++.+.+... ....+++.++...+++.+.|+.. .+.+++..+.-.+.++.
T Consensus 265 ~~~gK~l~-~G~~Pi~a~~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~ 340 (447)
T PRK06917 265 MTLGKGLG-AGYTPIAATVVS---DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKG 340 (447)
T ss_pred EEeeehhc-cCCcceEEEEEc---HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 47799997 785 89999998 7887776532 22346778899999999988752 23344444444445555
Q ss_pred HHHHhccCCCCccccCCccEEEEeeCCCCC------CC----hHHHHHHHHHhcCeEEecCCC-C-C-CCCeEEEEecC-
Q 015890 299 IREALSPLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGA-C-G-CRGHLRISFGG- 364 (398)
Q Consensus 299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~ll~~~gi~v~~g~~-~-~-~~~~iRi~~~~- 364 (398)
|.+..++.+.+.-+... |.++.+.+.+.. .. ...++..++ ++||.+.+... . + ..+.+|++...
T Consensus 341 L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~ 418 (447)
T PRK06917 341 LQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMT 418 (447)
T ss_pred HHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCc
Confidence 55555556554444455 566656553110 01 234555554 89999987531 1 1 24689999775
Q ss_pred CCHHHHHHHHHHHHHHHHHHhccc
Q 015890 365 LVEDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
.+++|+++++++|.++++++.+++
T Consensus 419 it~~eid~~~~~l~~~l~~~~~~~ 442 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEEMMQKG 442 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 699999999999999999886543
No 270
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=3.4e-21 Score=182.50 Aligned_cols=348 Identities=12% Similarity=0.082 Sum_probs=220.8
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.... .......+....+++.+.+..+...+.+.+++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e 127 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHS--MIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVD 127 (457)
T ss_pred CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccc--ccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHH
Confidence 4688999998774 3333 5899999999998763211 111111234445666665554433468999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCC-CC--CC----CCh--------
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS-KT--LH----PDA-------- 152 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~--~~----~d~-------- 152 (398)
.+++... ....+|+....+|++....+... |. .+..+ |.+. .. +. .+.
T Consensus 128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWI-PYPNPYRNPWGINGYEEPDELINRFL 206 (457)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEe-CCCccccccccccccCCHHHHHHHHH
Confidence 9999864 23368999999999976533221 10 12222 2211 00 00 022
Q ss_pred HHHHHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 153 DWLEKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 153 e~l~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
+.+++.+. ....+++|+++..+...|.+ .|++.++++.++|++||+++|+||++ |+..|........+....+
T Consensus 207 ~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi 286 (457)
T PRK05639 207 DYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDL 286 (457)
T ss_pred HHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCE
Confidence 23555442 12347899999777777874 57889999999999999999999999 6555543222111111122
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l 303 (398)
-+++|.++ .|+++|+++++ +++.+ ........+++.++...+++.+.|+.. ++.+++..+.-...++.|.+..
T Consensus 287 v~~gK~l~-gG~pi~av~~~---~~i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~ 361 (457)
T PRK05639 287 IIFGKGVA-SGMGLSGVIGR---KELMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMK 361 (457)
T ss_pred EEechhhc-CCCcceeEEeh---HHHHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 24799997 78999999998 67766 222122346677888888888888752 2333444444444455555544
Q ss_pred ccCCCCccccCCccEEEEeeCCCCCC--C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 304 SPLGEGAVKGGEGAIYLWARLPEKHL--D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
.+.+.+.-+... |.++.+.+..... + ...++..++ ++|+++.+... ..+.+|+.+.. .+++++++++++|
T Consensus 362 ~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g~--~~~~lr~~Ppl~it~~~id~~~~~l 437 (457)
T PRK05639 362 ESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYGM--FGNVIRITPPLVITKEIAEKGLEIM 437 (457)
T ss_pred HhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHH
Confidence 555544444555 5666666532110 1 234555554 79999976421 24789999887 8999999999999
Q ss_pred HHHHHHHhc
Q 015890 378 RRGLEELVK 386 (398)
Q Consensus 378 ~~~~~~~~~ 386 (398)
.+++.++.+
T Consensus 438 ~~~l~~~~~ 446 (457)
T PRK05639 438 ERAIKDALA 446 (457)
T ss_pred HHHHHHHHH
Confidence 999988754
No 271
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=1.2e-21 Score=181.94 Aligned_cols=213 Identities=21% Similarity=0.219 Sum_probs=153.2
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (398)
+...++++.++++. |.+ .. +++++++.++..++ .++++||+|+++.|.|.+... .++..|++++.+ +.
T Consensus 50 p~~~~Le~~lA~l~----g~~-~~-~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~ 121 (377)
T PRK07671 50 PTRAALEELIAVLE----GGH-AG-FAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV-DT 121 (377)
T ss_pred hHHHHHHHHHHHHh----CCC-ce-EEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE-CC
Confidence 33455666666554 543 33 44555667887665 577899999999999975443 345578998888 43
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
.|++.+++++++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| ..+...+. ..+.+
T Consensus 122 ------~d~~~l~~ai~~~t--klV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~p~---~~g~D 187 (377)
T PRK07671 122 ------SNLEEVEEAIRPNT--KAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQSPI---SLGAD 187 (377)
T ss_pred ------CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hhCCe
Confidence 27899999998765 99999999999999988 999999999999999999999 43322221 23446
Q ss_pred EEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301 (398)
Q Consensus 223 i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 301 (398)
+++.|++|.++.++ .-.|++++++ +++++.+...+.......++...+.+...++ .+..+.++.+++...+.+
T Consensus 188 ivv~S~sK~l~G~~~~~~G~~v~~~--~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~~la~ 261 (377)
T PRK07671 188 IVLHSATKYLGGHSDVVAGLVVVNS--PELAEDLHFVQNSTGGILGPQDSWLLLRGLK----TLGIRMEEHETNSRAIAE 261 (377)
T ss_pred EEEecCcccccCCccceeEEEEeCc--HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHHHHHH
Confidence 88999999997332 3467777764 6788888777665455555555544443333 356677788888999999
Q ss_pred HhccCCC
Q 015890 302 ALSPLGE 308 (398)
Q Consensus 302 ~l~~~~~ 308 (398)
.|++.+.
T Consensus 262 ~L~~~~~ 268 (377)
T PRK07671 262 FLNNHPA 268 (377)
T ss_pred HHHcCCC
Confidence 9987765
No 272
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=2.5e-21 Score=183.73 Aligned_cols=345 Identities=14% Similarity=0.097 Sum_probs=222.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-----CCCcEEEecCh
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGA 98 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-----~~~~v~~~~g~ 98 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+-. + ........+.+..+++.+....+. +.+.+++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~-~-~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG 138 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELE-Q-VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG 138 (472)
T ss_pred CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCC-C-ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence 4688999998774 3333 58999999999886421 1 101111234456666666654432 23589999999
Q ss_pred HHHHHHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-C--CC-----
Q 015890 99 NQAFVNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-T--LH----- 149 (398)
Q Consensus 99 t~a~~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~--~~----- 149 (398)
++|++.+++.... +| .+|+....+|++....+-..+. .+..+ |.+.. . +.
T Consensus 139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~-~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA-PSPDAYLAEPGQSAED 217 (472)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe-CCCCccccccCCCHHH
Confidence 9999999998642 22 6899999999997644432221 11122 11110 0 00
Q ss_pred ---CChHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCc
Q 015890 150 ---PDADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDH 221 (398)
Q Consensus 150 ---~d~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~ 221 (398)
-+++.+++.++ ....+.+|+++. .++..|. ..|++.++++.++|++||+++|.||++ |+..|........+.
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv 297 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC
Confidence 02466777775 223478888886 4677787 567889999999999999999999999 666664433322222
Q ss_pred EEEEcccccccCCCcc-eeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLV 293 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 293 (398)
...+-+++|.++ +|+ ++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+..+ +.+.++.+...
T Consensus 298 ~PDiv~~gKgl~-gG~~Plaav~~~---~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g 373 (472)
T PRK08742 298 MPDLLCLSKGLT-GGFLPLSAVLAT---QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTA 373 (472)
T ss_pred CCCEEEEccccc-CCCCCcceeecc---HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 233446789997 784 99999999 777776642 1234577789999999999887522 22223333332
Q ss_pred HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~ 363 (398)
+....+.+.+++++.+.-+... |+++.+.+..... + ...+...++ ++||++.+. .+.|||.+.
T Consensus 374 ~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~vi~~~Pp 446 (472)
T PRK08742 374 ARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL-----GDVLYWMPP 446 (472)
T ss_pred HHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECC
Confidence 2222344445556654445555 6667776642110 0 123455554 899999873 268999988
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHh
Q 015890 364 G-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 364 ~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
- .+++++++++++|.++++++.
T Consensus 447 L~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 447 YCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHh
Confidence 7 799999999999999998764
No 273
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.91 E-value=2.8e-21 Score=181.83 Aligned_cols=340 Identities=13% Similarity=0.074 Sum_probs=218.7
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ -+|++.+++.+++.+.. .+.......+.+..+++.+....+...+.+++++++++|++
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 118 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMS--HIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVE 118 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcC--CccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHH
Confidence 4689999998763 3332 57999999999987632 11111112344455666665544433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCCCC-----CCChHHHH
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLE 156 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~e~l~ 156 (398)
.+++.... +| .+|+....+|++....+-.. +. .+..+ |.+...+ .-+++.++
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~l~~l~ 197 (429)
T PRK06173 119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFL-PQPSIKFGEEWNDEAIEPLQ 197 (429)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEe-CCCCcccchhHHHHHHHHHH
Confidence 99987642 23 57999999998854222111 10 11122 2111100 01356677
Q ss_pred Hhhc-cCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccc
Q 015890 157 KTLE-TKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFS 229 (398)
Q Consensus 157 ~~l~-~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~s 229 (398)
+.+. ....+++|+++.. ++..|.. .|++.++++.++|++||+++|+||++ ++..|........ ..+++ +++
T Consensus 198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--~~g 275 (429)
T PRK06173 198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIM--CIG 275 (429)
T ss_pred HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEE--Eee
Confidence 7775 2234788998864 7777875 78889999999999999999999999 5555543222111 12244 489
Q ss_pred cccCCCc-ceeEEEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 230 KAYGMMG-WRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 230 K~~~~~G-~r~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
|.++ .| +.++.++.+ +++.+.+.. .....+++.++...+++.+.|+...+ +...++.+++.+++.+.|
T Consensus 276 K~l~-gG~~p~~a~~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L 349 (429)
T PRK06173 276 KALT-GGYLTLSATITT---EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE--SPWQQNIQRIEAQLKQEL 349 (429)
T ss_pred hhhh-CCccccceEEec---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 9997 77 478999988 777777642 12334566788888888888875221 122344444455555555
Q ss_pred cc---CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 304 SP---LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 304 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
++ .+.+.-+... +.++.+.+... .+...+...+. ++||++.+. .+.||+.+.. .+++++++++++|.+
T Consensus 350 ~~~~~~~~v~~vRg~-Gl~~~iel~~~-~~~~~i~~~l~-e~Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~ 421 (429)
T PRK06173 350 APAAEFDSVAEVRVL-GAIGVVEMKEP-VNMATLQPRFV-EHGIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLR 421 (429)
T ss_pred HHhhcCCCeeeeecc-ceEEEEEeCCc-ccHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 43 2322222244 66676777532 13456676664 889999774 2589999887 799999999999999
Q ss_pred HHHHHh
Q 015890 380 GLEELV 385 (398)
Q Consensus 380 ~~~~~~ 385 (398)
++.++.
T Consensus 422 ~l~~~~ 427 (429)
T PRK06173 422 VLKQEY 427 (429)
T ss_pred HHHHHh
Confidence 998754
No 274
>PRK07483 hypothetical protein; Provisional
Probab=99.91 E-value=6.3e-21 Score=180.37 Aligned_cols=351 Identities=15% Similarity=0.124 Sum_probs=226.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|.+.+++.+++.+... +.......+....+++.+....+...+.+++++++++|++
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 104 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY--AHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVE 104 (443)
T ss_pred CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHH
Confidence 4789999998874 3343 689999999999876321 1111112344556666666554433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCC-CCCCC---C--------
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCS-SKTLH---P-------- 150 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~-~~~~~---~-------- 150 (398)
.+++.... ++ .+|+....+|++....+-.... .+..+ +.. ..... .
T Consensus 105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 183 (443)
T PRK07483 105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHV-SPCYAYREQRAGESDEAYGQR 183 (443)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEe-CCCccccccccCCCHHHHHHH
Confidence 99997542 33 5799999999987643322210 11112 111 01000 0
Q ss_pred ChHHHHHhhc--cCCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890 151 DADWLEKTLE--TKPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 151 d~e~l~~~l~--~~~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~ 224 (398)
.++.+++.+. ....+++|+++..+. ..|. ..+++.++++.++|++||+++|+||++ |+..|........+....
T Consensus 184 ~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD 263 (443)
T PRK07483 184 LADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD 263 (443)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC
Confidence 0256666554 223378888886664 3465 567889999999999999999999999 665554333222222222
Q ss_pred EcccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890 225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE 297 (398)
Q Consensus 225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 297 (398)
+-+++|.++ .|+ ++|.++.+ +++.+.+... ....+++.++.+.+++.+.|+.. ++.+++..+.-...++
T Consensus 264 iv~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~ 339 (443)
T PRK07483 264 LVTIAKGLG-AGYQPIGAVLAS---DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRA 339 (443)
T ss_pred eeeehhhhc-cCccccEEEEEc---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 447789997 785 99999999 7777766432 23457778999999999988752 2344444444555566
Q ss_pred HHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCC--C-CCCeEEEEecC
Q 015890 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG 364 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~--~-~~~~iRi~~~~ 364 (398)
.|.+.+++++.+.-+... |.++.+.+.+.. . ....++..++ ++|+++.+.... + ..+.|||....
T Consensus 340 ~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~PpL 417 (443)
T PRK07483 340 RLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAPPF 417 (443)
T ss_pred HHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEECCC
Confidence 666666666654444455 566666653211 0 0234556555 899999875321 1 14689999877
Q ss_pred -CCHHHHHHHHHHHHHHHHHHhc
Q 015890 365 -LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+++++++++++|.+++.++..
T Consensus 418 ~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 418 IITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 7999999999999999987653
No 275
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.91 E-value=2e-21 Score=178.37 Aligned_cols=313 Identities=12% Similarity=0.105 Sum_probs=220.4
Q ss_pred CCcHHHHHHHHHhhcC---CCCCCCCCCC---CcHHHHHHHHHHHhhhcCCC-CCcEEEecC-hHHHHHHHHHHhccCCC
Q 015890 43 QPPKMAMEKVKELVWD---PSISKYGADE---GLPELRDALVKKLNQENKLY-KSSVMVTAG-ANQAFVNIVLTLCDAGD 114 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~---~~~~~y~~~~---~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g-~t~a~~~~~~~l~~~gd 114 (398)
..|..|++++.+.+.+ .....|.... .+.++.+.+.+.++++++.+ ..+|++++| +|.++++++.++..+|+
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 3588999999998874 2233443333 23367777777788888863 446777755 99999999999999999
Q ss_pred EEEEeCCCCcC--hhhHHHhcCcEEEEeccCCC---CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 115 SVVMFAPYYFN--SYMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 115 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~---~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
++++...+.++ +.+.++.+|. +..+ ..++ .+-.++++.++ +++ .+++|.+++..|.||+..+
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~v~~th~ETstGv~~~------- 148 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVV-ASGKEGNYTKIPDPSTWE--ISE--DAAYVHYCANETIHGVEFR------- 148 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEE-eccccCCCCCCCCHHhcC--CCC--CCCEEEEcCCCCcccEecc-------
Confidence 99998888865 5678888998 6655 4332 22234555554 233 3699999999999999865
Q ss_pred HHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh----------
Q 015890 190 SDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV---------- 258 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~---------- 258 (398)
++++.+++++++|.++ ++....... ..+ ++++|.+|++|++| +|.++.+ +++++++...
T Consensus 149 -~l~~~~~~l~iVDavss~g~~~id~~--~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~~~~~~~~~~~~~~~~~~ 218 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSNILSRPIDVS--KFG--LIYAGAQKNIGPAG--LTVVIVR---KDLLGRASRITPSMLNYKIH 218 (349)
T ss_pred -eecccCCCeEEEEccccccCccCCHH--Hcc--EEEEecccccCCCc--eEEEEEC---HHHHhhcccCCCCcchHHHH
Confidence 5566789999999999 665333322 233 88899999999777 6888888 6666544221
Q ss_pred h--ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccc-c-C--CccEEEEeeCCCCCCC
Q 015890 259 Q--DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVK-G-G--EGAIYLWARLPEKHLD 330 (398)
Q Consensus 259 ~--~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~ 330 (398)
. ...++|+|.....++.++|+... . .++++.++.+++.+++++.|++++++... . + .....+.+.++... .
T Consensus 219 ~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~-~ 297 (349)
T TIGR01364 219 AENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE-L 297 (349)
T ss_pred HhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh-H
Confidence 1 22346888899999888888633 3 47889999999999999999998642222 1 1 21244555655321 1
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
..++...+ .++|+++.++.. ..+.+|+|+.. .+.+|++.++++|+++++
T Consensus 298 ~~~~~~~~-~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 298 EKRFLKEA-EERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred hHHHHHHH-HHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 24554544 589997777654 34789999888 889999999999998664
No 276
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=1.3e-21 Score=183.74 Aligned_cols=286 Identities=22% Similarity=0.216 Sum_probs=189.2
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----cCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~ 142 (398)
.+...++++.++++. + .+..++++++++|+..++.+++++||+|+++.+.|.+....+.. .|+++..+ +
T Consensus 57 ~pt~~~Le~~lA~l~----g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~-d 129 (425)
T PRK06084 57 NPTNDVLEQRVAALE----G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA-A 129 (425)
T ss_pred CchHHHHHHHHHHHh----C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE-C
Confidence 344456666666664 4 23566788888999999999999999999999999865544432 46666655 3
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
. .|++.+++.+++++ ++|++++|+||||.+++ +++|.++|+++|+++|+|++| .+....+ ...+.
T Consensus 130 ~------~d~e~le~ai~~~t--klV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~p---~~~ga 195 (425)
T PRK06084 130 H------DDIAALEALIDERT--KAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCRP---FEHGA 195 (425)
T ss_pred C------CCHHHHHHHhccCC--cEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCCh---hhcCC
Confidence 2 38899999998765 99999999999999999 899999999999999999999 4443221 12345
Q ss_pred EEEEcccccccCCCcceeEEEEccC-Cc--HHHH-----------------------------HHHHHhhccCCCCcchH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAYPS-EV--EGFA-----------------------------TQLLKVQDNIPICASII 269 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~~~-~~--~~~~-----------------------------~~l~~~~~~~~~~~~~~ 269 (398)
++++.|++|.++.+|.++|.+++.+ .. .... .............+++.
T Consensus 196 Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~ 275 (425)
T PRK06084 196 DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPF 275 (425)
T ss_pred CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHH
Confidence 5889999999987888888765532 10 0100 00011122334555666
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCCh
Q 015890 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDD 331 (398)
Q Consensus 270 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~ 331 (398)
..+.+...|+. +..+.++.+++...+.+.|++++.+. +..| . .+..+.+++.. +
T Consensus 276 ~a~l~lrgl~t----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~----~ 347 (425)
T PRK06084 276 NAFLILQGLET----LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG----G 347 (425)
T ss_pred HHHHHHcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC----C
Confidence 55555555554 67777888888888999998877532 2221 1 13445556642 1
Q ss_pred HHHHHHHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+...+++++-.+... -|... + .++.||||++- |+.+.+++.|.+++.+.
T Consensus 348 ~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---Ed~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 348 QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI---EHIDDIIADLAQALDAS 423 (425)
T ss_pred HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 2223334433333321 11110 0 13689999997 67778888888888753
No 277
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=2.7e-21 Score=195.60 Aligned_cols=347 Identities=15% Similarity=0.066 Sum_probs=221.5
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVN 104 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~ 104 (398)
++++.|+.+.....++..+.+++.+.+.+.. ...|.......+..+..++.+.++++++++ .|++|+|+|++++.
T Consensus 33 ~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnl 112 (805)
T PLN02724 33 KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKL 112 (805)
T ss_pred CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHH
Confidence 4478888876665445566666655543211 111222222233444444555555587654 58999999999999
Q ss_pred HHHHh-ccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCC-------CCCCCCh--HHHHHhhc--------cCC
Q 015890 105 IVLTL-CDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSS-------KTLHPDA--DWLEKTLE--------TKP 163 (398)
Q Consensus 105 ~~~~l-~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~-------~~~~~d~--e~l~~~l~--------~~~ 163 (398)
++.++ .++||+|++..-.|.+.. ..++..|+++..+ +.+. ....+++ +.+++.++ ..+
T Consensus 113 va~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~ 191 (805)
T PLN02724 113 VGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV-DIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGE 191 (805)
T ss_pred HHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec-cchhccccccccccccccchhhhhhhhhhhhccccccCC
Confidence 99988 578999999887876544 3345568888888 6551 1112332 56666532 012
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCc
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-----GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMG 236 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-----~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G 236 (398)
.+++|.+.+.+|.||.++|.+.+..+.+.++.+ ++++++|.++ .++...... ..+.++++.|.+|++| +.|
T Consensus 192 ~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~--~~~~Dfl~~S~HK~~GgP~G 269 (805)
T PLN02724 192 AYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLS--RYPADFVVVSFYKIFGYPTG 269 (805)
T ss_pred CcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChh--hcCCCEEEEecceeccCCCC
Confidence 248999999999999999954433333322222 3689999999 666443332 2344588999999997 444
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhc------------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHH
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQD------------------------NIPICASIISQHLALYSLQTGPE-WVTERVKD 291 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 291 (398)
+|+++++ +++.+.+..... ....+.|.+...++.++++.... .+++..++
T Consensus 270 --~G~L~vr---~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~ 344 (805)
T PLN02724 270 --LGALLVR---RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMH 344 (805)
T ss_pred --ceEEEEe---hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHH
Confidence 6888888 555554432211 11235677777777777765222 25667778
Q ss_pred HHHHHHHHHHHhccCC------CCccccCC--------ccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC-
Q 015890 292 LVRNREIIREALSPLG------EGAVKGGE--------GAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC- 354 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~------~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~- 354 (398)
...+.+++.+.|++++ .++++++. .+..+.+.+.... .-....+.+++.++||.++.|..|..
T Consensus 345 ~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~ 424 (805)
T PLN02724 345 TWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPG 424 (805)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCch
Confidence 8888899999888765 35566532 1233433443211 01123355677789999999988741
Q ss_pred ----------------------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 355 ----------------------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 355 ----------------------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+.+|+|++. .+.+|++++++.|++.+...
T Consensus 425 ~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 425 ACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred HHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 2779999999 89999999999999977443
No 278
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.91 E-value=5.4e-21 Score=180.75 Aligned_cols=342 Identities=14% Similarity=0.073 Sum_probs=216.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... ........+....+++.+.+..+...+.+.+++++++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e 120 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVD 120 (442)
T ss_pred CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4689999998764 3333 589999999999875211 1111112344556666665554323458999999999999
Q ss_pred HHHHHhcc-------C-CCEEEEeCCCCcChhhHHHh-cC------------cEEEEeccCCC--C--CCCC--------
Q 015890 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCSS--K--TLHP-------- 150 (398)
Q Consensus 104 ~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~--~--~~~~-------- 150 (398)
.+++.... + ..+|+....+|++....+-. .| ..+..+ |... . .+..
T Consensus 121 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 199 (442)
T PRK13360 121 TALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHL-PHTLDLARNAFSKGQPEHGAE 199 (442)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEe-CCCchhhccccCCChHHHHHH
Confidence 99987541 2 25899999999987543211 11 011222 2111 0 0111
Q ss_pred ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
.++.+++.+.. ...+.+|+++..+...|.+ .+++.+++|.++|++||+++|+||++ ++..|........+....+
T Consensus 200 ~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi 279 (442)
T PRK13360 200 LADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDL 279 (442)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCce
Confidence 14577777751 2336788888777777886 57788999999999999999999999 6555544322222222223
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
.+++|.++ .| +++|.++++ +++.+.+... ....+++.++...+++.+.|+...+ +...++.+++.+
T Consensus 280 vt~gK~l~-gG~~P~gav~~~---~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~ 353 (442)
T PRK13360 280 LTCAKGLT-NGAIPMGAVFVS---SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLAP 353 (442)
T ss_pred eeeeeccc-cCccceEEEEEc---HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 48899997 56 789999988 7777766431 2335677888888888888875221 123334444444
Q ss_pred HHHHHhcc---CCCCccccCCccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 298 IIREALSP---LGEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 298 ~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
++.+.|++ .+.+.-+... |.+..+.+... .....++...++ ++||++.+. .+.+||++.. .++++
T Consensus 354 ~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lr~~Ppl~~t~~e 426 (442)
T PRK13360 354 YWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCF-EKGLMIRYT-----GDILALSPPLIIEEAQ 426 (442)
T ss_pred HHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCccCHHH
Confidence 44444443 3322222333 44444444211 112345666665 789999763 3579999777 79999
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLEEL 384 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~ 384 (398)
+++++++|.++++++
T Consensus 427 id~~~~~l~~~l~~~ 441 (442)
T PRK13360 427 IDELFDILAQALKET 441 (442)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999764
No 279
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=3.6e-21 Score=182.11 Aligned_cols=339 Identities=14% Similarity=0.102 Sum_probs=215.7
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|.. .++ .+|++.+++.+++.+... +.......+....+++.+....+.. .+.+++++++++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~ 128 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESN 128 (441)
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 46888999988743 333 589999999999876321 1111112344566777766554322 36899999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCC-C--CC-C--------ChHH
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSK-T--LH-P--------DADW 154 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~--~~-~--------d~e~ 154 (398)
+.+++... ....+|+....+|+++...+-.. +. .+..+ +.+.. . +. - .++.
T Consensus 129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (441)
T PRK05769 129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHV-PYPNPYRNPWGIENPEECGNAVLDF 207 (441)
T ss_pred HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEe-CCCccccccccCCchHHHHHHHHHH
Confidence 99998754 23368999999999977543222 11 11222 21110 0 00 0 1234
Q ss_pred HHH-hhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEE
Q 015890 155 LEK-TLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNL 225 (398)
Q Consensus 155 l~~-~l~---~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~ 225 (398)
+++ .++ ....+++|+++..+...|.+ .+++++++|.++|++||+++|+||++ ++..|........+ .+++
T Consensus 208 le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv- 286 (441)
T PRK05769 208 IEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII- 286 (441)
T ss_pred HHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE-
Confidence 555 332 12347888888777777885 56788999999999999999999999 65555332211111 1233
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc-
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS- 304 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~- 304 (398)
+++|.++ .|+++|+++++ +++.+.. ......+++.++..++++.+.|+...+ +..++.+++.+++++.|+
T Consensus 287 -t~~K~l~-~G~p~gav~~~---~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~ 357 (441)
T PRK05769 287 -TLAKAIA-GGLPLGAVIGR---AELMFLP-PGSHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKE 357 (441)
T ss_pred -EEccccc-CCcccEEEEEe---hhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 5789998 78999999988 5665432 222344666788899888888875222 334445555555555443
Q ss_pred ---cCCCCccccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHH
Q 015890 305 ---PLGEGAVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 375 (398)
Q Consensus 305 ---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 375 (398)
+++.+.-.... |.++.+.+..... ....+...++ ++||++.+. ..+.+|+++.. .+++|++++++
T Consensus 358 l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~----~~~~lr~~p~l~~t~~~id~~~~ 431 (441)
T PRK05769 358 LKEKYEFIGDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGA----GKSAIRIIPPLIITEEEADIGLE 431 (441)
T ss_pred HHHhCCCeeeeecc-eEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecC----CCCEEEEeCCCCCCHHHHHHHHH
Confidence 34443333344 5666666632110 1234555554 799999763 24689999887 79999999999
Q ss_pred HHHHHHHHH
Q 015890 376 RLRRGLEEL 384 (398)
Q Consensus 376 ~l~~~~~~~ 384 (398)
++.+++.++
T Consensus 432 ~l~~~l~~~ 440 (441)
T PRK05769 432 ILEEAIKEL 440 (441)
T ss_pred HHHHHHHHh
Confidence 999998764
No 280
>PRK02769 histidine decarboxylase; Provisional
Probab=99.91 E-value=7.5e-21 Score=175.71 Aligned_cols=289 Identities=10% Similarity=0.043 Sum_probs=209.5
Q ss_pred CcHHHHHHHHHHHhhhcCCCCCcE--EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 144 (398)
...++.+.+.+++.+.++.+++++ ++|+|+|+++..++.... .+++.|+++...|++....++.+|.+...+ +.+
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V-~~~ 140 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVI-TSL 140 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCcee-ccC
Confidence 356788888888888889876654 889999999987766543 467899999999999999999999888878 766
Q ss_pred CCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC---CEEEEeece-e---ccCCC--cc
Q 015890 145 SKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG---SWLVVDNTY-F---MYDGR--KH 214 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~---~~livDe~~-~---~~~~~--~~ 214 (398)
++ +.+|++.|++.+++. ..+.+|+++.++|+||.+.| +++|+++|+++| +++++|.++ . ++... +.
T Consensus 141 ~~-g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 141 PN-GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred CC-CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence 54 468999999999864 12588999999999999999 999999999998 699999999 2 22111 11
Q ss_pred ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCCCcchHHHHHHHHHhcC-CchHHH
Q 015890 215 CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPICASIISQHLALYSLQT-GPEWVT 286 (398)
Q Consensus 215 ~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~-~~~~~~ 286 (398)
... .+.+.++.|.||+++ ....+|.++.+ ++..+.+.... .....+.+.....++.++|+. +...++
T Consensus 217 d~~-~~vDsis~s~HK~~~-~P~g~G~l~~r---~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~ 291 (380)
T PRK02769 217 SFA-DGIDSIAISGHKFIG-SPMPCGIVLAK---KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLR 291 (380)
T ss_pred Ccc-CCCCEEEECCcccCC-CCCCcEEEEEe---hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHH
Confidence 111 234577889999986 34558998888 44544442111 112234455556666666665 456678
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 287 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+..++..++.+++.+.|++.+. .+...+..+.+.++.+. .+ +. +|..+.+. .+.+|+++.. .
T Consensus 292 ~~~~~~~~la~~l~~~L~~~g~-~~~~~p~~~~v~f~~~~-----~~----~~--~~w~l~~~-----~~~~hi~~~~~~ 354 (380)
T PRK02769 292 QRVQHCLDMAQYAVDRLQANGI-PAWRNPNSITVVFPCPS-----ER----IW--KKWHLATS-----GNQAHIITMPHH 354 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-EEEcCCCceEEEEcCCC-----HH----HH--hCeeEccc-----CCEEEEEECCCC
Confidence 8899999999999999988766 44444447767665442 12 22 45555542 3589999887 6
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015890 366 VEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~ 384 (398)
+.+.++++++.|.+.+...
T Consensus 355 ~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 355 NKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 8888999999988877644
No 281
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=3e-21 Score=183.40 Aligned_cols=345 Identities=11% Similarity=0.069 Sum_probs=219.2
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... ........+.+..+++.+.+..+...+.+++++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 130 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVE 130 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4588999998764 2332 589999999999876211 1111112344556666666555433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-----CCCC------CC
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-----KTLH------PD 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-----~~~~------~d 151 (398)
.+++.... +| .+|+....+|++....+-..+. .+..+ |.+. .+.. -+
T Consensus 131 ~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~-p~p~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06916 131 IAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKM-PYPYTYRSPYGNDKAEIVKKH 209 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence 99997652 33 6899999999996644332211 11112 1110 0000 13
Q ss_pred hHHHHHhhc-cCCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.++ ....+++|+++. .+...|.+ ++++.++++.++|+++|+++|+||++ ++..|........+....+.
T Consensus 210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv 289 (460)
T PRK06916 210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM 289 (460)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee
Confidence 556677775 223478899886 47777875 68889999999999999999999999 65555433222222222234
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 296 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 296 (398)
+++|.++ .| +++|.++++ +++.+.+.. .....+++.++...+++.+.|+.. .+.+++..+.-...+
T Consensus 290 ~~gK~l~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~ 365 (460)
T PRK06916 290 TAGKGLT-GGYLPIAITVTT---DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVA 365 (460)
T ss_pred eeehhhh-cCccccceeeec---HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 7799997 78 599999999 777776542 223446777899988888888752 123333333333333
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+.+.+. .+.+.+.-+... |.++.+.+.+... + ...++..++ ++||++.+. .+.+|+.++. .
T Consensus 366 ~~l~~l-~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~l~~~Ppl~i 437 (460)
T PRK06916 366 TQLEDL-FALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL-----GNTIVFMPPLAS 437 (460)
T ss_pred HHHHHh-hcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccc
Confidence 444332 234433334445 5555555532110 0 134556554 899999874 2578998666 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++|+++++++|.++++++..
T Consensus 438 t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 438 TIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred CHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999987654
No 282
>PRK05939 hypothetical protein; Provisional
Probab=99.90 E-value=5.7e-21 Score=178.09 Aligned_cols=278 Identities=21% Similarity=0.169 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCC
Q 015890 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTL 148 (398)
Q Consensus 72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~ 148 (398)
.+++.++++. +. +..++++++++|+..++.+++++||+|+++.+.|++.. ..++..|++++.+ +.
T Consensus 51 ~lE~~la~le----g~--~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v-~~----- 118 (397)
T PRK05939 51 ALEAKITKME----GG--VGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV-DA----- 118 (397)
T ss_pred HHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE-CC-----
Confidence 5666666554 43 23455666789999999999999999999999997643 3466789999888 54
Q ss_pred CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcc
Q 015890 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s 227 (398)
.|++++++.+++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++| .+.. ......+.++++.|
T Consensus 119 -~d~e~l~~~l~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~---~~~~~~gaDivv~S 189 (397)
T PRK05939 119 -TDVQNVAAAIRPNT--RMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWL---FRPKDVGASLVINS 189 (397)
T ss_pred -CCHHHHHHhCCCCC--eEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccc---cCccccCCEEEEec
Confidence 27899999998765 99999999999999977 999999999999999999998 3321 11222346799999
Q ss_pred cccccCCCcceeEEEEccCCcHH------H-------------HHHHHH-hhccCCCCcchHHHHHHHHHhcCCchHHHH
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEG------F-------------ATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTE 287 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~------~-------------~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (398)
++|.++..|.++|+++..+.... + +..+.. ........+++...+.+...++. +..
T Consensus 190 ~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t----l~~ 265 (397)
T PRK05939 190 LSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET----LAL 265 (397)
T ss_pred CeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc----HHH
Confidence 99999878999999776421000 1 111111 11122344555555444444443 667
Q ss_pred HHHHHHHHHHHHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---e
Q 015890 288 RVKDLVRNREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---I 347 (398)
Q Consensus 288 ~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~ 347 (398)
+.+++.+++..+.+.|+++|.+. |..| ..|..+.+++.. .. ...++++.-.+.. .
T Consensus 266 R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~----~~-~~~~f~~~l~l~~~~~s 340 (397)
T PRK05939 266 RVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD----GI-DCFDFLNRLKLVIKATH 340 (397)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC----HH-HHHHHHHhCCcceEccC
Confidence 77777788899999999877532 2221 124455666652 11 2223443334321 1
Q ss_pred cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 348 PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 348 ~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
-|... + .++.||+|++- |+.+.+++.|.+++.
T Consensus 341 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 341 LGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALD 395 (397)
T ss_pred CCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHh
Confidence 11100 0 13579999997 677788888888875
No 283
>PRK07480 putative aminotransferase; Validated
Probab=99.90 E-value=4e-21 Score=182.16 Aligned_cols=346 Identities=13% Similarity=0.061 Sum_probs=221.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.... ........+.+..+++.+....+...+.+++++++++|++
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYY-NTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND 125 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 4688999998764 3333 5899999999998763211 0011122345566666666555433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcC-cE------------EEEeccCCC-CC--CCCC--------
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG-VT------------HILVGPCSS-KT--LHPD-------- 151 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g-~~------------~~~~~~~~~-~~--~~~d-------- 151 (398)
.+++.... +| .+|+....+|++........+ .. +..+ +.+. .. +..+
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 204 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHI-DQPYWFGEGGDMTPEEFGLAA 204 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeec-CCCcccccccCCChHHHHHHH
Confidence 99987642 33 478999999988654322221 10 1111 1100 00 0001
Q ss_pred hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
++.+++.+. ....+++|+++..+...|.+ .|++.++++.++|++||+++|+||++ |+..|........+....+.
T Consensus 205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 284 (456)
T PRK07480 205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLM 284 (456)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCee
Confidence 256665553 22347889998777777875 67778999999999999999999999 66556433222222223345
Q ss_pred ccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCCCcchHHHHHHHHHhcCCc--hHHHHH-HHHHHHHHHH
Q 015890 227 SFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGP--EWVTER-VKDLVRNREI 298 (398)
Q Consensus 227 s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~ 298 (398)
+++|.++ .|+ ++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+..+ +.+.+. .+.-...++.
T Consensus 285 ~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~ 360 (456)
T PRK07480 285 TIAKGLT-SGYIPMGAVGVG---DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKR 360 (456)
T ss_pred eeehhhc-cCCccceEEEEc---HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7799997 674 89999998 778776631 2244578889999999999997522 233333 2334444555
Q ss_pred HHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE 367 (398)
Q Consensus 299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~ 367 (398)
+.+ +.+++.+..+... |.++.+.+.+... + ...+...+ .++||.+.+. .+.+|+++.. .++
T Consensus 361 l~~-l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-----~~~l~~~Ppl~it~ 432 (456)
T PRK07480 361 LRE-LADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHC-FANGLIMRAV-----GDRMIISPPLVITH 432 (456)
T ss_pred HHH-hhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHH-HHCCcEEeec-----CCEEEEECCCCCCH
Confidence 555 4555544444455 5666666632110 1 12344444 4899999762 2579999887 799
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015890 368 DDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++++++|.+++.++.+
T Consensus 433 ~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 433 AEIDELVEKARKALDATAA 451 (456)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998755
No 284
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=4.7e-21 Score=181.91 Aligned_cols=347 Identities=14% Similarity=0.133 Sum_probs=220.2
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---CcEEEe-cChH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVT-AGAN 99 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---~~v~~~-~g~t 99 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+..... ......+.+..+++.+....+..- +.++++ ++++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS 137 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH--TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT 137 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc--ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence 4588999998764 3333 58999999999986422111 111123444455555554332111 246565 6889
Q ss_pred HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCC-C--C--------CCChH
Q 015890 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-T--L--------HPDAD 153 (398)
Q Consensus 100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~--~--------~~d~e 153 (398)
+|++.+++... ....+|+....+|+++...+... |. .+..+ +.+.. . + ..+++
T Consensus 138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFL-PYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEe-CCCccccccccCchhhHHHHHHH
Confidence 99999999764 22368999999999976544331 10 11222 22110 0 0 01256
Q ss_pred HHHHhhccC----CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 154 WLEKTLETK----PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 154 ~l~~~l~~~----~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
.+++.++.. ..+++|+++..+...|.+ .|++.++++.++|++||+++|.||++ |+..|........+....+-
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv 296 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV 296 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE
Confidence 777777631 237889888767777875 56889999999999999999999999 66555433222222223344
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhc
Q 015890 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALS 304 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~ 304 (398)
+++|.+| .|+++|.++.+ +++ +.+.......+++.++.+.+++.+.|+... +..++..+.-.+.++.+.+..+
T Consensus 297 ~~gKglg-gG~PlsAv~~~---~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~ 371 (464)
T PRK06938 297 VLSKAIG-GSLPLAVVVYR---EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQR 371 (464)
T ss_pred Eeecccc-CCCceEEEeeh---hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789998 78999999988 453 444333345677889999999999987522 2333333333444555555445
Q ss_pred cCCCCccccCCccEEEEeeCCCCCC----------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890 305 PLGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC 370 (398)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~ 370 (398)
+++.+.-+... |.++.+.+..... + ...++..++ ++|+.+.++.. ..+.||+.+.. .+++++
T Consensus 372 ~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~--~~~~l~~~Ppl~it~~ei 447 (464)
T PRK06938 372 DYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR--HGSVVRFLPPLIITAEQI 447 (464)
T ss_pred hCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCccCHHHH
Confidence 56654445555 6667777632110 0 234555554 89999977421 24689998666 799999
Q ss_pred HHHHHHHHHHHHHHh
Q 015890 371 KAAADRLRRGLEELV 385 (398)
Q Consensus 371 ~~~~~~l~~~~~~~~ 385 (398)
+++++++.+++.++.
T Consensus 448 d~~~~~l~~~l~~~~ 462 (464)
T PRK06938 448 DEVAEIFAEAVAAAV 462 (464)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 285
>PRK07481 hypothetical protein; Provisional
Probab=99.90 E-value=6.6e-21 Score=180.72 Aligned_cols=346 Identities=14% Similarity=0.075 Sum_probs=220.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+...... ......+.+..+++.+.+..+ ...+.+++++++++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAv 117 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSV 117 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec-ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHH
Confidence 4689999998763 3343 579999999999876321110 001123455566666665542 1235799999999999
Q ss_pred HHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-C--CCC-CChHH---
Q 015890 103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-K--TLH-PDADW--- 154 (398)
Q Consensus 103 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-~--~~~-~d~e~--- 154 (398)
+.+++.... +| .+|+....+|++....+...+. .+..+ +.+. . .+. .|.+.
T Consensus 118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~d~~~~~~ 196 (449)
T PRK07481 118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHV-ETPWLYRNPFTEQDPEELAR 196 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEe-CCCcccccccCCCCHHHHHH
Confidence 999997642 23 5799999999997653322211 11112 1110 0 011 13333
Q ss_pred -----HHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890 155 -----LEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 155 -----l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~ 224 (398)
+++.+. ....+++|+++..+...|.+ .+++.++++.++|++||+++|.||++ |+..|........+....
T Consensus 197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD 276 (449)
T PRK07481 197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD 276 (449)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC
Confidence 344443 22347899999777777875 57788999999999999999999999 655554322222222222
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHH
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR 294 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~ 294 (398)
+-+++|.++ .| +++|.++++ +++.+.+... ....+++.++.+.+++.+.|+... +.+++..+.-..
T Consensus 277 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~ 352 (449)
T PRK07481 277 IMCLAKGIT-SGYVPLGATMVN---ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAY 352 (449)
T ss_pred EEEEeeccc-CCCcCceEEEEc---HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 446789997 67 589999999 7787776531 234567788999999999887522 233444444444
Q ss_pred HHHHHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890 295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 364 (398)
.++.+.+..++.+.+.-+... |.++.+.+.... . ....+...+ .++||++.+.. +.+|++...
T Consensus 353 l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~g-----~~i~l~Ppl 425 (449)
T PRK07481 353 LLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVA-RENGVLVRPSG-----TKIILSPPL 425 (449)
T ss_pred HHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHH-HhCCeEEEecC-----CEEEEECCC
Confidence 455555544445544444455 566666663211 0 123455555 48999998742 358999776
Q ss_pred -CCHHHHHHHHHHHHHHHHHHh
Q 015890 365 -LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+++|+++++++|.++++++.
T Consensus 426 ~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 426 VIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CCCHHHHHHHHHHHHHHHHhcc
Confidence 699999999999999998753
No 286
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=6e-21 Score=177.24 Aligned_cols=278 Identities=17% Similarity=0.144 Sum_probs=181.8
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS 145 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~ 145 (398)
...+++.++++. |. +..+++++++.|+..++ .++++||+|+++.+.|.+.. ..++..|+++..+ +.
T Consensus 52 ~~~Le~~la~l~----g~--~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v-d~-- 121 (380)
T PRK06176 52 RFALEELIADLE----GG--VKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII-DT-- 121 (380)
T ss_pred HHHHHHHHHHHh----CC--CCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc-CC--
Confidence 455555555554 53 23455666678998766 56799999999999997543 3456678888877 43
Q ss_pred CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
.|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++| ..+...+. ..+.+++
T Consensus 122 ----~d~e~l~~ai~~~t--~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~p~---~~gaDiv 189 (380)
T PRK06176 122 ----SDLSQIKKAIKPNT--KALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQNPL---LLGADIV 189 (380)
T ss_pred ----CCHHHHHHhcCcCc--eEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCCcc---ccCCCEE
Confidence 27899999998765 99999999999999999 899999999999999999999 43333222 2234588
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+.|++|.++.+| .-.|+++.++ +++.+++...+.......++...+.+...++ .+..+.+++.++..++.+.|
T Consensus 190 v~S~tK~l~g~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~----tl~~R~~~~~~~a~~la~~L 263 (380)
T PRK06176 190 VHSGTKYLGGHSDVVAGLVTTNN--EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK----TLGLRMEAHQKNALCVAEFL 263 (380)
T ss_pred EecCceeccCCccceeeEEEecH--HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHH
Confidence 999999997544 4467777764 5677777665554344444444443333332 24555566667777777777
Q ss_pred ccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----------
Q 015890 304 SPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----------- 352 (398)
Q Consensus 304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----------- 352 (398)
++.+.+ +++.| ..+..+.+++.. .+.+.+++++-.+.- .-|...
T Consensus 264 ~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 338 (380)
T PRK06176 264 EKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-----DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH 338 (380)
T ss_pred HhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-----HHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence 766542 12111 113445566642 123334444444322 111110
Q ss_pred -----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 353 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 353 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .++-||+|++- |+.+.+++.|.+++++
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 339 ACIPKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAK 378 (380)
T ss_pred ccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 13579999996 6777888888888865
No 287
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=1.7e-21 Score=181.70 Aligned_cols=324 Identities=13% Similarity=0.037 Sum_probs=214.7
Q ss_pred eEEcCCccCCCCCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEec-ChHHHHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTA-GANQAFVNIVLT 108 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~-v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~-g~t~a~~~~~~~ 108 (398)
.+.|+.| +..++|. |++++.+.+... .+.+....++.+...+.++++++.+ +++|++++ |+|.+++.++.+
T Consensus 13 ~~~f~~G--p~~~~~~~v~~a~~~~~~~~----~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~ 86 (378)
T PRK03080 13 DPRFSSG--PCKKRPGWQLEALADALLGR----SHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWS 86 (378)
T ss_pred CCCcCCC--CcCCChHHHHHHHHhhhccc----CcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHh
Confidence 3445555 4556777 999998765321 1223345566666666677777874 45788875 999999999999
Q ss_pred hccC-CCEEEEeCCCCcC-hhh-HHHhcCc-EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 109 LCDA-GDSVVMFAPYYFN-SYM-SFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 109 l~~~-gd~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
+.++ ++.|+. ...|.. +.. ..+.+|. ++..+ +.+ .+..+|+++++ . + ++|.+++..|.||..+|
T Consensus 87 l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~-~~~-~g~~~d~~~i~----~-~--~~V~~~h~~t~tG~~~p-- 154 (378)
T PRK03080 87 LLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVL-EAD-YGSLPDLSAVD----F-D--RDVVFTWNGTTTGVRVP-- 154 (378)
T ss_pred cCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEe-ccC-CCCCCCHhhcC----C-C--CCEEEEecCCccceecc--
Confidence 9874 344444 444432 333 2366788 88887 655 34456776633 2 3 67899999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---- 259 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---- 259 (398)
+++|++ +++|+++++|.++ ++........ .+++++|.+|+++. ...+|+++.+ ++.++++....
T Consensus 155 -i~~I~~--~~~g~~~vVDa~qs~G~~pidv~~----iD~~~~s~~K~l~~-P~G~g~l~v~---~~~~~~~~p~~~~~~ 223 (378)
T PRK03080 155 -VARWIG--ADREGLTICDATSAAFALPLDWSK----LDVYTFSWQKVLGG-EGGHGMAILS---PRAVERLESYTPARP 223 (378)
T ss_pred -chhhcc--ccCCCeEEEecccccccCCCCHHH----CcEEEEehhhhCCC-CCceEEEEEC---HHHHHhhhcccCCCC
Confidence 788877 7889999999999 6654333222 25889999999953 2347998888 67766654311
Q ss_pred -------------------ccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCcccc--C--
Q 015890 260 -------------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKG--G-- 314 (398)
Q Consensus 260 -------------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~-- 314 (398)
.....+++.....++..+|+...+ .++++.++.+++.+++++.|+++++..+.. +
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 303 (378)
T PRK03080 224 IPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPAT 303 (378)
T ss_pred CchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence 111234455555555556654222 367778888889999999999887645542 1
Q ss_pred CccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 315 EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 315 ~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
..+..+.+.++... ....++..+++ ++||.+..|......+.+|+|++. .+.+|+++++++|++++++..
T Consensus 304 ~s~~i~~~~~~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 304 RSNTSVTLDFVDAQAAVDAAAVAKLL-RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred cCccEEEEEcCCchHHHHHHHHHHHH-HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 12234555665300 01345666676 568888876543335789999988 899999999999999877643
No 288
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.90 E-value=2.7e-21 Score=178.43 Aligned_cols=317 Identities=13% Similarity=0.092 Sum_probs=222.3
Q ss_pred CCCCcHHHHHHHHHhhcC---CCCCCCCC---CCCcHHHHHHHHHHHhhhcCCC-CCc-EEEecChHHHHHHHHHHhccC
Q 015890 41 YWQPPKMAMEKVKELVWD---PSISKYGA---DEGLPELRDALVKKLNQENKLY-KSS-VMVTAGANQAFVNIVLTLCDA 112 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~---~~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~-~~~-v~~~~g~t~a~~~~~~~l~~~ 112 (398)
|...|++|++|+.+.+.+ ...+.+.. +..+.++.+.+.+.++++++.+ ... ++++++++.+++.++.+++.+
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~ 90 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGG 90 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCC
Confidence 666899999999988632 11222222 3333467777777777777863 334 555588899999999999999
Q ss_pred CCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH-hhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 113 GDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 113 gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~-~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
|+++++...+.++ +.+.++.+|.. ..+ ..+. .+. .+..++++ .++++ +++|.+++..+.||+..+ .+.+
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~-~~~~~~g~-~~~~~~~~~~l~~~--~~~V~~th~eTstGv~~~--~i~~ 163 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKKYGEV-NVA-ASSEDDGF-TYIPPLDEWQLSDD--AAYVHYTSNETIDGTEFH--ELPD 163 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHHhCCc-eEE-ecccccCC-CCCCChhhccCCCC--CCEEEEccCCCcceEecC--cccc
Confidence 9999988877765 55778888865 444 3332 343 34444444 67654 599999999999999983 1655
Q ss_pred HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH-h--------
Q 015890 189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-V-------- 258 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~-~-------- 258 (398)
| +|+++++|.++ ++....... ..+ ++++|.+|.+|++| +|.++++ +++++++.. .
T Consensus 164 i------~g~l~vVDavss~g~~~idv~--~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~l~~~~~~~~~~~~~~~ 228 (360)
T PRK05355 164 T------GDVPLVADMSSDILSRPIDVS--KFG--LIYAGAQKNIGPAG--LTIVIVR---EDLLGRALPSIPSMLDYKT 228 (360)
T ss_pred c------CCCcEEEEcCccccCccCCHH--Hcc--EEEEeccccccCCc--eEEEEEC---HHHHhhcccCCChHHHHHH
Confidence 5 79999999999 665433332 233 88899999998776 6888888 566655433 1
Q ss_pred ---hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCCCC
Q 015890 259 ---QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKHLD 330 (398)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 330 (398)
....++++|.....++.++|+... . .++++.++.+++.+++++.|++++......+ .....+.+.++.. ..
T Consensus 229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-~~ 307 (360)
T PRK05355 229 HADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE-EL 307 (360)
T ss_pred HHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh-HH
Confidence 112457888999999998888622 3 4788889999999999999999885332221 2224455666643 12
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
..++...+ .++|+.+.++.. ..+.+|+|+.. .+.+|++++++.|+++++.
T Consensus 308 ~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 308 DKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred HHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 34555555 478999866542 35789999988 8999999999999987653
No 289
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.90 E-value=3.4e-21 Score=176.98 Aligned_cols=323 Identities=11% Similarity=0.102 Sum_probs=214.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +.+. ...+.+..+++.+.+..+ .+.+++++++++|++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~SGseA~e 95 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWVN--YEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhcC--CCEEEEeCchHHHHH
Confidence 4789999998764 3343 579999999999876321 1111 123344555555554443 357999999999999
Q ss_pred HHHHHhc-cCC-CEEEEeCCCCcChhhHHHhc-C-------cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSFQMT-G-------VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 104 ~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~~~~-g-------~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
.+++... .+| ++|+....+|++....+-.. + ..+... ......+ .|.+.+++.+.++ +++|+++..
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~-~~~~~~~-~d~~~l~~~i~~~--~aAvivEpi 171 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVP-GFKHIPF-NDVEAAKEAITKE--TAAVIFEPI 171 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCC-CcEEecC-CCHHHHHHHhcCC--cEEEEEcCC
Confidence 9999874 344 79999999999876443321 1 111000 0111111 2678889888754 589999877
Q ss_pred CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 174 GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 174 ~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+...|.. .|++.++++.++|++||+++|.||++ + ..|........+....+-+++|.+| .|+++|.++.+. +
T Consensus 172 ~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lg-gG~P~~a~~~~~---~ 246 (364)
T PRK04013 172 QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIG-NGVPVSLTLTNF---D 246 (364)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEeccccc-CCceeEEEEecc---c
Confidence 7777774 57789999999999999999999999 5 5554322221222222446789998 789999998883 3
Q ss_pred HHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890 251 FATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 328 (398)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (398)
+ .......+++.++.+.+++.+.|+..+ +..++..+ .+. .+.. +.+.-+... |.++-+.+.+
T Consensus 247 ~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~-------~l~-~l~~-~~v~~vRG~-Gl~~gve~~~-- 310 (364)
T PRK04013 247 V----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGE-------KFI-EIKG-ERVVTTRGR-GLMIGIVLKK-- 310 (364)
T ss_pred c----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHH-------HHH-Hhcc-CcceeeeeC-cEEEEEEeCC--
Confidence 3 122345678889999999999887522 22222221 122 2222 333334455 7777788853
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
....+...++ ++|+.+.+. ..+.+|+.+.. .+++++++++++|.++++++.
T Consensus 311 -~~~~i~~~~~-~~Gll~~~~----g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 311 -PVGKYVEELQ-NRGYLVHTA----GQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred -cHHHHHHHHH-hCCcEEeeC----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 2445666664 899999764 24789999887 799999999999999998754
No 290
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=7.9e-21 Score=178.59 Aligned_cols=338 Identities=13% Similarity=0.058 Sum_probs=214.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.....+. ....+....+++.+.+..+...+.+++++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 114 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG--GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVE 114 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC--CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence 4689999998764 3333 5899999999998763211111 111234455666665544333468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCC-CCCC-C----hHHH
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSK-TLHP-D----ADWL 155 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~~~~-d----~e~l 155 (398)
.+++.... ++ .+|+....+|++....+-.. +. ....+ |.+.. +... + .+.+
T Consensus 115 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~ 193 (422)
T PRK05630 115 VAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFA-PAPPVRGSSPQEISEYLRSL 193 (422)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEc-CCCcccCCChHHHHHHHHHH
Confidence 99997542 23 57999999999865433221 10 11222 22111 1000 1 2344
Q ss_pred HHhhccCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890 156 EKTLETKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~ 231 (398)
++.+.+ .+.+|+++.. +...|.. .+++.++++.++|++||+++|+||++ ++..|........+....+.+++|.
T Consensus 194 ~~~~~~--~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~ 271 (422)
T PRK05630 194 ELLIDE--TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKA 271 (422)
T ss_pred HHHHhh--ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeech
Confidence 555543 3688998863 7777874 57789999999999999999999999 5555543222212222223378999
Q ss_pred cCCCc-ceeEEEEccCCcHHHHHHHHHh------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890 232 YGMMG-WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304 (398)
Q Consensus 232 ~~~~G-~r~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 304 (398)
++ .| ..+|+++++ +++.+.+... ....+++.++...+++.++|+...+ +...++..++.+++.+.|+
T Consensus 272 l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~L~ 345 (422)
T PRK05630 272 LT-GGFMSFAATLCT---DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAGLS 345 (422)
T ss_pred hh-cCccccceeecc---HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHH
Confidence 96 67 479999999 7777766421 2345778889999988888875221 1122233344444444333
Q ss_pred ---cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 305 ---PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 305 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.+.+.-+... |.++.+.+.... +...+...++ ++|+++.+. .+.+|+.+.. .+++++++++++|.++
T Consensus 346 ~l~~~~~v~~vRg~-Gl~~~ie~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~~a 417 (422)
T PRK05630 346 PLAHLPGVADVRVL-GAIGVVEMEQPV-DMEEATQAAV-DHGVWLRPF-----GRLVYVMPPYITTSEQIAQICAALAAA 417 (422)
T ss_pred HhhcCCCeeeeecc-ccEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 33332323344 677777775321 3456666654 899999763 2689999877 7999999999999999
Q ss_pred HHH
Q 015890 381 LEE 383 (398)
Q Consensus 381 ~~~ 383 (398)
+++
T Consensus 418 l~~ 420 (422)
T PRK05630 418 VKA 420 (422)
T ss_pred Hhc
Confidence 865
No 291
>PRK07046 aminotransferase; Validated
Probab=99.90 E-value=2e-20 Score=177.12 Aligned_cols=335 Identities=13% Similarity=0.064 Sum_probs=219.5
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|.. .++ .+|.+.+++.+++.+.....+ + .+....+++.+.+..+ .+.+.+++++|+|+.
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~-~----~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e 144 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML-P----SEDAAWVGEELARRFG--LPYWQVATTATDANR 144 (453)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHHhC--CCEEEEECCHHHHHH
Confidence 35788999976642 233 579999999999987433222 2 3445556666665544 568999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHH-h-cCcEE----------EEe-ccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-M-TGVTH----------ILV-GPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~-~g~~~----------~~~-~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
.+++... ...++|+....+|+++....- . .+... ..+ .+.....+ -|++.+++.+..+ .+++|
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~-~vAav 222 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADG-DVAAV 222 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCC-CeEEE
Confidence 9999864 233789999999999853221 1 00000 000 00000011 2789999988643 37888
Q ss_pred EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
+++..+...|.+ .+++.++++.++|++||+++|+||++ | ++.+... ..+....+.+++|.+| .|+++|.+++
T Consensus 223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~---~~gv~PDi~t~gK~lg-gG~Pi~av~g 298 (453)
T PRK07046 223 LAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTR---AHGLEPDFLVVGKPIA-GGVPCAVYGF 298 (453)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhH---HhCCCccceeehhhhc-CCCcceeeee
Confidence 888666666765 56678999999999999999999999 3 3333211 1122233447899998 7899999999
Q ss_pred cCCcHHHHHHHHHh---------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 245 PSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 245 ~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
+ +++.+.+... ....+++.++...+++.+.|+. ..+.+++..+...+.++.+.+.+++.+....+.
T Consensus 299 ~---~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~ 375 (453)
T PRK07046 299 S---AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVT 375 (453)
T ss_pred h---HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 8 7888777531 1234677889999999998874 224455555555666667776666666533343
Q ss_pred CCccEEEEeeCCC-CCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPE-KHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 314 ~~~~~~~~~~~~~-~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
..+.. +.+.+.. ... + ...++..++ ++||++.+. .+.++++.. .+++|++++++++.++
T Consensus 376 g~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~~~~~p~-~t~~did~~~~~~~~~ 447 (453)
T PRK07046 376 RVGAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRGVLITPF-----HNMMLVCPA-TTAADVDRLVAAFDAC 447 (453)
T ss_pred EeCcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCCCEEecc-----cCcEEEeCC-CCHHHHHHHHHHHHHH
Confidence 44333 3333311 110 1 123445554 789999763 246788877 5999999999999999
Q ss_pred HHHHh
Q 015890 381 LEELV 385 (398)
Q Consensus 381 ~~~~~ 385 (398)
++++.
T Consensus 448 l~~~~ 452 (453)
T PRK07046 448 LGELL 452 (453)
T ss_pred HHHHh
Confidence 98764
No 292
>PLN02271 serine hydroxymethyltransferase
Probab=99.90 E-value=1.8e-20 Score=175.09 Aligned_cols=356 Identities=14% Similarity=0.065 Sum_probs=243.1
Q ss_pred hccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhc
Q 015890 12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~ 85 (398)
...+...+.-+.+.....++-++|--..|. .++.+++++...+.+.-.-+| +-.....+++....+..++.+
T Consensus 130 ~~~Dpei~~li~~E~~rQ~~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF 207 (586)
T PLN02271 130 PEADPDIHELMEKEKQRQFKGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAF 207 (586)
T ss_pred hhhCHHHHHHHHHHHHHHhcCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHh
Confidence 344555555566655556788888877666 479999988777755222222 223444566666667777778
Q ss_pred CCCC----CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---------HhcC--cEEEEeccCCCCCCCC
Q 015890 86 KLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---------QMTG--VTHILVGPCSSKTLHP 150 (398)
Q Consensus 86 ~~~~----~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---------~~~g--~~~~~~~~~~~~~~~~ 150 (398)
+.+. -||... |++.|+.+++.++++|||+|+..+..|.++.... ...| ++.+++ +.+++...+
T Consensus 208 ~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY-~~d~~~g~I 285 (586)
T PLN02271 208 GLDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPY-KVNPQTGYI 285 (586)
T ss_pred CCcccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEc-ccccccCcc
Confidence 8765 566666 5669999999999999999999888887655422 3345 355555 676666679
Q ss_pred ChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEc
Q 015890 151 DADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLF 226 (398)
Q Consensus 151 d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~ 226 (398)
|.|++++... .+ ||+|++....+| ..+| ++++.++|+++|+++++|.+| .+.- +....+..+ .+++++
T Consensus 286 Dyd~lek~a~~~r--PKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-aDvvt~ 357 (586)
T PLN02271 286 DYDKLEEKALDFR--PKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-CDIVTS 357 (586)
T ss_pred CHHHHHHHhhhcC--CeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-CcEEEe
Confidence 9999999554 44 599999877777 6677 889999999999999999999 4432 222222222 458899
Q ss_pred ccccccCCCcceeEEEEccCCc-----------------HHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHH
Q 015890 227 SFSKAYGMMGWRVGYIAYPSEV-----------------EGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTE 287 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~~~~-----------------~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~ 287 (398)
|.+|++ .|.|.|.+..+++. +++.+++.... .....++....+++.+.++.. ....+.+
T Consensus 358 TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~ 435 (586)
T PLN02271 358 TTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKA 435 (586)
T ss_pred CCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHH
Confidence 999998 46667888876421 13455554332 222333344445565666654 2344589
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEe
Q 015890 288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISF 362 (398)
Q Consensus 288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~ 362 (398)
+.+++.++++.|.+.|.+.|...+.+......+++++.....+. ..++++|++.||.+.--..++ .++.|||+.
T Consensus 436 Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G-~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT 514 (586)
T PLN02271 436 YMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTG-KNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGT 514 (586)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCH-HHHHHHHHHcCeEeccccCCCCCCCCCCCcccccC
Confidence 99999999999999999888844555555677888886544344 455556688999995443322 357899984
Q ss_pred cC-----CCHHHHHHHHHHHHHHHH
Q 015890 363 GG-----LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 363 ~~-----~~~~~~~~~~~~l~~~~~ 382 (398)
.. ..++|+++..+.|.++++
T Consensus 515 ~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 515 PAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 33 466888988888888876
No 293
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.90 E-value=1.5e-20 Score=159.14 Aligned_cols=323 Identities=14% Similarity=0.103 Sum_probs=237.4
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCC
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p 121 (398)
..++.+.+|+... ..+| .++....+.+.+.+-++..+... ..-+++..+++.+++.++..++.|||+|++...
T Consensus 27 nl~~~V~~A~~~~-----~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~ 100 (385)
T KOG2862|consen 27 NLSGRVQEAMSRP-----SLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVST 100 (385)
T ss_pred CCCHHHHHhhcCC-----cccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEe
Confidence 3466666666443 2334 45555666666666666666543 456888888999999999999999999999877
Q ss_pred CCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
+-++ +.+.++.+|+++..+ +.+. |....+|.+++++..++ +++|++++..+.||+..+. ++.+.++|++|+++
T Consensus 101 G~wg~ra~D~~~r~ga~V~~v-~~~~-G~~~~le~i~~~lsqh~-p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~l 175 (385)
T KOG2862|consen 101 GTWGQRAADCARRYGAEVDVV-EADI-GQAVPLEEITEKLSQHK-PKAVFVTHGDSSTGVLQDL--LAISGELCHKHEAL 175 (385)
T ss_pred chHHHHHHHHHHhhCceeeEE-ecCc-ccCccHHHHHHHHHhcC-CceEEEEecCccccccchH--HHHHHHHhhcCCeE
Confidence 7755 567889999999988 6653 45689999999999876 8999999999999999873 56667789999999
Q ss_pred EEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhh------------------
Q 015890 200 LVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQ------------------ 259 (398)
Q Consensus 200 livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~------------------ 259 (398)
++||.+. ++ +.++..+.++.++......|++|. +|+ +-+..+ +...++++.-+
T Consensus 176 llVD~VaSlg--gt~F~mDewgVDvaytgSQKaL~aP~GL--siisfS---~ka~~~~~~rK~~~~~~yFd~~~~~~~wg 248 (385)
T KOG2862|consen 176 LLVDTVASLG--GTEFEMDEWGVDVAYTGSQKALGAPAGL--SIISFS---DKALEAIRDRKTKPVSFYFDILRLGNFWG 248 (385)
T ss_pred EEEechhhcC--CccceehhhcccEEEecchhhcCCCCCc--ceeecC---HHHHHHHhhccCCceEEEEeHHhhcchhc
Confidence 9999887 44 344555556666777777899974 443 557777 55555554321
Q ss_pred -----ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc---CCccEEEEeeCCCCCCC
Q 015890 260 -----DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG---GEGAIYLWARLPEKHLD 330 (398)
Q Consensus 260 -----~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 330 (398)
..+..+++.-....+.++|.. .++.+++..+++++..+.++..|+++|..-+.. ....-.-.+.+|.. .|
T Consensus 249 c~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~g-vD 327 (385)
T KOG2862|consen 249 CDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYG-VD 327 (385)
T ss_pred cCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCC-CC
Confidence 134456777778888888875 346789999999999999999999887622221 11122334555554 48
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
-.+++.++...+++.+..|-....+..+||++.. -+.+.+++.++.|+.++++-
T Consensus 328 w~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 328 WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred HHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 8899999987778888777666677899999655 47788999999999888763
No 294
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.90 E-value=8.7e-21 Score=179.50 Aligned_cols=342 Identities=14% Similarity=0.088 Sum_probs=217.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.. .++......+....+++.+.+..+...+.|++++++++|++
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve 123 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLD--YAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVD 123 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4689999998764 3333 58999999999987621 11111112334455666666554433468999999999999
Q ss_pred HHHHHhcc-------C-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC--C--CCCC--------
Q 015890 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS--K--TLHP-------- 150 (398)
Q Consensus 104 ~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~--~~~~-------- 150 (398)
.+++.... + ..+|+....+|++....+-..+. .+..+ +.+. . .+..
T Consensus 124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 202 (445)
T PRK09221 124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHL-PHTLDLPENAFSKGQPEHGAE 202 (445)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEe-CCCccccccccCCChHHHHHH
Confidence 99987541 1 25899999999987543221110 11122 1110 0 0000
Q ss_pred ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
.++++++.++. ...+++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|........+....+
T Consensus 203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE
Confidence 13567777752 1347889998778778885 56778999999999999999999999 6655543322211111124
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
.+++|.++ .| +++|.++++ +++.+.+.. .....+++.++...+++.+.|+...+ +...++.+++.+
T Consensus 283 ~~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~ 356 (445)
T PRK09221 283 ITFAKGLT-NGAIPMGAVIAS---DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--EDLFERAAELAP 356 (445)
T ss_pred EEeccccc-cCcccceeeEEc---HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 47899997 55 689999888 777776642 12234677788888888888875211 123444555555
Q ss_pred HHHHHhccC---CCCccccCCccEEEEeeCCCCC----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 298 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 298 ~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
++++.|+++ +.+.-+... |.+..+.+.... .....+.+.++ ++||.+.++ .+.+|+++.. .++++
T Consensus 357 ~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~lr~~Ppl~~t~~e 429 (445)
T PRK09221 357 YFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCF-EKGLLVRYT-----GDTIALSPPLIIEKAQ 429 (445)
T ss_pred HHHHHHHhhccCCCEEEEecC-ceEEEEEEecccccccchHHHHHHHHH-HCCeEEeec-----CCEEEEECCccCCHHH
Confidence 555555443 322223334 455555553211 12345666665 889999763 3579999777 79999
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLEEL 384 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~ 384 (398)
+++++++|.+++.++
T Consensus 430 id~~~~~l~~~l~~~ 444 (445)
T PRK09221 430 IDELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999764
No 295
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.90 E-value=9.9e-21 Score=179.35 Aligned_cols=338 Identities=17% Similarity=0.122 Sum_probs=210.3
Q ss_pred HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|... ++ .+|++.+++.+++.+... +.. ..+.+..+++.+.+..+. .+.+.+++++++|+.
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e 169 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACM 169 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHH
Confidence 357889999876532 33 589999999999987432 221 234556667777665432 478999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc---CcEEE------EeccC--CC----CCCCCChHHHHHhhcc-CCCC
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT---GVTHI------LVGPC--SS----KTLHPDADWLEKTLET-KPTP 165 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~------~~~~~--~~----~~~~~d~e~l~~~l~~-~~~~ 165 (398)
.+++... ....+|+....+|+++...+... +.... .+ +. .. ..+ -|++.+++.++. ...+
T Consensus 170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~i 247 (474)
T PLN02482 170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGV-PKAATSATLTAPY-NDLEAVKKLFEANKGEI 247 (474)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCC-CCCCCCCeEEecC-CChHHHHHHHHhCCCce
Confidence 9999764 22368999999999976422110 10000 00 00 00 011 178889988863 2336
Q ss_pred eEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeeceec-cCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 166 KLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
++|+++..+...|.+.+ +++++++.++|++||+++|+||++.+ ..+........+....+.+++|.+| .|+++|.++
T Consensus 248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~gK~lg-gG~Pigav~ 326 (474)
T PLN02482 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLGKVIG-GGLPVGAYG 326 (474)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEecchhh-CCCceEEEE
Confidence 78888877777887654 78899999999999999999999922 3332211111111222457899998 889999998
Q ss_pred ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890 244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 318 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 318 (398)
++ +++++.+... ....+++.+++..+++.+.|+.. .+.+++..+.....++.|.+...+.+...+.....++
T Consensus 327 g~---~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~ 403 (474)
T PLN02482 327 GR---REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGM 403 (474)
T ss_pred Ec---HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceE
Confidence 88 7888877532 23345667888888888888752 2333444444444455555544444331121222233
Q ss_pred EEEeeCCCC-C--------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 319 ~~~~~~~~~-~--------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .+.+... . .+ ...+...++ ++||++.+.... .+. +++. .+++|++++++++.+++.+
T Consensus 404 ~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~--psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 404 F-GFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAPSQFE--AGF--TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred E-EEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEeccCCC--CCc--CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 2 2222110 0 01 124555555 799999874321 111 3444 5899999999999999875
No 296
>PRK12403 putative aminotransferase; Provisional
Probab=99.90 E-value=1.8e-20 Score=178.04 Aligned_cols=344 Identities=13% Similarity=0.061 Sum_probs=217.8
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+... +... .+..+....+++.+....+...+.++++++|++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~ 128 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEAN 128 (460)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence 4688999987653 2232 579999999999876321 1111 12234455566666555443346899999999999
Q ss_pred HHHHHHhc-------cCCC-EEEEeCCCCcChhhHH-HhcCcE-----------EEEeccCCC---CCCCC--------C
Q 015890 103 VNIVLTLC-------DAGD-SVVMFAPYYFNSYMSF-QMTGVT-----------HILVGPCSS---KTLHP--------D 151 (398)
Q Consensus 103 ~~~~~~l~-------~~gd-~Vl~~~p~~~~~~~~~-~~~g~~-----------~~~~~~~~~---~~~~~--------d 151 (398)
+.+++... ++++ .|+....+|++..... ...|.. +..+ |.+. ..+.. +
T Consensus 129 e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 207 (460)
T PRK12403 129 EVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHI-DEPYWYANGGELTPAEFGRRA 207 (460)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence 99999874 1223 4556677888864332 222211 1222 1110 00000 1
Q ss_pred hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEE
Q 015890 152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVN 224 (398)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~ 224 (398)
++++++.+. ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|........+ .+++
T Consensus 208 ~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv 287 (460)
T PRK12403 208 ALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL 287 (460)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE
Confidence 355666553 22336788888777777875 57788999999999999999999999 66666433322111 1233
Q ss_pred EcccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCCc--hHHHHHH-HHHHHHH
Q 015890 225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGP--EWVTERV-KDLVRNR 296 (398)
Q Consensus 225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~~~ 296 (398)
+++|.++ .|+ ++|.++++ +++.+.+... ....+++.++.+.+++.+.|+..+ +.+++.. +.....+
T Consensus 288 --~~gK~lg-gG~~Piga~v~~---~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~ 361 (460)
T PRK12403 288 --SIAKGLT-SGYVPMGGLVLS---KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQ 361 (460)
T ss_pred --EEccccc-ccccceEEEEEC---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 5899997 785 89999888 7777766421 133567788999999999887522 2333332 3444455
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+.+.+..++.+.+.-+... |.++.+.+..... . ...+...+ .++|+.+.+. .+.+|++... .
T Consensus 362 ~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-----~~~~~l~Ppl~i 434 (460)
T PRK12403 362 RCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIG-FEEGVIIRST-----LGRMIMAPALVA 434 (460)
T ss_pred HHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHH-HhCCEEEEec-----CCEEEEECCCCC
Confidence 5566555566654445555 6666666632110 0 11223333 4799999753 2468999887 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++++++++|.+++.++.+
T Consensus 435 t~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 435 GRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998864
No 297
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=2.3e-20 Score=177.15 Aligned_cols=361 Identities=15% Similarity=0.084 Sum_probs=230.0
Q ss_pred HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhh
Q 015890 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~ 83 (398)
.+...+...+.-+.+.....++.++|--..|. .++.+++++...+.+.-..+|+ -.....++++...+...+
T Consensus 14 ~~~~~d~~~~~~i~~e~~~q~~~l~liasen~--~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~ 91 (475)
T PLN03226 14 PLEEVDPEIADIIEKEKRRQWKGLELIASENF--TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALE 91 (475)
T ss_pred hhhhcCHHHHHHHHHHHHHHHcCeeEecCCcc--CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHH
Confidence 35556667777777777666889999888776 4789999988888432122221 123334454444444555
Q ss_pred hcCCCCCcEEE---ecChHHHHHHHHHHhccCCCEEEEeCC---CCcChhhHH---HhcCc----EEEEeccCCCCCCCC
Q 015890 84 ENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAP---YYFNSYMSF---QMTGV----THILVGPCSSKTLHP 150 (398)
Q Consensus 84 ~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~Vl~~~p---~~~~~~~~~---~~~g~----~~~~~~~~~~~~~~~ 150 (398)
.++.....+.+ .++|+.|+..++.+++++||+|+..+. +|..+.... +..+. +++.+ ..+.++..+
T Consensus 92 ~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y-~~~~~~g~i 170 (475)
T PLN03226 92 AFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY-RLDESTGLI 170 (475)
T ss_pred HhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee-eecCCCCCc
Confidence 66766655544 367789999999999999999998543 443322211 11111 22233 344455678
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccccCCcEEEEcc
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCVEGDHVVNLFS 227 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~~~~~~i~~~s 227 (398)
|+++|++.+.... +++|++. .+ .+|...| +++|.++|+++|+++++|++| ++.-+... ... ...+++++|
T Consensus 171 D~d~Le~~l~~~~-pklIv~~-~S-~~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~-~~~Div~~t 243 (475)
T PLN03226 171 DYDKLEKKAMLFR-PKLIIAG-AS-AYPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF-EYCDVVTTT 243 (475)
T ss_pred CHHHHHHHHhhcC-CeEEEEe-cC-cCCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC-CCCeEEEec
Confidence 9999999997543 5776663 23 3678888 889999999999999999999 44322111 111 235688999
Q ss_pred cccccCCCcceeEEEEccCCcH-----------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHH
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVE-----------GFATQLLKVQ-DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVR 294 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~-----------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 294 (398)
++|+++ |.+.|++++++... ++.+.+.... .....+++....+++..+++.. ....+++.+++.+
T Consensus 244 ~hK~L~--GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~ 321 (475)
T PLN03226 244 THKSLR--GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKA 321 (475)
T ss_pred Cccccc--CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 999993 33348888773110 2222222111 1223445566666666667652 2235677888999
Q ss_pred HHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEE----ecC
Q 015890 295 NREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRIS----FGG 364 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~----~~~ 364 (398)
+.+++.+.|.+.|. .+..+ .....+++++.....+..++...| ++.||.+..+..++ .++.||++ ..+
T Consensus 322 na~~L~~~L~~~G~-~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~ 399 (475)
T PLN03226 322 NAAALANRLMSKGY-KLVTGGTDNHLVLWDLRPLGLTGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSR 399 (475)
T ss_pred HHHHHHHHHHhCCC-EEEcCCCCCCEEEEEccCCCCCHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcHHHHHC
Confidence 99999999988765 55442 335667778754334555565544 68999997664221 35679985 222
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 015890 365 -LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++|++++.+.|.++++..
T Consensus 400 g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 400 GLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999853
No 298
>PRK07036 hypothetical protein; Provisional
Probab=99.90 E-value=2.1e-20 Score=177.70 Aligned_cols=345 Identities=12% Similarity=0.062 Sum_probs=220.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.. ...+ .....+.+..+++.+....+..-+.+.+++|+++|+
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAv 125 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF--GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAV 125 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence 4689999998764 3333 58999999999987621 1111 112234556666666655443346799999999999
Q ss_pred HHHHHHhc------c-CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC---CCCCC-------
Q 015890 103 VNIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK---TLHPD------- 151 (398)
Q Consensus 103 ~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~---~~~~d------- 151 (398)
+.+++... + ++ .+|+....+|++....+..... .+..+ +.+.. ....+
T Consensus 126 e~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 204 (466)
T PRK07036 126 DSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHL-SSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEe-cCCcccccccCCChHHHHHH
Confidence 99999753 1 22 5899999999997644322211 12222 11110 00111
Q ss_pred -hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEE
Q 015890 152 -ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVN 224 (398)
Q Consensus 152 -~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~ 224 (398)
++.+++.+. ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|...... ..+....
T Consensus 205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD 284 (466)
T PRK07036 205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD 284 (466)
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC
Confidence 234555553 22347899999777777875 57888999999999999999999999 65555322221 1111122
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHH
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVR 294 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~ 294 (398)
+.+++|.++ .| +++|.++++ +++.+.+.. .....+++.++.+.+++.+.|+.. .+.+++..+.-..
T Consensus 285 ivt~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~ 360 (466)
T PRK07036 285 IITFAKGLT-SGYQPLGAVIIS---ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPY 360 (466)
T ss_pred EEEEccccc-cCccccEEEEEc---HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 447799997 78 489999998 788777653 123347778999999999988752 2333444444444
Q ss_pred HHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890 295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~ 364 (398)
.++.|.+ +++++.+.-+... |.++.+.+..... . ...+...+ .++||.+.+. .+.+|+++..
T Consensus 361 l~~~L~~-l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~-----~~~~~l~Ppl 432 (466)
T PRK07036 361 FEERLAS-LRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHC-QERGLLVRPL-----EHLCVLSPPL 432 (466)
T ss_pred HHHHHHH-hccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHH-HHCCcEEeec-----CCEEEEeCCC
Confidence 4555543 3445543334455 5666676632110 0 23455555 4899999763 2578898776
Q ss_pred -CCHHHHHHHHHHHHHHHHHHhc
Q 015890 365 -LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+++|+++++++|.+++.++.+
T Consensus 433 ~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 433 IITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999988743
No 299
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=1.3e-21 Score=176.48 Aligned_cols=226 Identities=13% Similarity=0.142 Sum_probs=156.2
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS 145 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 145 (398)
|..-..++++.+++++ |.+ +.+++++|+|+++..++.+++++||+|+++.++|.+....+...|.+++++ +.+.
T Consensus 57 ~~g~i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v-~~~~ 130 (294)
T cd00615 57 PTGPIKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYL-KPER 130 (294)
T ss_pred CChHHHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEe-cCcc
Confidence 4444566777777766 543 345569999999999999999999999999999999988899999998888 5432
Q ss_pred CC-----CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-cccc
Q 015890 146 KT-----LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-KHCC 216 (398)
Q Consensus 146 ~~-----~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~~~~ 216 (398)
+. ..+|++.+++.+++++.+++|++++| |++|.+++ +++|+++|+++|+++|+||+| +.+.+. +...
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~ 206 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA 206 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence 21 36899999999986545799999988 68999999 999999999999999999999 334332 2223
Q ss_pred ccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890 217 VEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294 (398)
Q Consensus 217 ~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 294 (398)
...+.++++.|++|++ +|++.|+ +..++.. ....++.... ...+.+++.+.++++..++........+..++..+
T Consensus 207 ~~~~~div~~S~hK~l--~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 207 AMAGADIVVQSTHKTL--PALTQGSMIHVKGDL-VNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred hhcCCcEEEEchhccc--chHhHHHHHHhCCCc-CCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3346779999999987 5776655 4444321 1112222221 12244555556666666654322223444555566
Q ss_pred HHHHHHHHhc
Q 015890 295 NREIIREALS 304 (398)
Q Consensus 295 ~~~~l~~~l~ 304 (398)
+.+.+++.+.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 6666666553
No 300
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.90 E-value=1.8e-20 Score=188.51 Aligned_cols=313 Identities=17% Similarity=0.104 Sum_probs=226.7
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChH----HHHHHHHHHhccC-CC----EEEEeCCCCcChhh
Q 015890 61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN----QAFVNIVLTLCDA-GD----SVVMFAPYYFNSYM 128 (398)
Q Consensus 61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t----~a~~~~~~~l~~~-gd----~Vl~~~p~~~~~~~ 128 (398)
.+.|.|. +|..++...+.+++++++|. +.|.++++++ ++++.+++.+.++ || .|+++...|.....
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a 631 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA 631 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH
Confidence 5666663 57777778888888888786 8899999999 8999999999866 77 89999999998888
Q ss_pred HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206 (398)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~- 206 (398)
.++..|++++.+ +.+++| .+|+++|++++++++ .+++|++++|+|-+|...+ +++|+++|+++|+++++|.++
T Consensus 632 ~a~~~G~~vv~v-~~d~~G-~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~ 706 (993)
T PLN02414 632 SAAMCGMKIVVV-GTDAKG-NINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANM 706 (993)
T ss_pred HHHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCH
Confidence 888899999999 887665 789999999998532 3589999999999999988 999999999999999999999
Q ss_pred eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHh------------hccCCCCcc---
Q 015890 207 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV------------QDNIPICAS--- 267 (398)
Q Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~------------~~~~~~~~~--- 267 (398)
.+..+... ....+.+++++|.+|+|+ .+|..+|.+.++ +++...+-.. ...+..+.+
T Consensus 707 ~a~~~l~~-p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~---~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 707 NAQVGLTS-PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAP 782 (993)
T ss_pred HhccCcCC-ccccCCCEEEecCCccCCcCcccCCCCeeeEEEc---hhhcccCCCCccccCCCcccccCCCCcCCccchh
Confidence 44423221 222345688999999775 244568999888 4444433210 100011211
Q ss_pred ---hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc--EEEEeeCCC----CCCChHHHHHH
Q 015890 268 ---IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA--IYLWARLPE----KHLDDFEVVRW 337 (398)
Q Consensus 268 ---~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 337 (398)
.....++...+.. +.+.+++..+....+++++++.|++...+.+..+.+. .=+.++++. ...+..++.++
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~kr 862 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKR 862 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHH
Confidence 1222233333333 5567788888888899999999977433344433322 123344441 12356889999
Q ss_pred HHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 338 LAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 338 ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
|+ ++||.....+ |..++.+||+++- .+.+|+++++++|.....+..+
T Consensus 863 L~-d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 863 LM-DYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HH-HcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 87 8999875533 4457899999888 7899999999999988887764
No 301
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=3.1e-20 Score=176.27 Aligned_cols=348 Identities=14% Similarity=0.125 Sum_probs=221.2
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-C--CcEEEecChHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K--SSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~--~~v~~~~g~t~ 100 (398)
.+|+.|+||..|. ..++ .+|++.+++.+++.+.... + ......+.+..+++.+....+.. . ..+++++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~-~-~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE 132 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-H-TLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD 132 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccc-c-ccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence 4688999998874 3333 5899999999998652111 1 11122455666777776654322 1 23455588999
Q ss_pred HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-CC--CC----CChHHH---
Q 015890 101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-KT--LH----PDADWL--- 155 (398)
Q Consensus 101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-~~--~~----~d~e~l--- 155 (398)
|++.+++... ....+|+....+|+++...+-.... .+..+ +.+. .. +. -+.+.+
T Consensus 133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM-PYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence 9999999764 2336899999999998755442211 11222 2111 00 00 012222
Q ss_pred -HHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcc
Q 015890 156 -EKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 156 -~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s 227 (398)
++.++ ....+++|+++..+...|.+ .+++.++++.++|++||+++|.||++ |+..|........+....+.+
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt 291 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV 291 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE
Confidence 33332 12236889988777767775 57889999999999999999999999 665554333222222233447
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhcc
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP 305 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~ 305 (398)
++|.++ .|+++|.++.+ +++ +.+.......+++.|+.+.+++.+.|+.. ++.+.+..+.-.+.++.|.+..++
T Consensus 292 ~gK~l~-gG~Pi~av~~~---~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~ 366 (459)
T PRK06931 292 MSKAVG-GGLPLAVLGIK---KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKR 366 (459)
T ss_pred eccccc-CCcceeeeeeH---HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 789998 78999988877 443 54433344567788999999999988752 233444444445555666665555
Q ss_pred CCCCccccCCccEEEEeeCCCCCC----------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH
Q 015890 306 LGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK 371 (398)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~ 371 (398)
++.+.-+... |.++.+.+.+... + ...+...++ ++||++.+... ..+.+|+.++. .++++++
T Consensus 367 ~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid 442 (459)
T PRK06931 367 YPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR--NGNVVRLLPPLLITQAECE 442 (459)
T ss_pred CCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCcCHHHHH
Confidence 6654445555 6666666632110 0 123455554 89999976431 24679998777 7999999
Q ss_pred HHHHHHHHHHHHHhc
Q 015890 372 AAADRLRRGLEELVK 386 (398)
Q Consensus 372 ~~~~~l~~~~~~~~~ 386 (398)
+++++|.+++.++.+
T Consensus 443 ~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 443 EFIDRFEQALLAAVK 457 (459)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988765
No 302
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=6e-20 Score=165.77 Aligned_cols=309 Identities=19% Similarity=0.235 Sum_probs=216.4
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~ 123 (398)
..+.++++.+.+.+++.. ..+...++++.+++|++ ....+.++++|.|+.++++++ +++||+|+++..+|
T Consensus 14 ~~~e~~~v~~vl~sg~i~---~G~~v~~FE~~~ae~~G------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 14 GEEELAAVQEVLKSGWLT---GGPFVRRFEQAFAEYLG------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred chHHHHHHHHHHHcCCee---cChHHHHHHHHHHHHhC------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence 467788888888776543 35556889999999983 567888999999999999976 59999999999999
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..........|++++++ ++|.+.+.+|++.||++|.+++ |+|+..+ --|...+ +++|.++|++||+++|+|
T Consensus 85 vATan~i~~~Ga~PVFv-Did~~T~nid~~~ie~aIt~~t--KAIipVh---l~G~~~d---m~~i~~la~~~~l~vIED 155 (374)
T COG0399 85 VATANAVLLVGAKPVFV-DIDPDTLNIDPDLIEAAITPRT--KAIIPVH---LAGQPCD---MDAIMALAKRHGLPVIED 155 (374)
T ss_pred HHHHHHHHHcCCeEEEE-ecCCcccCCCHHHHHHHcccCC--eEEEEeh---hccCCCC---HHHHHHHHHHcCCeEEEE
Confidence 99999999999999999 9999999999999999999886 9988664 4677777 999999999999999999
Q ss_pred ece---eccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----------------C
Q 015890 204 NTY---FMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------I 262 (398)
Q Consensus 204 e~~---~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~----------------~ 262 (398)
.++ ..|.|...... ++ +.++|| +|.++ .| ..|.+++++ +++.++++.++.. .
T Consensus 156 aAqa~Ga~y~gk~vGt~-Gd--~~~fSF~~~K~it-tg-EGGav~tnd--~ela~k~~~lr~hG~~~~~~~~y~~~~~G~ 228 (374)
T COG0399 156 AAQAHGATYKGKKVGSF-GD--IGAFSFHATKNLT-TG-EGGAVVTND--EELAEKARSLRNHGLSRDAVFKYLHEELGY 228 (374)
T ss_pred cchhccCeecCcccccc-cc--eEEEEecCCCCcc-cc-CceEEEeCC--HHHHHHHHHHHHhCcCCCccccceeeeccc
Confidence 999 44556544433 22 344455 78886 44 669999988 8888888665421 1
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCc---cEE-EEeeCCCCCCChHHHHHH
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEG---AIY-LWARLPEKHLDDFEVVRW 337 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~ 337 (398)
.+.++....+.....|+. +++..+.-++..+.+.+.|++++...+.. +.+ .++ ..+.+++...+...+.+.
T Consensus 229 N~rm~~iqAAigl~QL~~----l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~ 304 (374)
T COG0399 229 NYRLTEIQAAIGLAQLER----LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMES 304 (374)
T ss_pred ccCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHH
Confidence 222334444444444443 45555555566667777777665423322 221 122 233444332345566665
Q ss_pred HHHhcC----eEEecCCCC--------C-----------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 338 LAHRHG----VVVIPGGAC--------G-----------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 338 ll~~~g----i~v~~g~~~--------~-----------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
| ++.| ++.+|.... . ....+.+-+.. .+++++++.++.|.+++..
T Consensus 305 L-~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 305 L-KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred H-HhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 5 6774 555553221 0 02356665555 7899999999999887753
No 303
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=1.7e-20 Score=177.34 Aligned_cols=338 Identities=13% Similarity=0.072 Sum_probs=212.6
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|.. .++ .+|.+.+++.+++.+.....+ +. +.+..+++.+....+ ..+.+.+++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~----~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e 123 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT-PT----ELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVM 123 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCC-CC----HHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHH
Confidence 46889999987643 333 589999999999876432222 22 334555555554433 2468999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-CcEEE--------Eecc-CCCCC---CCCChHHHHHhhcc-CCCCeE
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GVTHI--------LVGP-CSSKT---LHPDADWLEKTLET-KPTPKL 167 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~--------~~~~-~~~~~---~~~d~e~l~~~l~~-~~~~~~ 167 (398)
.+++... ....+|+....+|++....+... |.... .+.+ ..++- ...|++.+++.++. ...+++
T Consensus 124 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaa 203 (428)
T PRK12389 124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAA 203 (428)
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEE
Confidence 9999764 22368999999999976543322 21110 0000 00000 01268889888862 233688
Q ss_pred EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890 168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 168 v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
|+++..++..|.+ .+++++++|.++|++||+++|+||++ | ..+........+....+.+++|.+| .|+++|.+++
T Consensus 204 vi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lg-gG~Pi~av~~ 281 (428)
T PRK12389 204 VLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIG-GGLPIGAYGG 281 (428)
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhc-CCCceeEEeE
Confidence 8888777778875 46788999999999999999999999 4 2221111111111122348899997 7899999988
Q ss_pred cCCcHHHHHHHHH---hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCC-ccccCCccE
Q 015890 245 PSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAI 318 (398)
Q Consensus 245 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~ 318 (398)
+ +++.+.+.. .....+++.|+.+.+++.+.|+.. ++.+++..+.....++.+.+..++++.+ .+.... ++
T Consensus 282 ~---~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~-g~ 357 (428)
T PRK12389 282 R---KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLK-GA 357 (428)
T ss_pred H---HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC-cE
Confidence 8 788877642 223346778899999998888752 2333443344444445555444445542 222333 33
Q ss_pred EEEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 319 ~~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+ .+.+..... + ...+...+ .++||++.+.. .+.+.+++. .+++|++++++++.+++++
T Consensus 358 ~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 358 L-TVYFTDEKVTNYDQAERSDGEAFGKFFKLM-LNQGINLAPSK----YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred E-EEEEeCCCCCChhhhcccCHHHHHHHHHHH-HHCCcEeecCC----CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 2 233321100 1 23455555 48999998752 233556655 5899999999999999865
No 304
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=2.5e-20 Score=171.87 Aligned_cols=284 Identities=15% Similarity=0.079 Sum_probs=198.2
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCC
Q 015890 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKT 147 (398)
Q Consensus 72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~ 147 (398)
..++.+.+.+..+.+ .+..++++||++|+..++.+++++||+|+++...|.+.... ++.+|+++..+ +.
T Consensus 62 Pt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v-d~---- 134 (395)
T PRK08114 62 LTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF-DP---- 134 (395)
T ss_pred hhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE-CC----
Confidence 344455555554444 35678888899999999999999999999999999776654 46689998888 32
Q ss_pred CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC--CEEEEeece-eccCCCccccccCCcEEE
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG--SWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~--~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
.|.+.+++++++++ ++|++++|+||+|.+.| +++|+++|+++| +++++|.++ .++. ..+...+.+++
T Consensus 135 --~d~~~l~~~l~~~T--rlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~---~~pl~~GaDiv 204 (395)
T PRK08114 135 --LIGADIAKLIQPNT--KVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL---FKALDFGIDIS 204 (395)
T ss_pred --CCHHHHHHhcCCCc--eEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc---cCHHHcCCcEE
Confidence 26789999998776 99999999999999999 999999999984 999999999 4432 22233345699
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+.|.+|.++.++ .-.|.++.+ ++..+.+...........++...+.+...|+. +.-+.+++.+++..+.+.|
T Consensus 205 v~S~tKyl~Ghsdv~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~~na~~va~~L 277 (395)
T PRK08114 205 IQAGTKYLVGHSDAMIGTAVAN---ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRLRQHEESSLKVAEWL 277 (395)
T ss_pred EEcCcccccCCCcceeEEEEcC---HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHH
Confidence 999999886443 567877766 56666665554445556677777666666654 6777788889999999999
Q ss_pred ccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeE---EecCCCC-----------
Q 015890 304 SPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC----------- 352 (398)
Q Consensus 304 ~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~----------- 352 (398)
+++|.+. |+.| ..+-.+.+.+.... +.+...+++++-.+. +.-|..-
T Consensus 278 ~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~--~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~ 355 (395)
T PRK08114 278 AEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL--TDEQLANYLDNFSLFSMAYSWGGFESLILANQPEEI 355 (395)
T ss_pred HcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc--cHHHHHHHHHhCCcceeecccCCccceeccCCchhh
Confidence 9887632 3322 12345556664210 123333444443331 1111100
Q ss_pred ----------CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 353 ----------GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 353 ----------~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..++.||+|++- |+.+.+++.|.+++..+
T Consensus 356 ~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 356 AAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI 394 (395)
T ss_pred hccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 012579999996 67788888888888753
No 305
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.89 E-value=4.2e-21 Score=174.93 Aligned_cols=347 Identities=19% Similarity=0.173 Sum_probs=214.4
Q ss_pred CchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCC
Q 015890 15 EMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLY 88 (398)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~ 88 (398)
+.....-+.+.....++.++|--..|. .+|.+++++...+.+.-.-+| +-.....++++...+..+++++.+
T Consensus 5 d~ei~~li~~e~~rq~~~l~LiaSEN~--~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~ 82 (399)
T PF00464_consen 5 DPEIYELIEKEEERQRSTLNLIASENY--MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE 82 (399)
T ss_dssp THHHHHHHHHHHHHHHHSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S
T ss_pred CHHHHHHHHHHHHHHhcCccccCcccc--cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC
Confidence 444444455555555678898877766 478999988777755322222 223444567777777788888987
Q ss_pred CC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-----H-----HhcCcEEEEeccCCCCCCCCChHH
Q 015890 89 KS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----F-----QMTGVTHILVGPCSSKTLHPDADW 154 (398)
Q Consensus 89 ~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~d~e~ 154 (398)
++ +|-. .|++.|+..++.+|+++||+|+..++.+.++... . .....+.+.+ +++++...+|.|+
T Consensus 83 ~~~w~anvqp-~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 83 PKEWYANVQP-HSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPY-PVDPDTGLIDYDE 160 (399)
T ss_dssp TTTEEEE----SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEE-EB-TTTSSB-HHH
T ss_pred cccceEEeec-CCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEee-eeecCCCeECHHH
Confidence 44 3333 5666999999999999999999988887655421 1 2233578888 8887778899999
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccc
Q 015890 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~ 231 (398)
+++.++... |++|++...++| ..++ ++++.++|++.|.+|++|.+| +...|.-..+..+ .+++++|.+|+
T Consensus 161 l~~~a~~~k-PklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKt 233 (399)
T PF00464_consen 161 LEKLAKEHK-PKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKT 233 (399)
T ss_dssp HHHHHHHH---SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGG
T ss_pred HHHHHhhcC-CCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeecccc
Confidence 999998654 799999854433 2344 899999999999999999999 4445554455544 45889999999
Q ss_pred cCCCcceeEEEEccCC-----------cHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHH
Q 015890 232 YGMMGWRVGYIAYPSE-----------VEGFATQLLKVQD-NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREI 298 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~-----------~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 298 (398)
| +|.|.|.|.++++ .+++.+++..... ....++.....++.+-++.. ....+.++.+++.++++.
T Consensus 234 l--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~ 311 (399)
T PF00464_consen 234 L--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKA 311 (399)
T ss_dssp G---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred c--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 8 6888999988810 1678888876543 22233444444555455544 345578999999999999
Q ss_pred HHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC-----CCHH
Q 015890 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG-----LVED 368 (398)
Q Consensus 299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~-----~~~~ 368 (398)
|.+.|.+.|...+.+...+..+++++.....+..+... .|++.||.+.....+. .+..|||+... ..++
T Consensus 312 La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~-~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~ 390 (399)
T PF00464_consen 312 LAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEK-ALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEE 390 (399)
T ss_dssp HHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHH-HHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HH
T ss_pred HHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHH-HHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHH
Confidence 99999998884444555577888898654445555554 5579999995432221 24689999544 3445
Q ss_pred HHHHHHH
Q 015890 369 DCKAAAD 375 (398)
Q Consensus 369 ~~~~~~~ 375 (398)
|+.+..+
T Consensus 391 dm~~iA~ 397 (399)
T PF00464_consen 391 DMKEIAE 397 (399)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555444
No 306
>PLN03032 serine decarboxylase; Provisional
Probab=99.89 E-value=3.6e-20 Score=169.86 Aligned_cols=310 Identities=13% Similarity=0.063 Sum_probs=215.7
Q ss_pred cHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcE--EEecChHHHHHHHHHHhc--cCCCEEE
Q 015890 45 PKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVV 117 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl 117 (398)
.+.+++++...+.+.. ...+.......++.+.+.+++.+.++.+++++ ++|+|+|+|+..++.+.. .++..|+
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 3456777777765421 11222233568899999999999999988776 999999999998888765 2445899
Q ss_pred EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
++.-.|++....++.+|..+..+ |++.+| .+|+++|++++++++ .+.+|+++..+|+||.+.| +++|+++|+++
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V-~~d~~g-~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~ 190 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKV-PTLPSG-EIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL 190 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEe-eeCCCC-cCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh
Confidence 99999999999999999988888 887665 789999999998532 2578888889999999999 99999999999
Q ss_pred C-----CEEEEeece-e---ccCCC-ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------
Q 015890 197 G-----SWLVVDNTY-F---MYDGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------ 260 (398)
Q Consensus 197 ~-----~~livDe~~-~---~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~------ 260 (398)
| +++++|.++ . ++... +......+.+-++.|.||.++ ....+|.++.+ .+.++.+.....
T Consensus 191 g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g-~P~g~G~ll~r---~~~~~~~~~~~~Yl~~~d 266 (374)
T PLN03032 191 GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLG-CPMPCGVALTR---KKHVKALSQNVEYLNSRD 266 (374)
T ss_pred CCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccC-CCcCeEEEEEE---chhhHhhccCCcccCCCC
Confidence 6 589999999 2 22111 111111224466789999887 34558998888 344444422111
Q ss_pred -cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890 261 -NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338 (398)
Q Consensus 261 -~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (398)
....+-+......+...|.. +.+.+.+..++..++++++.+.|++.+...+..|. .+.+.+.-+. ... +
T Consensus 267 ~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~-~~~V~f~~~~----~~~----~ 337 (374)
T PLN03032 267 ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL-SSTVVFERPM----DEA----F 337 (374)
T ss_pred CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC-ceEEEEcCCC----cHh----H
Confidence 11122233344444445544 56778999999999999999999887764445555 6666555442 111 2
Q ss_pred HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 339 AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 339 l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
.+|..+.+ ..+.+|+++.. .+.+.++++++.|++
T Consensus 338 --~~~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 338 --IKKWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred --hheeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 24555554 23589999887 677888888887764
No 307
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.89 E-value=8.8e-21 Score=165.54 Aligned_cols=319 Identities=17% Similarity=0.150 Sum_probs=229.0
Q ss_pred CCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc--CCC
Q 015890 43 QPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--AGD 114 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~--~gd 114 (398)
..+|+|++|+.+.+.....+.- +.+.....|++++++.- + .+.-++.++.--|++..+..|.+ ||-
T Consensus 185 s~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH----q--K~aALlFsSCfVANDstLftLak~lpgc 258 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH----Q--KEAALLFSSCFVANDSTLFTLAKKLPGC 258 (570)
T ss_pred cCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh----c--CcceeeeeeeeeccchHHHHHHHHCCCc
Confidence 4699999999999876331111 11233345566666543 3 33345555565777777777643 677
Q ss_pred EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
.|......|.+.....+..++.-.-+ . +-|+++|++++. +...||.|.+++.++.+|.+.| |++|+++
T Consensus 259 ei~SD~gNHASMI~GIrns~v~K~IF----r---HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDv 328 (570)
T KOG1360|consen 259 EIFSDEGNHASMIQGIRNSRVPKHIF----R---HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDV 328 (570)
T ss_pred EEeccccchHHHHHHhhhcCCcceee----c---cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHH
Confidence 88888888888888888777643333 1 228888998887 4445899999999999999999 9999999
Q ss_pred HHHcCCEEEEeece-e-ccCCCcccc-----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890 193 CKAAGSWLVVDNTY-F-MYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265 (398)
Q Consensus 193 ~~~~~~~livDe~~-~-~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~ 265 (398)
+++||.+.++||++ . .|+...-.. .....+|+.+++.|+||+-| ||+... ..+++.++.+..++-++
T Consensus 329 ah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat---~~LvDmiRSyAaGFIFT 402 (570)
T KOG1360|consen 329 AHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT---RKLVDMIRSYAAGFIFT 402 (570)
T ss_pred HHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh---hhHHHHHHHhcCceEEe
Confidence 99999999999999 2 333222211 12234588999999999888 999988 79999999887655444
Q ss_pred --cchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 266 --ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 266 --~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
.++...+.+.++++.. .+..+..++..+++..++++.|.+.|. -+.+.+ +..+.+.+... .-+.+..+.|+.++
T Consensus 403 TSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~Gi-PVi~~p-SHIiPv~vgda-~l~~~~sd~Li~~h 479 (570)
T KOG1360|consen 403 TSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGI-PVIPNP-SHIIPVRVGDA-ALAKQASDILISKH 479 (570)
T ss_pred cCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCC-cccCCC-cceeeeeccCH-HHHHHHHHHHHHhc
Confidence 4566666666666641 122356667788889999999999887 444444 56666666432 24567888899999
Q ss_pred CeEEecCCCC---CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 343 GVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 343 gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
||+|..-.+. .+...+||...- .+.+.++.+++.|..++.++.-
T Consensus 480 ~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 480 NIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred CeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 9999877654 345689998765 6888999999999999988753
No 308
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=4.2e-21 Score=177.64 Aligned_cols=316 Identities=14% Similarity=0.100 Sum_probs=205.2
Q ss_pred CCCCCcHHHHHHHHHhhcCC---CCCCCCCC---CCcHHHHHHHHHHHhhhcCC-CCCcEEEecC-hHHHHHHHHHHhcc
Q 015890 40 VYWQPPKMAMEKVKELVWDP---SISKYGAD---EGLPELRDALVKKLNQENKL-YKSSVMVTAG-ANQAFVNIVLTLCD 111 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~---~~~~y~~~---~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g-~t~a~~~~~~~l~~ 111 (398)
.+...|+.|++++.+.+.+. ....|... ....++.+..++.++++++. ++++|++++| +|++++.++.++..
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~ 85 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG 85 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence 36668999999999987431 12223223 22234555555556666676 4678999977 99999999999987
Q ss_pred CC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 112 AG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 112 ~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
++ |.|+. .+....+...++..|.++..+ +.++++...+ .+..+..++++ +++|.+++..|.||+..+
T Consensus 86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~lV~~~h~~t~tG~~~~----- 156 (355)
T cd00611 86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIV-AAKEEGKYTKIPDVETWDLAPD--AAYVHYCSNETIHGVEFD----- 156 (355)
T ss_pred CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEE-ecccccCCCCCCCHhhcCCCCC--CCEEEEeCCcccccEEcc-----
Confidence 44 44433 222223344778889988888 6554331113 22333344444 599999999999999743
Q ss_pred HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh--------
Q 015890 188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------- 258 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-------- 258 (398)
++++.+|+++++|.++ ++....... ..+ ++..|.+|.+|++| +|.++++ +++.+++...
T Consensus 157 ---~i~~~~g~~~~VDa~qs~g~~~idv~--~~~--~~~ss~~K~lGP~G--~g~l~~~---~~~~~~~~~~~~~~~~~~ 224 (355)
T cd00611 157 ---EVPDTGGVPLVADMSSNILSRPIDVS--KFG--VIYAGAQKNLGPAG--VTVVIVR---KDLLGKARKITPSMLNYK 224 (355)
T ss_pred ---eecccCCCeEEEEccccccCCCCCHH--HhC--EEEeecccccCCCc--eEEEEEC---HHHHhhcccCCCCcccHH
Confidence 2344599999999999 665433322 223 45566899998776 6888888 6666554321
Q ss_pred ----hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCc-c-ccC--CccEEEEeeCCCCC
Q 015890 259 ----QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGA-V-KGG--EGAIYLWARLPEKH 328 (398)
Q Consensus 259 ----~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~--~~~~~~~~~~~~~~ 328 (398)
.....+++|.....++.++++... . .++++.++.+++.+++++.|++++++. . ..+ ..+..+.+.++..
T Consensus 225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~- 303 (355)
T cd00611 225 THADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE- 303 (355)
T ss_pred HHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh-
Confidence 011245778888888888888633 2 378888899999999999999985421 1 111 2123355555432
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
....++...+ .+.|+.+.++.. ..+.+|+|+.. .+.+|+++++++|+++
T Consensus 304 ~l~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 304 ELEKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred hhhHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1123333444 478998655543 34789999988 8999999999999874
No 309
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=3.7e-20 Score=174.08 Aligned_cols=287 Identities=21% Similarity=0.212 Sum_probs=189.7
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (398)
+...++++.++++. +. +..++++|+++|+++++.+++++||+|+++...|.+....+ +..|++++++ +.
T Consensus 64 p~~~~le~~lA~l~----g~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~ 136 (433)
T PRK08134 64 PTVAVLEERVAALE----GG--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV-KP 136 (433)
T ss_pred hHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE-CC
Confidence 34566666666665 43 34688999999999999999999999999999997654433 5589999988 54
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
+ |++.+++.+++++ ++|++.+|+||+|.+.| +++|+++|+++|+++|+|.++ .++...+ ...+.+
T Consensus 137 ~------d~~~l~~~i~~~T--klV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~p---l~~GaD 202 (433)
T PRK08134 137 G------DIDGWRAAIRPNT--RLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLRP---FEHGAD 202 (433)
T ss_pred C------CHHHHHHhcCCCC--eEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhcCCC
Confidence 2 7899999999876 99999999999999999 999999999999999999999 4443222 123456
Q ss_pred EEEcccccccCCCcceeEEEEccC-CcH-----------------------------HHHHHHH-HhhccCCCCcchHHH
Q 015890 223 VNLFSFSKAYGMMGWRVGYIAYPS-EVE-----------------------------GFATQLL-KVQDNIPICASIISQ 271 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G~i~~~~-~~~-----------------------------~~~~~l~-~~~~~~~~~~~~~~~ 271 (398)
+++.|.+|.++.+|-.+|.++... ... .+....+ ..........++...
T Consensus 203 ~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A 282 (433)
T PRK08134 203 LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNA 282 (433)
T ss_pred EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHH
Confidence 889999999987775566554321 000 0000000 011122334555555
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChHH
Q 015890 272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~ 333 (398)
+.+...|+. +..+.++..+++.++.+.|+.++.+. +..| . .+-.+.+++.. +.+
T Consensus 283 ~l~~~gL~t----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~----~~~ 354 (433)
T PRK08134 283 WQLLQGIET----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG----GRA 354 (433)
T ss_pred HHHhcCCCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC----CHH
Confidence 544444443 67777788888888888888776532 2111 1 13345556642 123
Q ss_pred HHHHHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 334 VVRWLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 334 ~~~~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
...+++++-.+... -|... + .++.||+|++- |+.+.+++.|.+++++..+
T Consensus 355 ~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 355 AGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL---EDADDLIDDLKRALKAAEK 430 (433)
T ss_pred HHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhh
Confidence 33344444444321 11110 0 13579999997 6777888999998887554
No 310
>PRK06148 hypothetical protein; Provisional
Probab=99.89 E-value=2.8e-20 Score=191.57 Aligned_cols=346 Identities=12% Similarity=0.068 Sum_probs=228.4
Q ss_pred HcCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
.+|+.|+||..|...++ .+|++.+++.+++.+..... ....+....+++.+....+...+.+.+++||++|++.+
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~----~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~A 696 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT----RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLA 696 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC----CcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHH
Confidence 45899999988865554 68999999999987531111 11234455666666655443346799999999999999
Q ss_pred HHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC---CCCC-CC-------hHHHHHhh
Q 015890 106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS---KTLH-PD-------ADWLEKTL 159 (398)
Q Consensus 106 ~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~---~~~~-~d-------~e~l~~~l 159 (398)
++... ....+|+....+|++....+-.... .+..+ +.+. ..+. .+ .+.+++.+
T Consensus 697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~l~~~i 775 (1013)
T PRK06148 697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVA-EVPDSYRGPERWPDAEHGRRFAESVAEQI 775 (1013)
T ss_pred HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEc-CCCCccccCCCCChhhhHHHHHHHHHHHH
Confidence 99864 2336899999999987643222110 11111 1110 0011 01 13455555
Q ss_pred c----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-ccccccCCcEEEEcccccc
Q 015890 160 E----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 160 ~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~~~~~i~~~s~sK~ 231 (398)
+ ....+++|+++..+...|. ..|++.++++.++|+++|+++|.||++ |+..|. .......+....+.+++|.
T Consensus 776 ~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~ 855 (1013)
T PRK06148 776 AAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKP 855 (1013)
T ss_pred HhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeeccc
Confidence 3 2234788988877766676 467889999999999999999999999 665554 2222222333345578999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+| .|+++|.++++ +++.+.+.... ...+++.|+.+.+++.+.|+.. ++..++..+.-...++.|.+..++++.
T Consensus 856 lg-gG~Plgav~~~---~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~ 931 (1013)
T PRK06148 856 IG-NGHPMGAVVTT---REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDI 931 (1013)
T ss_pred cc-CCcceEEEEEc---HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 98 88999999999 78887765321 3457788999999999988752 233444444445556666665556665
Q ss_pred CccccCCccEEEEeeCCCCCC-------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.-+... |.++.+.+..... ....+++.++ ++||++.+... ..+.+||.+.. .+++++++++++|.++
T Consensus 932 i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~~~ 1007 (1013)
T PRK06148 932 IGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLDDV 1007 (1013)
T ss_pred ceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 4445555 6777777643210 1234556554 89999976421 24779998777 7999999999999999
Q ss_pred HHHHh
Q 015890 381 LEELV 385 (398)
Q Consensus 381 ~~~~~ 385 (398)
+.++.
T Consensus 1008 l~~~~ 1012 (1013)
T PRK06148 1008 LAAAL 1012 (1013)
T ss_pred HHHHh
Confidence 98753
No 311
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.89 E-value=2.4e-20 Score=175.41 Aligned_cols=342 Identities=12% Similarity=0.033 Sum_probs=214.6
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+|+..|.. .++ .+|.+.+++.+++.+.....+ + .+....+++.+....+...+.+.+++++++|++
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e 124 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGL-T----SEQEILFAEELFSYLGLEDHKIRFVSSGTEATM 124 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 46889999987743 333 589999999999876432111 2 234455666665544433368999999999999
Q ss_pred HHHHHhcc-CC-CEEEEeCCCCcChhhH---HHhc-CcE--E--EEe--ccCCCCCC---CCChHHHHHhhcc-CCCCeE
Q 015890 104 NIVLTLCD-AG-DSVVMFAPYYFNSYMS---FQMT-GVT--H--ILV--GPCSSKTL---HPDADWLEKTLET-KPTPKL 167 (398)
Q Consensus 104 ~~~~~l~~-~g-d~Vl~~~p~~~~~~~~---~~~~-g~~--~--~~~--~~~~~~~~---~~d~e~l~~~l~~-~~~~~~ 167 (398)
.+++.... .| .+|+....+|+++... .... +-. . ... .+...... .-|++.+++.+.. ...+++
T Consensus 125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aa 204 (433)
T PRK00615 125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAG 204 (433)
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEE
Confidence 99997652 23 6899999999997521 1111 100 0 000 00000000 1267889888863 233678
Q ss_pred EEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeeceec-cCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 168 VSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 168 v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
|+++..+...|.+. +++.+++|.++|++||+++|+||++.+ ..|........+....+.+++|.+| .|+++|+++++
T Consensus 205 vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~~gK~lg-gG~p~~av~~~ 283 (433)
T PRK00615 205 VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITVYGKILG-GGLPAAAVVAH 283 (433)
T ss_pred EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEEEccccc-CCcceeeeeec
Confidence 88887677778754 577899999999999999999999922 2332211111111111235899997 77889999999
Q ss_pred CCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCC-CccccCCccEE
Q 015890 246 SEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE-GAVKGGEGAIY 319 (398)
Q Consensus 246 ~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~ 319 (398)
+++++.+... ....+++.++...+++.+.|+.. .+.+++..+.....++.+++.+++.+. +.... . +.+
T Consensus 284 ---~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~-G~~ 358 (433)
T PRK00615 284 ---KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y-GSM 358 (433)
T ss_pred ---HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e-ceE
Confidence 7888877432 12345567888888888888752 233444444444455556666555443 22233 3 566
Q ss_pred EEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 320 LWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 320 ~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+.+.+..... + ...+...++ ++||++.+... +. .=++.. .+++|++++++++.++++++.
T Consensus 359 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~---~~-~~ls~~-ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 359 FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPF---EA-SFLSSA-HSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred EEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCccc---cc-cceecC-CCHHHHHHHHHHHHHHHHHHh
Confidence 6666643210 1 124566665 78999987542 11 124555 589999999999999998865
No 312
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.89 E-value=2.2e-20 Score=176.14 Aligned_cols=338 Identities=14% Similarity=0.092 Sum_probs=213.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ..++ .+|++.+++.+++.+...... .....+....+++.+.+..+..-+.+++++++++|++
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e 119 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF--GGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVE 119 (427)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHH
Confidence 4688999998764 2332 589999999999876321111 0011223445555555544433468999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-CcE-------------EEEeccCCCCCC-----CCChHHHH
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GVT-------------HILVGPCSSKTL-----HPDADWLE 156 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~-----~~d~e~l~ 156 (398)
.+++.... +| .+|+....+|++....+-.. +.. ...+ +.+...+ .-|+++++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~l~ 198 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFA-PAPQNRFDEEWNEEAITPLA 198 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEc-CCCCccccchhHHHHHHHHH
Confidence 99987542 23 68999999999865433222 111 0111 1111101 01456777
Q ss_pred Hhhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccc
Q 015890 157 KTLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFS 229 (398)
Q Consensus 157 ~~l~~-~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~s 229 (398)
+.+.. ...+++|+++.. ++..|. ..+.+++++|.++|++||+++|+||++ ++..|........ ..+++ +++
T Consensus 199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~--~~g 276 (427)
T TIGR00508 199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDIL--CVG 276 (427)
T ss_pred HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEE--Eec
Confidence 77752 233677888863 666666 457889999999999999999999999 5555543222111 12233 479
Q ss_pred cccCCCcc-eeEEEEccCCcHHHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 230 KAYGMMGW-RVGYIAYPSEVEGFATQLLKVQ-----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 230 K~~~~~G~-r~G~i~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
|.++ +|+ .++.++.+ +++.+.+.... ...++..++++.+++.++|+...+ ++..++.+++.+++++.|
T Consensus 277 K~l~-gG~~p~~a~~~~---~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L 350 (427)
T TIGR00508 277 KALT-GGYMTLSATVTT---DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKREL 350 (427)
T ss_pred hhhh-cCcccceEEEEc---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 9996 785 78888888 78878776421 234566788888888888874111 122344555555555555
Q ss_pred ccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 304 SPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 304 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+++.. +.-.... +.++.+.+... .....+..+++ ++||.+.+. ...+|+++.. .+++|++++++++.+
T Consensus 351 ~~l~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 351 SPLRKNPVVKDVRVL-GAIGVVEMYKP-VNVEELQKKFV-EQGVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred HHhhcCCCEEeEecc-ccEEEEEECCc-cCHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 54322 1112223 55566666432 23566777765 889999764 2479998876 689999999999999
Q ss_pred HHHH
Q 015890 380 GLEE 383 (398)
Q Consensus 380 ~~~~ 383 (398)
++.+
T Consensus 423 ~l~~ 426 (427)
T TIGR00508 423 ALHE 426 (427)
T ss_pred HHhc
Confidence 8854
No 313
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=4.1e-20 Score=173.54 Aligned_cols=286 Identities=19% Similarity=0.188 Sum_probs=187.3
Q ss_pred CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~ 144 (398)
....+++.++++. |. +..+++++|++|+..++.+++++||+|+++...|.+... .++..|++++.+ + +
T Consensus 70 ~~~~Le~~lA~l~----g~--~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-d 141 (436)
T PRK07812 70 TQDVVEQRIAALE----GG--VAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV-E-D 141 (436)
T ss_pred hHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEE-C-C
Confidence 3345555555554 53 346888888999999999999999999999988876553 344578888777 3 2
Q ss_pred CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i 223 (398)
. .|++.+++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|+++ .+.... ....+.++
T Consensus 142 ~----~d~e~l~~ai~~~t--klV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~~---pl~~GaDi 209 (436)
T PRK07812 142 P----DDLDAWRAAVRPNT--KAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLIR---PLEHGADI 209 (436)
T ss_pred C----CCHHHHHHhCCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC---chhcCCCE
Confidence 1 28899999998765 99999999999999999 999999999999999999998 433221 12234558
Q ss_pred EEcccccccCCCcceeEEEEccCC-c---------------------------HHHHHHHH-HhhccCCCCcchHHHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYPSE-V---------------------------EGFATQLL-KVQDNIPICASIISQHLA 274 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~~~-~---------------------------~~~~~~l~-~~~~~~~~~~~~~~~~~~ 274 (398)
++.|++|.+|..|--+|.+++.++ . +.++..+. ..........++...+.+
T Consensus 210 vv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~ 289 (436)
T PRK07812 210 VVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI 289 (436)
T ss_pred EEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 889999999866655666554321 0 00111111 112223455566555554
Q ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccC----------------C-ccEEEEeeCCCCCCChHHHHH
Q 015890 275 LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG----------------E-GAIYLWARLPEKHLDDFEVVR 336 (398)
Q Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~ 336 (398)
...|+. +..+.++..+++..+.+.|++++.+ +++.| . .|-.+.+++..+ .+...
T Consensus 290 ~rgl~t----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~----~~~~~ 361 (436)
T PRK07812 290 AQGLET----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGG----VEAGK 361 (436)
T ss_pred hcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----HHHHH
Confidence 444443 6778888889999999999988763 22222 1 133455566421 22233
Q ss_pred HHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 337 WLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 337 ~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+++++-.+.-. -|... + .++.||+|++- |+.+.+++.|.+++.+..
T Consensus 362 ~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl---Ed~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 362 AFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI---EGIDDILADLEAGFAAAK 433 (436)
T ss_pred HHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhh
Confidence 34433333222 12111 0 13579999997 677788888888887654
No 314
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.88 E-value=5.1e-20 Score=168.05 Aligned_cols=345 Identities=14% Similarity=0.087 Sum_probs=228.8
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~ 102 (398)
+|+.++|-..|- +..+ -.|++.+|+.+++.+- ..|.+. ..... -..+++.|.+..+ .+-+.|++++|+++|+
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l--~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAv 118 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKL--PHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAV 118 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhC--CchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHH
Confidence 466777766543 1221 4899999999999872 222111 11111 3455555555445 3367899999999999
Q ss_pred HHHHHHhc-------cCC-CEEEEeCCCCcChhhHHHhcC--------------cEEEEeccCCC---C---C-CC----
Q 015890 103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQMTG--------------VTHILVGPCSS---K---T-LH---- 149 (398)
Q Consensus 103 ~~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~---~---~-~~---- 149 (398)
+.+++... ++. .+++.-..+|++-.-.+-+.| ..+..+ +.+. . + +.
T Consensus 119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~-~~P~~y~~~~~~~~~~~~~ 197 (449)
T COG0161 119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHL-PAPYAYRRGFFGEGDEEFA 197 (449)
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceec-CCCcccccCCCCCChHHHH
Confidence 99999864 232 358888999987443221111 112222 2221 0 1 11
Q ss_pred CChHHHHHhhcc-C-CCCeEEEEeCCCCC-CccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890 150 PDADWLEKTLET-K-PTPKLVSVVNPGNP-SGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 150 ~d~e~l~~~l~~-~-~~~~~v~i~~p~np-tG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i 223 (398)
-.+++|++++.. + ..+++++++..... +|++ +|+..++++.++|++||+++|.||+- |+..|..+.....+...
T Consensus 198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~P 277 (449)
T COG0161 198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVP 277 (449)
T ss_pred HHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCC
Confidence 125677777763 2 33788888865555 7875 56678999999999999999999999 88888776665544444
Q ss_pred EEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNR 296 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~ 296 (398)
.+-+++|.++-+-+++|.+++. +++.+.+... ..+.+++.|+.+.+++.+.|+. .++++++..+.-....
T Consensus 278 Di~~~aKGLT~GY~Pl~a~l~~---~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~ 354 (449)
T COG0161 278 DILCLAKGLTGGYLPLSAVLTS---DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQ 354 (449)
T ss_pred CeeeecccccccchhhHhHhhh---HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4558889997344688988888 6777776543 4567788999999999998885 2355555555555566
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE 367 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~ 367 (398)
+.|.+.+...+.+.-+... |++..+++.....+ ...+...+ .++|++++|. .+.+-++... .+.
T Consensus 355 ~~L~~~l~~~p~VgdVR~~-Gli~~iElv~d~~t~~~f~~~~~~~~~~~~-~e~Gl~iRp~-----g~~i~~~PPliit~ 427 (449)
T COG0161 355 AGLQAALADHPLVGDVRGL-GLIGAIELVADKATKTPFEARVGARVRAAA-LERGLLIRPL-----GDVIYLMPPLIITR 427 (449)
T ss_pred HHHHHhcccCCcEEEeecc-ceEEEEEEecccccccchhhhHHHHHHHHH-HHCCeEEeec-----CCEEEEcCCccCCH
Confidence 6676666655554445555 77777777543321 23444444 5899999996 3466666665 799
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015890 368 DDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~~ 386 (398)
++++++++++.+++++...
T Consensus 428 ~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 428 EEIDELVDALREALDETLA 446 (449)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988654
No 315
>PLN02880 tyrosine decarboxylase
Probab=99.88 E-value=7.9e-20 Score=174.36 Aligned_cols=335 Identities=13% Similarity=0.079 Sum_probs=227.8
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-------cEEEecChHHHHHHHHHHhcc------
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-------SVMVTAGANQAFVNIVLTLCD------ 111 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~------ 111 (398)
++.++..+.....+.....|..++...++++.+.+|+.+..|.+.. .-++++|+|+++..++.+...
T Consensus 95 ~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~ 174 (490)
T PLN02880 95 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKV 174 (490)
T ss_pred HHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHh
Confidence 4555555544445544566667788899999999999999988653 367899999999888776542
Q ss_pred -----CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCC-CCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCc
Q 015890 112 -----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSG 178 (398)
Q Consensus 112 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG 178 (398)
+.-.|++++-+|.+...+++.+|+ .++.+ |++. ..+.+|++.|++++++ +..|-+|+.+.++..||
T Consensus 175 g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V-p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~G 253 (490)
T PLN02880 175 GKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL-KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSST 253 (490)
T ss_pred cccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe-ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCc
Confidence 111456788889999999999998 36778 8875 3568999999999962 22356777778899999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 179 TYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
.+.| +++|+++|+++|+|++||.+| .. .... ...... ...+-++.++||+++ ....+|.++.++. ..+..
T Consensus 254 aiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~-~~l~~ 328 (490)
T PLN02880 254 AVDP---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDR-NALIQ 328 (490)
T ss_pred ccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCH-HHHHH
Confidence 9999 999999999999999999999 21 1111 001110 123466779999995 6778999888852 22333
Q ss_pred HHHHhhcc--------------CCCC---cchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890 254 QLLKVQDN--------------IPIC---ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315 (398)
Q Consensus 254 ~l~~~~~~--------------~~~~---~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 315 (398)
.+..-..+ ..++ ...+....+...++. +.+.+.++.++..++++++.+.+++.+..++..++
T Consensus 329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~ 408 (490)
T PLN02880 329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR 408 (490)
T ss_pred HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 32111000 0000 001112222223333 55777888888889999999999887766777665
Q ss_pred ccEEEEeeCCCCCCCh-------HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhc
Q 015890 316 GAIYLWARLPEKHLDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 316 ~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
..+.++++++....+. .++.++|.++..+++.+ ..+.+..++|++++. +++++++.+++.|.+..+++..
T Consensus 409 ~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 409 IFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred ceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5667777775322111 34566665445565544 334456799999887 4568999999999999888754
No 316
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=7.3e-19 Score=165.95 Aligned_cols=323 Identities=16% Similarity=0.194 Sum_probs=207.2
Q ss_pred CCeEEcCCccCCCCC-----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 30 KNAVSLAQGVVYWQP-----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~-----~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
.....|+.|.++.+. +++-+.++.+.+...+ .. ......++++.+++++ +. +++++++|+|+++..
T Consensus 23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~--~G~~~~~fe~~lA~~~----g~--~~~v~~~sGt~al~~ 93 (438)
T PRK15407 23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LT--TGRFNDAFEKKLAEFL----GV--RYALLVNSGSSANLL 93 (438)
T ss_pred cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-cc--CChhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHH
Confidence 344556777765542 2333444545444322 11 2233578888888887 33 468999999999999
Q ss_pred HHHHh---------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 105 IVLTL---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 105 ~~~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
++.++ +++||+|+++.++|..+...+...|++++.+ +.+...+.+|++.+++.+++++ ++|+++++
T Consensus 94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v-dvd~~~~~id~~~le~~i~~~t--kaVi~~~~-- 168 (438)
T PRK15407 94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFV-DVELPTYNIDASLLEAAVSPKT--KAIMIAHT-- 168 (438)
T ss_pred HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHcCcCC--eEEEEeCC--
Confidence 99876 3789999999999999999999999999999 8876667889999999998765 89988853
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+|...+ +++|.++|+++|+++|+|++| ++ +.|...... ++ +.++|+ +|.+. .|- .|++++++ ++
T Consensus 169 -~G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~-gd--~~~fSf~~~k~~~-~ge-GG~l~t~d--~~ 237 (438)
T PRK15407 169 -LGNPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF-GD--IATLSFYPAHHIT-MGE-GGAVFTND--PL 237 (438)
T ss_pred -CCChhh---HHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc-Cc--eEEEeCCCCCCcc-ccC-ceEEEECC--HH
Confidence 565555 899999999999999999999 43 445433322 23 444555 57674 332 58999887 67
Q ss_pred HHHHHHHhhcc---------------------------------------CCCCcchHHHHHHHHHhcCCchHHHHHHHH
Q 015890 251 FATQLLKVQDN---------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKD 291 (398)
Q Consensus 251 ~~~~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 291 (398)
+.+.++..+.. ..+.++....+.+...|+ .+++..+.
T Consensus 238 l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~----~l~~~~~~ 313 (438)
T PRK15407 238 LKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLE----KLPGFIEA 313 (438)
T ss_pred HHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHH----HHHHHHHH
Confidence 76665543321 111223333333333443 24566666
Q ss_pred HHHHHHHHHHHhccCCC-Cccc-cCCc---cE-EEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCC--------CC---
Q 015890 292 LVRNREIIREALSPLGE-GAVK-GGEG---AI-YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGA--------CG--- 353 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~-~~~~-~~~~---~~-~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~--------~~--- 353 (398)
-+++.+++.+.|+.++. .... .+.+ .+ .+.+.++.. ..+..++++.| +++||.++.... |.
T Consensus 314 R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p~~~~~~ 392 (438)
T PRK15407 314 RKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYL-EENKIGTRLLFAGNLTRQPYFKGVK 392 (438)
T ss_pred HHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCccccCCCccccChhhhhcC
Confidence 66677777888877653 2221 1221 12 223344321 12457778877 588997754321 00
Q ss_pred ---C----------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 354 ---C----------RGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 354 ---~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
. ...+-+-+.. .++++++..++.|+++++
T Consensus 393 ~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 393 YRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 1224444444 688999999999988774
No 317
>PLN02590 probable tyrosine decarboxylase
Probab=99.88 E-value=2.8e-19 Score=170.53 Aligned_cols=336 Identities=14% Similarity=0.075 Sum_probs=230.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-------CcEEEecChHHHHHHHHHHhccC----
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCDA---- 112 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-------~~v~~~~g~t~a~~~~~~~l~~~---- 112 (398)
.++.++..+..+..+.....|..++...++++.+.+|+.+..+.+. ..-++++|+|+|+..++.+....
T Consensus 142 ~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~ 221 (539)
T PLN02590 142 SVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK 221 (539)
T ss_pred cHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh
Confidence 3455555555544554466777788899999999999999998864 24678999999998887765421
Q ss_pred ----C--C-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCC-CCCCChHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015890 113 ----G--D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSK-TLHPDADWLEKTLET----KPTPKLVSVVNPGNPS 177 (398)
Q Consensus 113 ----g--d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~d~e~l~~~l~~----~~~~~~v~i~~p~npt 177 (398)
+ + .|++++.+|+++..+++.+|+ .++.+ |++.. .+.+|++.|+++|++ +..|-+|+.+..+..|
T Consensus 222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V-p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL-KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE-eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 1 1 455678889999999999997 57778 88753 478999999999963 2235677888889999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece--ec-cCCCcccccc--CCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FM-YDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~-~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
|.+-| +++|+++|++||+|++||.+| +. .......... ...+=+..+.||++. ..+.+|.+++++. ..+.
T Consensus 301 GaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~-~~l~ 375 (539)
T PLN02590 301 AAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDR-YSLI 375 (539)
T ss_pred cccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCH-HHHH
Confidence 99999 999999999999999999999 21 1111111111 111234568999996 6678898888862 1233
Q ss_pred HHHHH---hhc---------------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 253 TQLLK---VQD---------------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 253 ~~l~~---~~~---------------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
+.+.. +.. ....+- .+....+...|+. +.+.+.+++++..++++++.+.+++.+.+++..
T Consensus 376 ~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsR-r~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~ 454 (539)
T PLN02590 376 DALKTNPEYLEFKVSKKDTVVNYKDWQISLSR-RFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT 454 (539)
T ss_pred HHhhcCHHHhCCcccccccCCCccccCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 32211 000 011111 2233333444443 567789999999999999999999888767776
Q ss_pred CCccEEEEeeCCCCCCC-------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
++.-+.+++++.....+ ..++.+++. +.|..........+..++|++++. +++++++.+++.|.+...++
T Consensus 455 ~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~-~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 455 TRYFSLVCFRLAPVDGDEDQCNERNRELLAAVN-STGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred CCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 65466677776432111 235566665 455555444444455689999877 67889999999999988777
Q ss_pred hcc
Q 015890 385 VKD 387 (398)
Q Consensus 385 ~~~ 387 (398)
.++
T Consensus 534 ~~~ 536 (539)
T PLN02590 534 TRN 536 (539)
T ss_pred ccc
Confidence 653
No 318
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.88 E-value=1.8e-19 Score=166.01 Aligned_cols=290 Identities=23% Similarity=0.220 Sum_probs=194.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEE
Q 015890 62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTH 137 (398)
Q Consensus 62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~ 137 (398)
+.|+.. .....+.+.+.+..+.+. +.++++++|..|+..++.+++++||+|+++...|.+....+ ...|+++
T Consensus 47 ~~Y~R~--gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v 122 (386)
T PF01053_consen 47 YIYSRY--GNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEV 122 (386)
T ss_dssp CSBTTT--C-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEE
T ss_pred cceecc--ccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEE
Confidence 445432 244555555555555553 67888999999999999999999999999999998866544 4579998
Q ss_pred EEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEeece-eccCCCccc
Q 015890 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTY-FMYDGRKHC 215 (398)
Q Consensus 138 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~livDe~~-~~~~~~~~~ 215 (398)
.++ +. -|++++++++++++ ++|+++.|.||+..+.+ |++|+++|+++| +++++|.++ .++.- .
T Consensus 123 ~~~-d~------~d~~~l~~~l~~~t--~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~---~ 187 (386)
T PF01053_consen 123 TFV-DP------TDLEALEAALRPNT--KLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ---N 187 (386)
T ss_dssp EEE-ST------TSHHHHHHHHCTTE--EEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----
T ss_pred EEe-Cc------hhHHHHHhhccccc--eEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee---c
Confidence 887 32 27899999999865 99999999999999999 999999999998 999999988 33211 1
Q ss_pred cccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890 216 CVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294 (398)
Q Consensus 216 ~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 294 (398)
+...+.++++.|++|.++- ...-.|.++.++. +++.+.+.........+.++...+.+...++. +.-+.+++.+
T Consensus 188 pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~-~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T----l~~R~~~~~~ 262 (386)
T PF01053_consen 188 PLELGADIVVHSATKYLSGHSDVMGGAVVVNGS-SELYDRLREFRRLLGATLSPFDAWLLLRGLRT----LPLRMERQNE 262 (386)
T ss_dssp GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSH-HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT----HHHHHHHHHH
T ss_pred cCcCCceEEEeeccccccCCcceeeEEEEECch-hhhhhhhcchhhhcCccchHHHHHHHhcCCCc----HHHHHHHHHH
Confidence 2223455889999999952 2244678876632 46777777666655666777777777777765 6777888889
Q ss_pred HHHHHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CCCC--
Q 015890 295 NREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGAC-- 352 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~~-- 352 (398)
++..+.+.|++++.++ |+.| ..+-.+.+.+.. ..+.+.+++++-.+.... |...
T Consensus 263 nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~----~~~~~~~f~~~l~l~~~~~SlGg~~SL 338 (386)
T PF01053_consen 263 NAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG----GEEAARRFLDALKLFSIAPSLGGVESL 338 (386)
T ss_dssp HHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS----HHHHHHHHHHH-SSSEESSS-SSSS-E
T ss_pred HHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc----chhhhHhHHhhhhhHhhhhhcCCcccc
Confidence 9999999999887643 3332 122356667763 223444455555544211 1110
Q ss_pred --------C-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 353 --------G-------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 353 --------~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
. .++.||+|++- |+.+.+++.|.++++
T Consensus 339 i~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 339 ISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp EEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred cccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 0 13679999997 777888888888874
No 319
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1e-19 Score=171.55 Aligned_cols=283 Identities=19% Similarity=0.192 Sum_probs=185.6
Q ss_pred CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~ 144 (398)
...++++.++++. |. +..++++++++|+..++.+++++||+|+++.+.|.+.. ..++..|++++.+ +.+
T Consensus 64 ~~~~le~~lA~l~----g~--~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~ 136 (427)
T PRK05994 64 TNAVLEERVAALE----GG--TAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA-DAD 136 (427)
T ss_pred cHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEE-CCC
Confidence 3455666666654 53 34778888999999999999999999999999998643 3457789998888 432
Q ss_pred CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i 223 (398)
|++.+++++++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|+++ .++...+ ...+.++
T Consensus 137 ------d~~~l~~ai~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~p---l~~gaDi 202 (427)
T PRK05994 137 ------DPASFERAITPRT--KAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIRP---IEHGADI 202 (427)
T ss_pred ------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCCc---cccCCcE
Confidence 7889999998765 99999999999999999 899999999999999999999 4432222 2234558
Q ss_pred EEcccccccCCCcceeEEEEcc-CCcH---------------H-----HHHHHH----------HhhccCCCCcchHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYP-SEVE---------------G-----FATQLL----------KVQDNIPICASIISQH 272 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~-~~~~---------------~-----~~~~l~----------~~~~~~~~~~~~~~~~ 272 (398)
++.|++|.+|.+|-.+|.++.. ..+. . +.+.+. .........+++...+
T Consensus 203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~ 282 (427)
T PRK05994 203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF 282 (427)
T ss_pred EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence 8999999998655445544432 1000 0 111100 0111223345555555
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChHHH
Q 015890 273 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEV 334 (398)
Q Consensus 273 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~ 334 (398)
.+...|+. +..+.++..+++..+.+.|+++|.+. +..| . .+-.+.+++.. ..+.
T Consensus 283 l~~~~l~t----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~----~~~~ 354 (427)
T PRK05994 283 LILTGIET----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG----GYEA 354 (427)
T ss_pred HHHcCccc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC----CHHH
Confidence 55555544 67777888888888999998877632 2221 1 13345555542 2233
Q ss_pred HHHHHHhcCeEE---ecCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 335 VRWLAHRHGVVV---IPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 335 ~~~ll~~~gi~v---~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
..+++++-.+.. .-|... + .++.||+|++- |+.+.+++.|.+++.+
T Consensus 355 ~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~dl~~Al~~ 426 (427)
T PRK05994 355 GVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI---EDVDDIIADLEQALAK 426 (427)
T ss_pred HHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhh
Confidence 444544444332 112111 0 13579999997 6677788888888763
No 320
>PRK06149 hypothetical protein; Provisional
Probab=99.87 E-value=1.9e-19 Score=185.48 Aligned_cols=344 Identities=13% Similarity=0.044 Sum_probs=220.5
Q ss_pred HcCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
.+|+.|+||..|...++ .+|++.+++.+++....... ....+....+++.+....+-..+.+++++||++|++.+
T Consensus 582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~----~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~A 657 (972)
T PRK06149 582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS----RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLA 657 (972)
T ss_pred CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc----cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 35889999998776566 78999999999987532211 11123445566666554433346899999999999999
Q ss_pred HHHhc--cCCCEEEEeCCCCcChhhHHHhc-C-----c--------EEEEeccCCC-CC--CC-CC-----hHHHHHhhc
Q 015890 106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-----V--------THILVGPCSS-KT--LH-PD-----ADWLEKTLE 160 (398)
Q Consensus 106 ~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~-~~--~~-~d-----~e~l~~~l~ 160 (398)
++... ....+|+....+|++....+-.. + . .+..+ +.+. .. +. .+ .+++++.++
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 736 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPV-ESPNTYRGRFRGADSAADYVRDVVAQLE 736 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEe-CCCcccCCcCCCcccHHHHHHHHHHHHH
Confidence 99543 22368999999999866332111 0 0 01112 1111 00 11 11 234444332
Q ss_pred ----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEccccccc
Q 015890 161 ----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 161 ----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~ 232 (398)
....+++|+++..+...|. ..+++.++++.++|++||+++|+||++ |+..|... .....+....+.+++|.+
T Consensus 737 ~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~l 816 (972)
T PRK06149 737 ELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGM 816 (972)
T ss_pred HHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccc
Confidence 2334688888866666665 567889999999999999999999999 65555422 111111122233889999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHh-hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
| .|+++|+++++ +++.+.+... ....+++.|+.+.+++.+.|+..+ +..++..+.-...++.|.+..++.+.+
T Consensus 817 g-~G~Pl~av~~~---~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i 892 (972)
T PRK06149 817 G-NGHPLGAVITR---REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLI 892 (972)
T ss_pred c-CCeeeEEEEEc---HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8 88999999999 7887776531 112356788999999999887522 233333344444555666555556655
Q ss_pred ccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
..+... |.++.+.+.... .....++..++ ++||++.+... ..+.+||.... .+++++++++++|.+++
T Consensus 893 ~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 893 GAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDRVL 968 (972)
T ss_pred EEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 555566 677777663211 01234666665 78999987521 13679998775 79999999999999998
Q ss_pred HH
Q 015890 382 EE 383 (398)
Q Consensus 382 ~~ 383 (398)
.+
T Consensus 969 ~~ 970 (972)
T PRK06149 969 TE 970 (972)
T ss_pred Hh
Confidence 65
No 321
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.87 E-value=2.5e-19 Score=169.54 Aligned_cols=342 Identities=13% Similarity=0.081 Sum_probs=209.0
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHH--HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAME--KVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQA 101 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~--a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a 101 (398)
+|+.|+||..|. ..++ .+|++.+ ++.+++.+-............+....+++.+.+.. +...+.|++++||++|
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA 122 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA 122 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence 688999998764 3333 5899999 99988864210000010111233344555554443 2224689999999999
Q ss_pred HHHHHHHhc----------c---C-CCEEEEeCCCCcChhhHHHhcC-cEEE---Eec-------cCCCC-----CCC--
Q 015890 102 FVNIVLTLC----------D---A-GDSVVMFAPYYFNSYMSFQMTG-VTHI---LVG-------PCSSK-----TLH-- 149 (398)
Q Consensus 102 ~~~~~~~l~----------~---~-gd~Vl~~~p~~~~~~~~~~~~g-~~~~---~~~-------~~~~~-----~~~-- 149 (398)
++.+++... . + ..+|+....+|++....+-... .... ... +.+.. +..
T Consensus 123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK08297 123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE 202 (443)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence 999999873 1 1 2579999999999765443322 1100 000 00000 000
Q ss_pred -------CChHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc
Q 015890 150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE 218 (398)
Q Consensus 150 -------~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~ 218 (398)
-+++.+++.+. ....+++|+++..+...|.+ .|++.+++|.++|++||+++|.||++ |+..|.......
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~ 282 (443)
T PRK08297 203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ 282 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence 02345566665 22337889998777777774 78889999999999999999999999 666654322111
Q ss_pred CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH-----HhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHH
Q 015890 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL-----KVQDNIPICASIISQHLALYSLQT--GPEWVTERVKD 291 (398)
Q Consensus 219 ~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~ 291 (398)
.+....+.+++|.++ +|.++.. +++.+... ......+++.++.+.+++.+.|+. .++.+++..+.
T Consensus 283 ~gv~PDiv~~gK~l~-----~~a~l~~---~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~ 354 (443)
T PRK08297 283 LGVRPDIVAFGKKTQ-----VCGIMAG---RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ 354 (443)
T ss_pred cCCCCCEEEeccccc-----ccceecc---hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 111122336789874 2344444 23222111 112345677888999888888874 22334444444
Q ss_pred HHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 292 LVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
....++.+.+..++.+.+. .+.+. |.++.+.++.. .....++..++ ++||++.++. ...+|++++. .++++
T Consensus 355 g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gvl~~~~~----~~~lr~~P~l~~t~~e 427 (443)
T PRK08297 355 GEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTT-ADRDEVIRRLW-EEGVLVLPCG----ERSIRFRPALTVTTEE 427 (443)
T ss_pred HHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCH-HHHHHHHHHHH-HCCEEEecCC----CCeEEEECCccCCHHH
Confidence 4555555655555555432 33455 67777777532 12346677665 8999998752 3579997666 79999
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLEEL 384 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~ 384 (398)
+++++++|.+++.++
T Consensus 428 id~~l~~l~~~l~~~ 442 (443)
T PRK08297 428 IDAAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998765
No 322
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=5.4e-19 Score=164.17 Aligned_cols=304 Identities=22% Similarity=0.278 Sum_probs=206.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCc
Q 015890 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYF 124 (398)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~ 124 (398)
.+.++++.+.+.+++...+ .....++++.++++++ .+.++.++++|.|+.+++.++ +++||+|+++..++.
T Consensus 5 ~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~ 76 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFG------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP 76 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHT------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred HHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhC------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence 5667777777776543322 4555788888888884 578999999999999999998 488999999999999
Q ss_pred ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 125 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
.....+...|++++++ +++++.+.+|++.+++++++++ ++|++.+ ..|...+ +.+|.++|+++|+++|.|.
T Consensus 77 ~~~~ai~~~G~~pv~~-Di~~~~~~id~~~~~~~i~~~t--~ai~~~h---~~G~~~d---~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 77 ATASAILWAGAEPVFV-DIDPETLNIDPEALEKAITPKT--KAILVVH---LFGNPAD---MDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp HHHHHHHHTT-EEEEE--BETTTSSB-HHHHHHHHHTTE--EEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-
T ss_pred HHHHHHHHhccEEEEE-eccCCcCCcCHHHHHHHhccCc--cEEEEec---CCCCccc---HHHHHHHHHHcCCcEEEcc
Confidence 9999999999999999 9998889999999999999887 9998775 4566666 9999999999999999999
Q ss_pred ce-e--ccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------C
Q 015890 205 TY-F--MYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-----------------I 262 (398)
Q Consensus 205 ~~-~--~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-----------------~ 262 (398)
++ + .+.|...... ++ +.++|| +|.++ .-..|++++++ +++.+++..++.. .
T Consensus 148 a~a~g~~~~g~~~G~~-gd--~~~fSf~~~K~i~--~geGG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 220 (363)
T PF01041_consen 148 AQAFGARYKGRPVGSF-GD--IAIFSFHPTKIIT--TGEGGAVVTND--PELAERARALRNHGRSRDAFRRYRHELPPGY 220 (363)
T ss_dssp TTTTT-EETTEETTSS-SS--EEEEESSTTSSS---SSS-EEEEEST--HHHHHHHHHHTBTTEETSECSTTEESSSS--
T ss_pred ccccCceeCCEeccCC-CC--ceEecCCCCCCCc--CCCCeeEEecH--HHHHHHhhhhhccCcCccccccccccccCCc
Confidence 99 4 3344333322 33 445555 68884 22358888887 7888887765431 2
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc----E-EEEeeCCCCC-CChHHHH
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----I-YLWARLPEKH-LDDFEVV 335 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~----~-~~~~~~~~~~-~~~~~~~ 335 (398)
.+.++.+..+.+...|+. +++..+.-+++.+.+.+.|.+.+.+.... +.+. + .+.+.++... .+..++.
T Consensus 221 n~rm~~~~AAigl~QL~~----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~ 296 (363)
T PF01041_consen 221 NFRMSELQAAIGLAQLKR----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELV 296 (363)
T ss_dssp B-B-BHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHH
T ss_pred ccccHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHH
Confidence 234555555555666654 56666667778888889998887643322 2211 1 2344444321 2466777
Q ss_pred HHHHHhcCeEEecCCC-C-C------C----------------CCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 336 RWLAHRHGVVVIPGGA-C-G------C----------------RGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~-~-~------~----------------~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
+.| ++.||.+.+... + . . ...+-+-+.. .++++++..++.|+
T Consensus 297 ~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 297 EAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 776 588999987662 1 0 0 1246666555 78888888887764
No 323
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=1.2e-19 Score=170.80 Aligned_cols=338 Identities=9% Similarity=0.001 Sum_probs=204.1
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHh-hcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKEL-VWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~-~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
.+|+.|+||..|.. .++ .+|.+.+|+.++ ..... ...+ ......++.+.+.+.+.+..+.+.+.+++++|+++
T Consensus 55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE 133 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD 133 (464)
T ss_pred CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence 46889999998753 333 689999999974 22211 1112 11112223333333222333323468999999999
Q ss_pred HHHHHHHHhcc--------------------------CC---CEEEEeCCCCcChhhHHHhc-CcE-----------EEE
Q 015890 101 AFVNIVLTLCD--------------------------AG---DSVVMFAPYYFNSYMSFQMT-GVT-----------HIL 139 (398)
Q Consensus 101 a~~~~~~~l~~--------------------------~g---d~Vl~~~p~~~~~~~~~~~~-g~~-----------~~~ 139 (398)
|++.+++.... +| .+|+....+|++....+-.. |.. ...
T Consensus 134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~ 213 (464)
T TIGR00699 134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ 213 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence 99999997631 11 27999999999876544322 111 111
Q ss_pred eccCCCC--CC-----------CCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEee
Q 015890 140 VGPCSSK--TL-----------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 140 ~~~~~~~--~~-----------~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe 204 (398)
+ |.+.. .+ .-+++.+++.++. ...+++|+++..+...|.+. +++.++++.++|++||+++|+||
T Consensus 214 ~-p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE 292 (464)
T TIGR00699 214 A-PFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE 292 (464)
T ss_pred c-CCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 1 11110 00 0135667777752 23378999997777788865 78899999999999999999999
Q ss_pred ce--eccCCCccccccCCcE--EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC
Q 015890 205 TY--FMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 280 (398)
Q Consensus 205 ~~--~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 280 (398)
++ |+..|........+.. ..+.+++|.+|..| +++.. + .+..........+++.++.+.+++.+.|+.
T Consensus 293 V~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG----~~~~~---~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~ 364 (464)
T TIGR00699 293 VQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAG----YFFHD---P-AFRPNKPYRQFNTWMGDPSRALILREIIQE 364 (464)
T ss_pred eeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCC----ccccc---h-hccCCCCcccccCCCCCHHHHHHHHHHHHH
Confidence 99 6554532222111111 22457789995234 33333 2 211111222345677888888888888765
Q ss_pred C--chHHHHHHHHHHHHHHHHHHHhccCC-CCcccc--CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCC
Q 015890 281 G--PEWVTERVKDLVRNREIIREALSPLG-EGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 355 (398)
Q Consensus 281 ~--~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 355 (398)
. ++.+.+..+.-...++.+.+..++++ .+..+. +. +.++.+.++.. .....+...++ ++|+++.+. ..
T Consensus 365 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~gie~~~~-~~~~~i~~~~~-~~Gvl~~~~----g~ 437 (464)
T TIGR00699 365 IKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIAWDTPDE-AKRDKLLKKAR-NNGVNIGGC----GV 437 (464)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEEEecCCH-HHHHHHHHHHH-HCCcEEecC----CC
Confidence 2 23333333334444555555444555 333333 44 77777777532 12345666665 789999764 34
Q ss_pred CeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 356 GHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 356 ~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+.|||.+.. .+++|+++++++|.+++
T Consensus 438 ~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 438 KAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 789999887 79999999999998763
No 324
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.86 E-value=4.8e-19 Score=165.02 Aligned_cols=302 Identities=17% Similarity=0.118 Sum_probs=199.9
Q ss_pred cHHHHHHHHHHHhhhcCCCC-CcEEEecChH-HHHHHHHHHhcc---CCCEEEEeCCCCcChhhHHHhcCcEEEEecc--
Q 015890 70 LPELRDALVKKLNQENKLYK-SSVMVTAGAN-QAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQMTGVTHILVGP-- 142 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t-~a~~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-- 142 (398)
...+.+.+.+.+.+..|++. +..++++|+| .++.+++.++.. +||.|+++..+|.+...++...|++++.+ +
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~V-d~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVI-ETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEe-eee
Confidence 45666677777777778753 4588888888 588877777652 58999999999999999999999999999 6
Q ss_pred CCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC-cc--ccc
Q 015890 143 CSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR-KH--CCV 217 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~-~~--~~~ 217 (398)
.+++++.+|++.|++++++.+ +..++++.+|+ |+.....+++++|+++|++||+++|+|++| +..... .. ...
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~ 259 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAI 259 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccc
Confidence 456778999999999998533 24566665554 333333444999999999999999999999 322110 00 111
Q ss_pred cC-CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890 218 EG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296 (398)
Q Consensus 218 ~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (398)
.. ..++++.|++|.+.++|. .|.++.++ +++++.+..... ....+.+.+.+...++..+.+.++++.++..+++
T Consensus 260 ~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d--~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a 334 (444)
T TIGR03531 260 KVGRVDAVVSSTDKNFMVPVG-GAIIYSFD--ENFIQEISKSYP--GRASASPSLDVLITLLSLGSKGYLELLKERKEMY 334 (444)
T ss_pred cccCCCeEEEeCccCCCCCCC-EEEEEECC--HHHHHHHHHhcc--CCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 11 125778899999987765 34454655 788887765433 2234456777777777767788888888888888
Q ss_pred HHHHHHhccC----CCCcccc-CCccEEEEeeCCCC-CCChHHHHHHHHHhcCeE----EecCC-------CC---CC--
Q 015890 297 EIIREALSPL----GEGAVKG-GEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV----VIPGG-------AC---GC-- 354 (398)
Q Consensus 297 ~~l~~~l~~~----~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~----v~~g~-------~~---~~-- 354 (398)
+.+.+.|+++ +. ++.. +.+..-+.+.+... ..+...+-..| -.++|. |.++. .| +.
T Consensus 335 ~~l~~~L~~l~~~~~~-~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l-~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~ 412 (444)
T TIGR03531 335 KYLKELLQKLAERHGE-RLLDTPENPISSAMTLSTLKGKDPTMLGSML-YSRRVTGPRVVTNGDSKTVGGCEFKGYGSHT 412 (444)
T ss_pred HHHHHHHHHHHHhhCc-EeecCCCCceeEEEecccccccCHHHHHHHH-HhCCCCCceeecCCCceEECCEEeecccccc
Confidence 8888877753 33 4443 33334444444321 11344444444 355552 23443 12 11
Q ss_pred ----CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 355 ----RGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 355 ----~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
..++-++.+- .+.+|++.++++|.+++
T Consensus 413 ~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 413 SNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 1244444333 68999999999998763
No 325
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.1e-19 Score=167.64 Aligned_cols=282 Identities=16% Similarity=0.138 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCC
Q 015890 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSK 146 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~ 146 (398)
..+++.++++. |. +..++++++++|+.+++.+++++||+|+++...|.+.. ..++..|++++++ + +.
T Consensus 72 ~~le~~la~l~----g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-~~- 142 (437)
T PRK05613 72 EALENRIASLE----GG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFV-E-NP- 142 (437)
T ss_pred HHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEE-C-CC-
Confidence 44555555544 54 34555555668998989888999999999999998763 4457789999988 5 22
Q ss_pred CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~ 225 (398)
.|++.+++.+++++ ++|++.++.||+|.+.| +++|+++|+++|+++|+|.++ .+..- .....+.++++
T Consensus 143 ---~d~e~l~~~l~~~t--k~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~---~p~~~GaDivv 211 (437)
T PRK05613 143 ---DDPESWQAAVQPNT--KAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALV---RPLELGADVVV 211 (437)
T ss_pred ---CCHHHHHHhCCccC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccccc---ChHHhCCCEEE
Confidence 17899999998775 89999999999999999 999999999999999999998 43211 11122346889
Q ss_pred cccccccCCCcceeE-EEEccCCc--------------------------------HHHH-HHHHHhhccCCCCcchHHH
Q 015890 226 FSFSKAYGMMGWRVG-YIAYPSEV--------------------------------EGFA-TQLLKVQDNIPICASIISQ 271 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G-~i~~~~~~--------------------------------~~~~-~~l~~~~~~~~~~~~~~~~ 271 (398)
.|++|.++..|--+| .++.+... +.+. +...........+.++...
T Consensus 212 ~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a 291 (437)
T PRK05613 212 ASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNA 291 (437)
T ss_pred eeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 999999975554444 44433110 0000 1111222334556677777
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccC----------------C-ccEEEEeeCCCCCCChHH
Q 015890 272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG----------------E-GAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~----------------~-~~~~~~~~~~~~~~~~~~ 333 (398)
+.+...|+. +.-+.++..+++..+.+.|+++|.+ +|..| . .|-.+.+.+.. +.+
T Consensus 292 ~l~~rgl~T----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~----~~~ 363 (437)
T PRK05613 292 WVTAQGLDT----LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKG----GKD 363 (437)
T ss_pred HHHHcccCc----HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecC----CHH
Confidence 666666654 6777788889999999999988763 22211 1 13345556642 223
Q ss_pred HHHHHHHhcCeEEec---CCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIP---GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~---g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
...+++++-.+.... |... + .++.||+|++- |+.+.+++.|.+++++
T Consensus 364 ~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 364 EAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI---EDIDDIIADLEGGFAA 436 (437)
T ss_pred HHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 333444444443221 1100 0 13579999997 6777888888888764
No 326
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.86 E-value=2.8e-18 Score=157.71 Aligned_cols=321 Identities=13% Similarity=0.094 Sum_probs=217.1
Q ss_pred HHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCc
Q 015890 46 KMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124 (398)
Q Consensus 46 ~~v~~a-~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~ 124 (398)
+.+.++ +...+..+ -.|..++...++++.+++++ | .+.++.++++|.|++.+....+++||.| +.+.|+
T Consensus 50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~----G--~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f 119 (450)
T TIGR02618 50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELY----G--FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYF 119 (450)
T ss_pred HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHH----C--CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeH
Confidence 566665 55444332 24888888899999999998 3 4579999999999998877778999977 677775
Q ss_pred ChhhH-HHhcCcEEEEeccCC---------CCCCCCChHHHHHhhccCC--CCeEEEEeCCCCC-CccCCCHHHHHHHHH
Q 015890 125 NSYMS-FQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVVNPGNP-SGTYIPERLLKRISD 191 (398)
Q Consensus 125 ~~~~~-~~~~g~~~~~~~~~~---------~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~np-tG~~~~~~~l~~i~~ 191 (398)
..... ....|...+-+ +.+ +..+.+|++.|++.+++.. ..++|++++++|. .|..++.++++++.+
T Consensus 120 ~Tt~ahIe~~Gav~vDi-~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~e 198 (450)
T TIGR02618 120 TTTRYHQEKNGATFVDI-IIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRE 198 (450)
T ss_pred HHHHHHHHhCCeEEEee-ecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHH
Confidence 54443 67788865555 333 3346789999999998532 2357788877775 489999999999999
Q ss_pred HHHHcCCEEEEeece-ec-----------cCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 192 LCKAAGSWLVVDNTY-FM-----------YDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~-----------~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+|++||+.+|.|.++ +. +.+.+... .....+.++.|..|.++.+- .|+++.++ +++++++
T Consensus 199 lA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d--~~l~~k~ 274 (450)
T TIGR02618 199 LCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI--GGFLCMND--DEMFQSA 274 (450)
T ss_pred HHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC--ceEEEeCC--HHHHHHH
Confidence 999999999999999 41 11111100 00112357889999887551 27777676 8888888
Q ss_pred HHhhccC----CC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---
Q 015890 256 LKVQDNI----PI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK--- 327 (398)
Q Consensus 256 ~~~~~~~----~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--- 327 (398)
+...... ++ ..+...+.+++..|++.. -+.+.++-....++|.+.|.+.|. .+..|.+++.++++..+.
T Consensus 275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~--~~~y~~~r~~~a~~La~~L~~~Gv-pv~~p~ggh~V~vda~~~lph 351 (450)
T TIGR02618 275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREAV--DYEYIEHRVKQVRYLGDKLKAAGV-PIVEPVGGHAVFLDARRFLPH 351 (450)
T ss_pred HHHhhhcCCccccCchhhhhHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCcceEEEEhHHhCCC
Confidence 7764322 11 223334455555555411 123333444457778888877755 556677788888865321
Q ss_pred ----CCChHHHHHHHHHhcCeEEecCCCC--CC-----------CCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 328 ----HLDDFEVVRWLAHRHGVVVIPGGAC--GC-----------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 328 ----~~~~~~~~~~ll~~~gi~v~~g~~~--~~-----------~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
.-....+..+|-.+.||.-.--..+ +. -..+|+++.+ -|.++++...+++....++-
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 1135567777777889876443322 11 1479999888 58889999999998887663
No 327
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.86 E-value=1e-18 Score=158.81 Aligned_cols=281 Identities=25% Similarity=0.233 Sum_probs=191.0
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCC
Q 015890 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTL 148 (398)
Q Consensus 73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~ 148 (398)
.++.+.+.+..+.| .+..+.+++|.+|+..++.+++++||+|+++...|.+.. ..++.+|+++.++ +..
T Consensus 64 T~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~-d~~---- 136 (396)
T COG0626 64 TRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV-DPG---- 136 (396)
T ss_pred cHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE-CCC----
Confidence 33444444433333 567888999999999999999999999999999997754 3457788999887 221
Q ss_pred CCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890 149 HPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 149 ~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~ 226 (398)
+.+.+++++. +++ ++|++++|+||+..+.+ |.+|+++|+++|+++|+|+++ -++ -.. +...+.+|++.
T Consensus 137 --~~~~~~~~~~~~~t--k~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~-~q~--PL~~GaDIVvh 206 (396)
T COG0626 137 --DDEALEAAIKEPNT--KLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPV-LQR--PLELGADIVVH 206 (396)
T ss_pred --ChHHHHHHhcccCc--eEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccc-ccC--hhhcCCCEEEE
Confidence 4456666666 455 99999999999999999 999999999999999999999 222 111 12223559999
Q ss_pred ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890 227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304 (398)
Q Consensus 227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 304 (398)
|.+|.++- .-.=.|.+++++ +++.+.+..... ......++...+.+...++. +.-+.+++.+++..+.+.|+
T Consensus 207 SaTKyl~GHsDvl~G~v~~~~--~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~nA~~IA~~L~ 280 (396)
T COG0626 207 SATKYLGGHSDVLGGVVLTPN--EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----LALRMERHNENALKIAEFLA 280 (396)
T ss_pred eccccccCCcceeeeEEecCh--HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHh
Confidence 99999962 224467666664 556665533322 24555666666666666654 67777888889999999999
Q ss_pred cCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC----------C-
Q 015890 305 PLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----------G- 353 (398)
Q Consensus 305 ~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----------~- 353 (398)
+.+.+ +|+.|. .+-.+.+.+..+ +.+.+++++-.+.. .-|... +
T Consensus 281 ~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-----~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~ 355 (396)
T COG0626 281 DHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHA 355 (396)
T ss_pred cCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-----HHHHHHHHhCCccEEeccCCCcccccccccccCcc
Confidence 87763 344432 244455666532 33333443334333 222111 0
Q ss_pred ------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 354 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 354 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.++-||+|++- |+.+.+++.|.+++..+
T Consensus 356 ~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 356 SIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred cCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 14689999997 77777888888887754
No 328
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=7.9e-19 Score=162.39 Aligned_cols=316 Identities=12% Similarity=0.055 Sum_probs=203.6
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEe-cChHHHHHHHHHHhccCCCEEEE
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVT-AGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~-~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
|...||++++++....... ....+.+..+.++.+...+.+.+++++++ .+|+++ +|+|.+++.++.+++.+ +.+.+
T Consensus 11 P~~~~~~v~~a~~~~~~~~-~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i 88 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASL-FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL 88 (361)
T ss_pred CcCCCHHHHHHHHhcCccc-cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence 6668899999987542110 10112334445565566666666667754 478876 66999999999999743 33333
Q ss_pred eCCCCc-ChhhHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 119 FAPYYF-NSYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 119 ~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
....|. .+.+.++.. +.++..+ +.+. +..++. .++++ +++|++++..|.||+..| +++| +++
T Consensus 89 ~~G~~~~~~~~~a~~~~~~~~~~~~-~~~~-~~~~~~-----~~~~~--~~lV~~~h~et~tG~~~p---i~~I---~~~ 153 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAPWLGEPIIV-TADP-GSAPEP-----QADPG--VDVIAWAHNETSTGVAVP---VRRP---EGS 153 (361)
T ss_pred ecCHHHHHHHHHHHhhhccCCceEE-ecCC-CCCCCC-----ccCCC--CCEEEEcccCCccceecc---cccc---ccc
Confidence 344442 244444442 2255555 4432 222332 23343 599999999999999999 5555 478
Q ss_pred cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890 196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------------- 259 (398)
Q Consensus 196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~--------------- 259 (398)
+|+++++|.++ ++....... . .+++++|.+|++|++| .++.++.+ +++++++....
T Consensus 154 ~g~~~iVDavqs~g~~~idv~--~--~D~~~~s~~K~lg~~~-Gl~~~~~s---~~~~~~~~~~~~~~~~~p~~~d~~~~ 225 (361)
T TIGR01366 154 DDALVVIDATSGAGGLPVDIA--E--TDVYYFAPQKNFASDG-GLWLAIMS---PAALERIEAIAASGRWVPEFLSLPTA 225 (361)
T ss_pred CCCeEEEEcCccccCCCCCHH--H--CCEEEEEchhhcCCCC-ceEEEEEC---HHHHhhhhcccCCCCCCchhhhHHHH
Confidence 99999999999 666443332 1 3478899999998764 24555666 55555543210
Q ss_pred ------ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCcccc-CC---ccEEEEeeCCCC
Q 015890 260 ------DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG-GE---GAIYLWARLPEK 327 (398)
Q Consensus 260 ------~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~---~~~~~~~~~~~~ 327 (398)
..++++++.....++.++++... . .++...++++++.+++++.+.+.+..+.+. .. ......+.++++
T Consensus 226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g 305 (361)
T TIGR01366 226 VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDD 305 (361)
T ss_pred HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCc
Confidence 12345566665656666766422 2 256777888899999999999888644442 11 122234555543
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+..++...| +++||.+.++......+.+|+|+.. .+.+|+++++++|++++++
T Consensus 306 -~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 306 -IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred -cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 4677788877 5789999876533335789999988 8999999999999998765
No 329
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.1e-18 Score=153.71 Aligned_cols=340 Identities=15% Similarity=0.107 Sum_probs=218.8
Q ss_pred HcCCCeEEcCCccC--CC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
.+|+.|+||..+-- .. ...|++.+++.+++.+-. ...|...+ .-++.+.+.+.+. ....+.|.+++++|+|
T Consensus 53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~---~~~~~rvff~nsGTeA 128 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLG---KGSAERVFFCNSGTEA 128 (433)
T ss_pred CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhccc---CCCccEEEEecCCcHH
Confidence 47899999987542 22 148999999999987632 22232222 3334444444432 2367899999999999
Q ss_pred HHHHHHHhccC------C--CEEEEeCCCCcChhhHH-HhcCcEEEEeccC----CCCC--CCCChHHHHHhhccCC-CC
Q 015890 102 FVNIVLTLCDA------G--DSVVMFAPYYFNSYMSF-QMTGVTHILVGPC----SSKT--LHPDADWLEKTLETKP-TP 165 (398)
Q Consensus 102 ~~~~~~~l~~~------g--d~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~----~~~~--~~~d~e~l~~~l~~~~-~~ 165 (398)
++.++....+. - .+++....+|++-...+ ...+...... |. ++.. ..-|.+++++.++.++ .+
T Consensus 129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~-~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~I 207 (433)
T KOG1401|consen 129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL-PFDPIAPDVVTAEYNDSTALEKLFESHKGEI 207 (433)
T ss_pred HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC-CCCCCCCceeecccCCHHHHHHHHHhCCCce
Confidence 99999986531 1 24999999998754333 2223222211 11 1110 1127899999998443 58
Q ss_pred eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEE
Q 015890 166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 242 (398)
Q Consensus 166 ~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i 242 (398)
.+|+++..+...|.+ .++|.+..|.++|+++|+++|.||++ |+..|......-.+-...+.++.|.++ .|+++|+.
T Consensus 208 aAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~-gGlPigA~ 286 (433)
T KOG1401|consen 208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLG-GGLPIGAT 286 (433)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhcc-CCceeEEE
Confidence 899999888888886 57888999999999999999999999 666554322211112233558899998 88999999
Q ss_pred EccCCcHHHHHHHHHhhc---cCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCc
Q 015890 243 AYPSEVEGFATQLLKVQD---NIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG 316 (398)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~ 316 (398)
+++ +++.+.+..... ..+++.++.+..++...++. . .++..+..+.....++.+.+.+.+.+....- ...
T Consensus 287 ~v~---~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~gr- 362 (433)
T KOG1401|consen 287 GVR---DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGR- 362 (433)
T ss_pred eeh---HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeee-
Confidence 999 688888865444 77888999999999999986 2 3566777777788888899988876651111 122
Q ss_pred cEEEEeeCCCC---CCChHHH----HHHHH---HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 317 AIYLWARLPEK---HLDDFEV----VRWLA---HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 317 ~~~~~~~~~~~---~~~~~~~----~~~ll---~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
++++.+.+... ..+.... ...+. .+.|++++|-. -+++. .++|.++++++++.+.+.++.
T Consensus 363 gl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~-~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 363 GLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVE-HTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred EEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccc--------ccccc-CcHHHHHHHHHHHHHHHHHhc
Confidence 34333333211 1111111 11111 12244444410 01122 357889999999999888764
No 330
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.85 E-value=8.6e-19 Score=153.22 Aligned_cols=337 Identities=15% Similarity=0.134 Sum_probs=225.2
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
++|+.|+|+-.|.. .++ .+|++.+++.+++..- ....| ..+...++.+.|.+.+ .-+-+.++|++|+++|
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~-~~~pi~~~Ae~L~s~~----P~~l~~vfF~nsGsEA 121 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGY-LNPPIHDLAEALVSKL----PGDLKVVFFVNSGSEA 121 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccc-cCCcHHHHHHHHHHhC----CCCceEEEEecCCchH
Confidence 46888999988763 222 6899999999988541 12334 3333445555555554 5455679999999999
Q ss_pred HHHHHHHhc--cCCCEEEEeCCCCcChhhHH-HhcCcEEEEe-------------ccCCCCC-CCCC---------hHHH
Q 015890 102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSF-QMTGVTHILV-------------GPCSSKT-LHPD---------ADWL 155 (398)
Q Consensus 102 ~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~-------------~~~~~~~-~~~d---------~e~l 155 (398)
++++++... ...-.|+....+|++..... -..|...... +|.+..+ |.-+ .+++
T Consensus 122 Nelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l 201 (442)
T KOG1404|consen 122 NELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKEL 201 (442)
T ss_pred HHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHH
Confidence 999998753 23347888888998765433 2222222211 0111101 0001 2445
Q ss_pred HHhhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890 156 EKTLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS 229 (398)
Q Consensus 156 ~~~l~---~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s 229 (398)
++.+. ..+ +++.+.+..+.-.|.+ +++-.+++..++|+++|.++|.||++ |+..|.-+.....+.+..+-|++
T Consensus 202 ~d~i~~~~~~~-vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA 280 (442)
T KOG1404|consen 202 EDLILYDGPET-VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA 280 (442)
T ss_pred HHHHHhcCCCc-eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHH
Confidence 55544 344 6788888888878886 67779999999999999999999999 88888666666677777788999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHH-HHHHHHHHHHhccC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDL-VRNREIIREALSPL 306 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-~~~~~~l~~~l~~~ 306 (398)
|.+| .|+++|.+++. +++.+-+.+-. ..++++.++.+.+++.+.|+. .++.+.++.... ....+.+.+...+.
T Consensus 281 KgiG-nG~Pl~AVvtt---~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h 356 (442)
T KOG1404|consen 281 KGIG-NGFPLGAVVTT---PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKH 356 (442)
T ss_pred hhcc-CCCcceeeecC---HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9998 88999999999 88888776655 667888899999888888875 223344443333 23345555555555
Q ss_pred CCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
+.+--+... |+++-+++-+.. .....+.++. +++|+.|--|..++. .+||+... .|.+|++.+++..
T Consensus 357 ~iIGdVRG~-GLm~GvE~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i~G~--vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 357 PIIGDVRGR-GLMLGVELVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGIHGN--VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred Cceeecccc-eeEEEEEEecccCCCCCcchHHHHHHHHHH-HHhCeeeecccccce--EEEecCCeeccHHHHHHHHHHH
Confidence 554445566 777766663221 1123445555 599999966554433 99999777 7999997666655
No 331
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=3.6e-18 Score=157.79 Aligned_cols=277 Identities=16% Similarity=0.184 Sum_probs=184.1
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 142 (398)
.+...++++.++++. + .+..+++++++.|+.+++.+++++||+|+++.+.|.+.. ..+...|++++++ +
T Consensus 63 ~P~~~~lE~~la~le----g--~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv-d 135 (384)
T PRK06434 63 NPTVQAFEEKYAVLE----N--AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI-D 135 (384)
T ss_pred ChhHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEE-C
Confidence 344455666666654 4 345788888889999999999999999999988775544 5567789999998 6
Q ss_pred CCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 143 CSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 143 ~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
.++ +.+. ++.. .+++|++.+|+||++.+.+ +++|+++|++++ +++|.++ .++.+.+.. .+
T Consensus 136 ~~~~~~~~---------l~~~-~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~~~pl~---~g 197 (384)
T PRK06434 136 TDRLNSLD---------FDPS-NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYNQNPLD---LG 197 (384)
T ss_pred CCChhhee---------ecCC-CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcccCCchh---cC
Confidence 543 2222 2222 2599999999999999988 999999999998 5679998 444333322 23
Q ss_pred cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|.+|.++.+| .-.|.++.++ +++.+++...........++...+.+...|+. +..+.++..+++..+
T Consensus 198 aDivv~S~tK~i~G~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----L~~R~~r~~~~a~~~ 271 (384)
T PRK06434 198 ADVVIHSATKYISGHSDVVMGVAGTNN--KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRMEKHNKNGMEL 271 (384)
T ss_pred CCEEEeecccccCCCCCceEEEEecCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----HHHHHHHHHHHHHHH
Confidence 4588999999996433 4467777765 66777766554334445555554444444443 677788888899999
Q ss_pred HHHhccCCCC-ccccCC----------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCC-----------C--
Q 015890 300 REALSPLGEG-AVKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGA-----------C-- 352 (398)
Q Consensus 300 ~~~l~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~-----------~-- 352 (398)
.+.|+.+|.+ +|+.|. .+..+.+.+.. .+.+.+++++-.+.. .-|.. .
T Consensus 272 a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-----~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~ 346 (384)
T PRK06434 272 ARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-----MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSS 346 (384)
T ss_pred HHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-----HHHHHHHHHhCCcceEccCCCCCCeeeECCCcccccc
Confidence 9999988764 333322 23445556642 233344544444332 11110 0
Q ss_pred ---------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 353 ---------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 353 ---------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+ .++.||+|++- |+.+.+++.|.+++.
T Consensus 347 ~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 347 LSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALS 383 (384)
T ss_pred CCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence 0 13579999997 677778888887764
No 332
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.84 E-value=2.5e-18 Score=162.60 Aligned_cols=338 Identities=14% Similarity=0.107 Sum_probs=202.0
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHH--HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAM--EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQA 101 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~--~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a 101 (398)
+|+.|+||..|. ..++ .+|.+. +++.+++.+.............+....+++.+.+..+ -..+.+++++||++|
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 789999998764 3333 578888 8988887653211111111112233344444444321 123679999999999
Q ss_pred HHHHHHHhcc--------C------CCEEEEeCCCCcChhhHHHhc-CcE-EE--Eec-------cCC-------CCCCC
Q 015890 102 FVNIVLTLCD--------A------GDSVVMFAPYYFNSYMSFQMT-GVT-HI--LVG-------PCS-------SKTLH 149 (398)
Q Consensus 102 ~~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~~~-g~~-~~--~~~-------~~~-------~~~~~ 149 (398)
++.+++.... . +.+|+....+|++....+-.. |.. .. ..+ +.+ .....
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 9999997641 1 368999999999876544322 211 00 000 000 00000
Q ss_pred -------CChHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc
Q 015890 150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE 218 (398)
Q Consensus 150 -------~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~ 218 (398)
-+++.+++.+. ....+++|+++..+...|.+ .+++.+++|.++|++||+++|+||++ ++..|.......
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~ 275 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ 275 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence 12444555664 22337899999777778875 67889999999999999999999999 666553322111
Q ss_pred C--CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH--HhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHH
Q 015890 219 G--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDL 292 (398)
Q Consensus 219 ~--~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~ 292 (398)
. ..+++ +++|.+. . .|++.... ..++..... ......+++.++...+++.+.|+.. .+..++..+..
T Consensus 276 ~gv~PDi~--~~gK~~~-~---~g~~~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g 348 (431)
T TIGR03251 276 LGVQPDIV--AFGKKTQ-V---CGIMAGRR-VDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG 348 (431)
T ss_pred cCCCCCEE--EecccCc-c---ceEEecch-HHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 1 12233 5788762 2 25554331 112222111 1123346677888888888888752 23334555555
Q ss_pred HHHHHHHHHHhccCC-CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890 293 VRNREIIREALSPLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC 370 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~ 370 (398)
.+..+.|.+..++.+ .+....+. +.++.+.++.. .....+...++ ++||++.+.. .+.+|++++. .+++|+
T Consensus 349 ~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gvl~~~~g----~~~lr~~P~l~~t~~ei 421 (431)
T TIGR03251 349 AHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPST-ADRDEVIRQLY-REGVLLLGCG----ERSIRFRPPLTVTREEI 421 (431)
T ss_pred HHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCH-HHHHHHHHHHH-hCCeEEecCC----CCeEEEECCccCCHHHH
Confidence 555666666545555 32233344 66667777532 12345677665 8999997742 3679998887 799999
Q ss_pred HHHHHHHHH
Q 015890 371 KAAADRLRR 379 (398)
Q Consensus 371 ~~~~~~l~~ 379 (398)
++++++|.+
T Consensus 422 d~~l~~l~~ 430 (431)
T TIGR03251 422 DAAIDAIRR 430 (431)
T ss_pred HHHHHHHHh
Confidence 999999875
No 333
>PLN02263 serine decarboxylase
Probab=99.84 E-value=5.3e-17 Score=151.11 Aligned_cols=293 Identities=11% Similarity=0.022 Sum_probs=209.3
Q ss_pred CcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 144 (398)
+..++++.+.+|+.++++.+++ .-++|+|||+++..++.+..+ +...|+++..+|++...+++.+|++++.+ |++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~V-p~d 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKV-DTL 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEe-ccC
Confidence 5688999999999999998653 368899999999999888764 23478889999999999999999999999 887
Q ss_pred CCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-----EEEEeece----eccC-CCc
Q 015890 145 SKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS-----WLVVDNTY----FMYD-GRK 213 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~-----~livDe~~----~~~~-~~~ 213 (398)
++ +.+|++.|++++..++ .|-+|+.+.++.++|.+-| +++|+++|+++|+ |++||.+| +++. ..+
T Consensus 209 ~~-g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 VS-GEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred CC-CcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 54 5899999999997443 2567777788999999999 9999999999997 99999999 2221 111
Q ss_pred cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCCCcchHHHHHHHHHhcC-CchHH
Q 015890 214 HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPICASIISQHLALYSLQT-GPEWV 285 (398)
Q Consensus 214 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~-~~~~~ 285 (398)
........+=+..+.||+++ ..+.+|.++.++ +....+.... .....+-+......+...|.. +.+.+
T Consensus 285 ~~df~~~vDSIsvD~HK~l~-~P~~cgvll~R~---~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~ 360 (470)
T PLN02263 285 KVTFKKPIGSVSVSGHKFVG-CPMPCGVQITRM---EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGF 360 (470)
T ss_pred ccCCCcCccEEEECCccccC-CCcCEEEEEEeh---hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHH
Confidence 11111122334568899986 667899998884 3333332111 111122222223344444443 56778
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890 286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 364 (398)
Q Consensus 286 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~- 364 (398)
.+..++..++++++.+.|++.+...+..|. .+.+.+.-+. ... . .+|..+.+ .++.+++++..
T Consensus 361 ~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~-s~~V~f~~p~----~~~-----~-~~gW~L~~-----~~~~~Hivvmph 424 (470)
T PLN02263 361 QKEVQKCLRNAHYLKDRLREAGISAMLNEL-SSTVVFERPK----DEE-----F-VRRWQLAC-----QGNIAHVVVMPS 424 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCC-ceEEEEecCc----hHH-----h-hcceEEcc-----CCCcEEEEEcCC
Confidence 999999999999999999988774555555 6666655431 111 1 35666655 24568998887
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015890 365 LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+.+.++++++.|++.......
T Consensus 425 v~~~~id~fi~DL~~~~~~~~~ 446 (470)
T PLN02263 425 VTIEKLDYFLKELVEKRSTWYP 446 (470)
T ss_pred CCHHHHHHHHHHHHHHHhhhhh
Confidence 6889999999999988876543
No 334
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.84 E-value=3.2e-17 Score=151.14 Aligned_cols=306 Identities=13% Similarity=0.088 Sum_probs=206.0
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEec
Q 015890 63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVG 141 (398)
Q Consensus 63 ~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~ 141 (398)
.|..++...++++.+++++ | .+.++.++++|.|+++++...+++||.| +..+|+..... ....|...+-+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l----G--~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi- 143 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY----G--FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDI- 143 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEee-
Confidence 4888888899999999998 4 3569999999999999877778999965 55555544333 56677754433
Q ss_pred c---------CCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec
Q 015890 142 P---------CSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM 208 (398)
Q Consensus 142 ~---------~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~ 208 (398)
. .++.++.+|++.|++.+++.+ .++++.+..++|.. |...|.++++++.++|++||+.+|.|.++ +.
T Consensus 144 ~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~g 223 (460)
T PRK13237 144 IIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVE 223 (460)
T ss_pred ecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhc
Confidence 2 123457899999999998542 23467777777877 78888899999999999999999999999 44
Q ss_pred -----------cCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----CC-Ccch
Q 015890 209 -----------YDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----PI-CASI 268 (398)
Q Consensus 209 -----------~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~----~~-~~~~ 268 (398)
|.+.+... ...-.+.++.|++|.++.+- .|++++++ +++.++++.....+ ++ +.+.
T Consensus 224 na~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D--~eL~~~~r~~~~~~eG~~tygg~~g 299 (460)
T PRK13237 224 NAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMND--EELFDEAKELVVVYEGMPSYGGMAG 299 (460)
T ss_pred ChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECC--HHHHHHHHHhccccCCCcCCCChhh
Confidence 22221110 00112466788999986541 48888887 88999888764322 11 2223
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC-------CCCChHHHHHHHHHh
Q 015890 269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDDFEVVRWLAHR 341 (398)
Q Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~ 341 (398)
-.+.+++-.|.+..+ ..+.+..-...++|.+.|.+.|. .+..|.+|.-++++..+ ..-....+..+|-.+
T Consensus 300 rd~~alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~~Gv-pv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~ 376 (460)
T PRK13237 300 RDMEAMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLAAGV-PIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIE 376 (460)
T ss_pred hHHHHHHhHHHhhch--HHHHHHHHHHHHHHHHHHHHCCC-ceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence 344455545543221 14444444556777788877665 55567777777775422 111355677777778
Q ss_pred cCeEEecCCCC--CC-----------CCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGAC--GC-----------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 342 ~gi~v~~g~~~--~~-----------~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
.||...--..+ +. -..+|+++.+ -|.++++...++|....++-
T Consensus 377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 89876432222 10 1579999888 58889999999998887663
No 335
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.3e-18 Score=143.91 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=213.1
Q ss_pred CCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 30 ~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
+++++|+.++ -.+..+|++.++-.+++++.....-+ -.-|.+..-+.+...+.++++ .++.++.+++-.|+..++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence 5688888765 35568999999999988764321110 112444455555555555444 466677777889999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~~~~ 184 (398)
.++..|.|.|+..+-.|.+..+..+.+. .+ .++|+-.++..+.+. -+.++|+.....+..|.+.|
T Consensus 145 eail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP-- 211 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP-- 211 (417)
T ss_pred HHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc--
Confidence 9999999999998888877776665543 11 134555566555421 11366776677888999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece----eccCCCccccc---cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~----~~~~~~~~~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++|.+++++||.++++||+| ++..|...... ..+.+++.++++|++| |...||..++ +.++.-+++
T Consensus 212 -l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp---~~li~llrq 285 (417)
T KOG1359|consen 212 -LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP---KPLISLLRQ 285 (417)
T ss_pred -HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC---hhHHHHHHh
Confidence 999999999999999999999 33344332221 2456788899999997 4445999999 778777765
Q ss_pred hhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890 258 VQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 258 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
-...+ +.+.++.....+.++++. .-.-.+.....+.+.+++++..+.-|+ .+.+.. .....+-+.. ..-+....
T Consensus 286 r~RpylFSnslppavV~~a~ka~dl-lm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~-hPI~pv~lGd-a~lA~~~a 361 (417)
T KOG1359|consen 286 RSRPYLFSNSLPPAVVGMAAKAYDL-LMVSSKEIQSRQANTQRFREFMEAAGF-TISGAS-HPICPVMLGD-ARLASKMA 361 (417)
T ss_pred cCCceeecCCCChhhhhhhHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCC-CCccceeccc-HHHHHHHH
Confidence 43322 222232222222333321 011133444556667778887776665 555432 2222222221 12345667
Q ss_pred HHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 336 RWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
++|| +.||+|...+++.- .-.||+.++. .+++|++++++++.++.+-+
T Consensus 362 d~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 362 DELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 7887 78999987776532 2368988888 89999999999998877653
No 336
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.83 E-value=1.8e-17 Score=165.05 Aligned_cols=339 Identities=13% Similarity=0.055 Sum_probs=215.8
Q ss_pred CeEEcCCcc--CCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHH
Q 015890 31 NAVSLAQGV--VYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI 105 (398)
Q Consensus 31 ~~~~l~~g~--~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~ 105 (398)
.++|+..+- ..++ .+|++.+|+.+++.+.. .+.......+....+++.|.+..+-+ .+.|+++++|++|++.+
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHH
Confidence 677877653 3333 38999999999987632 22111122345556777665532211 35799999999999999
Q ss_pred HHHhcc---------------------CCCEEEEeCCCCcChhhHHHhcCcE---------E------EEec-cCC----
Q 015890 106 VLTLCD---------------------AGDSVVMFAPYYFNSYMSFQMTGVT---------H------ILVG-PCS---- 144 (398)
Q Consensus 106 ~~~l~~---------------------~gd~Vl~~~p~~~~~~~~~~~~g~~---------~------~~~~-~~~---- 144 (398)
++...+ ...+|+....+|++....+-..+.. . ..+. |..
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 987631 1247999999998855433222210 0 0110 000
Q ss_pred -------CCC-----------CC-----CC------------hHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-C
Q 015890 145 -------SKT-----------LH-----PD------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-I 181 (398)
Q Consensus 145 -------~~~-----------~~-----~d------------~e~l~~~l~~------~~~~~~v~i~~p-~nptG~~-~ 181 (398)
..+ |. .+ .+.+++.|+. ...+++|+++.. ++..|++ +
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~ 603 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI 603 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence 000 00 00 2456666642 234788888863 6777886 5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK- 257 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~- 257 (398)
+++.++++.++|++||+++|.||++ |+..|........+....+-+++|.++ +| +++|.++++ +++.+.+..
T Consensus 604 ~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~Plaa~l~~---~~I~~~f~~~ 679 (817)
T PLN02974 604 DPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLVPLAATLAT---EEVFEAFRGP 679 (817)
T ss_pred CHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCCccEEEEEc---HHHHHhhccc
Confidence 7889999999999999999999999 777776544433333344557889997 78 599999999 788877742
Q ss_pred -----hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH----HHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890 258 -----VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR----EIIREALSPLGEGAVKGGEGAIYLWARLPE 326 (398)
Q Consensus 258 -----~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (398)
+....+++.++.+.+++.+.|+.. .+...+..+...+.. +.+.+.+.+++.+.-+... |.++.+.+.+
T Consensus 680 ~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~~iel~~ 758 (817)
T PLN02974 680 SKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVLALELDA 758 (817)
T ss_pred cccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEEEEEEec
Confidence 234568889999999999988752 222233333333333 3443445556654445555 6677777743
Q ss_pred CCC-------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 327 KHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 327 ~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
... -...++..++.++||++++. .+.||+.... .++++++++++.|.+.+
T Consensus 759 ~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 759 EGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 211 02345555543799999984 3678876555 78999999999998765
No 337
>PRK04311 selenocysteine synthase; Provisional
Probab=99.83 E-value=2.3e-17 Score=155.47 Aligned_cols=312 Identities=18% Similarity=0.115 Sum_probs=197.0
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 44 PPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
.++++++++.+.+.......|... .....+++.+++++ |. +..++++++++|+..++.++ .+||+|++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----Ga--e~a~vv~sgtaAl~l~l~~l-~~GdeVIv 170 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----GA--EDALVVNNNAAAVLLALNAL-AAGKEVIV 170 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHh-CCCCEEEE
Confidence 689999999988765432222211 11134455555544 54 35778888889999888664 78999999
Q ss_pred eCCCCcC------hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC--Cc--cCCCHHHHHH
Q 015890 119 FAPYYFN------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP--SG--TYIPERLLKR 188 (398)
Q Consensus 119 ~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np--tG--~~~~~~~l~~ 188 (398)
+...+.. +...++..|++++.+ +... ..+++++++++++++ ++|++.+++|+ +| ...+ +++
T Consensus 171 s~~e~~~~ggs~~i~~~~~~~G~~l~~v-~~~~---~t~~~dle~aI~~~T--klV~~vh~sN~~i~G~~~~~d---l~e 241 (464)
T PRK04311 171 SRGELVEIGGAFRIPDVMRQAGARLVEV-GTTN---RTHLRDYEQAINENT--ALLLKVHTSNYRIEGFTKEVS---LAE 241 (464)
T ss_pred cchhhhhcCcchhhHHHHHHCCcEEEEE-CCCC---CCCHHHHHHhcCccC--eEEEEEcCCCccccccCCcCC---HHH
Confidence 8865431 234567789999888 5432 237899999999876 99999999998 34 4567 999
Q ss_pred HHHHHHHcCCEEEEeece--ec----cC--CCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 189 ISDLCKAAGSWLVVDNTY--FM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~----~~--~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
|+++|++||+++++|..+ +. +. ..+. .....+.+++++|.+|.+| |...|+++++ +++++++...
T Consensus 242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~li~~l~~~ 316 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIARLKKH 316 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEc---HHHHHHHhhc
Confidence 999999999999999865 21 10 1111 1122456799999999986 3458999988 7888877632
Q ss_pred hccCCCCcchHHHHHHHHHhcC----Cc--------hHHHHHHHHHHHHHHHHHHHhccCCC----CccccC--------
Q 015890 259 QDNIPICASIISQHLALYSLQT----GP--------EWVTERVKDLVRNREIIREALSPLGE----GAVKGG-------- 314 (398)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~----~~--------~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~-------- 314 (398)
.-............+..++|.. .+ ..+....+.+.+++..+.+.|+.... ..+...
T Consensus 317 ~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs 396 (464)
T PRK04311 317 PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGS 396 (464)
T ss_pred hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCC
Confidence 2111222333444444444431 11 11233345666677888888876531 122211
Q ss_pred --Cc-cEEEEeeCCCCCCChHHHHHHHHHhcC--eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 315 --EG-AIYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 315 --~~-~~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.. -.-+.+.+.....+..++..+| ++.. |+.+- ..+.+.+-+....++|++.++++|.+++.
T Consensus 397 ~p~~~~~~~~v~~~~~~~~~~~l~~~l-r~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 397 LPVDRLPSAAVTLTPKDRSLEALAARL-RLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CcCCCCCeEEEEEeCCCCCHHHHHHHH-hcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 00 0122333333234567777765 4644 44442 57888888888788888888888887653
No 338
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.83 E-value=8.3e-18 Score=150.75 Aligned_cols=214 Identities=21% Similarity=0.213 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT 147 (398)
Q Consensus 72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~ 147 (398)
+.+..+...+....+ ....+++++|..|+..++..|+..|+.|++....|.+....+ ..+|++..++ ..+
T Consensus 77 Pt~~~le~~iaal~g--a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v-d~~--- 150 (409)
T KOG0053|consen 77 PTRDVLESGIAALEG--AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFV-DVD--- 150 (409)
T ss_pred CchHHHHHHHHHHhC--CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeee-chh---
Confidence 344555555554445 345888899989999999999999999999999998866544 4566777666 322
Q ss_pred CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~ 226 (398)
+++.+++.+++++ ++||+++|.||+..+.+ |++++++|+++|+++|||+++ -++-- .+...+.+|++.
T Consensus 151 ---~~~~~~~~i~~~t--~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~---~pL~lGADIV~h 219 (409)
T KOG0053|consen 151 ---DLKKILKAIKENT--KAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ---DPLPLGADIVVH 219 (409)
T ss_pred ---hHHHHHHhhccCc--eEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc---ChhhcCCCEEEE
Confidence 6778888888865 99999999999999999 999999999999999999998 33211 112233559999
Q ss_pred ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890 227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 305 (398)
Q Consensus 227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (398)
|.+|.+|- .-+=.|.++.+. +++..++........++.++.........++. +.-+.++..++.-.+.+.|+.
T Consensus 220 SaTKyi~Ghsdvi~G~iv~n~--~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt----l~lRi~~~~ena~~~A~~Le~ 293 (409)
T KOG0053|consen 220 SATKYIGGHSDVIGGSVVLNS--EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT----LHLRINKHSENALKIALLLEA 293 (409)
T ss_pred eeeeeecCCcceeeeEEecCc--HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch----hhhhHHHHHHHHHHHHHHhhh
Confidence 99999962 335567888764 88999988888777778887776665555543 344455556666666666665
Q ss_pred CCC
Q 015890 306 LGE 308 (398)
Q Consensus 306 ~~~ 308 (398)
.+.
T Consensus 294 ~~~ 296 (409)
T KOG0053|consen 294 HPK 296 (409)
T ss_pred CCc
Confidence 554
No 339
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.82 E-value=7.3e-18 Score=146.82 Aligned_cols=289 Identities=19% Similarity=0.238 Sum_probs=190.9
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 142 (398)
.+-...++++++..=. |+ --+.++|+.+|+..++..+.++||+|+....-|.+.. ..++.+|.++.++ +
T Consensus 61 NPT~~vlE~RiAaLEG---G~---aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv-d 133 (426)
T COG2873 61 NPTTDVLEERIAALEG---GV---AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV-D 133 (426)
T ss_pred CchHHHHHHHHHHhhc---ch---hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe-C
Confidence 3444566666666421 22 2356788889999999999999999999988887644 4568889999988 3
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
. .|+|.+++++++++ |+|+++...||-+.+.+ +++|+++|+++|+++|||..+ -+|--.+ ...+.
T Consensus 134 ~------~d~~~~~~aI~~nT--kavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~rP---~~hGA 199 (426)
T COG2873 134 P------DDPENFEAAIDENT--KAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCRP---IEHGA 199 (426)
T ss_pred C------CCHHHHHHHhCccc--ceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecch---hhcCC
Confidence 2 27899999999998 99999999999999999 999999999999999999988 4442222 22345
Q ss_pred EEEEcccccccCCCcceeEEEEccCCcHHHHH--HHH-----------------------------HhhccCCCCcchHH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLL-----------------------------KVQDNIPICASIIS 270 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~--~l~-----------------------------~~~~~~~~~~~~~~ 270 (398)
+|++.|++|++|-.|-.+|-+++..+.-++.+ ++. ........+.+++.
T Consensus 200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn 279 (426)
T COG2873 200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN 279 (426)
T ss_pred CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence 69999999999878888887665542111110 000 00011222334444
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-----------------CC-ccEEEEeeCCCCCCChH
Q 015890 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----------------GE-GAIYLWARLPEKHLDDF 332 (398)
Q Consensus 271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~ 332 (398)
.......++. +.-+.+++.+++..+.+.|+++|.+..+. +. .+-.+.+.+..+.....
T Consensus 280 Afl~lqGlET----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~ 355 (426)
T COG2873 280 AFLLLQGLET----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGK 355 (426)
T ss_pred HHHHHhchhh----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHH
Confidence 3333333332 45667778888889999998876532221 11 13355556654332233
Q ss_pred HHHHHHH---------HhcCeEEecCCCCC-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLA---------HRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 333 ~~~~~ll---------~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+++.|- +.+-+.+.|.+-.. .++.||+|++- |+++.++..|++++++
T Consensus 356 ~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 356 KFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDIDDIIADLEQALEA 425 (426)
T ss_pred HHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhc
Confidence 3433221 12235555654321 25799999996 7777788888887754
No 340
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.82 E-value=4.3e-17 Score=165.11 Aligned_cols=313 Identities=16% Similarity=0.118 Sum_probs=206.5
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhhhcCCCCCcEEEec-ChHHHHHHHHHHhc----cCCC----EEEEeCCCCcChhh
Q 015890 61 ISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIVLTLC----DAGD----SVVMFAPYYFNSYM 128 (398)
Q Consensus 61 ~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~-g~t~a~~~~~~~l~----~~gd----~Vl~~~p~~~~~~~ 128 (398)
.+.|.| .+|..++...+.+++.+.+|.+ ++.+.. |++++....+.++. ++|+ +|+++...|.....
T Consensus 528 ~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~ 605 (954)
T PRK05367 528 LHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA 605 (954)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH
Confidence 444544 2467788889999999999975 455555 55565544443333 4554 69999999988888
Q ss_pred HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206 (398)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~- 206 (398)
.++..|++++.+ +.+.+| .+|+++|+++++++ +.+.+|++++|++-.+...+ +++|+++|+++|+++++|.++
T Consensus 606 sa~~~G~~vv~v-~~d~~G-~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~ 680 (954)
T PRK05367 606 SAVMAGMKVVVV-ACDENG-NIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANM 680 (954)
T ss_pred HHHHCCCEEEEE-CCCCCC-CcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcCh
Confidence 899999999999 887654 78999999999863 44678888888876433467 999999999999999999999
Q ss_pred eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHhh-----c---cCCCCcchH----H
Q 015890 207 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKVQ-----D---NIPICASII----S 270 (398)
Q Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~~-----~---~~~~~~~~~----~ 270 (398)
....+.... ...+.+++..|.+|+|+ .+|..+|.+.++ +.+...+.... . ......+.. .
T Consensus 681 ~al~~l~~p-g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr---~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 681 NAQVGLARP-GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK---AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred hhccCCCCh-hhcCCCEEEecCcccCCCCcCCCCCceEEEeec---ccccccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence 343332221 12334588899999975 234557888877 33332221110 0 001111111 1
Q ss_pred HHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc--cEEEEeeC---CCC-CCChHHHHHHHHHhcC
Q 015890 271 QHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG--AIYLWARL---PEK-HLDDFEVVRWLAHRHG 343 (398)
Q Consensus 271 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~---~~~-~~~~~~~~~~ll~~~g 343 (398)
...+...+.. +.+.+++..+....+++++.+.|++...+.+..+.+ ..=+++++ ++. ..+..++.++|. ++|
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G 835 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYG 835 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCC
Confidence 1112223322 556677888878888999999887643223322211 11123333 221 235678889885 899
Q ss_pred eEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 344 VVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.....+ |..++.++|+++- .+.+|+++++++|.....++.+
T Consensus 836 ~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 836 FHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 9886633 4457889999888 7899999999999988877754
No 341
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.82 E-value=2.9e-17 Score=139.26 Aligned_cols=358 Identities=17% Similarity=0.187 Sum_probs=243.7
Q ss_pred ccCchHHHHHHHHHHcC--CCeEEcCCcc--CCCC---CcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 13 ETEMPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 13 ~~~~~~~~~~~~~~~~g--~~~~~l~~g~--~~~~---~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
...........+.+.+. ..-++|+.|. .+-+ +-|.|.++-.....+ .-.+.|-|..|.+.+++..++.+-..
T Consensus 11 ~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~ 90 (410)
T KOG1412|consen 11 VAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA 90 (410)
T ss_pred cCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence 33444555555555443 3467777775 1222 235555544443332 22678888999999999999886422
Q ss_pred cC--CCCCcE--EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-EEEEeccCCCCCCCCChHHHHH
Q 015890 85 NK--LYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-THILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 85 ~~--~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
.. +..+.+ +=+-|||.|+......+. -+...|.+..|+|.++...++..|. .+..++-.+.+.-.+|++.+..
T Consensus 91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Ls 170 (410)
T KOG1412|consen 91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLS 170 (410)
T ss_pred CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHH
Confidence 11 112221 223566688887766653 2345799999999999999999995 4444422344445679999999
Q ss_pred hhccCCCCeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-------cccCCcEEEEcc
Q 015890 158 TLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-------CVEGDHVVNLFS 227 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~-p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-------~~~~~~~i~~~s 227 (398)
.|+..+....+++.. .+||||.-.+.|++.+|++..++.+.+.+.|-+| |..++.... ...+...+++.|
T Consensus 171 dl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 171 DLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 998766334555553 4999999999999999999999999999999999 443332211 122445789999
Q ss_pred cccccCCCcceeEE--EEccCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCC---chH---HHHHHHHHHHH
Q 015890 228 FSKAYGMMGWRVGY--IAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG---PEW---VTERVKDLVRN 295 (398)
Q Consensus 228 ~sK~~~~~G~r~G~--i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~---~~~~~~~~~~~ 295 (398)
|+|.||+.+-|+|. ++.++ +..+.. +........++++.....++.+.|... ++| +..+..++.+.
T Consensus 251 FaKNfGlYneRvGnltvv~~n--~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~M 328 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNLTVVVNN--PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKM 328 (410)
T ss_pred hhhhcccccccccceEEEecC--hhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999996 34444 444443 333444456678888888999998862 233 34556677778
Q ss_pred HHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHH
Q 015890 296 REIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA 372 (398)
Q Consensus 296 ~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 372 (398)
|.+|++.|..++. +.-+..+.|+|.+-.+. ...++.|.++++|++.+.. ||+++..+...++.
T Consensus 329 R~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt------p~qV~~li~~h~vyLl~~G--------RInisGLN~~Nvey 394 (410)
T KOG1412|consen 329 RTALRDHLVALKTPGTWDHITQQIGMFSYTGLT------PAQVDHLIENHKVYLLSDG--------RINISGLNMKNVEY 394 (410)
T ss_pred HHHHHHHHHhcCCCCcHHHHHhhccceeecCCC------HHHHHHHHHhceEEEecCC--------cEeeeccccccHHH
Confidence 8888888876543 33344556888776654 3557778889999998754 88998888888999
Q ss_pred HHHHHHHHHHHHhc
Q 015890 373 AADRLRRGLEELVK 386 (398)
Q Consensus 373 ~~~~l~~~~~~~~~ 386 (398)
...+|.++++.+..
T Consensus 395 VAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 395 VAKAIDETVRAIKS 408 (410)
T ss_pred HHHHHHHHHHhhcc
Confidence 99999888887654
No 342
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=6.5e-17 Score=134.69 Aligned_cols=332 Identities=17% Similarity=0.150 Sum_probs=217.7
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--------CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--------DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
+++||++.=...-..+++.++|+.+.-+..+...|-. .+....+.+.+++|+ | -+.+-+|+|+.++
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl----g--~D~~R~t~GARe~ 88 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL----G--MDEVRVTAGAREA 88 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh----C--Cceeeecccchhh
Confidence 3566665322222368899999988755443333321 133455666677776 4 4678999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cC-CCCeEEEEeCCCCC
Q 015890 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TK-PTPKLVSVVNPGNP 176 (398)
Q Consensus 102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~-~~~~~v~i~~p~np 176 (398)
=++++.+++++||-|++...+|....-+++..|+++..++....-.+.+++|...+.++ +. ..+.+.+++++...
T Consensus 89 KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~ 168 (382)
T COG1103 89 KFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGE 168 (382)
T ss_pred HHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCC
Confidence 99999999999999999999999988899999999998832333346778887776665 32 33788889999888
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
-|.+.+ .+.++++|+++|+++++..+| .+.-. .+....+.+++++|-+|+++ +.-++|.+... .++.+.+
T Consensus 169 YGNl~D---akkva~ic~e~gvPlllN~AYt~Grmp--vs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~---eE~ae~V 239 (382)
T COG1103 169 YGNLAD---AKKVAKICREYGVPLLLNCAYTVGRMP--VSGKEIGADFIVGSGHKSMA-ASAPIGVLAMS---EEWAEIV 239 (382)
T ss_pred cCCchh---hHHHHHHHHHcCCceEeecceeecccc--ccccccCCCEEEecCccchh-ccCCeeEEeeh---hHHHHHH
Confidence 888877 899999999999999999999 44422 22222344599999999997 44579999988 5666654
Q ss_pred HHhh-c--------cCCCCcchHHHHHHHHHhcCCchHHHH---HHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEE
Q 015890 256 LKVQ-D--------NIPICASIISQHLALYSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLW 321 (398)
Q Consensus 256 ~~~~-~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~ 321 (398)
.+.. . ....+.-...+ ..++.+ -.+..+ +.+.--++.+.+.+.+++++++...+ |.....+.
T Consensus 240 ~r~Sg~~~~~KEvellGCT~rGapi---vTlmAS-fP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~ 315 (382)
T COG1103 240 LRRSGRAFPKKEVELLGCTVRGAPI---VTLMAS-FPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMK 315 (382)
T ss_pred HhhcccccccceeeeecccccCchH---HHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceee
Confidence 3221 1 01111111111 112222 222222 23334455677888888888655543 33222232
Q ss_pred eeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 322 ARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 322 ~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+..|... ....-+.+.| +++||.- ...+...++.+|+-..+.++++..++++++.+++.
T Consensus 316 Fetp~f~eIakk~~r~gyFlY~EL-K~RgI~G---I~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 316 FETPVFHEIAKKHKRKGYFLYEEL-KKRGIHG---IQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ecCchHHHHHHhCcCCceeeHHHH-HhcCccc---cccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 3332110 1223345555 5788743 22346789999977789999999999999887753
No 343
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.81 E-value=1.5e-17 Score=157.23 Aligned_cols=328 Identities=16% Similarity=0.119 Sum_probs=194.6
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|.+.+|+.+++.+.. .+.. . ...+-.+++.+....+. .+.+.+++++++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~~~-~--~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e 118 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NFTR-P--SAIELDAAESFLELIDG-ADMVKFCKNGSDATS 118 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CCCC-C--CHHHHHHHHHHHHhCCc-cceEEEecCHHHHHH
Confidence 4688999998764 3333 58999999999998743 2321 1 22333445555443321 357999999999999
Q ss_pred HHHHHhc-cCC-CEEEEe-CCCCcChhhHHH-----hcCcE--EE--EeccCCCCCCCCChHHHHHhhcc-CCCCeEEEE
Q 015890 104 NIVLTLC-DAG-DSVVMF-APYYFNSYMSFQ-----MTGVT--HI--LVGPCSSKTLHPDADWLEKTLET-KPTPKLVSV 170 (398)
Q Consensus 104 ~~~~~l~-~~g-d~Vl~~-~p~~~~~~~~~~-----~~g~~--~~--~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i 170 (398)
.+++... -.| .+|+.. ..+|+++..... ..|.. .. .. ... .-|++.+++.++. ...+++|++
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~~~~aavi~ 193 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV-TFR----YNDIASLEALFEDHPGRIACVIL 193 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc-ccC----CCCHHHHHHHHHhCCCCEEEEEE
Confidence 9999754 123 456655 344443211100 00110 00 00 111 1278999998863 223567777
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc-CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
+.. .|...+.+.+++|.++|++||+++|+||++ +.+.+ ..... .+....+.+++|.+| .|+.+|+++++
T Consensus 194 Epv---~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~--~g~~~~~gv~PDi~t~gK~lg-gG~p~~av~~~-- 265 (431)
T PRK06209 194 EPA---TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM--RGAQKLYGIVPDLSCFGKALG-NGFAVSALAGK-- 265 (431)
T ss_pred ccc---cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc--chhhHHhCCCcceeeehhhhc-CCcccEEEEEH--
Confidence 643 344778889999999999999999999999 43321 11110 111123457899998 77899999998
Q ss_pred cHHHHHH--HHHh------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 248 VEGFATQ--LLKV------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 248 ~~~~~~~--l~~~------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
+++.+. +... ....++++++...+++.+.|+.. ++..++..+.....++.+.+...+++........+.
T Consensus 266 -~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~ 344 (431)
T PRK06209 266 -REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGR 344 (431)
T ss_pred -HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecc
Confidence 677765 2111 12345566778888888887752 233444445555555555555455554322222222
Q ss_pred EEEEeeC--CCCCCCh----HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 318 IYLWARL--PEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 318 ~~~~~~~--~~~~~~~----~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
...+..+ ....... ..+..+++ ++||++.| ++++.. .+++++++++++|.+++.++.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~---------l~is~~-ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 345 PCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS---------LVVSYA-HGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred eEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc---------cccccc-CCHHHHHHHHHHHHHHHHHHH
Confidence 2222111 1111111 14456654 78997732 456644 589999999999999998874
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.81 E-value=3.7e-17 Score=156.36 Aligned_cols=308 Identities=10% Similarity=0.094 Sum_probs=201.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-------------CCcEEEecChHHHHHHHHHHhcc-------------
Q 015890 58 DPSISKYGADEGLPELRDALVKKLNQENKLY-------------KSSVMVTAGANQAFVNIVLTLCD------------- 111 (398)
Q Consensus 58 ~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-------------~~~v~~~~g~t~a~~~~~~~l~~------------- 111 (398)
+.....+..++...++++.+.+|+.+..+.. ...-++++|+|+|+..++.+..+
T Consensus 115 N~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~ 194 (522)
T TIGR03799 115 NQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVA 194 (522)
T ss_pred cCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccc
Confidence 3335667678888999999999998876321 12357899999999988876432
Q ss_pred -------------CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEe
Q 015890 112 -------------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVV 171 (398)
Q Consensus 112 -------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~ 171 (398)
++..|+++.-+|+++..+++..|+ +++.+ |++++ +.+|++.|++.++ .++.+-+|+.+
T Consensus 195 ~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~v-p~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvat 272 (522)
T TIGR03799 195 REGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAI-KTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGV 272 (522)
T ss_pred cccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEE-EeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 124688899999999999999998 78888 88765 4799999999986 34323334444
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccC
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
..++.||.+.| +++|+++|+++|+++++|.+| ... ... ...... ...+.++.|.||+++ ....+|.++.++
T Consensus 273 aGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~-~P~g~G~llvr~ 348 (522)
T TIGR03799 273 AGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLY-VPMGAGMVLFKD 348 (522)
T ss_pred ecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCC-cCcccEEEEEeC
Confidence 66789999999 999999999999999999999 221 110 000111 123467889999775 446689988875
Q ss_pred CcHHHHHHHHHhhc-------------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 247 EVEGFATQLLKVQD-------------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 247 ~~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
+...+.+..... ....+.+..+ ..+..+++. +...+++..++..++++++.+.|++.+.++++
T Consensus 349 --~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~ 425 (522)
T TIGR03799 349 --PALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELV 425 (522)
T ss_pred --HHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 455444432100 0111222222 234444443 44668899999999999999999988777777
Q ss_pred cCCccEEEEeeCCC-CCC--------------C------hHHHHHHHHHhcCeEEecCCC-----CCCC--CeEEEEecC
Q 015890 313 GGEGAIYLWARLPE-KHL--------------D------DFEVVRWLAHRHGVVVIPGGA-----CGCR--GHLRISFGG 364 (398)
Q Consensus 313 ~~~~~~~~~~~~~~-~~~--------------~------~~~~~~~ll~~~gi~v~~g~~-----~~~~--~~iRi~~~~ 364 (398)
.++.-+.+++++.. ... . ...+.+++. +.|........ +.+. -.+|++++.
T Consensus 426 ~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~n 504 (522)
T TIGR03799 426 TEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQPTVVFRVVLAN 504 (522)
T ss_pred cCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCCCcEEEEEEecC
Confidence 65545556666422 110 0 123444443 44554433221 2112 369999887
Q ss_pred --CCHHHHHHHHH
Q 015890 365 --LVEDDCKAAAD 375 (398)
Q Consensus 365 --~~~~~~~~~~~ 375 (398)
++.++++.+++
T Consensus 505 p~tt~~~i~~~l~ 517 (522)
T TIGR03799 505 PLTTHEILQDILD 517 (522)
T ss_pred CCCCHHHHHHHHH
Confidence 46666766554
No 345
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.80 E-value=1.3e-16 Score=157.93 Aligned_cols=310 Identities=13% Similarity=0.098 Sum_probs=204.0
Q ss_pred CCCCCC---CCCcHHHHHHHHHHHhhhcCCCCCcEEEec-ChHHHHHHHHHHhcc-------C-CCEEEEeCCCCcChhh
Q 015890 61 ISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIVLTLCD-------A-GDSVVMFAPYYFNSYM 128 (398)
Q Consensus 61 ~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~-g~t~a~~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~ 128 (398)
.+.|.| .+|..++...+.+++++.+|.+.- -+.+ +++.+..+.+.++.. + .++|+++...|+....
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa 606 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA 606 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence 467777 789999999999999999887554 3443 455666566666432 2 3678899988866666
Q ss_pred HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206 (398)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~- 206 (398)
.+...|++++.+ +.+++| .+|+++|+++++ .+++.++|.+++|++-++...+ +++|+++|+++|+++++|.++
T Consensus 607 sa~~~GieVv~V-p~D~~G-~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~---V~eI~~iah~~Galv~vDgA~~ 681 (954)
T PRK12566 607 SAQMAGMRVVIV-ECDPDG-NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG---IREICEVVHQHGGQVYMDGANL 681 (954)
T ss_pred HHHHCCCEEEEe-ccCCCC-CcCHHHHHHHhhccCCCEEEEEEEecCcCceecch---HHHHHHHHHHcCCEEEEEeeCh
Confidence 688899999999 887665 789999999997 3444578888888775544444 999999999999999999999
Q ss_pred eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHHhh----------ccCC--CC-cchH
Q 015890 207 FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLKVQ----------DNIP--IC-ASII 269 (398)
Q Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~~~----------~~~~--~~-~~~~ 269 (398)
....+.... ...+.+++.++++|+|+. +|..+|.+.+. +.+...+.... .... .+ .+..
T Consensus 682 ~a~~~l~~P-g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~---~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~ 757 (954)
T PRK12566 682 NAQVGLARP-ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR---AHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSAS 757 (954)
T ss_pred hhccCCCCh-hhcCCCEEEecCCcccCcCccCCCCccchhhhh---hhhhhhccCCCCcCCCCCCCCCCceeecccchHH
Confidence 444333221 223456889999999852 23445555555 33333332211 0000 11 1111
Q ss_pred HHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc---EEEEeeCC---C-CCCChHHHHHHHHHh
Q 015890 270 SQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA---IYLWARLP---E-KHLDDFEVVRWLAHR 341 (398)
Q Consensus 270 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~---~-~~~~~~~~~~~ll~~ 341 (398)
...++...+.. +.+ +.+.......+++++.+.|++...+.+ .+..+ .=+.+++. + ...+..++.++|+ +
T Consensus 758 ~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-d 834 (954)
T PRK12566 758 ILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLM-D 834 (954)
T ss_pred HHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHH-H
Confidence 12222333332 344 555555567788899988876333233 32212 22333433 1 1245678999987 8
Q ss_pred cCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 342 HGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+||.... ..|...+.+||+.+- .+.+|+++++++|.+..+++.
T Consensus 835 ~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 835 YGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred CCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9998755 344457899999888 889999999999998888864
No 346
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.80 E-value=2.1e-16 Score=148.59 Aligned_cols=310 Identities=15% Similarity=0.120 Sum_probs=186.9
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEE
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl 117 (398)
+.|+++++++.+.+.......|... .....+++.+++++ |.+ ..+++++++.|+..++.+ +.+||+|+
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~----gae--~alvv~sg~aAi~l~l~~-l~~GdeVI 164 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT----GAE--DALVVNNNAAAVLLALNT-LAKGKEVI 164 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHH-hCCcCEEE
Confidence 3589999999988765432223211 11244555555554 543 356677888999988855 57899999
Q ss_pred EeCCCCc---C---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC--c--cCCCHHHHH
Q 015890 118 MFAPYYF---N---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--G--TYIPERLLK 187 (398)
Q Consensus 118 ~~~p~~~---~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt--G--~~~~~~~l~ 187 (398)
++...|. + ....++..|++++.+ +... ..+++++++++++++ ++|++.+++|++ | ...| ++
T Consensus 165 vs~~e~v~~ggs~~i~~~~~~~G~~~~~v-~~~~---~~~l~dle~aI~~~T--~lv~~~h~sN~~~~G~~~~~d---l~ 235 (454)
T TIGR00474 165 VSRGELVEIGGSFRIPDVMEQSGAKLVEV-GTTN---RTHLKDYEDAITENT--ALLLKVHTSNYRIVGFTEEVS---IA 235 (454)
T ss_pred ECCChhhhhcchhhHHHHHHHcCCEEEEe-CCCC---CCCHHHHHHhcCcCC--EEEEEEccCcccccCCCCCCC---HH
Confidence 9987642 2 234567789999888 5432 247899999998876 999999999985 5 4677 99
Q ss_pred HHHHHHHHcCCEEEEeece--ec----cC--CCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 188 RISDLCKAAGSWLVVDNTY--FM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~----~~--~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+|+++|+++|+++++|.+. +. +. ..+. .....+.+++++|.+|++| |...|+++++ +++++.+..
T Consensus 236 ~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~~i~~l~~ 310 (454)
T TIGR00474 236 ELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIERLKK 310 (454)
T ss_pred HHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEEC---HHHHHhhhh
Confidence 9999999999999999764 21 10 1111 1222345689999999996 3357999988 677766543
Q ss_pred hhccCCCCcchHHHHHHHHHhcC----Cc--------hHHHHHHHHHHHHHHHHHHHhccC--CC--CccccCC----cc
Q 015890 258 VQDNIPICASIISQHLALYSLQT----GP--------EWVTERVKDLVRNREIIREALSPL--GE--GAVKGGE----GA 317 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~----~~--------~~~~~~~~~~~~~~~~l~~~l~~~--~~--~~~~~~~----~~ 317 (398)
..-...........+++.+.+.. .+ ..+....+.+++++..+.+.|++. +. ..+.... +|
T Consensus 311 ~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg 390 (454)
T TIGR00474 311 NPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGG 390 (454)
T ss_pred chhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCC
Confidence 22111112222233333333321 11 112223445666677777777653 21 1222111 00
Q ss_pred -------EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 318 -------IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 318 -------~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
.-+.+.+.....+..++..+| ++....|..- -.++.+.+-+....++|++.++++|
T Consensus 391 ~~p~~~l~~~~v~~~~~~~~~~~l~~~l-r~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 391 SLPDERLPSYAVTLTPDGLSAEKLEARL-RELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CCcCCCCCeEEEEEecCCCCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 112233322234567777765 5666333221 2477888888887778887777665
No 347
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.80 E-value=5.5e-19 Score=153.21 Aligned_cols=282 Identities=21% Similarity=0.246 Sum_probs=178.2
Q ss_pred cHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhccC----C--CEEEEeCCCCcChhhHHHhcCcEEEEec
Q 015890 70 LPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDA----G--DSVVMFAPYYFNSYMSFQMTGVTHILVG 141 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~----g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 141 (398)
.++|.+.|.+.-....++ +...|++++|+|+.+++++.+|... + -+|+...|.|+.|......+.-....+
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w- 123 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW- 123 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE-
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc-
Confidence 366666666654444343 4567999999999999999998532 1 379999999988887654443222222
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCccccccC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCCVEG 219 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~~~~ 219 (398)
.-|...+. + +..+.+-.=++++||||.|.+ .+.++ +..+..+|.|-+| .+ |...... .
T Consensus 124 ~Gda~~~~-~--------~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI~~~---a 183 (363)
T PF04864_consen 124 AGDASNFK-N--------SDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPITAP---A 183 (363)
T ss_dssp EEECCCGT-T---------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS---S----B
T ss_pred cccHHhhc-c--------CCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccccCCC---C
Confidence 12222221 0 011112344788999999986 33333 4567788999999 33 2333332 3
Q ss_pred CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC----Cc------hHHHHHH
Q 015890 220 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT----GP------EWVTERV 289 (398)
Q Consensus 220 ~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~------~~~~~~~ 289 (398)
+.++.++|+||.-|-+|-|+||.++.+ +++.+++..+....+.+++.-.|.-+.+.|.. .. +.+.--.
T Consensus 184 D~DiMLFT~SK~TGHAGSR~GWAlVKD--~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~ 261 (363)
T PF04864_consen 184 DHDIMLFTLSKLTGHAGSRFGWALVKD--EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGY 261 (363)
T ss_dssp --SEEEEEHHHHCS-GGG-EEEEEES---HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred CCceEEEEEecccCccccccceeeecC--HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHH
Confidence 456999999999999999999999998 88999998888888889999899888887764 11 2444456
Q ss_pred HHHHHHHHHHHHHhccCCCC--------------ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-C
Q 015890 290 KDLVRNREIIREALSPLGEG--------------AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-C 354 (398)
Q Consensus 290 ~~~~~~~~~l~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~ 354 (398)
+.++++..+|++.+.+-.-+ ++..| ...|.|++..... .+-|..++++.||..+.|..|+ .
T Consensus 262 ~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~ee---d~DC~~~l~~~~I~tr~G~~fga~ 337 (363)
T PF04864_consen 262 STMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCEREE---DEDCYAVLREAKIITRSGVLFGAD 337 (363)
T ss_dssp HHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSCG---GSSHHHHHHCTTEEEEEGGGGTS-
T ss_pred HHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCcc---cccHHHHHHhCCcccCCCCccCCC
Confidence 67788888999988754321 12222 3678999997532 2335556679999999999997 4
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 355 RGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 355 ~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
+.++|+|+-. ++++++.++++|.+
T Consensus 338 ~ryVRlSml~-~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 338 SRYVRLSMLK-RDDDFDQLLERLSK 361 (363)
T ss_dssp TTEEEEESSS--HHHHHHHHHHHHC
T ss_pred CCeEEEeccC-CHHHHHHHHHHHHh
Confidence 6899999996 89999999999875
No 348
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=6.4e-16 Score=151.85 Aligned_cols=163 Identities=17% Similarity=0.105 Sum_probs=122.7
Q ss_pred HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCC--CCCC-
Q 015890 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--LHPD- 151 (398)
Q Consensus 76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~~~d- 151 (398)
...+..++.+|. ..-.++++|+|.+|.+++.+++++||+|+++..||-+....+...|+.++++.|.- +.| ..++
T Consensus 209 eAq~~aA~~fgA-~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~ 287 (755)
T PRK15029 209 ESEKYAARVFGA-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYP 287 (755)
T ss_pred HHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCc
Confidence 333334444465 35688899999999999999999999999999999999999999999999984432 222 1234
Q ss_pred ----hHHHHHhhccCCCCe--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-cc-
Q 015890 152 ----ADWLEKTLETKPTPK--------LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-KH- 214 (398)
Q Consensus 152 ----~e~l~~~l~~~~~~~--------~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~~- 214 (398)
++.++++++..+..+ ++++++|++ -|++++ +++|+++|+++|++|++|||| +.|... +.
T Consensus 288 ~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~ 363 (755)
T PRK15029 288 QEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH 363 (755)
T ss_pred cccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCcccccc
Confidence 889999997544344 899999876 799999 999999999999999999999 555432 21
Q ss_pred ccc-----c-CCc-EEEEcccccccCCCcceeEE-EEcc
Q 015890 215 CCV-----E-GDH-VVNLFSFSKAYGMMGWRVGY-IAYP 245 (398)
Q Consensus 215 ~~~-----~-~~~-~i~~~s~sK~~~~~G~r~G~-i~~~ 245 (398)
.+. . .+. ++++.|.||.+ |++.-|. +-.+
T Consensus 364 sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~ 400 (755)
T PRK15029 364 YAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVR 400 (755)
T ss_pred ccccccccccCCCceEEEEchhhcc--cchhhhhhheeC
Confidence 222 1 233 48899999998 4666554 4443
No 349
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.80 E-value=5.5e-18 Score=155.29 Aligned_cols=232 Identities=14% Similarity=0.170 Sum_probs=146.3
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CC-
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KT- 147 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~- 147 (398)
..+.++.+++.+ |. .+-.++++|+|.++.+++.+++++||+||++..+|.+....+...|+.++++.|.+. .|
T Consensus 68 I~eAe~~aA~~f----GA-d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 68 IKEAEELAARAF----GA-DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp HHHHHHHHHHHH----TE-SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred HHHHHHHHHHhc----CC-CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence 344455555544 54 345888999999999999999999999999999999999999999999999855422 12
Q ss_pred -CCCCh-----HHHHHhhccCCCCeE---EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccc
Q 015890 148 -LHPDA-----DWLEKTLETKPTPKL---VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHC 215 (398)
Q Consensus 148 -~~~d~-----e~l~~~l~~~~~~~~---v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~ 215 (398)
..+++ +.++++++..+..++ |+|++|+. -|++++ +++|+++|+++|++|++|||| +.|...+..
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 23456 999999986555555 99999876 799999 999999999999999999999 555533333
Q ss_pred cccCC-------cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcCC-chHH
Q 015890 216 CVEGD-------HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQTG-PEWV 285 (398)
Q Consensus 216 ~~~~~-------~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~~~ 285 (398)
....+ .++++.|.||.++ ++.- +++-.+++-.--.++++...... +.+++.+.++.+..+.... ....
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G 296 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEG 296 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH
T ss_pred hhhccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh
Confidence 32222 3488999999984 6544 45555542101133443333222 3444444444444443322 2233
Q ss_pred HHHHHHHHHHHHHHHHHh---ccCCCCccc
Q 015890 286 TERVKDLVRNREIIREAL---SPLGEGAVK 312 (398)
Q Consensus 286 ~~~~~~~~~~~~~l~~~l---~~~~~~~~~ 312 (398)
++..+...++...+++.+ .+..++++.
T Consensus 297 ~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~ 326 (417)
T PF01276_consen 297 RELLEEAIELAEEFRKKINRLNDIWGFKVL 326 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence 445555555555565555 555444443
No 350
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.80 E-value=8.1e-17 Score=147.81 Aligned_cols=313 Identities=14% Similarity=0.075 Sum_probs=212.2
Q ss_pred CCCCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhc-cCCCEE
Q 015890 41 YWQPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLC-DAGDSV 116 (398)
Q Consensus 41 ~~~~~~~-v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~-~~gd~V 116 (398)
|....|. ..+++.+.+.. ..+.++.+.++.+.+.+.+++.++.+.+ -++++.|+|.++++++.+++ ++|++|
T Consensus 11 p~~~~~~~~~~~~~~~~~~----~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~v 86 (374)
T TIGR01365 11 PCAKRPGWSIEELKNAPLG----RSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDV 86 (374)
T ss_pred ccCCCchhhHHHHhhhhcc----cCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeE
Confidence 4444555 66666654433 2235666677888888888888886433 47779999999999999999 588899
Q ss_pred EEeCCCCcC--hh-hHHHhcCc-EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 117 VMFAPYYFN--SY-MSFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 117 l~~~p~~~~--~~-~~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
++.. +++ +. +.++.+|+ ++..+ .. +.|..+++++++. . +.|++++..+.||+..| +++++..
T Consensus 87 Lv~g--~FG~r~~~eia~~~g~~~v~~l-~~-~~g~~~~~~~ve~----~---~~v~~vhnETSTGv~np---v~~i~~~ 152 (374)
T TIGR01365 87 LAWE--SFGKGWVTDVTKQLKLPDVRVL-EA-EYGKLPDLKKVDF----K---NDVVFTWNGTTSGVRVP---NGDFIPA 152 (374)
T ss_pred EEEC--HHHHHHHHHHHHhcCCCCcEEE-cC-CCCCCCCHHHcCC----C---CCEEEecCCCchheecc---ccccccc
Confidence 9864 444 34 77888999 46766 43 3555678888873 1 23678888899999999 5555532
Q ss_pred HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-------------
Q 015890 193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV------------- 258 (398)
Q Consensus 193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~------------- 258 (398)
+ ++.++|+|.+. ++-...... +.++++.|..|.+++|+ .+++++.+ ++.+++....
T Consensus 153 ~--~~~lliVDavSs~g~~~l~~d----~iDv~~tgsQK~L~~pp-Gls~v~vs---~~Al~~~~~~~~y~~~~~~~~~~ 222 (374)
T TIGR01365 153 D--REGLTICDATSAAFAQDLDYH----KLDVVTFSWQKVLGGEG-AHGMLILS---PRAVARLESYTPAWPLPKIFRLT 222 (374)
T ss_pred c--CCCcEEEEccchhcCCCCChh----HCcEEEEechhccCCCC-ceEEEEEC---HHHHHHHhhcCCCCCChhhhccc
Confidence 2 48999999888 554332222 25588889999998643 35778878 5555443310
Q ss_pred ----------hccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccEEEEe
Q 015890 259 ----------QDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWA 322 (398)
Q Consensus 259 ----------~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~ 322 (398)
...++++++.....++..+++.. + ..++.+.++++++++.+++.++++|+...... .......+
T Consensus 223 ~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v 302 (374)
T TIGR01365 223 KGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCL 302 (374)
T ss_pred cccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEE
Confidence 12345566666777766666531 1 24889999999999999999999984344431 11223444
Q ss_pred eCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 323 ~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.++.... + ..++...+ +++||.+.+|..-..+..+||+... .+.+|++.+++.|.=+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 303 KVVDPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred EeCCccccccccchhhHHHHHHHHHH-HHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 5543311 2 45666655 5789999988765456889998666 899999999998875543
No 351
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=1.1e-16 Score=150.26 Aligned_cols=297 Identities=16% Similarity=0.142 Sum_probs=208.4
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccC--------C
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDA--------G 113 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~--------g 113 (398)
.+++...+.+...+..+ .......++..++.+.+..++.+.++.+ .-.-.+|+|+|+++...+.+.... +
T Consensus 73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 35677777777776653 3333345577899999999999999874 446889999999999888875421 1
Q ss_pred C------EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 114 D------SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 114 d------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
. +|+++...|+++.++++.+|++...+ +++.....+|++++++++++.+...+|+.+.++.++|.+-| ++
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v-~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~ 227 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRV-PTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IE 227 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeE-EeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HH
Confidence 1 69999999999999999999988888 77665678999999999998772223777778999999988 99
Q ss_pred HHHHHHHHcCCEEEEeece----eccCCCccc-ccc-CCcEEEEcccccccCCCcceeEEEEccCCcH-HHHHHHHHhhc
Q 015890 188 RISDLCKAAGSWLVVDNTY----FMYDGRKHC-CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLLKVQD 260 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~----~~~~~~~~~-~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~-~~~~~l~~~~~ 260 (398)
+|+++|++++++++||.++ +.|...... ... ...+-+..++||.+ ...+.+||++.++ + .+.+.+.....
T Consensus 228 ~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g-~aP~~~G~il~rd--~e~l~~~~~~~~~ 304 (460)
T COG0076 228 ELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYG-LAPIGCGVVLFRD--EEALRRILIFADY 304 (460)
T ss_pred HHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccccc-CCCCCceEEEEEC--HHHhhhhhhcccc
Confidence 9999999999999999999 333222222 122 22334567999987 4667899999997 5 34443321111
Q ss_pred cCC----------CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC
Q 015890 261 NIP----------ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 329 (398)
Q Consensus 261 ~~~----------~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (398)
..+ ++.+.....+..+.+.. +.+.+.+..++..++++++.+.+++.+...+..++..+.+.+++++...
T Consensus 305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~ 384 (460)
T COG0076 305 YLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDED 384 (460)
T ss_pred cCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCccc
Confidence 111 11223233333444443 5677899999999999999999999986577665558888888854221
Q ss_pred ChHHHHHHHHHhcCeEEec
Q 015890 330 DDFEVVRWLAHRHGVVVIP 348 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~ 348 (398)
...+..+++ ++.|..+..
T Consensus 385 ~~~~~~~~~-~~~gw~v~~ 402 (460)
T COG0076 385 TLADLSERL-DRRGWQVPA 402 (460)
T ss_pred chhchHHHH-HhcCceeec
Confidence 133344444 356666643
No 352
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.79 E-value=1.8e-17 Score=142.53 Aligned_cols=350 Identities=17% Similarity=0.181 Sum_probs=240.1
Q ss_pred chHHHHHHHHHHcC--CCeEEcCCcc--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-C-
Q 015890 16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-K- 86 (398)
Q Consensus 16 ~~~~~~~~~~~~~g--~~~~~l~~g~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~- 86 (398)
...+--+..++... ..-+||++|. .+.+ +-|.|.+|-.+.+.....-.|-|-.|.+++.+..++++-... .
T Consensus 36 pDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ 115 (427)
T KOG1411|consen 36 PDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPV 115 (427)
T ss_pred CCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchh
Confidence 33344455555544 4467777775 2222 458888887776664445689999999999999998863211 1
Q ss_pred CCCCcEEEe--cChHHHHHHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 87 LYKSSVMVT--AGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 87 ~~~~~v~~~--~g~t~a~~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
+..+.|+.+ -++|.|+......+ .-++..|.+|.|+|.++...++..|+.+..++.-+.....+|.+.+-+.+...
T Consensus 116 ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~ 195 (427)
T KOG1411|consen 116 IKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA 195 (427)
T ss_pred hhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC
Confidence 123344443 45557776555544 34678999999999999999999999877663444555567888877777755
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-------ccccCCcEEEEccccccc
Q 015890 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-------CCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 163 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-------~~~~~~~~i~~~s~sK~~ 232 (398)
+.-..|++. ..+||||+-.+.|++++|.++.++.+.+-+.|.+| |..+.... ....+.+++++.|++|.+
T Consensus 196 p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM 275 (427)
T KOG1411|consen 196 PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM 275 (427)
T ss_pred CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc
Confidence 533445554 45999999999999999999999999999999999 44332211 122356788899999999
Q ss_pred CCCcceeEEE--EccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC---chHH---HHHHHHHHHHHHHHH
Q 015890 233 GMMGWRVGYI--AYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG---PEWV---TERVKDLVRNREIIR 300 (398)
Q Consensus 233 ~~~G~r~G~i--~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~---~~~~~~~~~~~~~l~ 300 (398)
|+-|-|+|.+ ++.+ .+...++ ..+......++|.....++...|.+. .+|. .-+..++...+..+.
T Consensus 276 GLYgERvGa~svvc~~--ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~ 353 (427)
T KOG1411|consen 276 GLYGERVGALSVVCKD--ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLF 353 (427)
T ss_pred chhhhccceeEEEecC--HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHh
Confidence 9999999974 5554 4444443 33444555667777777777777652 2343 445666777788888
Q ss_pred HHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 301 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 301 ~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
+.|++.+. +..+..+-|+|.+-.+. .+.+++|.+++.|+...- -|||++..+...+..+.++|
T Consensus 354 d~L~~~gs~~~W~hI~~QIGMF~fTgl~------peQv~~l~ke~~iYmT~d--------GRiS~aG~ss~nV~yLa~ai 419 (427)
T KOG1411|consen 354 DALEKEGSPGNWSHITKQIGMFCFTGLN------PEQVDWLTKEYHIYLTKD--------GRISMAGLSSSNVPYLADAI 419 (427)
T ss_pred HHhhcCCCCccHHHHHHhhheeeecCCC------HHHHHHHHhhheeeeccC--------ceEeeccccccCCcccchhh
Confidence 88887654 22344555788776664 367788888999998642 28998886667777777766
Q ss_pred HHHH
Q 015890 378 RRGL 381 (398)
Q Consensus 378 ~~~~ 381 (398)
.++-
T Consensus 420 h~vt 423 (427)
T KOG1411|consen 420 HAVT 423 (427)
T ss_pred HhHh
Confidence 6543
No 353
>PLN02452 phosphoserine transaminase
Probab=99.79 E-value=1.2e-16 Score=146.74 Aligned_cols=323 Identities=13% Similarity=0.123 Sum_probs=219.1
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFV 103 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~ 103 (398)
.++|+-| |...|++|++++.+.+.+.. +-..+.++.+.++.+.+.+.++++++++. +-+++..|+|.+++
T Consensus 8 ~~~f~pG--P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSAG--PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeCC--CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 4566555 77789999999988764311 11112355556777777788888888743 34677799999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
++..+++.+|+++++...++++ +.+.++.+|...+.. ..... ...++++++ +..+.++.|.+++..+.||+
T Consensus 86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~v~~~hnETstGv 160 (365)
T PLN02452 86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIA-SGKDEKYTKIPSVSEW----ELTPDAKFVHICANETIHGV 160 (365)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEE-ecCCCCCCCCCChHHc----CCCCCCcEEEECCCCCCCcE
Confidence 9999999999999998888866 556778888633332 11111 123565554 32334689999988899999
Q ss_pred C-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 180 Y-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 180 ~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
. .+ ++++. ++++|+|.++ ++.... .....+ ++..|.+|.+|++| +|.++++ +++++++..
T Consensus 161 ~~~~---~~~i~------~~~lvVDa~Ss~g~~pi--dv~~~~--v~~~saqK~lGP~G--l~~v~vr---~~~l~~~~~ 222 (365)
T PLN02452 161 EFKD---YPDVG------NVPLVADMSSNFLSKPV--DVSKYG--VIYAGAQKNVGPSG--VTIVIIR---KDLIGNARP 222 (365)
T ss_pred ecCc---ccccC------CCeEEEECCccccCccc--CHHHcC--EEEEecccccCCCC--eEEEEEc---HHHHhhccc
Confidence 5 55 54443 3899999988 654332 222233 34469999999888 5888888 666655422
Q ss_pred h------------hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCC-cc-ccC--CccEE
Q 015890 258 V------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AV-KGG--EGAIY 319 (398)
Q Consensus 258 ~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~~-~~~--~~~~~ 319 (398)
. .....+|+|.....++..+|+...+ .++.+.++.+++++.+++.|++..++ .. ..+ .....
T Consensus 223 ~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~ 302 (365)
T PLN02452 223 ITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMN 302 (365)
T ss_pred CCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeE
Confidence 1 1123357888888888888886322 47888899999999999999886432 11 111 22345
Q ss_pred EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+.+.++.. ....++.+.+ +++|+...+|... -+.+|+|+-. .+.++++.+++.++++.++
T Consensus 303 vsF~~~~~-~~~~~f~~~~-~~~g~~~~~G~r~--~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 303 VPFTLGGS-ELEAEFVKEA-AKAGMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEEcCCc-hhHHHHHHHH-HHCCCcccCCccc--cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 66666543 2455666655 7999999998743 2349999666 8889888888888877654
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.79 E-value=5.7e-16 Score=154.42 Aligned_cols=313 Identities=16% Similarity=0.088 Sum_probs=206.4
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc--------CCCEEEEeCCCCcChhhH
Q 015890 61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--------AGDSVVMFAPYYFNSYMS 129 (398)
Q Consensus 61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~ 129 (398)
.+.|.|. +|..++...+..|+.+.+|.+. .-+..++++.+....+.+... ..++|+++...|......
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas 594 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS 594 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH
Confidence 4555543 5678899999999999999874 233345555555544444432 235789999999888888
Q ss_pred HHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e
Q 015890 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F 207 (398)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~ 207 (398)
++..|++++.+ +.+++| .+|+++|++++++ +..+++|++++|+| +|.+.+. +++|+++|+++|.++++|.++ .
T Consensus 595 a~~~G~~Vv~V-~~d~~G-~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~--I~eI~~iah~~G~~v~VDgAq~~ 669 (939)
T TIGR00461 595 AAMAGMQVVPV-NCDQDG-NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT--IQHACDIVHSFGGQVYLDGANMN 669 (939)
T ss_pred HHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc--HHHHHHHHHHcCCEEEEEecChh
Confidence 99999999999 887554 7899999999984 23368999999999 7877432 999999999999999999999 4
Q ss_pred ccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHH--h-------------hccCC-CCcc
Q 015890 208 MYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLK--V-------------QDNIP-ICAS 267 (398)
Q Consensus 208 ~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~--~-------------~~~~~-~~~~ 267 (398)
...+... ....+.+++++|.+|.|+ .+|..+|.+.++ +++...+.. . ..... ...+
T Consensus 670 al~~l~~-Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr---~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~ 745 (939)
T TIGR00461 670 AQVGLTS-PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGS 745 (939)
T ss_pred hCCCCCC-ccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh---hhchhhcCCCcccccccCCCCccccccccccccCc
Confidence 3333221 122345688999999775 355668999888 343332210 0 00001 1112
Q ss_pred hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE---EEEeeCCC----CCCChHHHHHHHH
Q 015890 268 IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI---YLWARLPE----KHLDDFEVVRWLA 339 (398)
Q Consensus 268 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~ll 339 (398)
......+...+.. +.+.+++..+....+++++.+.|++... ..+....+. =+.++++. ...+..++.++|+
T Consensus 746 a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~-~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~ 824 (939)
T TIGR00461 746 ASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYP-ILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ 824 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCc-ccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence 2222333333332 5677888888888899999999987332 223222122 24556652 1246788999987
Q ss_pred HhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 340 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
++|+.... ..|...+.+=|.++- .+.+|+|++++++.+..+++.+
T Consensus 825 -d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 825 -DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred -hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 88998644 333334454444444 5889999999999887776654
No 355
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.8e-17 Score=141.68 Aligned_cols=331 Identities=14% Similarity=0.150 Sum_probs=222.6
Q ss_pred HHcCCCeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 26 VRGAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
...|+.++||-.+-... -.+|-+++++.++..+-.+.+- .....+.-.+++++..+++ -+.|+..+.+.+|.
T Consensus 55 D~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssr---afYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~ 129 (427)
T KOG1402|consen 55 DPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSR---AFYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAV 129 (427)
T ss_pred CCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhH---HHhhhhHHHHHHHHHHhcC--cceeeecccchhHH
Confidence 34688899998654222 3689999999998875211111 1112333344444444445 35577777778999
Q ss_pred HHHHHHhcc--------C-C-CEEEEeCCCCcChhh----------HHHhcCcE----EEEeccCCCCCCCCChHHHHHh
Q 015890 103 VNIVLTLCD--------A-G-DSVVMFAPYYFNSYM----------SFQMTGVT----HILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 103 ~~~~~~l~~--------~-g-d~Vl~~~p~~~~~~~----------~~~~~g~~----~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
+.++....+ | . ..|+....+|++-.. ..+.+|.- +..+ +.+ |+++|+..
T Consensus 130 Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v----~Y~---d~eale~~ 202 (427)
T KOG1402|consen 130 ETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKV----PYG---DAEALEVA 202 (427)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceee----ccC---CHHHHHHH
Confidence 999887651 2 2 245556666655332 22333310 1111 112 79999999
Q ss_pred hccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcE-EEEcccccccCC
Q 015890 159 LETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHV-VNLFSFSKAYGM 234 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~-i~~~s~sK~~~~ 234 (398)
++... .+++++...+...|++ .|+..+.+..++|.+||+++|.||++ ++..|...... ++++ ..+--+.|+++
T Consensus 203 l~~~~-vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d-~env~PDivilgKalS- 279 (427)
T KOG1402|consen 203 LKSPN-VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACD-YENVRPDIVILGKALS- 279 (427)
T ss_pred hcCCC-eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEee-hhhcCCCeEEEecccc-
Confidence 99744 7888888889999996 56668999999999999999999999 77777543332 1111 11224569997
Q ss_pred Cc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-----
Q 015890 235 MG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE----- 308 (398)
Q Consensus 235 ~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----- 308 (398)
+| ++++.++++ +++.-.+.......+++.|+.+.+++.++|+... -++..++....-+.+++.|.+++.
T Consensus 280 GG~~Pvsavl~~---~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~~lG~~l~~~L~~l~~~~p~~ 354 (427)
T KOG1402|consen 280 GGVYPVSAVLAD---DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRDQLNKLQKKFPHV 354 (427)
T ss_pred CCeeeeEEEEec---HHHHhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 45 588888888 6888778887788899999999999999998522 245555566666666666665543
Q ss_pred CccccCCccEEEEeeCC---CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
++..... |++..+.+. ....++.+++..+ +++|+...|-. .+-||++..- ++++|+++.++++.+++.
T Consensus 355 v~~VRGr-Gl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 355 VKEVRGR-GLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred hheeecc-ceEEEEEeccccccchhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 2444556 666666664 2224566777755 68999887753 5689999777 899999999999998764
No 356
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=1.2e-17 Score=138.26 Aligned_cols=164 Identities=23% Similarity=0.253 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh-hHHHhcCcEEEEeccCCCCCC-
Q 015890 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTL- 148 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~- 148 (398)
.++++.+++++ +.+.+++++++|+|+++..++.++.+++++|+++.++|++.. ..++..|+++..+ +.+..+.
T Consensus 3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~ 77 (170)
T cd01494 3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPV-PVDDAGYG 77 (170)
T ss_pred HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEe-ccCCCCcc
Confidence 46677777766 355788999999999999999999988999999999999988 8889999999988 6655432
Q ss_pred CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
..+.+.+++..... .++++++++++|++|...+ +++|.++|+++|+++|+|++| +............+.++++.
T Consensus 78 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~ 153 (170)
T cd01494 78 GLDVAILEELKAKP-NVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred chhhhhhhhccccC-ceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence 22323554444332 3699999999999999998 688999999999999999999 22222111122234568889
Q ss_pred ccccccCCCcceeEEEEcc
Q 015890 227 SFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~ 245 (398)
|++|.++. .++|+++++
T Consensus 154 s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 154 SLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EcccccCC--CceEEEEeC
Confidence 99999973 678998764
No 357
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.78 E-value=1.1e-18 Score=154.77 Aligned_cols=246 Identities=19% Similarity=0.212 Sum_probs=164.8
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~ 123 (398)
++|++++++.+....+ . .|+.++...++++.+++.+ | .+..++++++|.++.+++++++++++.|++..++|
T Consensus 7 ~~~~m~~a~~~a~~gd-~-~Yg~D~~~~~l~~~i~~l~----g--~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD-D-AYGEDPTTARLEERIAELF----G--KEAALFVPSGTMANQLALRAHLRPGESVICADTAH 78 (290)
T ss_dssp S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEH
T ss_pred CCHHHHHHHHccccCC-c-ccCCChhHHHHHHHHHHHc----C--CCEEEEeCCCChHHHHHHHHHHhcCCceeccccce
Confidence 6899999996654433 2 5888877788888888877 4 45667999999999999999999999999999988
Q ss_pred cC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCC-CccCCCHHHHHHHHHHHHH
Q 015890 124 FN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP-SGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 124 ~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~np-tG~~~~~~~l~~i~~l~~~ 195 (398)
.. ........|.+++.+ +.++. ..+++++|++.++. .+.+++|+|++++|. .|.+++.+++++|.++|++
T Consensus 79 i~~~E~ga~~~~~G~~~~~l-~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~ 156 (290)
T PF01212_consen 79 IHFDETGAIEELSGAKLIPL-PSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE 156 (290)
T ss_dssp HHHSSTTHHHHHTTCEEEEE-BECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH
T ss_pred eeeeccchhhHhcCcEEEEC-CCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh
Confidence 42 223336689999988 65542 47899999999984 234799999999886 3889999999999999999
Q ss_pred cCCEEEEeeceec----cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc--hH
Q 015890 196 AGSWLVVDNTYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS--II 269 (398)
Q Consensus 196 ~~~~livDe~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~--~~ 269 (398)
+|+.++.|.+.+. ..+.........-+.+..|++|.+++++ .+.++++ +++++.-...+......+. .+
T Consensus 157 ~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~--Gavl~~~---~~~i~~~~~~~k~~gg~~~~~G~ 231 (290)
T PF01212_consen 157 HGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG--GAVLAGN---KEFIAKARRQRKRLGGGMRQAGV 231 (290)
T ss_dssp HT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS--EEEEEES---HHHHHHHHHHHHHHTHHHHHTTH
T ss_pred CceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc--ceEEEec---hHHHHHHHHHHHHhccCeeecce
Confidence 9999999999821 1121111111234477789999887655 2455666 6766554433332221111 11
Q ss_pred HHH------HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 270 SQH------LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 270 ~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
..+ ++...++. + .....+..++.+++.+.|+.+++
T Consensus 232 ~~a~~~~~~~~l~~l~~---~-~~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 232 LAAAELYQFAALRALEL---W-LERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp HHHHHHHHHHHHCHEEC---S-HHHHHCHHHHHHCHHHCHHEECE
T ss_pred eeeechhhHHHHHHHHh---h-HHHHHHHHHHHHHHHHHHHHCCC
Confidence 111 22223332 2 45556677778889999988776
No 358
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.76 E-value=1.1e-17 Score=153.27 Aligned_cols=289 Identities=15% Similarity=0.105 Sum_probs=182.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..+. ..++ -+|++.+++.+++.... .........+....+++.+.+..+-..+.+.+++|+++|++
T Consensus 13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve 90 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLN--YVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVE 90 (339)
T ss_dssp TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCS--SCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCCCccceecCCCccccchhHHHHhhhcc--cccccceeccchhhhhhhhhhccccccceeeeccCchHHHH
Confidence 4788999998653 4443 57999999999887632 12223444566777888887776445678999999999999
Q ss_pred HHHHHhc-------c-CCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCCCC----CCChHHHHHh
Q 015890 104 NIVLTLC-------D-AGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTL----HPDADWLEKT 158 (398)
Q Consensus 104 ~~~~~l~-------~-~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~----~~d~e~l~~~ 158 (398)
.+++... . ...+|+....+|++....+...+ ..+..+ |.+.... .-..+.+++.
T Consensus 91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 169 (339)
T PF00202_consen 91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFV-PFPDPAADEEEQACLNALEEL 169 (339)
T ss_dssp HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEE-ETTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccc-cCCccchhhhHHHHHHHHHHH
Confidence 9999876 1 23699999999998654332211 122233 3221100 0001113332
Q ss_pred hc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccccc
Q 015890 159 LE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKA 231 (398)
Q Consensus 159 l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~sK~ 231 (398)
+. ....+.+|+++..+...|.. .+++.+++|.++|++||+++|+||++ ++..|........ ..+++ +++|.
T Consensus 170 ~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv--~~gK~ 247 (339)
T PF00202_consen 170 IAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIV--TFGKG 247 (339)
T ss_dssp HHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEE--EEEGG
T ss_pred HHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccc--ccccc
Confidence 22 12236889999767666764 57788999999999999999999999 6566644322211 12244 55799
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
++ .|+++|.++.+ +++.+.+.......+++.++.+.+++.+.|+..+ +..++..+.-.+..+.|.+.-+..+.+
T Consensus 248 l~-gG~p~sav~~~---~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i 323 (339)
T PF00202_consen 248 LG-GGLPISAVLGS---EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLI 323 (339)
T ss_dssp GG-TTSSEEEEEEE---HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred hh-hhhhccccccc---chhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 97 77999999999 7777766555555678888999999999888622 334444444444455555333334554
Q ss_pred ccccCCccEEEEeeCC
Q 015890 310 AVKGGEGAIYLWARLP 325 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~ 325 (398)
.-+... |.++.+++.
T Consensus 324 ~~vrg~-Gl~~~ie~~ 338 (339)
T PF00202_consen 324 GEVRGI-GLMIGIELV 338 (339)
T ss_dssp EEEEEE-TTEEEEEES
T ss_pred EEEeee-CeEEEEEEE
Confidence 444455 555555553
No 359
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.75 E-value=1.2e-15 Score=138.44 Aligned_cols=323 Identities=15% Similarity=0.090 Sum_probs=212.6
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFV 103 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~ 103 (398)
.++|+.| |...|++|++++.+.+.+... --.+.++.+.++.+.+.+.++++++++. +-+++..|+|.++.
T Consensus 5 ~~nF~aG--Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e 82 (364)
T PRK12462 5 QLNFSGG--PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred cceecCC--CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence 4566655 666789999999987755221 1122345567777777788888888843 34556677999999
Q ss_pred HHHHHhccCCCEEE-EeCCCCcC--hhhHHHhcCcEEEEeccC---CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 104 NIVLTLCDAGDSVV-MFAPYYFN--SYMSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl-~~~p~~~~--~~~~~~~~g~~~~~~~~~---~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
++...++.+|++++ +...++++ +...++.+| ++..+ .. ...+..++++.+ +..+..+.|.+++..+.|
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~-~~~~~~~~~~~p~~~~~----~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVV-WDGAASGYRTLPSLAEL----DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEe-cCcCCCCCCcCCCHHHh----ccCCCCcEEEEccCCCCc
Confidence 99999999999776 66667655 556677777 44433 21 112233455554 322235889999888889
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
|+.++ ++.+.++.++|+|.+. +.- .+...... +++..+..|.+|+|| ++.++.+ ++++++..
T Consensus 157 Gv~~~--------~~~~~~~~llvvD~sS~~~s--~pid~~~~--dvi~agsQKnlgP~G--ltvvivs---~~al~~~~ 219 (364)
T PRK12462 157 GLQFP--------DAAGLPDSPLIADMSSDFMS--RPFDVEAY--GMVYAHAQKNLGPAG--VTVAIIR---RALLERVP 219 (364)
T ss_pred eEecC--------cccccCCCeEEEEcCchhhC--CCCChHHc--cEEEeeccccCCCCc--eEEEEEC---HHHHhhcc
Confidence 99886 1222368999999888 533 23333333 477888999999777 4777777 56555433
Q ss_pred Hh------------hccCCCCcchHHHHHHHHHhcCC-ch--HHHHHHHHHHHHHHHHHHHhccCCCCcc--cc--CCcc
Q 015890 257 KV------------QDNIPICASIISQHLALYSLQTG-PE--WVTERVKDLVRNREIIREALSPLGEGAV--KG--GEGA 317 (398)
Q Consensus 257 ~~------------~~~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~--~~~~ 317 (398)
.. ......|++.+.+.++...++.. ++ .++.+.++.+++++.+++.+++.++... .. ....
T Consensus 220 ~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 220 DTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred ccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 21 11234578888888888887652 23 6788889999999999999988763111 11 2223
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+-+.+++... ....+|... ++++|+.-..|. ..-+.+|+|+-. .+.+.++++++-++++-++
T Consensus 300 mnv~f~~~~~-~l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 300 MNVAFRFRQP-RLDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ceEEEEcCCH-HHHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4455566532 124455554 468999886664 346779999766 7888887777777766543
No 360
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.73 E-value=9.1e-15 Score=147.75 Aligned_cols=330 Identities=13% Similarity=0.050 Sum_probs=213.7
Q ss_pred hHHHHHHHHHHcCCCeEEcCC-ccCCCCCcHHHHHHHHHhhcC-CCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWD-PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~-g~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
...+.+++....+..+.+|.. |.-+...|+.+++++.+...- ...+.|++. +|..+....+...+.++.|.+++++
T Consensus 89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~ana 168 (993)
T PLN02414 89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNA 168 (993)
T ss_pred HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhE
Confidence 344555555555455555553 444555778887887764431 224555543 5555555666666777779999999
Q ss_pred EEecChHHHHHHHHHHhc-cCC--CEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC-DAG--DSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~-~~g--d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
.++.++|++.++++.++. ++| ++|++++..|+.....+ +..|++++.+ +.+..+ ...+. +
T Consensus 169 SL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v-~~~~~~----------~~~~~--v 235 (993)
T PLN02414 169 SLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVA-DEKDFD----------YSSGD--V 235 (993)
T ss_pred eecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEe-cchhhc----------cccCc--e
Confidence 999999999999887773 433 78999999998876544 4568888888 553211 01111 3
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC---CCcceeEE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG---MMGWRVGY 241 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~---~~G~r~G~ 241 (398)
..+++..|+ .+|.+.| +++|+++|+++|+++++ .++ +...+... +...+-++++++.+|+.+ ..|.+.|+
T Consensus 236 ~~vlvq~P~-~~G~v~d---v~~I~~~ah~~GaL~iV-aad~lal~~l~~-pge~GADi~vgsgqKwg~P~G~GGP~aGf 309 (993)
T PLN02414 236 CGVLVQYPA-TDGEVLD---YAEFVKNAHANGVKVVM-ATDLLALTMLKP-PGEWGADIVVGSAQRFGVPMGYGGPHAAF 309 (993)
T ss_pred EEEEEecCC-CCeEEcC---HHHHHHHHHHcCCEEEE-EECHHHhcCCCC-HhhccCcEEEECCCccccCCCCCCCCeeE
Confidence 455555554 4999998 99999999999999999 666 44433321 222345688999999872 23556899
Q ss_pred EEccCCcHHHHHHHHH-hh---------cc--------------CCCCcchHHHHHHHHHhc------CCchHHHHHHHH
Q 015890 242 IAYPSEVEGFATQLLK-VQ---------DN--------------IPICASIISQHLALYSLQ------TGPEWVTERVKD 291 (398)
Q Consensus 242 i~~~~~~~~~~~~l~~-~~---------~~--------------~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~ 291 (398)
+.++ +++.+.+.. +. .. -..+.|.....++.+.+. .+...+++..++
T Consensus 310 lavr---~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~r 386 (993)
T PLN02414 310 LATS---QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 386 (993)
T ss_pred EEEC---HHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 9998 455443210 00 00 012334433333333332 123446777888
Q ss_pred HHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890 292 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC 370 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~ 370 (398)
+.++..++.+.|+..|. ++..+....-+.+.++ +..++.++|+ ++||.++... .+.+|+|++. .+++|+
T Consensus 387 i~~la~~l~~~L~~~G~-~~~~~~~f~~vt~~~~----~~~~v~~~L~-~~gI~l~~~~----~~~lrvs~~e~~T~edI 456 (993)
T PLN02414 387 VHGLAGVFAAGLKKLGF-QVQSLPFFDTVKVKCS----DADAIADAAA-KVGINLRVVD----ANTVTVSFDETTTLEDV 456 (993)
T ss_pred HHHHHHHHHHHHhhcCC-ccCCCCCcCeEEEecC----CHHHHHHHHH-HCCCeeEEec----CCeEEEEeeccCCHHHH
Confidence 89999999999987664 5544332233444553 3577888775 8899776532 5679999999 899999
Q ss_pred HHHHHHHH
Q 015890 371 KAAADRLR 378 (398)
Q Consensus 371 ~~~~~~l~ 378 (398)
+.+++.|.
T Consensus 457 d~L~~~l~ 464 (993)
T PLN02414 457 DKLFKVFA 464 (993)
T ss_pred HHHHHHHc
Confidence 99999996
No 361
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.72 E-value=3.4e-14 Score=138.44 Aligned_cols=162 Identities=14% Similarity=0.114 Sum_probs=116.4
Q ss_pred HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEeccCC-CCC--CCCC
Q 015890 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS-SKT--LHPD 151 (398)
Q Consensus 76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~-~~~--~~~d 151 (398)
...+..++.+|.+ +-.++++|+|.+|.+++.+++++||+||++..||-+.... +-..|+.++++.|.. ..| ..++
T Consensus 178 eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~ 256 (720)
T PRK13578 178 DAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGID 256 (720)
T ss_pred HHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCC
Confidence 3333344444653 4588899999999999999999999999999999998885 889999999984432 222 1245
Q ss_pred h-----HHHHHhhccC-CC-------CeEEEEeCCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEeece---eccCCC--
Q 015890 152 A-----DWLEKTLETK-PT-------PKLVSVVNPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTY---FMYDGR-- 212 (398)
Q Consensus 152 ~-----e~l~~~l~~~-~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~l-~~~~~~~livDe~~---~~~~~~-- 212 (398)
. +.|+++++.. +. .++++|++|+. -|.+++ ++.|+++ ++.++ +|++|||| +.|...
T Consensus 257 ~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~ 331 (720)
T PRK13578 257 AHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMA 331 (720)
T ss_pred hHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcccc
Confidence 4 4488888754 21 48899998865 799999 8889888 67777 99999999 444331
Q ss_pred --ccccccC----CcEEEEcccccccCCCcceeEE-EEcc
Q 015890 213 --KHCCVEG----DHVVNLFSFSKAYGMMGWRVGY-IAYP 245 (398)
Q Consensus 213 --~~~~~~~----~~~i~~~s~sK~~~~~G~r~G~-i~~~ 245 (398)
+...... +.++++.|.||.+ +++.-+. +-.+
T Consensus 332 ~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 332 DCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred cCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 1111111 2348899999998 4665554 4443
No 362
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=1.6e-15 Score=135.10 Aligned_cols=316 Identities=17% Similarity=0.175 Sum_probs=208.9
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~ 122 (398)
+..+.+.+++...--..+... ...|..++-+.+.+..+++.|. ++.+++..|- ..+...+.+++.+|.-|+..+-.
T Consensus 155 ~ca~~~~~~~~kygl~~css~--~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mGf-~TNs~~~p~l~~~gsLIiSDelN 230 (519)
T KOG1357|consen 155 PCAEASLKSFDKYGLSRCSSR--HEAGTTEEHKELEELVARFLGV-EDAIVFSMGF-ATNSMNIPSLLGKGSLIISDELN 230 (519)
T ss_pred cCChHHHHHHHHhcccccccc--hhcccHHHHHHHHHHHHHhcCC-cceEEEeccc-cccccCcceeecCCcceeecccc
Confidence 355777777766432211111 1223334444444444433353 5567777763 77778888999999999999999
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----------cCCCCeEEEEe-CCCCCCccCCCHHHHHHHHH
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----------TKPTPKLVSVV-NPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----------~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~ 191 (398)
|.+....++.-|+.+..+ . ++ |++.||+.|+ +.+.-+.+++. .-....|.+.. +.++.+
T Consensus 231 HaSi~~GaRLSgAtiRVf-k---HN---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vva 300 (519)
T KOG1357|consen 231 HASLITGARLSGATTRVF-R---HN---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVA 300 (519)
T ss_pred chheeccccccCceEEEE-e---cC---CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHH
Confidence 999999999999877666 1 22 6677777765 11222454444 55667888888 999999
Q ss_pred HHHHcCCEEEEeece-ec---cCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 192 LCKAAGSWLVVDNTY-FM---YDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~---~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
+++++..+++.||+| .+ ..|... .....+.++.++++.|+||..| |++.++ +++++.++.......
T Consensus 301 lkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags---k~lid~lrt~s~~~~ 374 (519)
T KOG1357|consen 301 LKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS---KELIDYLRTPSPSAL 374 (519)
T ss_pred hhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc---HHHHhhhccCCCcee
Confidence 999999999999999 33 333322 2223456788999999999777 999999 788888765432211
Q ss_pred --CCcchHHHHHHHHHhcC-----CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHH
Q 015890 264 --ICASIISQHLALYSLQT-----GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 336 (398)
Q Consensus 264 --~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (398)
...+++........+.. +.+..++..+++.++..+++..|.+.++ .+++..++..+.+-+-.. .....+-.
T Consensus 375 yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gf-ivyG~~dSpVvplll~~~-~k~~~f~r 452 (519)
T KOG1357|consen 375 YATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGF-IVYGNNDSPVVPLLLYGP-AKIVAFSR 452 (519)
T ss_pred ecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcE-EEecCCCCCcceeeecCc-ccccHHHH
Confidence 23344444444555543 2356788889999999999999988777 666665554443333211 12345555
Q ss_pred HHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 337 WLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 337 ~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+++ +++|.+.-..+.. ....+|++.+. ++.|+++.+++.+.+.=
T Consensus 453 ~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 453 EML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred HHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 666 6677666555432 24678999888 88999998888887654
No 363
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.69 E-value=1.3e-13 Score=134.22 Aligned_cols=292 Identities=14% Similarity=0.089 Sum_probs=175.7
Q ss_pred HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCC--CCC-
Q 015890 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTL--HPD- 151 (398)
Q Consensus 76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~--~~d- 151 (398)
...+..++.+|.+ .-.++++|+|.+|.+++.+++.+||+||++..+|-+....+...|+.++++.|.. ..|. .++
T Consensus 199 eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~ 277 (714)
T PRK15400 199 EAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQ 277 (714)
T ss_pred HHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCc
Confidence 3333344444653 4588899999999999999999999999999999999999999999999984432 2221 234
Q ss_pred ----hHHHHHhhccCCCCe---EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-c-cccccC
Q 015890 152 ----ADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-K-HCCVEG 219 (398)
Q Consensus 152 ----~e~l~~~l~~~~~~~---~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~-~~~~~~ 219 (398)
.+.+++++...+..+ .++|++|+ --|.+++ ++.|.++|+.++ +++|||| +.|... + .++...
T Consensus 278 ~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ 351 (714)
T PRK15400 278 SEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSG 351 (714)
T ss_pred cccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhc
Confidence 799999998554334 78888885 4899999 888899988776 7999999 444331 1 222211
Q ss_pred -----CcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhccCCCCcchHHHHH-HHHHhcCCc-hHHHHHHHH
Q 015890 220 -----DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHL-ALYSLQTGP-EWVTERVKD 291 (398)
Q Consensus 220 -----~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~ 291 (398)
+.++++.|.||.+ +++.-+. +-.+.... .++++........++|+....| +..+..... +..++..+.
T Consensus 352 ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd--~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~ 427 (714)
T PRK15400 352 GRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVN--EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING 427 (714)
T ss_pred CCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 3348899999998 4665554 33332111 1334333322333444433333 222222111 122344444
Q ss_pred HHHHHHHHHHHhccCCC------CccccCC-----------------------------ccEEEEeeCCC---------C
Q 015890 292 LVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLPE---------K 327 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~------~~~~~~~-----------------------------~~~~~~~~~~~---------~ 327 (398)
..+....+++.+.+++. +.+..++ +..-+.+..+. .
T Consensus 428 ~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~ 507 (714)
T PRK15400 428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDF 507 (714)
T ss_pred HHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCcccccc
Confidence 44444555555544332 1222111 01112333322 1
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+..+..+.++| +++||.+.-.. ...+-+-++- .+.++++.++++|.++-+.
T Consensus 508 Gipg~~v~~~L-~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 508 GIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred CCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 23455666665 78999997643 4444444443 5888999898888876443
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=4.4e-14 Score=143.46 Aligned_cols=329 Identities=15% Similarity=0.109 Sum_probs=209.8
Q ss_pred hHHHHHHHHHHcCCCeEEc-CCccCCCCCcHHHHHHHHHhh-cCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELV-WDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l-~~g~~~~~~~~~v~~a~~~~~-~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
...+++++....+..+.+| +.|.-+.-.|+.+.+.+.+.- +-...+.|++ ++|.-+..-.+...+.++.|.+..++
T Consensus 62 e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~ana 141 (954)
T PRK05367 62 EALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANA 141 (954)
T ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhc
Confidence 3445555555444443333 345444445666656554421 1111334443 35666667777777888889999999
Q ss_pred EEecChHHHHHHHHHHhc-cC--CCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC-DA--GDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~-~~--gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
.+..++|++.+.++.++. .+ +++|++++..|+..... ++..|++++.+ +.+.+ ++ .+ . .
T Consensus 142 Sl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~-~~~~d-----~~------~~-~-~ 207 (954)
T PRK05367 142 SLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG-DAAKA-----LD------HD-D-V 207 (954)
T ss_pred cccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe-cCccC-----CC------cc-c-E
Confidence 999999999998888873 34 48999999999876644 46679999988 65431 11 11 2 4
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccc-----cCCCcceeE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKA-----YGMMGWRVG 240 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~r~G 240 (398)
.++++..| |.+|.+.| +++|+++|+++|+++++|..+....... .+...+-+++++|.+|+ +| |...|
T Consensus 208 ~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l~-~pge~GaDi~vgs~qkfg~P~g~G--GP~aG 280 (954)
T PRK05367 208 FGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLLT-PPGEMGADIAVGSAQRFGVPMGFG--GPHAA 280 (954)
T ss_pred EEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCCC-ChhhcCCCEEEeeCcccCCCCCCC--CCCEE
Confidence 56666666 56999998 9999999999999999997552221111 12223456889999998 54 44589
Q ss_pred EEEccCCcHHHHHHHHHh-hc-----------------------cCCCCcchHHHHHHHHH-----hc-CCchHHHHHHH
Q 015890 241 YIAYPSEVEGFATQLLKV-QD-----------------------NIPICASIISQHLALYS-----LQ-TGPEWVTERVK 290 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~-~~-----------------------~~~~~~~~~~~~~~~~~-----l~-~~~~~~~~~~~ 290 (398)
++.++ +++.+.+... .. .-..+.|.....++.+. +. .+...+++..+
T Consensus 281 flavr---~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~ 357 (954)
T PRK05367 281 YFAVR---DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIAR 357 (954)
T ss_pred EEEEC---HHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 99998 5555554210 00 00012222211111111 11 23455778888
Q ss_pred HHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 291 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
+...+..++.+.|+..+. ++..+....-+.++++ .+..++.++|+ ++||.++.- ..+.+|+|++. .+++|
T Consensus 358 ~~~~la~~l~~~L~~~G~-~~~~~~~f~~~~~~~~---~~~~~i~~~l~-~~gi~~~~~----~~~~l~is~~e~~t~~d 428 (954)
T PRK05367 358 RVHRLAAILAAGLRALGL-EVVHDSFFDTLTVEVG---GDAAAVLARAL-AAGINLRRV----DDDHVGISLDETTTRED 428 (954)
T ss_pred HHHHHHHHHHHHHHhcCc-ccCCCCCCCeEEEeCC---CCHHHHHHHHH-HCCceeccc----cCCEEEEEecccCCHHH
Confidence 889999999999977554 4433321223344443 25778888885 889988432 25689999998 88999
Q ss_pred HHHHHHHHH
Q 015890 370 CKAAADRLR 378 (398)
Q Consensus 370 ~~~~~~~l~ 378 (398)
++++++.|.
T Consensus 429 id~l~~~l~ 437 (954)
T PRK05367 429 LAALLAVFG 437 (954)
T ss_pred HHHHHHHHc
Confidence 999999997
No 365
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.67 E-value=9.6e-13 Score=128.29 Aligned_cols=290 Identities=13% Similarity=0.056 Sum_probs=171.6
Q ss_pred HHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCC--CCCCh-
Q 015890 77 LVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--LHPDA- 152 (398)
Q Consensus 77 l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~~~d~- 152 (398)
..+..++.+|.+ +-.++++|+|.+|.+++.+++.+||+||++..+|-+....+-..|+.++++.|.. +.| ..++.
T Consensus 200 Ae~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~ 278 (713)
T PRK15399 200 AEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRR 278 (713)
T ss_pred HHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChh
Confidence 333344444653 4588899999999999999999999999999999999999999999999984432 223 12444
Q ss_pred ----HHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEeece---eccCC-Cc-ccccc-
Q 015890 153 ----DWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTY---FMYDG-RK-HCCVE- 218 (398)
Q Consensus 153 ----e~l~~~l~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-ivDe~~---~~~~~-~~-~~~~~- 218 (398)
+.++++++..+. |++++|++|+ --|.+++ ++.|.++| |+.+ ++|||| +.|.. .+ ..+..
T Consensus 279 ~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~ 351 (713)
T PRK15399 279 EFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSG 351 (713)
T ss_pred hccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhC
Confidence 899999985432 4689999885 4899999 77788877 5666 699999 44433 11 22221
Q ss_pred ---CCc-EEEEcccccccCCCcceeE-EEEccCCcHHHHHHHHHhhccCCCCcchHHHHH-HHHHhcCCc-hHHHHHHHH
Q 015890 219 ---GDH-VVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL-ALYSLQTGP-EWVTERVKD 291 (398)
Q Consensus 219 ---~~~-~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~ 291 (398)
.+. ++++.|.||.+ +++.-+ ++-.+.... .++++........+.|+....| +..+..... ...++..+.
T Consensus 352 ~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd--~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~ 427 (713)
T PRK15399 352 ERVPGKVIFETQSTHKML--AAFSQASLIHIKGEYD--EETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINR 427 (713)
T ss_pred CCCCCeeeeeeeehhccc--cccchheeeeecCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 122 34488999998 466555 444443111 2344433332333444433333 222222111 122333344
Q ss_pred HHHHHHHHHHHhccCCC------CccccCC-----------------------------ccEEEEeeCC---------CC
Q 015890 292 LVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLP---------EK 327 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~------~~~~~~~-----------------------------~~~~~~~~~~---------~~ 327 (398)
..+....+++.+.+++. +.+..++ +..-+.+..+ +.
T Consensus 428 ~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~ 507 (713)
T PRK15399 428 SVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEE 507 (713)
T ss_pred HHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccC
Confidence 44444444444433221 1222110 0111223332 11
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+..+..+.++| +++||.+.-.. ...+-+-++- .+.++++.+++.|.++-+.
T Consensus 508 Gi~g~~l~~~L-~e~gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 508 GIPAALVAKFL-DERGIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred CCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 24566677765 68999997643 3444444443 5888999998888876443
No 366
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.67 E-value=1.5e-14 Score=133.76 Aligned_cols=273 Identities=16% Similarity=0.189 Sum_probs=180.1
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-------CcEEEecChHHHHHHHHHHhcc-----
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD----- 111 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-------~~v~~~~g~t~a~~~~~~~l~~----- 111 (398)
.++.++..+.....+.....|...+...++++.+.+++.+.+|.+. ..-++|+|+|+++..++.+..+
T Consensus 51 ~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 51 SPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhh
Confidence 3555555555444454566676677889999999999999998762 3478899999999988876531
Q ss_pred ---CC-----C-EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc---C-CCCeEEEEeCCCCCCc
Q 015890 112 ---AG-----D-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---K-PTPKLVSVVNPGNPSG 178 (398)
Q Consensus 112 ---~g-----d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---~-~~~~~v~i~~p~nptG 178 (398)
.| . .|++++-+|.++..++..+|+.++.+ |++++ +.+|.++|+++++. + ..|-+|+.+.++..+|
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I-~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKI-PTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE--BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhcccccccccccccccccccHHHHhcceeeeEEEEe-cCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 12 2 56677779999999999999999999 88875 47899999998862 2 2134667778889999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCC-Ccccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 179 TYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDG-RKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~-~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
.+-| +++|+++|+++++|++||.+| . .... ....... ...+=+..+.||+++ ..+.+|+++.++ +....
T Consensus 209 a~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~--~~~l~ 282 (373)
T PF00282_consen 209 AIDP---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD--KSDLR 282 (373)
T ss_dssp BB-S---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS--GGGHH
T ss_pred cccC---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhc-CCccceeEEeec--ccchH
Confidence 9988 999999999999999999999 1 1211 1111111 111233558999997 556899998887 43333
Q ss_pred HHHH----hhc-------------cCCCCcc-hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 254 QLLK----VQD-------------NIPICAS-IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 254 ~l~~----~~~-------------~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
.... +.. ..+...+ ......+...+.. +.+.+.++.++..+.++++.+.+++.+.+++..+
T Consensus 283 ~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 283 DAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp GGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred HHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 2110 000 0011111 2233333334432 5577889999999999999999999887677665
Q ss_pred CccEEEEeeC
Q 015890 315 EGAIYLWARL 324 (398)
Q Consensus 315 ~~~~~~~~~~ 324 (398)
+..+.+++++
T Consensus 363 ~~~~~vcFr~ 372 (373)
T PF00282_consen 363 PDLNIVCFRY 372 (373)
T ss_dssp TSSSEEEEEE
T ss_pred CCceEEEEEe
Confidence 5466666553
No 367
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.66 E-value=3.8e-13 Score=125.91 Aligned_cols=297 Identities=16% Similarity=0.178 Sum_probs=188.6
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CC-CC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS-KT 147 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~-~~ 147 (398)
..+..+..++.+ |.+ ...++++|+|.|+..++.+++.+||.||++.++|-+....+-..|+.++++.|. ++ -|
T Consensus 72 i~eAqe~aA~~f----gAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 72 IKEAQELAARVF----GAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred HHHHHHHHHHHh----CCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence 344555555544 543 357889999999999999999999999999999999998888999999988333 22 22
Q ss_pred --CCCChHHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCc-cccccCC
Q 015890 148 --LHPDADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRK-HCCVEGD 220 (398)
Q Consensus 148 --~~~d~e~l~~~l~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~-~~~~~~~ 220 (398)
..++.+.+++.+..++.. +++++++|+. -|++++ +++|.++++..++|+.+|+++ +.+.+.. .+....+
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~ 222 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGG 222 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcC
Confidence 357999999988866656 8899988865 799999 899999999999999999999 3433322 2233356
Q ss_pred cEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-----CchHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----GPEWVTERVKDLVR 294 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~ 294 (398)
.++++.|.||.++ ++..+. +-.+++-.--.+++.........+.+.....|....-+. +....++..+..-+
T Consensus 223 ~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~ 300 (557)
T COG1982 223 ADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAID 300 (557)
T ss_pred ceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 7889999999985 665554 444421011123443333333444444444443333211 12222333555556
Q ss_pred HHHHHHHHhccCCCCccccCC---------------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890 295 NREIIREALSPLGEGAVKGGE---------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 353 (398)
.++.+++...+.+++.+..+. +..-+.+..++.+..+..+..+| +++||...-..
T Consensus 301 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L-~e~gii~e~~~--- 376 (557)
T COG1982 301 FRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYL-REHGIIPEETG--- 376 (557)
T ss_pred HHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHH-HHcCCeeeecC---
Confidence 666666666666654443332 11223455555566788888877 57777765432
Q ss_pred CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 ~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
...+-+-+.. ...+....++.|.++.+.
T Consensus 377 -d~~~lll~~~-~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 377 -DYSNLLLFSP-GIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred -CceeeEEeee-ccchHHHHHHHHHHHHHh
Confidence 2222233322 225555666666666663
No 368
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.1e-14 Score=125.81 Aligned_cols=336 Identities=17% Similarity=0.134 Sum_probs=224.0
Q ss_pred HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
-+|++++||+... -.+...+++.+.+...+.+.+ .+-|+..+-.-.+.+.+++++ |. .+.|++..|-
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G~-E~aivYs~gF- 164 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----GT-EDAIVYSYGF- 164 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----CC-cceeeecccc-
Confidence 3678889988754 455678888888777776643 233655555667889999998 43 4567777666
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC----------C-CeEE
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----------T-PKLV 168 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----------~-~~~v 168 (398)
.++..++.+++++||-|.+.+-..+.....++...-.+.++.+ .|++.++..+.+.+ . -+.|
T Consensus 165 ~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfi 237 (467)
T KOG1358|consen 165 STIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFI 237 (467)
T ss_pred chhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEE
Confidence 7888899999999999999988877777777766666666612 26677766654221 1 2345
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc----ccCCcEEEEcccccccCCCcceeE
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
++..-.-++|.+.| +.+|.++..+|...+|+||.+ |+- .|..... ...+.+++++|+.-+++-.| |
T Consensus 238 v~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---g 311 (467)
T KOG1358|consen 238 VVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---G 311 (467)
T ss_pred EEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---c
Confidence 55656677999999 999999999999999999999 443 3332221 12355688999999886554 6
Q ss_pred EEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL 320 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 320 (398)
++.++.. --..+++.....-++.+.++....++..++.. .++-.++.+.++.....+...|....+..+.+...+..+
T Consensus 312 Fc~G~~~-i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~ 389 (467)
T KOG1358|consen 312 FCAGKSF-IADHQRLSGSGYCFSASLPPYLAGAAIKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPII 389 (467)
T ss_pred eeeccee-eEeeeeccccceeeeccCchhhhhhHHHHHHH-HhhCcchhhhhhccccccchhhhcCCceEEecCcCCcee
Confidence 6666521 11223444333334445566666666666664 333344666666666777777776554466655557777
Q ss_pred EeeCCCCCCC-------hHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 321 WARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 321 ~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+.+.+...+ .+++++..+.+ |+.+.....- .-+..+||++.. .+++|++++.+.|++...++
T Consensus 390 hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 390 HLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred eeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 7777653221 23456666544 7777544322 235689999999 89999999999999877654
No 369
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.65 E-value=3.7e-13 Score=122.94 Aligned_cols=330 Identities=13% Similarity=0.100 Sum_probs=208.3
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD 111 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~ 111 (398)
+|||-+-..--.++++.+++|.. + --.|..++....|++.+++.+. .+.+++++.++.+..+++..+++
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G------~E~alpthqGRgaE~Il~~~~~~ 111 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFG------YQYTIPTHQGRGAEQIYIPVLIK 111 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhC------CceEEECCCCchHHHHHHHhhcc
Confidence 55655443222378999999886 1 2358788888899999999883 45688898899999999999998
Q ss_pred -CCCEEEEeCC-------CCcC-hhhHHHhcCcEEEEeccCC---------CCCCCCChHHHHHhhccCC--CCeEEEEe
Q 015890 112 -AGDSVVMFAP-------YYFN-SYMSFQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVV 171 (398)
Q Consensus 112 -~gd~Vl~~~p-------~~~~-~~~~~~~~g~~~~~~~~~~---------~~~~~~d~e~l~~~l~~~~--~~~~v~i~ 171 (398)
+|+++++..+ .|+. ....+...|+.+..+ +.+ .....+|++.|++.+++.. .+..+...
T Consensus 112 ~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l-~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~t 190 (467)
T TIGR02617 112 KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV-YTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVAT 190 (467)
T ss_pred cccccccccccccccceEEEEecchHHHHHcCceeecc-cchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeee
Confidence 6777775443 3233 234567778776664 322 1234789999999998521 12233222
Q ss_pred -CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e-----------ccCCCccccc----cCCcEEEEcccccccCC
Q 015890 172 -NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCCV----EGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 172 -~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~~----~~~~~i~~~s~sK~~~~ 234 (398)
..|.-.|+.+|.+.++++.++|++||+.+++|.+. + .+.+.+.... ....+.+..|+||.+++
T Consensus 191 lt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA 270 (467)
T TIGR02617 191 ITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV 270 (467)
T ss_pred EEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC
Confidence 12334688999999999999999999999999987 3 1222221111 02234667799999976
Q ss_pred C-cceeEEEEccCCcH---HHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890 235 M-GWRVGYIAYPSEVE---GFATQLLKVQ-----DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 235 ~-G~r~G~i~~~~~~~---~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l 303 (398)
| | |++++++ + ++.++.+... ..+..+.+.-.+.+++..|.+. .+++..+..+. ++|.+.|
T Consensus 271 pvG---g~Lag~d--~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv----~yl~~~L 341 (467)
T TIGR02617 271 PMG---GLLCFKD--DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQV----QYLVNGL 341 (467)
T ss_pred ccc---ceEEecc--hhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHH----HHHHHHH
Confidence 6 4 6777775 5 4444443321 1223356666677776667652 24455554444 4555555
Q ss_pred ccCCCCccccCCccEEEEeeC-------CCCCCChHHHHHHHHHhcCeEEecCCCC--C---------C--CCeEEEEec
Q 015890 304 SPLGEGAVKGGEGAIYLWARL-------PEKHLDDFEVVRWLAHRHGVVVIPGGAC--G---------C--RGHLRISFG 363 (398)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~--~---------~--~~~iRi~~~ 363 (398)
.+.|. -+.. .||.-++++- |...-.+..+..+|-.+.||...--..+ + . -..+|+++.
T Consensus 342 ~~~Gv-pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip 419 (467)
T TIGR02617 342 EEIGV-VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP 419 (467)
T ss_pred HhCCC-cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence 55554 2233 4455555532 2111235567777777889875433322 1 0 157999988
Q ss_pred C--CCHHHHHHHHHHHHHHHHHH
Q 015890 364 G--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 364 ~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
+ -|.++++...+++....++-
T Consensus 420 Rrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 420 RATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred cccccHhHHHHHHHHHHHHHhhh
Confidence 8 58899999999998877653
No 370
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=3.6e-13 Score=117.15 Aligned_cols=357 Identities=17% Similarity=0.137 Sum_probs=231.3
Q ss_pred hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhh----
Q 015890 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQE---- 84 (398)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~---- 84 (398)
+.+.+.+.+.-+.+..+....-+.|--..|. .+..|.+|+-..+.+.-.-+|+- -.|-.++.+.+....+++
T Consensus 21 l~~~DPev~~ii~~Ek~RQ~~gieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALea 98 (477)
T KOG2467|consen 21 LEEVDPEVHDIIEKEKERQKRGIELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEA 98 (477)
T ss_pred hhhcChHHHHHHHHHHHhhhcceeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHH
Confidence 4456667777677777666677777766554 46888998888776532233422 134455666655544433
Q ss_pred cCCCCC----cEEEecChHHHHHHHHHHhccCCCEEE---EeCCCC--cChhhHHHhcCc-----EEEEeccCCCCCCCC
Q 015890 85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVV---MFAPYY--FNSYMSFQMTGV-----THILVGPCSSKTLHP 150 (398)
Q Consensus 85 ~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl---~~~p~~--~~~~~~~~~~g~-----~~~~~~~~~~~~~~~ 150 (398)
++++++ ||..-+|+ -|++.+..+++.|+++|. +|+.+| ++|..--+...+ +-.++ .+++....+
T Consensus 99 F~ldp~kWGVNVQp~SGS-PANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPY-kv~~~TG~I 176 (477)
T KOG2467|consen 99 FGLDPEKWGVNVQPYSGS-PANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPY-KVDPSTGYI 176 (477)
T ss_pred hCCCHHHCceeeccCCCC-chhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCce-eeCCCCCce
Confidence 577654 56655655 899999999999999987 455555 233321122222 22233 456666679
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s 227 (398)
|.|.||+.-..-. |++++.... .-...++ ..++.++|.+.|.+++.|-+| +...+.-.+++.+ -+|++.+
T Consensus 177 DYD~Le~~A~~fr-Pk~iiaG~S--aY~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTT 249 (477)
T KOG2467|consen 177 DYDKLEKTATLFR-PKLIIAGTS--AYSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTT 249 (477)
T ss_pred ehHHHHHHHHhcC-CcEEEeccc--cchhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeecc
Confidence 9999998766433 588875422 2234455 788888888999999999999 4444444444433 2477889
Q ss_pred cccccCCCcceeEEEEccCCcH------------HHHHHHHH-hhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHH
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLK-VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLV 293 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 293 (398)
.+|++ -|.|.|.|..+.+.+ ++-++++. .......++....+++++-+|.. ....+..+.++..
T Consensus 250 THKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~ 327 (477)
T KOG2467|consen 250 THKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVL 327 (477)
T ss_pred ccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 99987 588889887765321 12233322 22233345666667777777765 4566788999999
Q ss_pred HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC----
Q 015890 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG---- 364 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~---- 364 (398)
++.+.+.+.|...|...+.++.+...+.+++.....+. .-++++++.-+|.+.--..++ .|+.||++...
T Consensus 328 ~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dG-arvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsR 406 (477)
T KOG2467|consen 328 KNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDG-ARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSR 406 (477)
T ss_pred HHHHHHHHHHHHcCceEecCCccceEEEEeccccCCch-HHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhccc
Confidence 99999999999988855666665677788887655454 334555666677764444333 47899998443
Q ss_pred -CCHHHHHHHHHHHHHHH
Q 015890 365 -LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~ 381 (398)
..++|+++..+-|.+++
T Consensus 407 G~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 407 GFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CccHHHHHHHHHHHHHHH
Confidence 35677877777776665
No 371
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.61 E-value=6.6e-12 Score=121.56 Aligned_cols=340 Identities=12% Similarity=0.051 Sum_probs=212.8
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC----------
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA---------- 112 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~---------- 112 (398)
+.+|.++..+...+.++....|..++....+++.+.+++.+..|.+...-++|+|||.|+..++...++.
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 3567777766666777667777778888999999999999999987666678999999999877664321
Q ss_pred ------------------------------------------C------CEEEEeCCCCcChhhHHHhcCc---EEEEec
Q 015890 113 ------------------------------------------G------DSVVMFAPYYFNSYMSFQMTGV---THILVG 141 (398)
Q Consensus 113 ------------------------------------------g------d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~ 141 (398)
| -+++++...|+++..++..+|+ .++.+
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V- 252 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV- 252 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe-
Confidence 0 0578888889999999999998 58888
Q ss_pred cCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEeece--ec---cC
Q 015890 142 PCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTY--FM---YD 210 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~--~livDe~~--~~---~~ 210 (398)
|++++ +.+|++.|++.++ .+..+-+|+.+.++..+|.+-|.++|.+|++.++++|+ ++++|.+| +. +.
T Consensus 253 pvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~ 331 (608)
T TIGR03811 253 PVDSN-YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFL 331 (608)
T ss_pred ecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhc
Confidence 88765 5899999999886 23324567777889999999994444444443477898 69999999 21 11
Q ss_pred C-----Ccc--------------------cc-----c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 211 G-----RKH--------------------CC-----V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 211 ~-----~~~--------------------~~-----~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
. .+. .. . -...+=++..+||++. ..+.+|.++.++ +.+.+.+...
T Consensus 332 ~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd--~~~~~~~~~~ 408 (608)
T TIGR03811 332 DEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQD--IRMRDVISYF 408 (608)
T ss_pred cccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeC--HHHHHHHhcC
Confidence 1 000 00 0 0122234568999985 567889988887 4444433211
Q ss_pred hc-------c-------CCCCcchHH--HHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHHhccCC------CCcc--
Q 015890 259 QD-------N-------IPICASIIS--QHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLG------EGAV-- 311 (398)
Q Consensus 259 ~~-------~-------~~~~~~~~~--~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~-- 311 (398)
.. . .....+.+. ..++..+++. +.+.+.+..++..+.++++.+.|+..+ .+.+
T Consensus 409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~ 488 (608)
T TIGR03811 409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP 488 (608)
T ss_pred cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence 00 0 011112222 2333333332 456788888999999999998887742 2333
Q ss_pred ccCCccEEEEeeCCCCCCC----hHHHHHHHHHhcC----------eEEecCCCC----C-----------CC-------
Q 015890 312 KGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHG----------VVVIPGGAC----G-----------CR------- 355 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~g----------i~v~~g~~~----~-----------~~------- 355 (398)
..++..+.+++++.....+ ..++-.++.++.. +.+...... + ..
T Consensus 489 ~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~ 568 (608)
T TIGR03811 489 LTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRA 568 (608)
T ss_pred cCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccC
Confidence 3333366666665432222 2223333332211 112111100 0 00
Q ss_pred ---CeEEEEecC---CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 356 ---GHLRISFGG---LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 356 ---~~iRi~~~~---~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
..+|-++.. .+.+.++..++.|++++++..++
T Consensus 569 ~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (608)
T TIGR03811 569 GKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLEK 606 (608)
T ss_pred CceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHHh
Confidence 257777665 25577888999998888876653
No 372
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.9e-12 Score=111.25 Aligned_cols=346 Identities=14% Similarity=0.065 Sum_probs=222.7
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccCCCCC---cHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVVYWQP---PKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~---~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
..+..++..+....+.+.|+.++-...+ ..+..++..+.........+. ......++-+.+.+.+..+.|..+.++
T Consensus 17 dpl~~lr~~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Ev 96 (407)
T COG3844 17 DPLAKLRDRFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEV 96 (407)
T ss_pred CchhhhHhhccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCce
Confidence 4466677778777889999877644432 233344444433322111111 133445666788888888889999999
Q ss_pred EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhh-----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
+++.+++--++.++.+.+ .+|++||+++..-++... .+...+.. + +- -..+.++++++.+++..
T Consensus 97 vv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~---~~-~~~~~P~~~~~~~~dd~-- 167 (407)
T COG3844 97 VVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y---DL-EGVIAPRALEEAITDDV-- 167 (407)
T ss_pred EEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c---cc-eeeeChHHHHHhhccce--
Confidence 999999988888888765 458899998766554332 22332221 1 11 12456778999998775
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIA 243 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~ 243 (398)
.+|++++.+.-||+.++ +.+|-++++++|++++.|=+| .+.- +......+.++-+++..|.++. ||-..|..+
T Consensus 168 AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav--p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v 242 (407)
T COG3844 168 AVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV--PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFV 242 (407)
T ss_pred EEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc--ceeecccCCCeeeeeeceeccCCCCCceeEEe
Confidence 99999999999999999 999999999999999999888 3321 2222234455778888999852 554444444
Q ss_pred ccCCcHHHHHHHHH-------------------hhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHh
Q 015890 244 YPSEVEGFATQLLK-------------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 244 ~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l 303 (398)
.++..+.....+.. .......+.+..+.+++..+|+... -.+.+.+++.-...+.+.+.+
T Consensus 243 ~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLv 322 (407)
T COG3844 243 APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELV 322 (407)
T ss_pred ccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHH
Confidence 44211111111100 0111223556677777777777522 226677777777778887777
Q ss_pred ccC-C--CCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHH
Q 015890 304 SPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAA 374 (398)
Q Consensus 304 ~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~ 374 (398)
+.. + +..+..|. -|..+.+..+ ...++++.| .++||.. .|..++.+|++++- .+-.|+=.++
T Consensus 323 Ea~~~~~~l~l~tPr~~~~rGsqvS~~hp----~~~~V~qaL-i~rGVig----D~R~P~vlRfgftPlY~~~~DVw~AV 393 (407)
T COG3844 323 EARCEYYGLTLVTPRAHEERGSQVSLYHP----HGYQVMQAL-IDRGVIG----DFREPDVLRFGFTPLYVSFVDVWDAV 393 (407)
T ss_pred HhccccCCcEEeccchhhhccceeeEecC----cHHHHHHHH-HHcCccc----cccCCCeeeecCccceechhHHHHHH
Confidence 642 1 22444332 2455555666 366788877 4899965 34578999999876 6788999999
Q ss_pred HHHHHHHHHHh
Q 015890 375 DRLRRGLEELV 385 (398)
Q Consensus 375 ~~l~~~~~~~~ 385 (398)
+.|.++++...
T Consensus 394 ~~L~evL~t~a 404 (407)
T COG3844 394 DALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHhhc
Confidence 99999988754
No 373
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.59 E-value=3.2e-12 Score=114.06 Aligned_cols=310 Identities=18% Similarity=0.129 Sum_probs=196.5
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEe--cChHHHHHH---HHHHh-ccCC----CEEEEeCCCCcChh
Q 015890 61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVT--AGANQAFVN---IVLTL-CDAG----DSVVMFAPYYFNSY 127 (398)
Q Consensus 61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~--~g~t~a~~~---~~~~l-~~~g----d~Vl~~~p~~~~~~ 127 (398)
.+.|.|. +|..++...+.+||++..|.+. |.+. +|+ ++=.. +++.. ...| +.+|+|+..|....
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGA-qGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP 171 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGA-QGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP 171 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCc-chhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence 5666663 6788899999999999888654 4444 333 32222 22222 2233 58999999998888
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~- 206 (398)
..+...|++++.+ +.+++| .+|+|+|++++.++. +++.|++||. .|.. .+.|.+|+++.+++|..+..|.+-
T Consensus 172 ASAam~G~~VV~V-~~~~~G-~VDlddLk~k~~~~~--AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANl 244 (496)
T COG1003 172 ASAAMAGFKVVVV-KCDENG-NVDLDDLRAKAEDNL--AALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANL 244 (496)
T ss_pred hhHhhcCceEEEE-ecCCCC-CccHHHHHHHhccce--eEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcch
Confidence 8899999999999 888776 689999999999775 9999999975 5665 567999999999999999999988
Q ss_pred eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHH-----hh---------------ccC
Q 015890 207 FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK-----VQ---------------DNI 262 (398)
Q Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~-----~~---------------~~~ 262 (398)
-..-|.-...+. +.+++=..++|.|+. +|...|-+.+. ..++.-+-. .. ...
T Consensus 245 NA~vG~~rPGd~-G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk---~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a 320 (496)
T COG1003 245 NAIVGLARPGDM-GFDVVHLNLHKTFCIPHGGGGPGAGPVGVK---AHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAA 320 (496)
T ss_pred hhhhcccccccc-ccceEEeecccccccCCCCCCCCCCceehH---hhccccCCCCcccCCCccccccCCCCccceeecc
Confidence 111222222111 223555578898853 34555666655 333322211 00 001
Q ss_pred CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCC----CCCCChHHHH
Q 015890 263 PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLP----EKHLDDFEVV 335 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~ 335 (398)
.++ |......+...+.. +.+.+++..+..--+++++...|+..-. ..+.+. ...=+.++.. +...+..++.
T Consensus 321 ~~G-s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~-~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA 398 (496)
T COG1003 321 PYG-SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYP-VPYTGENRVAHECILDARPLKKETGVRALDVA 398 (496)
T ss_pred ccC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCc-cccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence 112 22222333333332 4566777777777788999999986322 122222 1222344443 2335788999
Q ss_pred HHHHHhcCeEEecCCCC-CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 336 RWLAHRHGVVVIPGGAC-GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
++|+ ++|+.-..-++. --.+.+=|=..- .+.++++++++++.++.++..+.
T Consensus 399 KrLl-D~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 399 KRLL-DYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred HHHH-hcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9998 899987544332 134555555444 45677888888888877776543
No 374
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.56 E-value=3.3e-13 Score=114.43 Aligned_cols=345 Identities=14% Similarity=0.117 Sum_probs=204.5
Q ss_pred cCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
+|..++|--.+.-..+ .+|++.+|...++.... ...+ .. .++-+........+-+ -+.++|++++++|++++
T Consensus 45 ~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RF-lh---d~lv~cA~~l~stlPe--Lsvc~F~NSGSEANDLA 118 (452)
T KOG1403|consen 45 EGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRF-LH---DELVQCARTLTSTLPE--LSVCFFVNSGSEANDLA 118 (452)
T ss_pred CcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchh-hH---HHHHHHHHHHhhcCCC--ceEEEEecCCchhhHHH
Confidence 4555655544432222 58999999888876422 1122 22 2233333332222111 45689999999999999
Q ss_pred HHHhcc--CCCEEEEeCCCCcChhhHH--------Hhc-C---cEEEEeccCCCC--C-CC-----------CChHHHHH
Q 015890 106 VLTLCD--AGDSVVMFAPYYFNSYMSF--------QMT-G---VTHILVGPCSSK--T-LH-----------PDADWLEK 157 (398)
Q Consensus 106 ~~~l~~--~gd~Vl~~~p~~~~~~~~~--------~~~-g---~~~~~~~~~~~~--~-~~-----------~d~e~l~~ 157 (398)
++...+ +-..||+.+..|+++.... ..- + .+.+.+.|.++. | +. .-.+.+++
T Consensus 119 LRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~ 198 (452)
T KOG1403|consen 119 LRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKE 198 (452)
T ss_pred HHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHH
Confidence 987642 2235666677787755322 100 1 122322232210 0 11 11344555
Q ss_pred hhc----cCCCCeEEEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccc
Q 015890 158 TLE----TKPTPKLVSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFS 229 (398)
Q Consensus 158 ~l~----~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~s 229 (398)
.++ ....+++.+..+-++..|.++|+ ...+.+++..+.+|...|.||++ |+.-|... ....++.+..+-++.
T Consensus 199 I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg 278 (452)
T KOG1403|consen 199 ICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG 278 (452)
T ss_pred HHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheec
Confidence 554 33335566666778889987655 47899999999999999999999 66555432 233344444566899
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhc-c
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALS-P 305 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~-~ 305 (398)
|-+| .|.+++.++.. +++.+.+.. .....+++.|+.+.+++.+.++.. ++.+....++.-.....+...++ +
T Consensus 279 KpmG-NGhPVa~Vatt---keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~k 354 (452)
T KOG1403|consen 279 KPMG-NGHPVAAVATT---KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQK 354 (452)
T ss_pred ccCC-CCCeeeEEecc---HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 9998 99999999999 888888865 334457888999999888888752 23333333333333222222222 2
Q ss_pred CCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 306 LGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
...+--+.+. |+|+-+++-+.. ..+.-++.+|-+.++|.+..-.. ..+.+.|-... .+++..++.+..|
T Consensus 355 h~~IGDvRGv-GLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~l 431 (452)
T KOG1403|consen 355 HECIGDVRGV-GLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGL 431 (452)
T ss_pred ccceeccccc-eEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHH
Confidence 3333333344 788888774322 12334566777777888865321 13446665333 5788888888888
Q ss_pred HHHHHHHh
Q 015890 378 RRGLEELV 385 (398)
Q Consensus 378 ~~~~~~~~ 385 (398)
.+++.-+.
T Consensus 432 d~iLT~me 439 (452)
T KOG1403|consen 432 DEILTVME 439 (452)
T ss_pred HHHHHHHH
Confidence 88877443
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.55 E-value=8.3e-12 Score=125.07 Aligned_cols=331 Identities=11% Similarity=0.100 Sum_probs=210.5
Q ss_pred hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHHHhh-cCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKELV-WDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~~~~-~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
...+.+++....+..+.+|- .|.-+...|+.+.+.+.+-- +-...+.|++ ++|.-+..-.+...+.++.|.+..|.
T Consensus 50 e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNa 129 (939)
T TIGR00461 50 EALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANA 129 (939)
T ss_pred HHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhh
Confidence 44455555655555554544 45555556788876655421 1111344443 35666666666777888889998898
Q ss_pred EEecChHHHHHHHHHHhc---cCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
-+..++|++.++++.+.. +++++|++++..|+.+...+ +..|++++.+ |+++|++.+ + .
T Consensus 130 Sl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~--~ 195 (939)
T TIGR00461 130 SLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--D--V 195 (939)
T ss_pred hccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--C--E
Confidence 999999999998877753 23479999999998877544 4778888776 344566655 2 4
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCC----CcceeEE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGY 241 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~ 241 (398)
.++++.+|++ .|.+.+ +++|+++++++|.+++++.-........... ..+.+|++++ +|.||. +|.-.|+
T Consensus 196 ~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg-e~GaDi~vg~-~q~fg~p~g~GGP~aG~ 269 (939)
T TIGR00461 196 FGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMALTLLTPPG-HYGADIVLGS-SQRFGVPMGYGGPHAAF 269 (939)
T ss_pred EEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHhCCcCCHH-HcCCcEEeeC-CCccCCCCCCCCCceee
Confidence 7888888865 788876 9999999999999999954333322222222 2234455554 344443 3555788
Q ss_pred EEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHHHHHHH--HhcCCchHHHHHHHH
Q 015890 242 IAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQHLALY--SLQTGPEWVTERVKD 291 (398)
Q Consensus 242 i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~ 291 (398)
+.++ +++...+ ++.+...+.|.+....+..+. +.-.+.+.+++..++
T Consensus 270 ~a~~---~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~ 346 (939)
T TIGR00461 270 FAVK---DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARR 346 (939)
T ss_pred eeec---HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 8877 4444433 111111222333333332222 222356778888999
Q ss_pred HHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890 292 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC 370 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~ 370 (398)
...+..++.+.|++.|. ++..+.-..-+.++++. .+..++.++++ ++||.++.. ..+.+++|+.- .+.+|+
T Consensus 347 ~~~~a~~l~~~L~~~G~-~~~~~~fF~~~~v~~~~--~~~~~i~~~~~-~~gi~l~~~----~~~~i~~s~~E~~t~~di 418 (939)
T TIGR00461 347 IHSLTSILANGLENDPH-ELINKTWFDTLTVKVGN--GISSELLKAAE-EFNINLRAV----DTTTVGIALDETTTKADV 418 (939)
T ss_pred HHHHHHHHHHHHHhCCC-cccCCCccceEEEEeCC--CCHHHHHHHHH-HCCCeeeec----CCCEEEEEeecCCCHHHH
Confidence 99999999999998665 55443212224445531 24677888775 889998763 35689999998 889999
Q ss_pred HHHHHHHH
Q 015890 371 KAAADRLR 378 (398)
Q Consensus 371 ~~~~~~l~ 378 (398)
+.+++.+.
T Consensus 419 ~~l~~~~~ 426 (939)
T TIGR00461 419 ENLLKVFD 426 (939)
T ss_pred HHHHHHhc
Confidence 99999885
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.50 E-value=6.4e-12 Score=115.55 Aligned_cols=332 Identities=16% Similarity=0.172 Sum_probs=176.2
Q ss_pred hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHH-HhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVK-ELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~-~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
...+.+.+....+.....|- .|.-....|+.+.+.+. +.-+-...+.|++ ++|.-+..-.+...+.++.|.+.-|.
T Consensus 51 e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNa 130 (429)
T PF02347_consen 51 ELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANA 130 (429)
T ss_dssp HHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-S
T ss_pred HHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCC
Confidence 34444555544433333332 23333345565555233 2221111334444 45666666677777888889887777
Q ss_pred EEecChHHHHHHHHHHhc---cCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
-+-.+++++-++++.+.. ++.++|+++...|+.+...+ ...|++++.+ +.++.+. .| ++ .+
T Consensus 131 Slyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~-~~~~~~~-~d--------~~--~~ 198 (429)
T PF02347_consen 131 SLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV-PLDEDGT-TD--------DD--DT 198 (429)
T ss_dssp EBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE--BBTTCS-B---------ST--TE
T ss_pred CCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe-cccccCC-cc--------cc--Ce
Confidence 788888888887766653 23359999999998887744 4468899888 7665543 23 23 36
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC----CcceeE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVG 240 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G 240 (398)
.+|++.+||+ .|.+-+ +++|+++++++|.++++ .+- ....+...+.. .+.+|++++ +|.||. +|...|
T Consensus 199 a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge-~GADI~vg~-~Q~fg~p~~~GGP~~G 271 (429)
T PF02347_consen 199 AAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADPNALGGLKSPGE-YGADIVVGE-HQTFGIPMGFGGPGAG 271 (429)
T ss_dssp EEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG-GT-SEEEEC-CTTTT---CCC-S--E
T ss_pred EEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh-cCccEEeeC-CCCCcccCCCCCCCee
Confidence 9999999975 788877 99999999999999988 565 44434333322 334466665 777653 456678
Q ss_pred EEEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHH--HHHHHHhcCCchHHHHHHH
Q 015890 241 YIAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQ--HLALYSLQTGPEWVTERVK 290 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~ 290 (398)
++.+++ +++..+ ++.+.....|.+.... .++.++.-.+.+.+++..+
T Consensus 272 ~~a~~~---~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~ 348 (429)
T PF02347_consen 272 FFAVRE---DLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAE 348 (429)
T ss_dssp EEEE-G---GGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEhh---hhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 888874 443332 2222223344444333 3333333346688999999
Q ss_pred HHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 291 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
....++.++.+.|++.....+..+.--.++...... ....++.++.. ..|+... +...+++-+|+.- .+.+|
T Consensus 349 ~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~--~~~~~l~~~~~-~~gl~~~----~~~~~~~li~~TE~~t~ed 421 (429)
T PF02347_consen 349 RIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD--KEVEELLKRGI-EGGLNLR----YPDDGALLICVTETRTKED 421 (429)
T ss_dssp HHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS---HHHHHHHHTT-----EEEG----GG-SSEEEEE--TT--HHH
T ss_pred HHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc--HHHHHHHHHHH-hcCCCcc----ccCCCeEEEEccCCCCHHH
Confidence 999999999999998733233333212233333321 11222333332 3443331 2235588888887 67788
Q ss_pred HHHHHHHH
Q 015890 370 CKAAADRL 377 (398)
Q Consensus 370 ~~~~~~~l 377 (398)
+++++++|
T Consensus 422 id~lv~~f 429 (429)
T PF02347_consen 422 IDRLVEAF 429 (429)
T ss_dssp HHHHHH--
T ss_pred HHHHHhcC
Confidence 88887764
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.9e-11 Score=110.22 Aligned_cols=336 Identities=14% Similarity=0.118 Sum_probs=214.0
Q ss_pred CCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhc---c
Q 015890 36 AQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC---D 111 (398)
Q Consensus 36 ~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~---~ 111 (398)
..+...+. +++..+-+.+.+..-....-...++..++..+...+++..++.+++ -=..|.|+|+++..+-.... .
T Consensus 85 vS~~v~~~-~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~ 163 (491)
T KOG1383|consen 85 ASGVVYWG-EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRK 163 (491)
T ss_pred eeEEEecC-CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHH
Confidence 33444444 4445444444444311111112356677888888888888866543 23456888888555444421 1
Q ss_pred --CC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 112 --AG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 112 --~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.| ..++.+...+..+...++-+++++..+ |.++..+.+|+..+.+.+++++ ..++.+.|+.|+|.+-+ +
T Consensus 164 ~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V-~~~~~~~~~D~~k~~~~i~eNt--i~lv~~~~~~p~G~~e~---v 237 (491)
T KOG1383|consen 164 AQKGIDKPNIVTPQNVHAAFEKAARYFEVELREV-PLDEGDYRVDPGKVVRMIDENT--IMLVGSLPNFPTGEIED---V 237 (491)
T ss_pred hccCCCCccccchHHHHHHHHHHHhhEEEEEEee-eccccceEecHHHHHHHhccce--EEEEEEcCCCCccchhh---H
Confidence 22 368888888888999999999999999 9998889999999999999997 88888899999999877 8
Q ss_pred HHHHHHHHH-cCCEEEEeece--eccC----CCccccccCCcEEEE-cccccccCCCcceeEEEEccCCcHHHH------
Q 015890 187 KRISDLCKA-AGSWLVVDNTY--FMYD----GRKHCCVEGDHVVNL-FSFSKAYGMMGWRVGYIAYPSEVEGFA------ 252 (398)
Q Consensus 187 ~~i~~l~~~-~~~~livDe~~--~~~~----~~~~~~~~~~~~i~~-~s~sK~~~~~G~r~G~i~~~~~~~~~~------ 252 (398)
++|.++..+ +++.+++|.+- |... ......+..+.+..+ .+-|| +|+.--..+|++-++ +++.
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~--k~~~~~q~~~ 314 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRN--KELLPHQLFF 314 (491)
T ss_pred HHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccce-eeeeecCcEEEEEcc--cccccceEEE
Confidence 889998888 99999999887 3321 111111111222222 23455 455444478988775 3322
Q ss_pred --HHHHHhhccCCCC---cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 253 --TQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 253 --~~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
+++.......+.+ ++.-..++-+.++..+.+.+.+..+.+.+....+++.+++.+.+.+++.+ .+.++-+...
T Consensus 315 ~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp--~vs~~~~~s~ 392 (491)
T KOG1383|consen 315 HTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP--LVSFILFGSN 392 (491)
T ss_pred eccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC--cEEEEEccCC
Confidence 1111111111111 12222222333444467778899999999999999999998887887654 3333333333
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
..+-.++-+. +++.|..+..-. .|..+.+++.. ..++-.++++..|.++++++...
T Consensus 393 ~~~i~elsd~-l~~~GW~lnalq---~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 393 DVNIFELSDL-LRKKGWILNALQ---FPAAIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred ccchhhhhHH-HHhcCcCccccC---CCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 3455666664 468898875543 34466666655 34455788999999999888653
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.36 E-value=2.1e-10 Score=103.16 Aligned_cols=219 Identities=15% Similarity=0.094 Sum_probs=154.2
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEE-----
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVV----- 117 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl----- 117 (398)
.++++++++...+.......|.-..+...- ++...-..+.++. .+.++++++.+.|+..++.++..++..|+
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~~l~~g~~~~--R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~l 116 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELETDLKTGKRGA--RLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGEL 116 (395)
T ss_pred CCHHHHHHHHHHhcccceeeeecccchhhH--HHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccc
Confidence 579999999998876543345444333222 2222222223443 67899999999999999999987544443
Q ss_pred EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHHHHH
Q 015890 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT--YIPERLLKRISDLCKA 195 (398)
Q Consensus 118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l~~~ 195 (398)
++ +++++..+..+..|++++.+ -.. ..-...+++.++.+++ ++++=.+-+|. |. ..+ +++++++|++
T Consensus 117 V~-gg~~~v~d~~~~aG~~l~Ev-G~t---n~t~~~d~~~AIne~t--a~llkV~s~~~-~f~~~l~---~~~l~~ia~~ 185 (395)
T COG1921 117 VE-GGAFRVPDIIRLAGAKLVEV-GTT---NRTHLKDYELAINENT--ALLLKVHSSNY-GFTGMLS---EEELVEIAHE 185 (395)
T ss_pred cc-CCCCChhHHHHHcCCEEEEe-ccc---CcCCHHHHHHHhccCC--eeEEEEeeccc-ccccccc---HHHHHHHHHH
Confidence 33 67788999999999999887 222 1347889999999987 55443333332 33 244 7889999999
Q ss_pred cCCEEEEeece-eccC--CCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHH
Q 015890 196 AGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 272 (398)
Q Consensus 196 ~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 272 (398)
+|+++++|.+. ..-+ .........+.+++++|-.|.+| |.+.|.++++ +++++++++......+....+..+
T Consensus 186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk---KelI~~lq~~~l~Ralrv~K~tla 260 (395)
T COG1921 186 KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGK---KELIEKLQSHPLKRALRVDKETLA 260 (395)
T ss_pred cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcC--CCccceEech---HHHHHHHHhhhhhhhhhcCcHhHH
Confidence 99999999887 2211 11112222345688899999996 8889999999 899999988777677788888888
Q ss_pred HHHHHhcC
Q 015890 273 LALYSLQT 280 (398)
Q Consensus 273 ~~~~~l~~ 280 (398)
+..++|+.
T Consensus 261 ~l~~aLe~ 268 (395)
T COG1921 261 ALEAALEL 268 (395)
T ss_pred HHHHHHHH
Confidence 88888875
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.34 E-value=7e-09 Score=93.11 Aligned_cols=338 Identities=15% Similarity=0.111 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHcCCCeEEcCC-ccCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhhcCCCCC
Q 015890 17 PIMVQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKS 90 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~-g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~~~~~l~~~l~~~~~~~~~ 90 (398)
..++++++....++.+.+|-. |.-+.-.|+.+...+.+. ..+.+.|.| ++|.-+..-.....+..+.|.+..
T Consensus 61 e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA 138 (450)
T COG0403 61 EALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA 138 (450)
T ss_pred HHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc
Confidence 445555555555555555543 444555677777454331 223444443 345555444555567777798888
Q ss_pred cEEEecChHHHHHHHHHHhcc---CCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 91 SVMVTAGANQAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
|--+--++|++-++++.+..- +.++++++...|+.+...++. .|.+++.. +.+ |++.+++. ++..
T Consensus 139 NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~-~~~------d~~~l~~~-~~~~ 210 (450)
T COG0403 139 NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV-DAD------DLDDLESA-DDGD 210 (450)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe-ccc------hhhhhhhc-cccC
Confidence 888888999998888887652 247999999999888876644 34566555 332 77788888 4432
Q ss_pred CCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEccccc---ccCCCccee
Q 015890 164 TPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSK---AYGMMGWRV 239 (398)
Q Consensus 164 ~~~~v~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK---~~~~~G~r~ 239 (398)
+.++++..|+. .| ...+ ++++.+.++++|.++++=.--+...-.+ ++...+.+|++++..- -+|.+|..+
T Consensus 211 -~~gv~vQyP~~-~G~~~~d---~~~l~~~~h~~~al~~v~aDplaL~LL~-pPGe~GADIvvG~~QrfGvPmgfGGPha 284 (450)
T COG0403 211 -VFGVLVQYPNT-FGIVEED---LRALIEAAHSAGALVIVAADPLALGLLK-PPGEFGADIVVGSAQRFGVPMGFGGPHA 284 (450)
T ss_pred -eEEEEEecCCC-CCccchh---HHHHHHHHhhcCCEEEEEechhHhhccC-CccccCCceEEecCcccCCCcCCCCcce
Confidence 58999999874 56 4444 9999999999999887642112211111 1122345577777543 223356778
Q ss_pred EEEEccCCcHHHHH----------------------------HHHHhhccCCCCcchHHHHHHHH--HhcCCchHHHHHH
Q 015890 240 GYIAYPSEVEGFAT----------------------------QLLKVQDNIPICASIISQHLALY--SLQTGPEWVTERV 289 (398)
Q Consensus 240 G~i~~~~~~~~~~~----------------------------~l~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~ 289 (398)
|++.+.+ ++.. ++++.+...+.|.+....+.++. +.-.+.+.+.+..
T Consensus 285 g~fA~~~---~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA 361 (450)
T COG0403 285 GYFAVKD---EFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIA 361 (450)
T ss_pred eeeeEhH---hHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 8887773 3332 22333333444444333333222 2223667889999
Q ss_pred HHHHHHHHHHHHHhccCCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890 290 KDLVRNREIIREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE 367 (398)
Q Consensus 290 ~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~ 367 (398)
++..+...++.+.|++.+. .++.....-.-+.+++++ .....+..+. ...|+-++.- .++++-+++.- .+.
T Consensus 362 ~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~--~~~~~l~~~~-~~~G~~L~~~----~~~~~~ia~tEt~t~ 434 (450)
T COG0403 362 ERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE--EVAEALLAAA-IAGGINLRRV----DADTVLIALTETTTK 434 (450)
T ss_pred HHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch--hHHHHHHHHH-HhcCCceeee----cCCceEEEeecccCH
Confidence 9999999999999996552 244433212234555553 1234444444 3667776553 24577778777 567
Q ss_pred HHHHHHHHHHHHH
Q 015890 368 DDCKAAADRLRRG 380 (398)
Q Consensus 368 ~~~~~~~~~l~~~ 380 (398)
++++.+++.+...
T Consensus 435 ~~i~~l~~~~~~~ 447 (450)
T COG0403 435 EDIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHHHHhhh
Confidence 7888777776543
No 380
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.33 E-value=6e-10 Score=98.22 Aligned_cols=196 Identities=19% Similarity=0.180 Sum_probs=117.6
Q ss_pred HHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe---cChHHHHHHHHHHhccCCCEEEE
Q 015890 46 KMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 46 ~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~---~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
..|++|+.+.--. .+.++|+.. +.=|+.+.+.+.+.++.+. -++- -|+|+|+..++.++++|||+++.
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~ 101 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVLRPGDELLS 101 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--TT-EEEE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcCCCCCeEEE
Confidence 4556655543211 124455543 2345555555555556532 2221 46789999999999999999985
Q ss_pred -eCCCCcChhh----------HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHH
Q 015890 119 -FAPYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLL 186 (398)
Q Consensus 119 -~~p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l 186 (398)
...-|..... .++.+|+....+ +..++| .+|.|.+++.+++++ |+|+|... ...+=..++.++|
T Consensus 102 ~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v-~L~~dg-~~D~~~i~~~~~~~t--k~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 102 ITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV-PLTEDG-TIDWEAIKKALKPNT--KMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp SSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE---B-TTS-SB-HHHHHHHHHTTE--EEEEEE-S-TTSSS----HHHH
T ss_pred cCCCchhhHHHHhCCCCCCCCChHHhCceeEEE-eecCCC-CcCHHHHHHhhccCc--eEEEEecCCCCCCCCCCCHHHH
Confidence 4555644443 346778888888 777665 689999999999765 99999843 4444446888999
Q ss_pred HHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc--eeEEEEccCCcHHHHHHHHH
Q 015890 187 KRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 187 ~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++++++++ .+++++||.+| |.-.-.+.. -+.+++.+|+=|..| +|+ -.||++++ ++++++...
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~---vGADl~aGSLIKNpG-GgiAptGGYIaGr---~~lVe~~a~ 247 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE---VGADLMAGSLIKNPG-GGIAPTGGYIAGR---KDLVERAAY 247 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG---GT-SEEEEETTSGGG-TTT-SS-EEEEES---HHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCccc---cchhheeccceeCCC-CCccCcCCEEech---HHHHHHHHh
Confidence 999999875 58999999999 554332222 234589999999987 554 35899999 899887643
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.27 E-value=1.5e-09 Score=96.77 Aligned_cols=315 Identities=14% Similarity=0.132 Sum_probs=191.6
Q ss_pred hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhcc--------CC-----CEEE-Ee
Q 015890 55 LVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD--------AG-----DSVV-MF 119 (398)
Q Consensus 55 ~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~--------~g-----d~Vl-~~ 119 (398)
+..+.+.+.|...+.+.-..+.+-..+.+..|.+.. +=++++|++-++..++.+... .| +-|+ ..
T Consensus 124 ~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS 203 (510)
T KOG0629|consen 124 STANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS 203 (510)
T ss_pred hccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec
Confidence 334444666766666665566666666665676653 667788887777777665431 12 2344 45
Q ss_pred CCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 120 APYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 120 ~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
+-+|++...++..+|+ .++.+ +.++.| .+++++||++|-+ +..|-.|..+..+.--|..-| |..|+++
T Consensus 204 eesHYSi~kaAa~lg~gtd~c~~v-~t~e~G-km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadi 278 (510)
T KOG0629|consen 204 EESHYSIKKAAAFLGLGTDHCIKV-KTDERG-KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADI 278 (510)
T ss_pred ccchhhHHHHHHHhccCCceeEEe-cccccC-ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHH
Confidence 7788899999999994 78888 888776 6899999999862 222455666666777788877 9999999
Q ss_pred HHHcCCEEEEeeceec---cCCC---ccccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----
Q 015890 193 CKAAGSWLVVDNTYFM---YDGR---KHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN---- 261 (398)
Q Consensus 193 ~~~~~~~livDe~~~~---~~~~---~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~---- 261 (398)
|++|++|+++|.++.+ .+.. ..... ..+ =+..+.+|.+| .++.++..+.+. ..+..+.......
T Consensus 279 C~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~~g-aplqCsa~l~r~--~gll~~Cn~~~A~YLFq 353 (510)
T KOG0629|consen 279 CEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKLMG-APLQCSAFLTRE--EGLLQRCNQMSAIYLFQ 353 (510)
T ss_pred HHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHhhc-CcchhhHHHHHH--HHHHHhhcccchhhhhc
Confidence 9999999999998811 1111 11111 122 23558899998 678888888874 3455554332210
Q ss_pred -------CCCCcchHHHHH-------HHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc--CCccEEEEee
Q 015890 262 -------IPICASIISQHL-------ALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGE-GAVKG--GEGAIYLWAR 323 (398)
Q Consensus 262 -------~~~~~~~~~~~~-------~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~--~~~~~~~~~~ 323 (398)
..-+.....|.. ...+++. +...+++.++++.++++++.+.+++.++ ..+.. |+..++.+..
T Consensus 354 ~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~ 433 (510)
T KOG0629|consen 354 QDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY 433 (510)
T ss_pred cCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc
Confidence 000111112211 2233332 4566899999999999999999998765 33333 4434444333
Q ss_pred CCCC---CCChH-----------HHHHHHHHhcCeEEecCCCCC-CCCeEEEEecC--CCHHHHHHHHHHHHHH
Q 015890 324 LPEK---HLDDF-----------EVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRG 380 (398)
Q Consensus 324 ~~~~---~~~~~-----------~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~ 380 (398)
+|+. ...+. .+-.+++ ++|-.-..=...+ .++++|+.++. .+..+++-+++.|...
T Consensus 434 vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 434 VPPSLRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred CchHhccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 3321 11111 2333444 4444332212121 35789998776 3777888887777653
No 382
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.23 E-value=1.4e-10 Score=92.50 Aligned_cols=90 Identities=18% Similarity=0.361 Sum_probs=72.2
Q ss_pred CCeEEcCCccCCCC-----------------CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC----CC
Q 015890 30 KNAVSLAQGVVYWQ-----------------PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LY 88 (398)
Q Consensus 30 ~~~~~l~~g~~~~~-----------------~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~ 88 (398)
.++|+|+.++|.+. .|+.+.++..+. ..|++..|..++|+++++|+.+.++ ++
T Consensus 43 ~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~ 116 (153)
T PLN02994 43 QGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVKFD 116 (153)
T ss_pred CceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccc
Confidence 55999998776332 223334444331 3488888999999999999998866 46
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~ 125 (398)
+++|++|+|++++++.++.+++++||.|+++.|+|++
T Consensus 117 pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 117 ADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 8899999999999999999999999999999999964
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.21 E-value=1.7e-08 Score=91.24 Aligned_cols=318 Identities=14% Similarity=0.105 Sum_probs=189.5
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhcCCC---------CCcEEEecChHHHHHHHHHHhc-------cCCC------------
Q 015890 63 KYGADEGLPELRDALVKKLNQENKLY---------KSSVMVTAGANQAFVNIVLTLC-------DAGD------------ 114 (398)
Q Consensus 63 ~y~~~~~~~~~~~~l~~~l~~~~~~~---------~~~v~~~~g~t~a~~~~~~~l~-------~~gd------------ 114 (398)
....++..++++..+.+|+.+..+++ +.-=++..+++++...++.+.. +.+.
T Consensus 104 tW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 104 TWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred eeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 34456788999999999999887653 1123344555577776666532 1221
Q ss_pred EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe--EEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK--LVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~--~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
.+...+-+|.+...++...|++...+ +.++ ++.++.+.|+++++++..-. -++++.--..||.+ .-+++.+|..+
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l-~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~c-a~D~l~elg~V 260 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRAL-PTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSC-AFDELEELGPV 260 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEe-eccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccc-ccccHHHhcch
Confidence 24456777778888888888898888 8876 78889999999998432101 12222222234433 33459999999
Q ss_pred HHHcCCEEEEeecee--ccCCCcccc-ccC--CcEEEEcccccccCCCcceeEEEEccCCc---------HHHHHHH--H
Q 015890 193 CKAAGSWLVVDNTYF--MYDGRKHCC-VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEV---------EGFATQL--L 256 (398)
Q Consensus 193 ~~~~~~~livDe~~~--~~~~~~~~~-~~~--~~~i~~~s~sK~~~~~G~r~G~i~~~~~~---------~~~~~~l--~ 256 (398)
|+++|+||++|.+|. .+.-..... ..+ ..+=+-...||++ +--+-+..+...++. +.+.+.- .
T Consensus 261 c~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~ 339 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG 339 (511)
T ss_pred hhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhee-EEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence 999999999999991 111111000 000 0011233456655 344445544444320 1111110 0
Q ss_pred HhhccCCCCcc------hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890 257 KVQDNIPICAS------IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 330 (398)
Q Consensus 257 ~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
.......+..+ +.-.+.....+ +-+.++++.+++.+.++.+.+.+.+-+-+.+..+..--.+++++......
T Consensus 340 ~~~Dyrhwqipl~rRfRSLKlWfv~R~~--Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ 417 (511)
T KOG0628|consen 340 SAPDYRHWQIPLGRRFRSLKLWFVLRSY--GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEI 417 (511)
T ss_pred cCCCccccccccccchhhHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHH
Confidence 00011111111 11111111111 23556777777777777887777776655666555444566677655556
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+.+.+++.....|.+.|.+ ..+.-.||++++. .++++++...+.|.+....+.+.
T Consensus 418 ne~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 418 NEALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred HHHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 77888888888889998865 2233469999988 67889999999999998886554
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.16 E-value=6.8e-11 Score=105.38 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=57.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHH-HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPEL-RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~-~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~ 122 (398)
.++++.+++.+.........|.-..|...- ...+.+.+....| .+..+++++..+|+.+++.++.. |.+|++....
T Consensus 18 l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGe 94 (367)
T PF03841_consen 18 LSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG--AEAALVVNNNAAAVLLALNTLAK-GKEVIVSRGE 94 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-cccccccccc
Confidence 568888888877666554555433322222 2334444554444 45667778887999998888864 5677766543
Q ss_pred C------cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC--ccCCCHHHHHHHHHHHH
Q 015890 123 Y------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--GTYIPERLLKRISDLCK 194 (398)
Q Consensus 123 ~------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt--G~~~~~~~l~~i~~l~~ 194 (398)
- +...+..+..|++.+.+ -... .-.+++++++++++| ++++-.+++|.. |..-. -.+++++++++
T Consensus 95 lVeiGgsFRip~vm~~sGa~lvEV-GttN---~t~~~Dye~AI~e~T--a~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~ 167 (367)
T PF03841_consen 95 LVEIGGSFRIPDVMRQSGARLVEV-GTTN---RTHLSDYEKAITENT--AALLKVHTSNFRIQGFTGE-VSLEELAELAK 167 (367)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred cccccccccccccccccccccccc-cccc---ccccccccccccccc--ccccccccccccccccccc-ccHHHHHHHHh
Confidence 3 33556778888888877 2211 225778999999887 777666666653 22211 13899999999
Q ss_pred HcCCEEEEeece--e-cc--CC---Cc--cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 195 AAGSWLVVDNTY--F-MY--DG---RK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 195 ~~~~~livDe~~--~-~~--~~---~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+||+++++|-.. + .. .+ .+ ......+.+++++|-.|.+| |...|.++++ +++++++++-.-...+
T Consensus 168 ~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk---k~lI~~lk~~pl~Ral 242 (367)
T PF03841_consen 168 EHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK---KELIEKLKKHPLGRAL 242 (367)
T ss_dssp HHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE---HHHHHHHHHHHHTTT-
T ss_pred hcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC---HHHHHHHhhCCCcceE
Confidence 999999999776 1 11 11 11 11223456688999999997 6778999999 8999998765545566
Q ss_pred CcchHHHHHHHHHhcCCc------------hHHHHHHHHHHHHHHHHHHHhcc
Q 015890 265 CASIISQHLALYSLQTGP------------EWVTERVKDLVRNREIIREALSP 305 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~l~~~l~~ 305 (398)
-......+++.++|+... ..+....+.++++++++...|+.
T Consensus 243 rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 243 RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp B--HHHHHHHHHHHHH-------------------------------------
T ss_pred eeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 677888888887776411 11233334455555566655554
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.10 E-value=1.1e-07 Score=95.39 Aligned_cols=327 Identities=14% Similarity=0.073 Sum_probs=196.0
Q ss_pred hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHHHh-hcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890 17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKEL-VWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV 92 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~~~-~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v 92 (398)
+..+.+++....++.+.+|- .|.-+.-.|+.+.+.+.+- -+-...+.|++ ++|.-+..-.+...+..++|.+..|-
T Consensus 65 e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNA 144 (954)
T PRK12566 65 AALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANA 144 (954)
T ss_pred HHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhh
Confidence 33444555544444455554 3445555677775655431 11111334443 35555555566666777788887776
Q ss_pred EEecChHHHHHHHHHHhc-c--CCCEEEEeCCCCcChhhHHH----hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 93 MVTAGANQAFVNIVLTLC-D--AGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~-~--~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
-+-.++|++-++++.+.. . +..+|+++...|+.+...++ ..|++++. +++++.++++ +
T Consensus 145 Sl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~--~ 209 (954)
T PRK12566 145 SLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA--V 209 (954)
T ss_pred hhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC--E
Confidence 677777777776555543 2 24689999999987776554 33445442 2344444443 5
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc---ccccCCCcceeEE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF---SKAYGMMGWRVGY 241 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~---sK~~~~~G~r~G~ 241 (398)
.+|++.+|+. .|.+-+ +++|.+++++.|.+++ +.+. +.....+.. ...+.+|++++. +=-+|.+|.-.|+
T Consensus 210 ~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~-~~~d~laL~ll~~P-ge~GADI~vG~~Q~fGvp~~~GGP~ag~ 283 (954)
T PRK12566 210 FGALLQYPDT-HGEIRD---LRPLIDQLHGQQALAC-VAADLLSLLVLTPP-GELGADVVLGSTQRFGVPMGYGGPHAAY 283 (954)
T ss_pred EEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEE-EEeCHHHHhCCCCh-hhcCCcEEeeCCCcCCCCCCCCCCCeee
Confidence 8899998864 788866 9999999999999866 4444 333332222 223445666642 2223334666899
Q ss_pred EEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHHHHHHHH--hcCCchHHHHHHHH
Q 015890 242 IAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQHLALYS--LQTGPEWVTERVKD 291 (398)
Q Consensus 242 i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~ 291 (398)
+.++ +++...+ ++.+...+.|.+....+.++.+ .-.+.+.+++..++
T Consensus 284 ~a~~---~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~ 360 (954)
T PRK12566 284 FACR---DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQR 360 (954)
T ss_pred eeeh---HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 8888 4444333 2222233344443333333332 22356778888999
Q ss_pred HHHHHHHHHHHhccCCCCccccCCccEE--EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHH
Q 015890 292 LVRNREIIREALSPLGEGAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 368 (398)
Q Consensus 292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 368 (398)
...+..++.+.|++.|. ++... .+| +.+++. .+..++..+.+ +.||-++-. ..+.+.||+.- .+.+
T Consensus 361 ~~~~a~~l~~~l~~~g~-~~~~~--~fF~~~~v~~~---~~~~~~~~~a~-~~~~n~r~~----~~~~~~~s~de~~~~~ 429 (954)
T PRK12566 361 VHRLTAILAAGLEAKGI-KRLNR--HFFDTLTLEVG---GAQAAIIESAE-AARINLRIL----GRGRLGVSLDETCDEA 429 (954)
T ss_pred HHHHHHHHHHHHHhcCC-ccccC--CccceEEEEcc---CCHHHHHHHHH-HCCCeeEEe----CCCeEEEEeCCCCCHH
Confidence 99999999999998664 44322 333 333442 13566666554 788877753 35678899888 7888
Q ss_pred HHHHHHHHHH
Q 015890 369 DCKAAADRLR 378 (398)
Q Consensus 369 ~~~~~~~~l~ 378 (398)
|++.++..+.
T Consensus 430 ~~~~~~~~f~ 439 (954)
T PRK12566 430 TVARLFDIFL 439 (954)
T ss_pred HHHHHHHHhc
Confidence 8988888884
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.09 E-value=1e-07 Score=84.35 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=188.7
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhcCCCCC-cEEEe-cChHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKS-SVMVT-AGANQAFV 103 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~-~g~t~a~~ 103 (398)
..+|+.| |...|+++++.+.+.+.+-...+++ .++...++-+...+.+..+++++.+ .|++. .|+|....
T Consensus 6 ~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence 4556655 6667899988887766542111111 2333445555555667777788644 45555 67788888
Q ss_pred HHHHHhccCCCEEEEeCCCCcCh-hhHHHhcCcEEEEec---cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNS-YMSFQMTGVTHILVG---PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~---~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
++..+|+.+...-.+....|... ..-++..+-.+.... .....+.-++++... +.++. .-|+.++-.+-+|+
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~--ayv~~~~NeTi~Gv 159 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDND--AYVHFCWNETISGV 159 (365)
T ss_pred HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCc--cEEEEecCCcccce
Confidence 88888886543202333333221 123444443211110 111233344544433 22222 44777766666787
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
-++. ...+. .+.++|.|... ... .+..... ..++..+..|.+|..| ++.++.+ ++++++++..
T Consensus 160 ~v~~--~p~~~-----~~~~~v~D~SS~ils--r~iDvsk--~dviyagaQKnlGpaG--ltvvIvr---~~~l~r~~~~ 223 (365)
T COG1932 160 EVPE--LPDIG-----SDGLLVADASSAILS--RPIDVSK--YDVIYAGAQKNLGPAG--LTVVIVR---PDLLERAESY 223 (365)
T ss_pred EccC--CCCCC-----CCceEEEecccHHhc--CCCChhH--cceEEEehhhccCccc--eEEEEEc---HHHHhccccc
Confidence 6552 22111 13789999766 221 2222222 2377889999999777 7888999 7888877553
Q ss_pred -------------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc---cCCccEEE
Q 015890 259 -------------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK---GGEGAIYL 320 (398)
Q Consensus 259 -------------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~~~~~~~ 320 (398)
......|++.+..+.....++. ....++...++-+++.+.|++.+.+.++..-. .....+.+
T Consensus 224 ~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV 303 (365)
T COG1932 224 TLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNV 303 (365)
T ss_pred CCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeE
Confidence 1122234555555555555543 23446777777888899999999887652221 22334556
Q ss_pred EeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 321 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
++.+.... -+..++..+ ++.|+..--| ....+.+|+++.. .+.++++.+++.++.+.+.
T Consensus 304 ~f~~~~~~-ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 304 TFTLVDAE-LDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred EEEcCcHH-HHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 66765321 244566655 4677766666 3456679999887 7889888888888877654
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.1e-06 Score=77.23 Aligned_cols=320 Identities=12% Similarity=0.105 Sum_probs=197.1
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-----CCEEEE
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----GDSVVM 118 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~-----gd~Vl~ 118 (398)
.+...+.+|..- --.|.-+.+.-.|.+++.+.+ | -+.++.++-+..|=++++..++++ |.+..+
T Consensus 60 ms~~qwaamm~G-----DEAYagsrs~~~L~~avkdif----G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~ 128 (471)
T COG3033 60 MTDKQWAAMMRG-----DEAYAGSRSYYALADAVKDIF----G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVA 128 (471)
T ss_pred ccHHHHHHHhcc-----chhhcccccHHHHHHHHHHhc----C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccc
Confidence 456666666543 234777788888888888887 4 356777877777877777777754 445666
Q ss_pred eCCCCcChh-hHHHhcCcEEEEeccCCC---------CCCCCChHHHHHhhccCCC--CeEEEEe-CCCCCCccCCCHHH
Q 015890 119 FAPYYFNSY-MSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETKPT--PKLVSVV-NPGNPSGTYIPERL 185 (398)
Q Consensus 119 ~~p~~~~~~-~~~~~~g~~~~~~~~~~~---------~~~~~d~e~l~~~l~~~~~--~~~v~i~-~p~nptG~~~~~~~ 185 (398)
++..|+... ...+..|..++-+ ++++ -...+|++.|++.|++-.. +-.|+++ ..|.-.|+-.+.+.
T Consensus 129 ~sN~~FdTTr~h~~~ng~~~~n~-~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n 207 (471)
T COG3033 129 FSNYHFDTTRGHIQINGATPRNV-YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMAN 207 (471)
T ss_pred cccceecchhHHHHhcCCccccc-cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHh
Confidence 777776544 3445666655544 3332 1235799999999984220 2334444 55667888899999
Q ss_pred HHHHHHHHHHcCCEEEEeeceec------cCCC-cc---cc-------ccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890 186 LKRISDLCKAAGSWLVVDNTYFM------YDGR-KH---CC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~~~------~~~~-~~---~~-------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~ 248 (398)
++++.++|++|+++++.|.+.|. ..-. .. +. .++.+ -++-|.-|-- +..+ .|+++.+++.
T Consensus 208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD-~~~mS~KKD~-lvnm-GGfl~~~D~~ 284 (471)
T COG3033 208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD-GCTMSAKKDG-LVNM-GGFLCFKDDS 284 (471)
T ss_pred HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh-hheeeccccc-eecc-ccEEEecCcc
Confidence 99999999999999999987721 1110 00 00 01211 2334555532 2111 2788888731
Q ss_pred H-HHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890 249 E-GFATQLLKVQ-----DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL 320 (398)
Q Consensus 249 ~-~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 320 (398)
- ++...++... ..+..+.+.-.+.+++..|.+ ..+|+..+..+++ +|.+.|.+.|. .+..|.||.-+
T Consensus 285 ~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~GV-pi~~paGGHav 359 (471)
T COG3033 285 FFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEAGV-PIVQPAGGHAV 359 (471)
T ss_pred HHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhcCC-eeEecCCCceE
Confidence 0 2444443321 122234455566666666665 2366666666555 45566666665 46667777766
Q ss_pred EeeCCC-------CCCChHHHHHHHHHhcCeEEecCCCCCC-------------CCeEEEEecC--CCHHHHHHHHHHHH
Q 015890 321 WARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGHLRISFGG--LVEDDCKAAADRLR 378 (398)
Q Consensus 321 ~~~~~~-------~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~~iRi~~~~--~~~~~~~~~~~~l~ 378 (398)
+++..+ ..-.+..+..+|-++.||...-...+.. -..+|+++.+ -+.++++..++.++
T Consensus 360 fvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~ 439 (471)
T COG3033 360 FVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFK 439 (471)
T ss_pred EeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHH
Confidence 665432 1123566777788899998876655421 1469999887 47888888888887
Q ss_pred HHHHH
Q 015890 379 RGLEE 383 (398)
Q Consensus 379 ~~~~~ 383 (398)
+..++
T Consensus 440 ~l~e~ 444 (471)
T COG3033 440 ALKEN 444 (471)
T ss_pred HHHhc
Confidence 76655
No 388
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.98 E-value=1.1e-07 Score=85.90 Aligned_cols=300 Identities=16% Similarity=0.092 Sum_probs=155.7
Q ss_pred HHHHHHHHhhhcCCC-CCcEEEecChHH-HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CC-CC
Q 015890 74 RDALVKKLNQENKLY-KSSVMVTAGANQ-AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS-KT 147 (398)
Q Consensus 74 ~~~l~~~l~~~~~~~-~~~v~~~~g~t~-a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~-~~ 147 (398)
...+...+-+..|+. ....++.+-+|. ++.+.+.++. ..++.|+.+.-.+.....++...|++++.+ |. .+ +.
T Consensus 58 tn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV-~~~~~~d~ 136 (389)
T PF05889_consen 58 TNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVV-ENVLEGDE 136 (389)
T ss_dssp HHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE--EEEETTE
T ss_pred HHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEe-eccCCCCe
Confidence 333333344445664 344556655533 3333444443 456899999999988888999999999888 43 22 22
Q ss_pred CCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCC--CccccccCCc
Q 015890 148 LHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDG--RKHCCVEGDH 221 (398)
Q Consensus 148 ~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~--~~~~~~~~~~ 221 (398)
..-|++.+++.+++ +..+.+.++++.+---|...+ ++++|+++|++||++.++-.|| . ...- .......+--
T Consensus 137 l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 137 LITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp EEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC
T ss_pred eeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc
Confidence 34478888888873 222456666665544445433 5999999999999999999999 3 1100 0000000112
Q ss_pred EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchH----HHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW----VTERVKDLVRNRE 297 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~ 297 (398)
.+++.|..|.| +-+..-+.+...+ +..+..+...-....+..+. .......+..+... +.++.+.+....+
T Consensus 215 da~vqS~dkNF-~VPvGgai~As~~--~~~i~~vs~~YpGRas~sp~--ld~~itLl~LG~~g~~~ll~~r~~~f~~l~e 289 (389)
T PF05889_consen 215 DAFVQSTDKNF-MVPVGGAIMASFD--PSGILAVSKEYPGRASASPS--LDLFITLLSLGCTGYGALLKERKASFPYLKE 289 (389)
T ss_dssp SEEEEEHHHHH-CEESSHEEEEESS--HHHHHHHHHTSHSHBTSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCE-EecCCCcEEEecC--HHHHHHHHHHhhhhhhcccc--hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 36788999988 3333335555554 77888776544332333332 22233333222222 3333334444444
Q ss_pred HHHHHhccCCCCccccCCccEEEEeeCCCCC---CC-hHHHHHHHHHhcCeEE----ecCCCC-------CCCCeEEEEe
Q 015890 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD-DFEVVRWLAHRHGVVV----IPGGAC-------GCRGHLRISF 362 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~ll~~~gi~v----~~g~~~-------~~~~~iRi~~ 362 (398)
++.+.-++.+......|.+...+.+.++... .. ...+-..| ..+||.- .+.... +...++-++.
T Consensus 290 rl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~L-f~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As 368 (389)
T PF05889_consen 290 RLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSML-FKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS 368 (389)
T ss_dssp HHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHH-HHTTEESSEEEETSSCEEETTSS--SSSEEEEEE
T ss_pred HHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHH-HhCCcccceeeccCCCcccccCCCCchHHHHHHH
Confidence 4444444444311122333333444443221 11 23444544 5776642 222111 1236787754
Q ss_pred cC-CCHHHHHHHHHHHHHHHH
Q 015890 363 GG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 363 ~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.. .+.+|++.++++|.++++
T Consensus 369 aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 369 AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -TT--HHHHHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHhC
Confidence 44 799999999999999874
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.7e-06 Score=74.26 Aligned_cols=179 Identities=17% Similarity=0.218 Sum_probs=121.1
Q ss_pred CCCCCC-CCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEEeC-CCCcChh---------
Q 015890 61 ISKYGA-DEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFA-PYYFNSY--------- 127 (398)
Q Consensus 61 ~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~-p~~~~~~--------- 127 (398)
.++|+. +.|.+.|.+..++-+ +.+.. ...+.+ +|+|+..++..+++|||+.+... .-|....
T Consensus 57 stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~ 131 (416)
T COG4100 57 STGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEG 131 (416)
T ss_pred CCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCC
Confidence 344544 446666666666655 54322 334445 45999999999999999988543 3343333
Q ss_pred -hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHH--cCCEEEEe
Q 015890 128 -MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKA--AGSWLVVD 203 (398)
Q Consensus 128 -~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~--~~~~livD 203 (398)
..++.+|.....+ |...+| .+|.+.++..+++++ |+|.|... ....--.++.+++++++++.++ .|++++||
T Consensus 132 ~gSL~dfgi~Y~~v-~Lt~~g-kiD~~~v~~~i~~~t--kli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 132 QGSLKDFGIKYKAV-PLTADG-KIDIQAVKTAISDRT--KLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred cccHHHhCcceeec-ccccCC-cccHHHHHHhcCccc--eEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 2456677777777 666555 789999999999887 99998743 2222224677889999998875 47999999
Q ss_pred ece--eccCCCccccccCCcEEEEcccccccCCCcc--eeEEEEccCCcHHHHHHH
Q 015890 204 NTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 204 e~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~i~~~~~~~~~~~~l 255 (398)
.+| |.-.-.+... +.+++.+|+-|.-| +|+ -.||+.++ .++++..
T Consensus 208 NCYGEFvE~~EPt~v---GaDliAGSLIKNpG-GgiaktGGYiaGk---~~~ve~~ 256 (416)
T COG4100 208 NCYGEFVEEKEPTHV---GADLIAGSLIKNPG-GGIAKTGGYIAGK---AELVEAA 256 (416)
T ss_pred ccchhhhhccCcccc---chhhhccceeeCCC-Cceeeccceeech---HHHHHhh
Confidence 999 5543322222 34577899999886 554 24788888 7787754
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.82 E-value=3.5e-06 Score=72.63 Aligned_cols=339 Identities=12% Similarity=0.028 Sum_probs=190.3
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC-CCCCCCCCCCc---HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP-SISKYGADEGL---PELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~~~---~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
.++.+.|..++-.+. |....+.+.+.++.= ....|+...|- ...-+.+-..+++.-|...++|.+.++-|.-+..
T Consensus 65 d~~~iYlcGNSLGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~ 143 (465)
T KOG3846|consen 65 DKPVIYLCGNSLGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHS 143 (465)
T ss_pred CCCeEEEeccccccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHH
Confidence 456777776665553 555555555444320 01111111110 1112233344444458888899999999999999
Q ss_pred HHHHhccCC---CEEEEeCCCCcC----hhhHHHhcCcE----EEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeC
Q 015890 105 IVLTLCDAG---DSVVMFAPYYFN----SYMSFQMTGVT----HILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVN 172 (398)
Q Consensus 105 ~~~~l~~~g---d~Vl~~~p~~~~----~~~~~~~~g~~----~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~ 172 (398)
++.++.+|- -+|++..-.|++ ....++..|.. .+.+.|.. ....+..+++.+.|+ ++..+++|+++.
T Consensus 144 Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE-GEetlRteDILd~IEkngDeiA~v~fSG 222 (465)
T KOG3846|consen 144 LLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE-GEETLRTEDILDTIEKNGDEIALVCFSG 222 (465)
T ss_pred HHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc-cccchhHHHHHHHHHhcCCeEEEEEeec
Confidence 999998765 378888777755 44566777753 33442332 223466778877776 444477888888
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
.+.-||+.++ +.+|-..-+..|+++=.|=+| ++. .+.....++.++.+...-|-++.+.-.+|-+.... +..
T Consensus 223 vqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe--kh~ 295 (465)
T KOG3846|consen 223 VQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE--KHT 295 (465)
T ss_pred ceeecccccc---hhhhhhcccCCCcEechhhhhhhcC--CceEEeecCCceEEEeeecccccCCCccceeeeeh--hhh
Confidence 8999999999 888886666778998889877 543 22333345566777777787743222344433332 111
Q ss_pred HHHHHHhh------------------------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccC
Q 015890 252 ATQLLKVQ------------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 252 ~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
.+...++. ...-.+++.....++...|+.-. -.+++.+++..-...++...++..
T Consensus 296 ~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~ 375 (465)
T KOG3846|consen 296 KESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKAS 375 (465)
T ss_pred cchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHh
Confidence 11111111 11123445555566666665411 123333333333333333333321
Q ss_pred CC-----------CccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHH
Q 015890 307 GE-----------GAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDD 369 (398)
Q Consensus 307 ~~-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~ 369 (398)
.+ +.++.|. .|--+.+.+.. ....+..+| .++|+.+-- ..++.||+.... .+-.|
T Consensus 376 ~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~f~D 447 (465)
T KOG3846|consen 376 KGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNTFSD 447 (465)
T ss_pred cccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHH-HHcCeeccc----cCCCceEeecchhhccHHH
Confidence 11 1122221 12222223321 234666666 588997643 257899999665 57789
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 370 CKAAADRLRRGLEEL 384 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~ 384 (398)
+-.++..|.+++..+
T Consensus 448 vy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 448 VYIFVNALNEAMDKL 462 (465)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999988887654
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=1.4e-06 Score=76.46 Aligned_cols=214 Identities=13% Similarity=0.052 Sum_probs=122.4
Q ss_pred hHHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCC
Q 015890 152 ADWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGD 220 (398)
Q Consensus 152 ~e~l~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~ 220 (398)
++++|+.|. .+..++++++...+...|. ..+++.++.|.++|++||+.+|+||++ -+..|.-.. ....+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 566777765 2223677888877888887 478999999999999999999999999 333332211 11223
Q ss_pred cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREI 298 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~ 298 (398)
.+++ +|||-|- .| ||..-. +++- -..++...+|...+.-...+.+.++.. + +.+++....-......
T Consensus 335 pD~v--TFSKK~q-~g---Gffh~~----~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~g 403 (484)
T KOG1405|consen 335 PDVV--TFSKKFQ-TG---GFFHDE----EFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKG 403 (484)
T ss_pred ccce--ehhhhhh-cC---ccccCc----ccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 2333 7889884 44 543322 2211 012222234555555555555555531 2 2222222222333444
Q ss_pred HHHHhccCCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHH
Q 015890 299 IREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR 376 (398)
Q Consensus 299 l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~ 376 (398)
|.+.-++.|. +.-..+. |-|+.++++.+. -...++. .++.+|+-+-.+ +...||+..+. ..+-+.+-++++
T Consensus 404 L~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~-~Rdk~i~-~~~~nGv~~GGC----g~~siRfRPsLvf~~~Ha~i~l~~ 476 (484)
T KOG1405|consen 404 LLELQAKYPGKINNLRGR-GTFIAWDCPSGS-IRDKLIL-IARLNGVNLGGC----GDKSIRFRPSLVFRKHHADIFLDI 476 (484)
T ss_pred HHHHHHhCchhhhccccc-ceEEEEeCCChH-HHHHHHH-HHHHcCceeccc----ccceeeeccceeehhhhHHHHHHH
Confidence 4444445555 2223455 666777887643 2233444 556889877432 35567776665 466778888888
Q ss_pred HHHHHHH
Q 015890 377 LRRGLEE 383 (398)
Q Consensus 377 l~~~~~~ 383 (398)
+.+.++.
T Consensus 477 ~~k~l~~ 483 (484)
T KOG1405|consen 477 FDKILAG 483 (484)
T ss_pred HHHHhcc
Confidence 8877654
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.71 E-value=7.5e-06 Score=77.39 Aligned_cols=308 Identities=17% Similarity=0.151 Sum_probs=184.3
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChH-H----HHHHHHHHh-ccCCC----EEEEeCCCCcChh
Q 015890 61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN-Q----AFVNIVLTL-CDAGD----SVVMFAPYYFNSY 127 (398)
Q Consensus 61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t-~----a~~~~~~~l-~~~gd----~Vl~~~p~~~~~~ 127 (398)
++.|.|. +|..++...+.++|....|. +.+.+.+++. + ++. ++++. ..+|+ .-++|...|....
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~--D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNP 644 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF--DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNP 644 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeecc--cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCCh
Confidence 5556553 67788888888888877774 4566654332 2 233 33333 33342 3577888888888
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
..++..|.+++.+ ..+.+| .+|+.+|+++.+. ....+++.++-|+. .|+. .+.+++++++.++||.-+..|.+-
T Consensus 645 ASA~MagmkvvpV-~~~~~G-~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGAN 719 (1001)
T KOG2040|consen 645 ASAAMAGMKVVPV-GCDANG-NIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGAN 719 (1001)
T ss_pred hhHHhcCCEEEEe-eccCCC-CccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCC
Confidence 8899999999999 888776 6899999998873 33357788887764 4554 345999999999999999999887
Q ss_pred -eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHH--h------hc--------cCCCC
Q 015890 207 -FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK--V------QD--------NIPIC 265 (398)
Q Consensus 207 -~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~--~------~~--------~~~~~ 265 (398)
-..-|.-...+ .+.+++=-.++|.|+. +|..+|-+.+. +.++..+.. . .. ..+++
T Consensus 720 MNAqVGlc~pGd-~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK---~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~G 795 (1001)
T KOG2040|consen 720 MNAQVGLCRPGD-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWG 795 (1001)
T ss_pred ccceecccCCcc-ccccceeecccceeeecCCCCCCCCCccchh---hhccccCCCCCccCCCCCCCCCCccceeccCCC
Confidence 22222211111 2233444577888854 33445555544 233222210 0 00 11111
Q ss_pred c--chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE---EEEeeCCC----CCCChHHHHH
Q 015890 266 A--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI---YLWARLPE----KHLDDFEVVR 336 (398)
Q Consensus 266 ~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~ 336 (398)
. =.+.-++..+++.. ..+.+..+...-+++++...|+..-.+.+.... +. =+.+++++ ...+..++++
T Consensus 796 sa~ILpISwaYikmMG~--~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~-~~vaHEFIlD~r~fK~~agieavDvAK 872 (1001)
T KOG2040|consen 796 SALILPISWAYIKMMGS--GGLKDASKIAILNANYMAKRLESHYKILFRGEN-GLVAHEFILDLRPFKKTAGIEAVDVAK 872 (1001)
T ss_pred cceeehhHHHHHHHhcc--cccchhhHHHhhhhHHHHHHHhhccceeEecCC-cceeeeeeeechhhccccCCcHHHHHH
Confidence 1 12333444455542 334444445556788888888875442333322 32 23444432 2257888999
Q ss_pred HHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 337 WLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 337 ~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+|. ++|..-...++. -++.+=|-..- .+.+|++++++++-..-+++.
T Consensus 873 RL~-DYgFHaPTmswP-V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 873 RLM-DYGFHAPTMSWP-VAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred HHH-hccCCCCccccc-cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 886 899877544433 45556555544 456678888888766555543
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.04 E-value=0.0025 Score=60.93 Aligned_cols=312 Identities=14% Similarity=0.120 Sum_probs=164.8
Q ss_pred ccCCCCCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-cc
Q 015890 38 GVVYWQPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CD 111 (398)
Q Consensus 38 g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~ 111 (398)
|--...+|+.++.-+.+. ..|..+|.|- +|..|-.--....+....|++-.|--+-.-+|+|-++...+. ..
T Consensus 126 GYyn~~vP~~I~RNilen--p~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~ 203 (1001)
T KOG2040|consen 126 GYYNTHVPAVILRNILEN--PGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN 203 (1001)
T ss_pred ccccccCcHHHHHHhhhC--CcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc
Confidence 333445677777665442 2445566553 333222222233344556777555555555556666555554 35
Q ss_pred CCCEEEEeCCCCcChhhHHHhc----CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
++.+.++...+|+.....++.. |+++... | +++.-...+.+..+++..|.. -|.+.+ ..
T Consensus 204 krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~---~~~~~~s~~~v~gvlvQYP~t-~G~i~d---~~ 266 (1001)
T KOG2040|consen 204 KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------D---IKEADYSSKDVSGVLVQYPDT-EGSVLD---FD 266 (1001)
T ss_pred ccceEEecCCCCcchhhhhhccccccceeEEec----------C---HHHhhccccceeEEEEEcCCC-CCcccC---HH
Confidence 5678999999998877665432 2332221 2 222222222267888887765 578888 88
Q ss_pred HHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccc---cCCCcceeEEEEccC------------------
Q 015890 188 RISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKA---YGMMGWRVGYIAYPS------------------ 246 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~---~~~~G~r~G~i~~~~------------------ 246 (398)
++++.++++|.++++-.--+...-.. ++...+.+|.++|...+ +|.+|.-.|++.+.+
T Consensus 267 el~~~a~~~~s~vv~atDLLaLtiLr-pPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~ 345 (1001)
T KOG2040|consen 267 ELVELAHANGSLVVMATDLLALTILR-PPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDAL 345 (1001)
T ss_pred HHHHHhhccCceEEEeehhhHHHccC-ChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeeccc
Confidence 88999999988876542122221111 11123445777774331 222233333332221
Q ss_pred CcHHHHHH-------HHHhhccCCCCcchHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 247 EVEGFATQ-------LLKVQDNIPICASIISQHLALYSLQ--TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 247 ~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
+.+.+.-. +++.+.....|......+-+.++.. .+.+.+++..+++......|.+.|+..+. ++..- .
T Consensus 346 gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~agh-el~~k--~ 422 (1001)
T KOG2040|consen 346 GKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGH-ELQHK--P 422 (1001)
T ss_pred ccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcch-hhccc--c
Confidence 00111111 1111111112221111111112221 24566788888888888899999987774 44322 3
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
+|=.+.+.-+. +.+++..+.+ +++|-++-- ..+.|-+++.- .+++|++.++..+.
T Consensus 423 fFDTLkI~~~~-s~~~~l~rA~-~~~iNlr~~----ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 423 FFDTLKIRCGC-SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ccceEEEEecC-cHHHHHHHHH-hhcCceEEe----ecCceEEeecccccHHHHHHHHHHHc
Confidence 55455554332 5677777765 666755542 46788888877 67778888877775
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.70 E-value=0.0024 Score=54.91 Aligned_cols=329 Identities=13% Similarity=0.104 Sum_probs=174.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQ 100 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~ 100 (398)
.+..++|+-| |...|.+|+..+.+-+-+-...+- +.+.....+.+.-...+.+++.++. +-+++..|+|.
T Consensus 5 ~~~vvnFaaG--PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 5 PERVVNFAAG--PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred ccceeecCCC--cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 3567888877 555566666666555543110000 0223334444444445555567653 23555677777
Q ss_pred HHHHHHHHhc--cCCCEE-EEeCCCCcC-hhhHHHhcCcE-EEEeccCCCCC--CCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 101 AFVNIVLTLC--DAGDSV-VMFAPYYFN-SYMSFQMTGVT-HILVGPCSSKT--LHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 101 a~~~~~~~l~--~~gd~V-l~~~p~~~~-~~~~~~~~g~~-~~~~~~~~~~~--~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
-..++...|+ +.|+.. .+...+|.. ...-++.+|.. .+.. +..+.. -.+|.+.++.. ++.+.|+.|.-
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~-~~k~y~ygkvPd~~~w~~~----~da~yvyyCaN 157 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIP-KLKSYTYGKVPDPSTWELN----PDASYVYYCAN 157 (370)
T ss_pred cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEec-cccccccCcCCChhhcccC----CCccEEEEecC
Confidence 7777777776 455311 111223311 22234556643 3333 444333 34565554432 22467888865
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
..-.|+-++. +. +-.-+|..+|.|-.. |.. .+...... .++.....|.+|++|+ -.++.+ ++++
T Consensus 158 ETVHGVEf~~--~P----~~~~~~~vlVaDmSSnflS--rpvDvsk~--gvi~aGAQKN~G~aG~--Tvvivr---~dll 222 (370)
T KOG2790|consen 158 ETVHGVEFDF--IP----VNDPKGAVLVADMSSNFLS--RPVDVSKF--GVIFAGAQKNVGPAGV--TVVIVR---KDLL 222 (370)
T ss_pred ceeeceecCC--CC----CCCCCCceEEEecccchhc--CCccchhc--ceEEeccccccCcccc--EEEEEe---hhhh
Confidence 5666776541 11 112468899999666 443 23333333 3667788999998874 556666 4555
Q ss_pred HHHHHhh------------ccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc--cC--
Q 015890 253 TQLLKVQ------------DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK--GG-- 314 (398)
Q Consensus 253 ~~l~~~~------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~-- 314 (398)
......- .....++|.+.+...-..++. ....+..+.+.-.+....+++.+.+..++-.. .+
T Consensus 223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~ 302 (370)
T KOG2790|consen 223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSV 302 (370)
T ss_pred cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhh
Confidence 4432211 111224444444444443332 12345666666777788899999875331111 11
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
..-+-+.+++.+.. -..++..... +++..-.-| ..+-+.||-|+-. .+-++.+++++.++++.+.
T Consensus 303 RS~MNV~Fri~~d~-Le~eFLkeA~-~~~mv~LKG--hRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 303 RSRMNVPFRIEKDE-LEAEFLKEAA-KEHMVQLKG--HRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhcccceeecchH-HHHHHHHHHH-Hhhhhcccc--ccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 11344555665321 2345555554 344433233 3456889999776 8889999988888876653
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.66 E-value=0.00042 Score=58.84 Aligned_cols=280 Identities=17% Similarity=0.181 Sum_probs=140.6
Q ss_pred HHHHHHHHhc--cCCCE-EEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeE-EEEeCCCC
Q 015890 101 AFVNIVLTLC--DAGDS-VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKL-VSVVNPGN 175 (398)
Q Consensus 101 a~~~~~~~l~--~~gd~-Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~-v~i~~p~n 175 (398)
++.+.+.++. +|..+ |+-+.-.-.+.....-..|++++.+.+.-+ +...-|++.+++.+++.. ... +++.+-.+
T Consensus 88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-~dcilci~stts 166 (432)
T KOG3843|consen 88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-EDCILCIHSTTS 166 (432)
T ss_pred cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-CceEEEEeeccc
Confidence 3444455554 34433 333444444455556678888887744432 223448899999998654 353 34332221
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
.. .--+++.+++|+.+|..|+++-|+..+| +-....-. ...-+-.+.++.|+.|.|-.|= .|.++..-+ ..
T Consensus 167 cf-apr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk-~n 242 (432)
T KOG3843|consen 167 CF-APRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFK-DN 242 (432)
T ss_pred cc-CCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhH-HH
Confidence 11 1234567999999999999999999999 32211000 0111122356789999995432 144443211 45
Q ss_pred HHHHHHHhhccCCCCcchHHHHHHHHHhcCCc----hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC--
Q 015890 251 FATQLLKVQDNIPICASIISQHLALYSLQTGP----EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL-- 324 (398)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-- 324 (398)
.+..+.+...+.....++... +...|..+. +.+.++.+...+.++.+....+.++.-.+..|++.......+
T Consensus 243 ~iq~iak~ypgrasa~ps~dl--litll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~t 320 (432)
T KOG3843|consen 243 FIQEIAKMYPGRASASPSLDL--LITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKT 320 (432)
T ss_pred HHHHHHHhCCCccccCccHHH--HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhcc
Confidence 666665554433333333333 333333333 223444455555555555544444432223333222222222
Q ss_pred -CCCCCChHHHHHHHHHhcCe---EEecCCCCC--CC----------------CeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 325 -PEKHLDDFEVVRWLAHRHGV---VVIPGGACG--CR----------------GHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 325 -~~~~~~~~~~~~~ll~~~gi---~v~~g~~~~--~~----------------~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
++....+..++--++-.+|| .|.|.+... -+ +++-+.... .+..|++.+..+|...+
T Consensus 321 i~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~ 400 (432)
T KOG3843|consen 321 IDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCL 400 (432)
T ss_pred CChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHH
Confidence 22111122222222234444 344443321 01 233333222 56788999999998888
Q ss_pred HHHhcc
Q 015890 382 EELVKD 387 (398)
Q Consensus 382 ~~~~~~ 387 (398)
.++.++
T Consensus 401 a~~~ke 406 (432)
T KOG3843|consen 401 AAFRKE 406 (432)
T ss_pred HHHHHH
Confidence 777654
No 396
>PLN02672 methionine S-methyltransferase
Probab=97.19 E-value=0.024 Score=59.32 Aligned_cols=226 Identities=10% Similarity=0.081 Sum_probs=138.2
Q ss_pred HHHHHHHHHcC----CCeEEcCCccCCCCCc-HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCc
Q 015890 19 MVQIQELVRGA----KNAVSLAQGVVYWQPP-KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS 91 (398)
Q Consensus 19 ~~~~~~~~~~g----~~~~~l~~g~~~~~~~-~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~ 91 (398)
...+++...+| ++.+||+.-+...... -..+..+...+.+.....|.+..|...+|+-++.|++..+++ .+++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (1082)
T PLN02672 372 VKTIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDN 451 (1082)
T ss_pred HHHHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccc
Confidence 44455555555 5567777654333210 123455666677766788888999999999999999998875 5899
Q ss_pred EEEecChHHHHHHHHHHh------ccCCCEEEEeCCCCcChhhHHHhcC--------cEEEEeccCCCCCCCCChHHHHH
Q 015890 92 VMVTAGANQAFVNIVLTL------CDAGDSVVMFAPYYFNSYMSFQMTG--------VTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l------~~~gd~Vl~~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
|++.++-..|++.+++.+ ++.+.+-.++. -|...+...| ..+..+ +.+. + .+.+.+
T Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~--~~~~~~ 521 (1082)
T PLN02672 452 VVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK----KWLTSLAIENATSDSKSDDVITVI-EAPR---Q--SDLVIE 521 (1082)
T ss_pred eEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH----HHHhHhhhhcccccCccCCeEEEE-eCCC---c--chHHHH
Confidence 999999999998877764 33332332221 2333333333 222222 2111 1 234556
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccc-------cCCcEEEEcc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCV-------EGDHVVNLFS 227 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~-------~~~~~i~~~s 227 (398)
.++.-+ +++|+..-.... ..+-..++.|.+.+++.|.+++.|..- |..++.+. ... .+.+..++..
T Consensus 522 ~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1082)
T PLN02672 522 LIKKLK-PQVVVTGMADFE---MRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICG 597 (1082)
T ss_pred HHHhCC-CeEEEEeccchh---hhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhh
Confidence 666443 688876533322 233445899999999999999999766 44332211 111 1345566667
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~ 260 (398)
+-|.-=.+.+.+.+++.-+ ..+.+.+.+...
T Consensus 598 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 628 (1082)
T PLN02672 598 LVKNQVYSDLEVAFVISEN--EAVLKALSKTGE 628 (1082)
T ss_pred hhhccccccceEEEEecCc--HHHHHHHHHHHH
Confidence 7665545899999988775 556666654433
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=86.97 E-value=8.6 Score=32.58 Aligned_cols=100 Identities=17% Similarity=0.250 Sum_probs=66.0
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEE---E--EeCCC--C-------cChhhHHHhcCcEEEEeccCCCCCCCCChHHHH
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSV---V--MFAPY--Y-------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~V---l--~~~p~--~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 156 (398)
-+.+.+||-.++.++..++. .|..| + .|... | .-....++..|..++.. ..... ..-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~-~~~g~-~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTF-DTSGE-EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEE-ecCcc-chhhHHHHH
Confidence 36788999999887777663 34322 1 22222 1 11234668888887777 44321 123577888
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
+.++.-. ..+|+ +|.+.+..+..++-.+|++.|+..+
T Consensus 80 ~~l~~l~-~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLK-VDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCc-ccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 8887543 44555 7899999999999999999998743
No 398
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=86.77 E-value=21 Score=31.35 Aligned_cols=158 Identities=12% Similarity=0.059 Sum_probs=82.9
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEec---C
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA---G 97 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~---g 97 (398)
+.-+.++|.+++.|+.... |...=|.+..+-.+++.++ + .. ...-+.+.++-+. +.+..-++++- -
T Consensus 37 i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g----~-t~---~~~lel~~~~r~~--~~~~Pivlm~Y~Npi 106 (265)
T COG0159 37 IKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAG----V-TL---EDTLELVEEIRAK--GVKVPIVLMTYYNPI 106 (265)
T ss_pred HHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCC----C-CH---HHHHHHHHHHHhc--CCCCCEEEEEeccHH
Confidence 3334667788888887653 3333466666666666542 2 11 2222223222111 22222344442 1
Q ss_pred hHHHHHHHHHHhccCC-CEEEEeCCCC---cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 98 ANQAFVNIVLTLCDAG-DSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 98 ~t~a~~~~~~~l~~~g-d~Vl~~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
-.-++...++-+.+.| |.+++++--+ ..+...++.+|+.++++ -.+ . -+.+.+++..+... ..++..+-
T Consensus 107 ~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~l-vaP-t---t~~~rl~~i~~~a~--GFiY~vs~ 179 (265)
T COG0159 107 FNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFL-VAP-T---TPDERLKKIAEAAS--GFIYYVSR 179 (265)
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEE-eCC-C---CCHHHHHHHHHhCC--CcEEEEec
Confidence 2234444444444555 7888876554 23556777788877776 221 1 14456666666543 55666666
Q ss_pred CCCCccCCC-HHHHHHHHHHHHHc
Q 015890 174 GNPSGTYIP-ERLLKRISDLCKAA 196 (398)
Q Consensus 174 ~nptG~~~~-~~~l~~i~~l~~~~ 196 (398)
+.-||.-.+ ...+.++++..+++
T Consensus 180 ~GvTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 180 MGVTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred ccccCCCcccchhHHHHHHHHHHh
Confidence 667787554 22356666666654
No 399
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.27 E-value=7 Score=35.48 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=69.1
Q ss_pred HHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh
Q 015890 75 DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA 152 (398)
Q Consensus 75 ~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 152 (398)
...+++...++.++.. .|+..... .+..+.....+.+ += ..-.|.+|.+.++.-.++++++ +.+.- . -.
T Consensus 16 ~ia~~f~~al~~~p~s~~~Ivava~~--s~~~A~~fAq~~~--~~-~~k~y~syEeLakd~~vDvVyi-~~~~~-q--H~ 86 (351)
T KOG2741|consen 16 RIARDFVRALHTLPESNHQIVAVADP--SLERAKEFAQRHN--IP-NPKAYGSYEELAKDPEVDVVYI-STPNP-Q--HY 86 (351)
T ss_pred HHHHHHHHHhccCcccCcEEEEEecc--cHHHHHHHHHhcC--CC-CCccccCHHHHhcCCCcCEEEe-CCCCc-c--HH
Confidence 3444555555555533 33333322 4555544443322 11 3456788999999999999998 54321 1 24
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.+--++..+ |.|++.-| ..++.++.++|.+.|+++| .++.|..+
T Consensus 87 evv~l~l~~~---K~VL~EKP-----la~n~~e~~~iveaA~~rg-v~~meg~~ 131 (351)
T KOG2741|consen 87 EVVMLALNKG---KHVLCEKP-----LAMNVAEAEEIVEAAEARG-VFFMEGLW 131 (351)
T ss_pred HHHHHHHHcC---CcEEeccc-----ccCCHHHHHHHHHHHHHcC-cEEEeeee
Confidence 5555555544 55777654 4567889999999999988 66667666
No 400
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=83.45 E-value=16 Score=31.41 Aligned_cols=94 Identities=26% Similarity=0.177 Sum_probs=53.9
Q ss_pred ecChHHHHHHHHHHhccCCCEEE-EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVV-MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
+..|..+ ..++..|..++-+|. +..+.-......++..|++++.. +.+ |.+.|.++++.- ..|++..+
T Consensus 5 GatG~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~-d~~------~~~~l~~al~g~---d~v~~~~~ 73 (233)
T PF05368_consen 5 GATGNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEA-DYD------DPESLVAALKGV---DAVFSVTP 73 (233)
T ss_dssp TTTSHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES--TT-------HHHHHHHHTTC---SEEEEESS
T ss_pred CCccHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeec-ccC------CHHHHHHHHcCC---ceEEeecC
Confidence 3334444 345555555665444 44544223445567789988755 322 789999999854 45555544
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
... ....+.-..+++.|++.|+..++
T Consensus 74 ~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 74 PSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred cch---hhhhhhhhhHHHhhhccccceEE
Confidence 322 22344578889999988865554
No 401
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=82.15 E-value=35 Score=30.05 Aligned_cols=164 Identities=14% Similarity=0.131 Sum_probs=88.7
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe-cCh-
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT-AGA- 98 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~-~g~- 98 (398)
++.+.++|-+++.++.... |...=|.+.++..+++.++. .. ..+.+.+.+.-+...+++.. +++ .+-
T Consensus 30 ~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~-----~~---~~~~~~v~~ir~~~~~~plv--~m~Y~Npi 99 (256)
T TIGR00262 30 IKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGM-----TP---EKCFELLKKVRQKHPNIPIG--LLTYYNLI 99 (256)
T ss_pred HHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCC-----CH---HHHHHHHHHHHhcCCCCCEE--EEEeccHH
Confidence 5556788999999998764 33345777778777776531 11 23333333321111233222 222 221
Q ss_pred -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
.-++...+..+.+.| |.|++++-.+. .+...++..|+..+.+ -.+ . -+.+.++...+... ..|++.+-
T Consensus 100 ~~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~l-v~P-~---T~~eri~~i~~~~~--gfiy~vs~ 172 (256)
T TIGR00262 100 FRKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFL-VAP-N---ADDERLKQIAEKSQ--GFVYLVSR 172 (256)
T ss_pred hhhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEE-ECC-C---CCHHHHHHHHHhCC--CCEEEEEC
Confidence 224455555666656 77888765542 2445667888886654 122 1 14567777766543 45555544
Q ss_pred CCCCccC--CCHHHHHHHHHHHHH-cCCEEEEe
Q 015890 174 GNPSGTY--IPERLLKRISDLCKA-AGSWLVVD 203 (398)
Q Consensus 174 ~nptG~~--~~~~~l~~i~~l~~~-~~~~livD 203 (398)
+.-||.- ++.+ +.+.++.+++ .+..+++|
T Consensus 173 ~G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~vg 204 (256)
T TIGR00262 173 AGVTGARNRAASA-LNELVKRLKAYSAKPVLVG 204 (256)
T ss_pred CCCCCCcccCChh-HHHHHHHHHhhcCCCEEEe
Confidence 5678874 4444 4444444443 35666665
No 402
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=79.64 E-value=25 Score=31.75 Aligned_cols=57 Identities=18% Similarity=0.259 Sum_probs=37.8
Q ss_pred CCCCChHHHHHhhc---c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 147 TLHPDADWLEKTLE---T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 147 ~~~~d~e~l~~~l~---~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
|..++.++++..++ . -.....|+++ .+=|-|. +.+...+|+++|++.|..+++|..-
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g~--~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPGV--PPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCCC--CHHHHHHHHHHHHhcCCeEEEECCh
Confidence 45566666666544 2 2213455554 4555554 5778999999999999999999543
No 403
>PLN02591 tryptophan synthase
Probab=79.51 E-value=42 Score=29.38 Aligned_cols=166 Identities=11% Similarity=0.074 Sum_probs=98.7
Q ss_pred HHHHHHHHHcCCCeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecC
Q 015890 19 MVQIQELVRGAKNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG 97 (398)
Q Consensus 19 ~~~~~~~~~~g~~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g 97 (398)
++-+..+.++|-+++.++....+ ...=|.+.++-.+++.++. . ...+.+.+.+. .+...+ .-++++--
T Consensus 19 ~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~-----~---~~~~~~~~~~~-r~~~~~--p~ilm~Y~ 87 (250)
T PLN02591 19 AEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGT-----T---LDSVISMLKEV-APQLSC--PIVLFTYY 87 (250)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCC-----C---HHHHHHHHHHH-hcCCCC--CEEEEecc
Confidence 33355567889999999987643 3345777778777776531 1 13333444332 221122 22455432
Q ss_pred h---HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEE
Q 015890 98 A---NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 98 ~---t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
. .-+++..+..+.+.| |.|++++-.+. .+...++..|+..+.+ -.+ . .+.+.++......+ ..|++
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~l-v~P-t---t~~~ri~~ia~~~~--gFIY~ 160 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLL-TTP-T---TPTERMKAIAEASE--GFVYL 160 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEE-eCC-C---CCHHHHHHHHHhCC--CcEEE
Confidence 2 225556666666667 88999987662 3556778899988877 222 1 24456666666544 67777
Q ss_pred eCCCCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015890 171 VNPGNPSGTYIP-ERLLKRISDLCKAA-GSWLVV 202 (398)
Q Consensus 171 ~~p~nptG~~~~-~~~l~~i~~l~~~~-~~~liv 202 (398)
.+-...||.-.. ++.++++++.++++ ++++++
T Consensus 161 Vs~~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 161 VSSTGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred eeCCCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 665667886422 45678877777764 555444
No 404
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=78.71 E-value=48 Score=29.58 Aligned_cols=134 Identities=14% Similarity=0.193 Sum_probs=77.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhc----C------------CCCCcEEEecChHHHHHHHHHHhccCCC--EEEEeC--
Q 015890 61 ISKYGADEGLPELRDALVKKLNQEN----K------------LYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFA-- 120 (398)
Q Consensus 61 ~~~y~~~~~~~~~~~~l~~~l~~~~----~------------~~~~~v~~~~g~t~a~~~~~~~l~~~gd--~Vl~~~-- 120 (398)
...|....+...+|+.+.+-++.+. + +-..+|++|.|.+..+...+....++|. +|+|.+
T Consensus 118 ~~~~~S~~~~~~lr~~~i~~I~eli~Eie~~~E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~ 197 (353)
T KOG1465|consen 118 TNKKLSSADAKKLRKDLIEGIKELITEIEGSRENIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGA 197 (353)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhccCceEEecCccHHHHHHHHHHHhccCceEEEEeecC
Confidence 3444444445556666555544431 1 1256899999999999888888877764 466653
Q ss_pred CCCcChhhH--HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015890 121 PYYFNSYMS--FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 121 p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
|.+.++..+ +...|++...+ + |.+-+.-+-+-+ |+|+-.+.--+-|.+..+--...++..|++|-+
T Consensus 198 p~~qgH~~Ak~la~~giettVI-~--------daaVfA~MsrVn---KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~v 265 (353)
T KOG1465|consen 198 PNNQGHELAKPLAQAGIETTVI-P--------DAAVFAMMSRVN---KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSV 265 (353)
T ss_pred CcccchHhhHHHHHcCCeeEEe-c--------cHHHHHHhhhcc---eEEEEeeeEecCCCeeccchHHHHHHHHHhcCC
Confidence 444443322 23456776555 1 333333332222 566655544344445444456778888899999
Q ss_pred EEEEeece
Q 015890 199 WLVVDNTY 206 (398)
Q Consensus 199 ~livDe~~ 206 (398)
++++=.-.
T Consensus 266 Pv~VlAp~ 273 (353)
T KOG1465|consen 266 PVIVLAPM 273 (353)
T ss_pred cEEEecch
Confidence 88876433
No 405
>smart00642 Aamy Alpha-amylase domain.
Probab=78.50 E-value=7.4 Score=31.66 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.+|+|-+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECC
Confidence 5688999999999999999999665
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=78.22 E-value=14 Score=31.36 Aligned_cols=87 Identities=17% Similarity=0.296 Sum_probs=54.4
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEccc
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSF 228 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~ 228 (398)
++.++++++.+- .++-+-.-+..+-.. .+..+++.++|++|++.+|+++-. +. ........ +....-+...
T Consensus 24 ~~~ve~al~~Gv--~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHl--Gq~D~~~~~a 97 (211)
T COG0352 24 LEWVEAALKGGV--TAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHL--GQDDMPLAEA 97 (211)
T ss_pred HHHHHHHHhCCC--eEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEc--CCcccchHHH
Confidence 788999998763 666666444333222 456789999999999999998755 21 11111111 1122334445
Q ss_pred ccccCCCcceeEEEEcc
Q 015890 229 SKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~ 245 (398)
.|.++ ++..+|+=+.+
T Consensus 98 r~~~~-~~~iIG~S~h~ 113 (211)
T COG0352 98 RELLG-PGLIIGLSTHD 113 (211)
T ss_pred HHhcC-CCCEEEeecCC
Confidence 67775 88888886665
No 407
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=77.97 E-value=30 Score=32.74 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhhhcC-CCCCcEEEecChHHHHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCC
Q 015890 72 ELRDALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149 (398)
Q Consensus 72 ~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 149 (398)
.+-....+..++.++ ....++++..-| +....+...|...| ..|.+.+-++......++.+|.+++.
T Consensus 160 Si~saAv~lA~~~~~~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~---------- 228 (414)
T COG0373 160 SISSAAVELAKRIFGSLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA---------- 228 (414)
T ss_pred chHHHHHHHHHHHhcccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----------
Confidence 333444444444455 455555554434 67778888888887 89999999998888888888865543
Q ss_pred CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
++++.+.+.+. ++|+..+ +.|+ .+.+.+.+++..+. +.+ ++++|
T Consensus 229 --l~el~~~l~~~---DvVissT-sa~~-~ii~~~~ve~a~~~--r~~-~livD 272 (414)
T COG0373 229 --LEELLEALAEA---DVVISST-SAPH-PIITREMVERALKI--RKR-LLIVD 272 (414)
T ss_pred --HHHHHHhhhhC---CEEEEec-CCCc-cccCHHHHHHHHhc--ccC-eEEEE
Confidence 34566666643 4555442 2222 44665555555442 223 89999
No 408
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=73.71 E-value=54 Score=27.70 Aligned_cols=97 Identities=24% Similarity=0.261 Sum_probs=54.2
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK 166 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~ 166 (398)
+....|++..||..|...+ ..|++.|-.|.+.+|....-...+...| ++..+ .-. + +.+.+ . . ..
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~-~~~---~--~~~dl----~--~-~~ 71 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWL-ARC---F--DADIL----E--G-AF 71 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEE-eCC---C--CHHHh----C--C-cE
Confidence 3455788888887776655 5666677788887777654333333333 44444 211 1 22222 1 1 34
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE-Eeece
Q 015890 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV-VDNTY 206 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li-vDe~~ 206 (398)
+|++. ++++ +-=..+.+.|++.++++- +|+.-
T Consensus 72 lVi~a-t~d~-------~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 72 LVIAA-TDDE-------ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred EEEEC-CCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 55543 3332 224688999999998773 56433
No 409
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=71.18 E-value=11 Score=34.68 Aligned_cols=70 Identities=11% Similarity=0.065 Sum_probs=45.9
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...++++..++..|..+|.+..+...++-.... . .....+.|..++.+++++|++.|+++|+-||-.
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga--~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPE 94 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGG--S----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVPE 94 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCccccccccc--c----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 445566777777756676777665544433322111 0 012245567899999999999999999998854
No 410
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=68.87 E-value=82 Score=27.76 Aligned_cols=161 Identities=9% Similarity=0.046 Sum_probs=92.4
Q ss_pred HHHHHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecC
Q 015890 19 MVQIQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG 97 (398)
Q Consensus 19 ~~~~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g 97 (398)
.+-+..+.+.|-+++.++.... |...=|.+.++..+++.++. . ...+.+.+.+.-.+ ..+..-++++--
T Consensus 27 ~~~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G~-----~---~~~~~~~~~~ir~~--~~~~pivlm~Y~ 96 (259)
T PF00290_consen 27 LEILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNGF-----T---LEKIFELVKEIRKK--EPDIPIVLMTYY 96 (259)
T ss_dssp HHHHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT----------HHHHHHHHHHHHHH--CTSSEEEEEE-H
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC-----C---HHHHHHHHHHHhcc--CCCCCEEEEeec
Confidence 3344555567999999998653 33445778888888876631 1 13344444333212 122333555532
Q ss_pred hH---HHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEE
Q 015890 98 AN---QAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 98 ~t---~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
.. -+++..+..+.+.| |.+++|+--+. .+...++..|+..+.+ -.+ . -+.+.+++..+..+ ..|++
T Consensus 97 N~i~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~l-v~p-~---t~~~Ri~~i~~~a~--gFiY~ 169 (259)
T PF00290_consen 97 NPIFQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPL-VAP-T---TPEERIKKIAKQAS--GFIYL 169 (259)
T ss_dssp HHHHHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEE-EET-T---S-HHHHHHHHHH-S--SEEEE
T ss_pred cHHhccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEE-ECC-C---CCHHHHHHHHHhCC--cEEEe
Confidence 21 23344444444455 78999886653 3556678889988876 222 1 15667777776554 78888
Q ss_pred eCCCCCCccCCC-HHHHHHHHHHHHHc
Q 015890 171 VNPGNPSGTYIP-ERLLKRISDLCKAA 196 (398)
Q Consensus 171 ~~p~nptG~~~~-~~~l~~i~~l~~~~ 196 (398)
.+-...||.-.+ .+.+.+.++.++++
T Consensus 170 vs~~GvTG~~~~~~~~l~~~i~~ik~~ 196 (259)
T PF00290_consen 170 VSRMGVTGSRTELPDELKEFIKRIKKH 196 (259)
T ss_dssp ESSSSSSSTTSSCHHHHHHHHHHHHHT
T ss_pred eccCCCCCCcccchHHHHHHHHHHHhh
Confidence 777778888543 45688888887776
No 411
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=66.66 E-value=93 Score=27.53 Aligned_cols=164 Identities=13% Similarity=0.149 Sum_probs=95.7
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecCh--
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGA-- 98 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~-- 98 (398)
+..+.+.|-+++.++.... |...=|.+.++..+++.++. . ...+.+.+.+. ++...+ .-++++--.
T Consensus 35 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~-----~---~~~~~~~~~~~-r~~~~~--p~vlm~Y~N~i 103 (263)
T CHL00200 35 LKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGI-----N---LNKILSILSEV-NGEIKA--PIVIFTYYNPV 103 (263)
T ss_pred HHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCC-----C---HHHHHHHHHHH-hcCCCC--CEEEEecccHH
Confidence 5556678899999998654 33345777777777775531 1 12333333332 221122 224555322
Q ss_pred -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
.-+++..+..+.+.| |.|++++-.+. .+...++..|+..+.+ -.+ .. +.+.++...+... ..|++.+-
T Consensus 104 ~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~l-v~P-tT---~~eri~~i~~~a~--gFIY~vS~ 176 (263)
T CHL00200 104 LHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILL-IAP-TS---SKSRIQKIARAAP--GCIYLVST 176 (263)
T ss_pred HHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEE-ECC-CC---CHHHHHHHHHhCC--CcEEEEcC
Confidence 124455555565666 88998876553 3556778889887776 222 21 4567777776543 56776656
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHc-CCEEEEe
Q 015890 174 GNPSGTYI-PERLLKRISDLCKAA-GSWLVVD 203 (398)
Q Consensus 174 ~nptG~~~-~~~~l~~i~~l~~~~-~~~livD 203 (398)
...||.-. -.+.++++.+..+++ +.++.++
T Consensus 177 ~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 177 TGVTGLKTELDKKLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred CCCCCCCccccHHHHHHHHHHHHhcCCCEEEE
Confidence 66788742 234577777777754 6666665
No 412
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=65.32 E-value=89 Score=26.84 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=62.3
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEE----EeCCC----CcC-----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVV----MFAPY----YFN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl----~~~p~----~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
++..+||-.++.++..+..+ -+.+. ++... |+. ...+++..|+..+.+ +.+.. ..-..+.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~-~~~~~-~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKL-YTEGT-EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEe-ecCCC-ccHHHHHHHHH
Confidence 56779999999999888766 43222 12211 111 225678888877665 43211 11135667777
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (398)
+++-. +.+++ +|.+........+-.+|.+.|+..
T Consensus 81 l~~~g-v~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 81 LHTLD-VEAVV-------FGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHcC-CCEEE-------ECCcccHHHHHHHHHHHHhcCCEE
Confidence 76543 45665 688888888888888999988763
No 413
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=65.21 E-value=16 Score=33.10 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=44.7
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...++++..++-.|..+|.+..+..-++-+... . .++ .+.|-.++++++++|++.|+++|+-||-.
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~--~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGG--Q----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcc--c----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEEe
Confidence 445566777777645666677665544443332221 0 111 23455799999999999999999998854
No 414
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=65.05 E-value=53 Score=28.10 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=54.9
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEE-----EeCC----CCcC-----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVV-----MFAP----YYFN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl-----~~~p----~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
+++.+||-.+..++..++.+ - .|. ++.. .|++ ...+++..|+..+.+ +.+.+. .-..+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~-~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~-~~~g~~-~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-H-EVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEI-PTSGDE-EDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT---EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEE-EE---C-CCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-C-CccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEE-EccCcc-chhhHHHHH
Confidence 67789999999998887765 3 331 1111 1111 335678889887776 554111 113577778
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.++.-. +.+++ +|.+........+-++|.+.|+..+
T Consensus 80 ~l~~~~-v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 80 ALKELK-VEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHCTC---SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHcC-CCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 787543 45555 6888888888888889999887643
No 415
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=65.00 E-value=1.3e+02 Score=28.60 Aligned_cols=124 Identities=8% Similarity=0.136 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhhhcCCC------CCcEEEe----cChHHHHHHHHHHhccCCCEEEEeCC-CCc-ChhhHH----HhcC
Q 015890 71 PELRDALVKKLNQENKLY------KSSVMVT----AGANQAFVNIVLTLCDAGDSVVMFAP-YYF-NSYMSF----QMTG 134 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~------~~~v~~~----~g~t~a~~~~~~~l~~~gd~Vl~~~p-~~~-~~~~~~----~~~g 134 (398)
.++.+.+.+.+....+.. +..|.+. .|=|..+..+...+...|.+|.+... .|. +....+ +..|
T Consensus 217 ~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lg 296 (436)
T PRK11889 217 EEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIG 296 (436)
T ss_pred HHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcC
Confidence 445555555554433221 2233333 33344444444455566766654433 332 222222 3344
Q ss_pred cEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEeece
Q 015890 135 VTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA---AGSWLVVDNTY 206 (398)
Q Consensus 135 ~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~---~~~~livDe~~ 206 (398)
+.+... .+.+.+.+.+. ......+|+|..+.... -+.+.++++.++.+. +.++|++|.+.
T Consensus 297 ipv~v~---------~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~---kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 297 FEVIAV---------RDEAAMTRALTYFKEEARVDYILIDTAGKNY---RASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred CcEEec---------CCHHHHHHHHHHHHhccCCCEEEEeCccccC---cCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 443322 14556666554 11125788888653211 334456666666553 45677788654
No 416
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=64.68 E-value=29 Score=25.98 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=43.5
Q ss_pred CCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.|..+.+.+.....+.+.+ -++.. .-.+.+...++.+ +-|++.-|- ..+.+++++|.++++++|..+.
T Consensus 50 ~~~~~~~ll~~~~~D~V~I-~tp~~---~h~~~~~~~l~~g---~~v~~EKP~-----~~~~~~~~~l~~~a~~~~~~~~ 117 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVII-ATPPS---SHAEIAKKALEAG---KHVLVEKPL-----ALTLEEAEELVEAAKEKGVKVM 117 (120)
T ss_dssp EESSHHHHHHHTTESEEEE-ESSGG---GHHHHHHHHHHTT---SEEEEESSS-----SSSHHHHHHHHHHHHHHTSCEE
T ss_pred chhHHHHHHHhhcCCEEEE-ecCCc---chHHHHHHHHHcC---CEEEEEcCC-----cCCHHHHHHHHHHHHHhCCEEE
Confidence 3445556666556666666 33321 1345556666543 467777552 2367889999999999988876
Q ss_pred Ee
Q 015890 202 VD 203 (398)
Q Consensus 202 vD 203 (398)
+.
T Consensus 118 Vg 119 (120)
T PF01408_consen 118 VG 119 (120)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 417
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=64.39 E-value=1.1e+02 Score=27.57 Aligned_cols=105 Identities=13% Similarity=0.149 Sum_probs=64.0
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCC--EEEEe--CCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGD--SVVMF--APYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd--~Vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
..++++|.|-+.++..++....+.|. +|++. .|.+.+. ...++..|.++..+ + |. ..-..++.
T Consensus 119 dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I-~-Ds--------a~~~~~~~- 187 (301)
T COG1184 119 DGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVI-V-DS--------AVGAFMSR- 187 (301)
T ss_pred CCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEE-e-ch--------HHHHHHHh-
Confidence 56799999999999988888887775 66664 6676553 35677888887777 2 21 11222222
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe-ece
Q 015890 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD-NTY 206 (398)
Q Consensus 163 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livD-e~~ 206 (398)
+..|++. ..--.-|.+.++----.|+..|++.+.++++= |.|
T Consensus 188 --vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesy 231 (301)
T COG1184 188 --VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESY 231 (301)
T ss_pred --CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeee
Confidence 2333333 22222344444433456777888888887754 555
No 418
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=63.44 E-value=42 Score=28.19 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=14.9
Q ss_pred HHHHHHHHHHcCCEEEE
Q 015890 186 LKRISDLCKAAGSWLVV 202 (398)
Q Consensus 186 l~~i~~l~~~~~~~liv 202 (398)
+.++++.++++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 89999999999988765
No 419
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=63.15 E-value=11 Score=37.68 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=29.7
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG 211 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~ 211 (398)
||...-++++++++++.|++.|+-||+|=|| |+.++
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 3444457899999999999999999999999 66544
No 420
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=62.72 E-value=37 Score=22.70 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=36.3
Q ss_pred ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEe
Q 015890 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 125 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livD 203 (398)
.+...++..|.++..+ .. ..+.++. . ...+++.+|.. . ++ ++++++|.++.++=|.++|+|
T Consensus 9 a~~~~L~~~g~~v~~~-~~-------~~~~l~~----~--~~tll~i~~~~---~-~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERW-RK-------PYEALEA----D--DGTLLVIGPDL---R-LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHHCCCeeEEe-cc-------cHHHhCC----C--CCEEEEEeCCC---C-CCchHHHHHHHHHHHcCCEEEEeC
Confidence 4556677778887665 11 1333322 2 24445544442 2 34 578999999999777777764
No 421
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=62.52 E-value=45 Score=29.20 Aligned_cols=91 Identities=18% Similarity=0.098 Sum_probs=53.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCC-ChHHHHHhhccCCCCeEE
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLV 168 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~e~l~~~l~~~~~~~~v 168 (398)
..|++-.|++++-.++- .|.+.|..+++..-+-.+. ....+..+.. ..+ |.+.+++.++++. +++|
T Consensus 3 ~~IlvlgGT~egr~la~-~L~~~g~~v~~Svat~~g~---~~~~~~~v~~--------G~l~~~~~l~~~l~~~~-i~~V 69 (248)
T PRK08057 3 PRILLLGGTSEARALAR-ALAAAGVDIVLSLAGRTGG---PADLPGPVRV--------GGFGGAEGLAAYLREEG-IDLV 69 (248)
T ss_pred ceEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCCC---cccCCceEEE--------CCCCCHHHHHHHHHHCC-CCEE
Confidence 35888999999988654 4445576666654333222 2223333321 135 7888999988665 5665
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
+= .+.|.-...+ +.+.+.|++.|+.
T Consensus 70 ID--ATHPfA~~is----~~a~~ac~~~~ip 94 (248)
T PRK08057 70 ID--ATHPYAAQIS----ANAAAACRALGIP 94 (248)
T ss_pred EE--CCCccHHHHH----HHHHHHHHHhCCc
Confidence 53 3344433332 5566778888876
No 422
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=61.14 E-value=1.3e+02 Score=27.29 Aligned_cols=107 Identities=12% Similarity=0.052 Sum_probs=57.5
Q ss_pred CCcEEEecChH--------HHHHHHHHHhccCC--CEEEEe--CCCCcC-h--hhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 89 KSSVMVTAGAN--------QAFVNIVLTLCDAG--DSVVMF--APYYFN-S--YMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 89 ~~~v~~~~g~t--------~a~~~~~~~l~~~g--d~Vl~~--~p~~~~-~--~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
...+++|.|-+ .....++....+.| -+|++. .|...+ . ...+...|+++..+ +..
T Consensus 118 ~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI-~Ds--------- 187 (303)
T TIGR00524 118 DGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLI-TDS--------- 187 (303)
T ss_pred CCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEE-Chh---------
Confidence 45578887655 33333444444343 356665 566555 2 24455678888777 211
Q ss_pred HHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe-ece
Q 015890 154 WLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD-NTY 206 (398)
Q Consensus 154 ~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livD-e~~ 206 (398)
.+...+..+. +..|++. ..-..-|.+.++----.++-+|+.+++++++= +.|
T Consensus 188 a~~~~m~~~~-vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~a~s~ 241 (303)
T TIGR00524 188 MAAYFMQKGE-IDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVAAPLS 241 (303)
T ss_pred HHHHHccccC-CCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEecccc
Confidence 2222333212 4555554 22234455545444456677788999988864 445
No 423
>PRK10595 SOS cell division inhibitor; Provisional
Probab=61.12 E-value=88 Score=25.36 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=59.7
Q ss_pred cEEEe---cChHHHHHHHHHHh---ccCCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 91 SVMVT---AGANQAFVNIVLTL---CDAGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 91 ~v~~~---~g~t~a~~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
++++. +|-.+ . +++..| ...+.-|+...|.+..+...+...|+ +++.+.+.++. -.+...|+.++.
T Consensus 30 Ell~~~~qpg~~e-~-LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~---d~Lwa~EqaLrs 104 (164)
T PRK10595 30 ELVYREDQPMMTQ-L-LLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPC---HTVEAMERALRT 104 (164)
T ss_pred EEeecCCCchHHH-H-HHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcH---HHHHHHHHHHhh
Confidence 56664 44434 1 444444 34556777788888899999999997 45555222211 135677888887
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015890 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (398)
+. +.+ ++.... + -.+.+.+++|--.|++-+.+.
T Consensus 105 G~-~~a-VL~Wlp---~-~l~~~~~RRLQlAAe~g~~l~ 137 (164)
T PRK10595 105 GN-YSV-VLGWLP---D-ELTEEEHARLVDAAQEGNAMG 137 (164)
T ss_pred CC-CcE-EEECCc---c-cCCHHHHHHHHHHHHhCCCEE
Confidence 65 344 444421 1 245777888887777665543
No 424
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.73 E-value=89 Score=25.32 Aligned_cols=89 Identities=19% Similarity=0.103 Sum_probs=50.8
Q ss_pred EEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 93 MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++.++...=..++..|++.|-+|.+..-.-..... ..+++++.. .. .|.+.+.+.+.. ..+|+...
T Consensus 2 ~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~-d~------~d~~~~~~al~~---~d~vi~~~ 68 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQG-DL------FDPDSVKAALKG---ADAVIHAA 68 (183)
T ss_dssp EEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEES-CT------TCHHHHHHHHTT---SSEEEECC
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccccccee-ee------hhhhhhhhhhhh---cchhhhhh
Confidence 344433334445666676777777655443222222 455666554 22 377899999884 35655553
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCC
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
+.++. +.+..+.+++.|++.|+
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 32222 25667888888887764
No 425
>PRK04296 thymidine kinase; Provisional
Probab=60.35 E-value=58 Score=27.08 Aligned_cols=95 Identities=9% Similarity=0.129 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPG 174 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~ 174 (398)
|.++..+. .+...|.+|++..|... +....+...|.+...+ .. ...+++.+.+.. ...+.+|++...+
T Consensus 17 T~~l~~~~-~~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~-~~------~~~~~~~~~~~~~~~~~dvviIDEaq 88 (190)
T PRK04296 17 TELLQRAY-NYEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAI-PV------SSDTDIFELIEEEGEKIDCVLIDEAQ 88 (190)
T ss_pred HHHHHHHH-HHHHcCCeEEEEeccccccccCCcEecCCCCcccce-Ee------CChHHHHHHHHhhCCCCCEEEEEccc
Confidence 34444444 44456778887766422 2333444445432221 11 122333333221 2225788888653
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.++.+++.++.+.++..|+.+|+=.-.
T Consensus 89 -----~l~~~~v~~l~~~l~~~g~~vi~tgl~ 115 (190)
T PRK04296 89 -----FLDKEQVVQLAEVLDDLGIPVICYGLD 115 (190)
T ss_pred -----cCCHHHHHHHHHHHHHcCCeEEEEecC
Confidence 366777888888888889888875433
No 426
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=59.90 E-value=21 Score=31.10 Aligned_cols=46 Identities=17% Similarity=0.219 Sum_probs=33.1
Q ss_pred ChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 151 d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
+.+.+++.++ ++..+++|. +|.+.+.+.++.+.++.++++.++|+|
T Consensus 44 ~~~~~~~ql~~~~~~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~D 92 (246)
T PF08543_consen 44 DSEMIKAQLDALLEDMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLD 92 (246)
T ss_dssp -HHHHHHHHHHHHHTSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE
T ss_pred CHHHHHHHHHHhcccccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEe
Confidence 5566666554 233367887 688999999999999999899999999
No 427
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=59.16 E-value=1.2e+02 Score=26.35 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCC----CCCCCChHHHHHhhc--cCCCCe
Q 015890 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSS----KTLHPDADWLEKTLE--TKPTPK 166 (398)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~----~~~~~d~e~l~~~l~--~~~~~~ 166 (398)
.+..|+..+++.+- -.+|.+..|.-.. ....++..|++++.+...+. +-..++++.+.+.+. ..+.+.
T Consensus 106 t~~~A~~~AL~alg--~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aD 183 (239)
T TIGR02990 106 TPSSAAVDGLAALG--VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDAD 183 (239)
T ss_pred CHHHHHHHHHHHcC--CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCC
Confidence 34467777777772 2688888884432 33456788998876522221 113568888888876 234478
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+|++..-|-+| +.-|-++=++.|.+++. ..+
T Consensus 184 AifisCTnLrt--------~~vi~~lE~~lGkPVls-SNq 214 (239)
T TIGR02990 184 ALFLSCTALRA--------ATCAQRIEQAIGKPVVT-SNQ 214 (239)
T ss_pred EEEEeCCCchh--------HHHHHHHHHHHCCCEEE-HHH
Confidence 99987333333 44455555677888754 344
No 428
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=58.61 E-value=87 Score=24.50 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=39.0
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..++..|.+++++ |....++++.+...+.. +++|.++.-.+ .....++++.+.+++.
T Consensus 25 ~~lr~~G~eVi~L------G~~vp~e~i~~~a~~~~-~d~V~lS~~~~-----~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTEAGFEVINL------GVMTSQEEFIDAAIETD-ADAILVSSLYG-----HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEcCccc-----cCHHHHHHHHHHHHhc
Confidence 4668889999887 33457788877776554 68888875433 2344577777777765
No 429
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=58.29 E-value=39 Score=29.61 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=51.0
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCcEEEEeccCCCCCCCC-ChHHHHHhhccCCCCeEE
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLV 168 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-d~e~l~~~l~~~~~~~~v 168 (398)
+|++-.|++++-.++- .|.+.|. |+++.-+-.+....-.. .+..+ .. | .+ |.+.+++.++++. +++|
T Consensus 2 ~ILvlgGTtE~r~la~-~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v-~~------G-~lg~~~~l~~~l~~~~-i~~v 70 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAE-RLAEAGY-VIVSVATSYGGELLKPELPGLEV-RV------G-RLGDEEGLAEFLRENG-IDAV 70 (249)
T ss_pred EEEEEechHHHHHHHH-HHHhcCC-EEEEEEhhhhHhhhccccCCceE-EE------C-CCCCHHHHHHHHHhCC-CcEE
Confidence 5788899999988554 5555666 55543332222211111 11222 22 1 34 7888888888665 5555
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (398)
+= .+.|.....+ +.+.+.|++.|+..
T Consensus 71 ID--ATHPfA~~is----~na~~a~~~~~ipy 96 (249)
T PF02571_consen 71 ID--ATHPFAAEIS----QNAIEACRELGIPY 96 (249)
T ss_pred EE--CCCchHHHHH----HHHHHHHhhcCcce
Confidence 43 3344433332 55667788888763
No 430
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=57.34 E-value=1.2e+02 Score=25.76 Aligned_cols=162 Identities=13% Similarity=0.146 Sum_probs=80.2
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHHH----H
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAFV----N 104 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~~----~ 104 (398)
+++=.++-+-.++.-++..+.|+++...-.. -+-+-..|.+.=-+.+++ +.+... ...++++-+.|.+.++. .
T Consensus 26 GhvlvGVLskny~tve~av~~mk~y~~~~~~avSVGLGaGdp~Q~~~Va~-Ia~~~~P~HVNQvFtgag~sr~~Lg~~~T 104 (236)
T TIGR03581 26 GHVLIGVLSKNYPTVEEAIEDMKKYQKEIDNAVSVGLGAGDPNQSAMVAD-ISAHTQPQHINQVFTGVGTSRALLGQADT 104 (236)
T ss_pred CcEEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHH-HHHHcCCccccccccchHHHHHHhCCccc
Confidence 3444444444555667777777776543221 122223333433333333 333332 22455665555554433 1
Q ss_pred HHHHhccCC---CEEEEeCC-CCc----------ChhhHHHhcCc-EEEEeccCCCCCCCCChHHHHHh---hccCCCCe
Q 015890 105 IVLTLCDAG---DSVVMFAP-YYF----------NSYMSFQMTGV-THILVGPCSSKTLHPDADWLEKT---LETKPTPK 166 (398)
Q Consensus 105 ~~~~l~~~g---d~Vl~~~p-~~~----------~~~~~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~---l~~~~~~~ 166 (398)
++-+|..|. ..|-+... --. .....++..|. .+.++ |+.--. .+|++... +..+
T Consensus 105 ~vN~LvsPTG~~G~VkISTGp~Ss~~~~~iV~vetAiaml~dmG~~SiKff-PM~Gl~---~leE~~avA~aca~~---- 176 (236)
T TIGR03581 105 VINGLVSPTGTPGLVNISTGPLSSQGKEAIVPIETAIAMLKDMGGSSVKFF-PMGGLK---HLEEYAAVAKACAKH---- 176 (236)
T ss_pred eEEEeecCCCccceEEeccCcccccCCCceeeHHHHHHHHHHcCCCeeeEe-ecCCcc---cHHHHHHHHHHHHHc----
Confidence 222233221 12222221 110 12245577776 56666 775222 34444443 3332
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.+++ -|||-+ +.+.+++|.++|.+.|+..|+=-+|
T Consensus 177 g~~l----EPTGGI-dl~Nf~~I~~i~ldaGv~kviPHIY 211 (236)
T TIGR03581 177 GFYL----EPTGGI-DLDNFEEIVQIALDAGVEKVIPHVY 211 (236)
T ss_pred CCcc----CCCCCc-cHHhHHHHHHHHHHcCCCeeccccc
Confidence 2344 378876 7778999999999999887776555
No 431
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=56.89 E-value=85 Score=23.84 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=35.8
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..++..|.+++.. . ....++++.+...+.. +++|+++.... ...+.++++++.+++.
T Consensus 21 ~~l~~~G~~vi~l-G-----~~vp~e~~~~~a~~~~-~d~V~iS~~~~-----~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 21 RALRDAGFEVIYT-G-----LRQTPEEIVEAAIQED-VDVIGLSSLSG-----GHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHHCCCEEEEC-C-----CCCCHHHHHHHHHHcC-CCEEEEcccch-----hhHHHHHHHHHHHHhc
Confidence 4568888888876 2 2245666666665443 68888874322 2344577777777765
No 432
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=56.78 E-value=25 Score=31.95 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=40.4
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+..+++++..++-+|+.+|.+..+.+-+.-. .. ..|..++.+++++|++.|+++|+-||-.
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~---------~g----~~~~~yT~~di~elv~yA~~rgI~vIPE 87 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ---------KA----SDGLYYTQEQIREVVAYARDRGIRVVPE 87 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccc---------cC----CCCCccCHHHHHHHHHHHHHcCCEEEEe
Confidence 445566777777644566676554332222111 10 1355689999999999999999988844
No 433
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=56.18 E-value=65 Score=26.96 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=55.0
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcCh---hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEE
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNS---YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVS 169 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~ 169 (398)
+|=|+.+-..+......|.+|++..|....- .......|.+.-.+ ..+ +.+++-+.+. ....+..|.
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~-~i~------~~~~i~~~i~~~~~~~~~~~v~ 87 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAV-VIP------SDTDIFDEIAALHEKPPVDCVL 87 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCCcccce-ecC------ChHHHHHHHHhcccCCCcCEEE
Confidence 5666666666666666778899988887432 22233344332222 111 1222333332 111146777
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 170 i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
|.-.+ .++++.+..+.+++.+.|+.+++=
T Consensus 88 IDEaQ-----F~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 88 IDEAQ-----FFDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred EehhH-----hCCHHHHHHHHHHHhhcCCEEEEe
Confidence 77544 366788888888888888888854
No 434
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=55.97 E-value=76 Score=28.23 Aligned_cols=97 Identities=21% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHHHHhccCCCEEEEeCCC-CcC-----hhhHHHhcCcEEEEeccCCCCCCCCChH-----HHHHhhccCCCCeEEEE
Q 015890 102 FVNIVLTLCDAGDSVVMFAPY-YFN-----SYMSFQMTGVTHILVGPCSSKTLHPDAD-----WLEKTLETKPTPKLVSV 170 (398)
Q Consensus 102 ~~~~~~~l~~~gd~Vl~~~p~-~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e-----~l~~~l~~~~~~~~v~i 170 (398)
...+...+.+.|.+|++.+.. |.. ....++..|..++.. ... .|+. .++.....+ ...|++
T Consensus 89 ~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~-~~~-----~dp~~~~~~~l~~~~~~~--~D~ViI 160 (272)
T TIGR00064 89 IAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQ-KEG-----ADPAAVAFDAIQKAKARN--IDVVLI 160 (272)
T ss_pred HHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeC-CCC-----CCHHHHHHHHHHHHHHCC--CCEEEE
Confidence 333334455667777655433 322 122345566555433 211 2332 233333332 478888
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHH------HcCCEEEEeece
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCK------AAGSWLVVDNTY 206 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~------~~~~~livDe~~ 206 (398)
..|....-...-.++++++.+.++ .+++++++|...
T Consensus 161 DT~G~~~~d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 161 DTAGRLQNKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred eCCCCCcchHHHHHHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 865322111111234566666666 567888888643
No 435
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=55.96 E-value=22 Score=32.92 Aligned_cols=65 Identities=6% Similarity=0.055 Sum_probs=43.5
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+..+.+++..++-.|..+|.+..+.+.+.-..+ ....|..++.+++++|++.|+++|+-||-.
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g-----------a~~~~~~YT~~di~eiv~yA~~rgI~vIPE 89 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG-----------AYSPSEVYTPEDVKEIVEYARLRGIRVIPE 89 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc-----------CcCCCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 44456677777774566667766554443332211 113456789999999999999999998854
No 436
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=55.48 E-value=1.1e+02 Score=29.86 Aligned_cols=76 Identities=8% Similarity=-0.004 Sum_probs=43.8
Q ss_pred CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 113 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+..+++..+.| .-.++.+|++...+ .....+..+++.+|.+.++ ... +++|+.....++ . ...+
T Consensus 371 ~r~vvt~H~af---~YLa~~YGL~~~~~-~~~~~~~ePS~~~L~~Li~~IK~~~-V~~IF~Epq~~~-----~---~~~l 437 (479)
T TIGR03772 371 RRHLITTHDAY---SYLGQAYGLNIAGF-VTPNPAVEPSLADRRRLTRTIENLK-VPAVFLEPNLAA-----R---STTL 437 (479)
T ss_pred CCEEEEECCcH---HHHHHHCCCeEEee-eccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCCC-----c---hHHH
Confidence 45677777655 33458899988765 2223344566666655554 444 788887733221 1 2334
Q ss_pred HHHHHHcCCEEE
Q 015890 190 SDLCKAAGSWLV 201 (398)
Q Consensus 190 ~~l~~~~~~~li 201 (398)
-.++++.|+.++
T Consensus 438 ~~IA~e~Gv~V~ 449 (479)
T TIGR03772 438 NEIADELGVRVC 449 (479)
T ss_pred HHHHHHcCCcEE
Confidence 445667787653
No 437
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=55.37 E-value=81 Score=23.56 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=44.0
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeec
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNT 205 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~ 205 (398)
..++..|.++..+ .. ..+.+++.+.+.... +++|.++.... ...+...++++..++. ++.+++=..
T Consensus 22 ~~l~~~G~~v~~~-d~-----~~~~~~l~~~~~~~~-pd~V~iS~~~~-----~~~~~~~~l~~~~k~~~p~~~iv~GG~ 89 (121)
T PF02310_consen 22 AYLRKAGHEVDIL-DA-----NVPPEELVEALRAER-PDVVGISVSMT-----PNLPEAKRLARAIKERNPNIPIVVGGP 89 (121)
T ss_dssp HHHHHTTBEEEEE-ES-----SB-HHHHHHHHHHTT-CSEEEEEESSS-----THHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHCCCeEEEE-CC-----CCCHHHHHHHHhcCC-CcEEEEEccCc-----CcHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 4567789998877 33 235578888776553 68888874322 2344577777777665 778887776
Q ss_pred e
Q 015890 206 Y 206 (398)
Q Consensus 206 ~ 206 (398)
+
T Consensus 90 ~ 90 (121)
T PF02310_consen 90 H 90 (121)
T ss_dssp S
T ss_pred c
Confidence 6
No 438
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=54.94 E-value=48 Score=30.26 Aligned_cols=35 Identities=14% Similarity=-0.029 Sum_probs=22.8
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 353 (398)
..+.+.+..+.....++++ +..+.||.-.+|++|.
T Consensus 254 ~~~~i~~~~Gi~~~~~~~~-~a~~~g~i~k~g~w~~ 288 (321)
T TIGR02012 254 AEFDILYGEGISKLGEIID-LAVELDIIKKAGSWYS 288 (321)
T ss_pred eEEEEEcCCccchhhHHHH-HHHhCCcEEcccCEEE
Confidence 3344555555544556666 5568999999998763
No 439
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=54.78 E-value=89 Score=23.44 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=36.7
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..++..|.+++.. . .....+++.+.+.+.. +++|.++.-.. ...+.+.++++.+++.
T Consensus 21 ~~l~~~G~~V~~l-g-----~~~~~~~l~~~~~~~~-pdvV~iS~~~~-----~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 21 RALRDAGFEVIDL-G-----VDVPPEEIVEAAKEED-ADAIGLSGLLT-----THMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHCCCEEEEC-C-----CCCCHHHHHHHHHHcC-CCEEEEecccc-----ccHHHHHHHHHHHHHc
Confidence 4667889998766 2 2346777777766544 68888873321 2334577888877765
No 440
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=54.03 E-value=1.5e+02 Score=25.81 Aligned_cols=163 Identities=12% Similarity=0.078 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccCCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVVYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
..+.+..+..+++-+.+.++...++. ..-|.+.++..+++.++. .++-+.+++. ...+- ++++
T Consensus 18 ~~~~~~~~~l~~~ad~iElgip~sdp~adG~~i~~~~~~a~~~g~----------~~~v~~vr~~----~~~Pl--~lM~ 81 (244)
T PRK13125 18 ESFKEFIIGLVELVDILELGIPPKYPKYDGPVIRKSHRKVKGLDI----------WPLLEEVRKD----VSVPI--ILMT 81 (244)
T ss_pred HHHHHHHHHHHhhCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCc----------HHHHHHHhcc----CCCCE--EEEE
Confidence 33444545444447888888865433 234566666666554421 2333333322 12221 2222
Q ss_pred --cChHHHHHHHHHHhccCC-CEEEEeCCC-----C-cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe
Q 015890 96 --AGANQAFVNIVLTLCDAG-DSVVMFAPY-----Y-FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK 166 (398)
Q Consensus 96 --~g~t~a~~~~~~~l~~~g-d~Vl~~~p~-----~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~ 166 (398)
+--.......+..+...| |.|+++.-. + ..+...++..|+++... ..+.. +.+.++..++..+ .
T Consensus 82 y~n~~~~~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~--v~p~T---~~e~l~~~~~~~~--~ 154 (244)
T PRK13125 82 YLEDYVDSLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFF--TSPKF---PDLLIHRLSKLSP--L 154 (244)
T ss_pred ecchhhhCHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEE--ECCCC---CHHHHHHHHHhCC--C
Confidence 111233334444555555 778876421 1 23456678889877655 22221 5678888887654 5
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEe
Q 015890 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVD 203 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-~~~livD 203 (398)
.+++ ..++-||..++..-.+.+.++.+-. +..+++|
T Consensus 155 ~l~m-sv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~ 191 (244)
T PRK13125 155 FIYY-GLRPATGVPLPVSVERNIKRVRNLVGNKYLVVG 191 (244)
T ss_pred EEEE-EeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEe
Confidence 6666 3444556655443233333332222 3455666
No 441
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=53.87 E-value=1e+02 Score=25.70 Aligned_cols=85 Identities=18% Similarity=0.147 Sum_probs=41.0
Q ss_pred hccCCCEEEEeCCCCcChhhHHHh-c-------CcEEEEeccCCCC----CC-CCChHHHHHhhc--cCCCCeEEEEeCC
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSFQM-T-------GVTHILVGPCSSK----TL-HPDADWLEKTLE--TKPTPKLVSVVNP 173 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~~~-~-------g~~~~~~~~~~~~----~~-~~d~e~l~~~l~--~~~~~~~v~i~~p 173 (398)
+++|||+||=...+-.+|.+.+.. . |+....+.|.... +. .-|++...+..+ ++..+.+|+-.-.
T Consensus 66 ~l~p~~~VlD~G~APGsWsQVavqr~~p~g~v~gVDllh~~p~~Ga~~i~~~dvtdp~~~~ki~e~lp~r~VdvVlSDMa 145 (232)
T KOG4589|consen 66 FLRPEDTVLDCGAAPGSWSQVAVQRVNPNGMVLGVDLLHIEPPEGATIIQGNDVTDPETYRKIFEALPNRPVDVVLSDMA 145 (232)
T ss_pred ccCCCCEEEEccCCCChHHHHHHHhhCCCceEEEEeeeeccCCCCcccccccccCCHHHHHHHHHhCCCCcccEEEeccC
Confidence 446777777443333456655422 2 2344443222110 00 014444444333 2332455554445
Q ss_pred CCCCccCCCHHHHHHHHHHHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~ 195 (398)
.|+||.-+.+ -.+++++|..
T Consensus 146 pnaTGvr~~D--h~~~i~LC~s 165 (232)
T KOG4589|consen 146 PNATGVRIRD--HYRSIELCDS 165 (232)
T ss_pred CCCcCcchhh--HHHHHHHHHH
Confidence 6999996432 5667777764
No 442
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=52.79 E-value=34 Score=29.92 Aligned_cols=48 Identities=19% Similarity=0.301 Sum_probs=35.6
Q ss_pred ChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-EEEEeece
Q 015890 151 DADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS-WLVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~-~livDe~~ 206 (398)
+.+.+++.++ +-+ +++|- +|.+.+.+.++.+.+.+++++. ++++|-+.
T Consensus 51 ~~~~~~~q~~~~~~d~~-~~aik-------iG~l~~~~~~~~i~~~~~~~~~~~vVlDPv~ 103 (254)
T TIGR00097 51 PPDFVEAQLDAVFSDIP-VDAAK-------TGMLASAEIVEAVARKLREYPVRPLVVDPVM 103 (254)
T ss_pred CHHHHHHHHHHHHhCCC-CCEEE-------ECCcCCHHHHHHHHHHHHhcCCCcEEECCcc
Confidence 5555555554 333 56666 6888888999999999999998 69999544
No 443
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=52.73 E-value=72 Score=28.63 Aligned_cols=58 Identities=7% Similarity=-0.038 Sum_probs=37.2
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ +.. ++.+++. .++--+..++.++..++++.+.+. ++++|+
T Consensus 11 Pf~~dg-~iD~~~l~~l~~~l~~~G-v~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDADG-SFDEDAYRAHVEWLLSYG-AAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 555554 789888888776 222 5677655 334445678888888888876553 344443
No 444
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=52.64 E-value=59 Score=29.68 Aligned_cols=105 Identities=20% Similarity=0.141 Sum_probs=62.3
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcC--hhh----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEE
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~--~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
.|=|..+--+...+.+.|-+|++....-+. ..+ ..+..|+.++.- ....+.-.+-.|.++.+...+ ..+|+
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~-~~G~DpAaVafDAi~~Akar~--~Dvvl 226 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISG-KEGADPAAVAFDAIQAAKARG--IDVVL 226 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEcc-CCCCCcHHHHHHHHHHHHHcC--CCEEE
Confidence 566778888888888889888775444322 222 335567777654 211111112256677766655 48888
Q ss_pred EeCC---CCCCccCCCHHHHHHHHHHHHHcC------CEEEEeece
Q 015890 170 VVNP---GNPSGTYIPERLLKRISDLCKAAG------SWLVVDNTY 206 (398)
Q Consensus 170 i~~p---~nptG~~~~~~~l~~i~~l~~~~~------~~livDe~~ 206 (398)
+... ||-+.. .++|+.|..++++.. +++++|..-
T Consensus 227 iDTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAtt 269 (340)
T COG0552 227 IDTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDATT 269 (340)
T ss_pred EeCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEccc
Confidence 8854 333322 235777777777654 677778655
No 445
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=52.63 E-value=1.5e+02 Score=27.47 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=57.5
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEE--EeCCCCc------ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVV--MFAPYYF------NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl--~~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
.+-++..+||-.+..++..+...-|.+++ ..++++. .....++.+|++...+ .. +.+.+.....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i-~~-------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTI-TI-------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEE-eC-------CHHHHHHHHH
Confidence 45677779998888876444222344444 3455553 2334556688877766 32 4444443332
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
..- + +..+|...+. ......+.++|+++|+.+|+.+..
T Consensus 132 ~~~--~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 132 AYF--K-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred HHH--h-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCC
Confidence 110 1 1223322221 223577788999999999999766
No 446
>PRK09354 recA recombinase A; Provisional
Probab=52.50 E-value=57 Score=30.15 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=23.3
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 353 (398)
-.+.+.+..+.....++++ +..+.||...+|++|.
T Consensus 259 a~~~i~~~~Gi~~~~~~~d-~a~~~g~i~k~g~w~~ 293 (349)
T PRK09354 259 AEFDIMYGEGISREGELID-LGVELGIIEKSGAWYS 293 (349)
T ss_pred eEEEEEcCCccchhhhHHH-HHHhCCcEEcccCEEE
Confidence 3455556665544556666 5568999999998763
No 447
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=52.01 E-value=1.2e+02 Score=27.20 Aligned_cols=91 Identities=13% Similarity=0.246 Sum_probs=57.4
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcC--cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC--
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-- 180 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~-- 180 (398)
+..-|.+.|..||+|--+-......++..| ..+++. +.+. -|.|.|++..++.. -+|=+..-..+|+..
T Consensus 77 vvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~-~fd~----~DedSIr~vvk~sN--VVINLIGrd~eTknf~f 149 (391)
T KOG2865|consen 77 VVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFM-KFDL----RDEDSIRAVVKHSN--VVINLIGRDYETKNFSF 149 (391)
T ss_pred HHHHHhhcCCeEEEeccCCccchhheeecccccceeee-ccCC----CCHHHHHHHHHhCc--EEEEeeccccccCCccc
Confidence 444566789999999666655555556666 356655 4442 27889999888643 333333345667653
Q ss_pred --CCHHHHHHHHHHHHHcCCEEEE
Q 015890 181 --IPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 181 --~~~~~l~~i~~l~~~~~~~liv 202 (398)
....--++|+.+|++-|+--++
T Consensus 150 ~Dvn~~~aerlAricke~GVerfI 173 (391)
T KOG2865|consen 150 EDVNVHIAERLARICKEAGVERFI 173 (391)
T ss_pred ccccchHHHHHHHHHHhhChhhee
Confidence 1233468999999998864433
No 448
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=51.91 E-value=1.6e+02 Score=25.65 Aligned_cols=85 Identities=13% Similarity=0.121 Sum_probs=53.0
Q ss_pred CCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE
Q 015890 89 KSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~ 167 (398)
+.-++-.+++.++-.+++.+- .+---.|++|...-..-....+.+|.+++++.+..+ |-|.+.+.+.+.+ ..
T Consensus 73 ~kgvithSSGNHaqAlalaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~~~-----sRE~va~~ltee~--g~ 145 (323)
T KOG1251|consen 73 AKGVITHSSGNHAQALALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPTVE-----SRESVAKDLTEET--GY 145 (323)
T ss_pred cCceEeecCCcHHHHHHHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCccc-----hHHHHHHHHHHhc--Cc
Confidence 445666666666655555542 232357888876655555667889999999833322 6788888887654 33
Q ss_pred EEEeCCCCCCccCC
Q 015890 168 VSVVNPGNPSGTYI 181 (398)
Q Consensus 168 v~i~~p~nptG~~~ 181 (398)
++.+|+|...++.
T Consensus 146 -~~i~Py~~p~vIa 158 (323)
T KOG1251|consen 146 -YLIHPYNHPSVIA 158 (323)
T ss_pred -EEeCCCCCcceee
Confidence 4445776554543
No 449
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=51.68 E-value=47 Score=30.72 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=34.4
Q ss_pred ChHHHHHhhccCCCCeEEEEeCC-CCCCccC--CCHHHHHHHHHHHHHcCCEEEE
Q 015890 151 DADWLEKTLETKPTPKLVSVVNP-GNPSGTY--IPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p-~nptG~~--~~~~~l~~i~~l~~~~~~~liv 202 (398)
+++.+..+++.+ ..+|++..+ .|-.+.. ++.+++++.+++|+++|..+++
T Consensus 15 ~l~~l~~ai~~G--ADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V 67 (347)
T COG0826 15 NLEDLKAAIAAG--ADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYV 67 (347)
T ss_pred CHHHHHHHHHcC--CCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 567777777765 377887754 3444444 7788888888888888875443
No 450
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=51.20 E-value=1e+02 Score=23.81 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=37.7
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
..++..|++++.. -. ...+|.+-++..+.. +.+|.++.-...+ .+.++++.+.+++.|+
T Consensus 21 ~~L~~~GfeVidL-G~-----~v~~e~~v~aa~~~~-adiVglS~L~t~~-----~~~~~~~~~~l~~~gl 79 (128)
T cd02072 21 HAFTEAGFNVVNL-GV-----LSPQEEFIDAAIETD-ADAILVSSLYGHG-----EIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHCCCEEEEC-CC-----CCCHHHHHHHHHHcC-CCEEEEeccccCC-----HHHHHHHHHHHHHCCC
Confidence 4678889999877 32 345666655554433 5888887433222 3457888888887754
No 451
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=51.17 E-value=1.3e+02 Score=28.18 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=56.8
Q ss_pred CCCCCcEEEe-----cChHHHHHHHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 86 KLYKSSVMVT-----AGANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 86 ~~~~~~v~~~-----~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
|+.+..+++. .|=|..+..+...+.+.|.+|+........ ...-++..|...-.+ .... ..+++.+.+.
T Consensus 78 Gi~~GslvLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi~~Ra~rlg~~~~~l-~l~~---e~~le~I~~~ 153 (372)
T cd01121 78 GLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQIKLRADRLGISTENL-YLLA---ETNLEDILAS 153 (372)
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHHHHHHHHcCCCcccE-EEEc---cCcHHHHHHH
Confidence 4555544443 233444444444455556677665433211 112234455422111 1111 1267888888
Q ss_pred hccCCCCeEEEEeCCCCCCc-----cCCCH----HHHHHHHHHHHHcCCEEEE
Q 015890 159 LETKPTPKLVSVVNPGNPSG-----TYIPE----RLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG-----~~~~~----~~l~~i~~l~~~~~~~liv 202 (398)
++... +++|+|.+.++... ..-+. +.+.+|.++++++|+.+++
T Consensus 154 i~~~~-~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 154 IEELK-PDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred HHhcC-CcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 87544 79999887654321 11112 2345677889999987665
No 452
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=50.49 E-value=1.1e+02 Score=23.84 Aligned_cols=60 Identities=15% Similarity=0.095 Sum_probs=39.2
Q ss_pred hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015890 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 127 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
...++..|++++.. - ....+|.+-++..+.. +.+|.++.-.. ...+.++++.+.+++.|+
T Consensus 22 ~~~l~~~GfeVi~L-G-----~~v~~e~~v~aa~~~~-adiVglS~l~~-----~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 22 DHAFTNAGFNVVNL-G-----VLSPQEEFIKAAIETK-ADAILVSSLYG-----HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHCCCEEEEC-C-----CCCCHHHHHHHHHHcC-CCEEEEecccc-----cCHHHHHHHHHHHHHCCC
Confidence 35678899999887 3 2345666666555433 58888875432 224458888888888764
No 453
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=50.04 E-value=1.5e+02 Score=26.60 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhc-cC
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLE-TK 162 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~ 162 (398)
+..+-|++|.||+..=..+..-+.+.|.++++.+-.-.+..+.. +..| ++..+ ..|-.. .-+...+.+.++ +.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y-~cdis~-~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAY-TCDISD-REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEE-EecCCC-HHHHHHHHHHHHHhc
Confidence 44566777777755555666667788887766665555544433 3334 55555 443221 113444444554 22
Q ss_pred CCCeEEEEeCCCCCC---ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 163 PTPKLVSVVNPGNPS---GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 163 ~~~~~v~i~~p~npt---G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
..+. |+++|..--+ ..-++++++++..++ |+.=+..-+. |.. .......++.+.+.|..-.+|++|
T Consensus 113 G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~v----N~~~~f~t~kaFLP---~M~~~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 113 GDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDV----NTIAHFWTTKAFLP---KMLENNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred CCce-EEEeccccccCCCccCCCHHHHHHHHHH----hhHHHHHHHHHHhH---HHHhcCCceEEEehhhhcccCCcc
Confidence 2133 4444442222 233677778777664 2220001000 111 111223456777777776676665
No 454
>PRK10785 maltodextrin glucosidase; Provisional
Probab=49.19 E-value=47 Score=33.39 Aligned_cols=56 Identities=21% Similarity=0.183 Sum_probs=38.6
Q ss_pred ChHHHHHhhc--cCCCCeEEEEeCCC-CCCc--c-----------CCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 151 DADWLEKTLE--TKPTPKLVSVVNPG-NPSG--T-----------YIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~l~--~~~~~~~v~i~~p~-nptG--~-----------~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
|+.-|.+.|+ ..-.+.+|+++.+. +|+. . .-+.++++++++.|+++|+.||+|-++
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~ 248 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVF 248 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 6666666665 22226777777432 2221 1 125688999999999999999999987
No 455
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=48.86 E-value=89 Score=28.28 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=38.8
Q ss_pred cCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 133 TGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 133 ~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
.|+-+..+-|.++++ .+|.+.+++.++ ... ++.+++. .++--+..++.++..++.+.+.+
T Consensus 9 ~Gv~~a~vTPf~~dg-~iD~~~l~~li~~l~~~G-v~Gi~~~-GstGE~~~Lt~eEr~~~~~~~~~ 71 (303)
T PRK03620 9 SGLLSFPVTPFDADG-SFDEAAYREHLEWLAPYG-AAALFAA-GGTGEFFSLTPDEYSQVVRAAVE 71 (303)
T ss_pred CceEEeeeCCCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-cCCcCcccCCHHHHHHHHHHHHH
Confidence 354443343666554 789999988887 332 5777755 33334456888988888887654
No 456
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=48.61 E-value=89 Score=23.96 Aligned_cols=48 Identities=23% Similarity=0.398 Sum_probs=32.1
Q ss_pred CCCChHHHHHhhccCCCCeEEEEe--CC---CCCCccCCCHHHHHHHHHHHHHcC
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVV--NP---GNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~--~p---~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..+|++.+.+++..+. +.|++. .| ++..|.....+.++.+.++..+.|
T Consensus 38 Grv~~~~il~Af~~GA--DGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 38 GRVDPEFILRAFEKGA--DGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred CccCHHHHHHHHHcCC--CEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 4789999999998764 666663 33 345666666666666666655543
No 457
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=48.18 E-value=2.6e+02 Score=26.90 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=20.4
Q ss_pred CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 355 RGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 355 ~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
....||+-++ .+..|+.++++.+.+.-
T Consensus 388 sR~~Ria~GsG~~~~~v~~ll~~~~~~~ 415 (437)
T PRK00771 388 SRIRRIARGSGTTVEDVRELLKYYKMMK 415 (437)
T ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 3457888887 78899998888776543
No 458
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=47.89 E-value=46 Score=28.73 Aligned_cols=49 Identities=10% Similarity=0.226 Sum_probs=34.1
Q ss_pred ChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEeece
Q 015890 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-~~~livDe~~ 206 (398)
+.+.+++.++ ++..+++|.+ |.+.+.+.++.+.++++++ +.++++|-+.
T Consensus 52 ~~~~~~~~l~~~~~~~~~~~i~~-------G~l~~~~~~~~i~~~~~~~~~~~vv~Dpv~ 104 (242)
T cd01169 52 PPEFVAAQLDAVLEDIPVDAIKI-------GMLGSAEIIEAVAEALKDYPDIPVVLDPVM 104 (242)
T ss_pred CHHHHHHHHHHHHhCCCCCEEEE-------CCCCCHHHHHHHHHHHHhCCCCcEEECCce
Confidence 4444444443 2223677764 7888889999999999987 8899999543
No 459
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=47.75 E-value=1.8e+02 Score=24.96 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=60.4
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEE--EeCCC------Cc-----ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVV--MFAPY------YF-----NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl--~~~p~------~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
++..+||-.+..++..++.+ .+.+. ...|. ++ -...+++..|+..+.+ ..... ..-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~-~~~~~-~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKL-YTSGE-EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEE-EcCCc-hhHHHHHHHHH
Confidence 56778999999888877655 43221 12221 12 1235678888876655 33211 11134555555
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (398)
++... +.+|+ +|.+.+..+...+-.+|++.|+..
T Consensus 81 l~~~g-v~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~ 114 (222)
T TIGR00289 81 LGELD-VEALC-------IGAIESNYQKSRIDKVCRELGLKS 114 (222)
T ss_pred HHHcC-CCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 55433 56666 688888888888889999988763
No 460
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=47.33 E-value=1.5e+02 Score=24.05 Aligned_cols=102 Identities=12% Similarity=0.021 Sum_probs=60.1
Q ss_pred CcEEEecChHHHHH-HHHHHh---ccCCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 90 SSVMVTAGANQAFV-NIVLTL---CDAGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 90 ~~v~~~~g~t~a~~-~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
.+|++......-.. +++..| ...+.-|+...|-+..+...++..|+ +++.+.+.... -.++..|+.++.+
T Consensus 33 sEl~~~~~~pg~~elLLlP~L~~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~---d~lwa~EQaLrSG 109 (168)
T TIGR00623 33 SEVVYREDQPMMAQLLLLPLLQQLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPC---NTVESMIRALRTG 109 (168)
T ss_pred eEEeecCCCchhHHHHHHHHHHHhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCch---hHHHHHHHHHHhC
Confidence 35666543221112 344443 34556677777777788888899997 34444222211 1467888999877
Q ss_pred CCCeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 163 PTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 163 ~~~~~v~i~~-p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
. ...++.+ |+ ..+.+++++|--.++.-+.+.+
T Consensus 110 ~--c~aVL~WLp~-----~l~~~~lRRLqlAA~~G~al~f 142 (168)
T TIGR00623 110 N--YSVVIGWLTD-----ELTEEEHAKLVRAAEEGNAMGF 142 (168)
T ss_pred C--CcEEEecCCc-----cCCHHHHHHHHHHHHhCCCeEE
Confidence 6 4444554 32 2567778888777776555433
No 461
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=47.28 E-value=1.4e+02 Score=28.35 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCc--EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGV--THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~--~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~ 174 (398)
+..+..+...+.+.+ +|+.-...-.. ...-++.+|. +-+++ .. .-++|++.+.++... |++++|.+.+
T Consensus 107 STLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l--~a----Et~~e~I~~~l~~~~-p~lvVIDSIQ 178 (456)
T COG1066 107 STLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYL--LA----ETNLEDIIAELEQEK-PDLVVIDSIQ 178 (456)
T ss_pred HHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEE--eh----hcCHHHHHHHHHhcC-CCEEEEeccc
Confidence 334444444555555 77766555433 2233455563 22222 11 127889998888655 7999988654
Q ss_pred ---CCC-----ccC-CCHHHHHHHHHHHHHcCCEEEEee
Q 015890 175 ---NPS-----GTY-IPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 175 ---npt-----G~~-~~~~~l~~i~~l~~~~~~~livDe 204 (398)
+|. |.+ +-.+--.+|..+|++.|+.+++=.
T Consensus 179 T~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fiVG 217 (456)
T COG1066 179 TLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIVG 217 (456)
T ss_pred eeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 222 332 233445678889999998887653
No 462
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=47.05 E-value=1e+02 Score=27.73 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=37.5
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 134 GVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 134 g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
|+-+-.+-|.++++ .+|.+.+++.++ +.. ++.+++. .++--+..++.++.+++.+.+.+
T Consensus 8 Gi~~a~vTPf~~dg-~iD~~~l~~li~~l~~~G-v~gi~v~-GstGE~~~Lt~eEr~~v~~~~~~ 69 (296)
T TIGR03249 8 GLLSFPVTPFDADG-SFDEAAYRENIEWLLGYG-LEALFAA-GGTGEFFSLTPAEYEQVVEIAVS 69 (296)
T ss_pred ceEEeeeCCcCCCC-CcCHHHHHHHHHHHHhcC-CCEEEEC-CCCcCcccCCHHHHHHHHHHHHH
Confidence 44333333565554 789888888776 222 5777754 33334467888888888887655
No 463
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=46.93 E-value=1.7e+02 Score=24.49 Aligned_cols=57 Identities=11% Similarity=0.121 Sum_probs=39.1
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..++..|.+++.+ |.....+++.+.+.... +++|.++.-... ..+.++++++.+++.
T Consensus 104 ~~l~~~G~~vi~l------G~~~p~~~l~~~~~~~~-~d~v~lS~~~~~-----~~~~~~~~i~~lr~~ 160 (201)
T cd02070 104 TMLEANGFEVIDL------GRDVPPEEFVEAVKEHK-PDILGLSALMTT-----TMGGMKEVIEALKEA 160 (201)
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEeccccc-----cHHHHHHHHHHHHHC
Confidence 5678899999876 23457788888877554 688888743222 244578888877765
No 464
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=46.75 E-value=2.1e+02 Score=25.29 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=83.9
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecCh--
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGA-- 98 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~-- 98 (398)
+..+.++|-+++.++.... |...=|.+.++-.+++.++. .. ..+-+.+.+.-.+..+ ..-++++--.
T Consensus 32 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~~AL~~G~-----~~---~~~~~~~~~~r~~~~~--~p~vlm~Y~N~i 101 (258)
T PRK13111 32 IKALVEAGADIIELGIPFSDPVADGPVIQAASLRALAAGV-----TL---ADVFELVREIREKDPT--IPIVLMTYYNPI 101 (258)
T ss_pred HHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCC-----CH---HHHHHHHHHHHhcCCC--CCEEEEecccHH
Confidence 5556678889999887653 33344677777777776531 11 2233333332111112 2224444221
Q ss_pred -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
.-+++..+..+.+.| |.+++++-.+. .+...++..|+..+.+ -.+ . .+.+.++...+..+ ..|++..-
T Consensus 102 ~~~G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~l-vap-~---t~~eri~~i~~~s~--gfIY~vs~ 174 (258)
T PRK13111 102 FQYGVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFL-VAP-T---TTDERLKKIASHAS--GFVYYVSR 174 (258)
T ss_pred hhcCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEE-eCC-C---CCHHHHHHHHHhCC--CcEEEEeC
Confidence 124445555555556 77888765553 3445567778877764 111 1 13455555555443 55665434
Q ss_pred CCCCccC-CCHHHHHHHHHHHHHc-CCEEEE
Q 015890 174 GNPSGTY-IPERLLKRISDLCKAA-GSWLVV 202 (398)
Q Consensus 174 ~nptG~~-~~~~~l~~i~~l~~~~-~~~liv 202 (398)
...||.. ...+.+.+.++.++++ ++++++
T Consensus 175 ~GvTG~~~~~~~~~~~~i~~vk~~~~~pv~v 205 (258)
T PRK13111 175 AGVTGARSADAADLAELVARLKAHTDLPVAV 205 (258)
T ss_pred CCCCCcccCCCccHHHHHHHHHhcCCCcEEE
Confidence 4446662 1223355555555543 455444
No 465
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=45.63 E-value=1.6e+02 Score=24.70 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=41.4
Q ss_pred hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 127 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
...++..|.+++.+ |-....+++.+.+.+.. +++|.++....+ +.+.++++.+.+++.+
T Consensus 105 ~~~l~~~G~~vi~L------G~~vp~e~~v~~~~~~~-pd~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 163 (197)
T TIGR02370 105 VTMLRANGFDVIDL------GRDVPIDTVVEKVKKEK-PLMLTGSALMTT-----TMYGQKDINDKLKEEG 163 (197)
T ss_pred HHHHHhCCcEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEcccccc-----CHHHHHHHHHHHHHcC
Confidence 35678889999887 33457888888887654 688888743322 2455788888887763
No 466
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=45.62 E-value=2.4e+02 Score=25.76 Aligned_cols=104 Identities=16% Similarity=0.099 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhccCCCEEEEeC-CCCcC-----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFA-PYYFN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~-p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
|..+..+...+...|.+|++.. ..|.. ........|+.++.. +...+....-.+.++.....+ ...|++.+
T Consensus 128 TTt~~kLA~~l~~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~-~~~~dpa~~v~~~l~~~~~~~--~D~ViIDT 204 (318)
T PRK10416 128 TTTIGKLAHKYKAQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQ-KEGADPASVAFDAIQAAKARG--IDVLIIDT 204 (318)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEe-CCCCCHHHHHHHHHHHHHhCC--CCEEEEeC
Confidence 3333344444445566676543 33422 122345556555543 211110000123444444433 48888886
Q ss_pred CC-CCCccCCCHHHHHHHHHHHH------HcCCEEEEeece
Q 015890 173 PG-NPSGTYIPERLLKRISDLCK------AAGSWLVVDNTY 206 (398)
Q Consensus 173 p~-nptG~~~~~~~l~~i~~l~~------~~~~~livDe~~ 206 (398)
|. .+.-. .-.++++.+.++++ .++.++++|...
T Consensus 205 aGr~~~~~-~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~ 244 (318)
T PRK10416 205 AGRLHNKT-NLMEELKKIKRVIKKADPDAPHEVLLVLDATT 244 (318)
T ss_pred CCCCcCCH-HHHHHHHHHHHHHhhhcCCCCceEEEEEECCC
Confidence 53 22111 11234666666554 245677787654
No 467
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=45.38 E-value=1.8e+02 Score=25.90 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=55.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCC--EEEEeC--CCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFA--PYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd--~Vl~~~--p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
+....+++|.|-+..+..++....+.|. +|++.+ |...+ ....+...|.++..+ +. ..+-..+.
T Consensus 105 I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i-~d---------~~~~~~m~ 174 (282)
T PF01008_consen 105 INDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLI-PD---------SAVGYVMP 174 (282)
T ss_dssp C-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE--G---------GGHHHHHH
T ss_pred ccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEE-ec---------hHHHHHHH
Confidence 3456788888888888877777665553 455543 33333 234456678888877 22 12333333
Q ss_pred cCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe-ece
Q 015890 161 TKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD-NTY 206 (398)
Q Consensus 161 ~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livD-e~~ 206 (398)
. .+..|++. ..-.+.|.+..+---..++-.|+++++++++= +.|
T Consensus 175 ~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~~~ 220 (282)
T PF01008_consen 175 R--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAESY 220 (282)
T ss_dssp C--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--GG
T ss_pred H--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEcccc
Confidence 3 12444443 22233444333333456666888999998865 444
No 468
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=45.33 E-value=67 Score=25.29 Aligned_cols=54 Identities=26% Similarity=0.168 Sum_probs=39.2
Q ss_pred CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH-HHHHHHHHHH-HcCCEEE-Eee
Q 015890 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER-LLKRISDLCK-AAGSWLV-VDN 204 (398)
Q Consensus 150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~-~l~~i~~l~~-~~~~~li-vDe 204 (398)
.+.+.|.+.+++.. +..|++.-|.|..|...+.. ..+++++..+ +.++.++ .||
T Consensus 40 ~~~~~l~~li~~~~-~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DE 96 (141)
T COG0816 40 QDFNALLKLVKEYQ-VDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDE 96 (141)
T ss_pred hhHHHHHHHHHHhC-CCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 48899999998776 89999999999999887643 3566666544 4455544 565
No 469
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.20 E-value=1.1e+02 Score=27.04 Aligned_cols=94 Identities=14% Similarity=0.179 Sum_probs=53.1
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEE
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
.|++..|++++-. +...|.+.|.+|++..-+-.+... +...|...+.. ..+|.+.+++.+.... +++|+-
T Consensus 2 ~ILvlGGT~egr~-la~~L~~~g~~v~~s~~t~~~~~~-~~~~g~~~v~~-------g~l~~~~l~~~l~~~~-i~~VID 71 (256)
T TIGR00715 2 TVLLMGGTVDSRA-IAKGLIAQGIEILVTVTTSEGKHL-YPIHQALTVHT-------GALDPQELREFLKRHS-IDILVD 71 (256)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEEccCCcccc-ccccCCceEEE-------CCCCHHHHHHHHHhcC-CCEEEE
Confidence 4788888888655 444555667777765444323222 22334333333 1347778888887654 465543
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (398)
. ..|.-...+ +.+.+.|++.|+..
T Consensus 72 A--tHPfA~~is----~~a~~a~~~~~ipy 95 (256)
T TIGR00715 72 A--THPFAAQIT----TNATAVCKELGIPY 95 (256)
T ss_pred c--CCHHHHHHH----HHHHHHHHHhCCcE
Confidence 3 334433322 55667788888763
No 470
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.80 E-value=1.2e+02 Score=27.11 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=41.7
Q ss_pred CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 113 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+..+++..|.| .-.++.+|++++.+ .....+..+++.+|.+.++ +.. +++|+.....++ +.+
T Consensus 177 ~~~~v~~H~af---~Y~~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~~~~~----------~~~ 241 (287)
T cd01137 177 KRKLVTSEGAF---SYFAKAYGLKEAYL-WPINTEEEGTPKQVATLIEQVKKEK-VPAVFVESTVND----------RLM 241 (287)
T ss_pred cCEEEEecccH---HHHHHHcCCeEeec-ccCCCCCCCCHHHHHHHHHHHHHhC-CCEEEEeCCCCh----------HHH
Confidence 45677776655 33458899998765 2222344566666666554 444 677776633221 223
Q ss_pred HHHHHHcCCEE
Q 015890 190 SDLCKAAGSWL 200 (398)
Q Consensus 190 ~~l~~~~~~~l 200 (398)
-.++++.|+.+
T Consensus 242 ~~ia~~~gv~v 252 (287)
T cd01137 242 KQVAKETGAKI 252 (287)
T ss_pred HHHHHHhCCcc
Confidence 34556777765
No 471
>PRK11823 DNA repair protein RadA; Provisional
Probab=44.64 E-value=1.7e+02 Score=28.28 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCCCCcEEEec-----ChHHHHHHHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 86 KLYKSSVMVTA-----GANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 86 ~~~~~~v~~~~-----g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
|+.+..+++-. |=|..+..+...+.+.|.+|+..+..-.. ...-++.+|.....+ .... ..+++.+.+.
T Consensus 76 Gi~~Gs~~lI~G~pG~GKTtL~lq~a~~~a~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l-~~~~---e~~l~~i~~~ 151 (446)
T PRK11823 76 GLVPGSVVLIGGDPGIGKSTLLLQVAARLAAAGGKVLYVSGEESASQIKLRAERLGLPSDNL-YLLA---ETNLEAILAT 151 (446)
T ss_pred CccCCEEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccccHHHHHHHHHHcCCChhcE-EEeC---CCCHHHHHHH
Confidence 45555444432 22333333333444456677665443211 122244556422111 1111 1257788888
Q ss_pred hccCCCCeEEEEeCCCCCCc-----cCCCHH----HHHHHHHHHHHcCCEEEE
Q 015890 159 LETKPTPKLVSVVNPGNPSG-----TYIPER----LLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG-----~~~~~~----~l~~i~~l~~~~~~~liv 202 (398)
+++.. +++|+|.+.++... ..-+.. .+..|.++++++|+.+++
T Consensus 152 i~~~~-~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 152 IEEEK-PDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred HHhhC-CCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 77544 78999987654321 111222 234688889999986665
No 472
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=44.09 E-value=2.2e+02 Score=24.83 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=57.5
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCC-CCCChHHHHHhhccCCCCeEEEEe
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
..+.++++...+......|.+|+++...-.. ....+...|+++..+ +....- -..+.+.+...+.... .++|++.
T Consensus 105 ~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~-~~Y~~~~~~~~~~~~~~~~~~~~-~d~v~ft 182 (248)
T COG1587 105 EDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREV-EVYRTEPPPLDEATLIELLKLGE-VDAVVFT 182 (248)
T ss_pred CccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEE-eeeeecCCCccHHHHHHHHHhCC-CCEEEEe
Confidence 3567778888887777667899988766544 566778889888876 443221 1223445555666554 6788876
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
++ ...+.+.+++.+.
T Consensus 183 S~----------~~v~~~~~~~~~~ 197 (248)
T COG1587 183 SS----------SAVRALLALAPES 197 (248)
T ss_pred CH----------HHHHHHHHHcccc
Confidence 43 2266666666543
No 473
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=43.92 E-value=2e+02 Score=24.42 Aligned_cols=91 Identities=21% Similarity=0.244 Sum_probs=52.2
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh-hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
++...|++..||..|...+ ..|++.|.+|.+..|....-. ...+..+ +..+ +..+ +.+.+.. +
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~~--i~~~----~~~~--~~~~~~~-------~ 73 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEGK--IKWI----EREF--DAEDLDD-------A 73 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhcC--cchh----hccc--ChhhhcC-------c
Confidence 4456788888887887754 456678889988888872222 2222222 2222 1112 3333222 2
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.+|++... +.+.=+++.+.|+++++++-
T Consensus 74 ~lviaAt~--------d~~ln~~i~~~a~~~~i~vN 101 (210)
T COG1648 74 FLVIAATD--------DEELNERIAKAARERRILVN 101 (210)
T ss_pred eEEEEeCC--------CHHHHHHHHHHHHHhCCcee
Confidence 55555422 23445889999999887653
No 474
>KOG4132 consensus Uroporphyrinogen III synthase UROS/HEM4 [Coenzyme transport and metabolism]
Probab=43.77 E-value=35 Score=29.02 Aligned_cols=50 Identities=18% Similarity=0.174 Sum_probs=38.5
Q ss_pred CCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
....|...++.+|++++++ |+-..++ .+++++.+.+++-.+...+++++|
T Consensus 15 ~~D~Y~~~l~~~~~epifI-P~l~f~f-~~l~~lr~kL~~p~kY~giIfTSp 64 (260)
T KOG4132|consen 15 PIDPYEEELRSYGLEPIFI-PVLSFTF-VNLQQLRAKLNNPPKYAGIIFTSP 64 (260)
T ss_pred CCCHHHHHHHhcCCCceee-cceeeee-ccHHHHHHHhcCchhhceeEEeCh
Confidence 4467889999999999999 7766654 689999999985444566776654
No 475
>PRK08265 short chain dehydrogenase; Provisional
Probab=43.38 E-value=2.2e+02 Score=24.71 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=47.6
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.+++..=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFI-ATDIT----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEE-EecCC----CHHHHHHHHHHHHHHhCC
Confidence 3456666655444455556677788888776544323333444445455555 44322 4555555443 2222
Q ss_pred CeEEEEeCCC-CCCccCCCHHHHHHHH
Q 015890 165 PKLVSVVNPG-NPSGTYIPERLLKRIS 190 (398)
Q Consensus 165 ~~~v~i~~p~-nptG~~~~~~~l~~i~ 190 (398)
++.++.+... .+.+...+.+++++..
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHH
Confidence 5666544322 1222234544554443
No 476
>PLN03244 alpha-amylase; Provisional
Probab=43.25 E-value=38 Score=34.82 Aligned_cols=35 Identities=23% Similarity=0.164 Sum_probs=29.1
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+..-|+...-++++++++++.|++.|+-||+|=|+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 33445555667899999999999999999999988
No 477
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=43.02 E-value=57 Score=31.42 Aligned_cols=76 Identities=11% Similarity=0.075 Sum_probs=45.2
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC-------CeEEE--E-eCC--CCCCccCCCHHHHHHHHHHHHH
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT-------PKLVS--V-VNP--GNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~-------~~~v~--i-~~p--~nptG~~~~~~~l~~i~~l~~~ 195 (398)
..+..+++++..++-.|..+|.+.++.+-++-+.+.. ...+. . ..+ ....+..++.+++++|++.|++
T Consensus 29 d~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~ 108 (445)
T cd06569 29 DQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKA 108 (445)
T ss_pred HHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHH
Confidence 4445667777777556777777765554433321100 00010 0 011 1234567899999999999999
Q ss_pred cCCEEEEe
Q 015890 196 AGSWLVVD 203 (398)
Q Consensus 196 ~~~~livD 203 (398)
+|+-||-.
T Consensus 109 rgI~VIPE 116 (445)
T cd06569 109 RHIEVIPE 116 (445)
T ss_pred cCCEEEEc
Confidence 99998843
No 478
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=43.00 E-value=52 Score=30.80 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=28.7
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
.++++++. +--|...+ .+.++++|++.|+++++|-
T Consensus 144 ~~~vVLSD--Y~KG~L~~---~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 144 FDALVLSD--YAKGVLTN---VQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred CCEEEEec--cccccchh---HHHHHHHHHHcCCcEEECC
Confidence 57888774 34677766 8999999999999999993
No 479
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=42.43 E-value=95 Score=27.60 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=33.5
Q ss_pred cCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
|.++++ .+|.+.+++.++ -...++.+++. .++--+..++.++.+++++.+.+.
T Consensus 8 Pf~~dg-~iD~~~~~~~i~~l~~~Gv~gi~~~-GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 8 PFTADG-EVDLDALRRLVEFLIEAGVDGLVVL-GTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CCCcccccCCHHHHHHHHHHHHHH
Confidence 445444 688888888776 11225676654 333345667888888888876543
No 480
>PRK05638 threonine synthase; Validated
Probab=42.28 E-value=2.3e+02 Score=27.26 Aligned_cols=119 Identities=17% Similarity=0.070 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHH-HhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVK-ELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~-~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
+.+++.+.++.-....+.+..|.+|+-..+ ..+... +.+-+... ..|+ |-..-|.+..... +-.....+.|+..
T Consensus 44 ~~~wry~~~lp~~~~~v~l~~G~TPLv~~~-~~~~~g~~l~~K~E~--~nPt-GSfKdR~a~~~i~-~a~~~g~~~vv~a 118 (442)
T PRK05638 44 PGVWRYKELLPQVKKIISLGEGGTPLIRAR-ISEKLGENVYIKDET--RNPT-GSFRDRLATVAVS-YGLPYAANGFIVA 118 (442)
T ss_pred CChhhhhhhCCCcCCccccCCCCCcEEccc-chHHhCCeEEEEeCC--CCCC-CChHHHHHHHHHH-HHHHcCCCEEEEe
Confidence 345666666654345577777777764332 211110 11111111 1122 2222232222111 0001124557777
Q ss_pred cChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhhHHHhcCcEEEEe
Q 015890 96 AGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 140 (398)
+++..+...+..+-. +-.-.|++|...-.......+.+|++++.+
T Consensus 119 SsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v 164 (442)
T PRK05638 119 SDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRY 164 (442)
T ss_pred CCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEE
Confidence 777777777666543 222355566544445567789999999988
No 481
>PRK12412 pyridoxal kinase; Reviewed
Probab=42.01 E-value=56 Score=28.88 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=34.6
Q ss_pred ChHHHHHh----hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE-EEEeece
Q 015890 151 DADWLEKT----LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW-LVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~----l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~-livDe~~ 206 (398)
+.+.+++. ++.-+ +++|. +|.+.+.+.++.+++++++++.. +++|-+.
T Consensus 56 ~~~~i~~q~~~l~~d~~-~~~ik-------iG~l~~~~~v~~i~~~~~~~~~~~vv~DPv~ 108 (268)
T PRK12412 56 PASTLKPQLETTIEGVG-VDALK-------TGMLGSVEIIEMVAETIEKHNFKNVVVDPVM 108 (268)
T ss_pred CHHHHHHHHHHHHhCCC-CCEEE-------ECCCCCHHHHHHHHHHHHhcCCCCEEECcCe
Confidence 44444444 44333 57776 68888999999999999998876 8888544
No 482
>PRK14974 cell division protein FtsY; Provisional
Probab=41.80 E-value=2.9e+02 Score=25.54 Aligned_cols=103 Identities=19% Similarity=0.111 Sum_probs=47.7
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeC-CCCc-Ch----hhHHHhcCcEEEEeccCCCCCCCCChHH-----HHHhhccCCC
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFA-PYYF-NS----YMSFQMTGVTHILVGPCSSKTLHPDADW-----LEKTLETKPT 164 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~-p~~~-~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~-----l~~~l~~~~~ 164 (398)
.|=|..+..+...+...|-+|++.. ..|. +. ...+...|+.+... . .+ .|+.. ++..-..+
T Consensus 151 vGKTTtiakLA~~l~~~g~~V~li~~Dt~R~~a~eqL~~~a~~lgv~v~~~-~---~g--~dp~~v~~~ai~~~~~~~-- 222 (336)
T PRK14974 151 TGKTTTIAKLAYYLKKNGFSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKH-K---YG--ADPAAVAYDAIEHAKARG-- 222 (336)
T ss_pred CCHHHHHHHHHHHHHHcCCeEEEecCCcCcHHHHHHHHHHHHHcCCceecc-c---CC--CCHHHHHHHHHHHHHhCC--
Confidence 4555566666666666676775543 3342 22 22344556554432 1 11 13322 22222222
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
..+|+|..+........-.++++.+.+.++...+++++|...
T Consensus 223 ~DvVLIDTaGr~~~~~~lm~eL~~i~~~~~pd~~iLVl~a~~ 264 (336)
T PRK14974 223 IDVVLIDTAGRMHTDANLMDELKKIVRVTKPDLVIFVGDALA 264 (336)
T ss_pred CCEEEEECCCccCCcHHHHHHHHHHHHhhCCceEEEeecccc
Confidence 478888865322211111223444444444556677777543
No 483
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=41.73 E-value=95 Score=24.22 Aligned_cols=57 Identities=23% Similarity=0.235 Sum_probs=40.1
Q ss_pred CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH-HHHHHHHHHHH-Hc-CCEEE-Eeece
Q 015890 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE-RLLKRISDLCK-AA-GSWLV-VDNTY 206 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~l~~-~~-~~~li-vDe~~ 206 (398)
..+.+.|.+.+++.. +..+++..|-|.-|..-+. +.+++.++..+ +. ++.++ +||.+
T Consensus 37 ~~~~~~l~~li~~~~-i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~ 97 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQ-IDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERL 97 (135)
T ss_dssp CCCHHHHHHHHHHCC-ECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSC
T ss_pred chHHHHHHHHHHHhC-CCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCCh
Confidence 458999999999776 7899999998887876443 33555555443 43 76655 88877
No 484
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=41.63 E-value=98 Score=22.73 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=32.6
Q ss_pred HHHHHHhcCeEEecCCCCCCCCeEEEEecC-C----CHHHHH-HHHHHHHHHHHHHhcc
Q 015890 335 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-L----VEDDCK-AAADRLRRGLEELVKD 387 (398)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~----~~~~~~-~~~~~l~~~~~~~~~~ 387 (398)
....++++||.+.|-......+.+...+-+ - +.+++. +..+.|.+.+.++.+.
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~~ 98 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIFET 98 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567999999997654444444333322 1 445444 7777788887776653
No 485
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=41.56 E-value=2e+02 Score=25.29 Aligned_cols=107 Identities=20% Similarity=0.233 Sum_probs=60.2
Q ss_pred HHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEE---eCCCCcC-----hhhHHHhcCcEEEEeccCCCC
Q 015890 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM---FAPYYFN-----SYMSFQMTGVTHILVGPCSSK 146 (398)
Q Consensus 75 ~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~---~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~ 146 (398)
+.+..+++... .-++..+||..+-.++..+.-.-|++|+. ..|.-+. ....++..|++...+ +++.-
T Consensus 8 ~~l~~~ik~~~----kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i-~~~~~ 82 (269)
T COG1606 8 ERLKKAIKEKK----KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFI-KMNRM 82 (269)
T ss_pred HHHHHHHhhcC----eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceee-ehhhc
Confidence 44555554322 34666677777766666554333565543 3333332 335677788876666 44321
Q ss_pred CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
++ + +..+|.|++ ...-..-...|.+.++++|.-+|+|.+-
T Consensus 83 ----~~----~-----------~~~n~~~rC-Y~CK~~v~~~l~~~a~~~Gyd~V~dGtN 122 (269)
T COG1606 83 ----DP----E-----------FKENPENRC-YLCKRAVYSTLVEEAEKRGYDVVADGTN 122 (269)
T ss_pred ----ch----h-----------hccCCCCcc-hHHHHHHHHHHHHHHHHcCCCEEEeCCc
Confidence 10 0 111233322 3334555788999999999999999765
No 486
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=41.48 E-value=36 Score=31.41 Aligned_cols=68 Identities=9% Similarity=0.175 Sum_probs=39.9
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+..+++++..++-.|..+|.+....+.+.-.... . .++.+ |..++.+++++|++.|+++|+-||-.
T Consensus 25 d~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga------~-~~~~~-~~~yT~~di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 25 DQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGA------Y-RPSDA-GGYYTKEDIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp HHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT------E-STTCT-ESEBEHHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHcCCcEEEEEEecCCCCccccCCCccccccCc------c-ccccc-cccCCHHHHHHHHHHHHHcCCceeee
Confidence 445566777776645566666655433333322110 0 00113 44899999999999999999998854
No 487
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=41.05 E-value=74 Score=31.60 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.+|+|-+.
T Consensus 73 t~~~~~~lv~~ah~~gi~vilD~v~ 97 (543)
T TIGR02403 73 TMADFEELVSEAKKRNIKIMLDMVF 97 (543)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5678999999999999999999777
No 488
>PRK15452 putative protease; Provisional
Probab=41.00 E-value=85 Score=30.20 Aligned_cols=30 Identities=17% Similarity=0.098 Sum_probs=19.3
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 356 GHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 356 ~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
..+||=....+.+.+...+..-.+++....
T Consensus 283 ~s~KIEgR~ks~~yv~~vv~~YR~ald~~~ 312 (443)
T PRK15452 283 HSLKIEGRTKSFYYVARTAQVYRKAIDDAV 312 (443)
T ss_pred CEEEEEeeeCCHHHHHHHHHHHHHHHHHHh
Confidence 346665444466777777777777776554
No 489
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=40.95 E-value=79 Score=31.45 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-+.
T Consensus 79 t~~d~~~lv~~~h~~gi~vilD~V~ 103 (551)
T PRK10933 79 TLDDFDELVAQAKSRGIRIILDMVF 103 (551)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999999999999999999887
No 490
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=40.61 E-value=1.3e+02 Score=26.90 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=33.5
Q ss_pred cCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
|.++++ .+|.+.+++.++. ...++.+++. .++--+..++.++..++.+.+.+
T Consensus 12 Pf~~dg-~iD~~~l~~~i~~l~~~Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~ 65 (292)
T PRK03170 12 PFKEDG-SVDFAALRKLVDYLIANGTDGLVVV-GTTGESPTLTHEEHEELIRAVVE 65 (292)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CcCCccccCCHHHHHHHHHHHHH
Confidence 555554 6888888887761 1225677764 33344567888888888876655
No 491
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=40.42 E-value=1e+02 Score=27.24 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=35.9
Q ss_pred CChHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEee
Q 015890 150 PDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDN 204 (398)
Q Consensus 150 ~d~e~l~~~l~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~livDe 204 (398)
+++|.++++++. .-.+.++= ||.+.+.+-++.+++..++++ ..+|+|-
T Consensus 55 v~~~~v~~Ql~av~~D~~v~avK-------tGML~~~eiie~va~~l~~~~~~~vV~DP 106 (263)
T COG0351 55 VPPEFVEAQLDAVFSDIPVDAVK-------TGMLGSAEIIEVVAEKLKKYGIGPVVLDP 106 (263)
T ss_pred CCHHHHHHHHHHHhhcCCCCEEE-------ECCcCCHHHHHHHHHHHHhcCCCcEEECc
Confidence 466777777651 22144443 899999999999999999999 7799994
No 492
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=40.19 E-value=1.4e+02 Score=26.73 Aligned_cols=53 Identities=9% Similarity=0.021 Sum_probs=35.0
Q ss_pred cCCCCCCCCChHHHHHhhcc--CCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 142 PCSSKTLHPDADWLEKTLET--KPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~--~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
|.++++ .+|.+.+++.++. ... +..|++. .++--+..++.++.+++.+.+.+.
T Consensus 11 Pf~~dg-~iD~~~~~~~i~~~i~~G~v~gi~~~-GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 11 SFNEDG-TINEKGLRQIIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCCC-CcCHHHHHHHHHHHHhCCCcCEEEEC-CcccccccCCHHHHHHHHHHHHHH
Confidence 566555 7899988888762 122 4666654 333445568888888888876653
No 493
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=39.97 E-value=32 Score=30.76 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-+.
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hhhhhhhhhhccccccceEEEeeec
Confidence 3678999999999999999999888
No 494
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=39.96 E-value=33 Score=33.40 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.+|+|-|.
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5778999999999999999999998
No 495
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=39.73 E-value=69 Score=28.16 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=32.4
Q ss_pred ChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-EEEEeec
Q 015890 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS-WLVVDNT 205 (398)
Q Consensus 151 d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~-~livDe~ 205 (398)
+.+.+.+.++ ++..+++|. +|.+.+.+.++.+.+++++++. ++++|-+
T Consensus 57 ~~~~~~~q~~~~~~~~~~~ai~-------iG~l~~~~~~~~i~~~~~~~~~~~vv~DPv 108 (266)
T PRK06427 57 PPEFVAAQLDAVFSDIRIDAVK-------IGMLASAEIIETVAEALKRYPIPPVVLDPV 108 (266)
T ss_pred CHHHHHHHHHHHHhcCCCCEEE-------ECCcCCHHHHHHHHHHHHhCCCCCEEEcCc
Confidence 4444444443 122367776 5677778889999999998875 7888944
No 496
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=39.27 E-value=2.1e+02 Score=24.37 Aligned_cols=58 Identities=5% Similarity=0.029 Sum_probs=40.4
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..++..|.+++.+ |-...++++.+.+.+.. +++|.++...+ .+.+.++++++..++.+
T Consensus 110 ~~l~~~G~~Vi~L------G~~vp~e~~v~~~~~~~-~~~V~lS~~~~-----~~~~~~~~~i~~L~~~~ 167 (213)
T cd02069 110 VILSNNGYEVIDL------GVMVPIEKILEAAKEHK-ADIIGLSGLLV-----PSLDEMVEVAEEMNRRG 167 (213)
T ss_pred HHHHhCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEccchh-----ccHHHHHHHHHHHHhcC
Confidence 5678899999987 33457888888887654 68888874433 23445777777777653
No 497
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=39.03 E-value=2.8e+02 Score=25.19 Aligned_cols=51 Identities=18% Similarity=0.067 Sum_probs=32.1
Q ss_pred CCcEEEecChHHHHHHHHHHhccCC--CEEEEeCCCCcChhhHHHhcCcEEEEe
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAG--DSVVMFAPYYFNSYMSFQMTGVTHILV 140 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~ 140 (398)
...|+..+++..+.-.+..+-. .| -.|+++...-..-...++.+|++++.+
T Consensus 70 ~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~ 122 (324)
T cd01563 70 VKAVACASTGNTSASLAAYAAR-AGIKCVVFLPAGKALGKLAQALAYGATVLAV 122 (324)
T ss_pred CCEEEEeCCCHHHHHHHHHHHH-cCCceEEEEeCCCCHHHHHHHHHcCCEEEEE
Confidence 3457777777777776654432 23 345555544334456788999999887
No 498
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=38.95 E-value=46 Score=33.01 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-+.++++++++.|+++|+.+|+|-++
T Consensus 157 G~~~e~k~lV~~aH~~Gi~VilD~V~ 182 (542)
T TIGR02402 157 GGPDDLKALVDAAHGLGLGVILDVVY 182 (542)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 35788999999999999999999988
No 499
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=38.81 E-value=2e+02 Score=28.20 Aligned_cols=67 Identities=12% Similarity=0.085 Sum_probs=43.6
Q ss_pred HHhcC-cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeece
Q 015890 130 FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTY 206 (398)
Q Consensus 130 ~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~~ 206 (398)
++..| .++..+ +.. ...++.+++.+.+.... |++|.++.. | .......++++.+++. ++.+|+=..|
T Consensus 32 L~~~G~~~V~ii-D~~--~~~~~~~~~~~~l~~~~-pdvVgis~~---t---~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 32 LLDAGYHDVTFL-DAM--TGPLTDEKLVERLRAHC-PDLVLITAI---T---PAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred HHhcCCcceEEe-ccc--ccCCCHHHHHHHHHhcC-cCEEEEecC---c---ccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 46677 576666 332 22356778888777543 688887632 2 2334467788877765 8889888877
No 500
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=38.79 E-value=2.8e+02 Score=24.51 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=53.7
Q ss_pred CcEEEecCh----HHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 90 SSVMVTAGA----NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 90 ~~v~~~~g~----t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
-.+++..|+ -+++...+.++.-.-+-|-+..+. .....+...+.++... +.++ ..+.+++.+.. .
T Consensus 25 G~vliiaGs~~~~GA~ila~l~~~~~g~~~v~~~~~~--~~~~~i~~~~pe~~~~-~~~~-----~~~~~~~~~~~---~ 93 (272)
T TIGR00196 25 GRVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPE--NVITLINSVSPELIVH-RLGW-----KVDEDEELLER---Y 93 (272)
T ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEEch--hhHHHHhhcCCEEEEe-cchh-----hHHHHHhhhcc---C
Confidence 345555443 356666666664322444333332 2233455666666655 3321 34555555532 3
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
+++++. +.-|+ .+.+.++++.+++++.++|+|.
T Consensus 94 davvig-~Gl~~-----~~~~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 94 DVVVIG-PGLGQ-----DPSFKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred CEEEEc-CCCCC-----CHHHHHHHHHHHhcCCCEEEEh
Confidence 666663 32222 2337888888888999999994
Done!