Query 015890
Match_columns 398
No_of_seqs 159 out of 2182
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 04:18:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 1E-49 3.5E-54 373.8 37.8 366 7-382 4-383 (385)
2 1gd9_A Aspartate aminotransfer 100.0 4.8E-48 1.6E-52 363.1 39.8 371 5-384 1-386 (389)
3 1j32_A Aspartate aminotransfer 100.0 3.4E-48 1.2E-52 364.0 37.4 372 5-384 1-387 (388)
4 3jtx_A Aminotransferase; NP_28 100.0 1E-47 3.5E-52 361.7 38.9 360 8-381 3-395 (396)
5 2o1b_A Aminotransferase, class 100.0 9.4E-49 3.2E-53 369.5 31.6 371 3-383 19-402 (404)
6 3h14_A Aminotransferase, class 100.0 8E-48 2.7E-52 361.8 37.6 356 19-386 20-384 (391)
7 2x5d_A Probable aminotransfera 100.0 1.1E-47 3.7E-52 363.3 37.2 373 5-385 8-399 (412)
8 1u08_A Hypothetical aminotrans 100.0 2.3E-47 7.7E-52 358.1 36.9 368 2-379 3-385 (386)
9 3aow_A Putative uncharacterize 100.0 3E-47 1E-51 363.3 36.8 370 7-386 54-447 (448)
10 3fvs_A Kynurenine--oxoglutarat 100.0 1.3E-47 4.4E-52 364.0 33.8 370 5-383 4-421 (422)
11 3b46_A Aminotransferase BNA3; 100.0 1.7E-47 5.8E-52 365.5 34.6 358 14-379 33-442 (447)
12 3ele_A Amino transferase; RER0 100.0 4.3E-47 1.5E-51 357.7 36.1 368 5-385 2-397 (398)
13 2o0r_A RV0858C (N-succinyldiam 100.0 3.1E-47 1.1E-51 360.1 32.0 371 5-385 1-397 (411)
14 2dou_A Probable N-succinyldiam 100.0 9.7E-47 3.3E-51 352.6 34.3 343 27-381 22-375 (376)
15 3fdb_A Beta C-S lyase, putativ 100.0 3.9E-47 1.3E-51 355.3 31.4 347 24-383 17-375 (377)
16 1o4s_A Aspartate aminotransfer 100.0 3.3E-46 1.1E-50 350.5 37.8 361 7-382 14-387 (389)
17 3nra_A Aspartate aminotransfer 100.0 9.9E-47 3.4E-51 356.2 34.0 348 31-385 40-406 (407)
18 1xi9_A Putative transaminase; 100.0 1.3E-46 4.4E-51 355.3 34.3 370 7-385 12-404 (406)
19 1yiz_A Kynurenine aminotransfe 100.0 1.7E-46 5.7E-51 357.1 34.9 366 7-381 15-426 (429)
20 3dzz_A Putative pyridoxal 5'-p 100.0 2.5E-46 8.7E-51 351.5 34.3 352 25-384 22-389 (391)
21 1v2d_A Glutamine aminotransfer 100.0 3.2E-46 1.1E-50 349.7 33.5 360 5-386 1-373 (381)
22 3kax_A Aminotransferase, class 100.0 1E-45 3.5E-50 346.5 36.9 345 28-381 22-382 (383)
23 2z61_A Probable aspartate amin 100.0 1.3E-45 4.6E-50 344.1 36.1 352 8-382 3-369 (370)
24 3e2y_A Kynurenine-oxoglutarate 100.0 3.4E-46 1.2E-50 352.9 32.3 362 9-379 3-408 (410)
25 2gb3_A Aspartate aminotransfer 100.0 4.4E-45 1.5E-49 345.1 38.7 367 7-386 16-404 (409)
26 1c7n_A Cystalysin; transferase 100.0 1.3E-45 4.4E-50 347.7 34.6 349 30-386 31-395 (399)
27 3ezs_A Aminotransferase ASPB; 100.0 2.3E-45 7.9E-50 343.2 34.9 333 28-383 22-374 (376)
28 3dyd_A Tyrosine aminotransfera 100.0 2.1E-45 7.2E-50 349.0 34.6 362 19-385 39-425 (427)
29 2zc0_A Alanine glyoxylate tran 100.0 1.1E-44 3.7E-49 342.3 37.6 370 7-385 7-405 (407)
30 4dq6_A Putative pyridoxal phos 100.0 1.2E-44 4.2E-49 340.0 37.5 344 28-381 30-390 (391)
31 1d2f_A MALY protein; aminotran 100.0 7.8E-45 2.7E-49 341.3 35.6 346 30-384 28-389 (390)
32 3l8a_A METC, putative aminotra 100.0 2.2E-45 7.5E-50 348.4 30.5 345 29-382 60-420 (421)
33 1vp4_A Aminotransferase, putat 100.0 1.6E-45 5.4E-50 349.8 29.5 371 7-387 21-421 (425)
34 3g0t_A Putative aminotransfera 100.0 2.6E-45 8.8E-50 349.8 30.9 347 27-383 41-436 (437)
35 2r2n_A Kynurenine/alpha-aminoa 100.0 8.9E-45 3E-49 344.6 32.8 364 7-384 7-424 (425)
36 2zyj_A Alpha-aminodipate amino 100.0 1.7E-44 5.8E-49 339.8 33.2 364 7-385 10-394 (397)
37 1bw0_A TAT, protein (tyrosine 100.0 4.6E-44 1.6E-48 338.9 35.7 352 29-385 32-414 (416)
38 3ly1_A Putative histidinol-pho 100.0 5.3E-44 1.8E-48 331.3 33.1 332 27-383 13-351 (354)
39 3ffh_A Histidinol-phosphate am 100.0 1.1E-43 3.8E-48 330.2 35.3 327 28-380 30-362 (363)
40 3get_A Histidinol-phosphate am 100.0 1.6E-43 5.3E-48 329.5 35.0 328 28-381 28-364 (365)
41 2x5f_A Aspartate_tyrosine_phen 100.0 2.2E-44 7.4E-49 342.6 29.4 344 29-384 46-429 (430)
42 3euc_A Histidinol-phosphate am 100.0 1.9E-43 6.7E-48 329.1 34.7 329 29-381 29-365 (367)
43 3k7y_A Aspartate aminotransfer 100.0 6.2E-44 2.1E-48 334.4 30.6 356 8-383 5-404 (405)
44 3qgu_A LL-diaminopimelate amin 100.0 7.2E-44 2.5E-48 340.9 31.7 340 28-383 67-439 (449)
45 3tcm_A Alanine aminotransferas 100.0 8E-43 2.7E-47 337.0 38.3 338 44-387 107-497 (500)
46 3ei9_A LL-diaminopimelate amin 100.0 2.2E-43 7.4E-48 335.9 33.9 338 28-381 54-425 (432)
47 3d6k_A Putative aminotransfera 100.0 6.8E-44 2.3E-48 338.2 28.3 363 8-386 11-420 (422)
48 1fg7_A Histidinol phosphate am 100.0 8.5E-43 2.9E-47 323.3 32.9 317 30-379 29-353 (356)
49 3ihj_A Alanine aminotransferas 100.0 8.9E-43 3.1E-47 336.1 34.1 366 16-387 41-496 (498)
50 4f4e_A Aromatic-amino-acid ami 100.0 7.2E-43 2.4E-47 331.0 32.7 360 5-381 22-419 (420)
51 3op7_A Aminotransferase class 100.0 2.9E-43 1E-47 328.9 29.3 323 51-385 47-372 (375)
52 3rq1_A Aminotransferase class 100.0 9.2E-43 3.1E-47 330.2 32.4 340 29-385 37-416 (418)
53 1iay_A ACC synthase 2, 1-amino 100.0 1.3E-42 4.5E-47 330.1 33.2 347 30-383 36-426 (428)
54 3ftb_A Histidinol-phosphate am 100.0 3.7E-42 1.3E-46 319.7 35.3 328 27-382 23-359 (361)
55 1lc5_A COBD, L-threonine-O-3-p 100.0 3.6E-42 1.2E-46 320.1 34.9 331 28-384 22-360 (364)
56 3asa_A LL-diaminopimelate amin 100.0 8.2E-43 2.8E-47 328.6 29.3 339 28-385 31-394 (400)
57 3piu_A 1-aminocyclopropane-1-c 100.0 5.6E-42 1.9E-46 326.5 33.9 349 30-385 38-433 (435)
58 3t18_A Aminotransferase class 100.0 5.6E-42 1.9E-46 324.3 31.8 337 29-386 36-412 (413)
59 1yaa_A Aspartate aminotransfer 100.0 5E-42 1.7E-46 324.6 30.8 359 7-383 4-410 (412)
60 3hdo_A Histidinol-phosphate am 100.0 4.7E-41 1.6E-45 312.2 35.6 326 28-382 24-353 (360)
61 3ppl_A Aspartate aminotransfer 100.0 4.9E-42 1.7E-46 326.0 29.0 353 17-385 21-421 (427)
62 3g7q_A Valine-pyruvate aminotr 100.0 7.8E-42 2.7E-46 323.7 30.3 349 28-387 29-416 (417)
63 3ez1_A Aminotransferase MOCR f 100.0 5.3E-42 1.8E-46 325.5 27.9 356 16-386 12-417 (423)
64 3p1t_A Putative histidinol-pho 100.0 9.9E-41 3.4E-45 307.1 35.2 320 27-381 13-334 (337)
65 3b1d_A Betac-S lyase; HET: PLP 100.0 6.6E-46 2.3E-50 348.8 0.0 351 24-382 23-391 (392)
66 1ajs_A Aspartate aminotransfer 100.0 3E-41 1E-45 319.2 31.7 358 9-384 7-411 (412)
67 3fsl_A Aromatic-amino-acid ami 100.0 2.5E-41 8.6E-46 318.2 30.5 351 15-380 9-396 (397)
68 3if2_A Aminotransferase; YP_26 100.0 2.8E-41 9.5E-46 322.6 31.1 350 28-386 29-442 (444)
69 7aat_A Aspartate aminotransfer 100.0 3.4E-41 1.2E-45 317.7 30.8 337 30-381 28-400 (401)
70 3f6t_A Aspartate aminotransfer 100.0 7.1E-42 2.4E-46 332.3 25.4 346 31-387 104-528 (533)
71 3fkd_A L-threonine-O-3-phospha 100.0 4.8E-41 1.7E-45 310.9 29.3 322 28-383 13-341 (350)
72 3meb_A Aspartate aminotransfer 100.0 6.1E-41 2.1E-45 320.0 30.6 359 6-383 23-443 (448)
73 2q7w_A Aspartate aminotransfer 100.0 3.4E-41 1.2E-45 317.2 27.2 336 28-380 24-395 (396)
74 4eu1_A Mitochondrial aspartate 100.0 8.5E-41 2.9E-45 315.8 28.8 357 7-381 16-408 (409)
75 3cq5_A Histidinol-phosphate am 100.0 1.2E-39 4E-44 303.7 35.3 326 32-382 32-366 (369)
76 2zy4_A L-aspartate beta-decarb 100.0 1.2E-40 4.1E-45 323.6 28.4 345 32-387 106-525 (546)
77 2ay1_A Aroat, aromatic amino a 100.0 2.3E-40 7.8E-45 311.3 27.8 350 13-380 7-392 (394)
78 1uu1_A Histidinol-phosphate am 100.0 1.3E-39 4.6E-44 299.3 28.7 314 30-380 19-334 (335)
79 3bwn_A AT1G70560, L-tryptophan 100.0 1.4E-40 4.7E-45 312.0 19.3 327 28-383 20-386 (391)
80 4h51_A Aspartate aminotransfer 100.0 5E-38 1.7E-42 294.3 32.9 366 5-386 15-419 (420)
81 2hox_A ALLIIN lyase 1; cystein 100.0 7.1E-40 2.4E-44 310.1 19.6 326 30-382 56-423 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 8.5E-38 2.9E-42 294.2 29.2 334 28-384 41-392 (398)
83 1vjo_A Alanine--glyoxylate ami 100.0 8.1E-37 2.8E-41 287.0 28.1 321 40-381 41-392 (393)
84 2dr1_A PH1308 protein, 386AA l 100.0 8.2E-36 2.8E-40 279.4 32.4 325 41-385 28-380 (386)
85 1t3i_A Probable cysteine desul 100.0 3.6E-36 1.2E-40 285.0 26.6 335 30-386 27-415 (420)
86 1kmj_A Selenocysteine lyase; p 100.0 4.2E-36 1.4E-40 283.2 24.3 333 29-384 21-405 (406)
87 1eg5_A Aminotransferase; PLP-d 100.0 6.4E-36 2.2E-40 279.9 24.1 332 33-387 3-379 (384)
88 3tqx_A 2-amino-3-ketobutyrate 100.0 2.8E-35 9.7E-40 277.0 25.4 332 28-384 41-396 (399)
89 2z9v_A Aspartate aminotransfer 100.0 1E-34 3.6E-39 272.5 28.3 335 31-386 8-373 (392)
90 2huf_A Alanine glyoxylate amin 100.0 8.2E-35 2.8E-39 273.3 27.5 337 23-386 12-385 (393)
91 3f9t_A TDC, L-tyrosine decarbo 100.0 2.6E-34 8.9E-39 270.0 30.8 320 40-382 38-396 (397)
92 1iug_A Putative aspartate amin 100.0 6.1E-35 2.1E-39 270.0 26.0 321 40-385 8-349 (352)
93 2ch1_A 3-hydroxykynurenine tra 100.0 7.3E-35 2.5E-39 273.9 26.3 330 35-387 20-386 (396)
94 3zrp_A Serine-pyruvate aminotr 100.0 2.8E-34 9.7E-39 268.6 29.4 326 39-388 8-367 (384)
95 3nnk_A Ureidoglycine-glyoxylat 100.0 4E-34 1.4E-38 270.2 30.7 327 40-387 20-393 (411)
96 1bs0_A Protein (8-amino-7-oxon 100.0 1.3E-34 4.4E-39 271.1 26.5 327 28-380 37-383 (384)
97 2w8t_A SPT, serine palmitoyltr 100.0 1.6E-34 5.4E-39 274.2 27.1 341 28-390 62-421 (427)
98 3lvm_A Cysteine desulfurase; s 100.0 1.9E-34 6.4E-39 273.5 26.7 341 27-387 18-402 (423)
99 4eb5_A Probable cysteine desul 100.0 1.2E-34 4.2E-39 271.0 25.0 324 43-386 11-375 (382)
100 3ruy_A Ornithine aminotransfer 100.0 6.3E-35 2.1E-39 274.1 22.6 325 27-381 33-391 (392)
101 3i4j_A Aminotransferase, class 100.0 1.6E-34 5.6E-39 274.5 25.7 348 27-384 26-428 (430)
102 1m32_A 2-aminoethylphosphonate 100.0 1.9E-34 6.5E-39 268.0 25.2 331 31-383 4-364 (366)
103 1sff_A 4-aminobutyrate aminotr 100.0 3E-35 1E-39 279.3 20.0 341 28-384 39-424 (426)
104 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 8.3E-36 2.8E-40 277.9 15.8 329 29-384 6-370 (371)
105 3kgw_A Alanine-glyoxylate amin 100.0 5.2E-34 1.8E-38 267.7 28.2 328 38-386 28-390 (393)
106 1e5e_A MGL, methionine gamma-l 100.0 1E-33 3.5E-38 266.3 30.0 324 24-386 11-397 (404)
107 1svv_A Threonine aldolase; str 100.0 3.4E-34 1.2E-38 265.6 26.4 332 28-384 11-358 (359)
108 3cai_A Possible aminotransfera 100.0 4.7E-34 1.6E-38 269.3 27.5 327 31-379 26-404 (406)
109 1fc4_A 2-amino-3-ketobutyrate 100.0 1.8E-34 6E-39 271.8 24.5 329 28-384 43-397 (401)
110 2bwn_A 5-aminolevulinate synth 100.0 2.5E-34 8.6E-39 270.8 25.1 331 28-383 44-399 (401)
111 3isl_A Purine catabolism prote 100.0 2.3E-33 7.9E-38 265.4 31.3 325 41-386 19-392 (416)
112 2dkj_A Serine hydroxymethyltra 100.0 9.4E-34 3.2E-38 267.3 27.8 350 16-383 9-387 (407)
113 1elu_A L-cysteine/L-cystine C- 100.0 7E-35 2.4E-39 273.4 19.6 328 30-379 15-387 (390)
114 3nx3_A Acoat, acetylornithine 100.0 1.4E-33 4.7E-38 265.2 28.4 332 27-383 33-394 (395)
115 4hvk_A Probable cysteine desul 100.0 2.1E-33 7.1E-38 262.4 27.9 325 43-387 11-376 (382)
116 4a6r_A Omega transaminase; tra 100.0 1.5E-33 5.3E-38 269.7 27.5 345 28-386 48-451 (459)
117 3gju_A Putative aminotransfera 100.0 2.4E-33 8.1E-38 268.5 28.7 348 28-386 49-458 (460)
118 1jg8_A L-ALLO-threonine aldola 100.0 1.2E-33 4E-38 260.9 25.0 324 30-383 3-345 (347)
119 4adb_A Succinylornithine trans 100.0 1.3E-33 4.5E-38 266.3 25.6 332 27-387 36-403 (406)
120 2eo5_A 419AA long hypothetical 100.0 1.1E-33 3.9E-38 267.6 25.0 335 27-384 39-418 (419)
121 2yrr_A Aminotransferase, class 100.0 5.7E-34 1.9E-38 263.5 22.3 318 40-382 7-351 (353)
122 1v72_A Aldolase; PLP-dependent 100.0 7.7E-33 2.6E-37 256.3 28.7 330 29-385 6-354 (356)
123 2aeu_A Hypothetical protein MJ 100.0 1.3E-32 4.3E-37 256.2 29.9 336 18-386 14-373 (374)
124 2eh6_A Acoat, acetylornithine 100.0 1.3E-33 4.6E-38 263.4 22.6 318 28-380 26-374 (375)
125 3dxv_A Alpha-amino-epsilon-cap 100.0 1.4E-33 4.7E-38 268.9 23.0 348 27-386 40-427 (439)
126 4ffc_A 4-aminobutyrate aminotr 100.0 4.9E-34 1.7E-38 272.5 19.8 346 28-386 62-451 (453)
127 2ord_A Acoat, acetylornithine 100.0 6.7E-34 2.3E-38 267.5 20.1 327 27-383 37-396 (397)
128 3kki_A CAI-1 autoinducer synth 100.0 8.6E-33 3E-37 260.9 27.3 327 28-383 57-403 (409)
129 1s0a_A Adenosylmethionine-8-am 100.0 8.7E-33 3E-37 262.5 26.9 341 27-384 40-424 (429)
130 1zod_A DGD, 2,2-dialkylglycine 100.0 2.6E-33 8.9E-38 266.5 23.0 346 27-384 40-432 (433)
131 2pb2_A Acetylornithine/succiny 100.0 5.4E-33 1.8E-37 262.9 24.9 329 28-385 55-419 (420)
132 3n5m_A Adenosylmethionine-8-am 100.0 1.1E-32 3.9E-37 263.4 27.1 345 27-383 46-451 (452)
133 3f0h_A Aminotransferase; RER07 100.0 1.2E-32 4.1E-37 257.0 25.8 328 31-383 19-373 (376)
134 3dod_A Adenosylmethionine-8-am 100.0 1.5E-32 5.1E-37 262.2 25.7 343 27-386 41-445 (448)
135 3vax_A Putative uncharacterize 100.0 6.5E-34 2.2E-38 267.8 15.6 335 29-383 18-399 (400)
136 1vef_A Acetylornithine/acetyl- 100.0 7.9E-33 2.7E-37 260.0 22.9 333 28-381 43-394 (395)
137 1b9h_A AHBA synthase, protein 100.0 9.1E-32 3.1E-36 252.1 29.6 321 37-383 4-387 (388)
138 3ffr_A Phosphoserine aminotran 100.0 3.8E-32 1.3E-36 252.1 26.6 325 31-381 4-361 (362)
139 1z7d_A Ornithine aminotransfer 100.0 5.3E-32 1.8E-36 257.0 27.6 333 28-385 63-430 (433)
140 2bkw_A Alanine-glyoxylate amin 100.0 2.1E-32 7.2E-37 256.1 24.1 329 30-383 4-383 (385)
141 3hmu_A Aminotransferase, class 100.0 2E-32 6.8E-37 262.1 24.2 346 27-386 52-454 (472)
142 3a9z_A Selenocysteine lyase; P 100.0 2.6E-32 8.8E-37 259.5 24.0 333 30-386 17-430 (432)
143 3l44_A Glutamate-1-semialdehyd 100.0 2.1E-32 7.3E-37 260.2 23.2 341 27-386 52-432 (434)
144 1rv3_A Serine hydroxymethyltra 100.0 7.8E-32 2.7E-36 258.9 27.3 360 8-383 22-430 (483)
145 2oga_A Transaminase; PLP-depen 100.0 3.2E-32 1.1E-36 256.1 24.1 324 30-384 30-396 (399)
146 3i5t_A Aminotransferase; pyrid 100.0 5.3E-32 1.8E-36 259.6 25.2 345 27-387 51-457 (476)
147 3oks_A 4-aminobutyrate transam 100.0 4.9E-32 1.7E-36 258.6 24.2 344 28-383 59-450 (451)
148 2oat_A Ornithine aminotransfer 100.0 1.2E-31 4.3E-36 254.8 26.8 329 28-383 74-438 (439)
149 3tfu_A Adenosylmethionine-8-am 100.0 4.8E-32 1.6E-36 258.6 23.5 341 28-385 71-454 (457)
150 2rfv_A Methionine gamma-lyase; 100.0 1.9E-31 6.5E-36 250.7 26.7 316 33-378 23-394 (398)
151 3a8u_X Omega-amino acid--pyruv 100.0 1.3E-31 4.5E-36 255.9 23.8 338 28-384 48-447 (449)
152 2po3_A 4-dehydrase; external a 100.0 3.2E-30 1.1E-34 244.4 32.7 329 28-385 12-387 (424)
153 3n0l_A Serine hydroxymethyltra 100.0 1.4E-30 4.7E-35 246.5 30.0 354 12-384 7-389 (417)
154 2ez2_A Beta-tyrosinase, tyrosi 100.0 7.5E-31 2.6E-35 251.2 28.3 334 29-385 41-432 (456)
155 3k28_A Glutamate-1-semialdehyd 100.0 8.5E-32 2.9E-36 255.6 20.0 336 27-384 50-427 (429)
156 2dgk_A GAD-beta, GADB, glutama 100.0 6.1E-30 2.1E-34 244.4 32.3 356 17-387 27-437 (452)
157 1ax4_A Tryptophanase; tryptoph 100.0 5.9E-31 2E-35 252.7 25.1 324 46-385 55-442 (467)
158 3mc6_A Sphingosine-1-phosphate 100.0 2E-30 6.7E-35 250.9 28.7 326 44-387 76-440 (497)
159 1ibj_A CBL, cystathionine beta 100.0 2E-31 6.7E-36 253.8 20.9 327 30-383 89-461 (464)
160 1mdo_A ARNB aminotransferase; 100.0 3.2E-30 1.1E-34 242.1 28.1 319 31-385 9-387 (393)
161 3ecd_A Serine hydroxymethyltra 100.0 9.3E-30 3.2E-34 241.3 31.3 359 8-384 10-397 (425)
162 2c81_A Glutamine-2-deoxy-scyll 100.0 1.5E-29 5.2E-34 239.3 31.8 326 37-384 6-414 (418)
163 3fq8_A Glutamate-1-semialdehyd 100.0 2E-30 6.9E-35 246.1 25.7 332 27-383 49-426 (427)
164 1qz9_A Kynureninase; kynurenin 100.0 1.4E-30 4.8E-35 246.3 24.4 329 26-385 23-403 (416)
165 3h7f_A Serine hydroxymethyltra 100.0 7.8E-30 2.7E-34 243.1 29.6 358 9-384 24-414 (447)
166 2c0r_A PSAT, phosphoserine ami 100.0 6.3E-31 2.2E-35 244.1 20.6 322 32-383 5-360 (362)
167 3pj0_A LMO0305 protein; struct 100.0 4.6E-31 1.6E-35 244.7 18.7 328 28-380 11-358 (359)
168 1w23_A Phosphoserine aminotran 100.0 2.8E-31 9.5E-36 246.3 17.2 324 31-383 3-359 (360)
169 2vi8_A Serine hydroxymethyltra 100.0 4.6E-30 1.6E-34 241.9 25.4 336 29-385 23-388 (405)
170 1wyu_B Glycine dehydrogenase s 100.0 7.3E-30 2.5E-34 245.0 25.9 346 17-383 49-440 (474)
171 3mad_A Sphingosine-1-phosphate 100.0 1.7E-29 5.8E-34 245.1 28.5 310 61-388 128-473 (514)
172 2fnu_A Aminotransferase; prote 100.0 3.4E-29 1.2E-33 233.4 29.5 312 43-384 10-372 (375)
173 3lws_A Aromatic amino acid bet 100.0 2.7E-30 9.3E-35 239.3 20.8 313 45-381 23-356 (357)
174 2cy8_A D-phgat, D-phenylglycin 100.0 4.5E-30 1.5E-34 245.5 22.4 330 28-388 55-439 (453)
175 2cjg_A L-lysine-epsilon aminot 100.0 9.9E-31 3.4E-35 249.4 17.6 337 27-384 51-448 (449)
176 2epj_A Glutamate-1-semialdehyd 100.0 3.4E-30 1.2E-34 245.0 21.0 332 27-385 53-432 (434)
177 3uwc_A Nucleotide-sugar aminot 100.0 9.9E-30 3.4E-34 237.1 23.4 321 30-383 6-370 (374)
178 3ndn_A O-succinylhomoserine su 100.0 4.7E-29 1.6E-33 234.5 27.4 283 71-381 80-413 (414)
179 3gbx_A Serine hydroxymethyltra 100.0 1.4E-29 4.7E-34 239.8 23.7 337 31-384 31-396 (420)
180 4e77_A Glutamate-1-semialdehyd 100.0 2.2E-29 7.6E-34 239.0 24.4 337 27-383 50-428 (429)
181 3hbx_A GAD 1, glutamate decarb 100.0 2.2E-28 7.4E-33 235.9 30.4 348 28-387 53-447 (502)
182 3e9k_A Kynureninase; kynurenin 100.0 5.7E-30 2E-34 245.6 18.4 336 30-383 66-460 (465)
183 3qhx_A Cystathionine gamma-syn 100.0 1.7E-28 5.8E-33 229.7 27.9 281 70-381 68-391 (392)
184 3dr4_A Putative perosamine syn 100.0 1.6E-28 5.4E-33 230.3 27.6 319 30-381 22-390 (391)
185 2e7u_A Glutamate-1-semialdehyd 100.0 1.4E-29 4.9E-34 240.0 19.9 326 27-380 49-423 (424)
186 1cs1_A CGS, protein (cystathio 100.0 4.9E-28 1.7E-32 226.5 30.0 286 66-385 50-384 (386)
187 1gc0_A Methionine gamma-lyase; 100.0 2.3E-28 7.9E-33 229.6 27.6 280 68-379 65-396 (398)
188 1pff_A Methionine gamma-lyase; 100.0 2.1E-28 7.1E-33 224.3 24.7 275 72-379 2-329 (331)
189 1qgn_A Protein (cystathionine 100.0 1.7E-28 6E-33 231.7 24.8 283 70-383 116-444 (445)
190 2a7v_A Serine hydroxymethyltra 100.0 4.5E-28 1.5E-32 230.6 27.6 361 10-384 34-441 (490)
191 3nyt_A Aminotransferase WBPE; 100.0 1E-28 3.6E-33 229.5 22.6 302 44-379 14-359 (367)
192 3ke3_A Putative serine-pyruvat 100.0 4.8E-29 1.7E-33 232.7 20.3 324 44-385 9-377 (379)
193 3acz_A Methionine gamma-lyase; 100.0 1.2E-27 4.2E-32 223.8 28.9 281 67-382 58-387 (389)
194 3frk_A QDTB; aminotransferase, 100.0 1.7E-28 5.7E-33 228.7 22.5 308 44-383 15-367 (373)
195 2cb1_A O-acetyl homoserine sul 100.0 5.5E-27 1.9E-31 221.1 32.2 301 42-378 32-410 (412)
196 2fyf_A PSAT, phosphoserine ami 100.0 3.1E-28 1E-32 228.9 23.4 325 30-383 39-397 (398)
197 3ju7_A Putative PLP-dependent 100.0 1.1E-27 3.8E-32 222.9 26.1 324 35-383 5-374 (377)
198 2oqx_A Tryptophanase; lyase, p 100.0 1.1E-28 3.6E-33 237.0 18.9 324 46-385 53-443 (467)
199 3cog_A Cystathionine gamma-lya 100.0 1.2E-27 4.1E-32 224.6 25.4 286 66-386 65-400 (403)
200 2qma_A Diaminobutyrate-pyruvat 100.0 1.8E-27 6.1E-32 229.9 25.6 331 43-384 111-496 (497)
201 1n8p_A Cystathionine gamma-lya 100.0 1.6E-27 5.4E-32 223.1 23.4 281 68-379 55-390 (393)
202 2z67_A O-phosphoseryl-tRNA(SEC 100.0 1.6E-27 5.5E-32 227.6 23.6 347 18-381 67-455 (456)
203 1js3_A DDC;, DOPA decarboxylas 100.0 1.4E-27 4.9E-32 230.1 23.3 334 45-390 87-480 (486)
204 1o69_A Aminotransferase; struc 100.0 2E-26 6.8E-31 216.2 30.1 309 44-382 10-385 (394)
205 2okj_A Glutamate decarboxylase 100.0 2E-26 6.7E-31 223.0 30.8 329 45-384 105-502 (504)
206 1ohv_A 4-aminobutyrate aminotr 100.0 1.3E-27 4.5E-32 228.8 18.8 337 27-383 60-470 (472)
207 3vp6_A Glutamate decarboxylase 100.0 4.3E-26 1.5E-30 220.3 29.3 327 45-384 108-505 (511)
208 4e1o_A HDC, histidine decarbox 100.0 1.7E-26 5.9E-31 221.7 25.6 329 45-386 91-480 (481)
209 2yky_A Beta-transaminase; tran 99.9 4.1E-30 1.4E-34 243.3 0.0 330 27-385 97-461 (465)
210 3bb8_A CDP-4-keto-6-deoxy-D-gl 100.0 7.3E-26 2.5E-30 215.2 29.2 321 29-382 30-434 (437)
211 2fq6_A Cystathionine beta-lyas 100.0 2.6E-26 9E-31 215.5 24.8 211 69-307 83-301 (415)
212 3ri6_A O-acetylhomoserine sulf 99.9 2.2E-26 7.7E-31 216.7 23.6 284 68-381 82-429 (430)
213 3k40_A Aromatic-L-amino-acid d 99.9 2.6E-26 8.8E-31 219.9 24.1 330 45-386 86-473 (475)
214 3nmy_A Xometc, cystathionine g 99.9 8.8E-26 3E-30 211.2 26.2 279 73-382 68-397 (400)
215 1wyu_A Glycine dehydrogenase ( 99.9 8.4E-26 2.9E-30 214.8 24.6 320 34-381 68-437 (438)
216 2jis_A Cysteine sulfinic acid 99.9 6.1E-25 2.1E-29 213.0 29.3 329 44-383 120-514 (515)
217 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.3E-24 7.7E-29 202.0 30.9 316 32-377 3-389 (390)
218 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1E-25 3.5E-30 214.2 17.7 283 74-384 59-353 (446)
219 2ctz_A O-acetyl-L-homoserine s 99.9 1.8E-24 6.2E-29 204.3 21.6 281 70-381 60-420 (421)
220 4ao9_A Beta-phenylalanine amin 99.9 4.9E-24 1.7E-28 200.3 24.2 333 27-385 84-447 (454)
221 3e77_A Phosphoserine aminotran 99.9 3.2E-24 1.1E-28 197.4 20.5 323 40-383 20-374 (377)
222 3m5u_A Phosphoserine aminotran 99.9 1.3E-23 4.5E-28 192.7 23.2 323 30-383 4-359 (361)
223 4atq_A 4-aminobutyrate transam 99.9 2E-23 6.9E-28 197.1 24.7 346 27-384 61-455 (456)
224 1c4k_A Protein (ornithine deca 99.9 8.1E-23 2.8E-27 202.9 28.3 303 67-386 172-568 (730)
225 3qm2_A Phosphoserine aminotran 99.9 3.1E-24 1.1E-28 198.6 17.0 317 41-383 35-384 (386)
226 3jzl_A Putative cystathionine 99.9 2.3E-23 8E-28 194.6 22.5 271 45-342 31-338 (409)
227 4e3q_A Pyruvate transaminase; 99.9 1.8E-22 6.2E-27 191.2 28.1 345 27-386 64-470 (473)
228 3i16_A Aluminum resistance pro 99.9 3.5E-23 1.2E-27 194.0 22.5 270 46-339 46-353 (427)
229 3hvy_A Cystathionine beta-lyas 99.9 1.2E-22 4.1E-27 190.3 23.6 269 46-339 47-353 (427)
230 2vyc_A Biodegradative arginine 99.9 1E-22 3.5E-27 204.0 24.0 298 71-385 208-606 (755)
231 3ht4_A Aluminum resistance pro 99.9 1.2E-22 4E-27 191.4 21.2 275 45-339 37-342 (431)
232 3ou5_A Serine hydroxymethyltra 99.9 4.3E-21 1.5E-25 175.0 24.1 358 11-382 35-439 (490)
233 4a0g_A Adenosylmethionine-8-am 99.9 1.9E-21 6.4E-26 196.2 12.2 340 31-384 381-828 (831)
234 3n75_A LDC, lysine decarboxyla 99.9 7.1E-20 2.4E-24 180.3 22.8 299 66-385 193-561 (715)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 8.6E-18 3E-22 154.0 24.6 300 79-389 124-466 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 1.9E-16 6.6E-21 147.2 24.7 310 68-386 94-445 (450)
237 2yvq_A Carbamoyl-phosphate syn 77.1 17 0.00059 27.5 8.8 108 87-203 22-131 (143)
238 4fgs_A Probable dehydrogenase 72.6 16 0.00055 31.3 8.5 99 89-192 29-133 (273)
239 3gh5_A HEX1, beta-hexosaminida 71.3 23 0.00079 33.5 9.8 111 87-203 128-275 (525)
240 1y80_A Predicted cobalamin bin 69.5 23 0.0008 28.7 8.6 58 128-197 110-167 (210)
241 4g81_D Putative hexonate dehyd 69.5 46 0.0016 28.0 10.6 102 86-192 6-116 (255)
242 4gqr_A Pancreatic alpha-amylas 65.8 13 0.00044 34.7 7.1 26 181-206 74-99 (496)
243 2gjx_A Beta-hexosaminidase alp 65.4 27 0.00092 32.9 9.0 106 88-203 99-234 (507)
244 3rd5_A Mypaa.01249.C; ssgcid, 65.1 22 0.00076 30.4 8.0 79 88-171 15-93 (291)
245 3rwb_A TPLDH, pyridoxal 4-dehy 65.0 42 0.0014 27.8 9.5 98 89-191 6-109 (247)
246 2yxb_A Coenzyme B12-dependent 63.9 36 0.0012 26.3 8.2 58 128-197 40-97 (161)
247 4hp8_A 2-deoxy-D-gluconate 3-d 62.0 45 0.0015 27.9 9.0 101 86-192 6-109 (247)
248 4dqx_A Probable oxidoreductase 61.2 51 0.0017 27.9 9.5 100 87-191 25-130 (277)
249 2wkj_A N-acetylneuraminate lya 60.7 28 0.00096 30.2 7.7 72 128-202 8-85 (303)
250 1now_A Beta-hexosaminidase bet 59.8 35 0.0012 32.2 8.6 106 87-203 104-239 (507)
251 1ofu_X SULA, hypothetical prot 59.7 48 0.0016 24.2 10.8 101 91-201 6-114 (119)
252 3uf0_A Short-chain dehydrogena 59.5 57 0.0019 27.6 9.5 100 86-191 28-135 (273)
253 3tpc_A Short chain alcohol deh 58.8 61 0.0021 26.9 9.5 98 89-191 7-114 (257)
254 4e6p_A Probable sorbitol dehyd 58.5 69 0.0024 26.6 9.8 98 89-191 8-111 (259)
255 3f9i_A 3-oxoacyl-[acyl-carrier 57.3 41 0.0014 27.7 8.1 79 89-172 14-92 (249)
256 3vnd_A TSA, tryptophan synthas 57.1 89 0.0031 26.5 12.6 165 22-203 38-212 (267)
257 2gjh_A Designed protein; oblig 56.4 26 0.00088 20.6 4.4 30 357-386 3-32 (62)
258 2o1e_A YCDH; alpha-beta protei 56.1 70 0.0024 27.8 9.5 75 112-201 189-266 (312)
259 1oft_A SULA, hypothetical prot 55.3 70 0.0024 24.7 12.3 101 91-201 48-156 (161)
260 3gi1_A LBP, laminin-binding pr 55.0 65 0.0022 27.6 9.0 75 112-201 178-255 (286)
261 1jak_A Beta-N-acetylhexosamini 54.9 21 0.00071 33.7 6.2 110 88-203 105-250 (512)
262 3mfq_A TROA, high-affinity zin 54.6 20 0.00069 30.8 5.7 69 125-202 172-243 (282)
263 1xky_A Dihydrodipicolinate syn 54.3 21 0.00072 31.0 5.8 70 130-202 11-86 (301)
264 4eso_A Putative oxidoreductase 53.9 63 0.0022 26.9 8.7 98 89-191 8-111 (255)
265 1xrs_B D-lysine 5,6-aminomutas 53.6 1E+02 0.0035 26.0 10.0 98 91-197 98-211 (262)
266 2pju_A Propionate catabolism o 52.7 77 0.0026 26.0 8.7 42 97-140 47-88 (225)
267 3dm5_A SRP54, signal recogniti 52.1 91 0.0031 28.7 9.9 29 356-384 397-426 (443)
268 3grp_A 3-oxoacyl-(acyl carrier 51.7 58 0.002 27.4 8.2 99 88-191 26-130 (266)
269 3n74_A 3-ketoacyl-(acyl-carrie 51.5 83 0.0028 26.1 9.2 98 89-191 9-113 (261)
270 3e2i_A Thymidine kinase; Zn-bi 50.8 47 0.0016 27.2 6.9 91 99-205 43-136 (219)
271 3gvc_A Oxidoreductase, probabl 50.5 59 0.002 27.6 8.1 98 89-191 29-132 (277)
272 3dhu_A Alpha-amylase; structur 50.0 18 0.00063 33.3 5.1 25 182-206 82-106 (449)
273 3op4_A 3-oxoacyl-[acyl-carrier 49.5 82 0.0028 26.0 8.7 99 88-191 8-112 (248)
274 3gem_A Short chain dehydrogena 49.4 1.1E+02 0.0039 25.4 9.8 97 88-191 26-127 (260)
275 4b79_A PA4098, probable short- 49.3 1.1E+02 0.0039 25.3 9.4 96 89-192 11-106 (242)
276 3pxx_A Carveol dehydrogenase; 48.8 75 0.0026 26.8 8.6 98 89-191 10-126 (287)
277 3m1a_A Putative dehydrogenase; 48.6 90 0.0031 26.2 9.0 97 90-191 6-108 (281)
278 3ppi_A 3-hydroxyacyl-COA dehyd 46.9 1.1E+02 0.0036 25.8 9.2 67 89-160 30-96 (281)
279 3ged_A Short-chain dehydrogena 46.4 1E+02 0.0036 25.6 8.7 97 90-192 3-105 (247)
280 3l6e_A Oxidoreductase, short-c 46.2 86 0.0029 25.6 8.3 97 91-192 5-107 (235)
281 3t4x_A Oxidoreductase, short c 45.9 1.3E+02 0.0044 25.0 10.5 98 89-191 10-114 (267)
282 3l21_A DHDPS, dihydrodipicolin 45.7 74 0.0025 27.5 8.0 69 131-202 15-89 (304)
283 3tzq_B Short-chain type dehydr 45.4 1.3E+02 0.0046 25.0 10.0 98 89-191 11-116 (271)
284 3nav_A Tryptophan synthase alp 45.2 1.4E+02 0.0048 25.3 12.6 165 22-203 40-214 (271)
285 3mwd_B ATP-citrate synthase; A 45.2 65 0.0022 28.4 7.5 76 120-206 64-140 (334)
286 4ibo_A Gluconate dehydrogenase 44.7 1.4E+02 0.0047 25.0 10.2 101 86-191 23-132 (271)
287 4h1h_A LMO1638 protein; MCCF-l 44.4 52 0.0018 28.9 6.8 72 110-182 9-96 (327)
288 3io5_A Recombination and repai 44.3 91 0.0031 27.4 8.1 95 100-202 44-167 (333)
289 1c7s_A Beta-N-acetylhexosamini 44.2 81 0.0028 31.8 8.7 116 88-203 267-419 (858)
290 2j9r_A Thymidine kinase; TK1, 43.8 39 0.0013 27.6 5.5 90 99-204 43-135 (214)
291 3guy_A Short-chain dehydrogena 43.8 1.2E+02 0.0042 24.4 8.9 95 92-191 4-101 (230)
292 2q5c_A NTRC family transcripti 43.7 1.2E+02 0.0042 24.1 8.8 43 94-140 34-76 (196)
293 1tks_A 3,4-dihydroxy-2-butanon 43.5 29 0.001 28.0 4.5 35 165-202 160-194 (204)
294 2o23_A HADH2 protein; HSD17B10 42.7 1.4E+02 0.0048 24.5 10.9 79 89-172 12-94 (265)
295 1ccw_A Protein (glutamate muta 42.2 45 0.0015 24.9 5.3 58 128-197 25-82 (137)
296 1vl8_A Gluconate 5-dehydrogena 41.6 1.5E+02 0.0052 24.6 9.7 98 89-191 21-128 (267)
297 4fn4_A Short chain dehydrogena 41.5 1.4E+02 0.0049 24.9 8.9 99 89-192 7-115 (254)
298 3tfo_A Putative 3-oxoacyl-(acy 41.5 1.5E+02 0.0053 24.7 9.8 96 91-191 6-110 (264)
299 1g94_A Alpha-amylase; beta-alp 41.1 20 0.0007 33.1 3.8 25 182-206 63-87 (448)
300 3flu_A DHDPS, dihydrodipicolin 41.0 63 0.0022 27.8 6.8 58 142-202 18-81 (297)
301 3h7a_A Short chain dehydrogena 40.8 1.5E+02 0.0052 24.4 11.4 98 89-191 7-112 (252)
302 1pjq_A CYSG, siroheme synthase 40.8 91 0.0031 28.8 8.2 96 87-206 10-107 (457)
303 1pq4_A Periplasmic binding pro 40.7 1.7E+02 0.0058 25.0 9.5 73 112-201 189-264 (291)
304 3s5o_A 4-hydroxy-2-oxoglutarat 40.7 62 0.0021 28.1 6.7 58 142-202 25-88 (307)
305 4dyv_A Short-chain dehydrogena 40.6 1.1E+02 0.0039 25.6 8.3 97 90-191 29-132 (272)
306 3tsm_A IGPS, indole-3-glycerol 40.4 1.7E+02 0.0058 24.8 9.3 50 147-204 127-176 (272)
307 3cpr_A Dihydrodipicolinate syn 40.4 96 0.0033 26.8 7.8 67 133-202 18-90 (304)
308 3dz1_A Dihydrodipicolinate syn 40.3 54 0.0019 28.5 6.2 58 142-202 19-81 (313)
309 1vhx_A Putative holliday junct 39.9 61 0.0021 24.7 5.7 58 148-206 40-100 (150)
310 3tla_A MCCF; serine protease, 39.8 94 0.0032 27.8 7.8 71 110-182 40-127 (371)
311 3av3_A Phosphoribosylglycinami 39.8 93 0.0032 25.2 7.2 86 92-186 7-100 (212)
312 3ezx_A MMCP 1, monomethylamine 39.8 1.5E+02 0.0051 24.0 9.0 72 114-197 93-173 (215)
313 3v2g_A 3-oxoacyl-[acyl-carrier 39.6 1.5E+02 0.0053 24.7 9.0 101 86-191 28-138 (271)
314 4dpp_A DHDPS 2, dihydrodipicol 39.5 1.2E+02 0.0042 26.9 8.4 70 130-202 58-133 (360)
315 3lyl_A 3-oxoacyl-(acyl-carrier 38.6 1.6E+02 0.0054 24.0 10.4 98 89-191 5-111 (247)
316 4fc7_A Peroxisomal 2,4-dienoyl 38.4 1.7E+02 0.006 24.4 9.7 98 89-191 27-134 (277)
317 4dmm_A 3-oxoacyl-[acyl-carrier 38.3 1.3E+02 0.0044 25.2 8.3 99 88-191 27-135 (269)
318 3gaf_A 7-alpha-hydroxysteroid 38.1 1.6E+02 0.0056 24.2 8.9 100 87-191 10-117 (256)
319 3h5d_A DHDPS, dihydrodipicolin 37.9 77 0.0026 27.5 6.8 68 132-202 8-81 (311)
320 3rjz_A N-type ATP pyrophosphat 37.9 1.7E+02 0.0059 24.2 9.9 100 91-201 7-120 (237)
321 2i2x_B MTAC, methyltransferase 37.8 1.7E+02 0.0057 24.5 8.8 72 114-197 124-202 (258)
322 3sju_A Keto reductase; short-c 37.7 1.7E+02 0.006 24.5 9.1 97 90-191 25-130 (279)
323 2ew8_A (S)-1-phenylethanol deh 37.6 1.7E+02 0.0058 24.0 10.4 98 89-191 7-111 (249)
324 1jr2_A Uroporphyrinogen-III sy 37.3 53 0.0018 28.0 5.7 77 95-173 139-219 (286)
325 4e5s_A MCCFLIKE protein (BA_56 37.2 1.1E+02 0.0036 27.0 7.6 71 110-182 9-96 (331)
326 3uve_A Carveol dehydrogenase ( 36.9 1.6E+02 0.0053 24.8 8.7 98 89-191 11-134 (286)
327 3tjr_A Short chain dehydrogena 36.6 2E+02 0.0068 24.5 9.5 99 88-191 30-137 (301)
328 3ruf_A WBGU; rossmann fold, UD 36.6 2.1E+02 0.0071 24.7 10.2 100 89-198 25-143 (351)
329 3qlj_A Short chain dehydrogena 36.6 2E+02 0.0068 24.7 9.5 99 89-192 27-144 (322)
330 1ud2_A Amylase, alpha-amylase; 36.6 26 0.0009 32.6 3.8 25 182-206 79-103 (480)
331 1qys_A TOP7; alpha-beta, novel 36.5 72 0.0025 20.8 4.7 32 355-386 45-76 (106)
332 1mxg_A Alpha amylase; hyperthe 36.5 27 0.00092 32.1 3.8 25 182-206 85-109 (435)
333 2nu8_A Succinyl-COA ligase [AD 36.3 75 0.0026 27.2 6.4 72 123-206 53-124 (288)
334 3bh4_A Alpha-amylase; calcium, 36.3 27 0.00091 32.6 3.8 25 182-206 77-101 (483)
335 3sx2_A Putative 3-ketoacyl-(ac 36.2 1.5E+02 0.005 24.8 8.4 96 89-191 13-127 (278)
336 3i6i_A Putative leucoanthocyan 36.1 1.9E+02 0.0065 25.0 9.4 98 90-202 11-116 (346)
337 1ht6_A AMY1, alpha-amylase iso 36.1 28 0.00096 31.6 3.8 25 182-206 67-91 (405)
338 1hvx_A Alpha-amylase; hydrolas 36.0 27 0.00093 32.9 3.8 25 182-206 80-104 (515)
339 3n0v_A Formyltetrahydrofolate 35.8 2.1E+02 0.0071 24.5 9.4 111 69-187 63-185 (286)
340 1wpc_A Glucan 1,4-alpha-maltoh 35.1 29 0.00098 32.4 3.8 25 182-206 81-105 (485)
341 3rih_A Short chain dehydrogena 35.1 2.1E+02 0.0071 24.3 10.6 99 88-191 40-148 (293)
342 1hxh_A 3BETA/17BETA-hydroxyste 35.0 1.9E+02 0.0064 23.7 9.6 97 90-191 7-109 (253)
343 1lwj_A 4-alpha-glucanotransfer 34.9 28 0.00095 32.1 3.7 25 182-206 68-92 (441)
344 3fkr_A L-2-keto-3-deoxyarabona 34.8 52 0.0018 28.6 5.2 58 142-202 19-82 (309)
345 3tak_A DHDPS, dihydrodipicolin 34.8 71 0.0024 27.4 6.0 58 142-202 12-75 (291)
346 3tsc_A Putative oxidoreductase 34.7 2E+02 0.0068 24.0 9.2 98 89-191 11-130 (277)
347 1hdc_A 3-alpha, 20 beta-hydrox 34.7 1.9E+02 0.0065 23.7 9.4 97 90-191 6-108 (254)
348 3sc4_A Short chain dehydrogena 34.6 2.1E+02 0.007 24.1 11.1 98 89-191 9-122 (285)
349 1xp8_A RECA protein, recombina 34.6 89 0.003 27.9 6.8 40 322-363 278-317 (366)
350 4imr_A 3-oxoacyl-(acyl-carrier 34.4 2E+02 0.007 24.0 10.3 101 86-191 30-138 (275)
351 3is3_A 17BETA-hydroxysteroid d 34.2 1.4E+02 0.0048 24.9 7.9 98 89-191 18-125 (270)
352 2guy_A Alpha-amylase A; (beta- 34.0 31 0.001 32.1 3.8 25 182-206 96-120 (478)
353 1yht_A DSPB; beta barrel, hydr 34.0 58 0.002 29.1 5.5 74 128-203 40-114 (367)
354 1wjw_A Phosphoacetylglucosamin 33.7 1.2E+02 0.004 21.7 6.1 41 344-387 59-99 (112)
355 2yv2_A Succinyl-COA synthetase 33.6 98 0.0034 26.6 6.7 48 151-206 84-131 (297)
356 3rss_A Putative uncharacterize 33.5 1.4E+02 0.0049 27.9 8.3 47 152-206 311-357 (502)
357 3cxt_A Dehydrogenase with diff 33.5 2E+02 0.0069 24.3 8.8 100 87-191 32-140 (291)
358 3auf_A Glycinamide ribonucleot 33.4 2E+02 0.0068 23.6 9.1 89 92-186 26-119 (229)
359 2r8w_A AGR_C_1641P; APC7498, d 33.1 87 0.003 27.5 6.4 58 142-202 45-108 (332)
360 1gcy_A Glucan 1,4-alpha-maltot 33.0 32 0.0011 32.5 3.8 25 182-206 91-115 (527)
361 4aie_A Glucan 1,6-alpha-glucos 33.0 32 0.0011 32.6 3.8 25 182-206 78-102 (549)
362 3l77_A Short-chain alcohol deh 32.9 1.9E+02 0.0066 23.2 9.4 96 91-191 4-109 (235)
363 1f6k_A N-acetylneuraminate lya 32.8 84 0.0029 27.0 6.2 58 142-202 14-78 (293)
364 1jae_A Alpha-amylase; glycosid 32.8 28 0.00095 32.4 3.3 25 182-206 73-97 (471)
365 1x7f_A Outer surface protein; 32.8 29 0.00098 31.3 3.2 54 183-245 73-128 (385)
366 3b4u_A Dihydrodipicolinate syn 32.7 83 0.0028 27.0 6.1 52 142-196 14-68 (294)
367 3ohs_X Trans-1,2-dihydrobenzen 32.5 1E+02 0.0035 26.8 6.9 70 123-204 55-124 (334)
368 3o63_A Probable thiamine-phosp 32.5 45 0.0015 27.8 4.2 53 152-206 46-105 (243)
369 2z1k_A (NEO)pullulanase; hydro 32.3 34 0.0012 31.8 3.8 25 182-206 95-119 (475)
370 3kl4_A SRP54, signal recogniti 32.2 91 0.0031 28.6 6.6 27 356-382 400-427 (433)
371 3kux_A Putative oxidoreductase 32.1 1.3E+02 0.0044 26.4 7.6 69 123-203 56-124 (352)
372 4es6_A Uroporphyrinogen-III sy 32.1 19 0.00067 30.2 1.9 61 113-174 6-68 (254)
373 1wza_A Alpha-amylase A; hydrol 32.0 34 0.0011 32.0 3.7 25 182-206 80-104 (488)
374 3re1_A Uroporphyrinogen-III sy 32.0 21 0.00072 30.3 2.2 62 112-174 13-76 (269)
375 2yv1_A Succinyl-COA ligase [AD 31.9 63 0.0022 27.8 5.2 47 152-206 84-130 (294)
376 2ywr_A Phosphoribosylglycinami 31.8 1.2E+02 0.0041 24.7 6.6 86 92-186 5-98 (216)
377 3ozo_A N-acetylglucosaminidase 31.7 61 0.0021 31.0 5.4 102 91-203 142-275 (572)
378 3r1i_A Short-chain type dehydr 31.7 2.3E+02 0.0078 23.7 10.4 101 86-191 29-138 (276)
379 1toa_A Tromp-1, protein (perip 31.6 1.2E+02 0.004 26.4 7.0 76 113-200 197-277 (313)
380 2v9d_A YAGE; dihydrodipicolini 31.4 87 0.003 27.7 6.1 57 142-201 42-104 (343)
381 3db2_A Putative NADPH-dependen 31.3 1.7E+02 0.0057 25.7 8.2 72 123-206 55-126 (354)
382 2aaa_A Alpha-amylase; glycosid 31.3 33 0.0011 32.0 3.5 25 182-206 96-120 (484)
383 3pgx_A Carveol dehydrogenase; 31.3 2.2E+02 0.0074 23.8 8.6 98 89-191 15-134 (280)
384 3l5o_A Uncharacterized protein 31.2 75 0.0026 27.0 5.4 73 112-196 140-212 (270)
385 3tha_A Tryptophan synthase alp 31.1 2.3E+02 0.008 23.6 11.9 165 18-202 29-204 (252)
386 1meo_A Phosophoribosylglycinam 31.0 1.5E+02 0.005 24.0 7.0 89 92-186 4-97 (209)
387 3sr3_A Microcin immunity prote 30.9 1.5E+02 0.0052 26.0 7.6 71 110-182 10-97 (336)
388 1qyd_A Pinoresinol-lariciresin 30.6 2.4E+02 0.0083 23.7 9.3 100 91-202 6-113 (313)
389 2hmc_A AGR_L_411P, dihydrodipi 30.6 71 0.0024 28.2 5.4 58 142-202 37-97 (344)
390 1hjs_A Beta-1,4-galactanase; 4 30.6 76 0.0026 27.9 5.6 32 173-204 49-80 (332)
391 3bk2_A RNAse J, metal dependen 30.5 85 0.0029 29.9 6.4 77 111-198 337-423 (562)
392 3dqp_A Oxidoreductase YLBE; al 30.4 2E+02 0.0069 22.7 10.1 93 92-197 3-97 (219)
393 3v8b_A Putative dehydrogenase, 30.4 2.4E+02 0.0083 23.6 9.4 99 88-191 27-135 (283)
394 3qze_A DHDPS, dihydrodipicolin 30.2 66 0.0023 28.0 5.1 58 142-202 34-97 (314)
395 3bzy_B ESCU; auto cleavage pro 30.2 32 0.0011 23.3 2.3 21 186-206 29-49 (83)
396 3rkr_A Short chain oxidoreduct 30.2 2.3E+02 0.0079 23.3 9.9 98 89-191 29-136 (262)
397 3o1l_A Formyltetrahydrofolate 30.2 1.7E+02 0.0057 25.3 7.5 111 69-187 78-200 (302)
398 2a4k_A 3-oxoacyl-[acyl carrier 30.2 2.2E+02 0.0074 23.6 8.4 97 90-191 7-109 (263)
399 1w3i_A EDA, 2-keto-3-deoxy glu 30.2 88 0.003 26.8 5.9 52 142-196 10-64 (293)
400 3kts_A Glycerol uptake operon 30.1 92 0.0032 24.9 5.4 42 151-202 18-59 (192)
401 3t7c_A Carveol dehydrogenase; 30.0 2.5E+02 0.0086 23.7 10.0 98 89-191 28-147 (299)
402 3oec_A Carveol dehydrogenase ( 30.0 2.2E+02 0.0076 24.4 8.6 98 89-191 46-164 (317)
403 3lf2_A Short chain oxidoreduct 29.5 2.4E+02 0.0082 23.3 8.7 101 87-192 6-117 (265)
404 3gdo_A Uncharacterized oxidore 29.5 1.3E+02 0.0043 26.6 7.0 71 123-205 54-124 (358)
405 3e96_A Dihydrodipicolinate syn 29.5 73 0.0025 27.7 5.3 68 132-202 12-86 (316)
406 1ua7_A Alpha-amylase; beta-alp 29.4 31 0.0011 31.5 3.0 25 182-206 73-97 (422)
407 3m5v_A DHDPS, dihydrodipicolin 29.3 74 0.0025 27.5 5.2 53 148-202 23-82 (301)
408 3hh8_A Metal ABC transporter s 29.2 1.1E+02 0.0039 26.1 6.4 73 114-201 184-259 (294)
409 1xx6_A Thymidine kinase; NESG, 29.2 92 0.0032 24.7 5.4 89 99-203 23-114 (191)
410 2yl5_A Beta-N-acetylhexosamini 29.2 43 0.0015 30.9 3.9 29 175-203 86-114 (442)
411 3osu_A 3-oxoacyl-[acyl-carrier 29.2 2.3E+02 0.0078 23.1 8.2 97 90-191 5-111 (246)
412 3e18_A Oxidoreductase; dehydro 29.1 1.4E+02 0.0049 26.2 7.3 71 122-204 53-123 (359)
413 2dh2_A 4F2 cell-surface antige 29.1 39 0.0013 30.9 3.6 25 182-206 80-104 (424)
414 1iv0_A Hypothetical protein; r 29.1 55 0.0019 22.8 3.6 57 149-206 37-95 (98)
415 3si9_A DHDPS, dihydrodipicolin 28.8 88 0.003 27.2 5.6 58 142-202 33-96 (315)
416 2jah_A Clavulanic acid dehydro 28.6 2.4E+02 0.0082 23.0 9.4 97 90-191 8-113 (247)
417 2nuw_A 2-keto-3-deoxygluconate 28.6 78 0.0027 27.1 5.2 47 148-196 15-64 (288)
418 1j0h_A Neopullulanase; beta-al 28.5 42 0.0014 32.3 3.8 25 182-206 221-245 (588)
419 1u83_A Phosphosulfolactate syn 28.4 2.6E+02 0.0089 23.7 8.1 110 73-206 82-194 (276)
420 3cpq_A 50S ribosomal protein L 28.3 1.2E+02 0.0042 21.4 5.4 42 152-201 26-67 (110)
421 4fb5_A Probable oxidoreductase 28.2 1.2E+02 0.0042 26.8 6.8 23 181-203 129-151 (393)
422 3e48_A Putative nucleoside-dip 28.1 2.6E+02 0.0088 23.2 8.8 93 92-198 3-98 (289)
423 3lou_A Formyltetrahydrofolate 28.0 1.6E+02 0.0055 25.3 7.0 111 69-187 68-190 (292)
424 3imf_A Short chain dehydrogena 27.9 2.5E+02 0.0086 23.0 9.3 99 89-192 6-113 (257)
425 1wzl_A Alpha-amylase II; pullu 27.8 41 0.0014 32.3 3.7 25 182-206 218-242 (585)
426 3v5n_A Oxidoreductase; structu 27.8 2.2E+02 0.0076 25.7 8.5 73 122-206 93-170 (417)
427 4aef_A Neopullulanase (alpha-a 27.7 44 0.0015 32.6 3.8 56 151-206 237-308 (645)
428 2wc7_A Alpha amylase, catalyti 27.7 43 0.0015 31.2 3.7 24 183-206 102-125 (488)
429 2b8t_A Thymidine kinase; deoxy 27.6 63 0.0022 26.5 4.3 93 99-204 26-123 (223)
430 3bc9_A AMYB, alpha amylase, ca 27.5 45 0.0015 32.1 3.8 25 182-206 207-231 (599)
431 3edf_A FSPCMD, cyclomaltodextr 27.5 45 0.0015 32.2 3.8 25 182-206 197-221 (601)
432 2pcq_A Putative dihydrodipicol 27.4 28 0.00095 29.9 2.1 56 142-201 9-66 (283)
433 2orv_A Thymidine kinase; TP4A 27.3 1.8E+02 0.0063 24.0 7.0 89 99-206 34-125 (234)
434 2ojp_A DHDPS, dihydrodipicolin 27.3 87 0.003 26.9 5.3 58 142-202 12-75 (292)
435 1m53_A Isomaltulose synthase; 27.2 46 0.0016 31.8 3.8 25 182-206 91-115 (570)
436 3o74_A Fructose transport syst 27.1 94 0.0032 25.6 5.5 107 93-212 99-217 (272)
437 1ea9_C Cyclomaltodextrinase; h 27.1 46 0.0016 31.9 3.8 26 181-206 216-241 (583)
438 1zja_A Trehalulose synthase; s 27.0 47 0.0016 31.7 3.8 25 182-206 78-102 (557)
439 3zq4_A Ribonuclease J 1, RNAse 26.8 1.1E+02 0.0039 29.0 6.5 79 111-198 322-408 (555)
440 1b93_A Protein (methylglyoxal 26.8 2.1E+02 0.0072 21.8 8.9 92 100-203 24-119 (152)
441 2yl6_A Beta-N-acetylhexosamini 26.8 43 0.0015 30.8 3.4 28 176-203 84-111 (434)
442 3k8k_A Alpha-amylase, SUSG; al 26.7 1.2E+02 0.0041 29.7 6.7 26 181-206 104-129 (669)
443 3b3e_A YVGN protein; aldo-keto 26.7 3.1E+02 0.01 23.6 10.6 53 35-95 54-111 (310)
444 4had_A Probable oxidoreductase 26.6 80 0.0027 27.7 5.1 21 183-203 123-143 (350)
445 1uok_A Oligo-1,6-glucosidase; 26.6 48 0.0016 31.6 3.8 25 182-206 77-101 (558)
446 3enk_A UDP-glucose 4-epimerase 26.6 3E+02 0.01 23.5 9.0 102 91-198 7-121 (341)
447 1fob_A Beta-1,4-galactanase; B 26.5 69 0.0024 28.1 4.6 31 174-204 50-80 (334)
448 3a5f_A Dihydrodipicolinate syn 26.4 83 0.0029 27.0 5.0 56 142-201 13-74 (291)
449 3keo_A Redox-sensing transcrip 26.4 1.9E+02 0.0066 23.4 6.9 42 152-203 137-178 (212)
450 3oqb_A Oxidoreductase; structu 26.2 2.5E+02 0.0086 24.8 8.5 70 123-204 72-141 (383)
451 3pk0_A Short-chain dehydrogena 26.1 2.8E+02 0.0094 22.9 8.6 99 88-191 9-117 (262)
452 2wsb_A Galactitol dehydrogenas 26.1 2.6E+02 0.009 22.6 9.8 98 89-191 11-114 (254)
453 3kvo_A Hydroxysteroid dehydrog 26.0 3.3E+02 0.011 23.7 11.7 98 89-191 45-158 (346)
454 3v7e_A Ribosome-associated pro 26.0 1.5E+02 0.005 19.7 5.9 45 152-204 16-60 (82)
455 3na8_A Putative dihydrodipicol 25.8 78 0.0027 27.6 4.7 58 142-202 35-98 (315)
456 2ze0_A Alpha-glucosidase; TIM 25.7 51 0.0017 31.4 3.8 25 182-206 77-101 (555)
457 1x1t_A D(-)-3-hydroxybutyrate 25.7 2.8E+02 0.0094 22.7 9.9 97 90-191 5-112 (260)
458 4ggi_A UDP-2,3-diacylglucosami 25.6 1.9E+02 0.0064 24.6 7.1 41 152-201 234-275 (283)
459 3cx3_A Lipoprotein; zinc-bindi 25.5 78 0.0027 27.0 4.6 56 112-172 176-234 (284)
460 4egf_A L-xylulose reductase; s 25.4 2.9E+02 0.0098 22.8 9.0 100 87-191 18-127 (266)
461 1qho_A Alpha-amylase; glycosid 25.3 48 0.0016 32.6 3.7 25 182-206 106-130 (686)
462 4aee_A Alpha amylase, catalyti 25.3 50 0.0017 32.5 3.8 25 182-206 310-334 (696)
463 3bmv_A Cyclomaltodextrin gluca 25.3 48 0.0017 32.5 3.7 25 182-206 115-139 (683)
464 1cyg_A Cyclodextrin glucanotra 25.2 49 0.0017 32.5 3.7 25 182-206 110-134 (680)
465 3f7j_A YVGN protein; aldo-keto 25.2 3E+02 0.01 23.0 10.3 149 32-202 17-188 (276)
466 2ehh_A DHDPS, dihydrodipicolin 25.1 1.3E+02 0.0044 25.8 6.0 53 148-202 16-74 (294)
467 4ew6_A D-galactose-1-dehydroge 25.0 1E+02 0.0034 26.9 5.4 72 123-206 69-141 (330)
468 1d3c_A Cyclodextrin glycosyltr 25.0 49 0.0017 32.5 3.7 25 182-206 114-138 (686)
469 3ak4_A NADH-dependent quinucli 25.0 2.9E+02 0.0098 22.7 9.3 99 88-191 11-115 (263)
470 3aj7_A Oligo-1,6-glucosidase; 24.9 54 0.0018 31.5 3.8 25 182-206 86-110 (589)
471 3ai3_A NADPH-sorbose reductase 24.9 2.9E+02 0.0098 22.7 9.6 98 89-191 7-114 (263)
472 1lc0_A Biliverdin reductase A; 24.9 2.2E+02 0.0076 24.1 7.5 70 123-204 54-123 (294)
473 3evn_A Oxidoreductase, GFO/IDH 24.9 1.6E+02 0.0053 25.6 6.7 68 124-203 57-124 (329)
474 1ny1_A Probable polysaccharide 24.9 2.3E+02 0.008 23.2 7.4 70 127-201 151-224 (240)
475 3v2h_A D-beta-hydroxybutyrate 24.9 3E+02 0.01 22.9 10.4 98 89-191 25-133 (281)
476 2p2s_A Putative oxidoreductase 24.8 1.6E+02 0.0056 25.4 6.8 69 123-203 55-123 (336)
477 3f4l_A Putative oxidoreductase 24.7 1.5E+02 0.0053 25.8 6.7 70 124-205 55-124 (345)
478 3nl6_A Thiamine biosynthetic b 24.7 93 0.0032 29.5 5.3 51 152-206 28-78 (540)
479 2vt1_B Surface presentation of 24.7 45 0.0015 23.1 2.3 20 185-204 28-47 (93)
480 3ezl_A Acetoacetyl-COA reducta 24.7 2.8E+02 0.0097 22.5 8.4 98 89-191 13-120 (256)
481 3o38_A Short chain dehydrogena 24.6 2.9E+02 0.01 22.6 8.4 98 89-191 22-130 (266)
482 1uls_A Putative 3-oxoacyl-acyl 24.6 2.8E+02 0.0097 22.5 9.7 95 90-191 6-106 (245)
483 3tl3_A Short-chain type dehydr 24.5 1.4E+02 0.0047 24.6 6.1 64 89-160 9-72 (257)
484 2zic_A Dextran glucosidase; TI 24.4 50 0.0017 31.3 3.5 25 182-206 77-101 (543)
485 3j21_Z 50S ribosomal protein L 24.4 1.8E+02 0.006 20.1 5.6 42 152-201 20-61 (99)
486 3t7y_A YOP proteins translocat 24.3 43 0.0015 23.4 2.2 21 185-205 43-63 (97)
487 2zr9_A Protein RECA, recombina 24.2 95 0.0033 27.4 5.1 38 165-202 140-193 (349)
488 3qfe_A Putative dihydrodipicol 24.1 87 0.003 27.3 4.7 58 142-202 21-85 (318)
489 2yxg_A DHDPS, dihydrodipicolin 24.1 1.2E+02 0.0042 25.9 5.6 53 148-202 16-74 (289)
490 3e03_A Short chain dehydrogena 24.1 3.1E+02 0.011 22.7 11.5 99 88-191 5-119 (274)
491 3u5t_A 3-oxoacyl-[acyl-carrier 24.1 3E+02 0.01 22.8 8.1 98 89-191 27-134 (267)
492 4gqa_A NAD binding oxidoreduct 23.9 1.7E+02 0.0057 26.3 6.9 70 123-204 85-154 (412)
493 3p9x_A Phosphoribosylglycinami 23.9 2.9E+02 0.0098 22.3 7.8 91 92-188 6-101 (211)
494 3i23_A Oxidoreductase, GFO/IDH 23.8 1.5E+02 0.0051 26.0 6.4 69 124-204 55-123 (349)
495 3dzv_A 4-methyl-5-(beta-hydrox 23.8 1.3E+02 0.0043 25.6 5.5 62 128-206 34-97 (273)
496 2rhc_B Actinorhodin polyketide 23.7 3.2E+02 0.011 22.7 10.0 98 89-191 22-128 (277)
497 3moi_A Probable dehydrogenase; 23.7 1.7E+02 0.0059 26.0 6.9 22 366-387 361-382 (387)
498 2wm3_A NMRA-like family domain 23.6 1.9E+02 0.0064 24.3 6.9 99 90-198 6-107 (299)
499 3pzt_A Endoglucanase; alpha/be 23.6 52 0.0018 28.8 3.2 22 183-204 104-125 (327)
500 3fhl_A Putative oxidoreductase 23.5 1.4E+02 0.0046 26.4 6.1 71 123-205 54-124 (362)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1e-49 Score=373.82 Aligned_cols=366 Identities=26% Similarity=0.467 Sum_probs=307.0
Q ss_pred HhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|+.....+.+.++.+ ....+++.++|+.|.+++++|+.+.+++.+.+... ...|++..|..++|+++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~ 82 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR 82 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence 567777665555544333 33457889999999999888999999998887653 4578777889999999999998
Q ss_pred hhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890 83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (398)
Q Consensus 83 ~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l 159 (398)
+.+++ ++++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.+
T Consensus 83 ~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 161 (385)
T 1b5p_A 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI 161 (385)
T ss_dssp HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred HHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHHhc
Confidence 87764 57899999999999999999999999999999999999999999999999999 8765 56788999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCC
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~ 235 (398)
+++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||.+|++
T Consensus 162 ~~~--~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 239 (385)
T 1b5p_A 162 TPR--TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239 (385)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred CCC--CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCc
Confidence 865 499999999999999999999999999999999999999999 66654211111 126799999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+|+||++++ +++++.+........++.+.+.+.++..+|+. ..+++++..+.++++++.+.+.|++++ +.+.
T Consensus 240 G~RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~ 315 (385)
T 1b5p_A 240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG-LKAV 315 (385)
T ss_dssp GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBC
T ss_pred ccceEEEEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCC-Ceec
Confidence 9999999998 78888888776656678889999999889975 456778888999999999999998774 4777
Q ss_pred cCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.+++++|+|+.++....+..+++++|+ ++||.+.||..|+.++++|||++ .+++++++++++|.++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARVLG 383 (385)
T ss_dssp CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred CCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 788788999988632246778888887 89999999998877889999999 588899999998877654
No 2
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=4.8e-48 Score=363.08 Aligned_cols=371 Identities=26% Similarity=0.429 Sum_probs=315.3
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
|++++|......+.+.++.+...+.+++++|+.|.+++++++.+.+++.+.+.+. ...|++..+..++++.+++++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~ 79 (389)
T 1gd9_A 1 MALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ 79 (389)
T ss_dssp -CHHHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CchhhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHH
Confidence 6688888888888888887777665789999999998888999999999988664 356877778999999999999887
Q ss_pred cC--CCCCc-EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890 85 NK--LYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (398)
Q Consensus 85 ~~--~~~~~-v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~ 160 (398)
+| +++++ |++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.++
T Consensus 80 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 80 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp HCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCC
T ss_pred hCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCCccCCCCCHHHHHHhcC
Confidence 77 46788 9999999999999999999999999999999999999999999999999 7764 357789999999998
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccccc----CCcEEEEcccccccC
Q 015890 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVE----GDHVVNLFSFSKAYG 233 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~----~~~~i~~~s~sK~~~ 233 (398)
++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++. ...... .+++++++|+||.+|
T Consensus 159 ~~--~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (389)
T 1gd9_A 159 DK--TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA 236 (389)
T ss_dssp TT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred cC--ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence 64 589999999999999999999999999999999999999999 555543 111111 357899999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+.... ++++..+.++++++.+.+.|++++ +.+
T Consensus 237 ~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 312 (389)
T 1gd9_A 237 MTGWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-LPT 312 (389)
T ss_dssp CGGGCCEEEECC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred CcccceEEEEEC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcC-Cee
Confidence 999999999998 78989888777666788899999999999986444 678888899999999999998875 466
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..+.+++++|+.++....+..++.++|++++||.+.+|..|+ .++++||+++. +++++++++++|.+++++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 313 VKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp CCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred cCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 667778889988864223677888888668999999998876 36799999997 8999999999999988763
No 3
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=3.4e-48 Score=363.96 Aligned_cols=372 Identities=24% Similarity=0.438 Sum_probs=311.3
Q ss_pred hhHhHHhhccCch----HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|++++|+.....+ ......+...+|+++++|+.|.++++.|+.+.+++.+.+.+. ...|++..+..++++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~ 79 (388)
T 1j32_A 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK 79 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred CchhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 4456666644332 333444445578899999999998888999999999888653 45787778899999999999
Q ss_pred HhhhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890 81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (398)
Q Consensus 81 l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~ 157 (398)
+.+.+++ ++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.|++
T Consensus 80 ~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~ 158 (388)
T 1j32_A 80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ 158 (388)
T ss_dssp HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred HHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHH
Confidence 9887764 57899999999999999999999999999999999999999999999999999 7764 357789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---cccc---CCcEEEEcccc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVE---GDHVVNLFSFS 229 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~~---~~~~i~~~s~s 229 (398)
.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.+. .... .++++++.|+|
T Consensus 159 ~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 236 (388)
T 1j32_A 159 AITPK--TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236 (388)
T ss_dssp HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred hcCcC--ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence 99865 499999999999999999999999999999999999999999 66654322 1111 34689999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|.+|++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...+++++..+.+.++++.+.+.|++++++
T Consensus 237 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 313 (388)
T 1j32_A 237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL 313 (388)
T ss_dssp TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred hccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999998 7888888877666677888999998888998656788888999999999999999988666
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+..+.+++++|+.++....+..++..+|++++||.+.+|..|+.++++|++++. +++++++++++|.++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7777777888888876322357788888875689999999888778999999984 8999999999999988764
No 4
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1e-47 Score=361.69 Aligned_cols=360 Identities=22% Similarity=0.315 Sum_probs=307.8
Q ss_pred hHHhhccCchHHHHHHHHH-----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 8 AKRALETEMPIMVQIQELV-----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
++++.....+.+..+.+.. ++|+++++|+.|.+++++||.+.+++.+.+.. ...|++..+..++++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~ 80 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK 80 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence 3445555555555555443 34789999999999999999999999998763 5779888889999999999999
Q ss_pred hhcCC---CCC-cEEEecChHHHHHHHHHHhccCC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 83 QENKL---YKS-SVMVTAGANQAFVNIVLTLCDAG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 83 ~~~~~---~~~-~v~~~~g~t~a~~~~~~~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
+.++. +++ +|++|+|++++++.++.+++++| |+|+++.|+|+++...++..|.+++.+ +.+++++.+|++
T Consensus 81 ~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~g~~~d~~ 159 (396)
T 3jtx_A 81 RRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWR 159 (396)
T ss_dssp HHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCTTTCCCCGG
T ss_pred HhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEe-ecCCCCCccCHH
Confidence 88874 588 99999999999999999999986 799999999999999999999999999 887778889999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc--------cCCcE
Q 015890 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV--------EGDHV 222 (398)
Q Consensus 154 ~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~--------~~~~~ 222 (398)
.|++.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++ .+.... ..+++
T Consensus 160 ~l~~~~~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
T 3jtx_A 160 SISEEVWKR--TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKL 237 (396)
T ss_dssp GSCHHHHHT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTE
T ss_pred HHHHhhccC--cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcE
Confidence 999999875 499999999999999999999999999999999999999999 66655 222211 26789
Q ss_pred EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
+++.|+||.++++|+|+||++.+ +++++.+.......+++.+.+.+.++.++++. .+++.+.++.+.++++.+.+.
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~ 313 (396)
T 3jtx_A 238 LMFTSLSKRSNVPGLRSGFVAGD---AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPI 313 (396)
T ss_dssp EEEEESTTTSSCGGGCCEEEEEC---HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 88999888777666788999999999999986 678889999999999999999
Q ss_pred hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecCCCHHHHHHHH
Q 015890 303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA 374 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~ 374 (398)
|++. ..+..+.+++|+|+.++. .+..+++.+|++++||.+.||+.|+. .+++||+++. +++++++++
T Consensus 314 l~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l 388 (396)
T 3jtx_A 314 LQQV--FDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAA 388 (396)
T ss_dssp HTTT--SCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHH
T ss_pred HHhc--CCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHH
Confidence 9876 245567778999999975 36788888888788999999998753 4799999997 899999999
Q ss_pred HHHHHHH
Q 015890 375 DRLRRGL 381 (398)
Q Consensus 375 ~~l~~~~ 381 (398)
++|.+++
T Consensus 389 ~~l~~~l 395 (396)
T 3jtx_A 389 EDIVSLY 395 (396)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998764
No 5
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=9.4e-49 Score=369.50 Aligned_cols=371 Identities=20% Similarity=0.302 Sum_probs=304.8
Q ss_pred chhhHhHHhhccCchHHHHHHHHHH--cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 3 SYAKLAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
+.|+ ++|+.......+..+.+... .|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++.++++
T Consensus 19 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 97 (404)
T 2o1b_A 19 SHMI-SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDF 97 (404)
T ss_dssp ---C-CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHH
T ss_pred chhh-hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3454 67777655555555544443 46779999999998888999999999987553245687767899999999999
Q ss_pred HhhhcCCC--C-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 81 LNQENKLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 81 l~~~~~~~--~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
+.+.++++ + ++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++++.+|++.|++
T Consensus 98 ~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~ 176 (404)
T 2o1b_A 98 YQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDS 176 (404)
T ss_dssp HHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEE-ECCTTTCCCCGGGSCH
T ss_pred HHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCcccCcCCHHHHHH
Confidence 98877754 4 799999999999999999999999999999999999999999999999999 7776677789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKA 231 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~ 231 (398)
.++++ +++|++++|+||||.++|.+++++|+++|+++|+++|+||+| +.+++....... .+++++++|+||.
T Consensus 177 ~l~~~--~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~ 254 (404)
T 2o1b_A 177 QIIDK--TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKG 254 (404)
T ss_dssp HHHHH--EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTT
T ss_pred hhccC--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchh
Confidence 98754 499999999999999999999999999999999999999999 655443222221 2578999999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
+|++|+|+||++++ +++++.+.......+++.+.+.+.++.++|+...+++++..+.++++++.+.+.|++++ +.+
T Consensus 255 ~g~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 330 (404)
T 2o1b_A 255 YNMSGFRVGFAVGN---KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPF 330 (404)
T ss_dssp TTCGGGCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCE
T ss_pred ccCchhheEeEecC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-Cee
Confidence 99899999999998 88888888776666678899999999999986567788888899999999999998875 467
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
..+.+++|+|+.++.. .+..+++++|++++||.+.+|..|+. ++++||+++. +++++++++++|.+++++
T Consensus 331 ~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 331 VHAKGGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp ECCCBSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGG
T ss_pred cCCCcceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 7777788899999753 35678888887678999999988863 6899999997 788999999999887654
No 6
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8e-48 Score=361.82 Aligned_cols=356 Identities=24% Similarity=0.352 Sum_probs=299.6
Q ss_pred HHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEec
Q 015890 19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTA 96 (398)
Q Consensus 19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~ 96 (398)
+....+...+|+++++|+.|.+++++||++.+++.+.+.+. ...|++..+..++|+.+++++.+.++ +++++|++|+
T Consensus 20 ~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~ 98 (391)
T 3h14_A 20 MEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP 98 (391)
T ss_dssp HHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred HHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence 34445555688999999999999999999999999988764 46788888899999999999988776 5678999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ ++.+|++++++. + +++|++++|+|
T Consensus 99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~---~--~~~v~i~~p~n 172 (391)
T 3h14_A 99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDL-PTAPENRLQPVPADFAGL---D--LAGLMVASPAN 172 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCGGGTTSCCHHHHTTS---C--CSEEEEESSCT
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHhc---C--CeEEEECCCCC
Confidence 99999999999999999999999999999999999999999999 77654 477899999887 3 59999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
|||.+++.+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||.+|++|+|+||++++ ++++
T Consensus 173 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~ 249 (391)
T 3h14_A 173 PTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP---EDQV 249 (391)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC---GGGH
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC---HHHH
Confidence 9999999999999999999999999999999 66655433322 2467899999999999999999999998 6788
Q ss_pred HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+.+........++.+.+.+.++.++++ ..+++++..+.+.++++.+.+.|++++...+..+.+++++|+.++....+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (391)
T 3h14_A 250 RVVERIAQNMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSR 328 (391)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHH
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHH
Confidence 888877777778889999999988888 4678889999999999999999988877555677778999999876444788
Q ss_pred HHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++.++++++||.+.||+.|+. ++++|++++. +++++++++++|.+++++...
T Consensus 329 ~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 329 AFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARGE 384 (391)
T ss_dssp HHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhcc
Confidence 8999888667999999998865 6799999997 889999999999999887554
No 7
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-47 Score=363.32 Aligned_cols=373 Identities=21% Similarity=0.344 Sum_probs=297.4
Q ss_pred hhHhHHhhccCchHHHHHH----HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
|.+++++.....+.+.... +...+|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 87 (412)
T 2x5d_A 8 ARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW 87 (412)
T ss_dssp -------------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred cchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 4566666654444444332 234568899999999998888999999999988654356787788899999999999
Q ss_pred HhhhcCC--CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890 81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (398)
Q Consensus 81 l~~~~~~--~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~ 156 (398)
+.+.+|. ++ ++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|+
T Consensus 88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~ 166 (412)
T 2x5d_A 88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV-PLVPGIDFFNELERAI 166 (412)
T ss_dssp HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEE-ECSTTSCHHHHHHHHH
T ss_pred HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHH
Confidence 9887764 56 699999999999999999999999999999999999999999999999998 77655 6667899999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---ccccc--CCcEEEEcccc
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---HCCVE--GDHVVNLFSFS 229 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~~~~~--~~~~i~~~s~s 229 (398)
+.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.. ..... .+++++++|+|
T Consensus 167 ~~i~~~--~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s 244 (412)
T 2x5d_A 167 RESIPK--PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS 244 (412)
T ss_dssp HTEESC--CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC
T ss_pred HhcccC--ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCc
Confidence 999865 489999999999999999999999999999999999999999 5554421 11111 36789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|.+|++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...+++++..+.++++++.+.+.|++++ +
T Consensus 245 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 320 (412)
T 2x5d_A 245 KSYNMAGWRIGFMVGN---PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W 320 (412)
T ss_dssp -CCSCTTSCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred cccCCcccceEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 9999999999999998 88888888776666788899999999999987667888889999999999999998774 3
Q ss_pred ccccCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 310 AVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+..+.+++|+|+.++... .+..+++.+|++++||.+.+|..|+ .++++||+++. +++++++++++|.++++++.
T Consensus 321 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp CCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred EecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence 6667777889999997432 1567888888766899999998885 36799999997 88999999999999998754
No 8
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=2.3e-47 Score=358.12 Aligned_cols=368 Identities=24% Similarity=0.354 Sum_probs=308.4
Q ss_pred cchhhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015890 2 GSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81 (398)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l 81 (398)
|..|..++|+.....+.++.+.+.... .++++|+.|.+++++++.+.+++.+.+... ...|++..+..++++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l 80 (386)
T 1u08_A 3 NNPLIPQSKLPQLGTTIFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKT 80 (386)
T ss_dssp --CCCCCCSCCCCCCCHHHHHHHHHHH-TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHH
T ss_pred CCCCccchhhhcCCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHH
Confidence 444555777776666777777666544 689999999998888999999999988653 467877778999999999999
Q ss_pred hhhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 82 NQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 82 ~~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
.+.+| ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+++.+|++.|++.
T Consensus 81 ~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~ 159 (386)
T 1u08_A 81 ERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAAL 159 (386)
T ss_dssp HHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHH
T ss_pred HHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-ecCcccCcCCHHHHHHh
Confidence 88766 4577 99999999999999999999999999999999999999999999999999 77655567899999999
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEEcccccc
Q 015890 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNLFSFSKA 231 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~~s~sK~ 231 (398)
++++ +++|++++|+||||.++|.+++++|+++|+++|+++|+||+| +.+++... ... ..++++++.|+||.
T Consensus 160 l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~ 237 (386)
T 1u08_A 160 LSER--TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKT 237 (386)
T ss_dssp CCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHH
T ss_pred hccc--CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhh
Confidence 9754 599999999999999999999999999999999999999999 66655321 111 24678999999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 311 (398)
+|++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...+++++..++++++++.+.+.|++.+. .+
T Consensus 238 ~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~ 313 (386)
T 1u08_A 238 YHMTGWKVGYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRL-EI 313 (386)
T ss_dssp TTCGGGCCEEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSC-EE
T ss_pred cCCcccceEEEEcC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCC-ee
Confidence 99899999999998 788888877665556788888999999999865677888899999999999999998754 67
Q ss_pred ccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
..+.+++++|++++... .+..++.+++++++||.+.||..|. .++++||+++. +++++++++++|.+
T Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 314 LPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp CCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred cCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 77777899999997531 3577888888777899999998774 46799999996 88999999998864
No 9
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3e-47 Score=363.31 Aligned_cols=370 Identities=25% Similarity=0.397 Sum_probs=309.1
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|......+.++++.+... ++++++|+.|.+... +++++.+++.+.+.+. ....|++..|..++|+.+++++.
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 132 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLG 132 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred hhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 677777777777888777654 578999999987543 6888999988887642 13578888899999999999997
Q ss_pred hhcCC-CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-
Q 015890 83 QENKL-YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE- 160 (398)
Q Consensus 83 ~~~~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~- 160 (398)
+.+++ ++++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++ +|++.|++.++
T Consensus 133 ~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~L~~~l~~ 209 (448)
T 3aow_A 133 KRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEG--MKVEILEEKLKE 209 (448)
T ss_dssp HHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHH
T ss_pred HhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHHhh
Confidence 77777 78899999999999999999999999999999999999999999999999998 776654 79999999997
Q ss_pred ---cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---cc-ccCCcEEEEccccc
Q 015890 161 ---TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CC-VEGDHVVNLFSFSK 230 (398)
Q Consensus 161 ---~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~-~~~~~~i~~~s~sK 230 (398)
+..++++|+ +++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... .. ...++++++.|+||
T Consensus 210 ~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK 289 (448)
T 3aow_A 210 LKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK 289 (448)
T ss_dssp HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTT
T ss_pred hhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchh
Confidence 522368875 6799999999999999999999999999999999999 66654321 11 12457899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhcc-CC
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP-LG 307 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~-~~ 307 (398)
.++ +|+|+||++++ +++++.+........++.+.+.|.++.++|+.. .+++++..+.++++++.+.+.|++ .+
T Consensus 290 ~~~-~GlriG~v~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 290 ILA-PGFRIGWMVGD---PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp TTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hcc-ccccEEEEEeC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999 99999999999 889988877766556778999999999999864 466788888888999999999986 45
Q ss_pred -CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 308 -EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
++.+..|.+++|+|++++.. .+..+++.+++ ++||.+.||..|. .++++|++++..+++++++++++|.++++
T Consensus 366 ~g~~~~~p~~g~~~~v~~~~~-~~~~~l~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 366 EGVKWTKPEGGMFIWVTLPDG-IDSKKMLERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp TTCEECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCccEEEEEEcCCC-CCHHHHHHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 45777778899999999753 36778888887 5699999998874 35799999997678999999999999998
Q ss_pred HHhc
Q 015890 383 ELVK 386 (398)
Q Consensus 383 ~~~~ 386 (398)
+..+
T Consensus 444 ~~~~ 447 (448)
T 3aow_A 444 EELK 447 (448)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7654
No 10
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.3e-47 Score=364.01 Aligned_cols=370 Identities=22% Similarity=0.350 Sum_probs=315.4
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
+.+++|+.....+.++++.+... +.++++|+.|.+++++||.+.+++.+.+.... ...|++..+..++++.+++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~ 82 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGE 82 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 34788888888888888877664 47999999999999999999999999887643 46788888999999999999998
Q ss_pred hcCC--CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-----------CCCC
Q 015890 84 ENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-----------KTLH 149 (398)
Q Consensus 84 ~~~~--~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~ 149 (398)
.++. ++ ++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. .++.
T Consensus 83 ~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~G~~~~~~~~~ 161 (422)
T 3fvs_A 83 LLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQ 161 (422)
T ss_dssp HHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCCCSSSCCBGGGSB
T ss_pred hhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEE-ecccccccccccccccCCC
Confidence 7774 45 689999999999999999999999999999999999999999999999988 7654 3467
Q ss_pred CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcE
Q 015890 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHV 222 (398)
Q Consensus 150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~ 222 (398)
+|++.+++.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.... .. ..+++
T Consensus 162 ~d~~~l~~~~~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (422)
T 3fvs_A 162 LDPMELAGKFTSR--TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT 239 (422)
T ss_dssp CCHHHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CCHHHHHhhcCCC--ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcE
Confidence 8999999999865 499999999999999999999999999999999999999999 666553221 11 23678
Q ss_pred EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRN 295 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~ 295 (398)
+++.|+||.+|++|+|+||++++ +++++.+.......+++.+.+.+.++..+++. ...++++..+.++++
T Consensus 240 i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 316 (422)
T 3fvs_A 240 LTIGSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316 (422)
T ss_dssp EEEEEHHHHHTCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred EEEecchhccCCccceEEEEEeC---HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999 78888888777666788899999999998873 356788899999999
Q ss_pred HHHHHHHhccCCCCccccCCccEEEEeeCCCCC---CC---------hHHHHHHHHHhcCeEEecCCCCC-------CCC
Q 015890 296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD---------DFEVVRWLAHRHGVVVIPGGACG-------CRG 356 (398)
Q Consensus 296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~ll~~~gi~v~~g~~~~-------~~~ 356 (398)
++.+.+.|++++. .+..+.+++|+|++++... .+ ..+++.++++++||.+.||+.|+ ..+
T Consensus 317 ~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~ 395 (422)
T 3fvs_A 317 RDHMIRSLQSVGL-KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH 395 (422)
T ss_dssp HHHHHHHHHTTTC-EEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred HHHHHHHHHHcCC-eecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence 9999999998854 7777888999999885310 01 55788888878999999999884 368
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 357 HLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
++||+++. +++++++++++|++++++
T Consensus 396 ~iRis~~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 396 YIRFCFVK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred eEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 99999997 999999999999988764
No 11
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-47 Score=365.47 Aligned_cols=358 Identities=21% Similarity=0.384 Sum_probs=302.5
Q ss_pred cCchHHHHHHHHHH--------cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890 14 TEMPIMVQIQELVR--------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 14 ~~~~~~~~~~~~~~--------~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~ 85 (398)
...+.|+.+.+... .++++++|+.|.+++++|+.+.+++.+++.+.....|++..|..++++++++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 112 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 44567777766652 6789999999999888899999999998875335678888899999999999998877
Q ss_pred CC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-----------CCCCCh
Q 015890 86 KL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-----------TLHPDA 152 (398)
Q Consensus 86 ~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~d~ 152 (398)
|. ++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ ++.+|+
T Consensus 113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~d~ 191 (447)
T 3b46_A 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYV-PINPPKELDQRNTRGEEWTIDF 191 (447)
T ss_dssp TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-EEECCGGGGTSCBCSTTSEECH
T ss_pred CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eCCCccccccccccccCcccCH
Confidence 64 56799999999999999999999999999999999999999999999999988 76543 467899
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cccc---cCCcEEEE
Q 015890 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCV---EGDHVVNL 225 (398)
Q Consensus 153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~---~~~~~i~~ 225 (398)
+.|++.++++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+| +.+++.. .... ..++++++
T Consensus 192 ~~l~~~l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i 269 (447)
T 3b46_A 192 EQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTV 269 (447)
T ss_dssp HHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEE
T ss_pred HHHHHhhccC--CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEE
Confidence 9999999854 599999999999999999999999999999999999999999 6665521 1112 24678999
Q ss_pred cccccccCCCcceeEEEEc-cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~ 302 (398)
.|+||.++++|+|+||+++ + +++++.+.......+++.+.+.+.++.++|+.. ++++++.++.++++++.+.+.
T Consensus 270 ~S~sK~~~~~G~riG~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (447)
T 3b46_A 270 GSAGKSFAATGWRIGWVLSLN---AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI 346 (447)
T ss_dssp EEHHHHTTCTTSCCEEEECSC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ecCchhcCCcchhhEEEEeCC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 7 788888877665567788999999999999864 456788889999999999999
Q ss_pred hccCCCCccccCCccEEEEeeCCCC--------------CCChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEEE
Q 015890 303 LSPLGEGAVKGGEGAIYLWARLPEK--------------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRIS 361 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~ 361 (398)
|++++. .+..+.+++|+|++++.. ..+..+++.+|++++||.+.||+.|+. ++++||+
T Consensus 347 L~~~g~-~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls 425 (447)
T 3b46_A 347 FDELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA 425 (447)
T ss_dssp HHHHTC-CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEE
T ss_pred HHHCCC-eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEE
Confidence 988754 667788899999998742 124567888887778999999987753 6899999
Q ss_pred ecCCCHHHHHHHHHHHHH
Q 015890 362 FGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 362 ~~~~~~~~~~~~~~~l~~ 379 (398)
++. +++++++++++|.+
T Consensus 426 ~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 426 VCK-DDAYLENAVERLKL 442 (447)
T ss_dssp CCS-CHHHHHHHHHHGGG
T ss_pred EeC-CHHHHHHHHHHHHH
Confidence 996 88999999999876
No 12
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=4.3e-47 Score=357.66 Aligned_cols=368 Identities=22% Similarity=0.371 Sum_probs=299.6
Q ss_pred hhHhHHhhcc--CchHHHHHHHHHH------cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHH
Q 015890 5 AKLAKRALET--EMPIMVQIQELVR------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPEL 73 (398)
Q Consensus 5 ~~~~~~~~~~--~~~~~~~~~~~~~------~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~ 73 (398)
|.+++|+... ..+.++++.+... +++++++|+.|.++++++|.+.+++.+.+.+.. ...|++..+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l 81 (398)
T 3ele_A 2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET 81 (398)
T ss_dssp CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence 5567777754 3445555433322 357899999999888889999999999886532 4678888899999
Q ss_pred HHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCC
Q 015890 74 RDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150 (398)
Q Consensus 74 ~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 150 (398)
++++++++.+.++ +++++|++|+|+++++..++.+++++| |+|+++.|+|+++...++..|.+++.+ +.+++++.+
T Consensus 82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~ 160 (398)
T 3ele_A 82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEV-PADTEHFQI 160 (398)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCTTTSSC
T ss_pred HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCCcCCcC
Confidence 9999999988876 568899999999999999999999999 999999999999999999999999999 887777889
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEeece--eccCCCc--cccccCC
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA------AGSWLVVDNTY--FMYDGRK--HCCVEGD 220 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~------~~~~livDe~~--~~~~~~~--~~~~~~~ 220 (398)
|+++|++.++++ +++|++++|+||||.+++.+++++|+++|++ +|+++|+||+| +.+++.. ......+
T Consensus 161 d~~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 238 (398)
T 3ele_A 161 DFDALEERINAH--TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD 238 (398)
T ss_dssp CHHHHHHTCCTT--EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS
T ss_pred CHHHHHHHhCcC--CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC
Confidence 999999999865 4999999999999999999999999999999 99999999999 6665532 2223357
Q ss_pred cEEEEcccccccCCCcceeEEEEccCCcH---HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVE---GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~---~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (398)
++++++|+||.+|++|+|+||+++++... .+.+.+...... .+.+.+.+.+.++..+++... ..+.+++++
T Consensus 239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~ 313 (398)
T 3ele_A 239 NTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----DINAYKENR 313 (398)
T ss_dssp SEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----CHHHHHHHH
T ss_pred CeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----HHHHHHHHH
Confidence 88999999999999999999999985321 133444333322 245677788888887777532 245667778
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 376 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 376 (398)
+++.+.|++++. .+..+.+++++|+.++.. +..++.+.| .++||.+.+|..|+.++++||+++ .+++++++++++
T Consensus 314 ~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~ 388 (398)
T 3ele_A 314 DLLYEGLTRIGY-HCFKPDGAFYMFVKALED--DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPA 388 (398)
T ss_dssp HHHHHHHHHHTC-CEECCSBSSEEEEECSSS--CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-eecCCCeeEEEEEEcCCC--CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHH
Confidence 888888877654 677788788899998753 577788766 589999999999988899999998 599999999999
Q ss_pred HHHHHHHHh
Q 015890 377 LRRGLEELV 385 (398)
Q Consensus 377 l~~~~~~~~ 385 (398)
|.++++++.
T Consensus 389 l~~~l~~~~ 397 (398)
T 3ele_A 389 FEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999998754
No 13
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-47 Score=360.09 Aligned_cols=371 Identities=22% Similarity=0.343 Sum_probs=308.4
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
|++++|+.....+.++.+.+...+ .++++|+.|.++++++|.+.+++.+.+.+. ...|++..+..++++.+++++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~ 78 (411)
T 2o0r_A 1 MATVSRLRPYATTVFAEMSALATR-IGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRH 78 (411)
T ss_dssp -CCCGGGGGGSSCHHHHHHHHHHT-TTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CchhhHhHhcCccHHHHHHHHhhc-CCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 556778887777788877766544 679999999998888999999999988763 467877888999999999999887
Q ss_pred cC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhh
Q 015890 85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTL 159 (398)
Q Consensus 85 ~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l 159 (398)
+| ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ ++.+|++.|++.+
T Consensus 79 ~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l 157 (411)
T 2o0r_A 79 FGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV-PLVPDGRGFALDADALRRAV 157 (411)
T ss_dssp HCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHHHC
T ss_pred cCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEe-eccccccCCCCCHHHHHHhh
Confidence 76 4577 99999999999999999999999999999999999999999999999988 77543 5678999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--c--cCCcEEEEccccccc
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--V--EGDHVVNLFSFSKAY 232 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~--~~~~~i~~~s~sK~~ 232 (398)
+++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... .. . ..++++++.|+||.+
T Consensus 158 ~~~--~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~ 235 (411)
T 2o0r_A 158 TPR--TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF 235 (411)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred ccC--ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc
Confidence 864 599999999999999999999999999999999999999999 55654321 11 1 145789999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...+++++..+.+.++++.+.+.|++.+. .+.
T Consensus 236 ~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 311 (411)
T 2o0r_A 236 NCTGWKIGWACGP---AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVH 311 (411)
T ss_dssp TCTTTCEEEEECC---HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTC-EEC
T ss_pred CCccceEEEEeeC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCC-Eec
Confidence 9999999999998 788888877665556777888898888888765677888889999999999999987754 666
Q ss_pred cCCccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCC-C------------CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC-G------------CRGHLRISFGGLVEDDCKAAADRLR 378 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~-~------------~~~~iRi~~~~~~~~~~~~~~~~l~ 378 (398)
.+.+++++|+.++.. ..+..+++.+|++++||.+.+|..| . .++++||+++. +++++++++++|.
T Consensus 312 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~ 390 (411)
T 2o0r_A 312 DSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIRRLS 390 (411)
T ss_dssp CCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHHHHG
T ss_pred CCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 777788999998742 1356788888876789999999877 2 24689999986 8899999999998
Q ss_pred HHHHHHh
Q 015890 379 RGLEELV 385 (398)
Q Consensus 379 ~~~~~~~ 385 (398)
+++++..
T Consensus 391 ~~~~~~~ 397 (411)
T 2o0r_A 391 VLAERPA 397 (411)
T ss_dssp GGGC---
T ss_pred HHHhccC
Confidence 8776544
No 14
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=9.7e-47 Score=352.56 Aligned_cols=343 Identities=22% Similarity=0.360 Sum_probs=292.9
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CC-cEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS-SVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~-~v~~~~g~t~a~~ 103 (398)
..|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++++++++.+.+|++ ++ +|++++|++++++
T Consensus 22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (376)
T 2dou_A 22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA 101 (376)
T ss_dssp HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 56789999999999888899999999998865435678665678999999999998877764 45 8999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
.++.+++++||+|+++.|+|+++...++..|.+++.+ +. ++++.+|++.+++.++++ +++|++++|+||||.+++.
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~-~~~~~~d~~~l~~~l~~~--~~~v~l~~p~nptG~~~~~ 177 (376)
T 2dou_A 102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLI-PL-REDGLADLKAVPEGVWRE--AKVLLLNYPNNPTGAVADW 177 (376)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEE-CB-CTTSSBCGGGSCHHHHHH--EEEEEECSSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEe-eC-CCCCCCCHHHHHHhhccC--ceEEEECCCCCCcCccCCH
Confidence 9999999999999999999999999999999999999 77 567778999999998754 4999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||.+|++|+|+||++++ +++++.+..
T Consensus 178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~ 254 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS---EEALARLER 254 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC---HHHHHHHHH
Confidence 99999999999999999999999 55554222211 2357899999999999899999999998 888888887
Q ss_pred hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHH
Q 015890 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 337 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (398)
.....+++.+.+.+.++.++++...+++++..+.++++++.+.+.|+++ +.+..+.+++|+|++++.. .+..++..+
T Consensus 255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 331 (376)
T 2dou_A 255 VKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEG-VDDLEFGLR 331 (376)
T ss_dssp HHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTT-CCHHHHHHH
T ss_pred HHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCC-CCHHHHHHH
Confidence 7666667788999999999998656778888899999999999999887 4666677788999999753 356788888
Q ss_pred HHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 338 LAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 338 ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
|+ ++||.+.+|..|+. ++++||+++. +++++++++++|.+++
T Consensus 332 l~-~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 332 LV-ERGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp HH-HTTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred HH-HCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 86 56999999988863 6899999996 8899999999998764
No 15
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.9e-47 Score=355.34 Aligned_cols=347 Identities=15% Similarity=0.227 Sum_probs=298.1
Q ss_pred HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHH
Q 015890 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (398)
Q Consensus 24 ~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a 101 (398)
.|..+|++++||+.|.++++++|.+.+++.+.+.+. ...|++ .+ .++++.+++++.+.++ +++++|++++|++++
T Consensus 17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 344578999999999999999999999999988764 467877 66 8999999999987776 457899999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ +|+++|++.+++++ +++++++|+||||.++
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~---~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~ 167 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFI-DATGG---INLHDVEKGFQAGA--RSILLCNPYNPLGMVF 167 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEE-ECTTS---CCHHHHHHHHHTTC--CEEEEESSBTTTTBCC
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEc-cCCCC---CCHHHHHHHhccCC--CEEEEeCCCCCCCCCC
Confidence 999999999999999999999999999999999999999 77654 79999999998765 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
+.+++++|+++|+++|+++|+||+| +.+.+ ...... ..++++++.|+||.+|++|+|+||++.++ +++++.
T Consensus 168 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~ 245 (377)
T 3fdb_A 168 APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEH 245 (377)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS--HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC--HHHHHH
Confidence 9999999999999999999999999 66655 222111 24678999999999999999999988754 788888
Q ss_pred HHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
+.......+++.+.+.+.++.++++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++.... ..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 324 (377)
T 3fdb_A 246 WQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTI-EGS 324 (377)
T ss_dssp HHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCC-CSC
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCC-CHH
Confidence 887766566788999999999999876677888999999999999999988 666688888878888999976322 256
Q ss_pred HHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
++..+++++||.+.||..|+. ++++||+++. +++++++++++|.+++++
T Consensus 325 ~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 325 PSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 777788677999999998864 6899999996 899999999999988764
No 16
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.3e-46 Score=350.45 Aligned_cols=361 Identities=27% Similarity=0.438 Sum_probs=300.3
Q ss_pred HhHHhhccCchHHHH----HHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQ----IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|+.....+.+++ ..+....|+++++|+.|.++++.++.+.+++.+.+... ...|++..+..++++.+++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence 345555444333333 33333467899999999998888999999999988654 3568777789999999999998
Q ss_pred hhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890 83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (398)
Q Consensus 83 ~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l 159 (398)
+.+|+ ++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.+
T Consensus 93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 171 (389)
T 1o4s_A 93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLL 171 (389)
T ss_dssp HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTC
T ss_pred HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhc
Confidence 87765 67899999999999999999999999999999999999999999999999999 7765 36778999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc--CCcEEEEcccccccC
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE--GDHVVNLFSFSKAYG 233 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~--~~~~i~~~s~sK~~~ 233 (398)
+++ +++|++++|+||||.++|.+++++|+++|+++|+++|+||+| +.+++.... ... .+++++++|+||.+|
T Consensus 172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~ 249 (389)
T 1o4s_A 172 VGK--TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS 249 (389)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred ccC--ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC
Confidence 865 489999999999999999999999999999999999999999 555442111 111 467899999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
++|+|+||++++ +++++.+........++.+.+.+.++..+|+.. +++..+.+.++++.+.+.|++++ +.+..
T Consensus 250 ~~G~r~G~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 322 (389)
T 1o4s_A 250 MTGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMG-VKFVE 322 (389)
T ss_dssp CGGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTT-CCCCC
T ss_pred CcccceEEEEeC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-Ceeec
Confidence 999999999998 788888877766556778889999998998764 57777888888999999998874 46666
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
+.+++++|+.++ .+..++.++|++++||.+.+|..|+.++++|++++. +++++++++++|.++++
T Consensus 323 ~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 323 PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN 387 (389)
T ss_dssp CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 777888998886 357788888866889999999888777899999996 89999999999988764
No 17
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=9.9e-47 Score=356.23 Aligned_cols=348 Identities=22% Similarity=0.318 Sum_probs=300.4
Q ss_pred CeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--C-CcEEEecChHHHHHHHH
Q 015890 31 NAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMVTAGANQAFVNIV 106 (398)
Q Consensus 31 ~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~-~~v~~~~g~t~a~~~~~ 106 (398)
.++||+.|++. ++++|.+++++.+.+.+.....|++..+..++++.+++++.+.++.+ + ++|++++|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 48999998755 78899999999998875434568888899999999999999888764 3 79999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-----CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
.+++++||+|+++.|+|+++...++..|.+++.+ +.+ ++++.+|++.|++.++++ +++|++++|+||||.++
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAFKAG--ARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EBCCCSSCCSSCCBCHHHHHHHHHTT--CCEEEEESSCTTTCCCC
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEe-ecccccccCcCCCcCHHHHHHHHhhC--CcEEEEcCCCCCCCccc
Confidence 9999999999999999999999999999999998 763 245678999999999875 48999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
+.+++++|+++|++||+++|+||+| +.+++..... ...++++++.|+||.+|++|+|+||++++ +++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~ 273 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS---RAIIA 273 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC---HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC---HHHHH
Confidence 9999999999999999999999999 5665533222 22567899999999999999999999998 88999
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
.+........++.+.+.+.++..+++...+++++..++++++++++.+.|++++++.+..+.+++++|+.++....+..+
T Consensus 274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (407)
T 3nra_A 274 RMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAE 353 (407)
T ss_dssp HHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred HHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHH
Confidence 88877776777888888988888887655778888899999999999999988766777788789999999864457788
Q ss_pred HHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 334 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+...|++++||.+.+|..|+ .++++||+++. +++++++++++|.++++++.
T Consensus 354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence 88888767899999998886 46899999997 89999999999999998754
No 18
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-46 Score=355.30 Aligned_cols=370 Identities=26% Similarity=0.389 Sum_probs=304.9
Q ss_pred HhHHhhccCchHHH---HHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890 7 LAKRALETEMPIMV---QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
+++|+.....+... ...+...+|+++++|+.|.+ +++.++.+.+++.+.+.+. ...|++..+..++++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~ 90 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVER 90 (406)
T ss_dssp CCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred HHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence 46666654444333 34455667899999999998 7788899999999888654 34687777889999999999
Q ss_pred HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (398)
Q Consensus 81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~ 157 (398)
+.+.++ +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++
T Consensus 91 l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~ 169 (406)
T 1xi9_A 91 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRK 169 (406)
T ss_dssp HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHHHH
T ss_pred HHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCCCcCCcCCHHHHHH
Confidence 988765 457899999999999999999999999999999999999999999999999988 7664 467789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCc-EEEEccccccc
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDH-VVNLFSFSKAY 232 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~-~i~~~s~sK~~ 232 (398)
.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++...... ..++ +++++|+||.+
T Consensus 170 ~l~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (406)
T 1xi9_A 170 KITDR--TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY 247 (406)
T ss_dssp HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT
T ss_pred hhCcC--ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc
Confidence 99865 599999999999999999999999999999999999999999 55533222111 1466 89999999999
Q ss_pred CCCcceeEEEE--ccCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 233 GMMGWRVGYIA--YPSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 233 ~~~G~r~G~i~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
|++|+|+||++ .+ + ++++.+....... ++.+.+.+.++.++|+...+++++..+.+.++++.+.+.|+++
T Consensus 248 ~~~G~r~G~~~~~~~---~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 248 FATGWRLGYMYFVDP---ENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp CCGGGCCEEEEEECT---TCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCccEEEEEEEecC---chhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98999999999 77 6 8888887666544 7788899999999996555667888899999999999999888
Q ss_pred CCCccccCCccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+++.+..+.+++++|+.++.. ..+..+++++|++++||.+.+|..|+. ++++||+++ .+++++++++++|.+++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp TTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence 655666777788888887641 235778888887688999999988864 789999999 6899999999999999887
Q ss_pred Hh
Q 015890 384 LV 385 (398)
Q Consensus 384 ~~ 385 (398)
+.
T Consensus 403 ~~ 404 (406)
T 1xi9_A 403 RL 404 (406)
T ss_dssp C-
T ss_pred Hh
Confidence 54
No 19
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.7e-46 Score=357.12 Aligned_cols=366 Identities=22% Similarity=0.363 Sum_probs=306.1
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
+++|+.......+..+.+... ..++++|+.|.+++++++.+.+++.+.+... ....|++..+..++++++++++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~ 93 (429)
T 1yiz_A 15 LPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQL 93 (429)
T ss_dssp SSSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHH
T ss_pred hhHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHH
Confidence 456666666666766665543 4689999999998888999999999988652 2457877778999999999999887
Q ss_pred cC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC---------CCCCCh
Q 015890 85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDA 152 (398)
Q Consensus 85 ~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~ 152 (398)
+| ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ ++.+|+
T Consensus 94 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~ 172 (429)
T 1yiz_A 94 VDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVLDN 172 (429)
T ss_dssp HTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCSSSSEEGGGCBCCH
T ss_pred hCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCcccccccccccCcccCH
Confidence 76 5677 99999999999999999999999999999999999999999999999988 77654 467899
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEE
Q 015890 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNL 225 (398)
Q Consensus 153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~ 225 (398)
+.|++.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.+. ... ..++++++
T Consensus 173 ~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 250 (429)
T 1yiz_A 173 NELEALFNEK--TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250 (429)
T ss_dssp HHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred HHHHHHhccC--ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence 9999999754 599999999999999999999999999999999999999999 66654321 111 24678999
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-----C--chHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----G--PEWVTERVKDLVRNREI 298 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~--~~~~~~~~~~~~~~~~~ 298 (398)
.|+||.+|++|+|+||++++ +++++.+.......+++.+.+.+.++.++|+. . .+++++..+.++++++.
T Consensus 251 ~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (429)
T 1yiz_A 251 GSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY 327 (429)
T ss_dssp EEHHHHHTCGGGCCEEEESC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred ecchhccCCCCcceEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999899999999998 78888887776666788899999999999886 5 57788888999999999
Q ss_pred HHHHhccCCCCccccCCccEEEEeeCCCCC-----------CChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEE
Q 015890 299 IREALSPLGEGAVKGGEGAIYLWARLPEKH-----------LDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRI 360 (398)
Q Consensus 299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi 360 (398)
+.+.|++.+. .+..+.+++|+|++++... .+..+++.+|++++||.+.||..|.. ++++||
T Consensus 328 l~~~L~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi 406 (429)
T 1yiz_A 328 MASFLAEVGM-NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY 406 (429)
T ss_dssp HHHHHHHHTC-EEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred HHHHHHhCCC-cccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence 9999987754 6666777899999987531 24567788787689999999987752 679999
Q ss_pred EecCCCHHHHHHHHHHHHHHH
Q 015890 361 SFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 361 ~~~~~~~~~~~~~~~~l~~~~ 381 (398)
+++. +++++++++++|.+++
T Consensus 407 s~~~-~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 407 CFFK-KDENLQKAAEILRKWK 426 (429)
T ss_dssp ECCS-CHHHHHHHHHHHHHHS
T ss_pred EecC-CHHHHHHHHHHHHHhc
Confidence 9996 8999999999998765
No 20
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-46 Score=351.49 Aligned_cols=352 Identities=18% Similarity=0.234 Sum_probs=299.2
Q ss_pred HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890 25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (398)
Q Consensus 25 ~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~ 102 (398)
|...|+++++|+.|.+++++||.+.+++.+.+.+. ...|++. ..++++.+++++.+.++ +++++|++++|+++++
T Consensus 22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 34567899999999999999999999999988764 4566554 68999999999999887 6788999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
+.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+ +..+.+|++.|++.++... +++|++++|+||||.+
T Consensus 99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~-~~~v~i~~p~nptG~~ 176 (391)
T 3dzz_A 99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS-DLIYENSKYSVNWADLEEKLATPS-VRMMVFCNPHNPIGYA 176 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTSTT-EEEEEEESSBTTTTBC
T ss_pred HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEe-eeeecCCceeecHHHHHHHHhccC-ceEEEEECCCCCCCcc
Confidence 99999999999999999999999999999999999998 774 3345689999999998322 5999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---ccc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
++.+++++|+++|+++|+++|+||+| +.+.+.... ... .++++++.|+||.+|++|+|+||+++++ ++++
T Consensus 177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~ 254 (391)
T 3dzz_A 177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN--PDLR 254 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS--HHHH
T ss_pred cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC--HHHH
Confidence 99999999999999999999999999 666543221 111 4578999999999999999999999975 6788
Q ss_pred HHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCC
Q 015890 253 TQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLD 330 (398)
Q Consensus 253 ~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
+.+..... ...++.+.+.+.++..+++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++....+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (391)
T 3dzz_A 255 ARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMN 334 (391)
T ss_dssp HHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSC
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCC
Confidence 88776643 234678889999999888875677888999999999999999988 7777888888888889998754346
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..++..+|++++||.+.+|..|+. ++++|++++. +++++++++++|.++++++
T Consensus 335 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 335 AEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 788888886689999999998865 4899999995 8999999999999998764
No 21
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=3.2e-46 Score=349.72 Aligned_cols=360 Identities=26% Similarity=0.388 Sum_probs=296.5
Q ss_pred hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~ 84 (398)
|++++|+.....+.++.+.+.... +++++|+.|.+++++++.+.+++.+.+.+ ...|++..+..++++.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~--- 74 (381)
T 1v2d_A 1 MRLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF--- 74 (381)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred CchhhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc---
Confidence 456777777666667776666544 67999999999888899999999998865 456877778999999999996
Q ss_pred cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccC
Q 015890 85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK 162 (398)
Q Consensus 85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~ 162 (398)
+.++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+ .+++.+|++.|++.++++
T Consensus 75 -~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred -CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCCCCccCCcCHHHHHHhcCcC
Confidence 6777889999999999999999999999999999999999999999999999998 776 344678999999999765
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-cccc--cCCcEEEEcccccccCCCcc
Q 015890 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCV--EGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~--~~~~~i~~~s~sK~~~~~G~ 237 (398)
+++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+ +.. .... ..++++++.|+||.+|++|+
T Consensus 153 --~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 229 (381)
T 1v2d_A 153 --TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGY 229 (381)
T ss_dssp --EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGG
T ss_pred --CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCccc
Confidence 599999999999999999999999999999999999999999 544 321 1111 35688999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 315 (398)
|+||++++ +++++.+.......+++.+.+.+.++..+|+.. .+++++..++++++++++.+.|++.+. .+..+.
T Consensus 230 r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~ 305 (381)
T 1v2d_A 230 RVGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL-RVYVPE 305 (381)
T ss_dssp CCEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTC-CEECCS
T ss_pred ceEEEEeC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCC-EecCCC
Confidence 99999998 677777766655556788899999988888754 467788889999999999999988654 677777
Q ss_pred ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++|+.++.. + +.++++++||.+.+|..|.. ++++||+++. +++++++++++|.+++++..+
T Consensus 306 ~~~~~~~~~~~~--~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 306 GTYFLMAELPGW--D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp BSSEEEEECTTC--C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred cceEEEEecChH--h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence 788999998753 2 44566789999999988753 6799999997 899999999999999877654
No 22
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1e-45 Score=346.45 Aligned_cols=345 Identities=18% Similarity=0.279 Sum_probs=294.0
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~ 105 (398)
+++++++|+.|.+++++||++.+++.+.+.+. ...|++. ..++++++++++.+.++ +++++|++++|++++++.+
T Consensus 22 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 98 (383)
T 3kax_A 22 KNEELIHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp SSSCCEECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCCCeeecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 46899999999999999999999999988764 4567544 57899999999999887 6788999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-C-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-K-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
+.+++++||+|+++.|+|+++...++..|.+++.+ +.+. + ++.+|++.|++.++++ +++|++++|+||||.+++.
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~--~~~v~i~~p~nptG~~~~~ 175 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVS-PLQKQNDTYAIDFEHLEKQFQQG--VKLMLLCSPHNPIGRVWKK 175 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTTT--CCEEEEESSBTTTTBCCCH
T ss_pred HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cceecCCcEEEcHHHHHHHhCcC--CeEEEEeCCCCCCCcCcCH
Confidence 99999999999999999999999999999999998 7653 2 3568999999999655 4999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCccc---ccc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+++++|+++|+++|+++|+||+| +.+.+.... ... .++++++.|+||.+|++|+|+||+++++ +++++.+
T Consensus 176 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~ 253 (383)
T 3kax_A 176 EELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN--EKLRQAF 253 (383)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC--HHHHHHH
Confidence 99999999999999999999999 666553221 111 3678999999999999999999999854 7888888
Q ss_pred HHhhccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 256 LKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 256 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
....... .++.+.+.+.++..+++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++....+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (383)
T 3kax_A 254 TSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDE 333 (383)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHH
Confidence 7665543 3478999999999999876677888889999999999999987 6666888888888888998754346788
Q ss_pred HHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
+...|++++||.+++|..|+. ++++|++++. +++++++++++|.+++
T Consensus 334 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 334 RTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 888887678999999998864 5899999996 8899999999998875
No 23
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.3e-45 Score=344.10 Aligned_cols=352 Identities=24% Similarity=0.404 Sum_probs=293.6
Q ss_pred hHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 8 AKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
++|+.....+.++++.+. ...|+++++|+.|.+++++|+.+.+++.+.+.+. ...|++..+..++++.+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 3 SKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence 455555444444443333 3357899999999998888999999999988654 45787778899999999999988
Q ss_pred hcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 84 ~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
.++ +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ + +|++.|++.+++
T Consensus 82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~-------~d~~~l~~~l~~ 153 (370)
T 2z61_A 82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFC-D-------FTVESLEEALSD 153 (370)
T ss_dssp HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-C-------SSHHHHHHHCCS
T ss_pred HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-C-------CCHHHHHHhccc
Confidence 776 567899999999999999999999999999999999999999999999999988 5 589999999986
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCC
Q 015890 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~ 235 (398)
+ +++|++++|+||||.+++.+ |.++|+++|+++|+||+| +.+++...... ..+++++++|+||.+|++
T Consensus 154 ~--~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 227 (370)
T 2z61_A 154 K--TKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMT 227 (370)
T ss_dssp S--EEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred C--ceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCc
Confidence 4 58999999999999999954 999999999999999999 55554322221 246789999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
|+|+||++++ +++++.+........++.+.+.+.++.++|+. ...++++..+.++++++.+.+.|++++ +.+..+
T Consensus 228 G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~ 303 (370)
T 2z61_A 228 GWRIGYVISN---DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG-WEVNNP 303 (370)
T ss_dssp GGCCEEEECC---HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCCCC
T ss_pred cceEEEEEEC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CeecCC
Confidence 9999999999 78888887776666678899999999888875 456778888899999999999998874 466677
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.+++++|+.++. +..++..+|++++||.+.+|..|+. ++++|++++ .+++++++++++|.++++
T Consensus 304 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 304 IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 778889988875 5778888886678999999988863 689999999 489999999999988764
No 24
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.4e-46 Score=352.89 Aligned_cols=362 Identities=22% Similarity=0.352 Sum_probs=304.9
Q ss_pred HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-
Q 015890 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL- 87 (398)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~- 87 (398)
+|+...+.+.++++.+.. .+.++++|+.|.+++++|+.+.+++.+.+.+.....|++..+..++++.+++++.+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~ 81 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQ 81 (410)
T ss_dssp GGGTTCCCCHHHHTTTTT-TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSC
T ss_pred hhhccCCccHHHHHHHHh-cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCC
Confidence 455566667777776543 457899999999999999999999999987654567888888999999999999887764
Q ss_pred -CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC----------CCCCCChHHH
Q 015890 88 -YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS----------KTLHPDADWL 155 (398)
Q Consensus 88 -~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~d~e~l 155 (398)
++ ++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. .++.+|++++
T Consensus 82 ~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~d~~~l 160 (410)
T 3e2y_A 82 IDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPREL 160 (410)
T ss_dssp CCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECCCCSSCCBGGGEECCHHHH
T ss_pred CCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-eccccccccccccccCCcCCHHHH
Confidence 46 799999999999999999999999999999999999999999999999888 6542 3456899999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEccc
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFSF 228 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s~ 228 (398)
++.++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.... .. ..++++++.|+
T Consensus 161 ~~~~~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 238 (410)
T 3e2y_A 161 ESKFSSK--TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSA 238 (410)
T ss_dssp HTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEH
T ss_pred HhhcCCC--ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecc
Confidence 9999765 599999999999999999999999999999999999999999 666553221 11 23678999999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHHHHHHHH
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREIIRE 301 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l~~ 301 (398)
||.+|++|+|+||++++ +++++.+.......+++.+.+.+.++..+++. ...++++..+.++++++.+.+
T Consensus 239 sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 315 (410)
T 3e2y_A 239 GKTFSVTGWKLGWSIGP---AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVR 315 (410)
T ss_dssp HHHSSCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCceEEEEEEC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 78888888777766788899999999998862 346788889999999999999
Q ss_pred HhccCCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEEEecC
Q 015890 302 ALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFGG 364 (398)
Q Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~ 364 (398)
.|++++. .+..+.+++|+|+++..... +..+++.++++++||.+.||+.|+. .+++||+++.
T Consensus 316 ~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~ 394 (410)
T 3e2y_A 316 LLNSVGL-KPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK 394 (410)
T ss_dssp HHHTTTC-EEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC
T ss_pred HHHHCCC-eecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC
Confidence 9998854 77778889999998854211 1247888888889999999998853 5899999997
Q ss_pred CCHHHHHHHHHHHHH
Q 015890 365 LVEDDCKAAADRLRR 379 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~ 379 (398)
+++++++++++|++
T Consensus 395 -~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 -KDSTLDAAEEIFRA 408 (410)
T ss_dssp -CHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHh
Confidence 99999999999875
No 25
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.4e-45 Score=345.07 Aligned_cols=367 Identities=22% Similarity=0.320 Sum_probs=303.9
Q ss_pred HhHHhhccCc----hHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
++.|+..... ..+....+...+|+++++|+.|.+++++++.+.+++ +.+.+. ...|++..+..++++.+++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~ 93 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYK 93 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHH
Confidence 5777765443 334444555567889999999999888889999999 887653 4578777889999999999998
Q ss_pred hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890 83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (398)
Q Consensus 83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l 159 (398)
+.++ +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+ ++.|++.+
T Consensus 94 ~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~-~~~l~~~l 171 (409)
T 2gb3_A 94 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAI-PQNLESFI 171 (409)
T ss_dssp HTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCC-CTTGGGGC
T ss_pred HHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ccCCCCCCcc-HHHHHHhh
Confidence 8766 456899999999999999999999999999999999999999999999999998 7764 45555 88999998
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCC
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~ 235 (398)
+++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++...... ..+++++++|+||.+|++
T Consensus 172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 249 (409)
T 2gb3_A 172 NER--TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSAC 249 (409)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCG
T ss_pred CcC--CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCc
Confidence 764 599999999999999999999999999999999999999999 55544222212 145789999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccC
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGG 314 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~ 314 (398)
|+|+||+++++ +++++.+........ +.+.+.+.++.++|+....++++..+.+.++++.+.+.|++++. .+ ..+
T Consensus 250 G~r~G~~~~~~--~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~ 325 (409)
T 2gb3_A 250 GARVGCLITRN--EELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGL-KRFTKP 325 (409)
T ss_dssp GGCCEEEECSC--HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCBCCC
T ss_pred cceEEEEEECc--HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCc-eeeeCC
Confidence 99999999993 388888877665555 78899999999999765667888888999999999999988754 55 667
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHh-----cCeEEecCCCCCC-----CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++++|+.++ ..+..++..+|+++ +||.+.+|..|+. ++++|++++ .+++++++++++|.++++++
T Consensus 326 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 326 SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 77889998887 23677888888754 4999999987753 679999999 58999999999999999887
Q ss_pred hc
Q 015890 385 VK 386 (398)
Q Consensus 385 ~~ 386 (398)
..
T Consensus 403 ~~ 404 (409)
T 2gb3_A 403 CS 404 (409)
T ss_dssp HC
T ss_pred hh
Confidence 54
No 26
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.3e-45 Score=347.68 Aligned_cols=349 Identities=18% Similarity=0.284 Sum_probs=292.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+++++|+.|.++++++|.+.+++.+.+.+. ...|++. ..++++++++++.+.++ +++++|++++|+++++..++.
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~ 107 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVR 107 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence 489999999998888999999999987643 4567554 79999999999988777 667899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
+++++||+|+++.|+|+++...++..|.+++.+ +.+ ++ ++.+|++.|++.++... +++|++++|+||||.++|.++
T Consensus 108 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~-~~~v~~~~~~nptG~~~~~~~ 185 (399)
T 1c7n_A 108 EFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDKN-NKALLFCSPHNPVGRVWKKDE 185 (399)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCTT-EEEEEEESSBTTTTBCCCHHH
T ss_pred HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEec-ccccCCCCEEEcHHHHHHHhccCC-CcEEEEcCCCCCCCcCcCHHH
Confidence 999999999999999999999999999999988 764 33 35689999999998322 599999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--cc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+++|+++|+++|+++|+||+| +.+++... .. .. .++++++.|+||.+|++|+|+||+++++ +++++.+..
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~l~~ 263 (399)
T 1c7n_A 186 LQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN--PDIRERFTK 263 (399)
T ss_dssp HHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC--HHHHHHHHH
Confidence 999999999999999999999 66655321 11 11 3678999999999999999999999874 568888877
Q ss_pred hhccCCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890 258 VQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 258 ~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
....+.+ +.+.+.+.++.++++...+++++..+.+.++++.+.+.|++ ++++.+..+.+++++|+.++....+..++.
T Consensus 264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (399)
T 1c7n_A 264 SRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAME 343 (399)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHH
T ss_pred HHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHH
Confidence 6654443 67889999988888765567888888999999999999987 766677778878888899874223577888
Q ss_pred HHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 336 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+|++++||.+.||..|+ .++++||+++. .++++++++++|.++++++.+
T Consensus 344 ~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 344 EFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp HHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHHHh
Confidence 888657899999998876 46899999997 588999999999999988754
No 27
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-45 Score=343.22 Aligned_cols=333 Identities=14% Similarity=0.155 Sum_probs=287.9
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~ 105 (398)
+| ++++|+.|.+++++||.+.+++.+.+.. ...|++..+..++++.+++++.+.+++ ++++|++|+|+++++..+
T Consensus 22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~ 98 (376)
T 3ezs_A 22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNF 98 (376)
T ss_dssp SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHH
T ss_pred cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHH
Confidence 45 8999999999999999999999988733 567888888999999999999888876 788999999999999999
Q ss_pred HHHhccC--CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890 106 VLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 106 ~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~ 182 (398)
+.+++++ ||+|+++.|+|+++...++..|.+++.+ +.+++ ++ ++ .+++.+.++ +++|++++|+||||.+++
T Consensus 99 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~--~~-~l~~~~~~~--~~~v~~~~p~nptG~~~~ 172 (376)
T 3ezs_A 99 PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM-PLTKENDF--TP-SLNEKELQE--VDLVILNSPNNPTGRTLS 172 (376)
T ss_dssp HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTS--CC-CCCHHHHHH--CSEEEECSSCTTTCCCCC
T ss_pred HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEc-ccCCCCCc--ch-hHHhhhccC--CCEEEEcCCCCCcCCCCC
Confidence 9999999 9999999999999999999999999999 77654 44 33 566666654 489999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc---------cCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~---------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
.+++++|+++|+++|+++|+||+| +.+++...... ..++++++.|+||.+|++|+|+||++.+ +++
T Consensus 173 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~ 249 (376)
T 3ezs_A 173 LEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD---SRL 249 (376)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC---HHH
T ss_pred HHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC---HHH
Confidence 999999999999999999999999 66655332221 4678899999999999999999999998 889
Q ss_pred HHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890 252 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
++.+.......+++.+.+.+.++.++++. .+++++..+.+.++++.+.+.|+ +. . .+.+++|+|++++ +.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~--~~-~--~~~~~~~~~~~~~----~~ 319 (376)
T 3ezs_A 250 LEKYKAFRAYLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK--NT-L--IYPYSFYVYLPVQ----NG 319 (376)
T ss_dssp HHHHHHHHTTTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST--TC-C--CCSBSSEEEEECS----CH
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc--CC-C--CCCcceEEEEECC----CH
Confidence 99998877767788999999999999986 56788889999999999999998 33 3 5666899999987 47
Q ss_pred HHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+++.+|++++||.+.||..|+ .++++||+++. +++++++++++|.+++++
T Consensus 320 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 320 ENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 7888888755899999999886 46899999986 899999999999988754
No 28
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.1e-45 Score=349.01 Aligned_cols=362 Identities=19% Similarity=0.226 Sum_probs=296.7
Q ss_pred HHHHHHHH----HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCC
Q 015890 19 MVQIQELV----RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYK 89 (398)
Q Consensus 19 ~~~~~~~~----~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~ 89 (398)
++.+.+.. ..++++++|+.|.+. +++++.+.+++.+.+.......|++..+..++++.+++++.+.. .+++
T Consensus 39 i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~ 118 (427)
T 3dyd_A 39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEA 118 (427)
T ss_dssp --------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCG
T ss_pred HHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCCh
Confidence 45554433 235678999999864 57899999999998876556689888999999999999996541 2467
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEE
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
++|++|+|+++|++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ .++.+|++.+++.+++++ ++|
T Consensus 119 ~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~--~~v 195 (427)
T 3dyd_A 119 KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLY-NLLPEKSWEIDLKQLEYLIDEKT--ACL 195 (427)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHSSCCTTE--EEE
T ss_pred HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC--CEE
Confidence 899999999999999999999999999999999999999999999999988 6543 456789999999998754 899
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEE
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYI 242 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i 242 (398)
++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++..... ....++++++|+||.|+++|+|+||+
T Consensus 196 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~ 275 (427)
T 3dyd_A 196 IVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWI 275 (427)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEE
Confidence 99999999999999999999999999999999999999 6665533211 12345788999999999999999999
Q ss_pred EccCCc----HHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 243 AYPSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 243 ~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
++++.. +++++.+...... +++++.+.+.++.++|+. ..+++++..+.++++++.+.+.|++++++.+..+.++
T Consensus 276 ~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g 354 (427)
T 3dyd_A 276 LIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGA 354 (427)
T ss_dssp EEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBT
T ss_pred EecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence 987421 2466666555432 577899999999999984 3577888889999999999999998866677778889
Q ss_pred EEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 318 IYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 318 ~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+|+|+.++.. ..+..+++.+|++++||.+.||..|+.++++||+++ .+++++++++++|.++++++.
T Consensus 355 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 355 MYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp TEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHHHHHhh
Confidence 9999887621 135678888888789999999999988999999998 589999999999999998764
No 29
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.1e-44 Score=342.30 Aligned_cols=370 Identities=24% Similarity=0.358 Sum_probs=300.7
Q ss_pred HhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHH
Q 015890 7 LAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALV 78 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~ 78 (398)
+++|+.....+.++++.+... .|++++||+.|.++.. +++.+.+++.+.+.+. ... |++..+..++++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la 85 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA 85 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence 566776666566666555443 3568999999876543 6789999998887642 134 877788999999999
Q ss_pred HHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHH
Q 015890 79 KKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (398)
Q Consensus 79 ~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 156 (398)
+++.+.+| +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++ +|++.|+
T Consensus 86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~ 162 (407)
T 2zc0_A 86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGV-PVDNDG--MRVDLLE 162 (407)
T ss_dssp HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHH
T ss_pred HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEc-ccCCCC--CCHHHHH
Confidence 99988777 567899999999999999999999999999999999999999999999999988 776554 7999999
Q ss_pred Hhhc----cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-cCCcEEEE
Q 015890 157 KTLE----TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-EGDHVVNL 225 (398)
Q Consensus 157 ~~l~----~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~~~~~i~~ 225 (398)
+.++ +...+++|+ +++|+||||.++|.+++++|+++|+++|+++|+||+| +.+++.... .. ..++++++
T Consensus 163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (407)
T 2zc0_A 163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA 242 (407)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence 9997 522358874 6789999999999999999999999999999999999 555443211 11 23578999
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--c-hHHHHHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--P-EWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~l~~~ 302 (398)
+|+||.++ +|+|+||++++ +++++.+........++.+.+.+.++..+++.. . .++++..+.++++++.+.+.
T Consensus 243 ~s~sK~~~-~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (407)
T 2zc0_A 243 GTLSKVLG-TGFRIGWIIAE---GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKA 318 (407)
T ss_dssp EESTTTTC-TTSCCEEEECC---HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHH
T ss_pred cccccccC-CCcceEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999998 788888887776666777899999999999864 2 45667778888889999988
Q ss_pred hcc-CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHH
Q 015890 303 LSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 303 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
|++ .+.+.+..+.+++++|+.++.. .+..++.+.|++++||.+.+|..|. .++++||+++..+++++++++++|
T Consensus 319 L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l 397 (407)
T 2zc0_A 319 LENHLPNAEFTKPIAGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397 (407)
T ss_dssp HHHHCTTSCBCCCSBSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHH
T ss_pred HHHhCCCCEEecCCCcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 876 4545666677789999999753 3677888888744499999998774 357999999976789999999999
Q ss_pred HHHHHHHh
Q 015890 378 RRGLEELV 385 (398)
Q Consensus 378 ~~~~~~~~ 385 (398)
.++++++.
T Consensus 398 ~~~l~~~~ 405 (407)
T 2zc0_A 398 AKLYKEKF 405 (407)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998764
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.2e-44 Score=340.04 Aligned_cols=344 Identities=17% Similarity=0.263 Sum_probs=292.2
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~ 105 (398)
.++++++|+.|.+++++||.+.+++.+.+.+. .+.|++ +..++++++++++.+.++ +++++|++++|++++++.+
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 106 (391)
T 4dq6_A 30 GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLL 106 (391)
T ss_dssp SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHH
Confidence 36889999999999999999999999988753 345644 558999999999999888 6788999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--C-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~ 182 (398)
+.+++++||+|+++.|+|+++...++..|.+++.+ +.+ . .++.+|++++++.+++ +++|++++|+||||.+++
T Consensus 107 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~d~~~l~~~l~~---~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 107 INELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS-PLQKLENGNYIMDYEDIENKIKD---VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEEC-CCEECTTSCEECCHHHHHHHCTT---EEEEEEESSBTTTTBCCC
T ss_pred HHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEee-eeeecCCCceEeeHHHHHHHhhc---CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999998 766 2 3466899999999987 499999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
.+++++|+++|+++|+++|+||+| +.+.+..... .. .++++++.|+||.+|++|+|+||+++++ +++++.
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~ 260 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD--EKDYKL 260 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC--HHHHHH
Confidence 999999999999999999999999 6665532211 11 2577999999999999999999999884 578888
Q ss_pred HHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChH
Q 015890 255 LLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 255 l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+...... ..++.+.+.+.++..+++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++....+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
T 4dq6_A 261 LDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDE 340 (391)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHH
T ss_pred HHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHH
Confidence 7766443 34578889999999888865677888899999999999999987 666688888888888899875334678
Q ss_pred HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
++...|++++||.++||..|+. ++++|++++. +++++++++++|.+++
T Consensus 341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 341 ELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 8888887445999999988864 4899999995 8899999999998876
No 31
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=7.8e-45 Score=341.33 Aligned_cols=346 Identities=16% Similarity=0.245 Sum_probs=286.2
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHH-HHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPE-LRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~-~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~ 106 (398)
+++++|+.|.+++++||.+.+++.+.+... ...|++. ..+ +|+++++++.+.++ +++++|++++|++++++.++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~ 104 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELI 104 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHH
Confidence 479999999998889999999999988653 4567554 678 99999999988777 66889999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ .+.+|++.|++.+++.. +++|++++|+||||.+++.+
T Consensus 105 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~~-~~~v~l~~p~nptG~~~~~~ 182 (390)
T 1d2f_A 105 RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKPE-CKIMLLCSPQNPTGKVWTCD 182 (390)
T ss_dssp HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTSTT-EEEEEEESSCTTTCCCCCTT
T ss_pred HHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEe-ecccCCCccccCHHHHHHHhccCC-CeEEEEeCCCCCCCcCcCHH
Confidence 9999999999999999999999999999999988 76543 35689999999998532 59999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece--eccCCCcccc---ccCCc-EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~~~-~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
++++|+++|+++|+++|+||+| +.+++..... ...+. .. +.|+||.+|++|+|+||+++++ +++++.+...
T Consensus 183 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~~~ 259 (390)
T 1d2f_A 183 ELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSA 259 (390)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS--HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC--HHHHHHHHHH
Confidence 9999999999999999999999 6665432211 11111 34 8999999999999999999864 6788877766
Q ss_pred hc-cCCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890 259 QD-NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 259 ~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
.. ..++ +.+.+.+.++.++++...+++++..+.++++++.+.+.|++ ++++.+..+.+++++|+.++....+..++.
T Consensus 260 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 339 (390)
T 1d2f_A 260 LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 339 (390)
T ss_dssp HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred HhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence 54 3444 77889998888888765567888888999999999999987 666677778877888899874323577888
Q ss_pred HHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 336 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 336 ~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
..|++++||.+.+|..|+ .++++||+++. +++++++++++|.++++++
T Consensus 340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 888657899999998885 46899999997 6889999999999998764
No 32
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.2e-45 Score=348.43 Aligned_cols=345 Identities=17% Similarity=0.237 Sum_probs=293.2
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~ 106 (398)
|+++++|+.|+++++++|.+.+++.+.+.+. .+.|+... .++++++++++.+.++ +++++|++++|+++|++.++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~ 136 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNYFN--DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIAL 136 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHH
Confidence 7899999999999999999999999988653 45565433 8999999999999887 66889999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPE 183 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~ 183 (398)
.+++++||+|+++.|+|+++...++..|.+++.+ +.+ +.++.+|++.|+++++ ++ +++|++++|+||||.++++
T Consensus 137 ~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~le~~i~~~~--~~~vil~~p~nptG~~~~~ 213 (421)
T 3l8a_A 137 QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN-SLQIINGRFEIDFEQLEKDIIDNN--VKIYLLCSPHNPGGRVWDN 213 (421)
T ss_dssp HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEE-ECEEETTEEECCHHHHHHHHHHTT--EEEEEEESSBTTTTBCCCH
T ss_pred HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEec-cccccCCCeeeCHHHHHHHhhccC--CeEEEECCCCCCCCCcCCH
Confidence 9999999999999999999999999999999988 764 3446789999999998 44 5999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc---cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+++++|+++|+++|+++|+||+| +.+.+.... .. ..++++++.|+||.+|++|+|+||+++++ +++.+.+
T Consensus 214 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~--~~l~~~~ 291 (421)
T 3l8a_A 214 DDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN--ESLRRKF 291 (421)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC--HHHHHHH
Confidence 99999999999999999999999 666553221 11 13677999999999999999999999886 6788877
Q ss_pred HHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHH
Q 015890 256 LKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV 334 (398)
Q Consensus 256 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (398)
...... ..++.+++++.++.++++...+++++..+.++++++++.+.|++++.+.+..+.++++.|++++....+..++
T Consensus 292 ~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l 371 (421)
T 3l8a_A 292 QYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQL 371 (421)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHH
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHH
Confidence 766532 3457889999999999986667888999999999999999998776668888888888889987533356788
Q ss_pred HHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 335 VRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
...|++++||.+.+|..|+. ++++||+++. +++++++++++|.++++
T Consensus 372 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 372 SEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 88887677999999988864 6899999995 89999999999998764
No 33
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-45 Score=349.81 Aligned_cols=371 Identities=24% Similarity=0.358 Sum_probs=301.2
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|......+.++++.+.. .+++++||+.|.++. .+++++.+++.+.+.... ...|++..+..++|+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~-~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~ 99 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKFA-ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE 99 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTTT-TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhhhhcCCCcHHHHHHHhc-cCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHH
Confidence 45666655555566554432 457899999987654 267899999988876421 3578777899999999999998
Q ss_pred hhcC---CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890 83 QENK---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159 (398)
Q Consensus 83 ~~~~---~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l 159 (398)
+++| +++++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++ +|++.|++.+
T Consensus 100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~~~l 176 (425)
T 1vp4_A 100 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL 176 (425)
T ss_dssp HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred hccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHH
Confidence 7767 667899999999999999999999999999999999999999999999999988 776553 7999999998
Q ss_pred cc------CCCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc---ccCCcEEEEc
Q 015890 160 ET------KPTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC---VEGDHVVNLF 226 (398)
Q Consensus 160 ~~------~~~~~~v-~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~---~~~~~~i~~~ 226 (398)
++ ...+++| ++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... .. ...+++++++
T Consensus 177 ~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~ 256 (425)
T 1vp4_A 177 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN 256 (425)
T ss_dssp HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred HhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEe
Confidence 75 1125887 46799999999999999999999999999999999999 66654321 11 1236789999
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhc
Q 015890 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS 304 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~ 304 (398)
|+||.++ +|+|+||++++ +++++.+.......+++.+.+.+.++..+|+.. .+++++..+.++++++.+.+.|+
T Consensus 257 s~sK~~~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 332 (425)
T 1vp4_A 257 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE 332 (425)
T ss_dssp ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cccceEEEeeC---HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999999 788888877665556677999999999999864 35677888888899999998887
Q ss_pred cC-C---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHH
Q 015890 305 PL-G---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADR 376 (398)
Q Consensus 305 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~ 376 (398)
+. + ++.+..+.+++|+|+.++... +..++++.|+ ++||.+.||..|. .++++||+++..+++++++++++
T Consensus 333 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~-~~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~ 410 (425)
T 1vp4_A 333 EYFSDIPGVKWVKSEGGLFIWLTLPEGF-DTWEMFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR 410 (425)
T ss_dssp HHSTTSTTCEECCCSBSSEEEEECCTTC-CTTTTHHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred HhCCCCCceEEecCCccEEEEEEcCCCC-CHHHHHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 63 3 356666777899999997532 4567888886 5699999998874 35799999997678999999999
Q ss_pred HHHHHHHHhcc
Q 015890 377 LRRGLEELVKD 387 (398)
Q Consensus 377 l~~~~~~~~~~ 387 (398)
|.++++++.++
T Consensus 411 l~~~l~~~~~~ 421 (425)
T 1vp4_A 411 LREVVLEYGKE 421 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999887654
No 34
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-45 Score=349.79 Aligned_cols=347 Identities=17% Similarity=0.173 Sum_probs=295.2
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~ 104 (398)
.+|+++++|+.|.+++++++.+.+++.+.+.+.....|++..+..++|+.+++++.+.++ +++++|++|+|++++++.
T Consensus 41 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~ 120 (437)
T 3g0t_A 41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV 120 (437)
T ss_dssp HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred hcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHH
Confidence 357899999999999999999999999988754337788888889999999999988776 457899999999999999
Q ss_pred HHHHhc--cCCC--EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCcc
Q 015890 105 IVLTLC--DAGD--SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 105 ~~~~l~--~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~ 179 (398)
++.+++ ++|| +|+++.|+|+++...++..|.+++.+ +.+++++.+|++.|++.+ +++ +++|++++|+||||.
T Consensus 121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~--~~~v~l~~p~nptG~ 197 (437)
T 3g0t_A 121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESF-DLFEYRGEKLREKLESYLQTGQ--FCSIIYSNPNNPTWQ 197 (437)
T ss_dssp HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEE-EGGGGCTTHHHHHHHHHHTTTC--CCEEEEESSCTTTCC
T ss_pred HHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEE-eecCCCCccCHHHHHHHHhcCC--ceEEEEeCCCCCCCC
Confidence 999998 9999 99999999999999999999999999 877677788999999999 444 599999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-c--------ccc-cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-H--------CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~--------~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
+++.+++++|+++|+++|+++|+||+| +.+.+.. . ... ..+++++++|+||.+|++|+|+||++++
T Consensus 198 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-- 275 (437)
T 3g0t_A 198 CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS-- 275 (437)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC--
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC--
Confidence 999999999999999999999999999 5554321 1 111 2678899999999999999999999999
Q ss_pred cHHHHH-H-----------------HHHhhccCCCCcchHHHHHHHHHhcCCchH---HHHHHHHHHHHHHHHHHHhccC
Q 015890 248 VEGFAT-Q-----------------LLKVQDNIPICASIISQHLALYSLQTGPEW---VTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 248 ~~~~~~-~-----------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+++++ . +.......+++.+.+.+.++..+++....+ +++..+++.++++.+.+.|+++
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 276 -GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp -HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 78887 6 665555556788999999999999863233 7888899999999999999988
Q ss_pred CCCccc------cC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCC--CeEEEEecCCCHHHHHHHHHHH
Q 015890 307 GEGAVK------GG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 307 ~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~iRi~~~~~~~~~~~~~~~~l 377 (398)
+. .+. .+ .+++++|+.++ ..+..++.+.|. ++||.+.++..|+.. +++||+++..+++++++++++|
T Consensus 355 g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l 430 (437)
T 3g0t_A 355 GF-NIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRL 430 (437)
T ss_dssp TE-EESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHH
T ss_pred CC-EEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence 54 555 24 67899999987 246788888886 679999999887643 7899999977899999999999
Q ss_pred HHHHHH
Q 015890 378 RRGLEE 383 (398)
Q Consensus 378 ~~~~~~ 383 (398)
.+++++
T Consensus 431 ~~~~~~ 436 (437)
T 3g0t_A 431 QMLNAE 436 (437)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 987753
No 35
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=8.9e-45 Score=344.59 Aligned_cols=364 Identities=21% Similarity=0.268 Sum_probs=292.8
Q ss_pred HhHHhhccCchHHHHHHHHHHcC-CCeEEcCCccCCCCCcHH--H-------------HHHHHHhhcCCCCCCCCCCCCc
Q 015890 7 LAKRALETEMPIMVQIQELVRGA-KNAVSLAQGVVYWQPPKM--A-------------MEKVKELVWDPSISKYGADEGL 70 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~g~~~~~~~~~--v-------------~~a~~~~~~~~~~~~y~~~~~~ 70 (398)
+++|+.....+.++++.+...+. ++.++|+.|.|+...+|. . .++..+ ...|++..|.
T Consensus 7 ~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~ 80 (425)
T 2r2n_A 7 ITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR------ALQYSPSAGI 80 (425)
T ss_dssp SCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH------HTSCCCTTCC
T ss_pred HHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh------hcCCCCCCCC
Confidence 68888877767777776666553 689999999987643331 0 111111 2468888999
Q ss_pred HHHHHHHHHHHhhhcCCCC---------CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEec
Q 015890 71 PELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~~---------~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 141 (398)
.++|+++++++.+.++.+. ++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v- 159 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV- 159 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE-
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-
Confidence 9999999999988887653 589999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHhhccC----------CCCeEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ec
Q 015890 142 PCSSKTLHPDADWLEKTLETK----------PTPKLVSV-VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~----------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~ 208 (398)
+.++++ +|++.|++.++.. ..+++|++ .+|+||||.+++.+++++|+++|++||+++|+||+| +.
T Consensus 160 ~~~~~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 160 ASDESG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp CEETTE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred CcCCCC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 776553 6999999998721 23588876 589999999999999999999999999999999999 66
Q ss_pred cCCCcc---cc-ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---
Q 015890 209 YDGRKH---CC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--- 281 (398)
Q Consensus 209 ~~~~~~---~~-~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--- 281 (398)
+++... .. ...+++++++|+||.++ +|+|+||++++ +++++.+........++.+.+.|.++..+|+..
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 313 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP---KPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEE 313 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE---HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccc
Confidence 655321 11 12467899999999998 99999999999 789998888776667889999999999998751
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhcc-CCCC-ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---
Q 015890 282 --PEWVTERVKDLVRNREIIREALSP-LGEG-AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--- 354 (398)
Q Consensus 282 --~~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--- 354 (398)
.+++++.++.++++++.+.+.|++ .++. .+..+.+++|+|++++... +..+++.+.+.++||.+.||..|+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~l~~~gv~v~pg~~f~~~~~ 392 (425)
T 2r2n_A 314 GFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-DVKELIEEKAVKMGVLMLPGNAFYVDSS 392 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-CCHHHHHTHHHHTTEECEEGGGGSSSTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-CHHHHHHHHHHHCCcEEechhhhcCCCC
Confidence 255677788888899999999887 4443 4556778999999997643 4455433344689999999998853
Q ss_pred --CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 355 --RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 355 --~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++||+++..+++++++++++|.+++++.
T Consensus 393 ~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 393 APSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp SCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 479999998558999999999999998764
No 36
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.7e-44 Score=339.79 Aligned_cols=364 Identities=23% Similarity=0.360 Sum_probs=297.7
Q ss_pred HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCC--CCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN 82 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~--~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~ 82 (398)
+++|......+.++++.+.. .++++++|+.|.+.. .+++.+.+++.+.+.+. ....|++..+..++++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~- 87 (397)
T 2zyj_A 10 FGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI- 87 (397)
T ss_dssp SCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-
T ss_pred hhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-
Confidence 66776666656667666654 357899999887543 26788999988877542 1357877778999999999998
Q ss_pred hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
|+++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++ +|+++|++.+++.
T Consensus 88 ---g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~--~d~~~l~~~l~~~ 161 (397)
T 2zyj_A 88 ---GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PDLDALEEVLKRE 161 (397)
T ss_dssp ---TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHHC
T ss_pred ---CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEec-CcCCCC--CCHHHHHHHHhhc
Confidence 5677899999999999999999999999999999999999999999999999988 766543 7999999999862
Q ss_pred CCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc---cC---CcEEEEccccccc
Q 015890 163 PTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV---EG---DHVVNLFSFSKAY 232 (398)
Q Consensus 163 ~~~~~v-~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~---~~---~~~i~~~s~sK~~ 232 (398)
. +++| ++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... ... .. +++++++|+||.+
T Consensus 162 ~-~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 240 (397)
T 2zyj_A 162 R-PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL 240 (397)
T ss_dssp C-CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTT
T ss_pred C-CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccc
Confidence 2 4887 46799999999999999999999999999999999999 66544321 111 12 6789999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhcc-CC-CC
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSP-LG-EG 309 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~-~~ 309 (398)
+ +|+|+||++++ +++++.+........++.+.+.+.++..+|+... +++++..+.++++++.+.+.|++ .+ ++
T Consensus 241 ~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~ 316 (397)
T 2zyj_A 241 S-PGLRVAFAVAH---PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV 316 (397)
T ss_dssp C-GGGCCEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred c-ccceeEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 9 99999999999 7888888776655556778999999999998643 56778888888999999999876 44 35
Q ss_pred ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+..+.+++++|++++.. .+..++.++|+ ++||.+.+|..|+ .++++||+++..+++++++++++|.++++++.
T Consensus 317 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 317 RYTRPKGGMFVWMELPKG-LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp EECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 666677789999999753 35778888886 6699999998874 46799999997678999999999999998765
No 37
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=4.6e-44 Score=338.94 Aligned_cols=352 Identities=21% Similarity=0.293 Sum_probs=288.4
Q ss_pred CCCeEEcCCccC----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh------cC--CCCCcEEEec
Q 015890 29 AKNAVSLAQGVV----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE------NK--LYKSSVMVTA 96 (398)
Q Consensus 29 g~~~~~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~------~~--~~~~~v~~~~ 96 (398)
.+++++|+.|.+ .+++++.+.+++.+.+.......|++..+..++|+++++++.+. .+ +++++|++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~ 111 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS 111 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence 357999999986 56789999999999887654567877788999999999999731 23 5678999999
Q ss_pred ChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|++.+++++ +++++++|+|
T Consensus 112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~n 188 (416)
T 1bw0_A 112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKDDKT--KLLIVTNPSN 188 (416)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTE--EEEEEESSCT
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEe-ecCcccCCCCCHHHHHHHhccCC--eEEEEeCCCC
Confidence 99999999999999999999999999999999999999999988 66543 56789999999998654 8999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC----ccccc----cCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR----KHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~----~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
|||.+++.+++++|+++|+++|+++|+||+| +.+++. ..... ..+++++++|+||.++++|+|+||++++
T Consensus 189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~ 268 (416)
T 1bw0_A 189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV 268 (416)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEee
Confidence 9999999999999999999999999999999 655553 22111 1345788999999998899999999987
Q ss_pred CC---cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEE
Q 015890 246 SE---VEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 321 (398)
Q Consensus 246 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 321 (398)
+. ...+...+.... ..+++.+.+.++++..+|+. ...++++..++++++++.+.+.|++++++.+..+.+++|+|
T Consensus 269 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 347 (416)
T 1bw0_A 269 DPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM 347 (416)
T ss_dssp CTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred CchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence 41 112333333221 12567889999999999985 34678888899999999999999988655666677789999
Q ss_pred eeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 322 ARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 322 ~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+.++.. ..+..+++.+|++++||.+.+|..|+.++++||+++. +++++++++++|.+++++..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 887631 1356778888877899999999988878899999984 88999999999999988754
No 38
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=5.3e-44 Score=331.25 Aligned_cols=332 Identities=20% Similarity=0.250 Sum_probs=281.3
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
.+++++++|+.|.+++++||++++++.+.+.+ ...| +..+..++++.+++++ ++++++|++++|+++++..++
T Consensus 13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 13 PSTDNPIRINFNENPLGMSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHH----QVEAPSILLTAGSSEGIRAAI 85 (354)
T ss_dssp CCSSSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHT----TSCGGGEEEESHHHHHHHHHH
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHh----CCChHHEEEeCChHHHHHHHH
Confidence 46789999999999999999999999998875 5667 5556778888888876 677889999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ +.+|++.|++.++..+++++|++++|+||||.+++.+++
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 163 (354)
T 3ly1_A 86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV-KMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI 163 (354)
T ss_dssp HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence 9999999999999999999999999999999999 77643 678999999999832225999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCcccc----ccC-CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
.+|+++| ++|+++|+||+| +.+.+..... ... +++++++|+||.+|++|+|+||++++ +++++.+....
T Consensus 164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~ 239 (354)
T 3ly1_A 164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH---PTVIALMGRYV 239 (354)
T ss_dssp HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC---HHHHHHHGGGT
T ss_pred HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC---HHHHHHHHHhc
Confidence 9999988 799999999999 5554432221 123 78899999999999999999999998 88998887776
Q ss_pred ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890 260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 339 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 339 (398)
. .++.+.+.+.++.++++. .+++++..++++++++++.+.|++++. .+..+. ++|+|+.++. +..++...|.
T Consensus 240 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~l~ 311 (354)
T 3ly1_A 240 A--GEKINFSGVDAALASMND-SAFITYSKKSNDVSRQILLKALEDLKL-PYLPSE-GNFVFHQLVV---PLKDYQTHMA 311 (354)
T ss_dssp T--CSCCCHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCC-SSEEEEECSS---CHHHHHHHHH
T ss_pred C--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCC---CHHHHHHHHH
Confidence 5 478899999999999986 477888899999999999999988754 555444 7789999874 5778888775
Q ss_pred HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 340 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
++||.+. |..++.++++||+++ +++++++++++|++++++
T Consensus 312 -~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 312 -DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred -HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 7899999 776777899999988 588999999999888753
No 39
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-43 Score=330.23 Aligned_cols=327 Identities=19% Similarity=0.263 Sum_probs=278.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+++++++|+.|.+++++||++.+++.+.+.. ...| +..+..++++.+++++ ++++++|++++|++++++.++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 30 GLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY----QLEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp TCSCCEECSSCSCTTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh----CCChhhEEEeCCHHHHHHHHHH
Confidence 4578999999999999999999999987754 4566 5678899999999998 5778899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++++++.++++ +++|++++|+||||.++|.+++.
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~--~~~v~~~~p~nptG~~~~~~~l~ 178 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREI-PLLQ-DGEHDLEGMLNAIDEK--TTIVWICNPNNPTGNYIELADIQ 178 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEE-ECCT-TSCCCHHHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCC-CCCcCHHHHHHhcccC--CCEEEEeCCCCCcCCCcCHHHHH
Confidence 999999999999999999999999999999999 7765 4678999999999865 49999999999999999988888
Q ss_pred HHHHHHHHcCCEEEEeece--eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
++++.|++ |+++|+||+| +.+ +... .....++++++.|+||.+|++|+|+||++++ +++++.+.....
T Consensus 179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~- 252 (363)
T 3ffh_A 179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD---KEIIRQLNIVRP- 252 (363)
T ss_dssp HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC---HHHHHHHHHTCC-
T ss_pred HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC---HHHHHHHHHhCC-
Confidence 88887777 9999999999 444 3211 1223678899999999999999999999998 899998887765
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+++.+.+.++++..+++. .+++++..++++++++++.+.|+++.++.+.++. ++|+|+.++. +..++.+.|. +
T Consensus 253 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~l~-~ 325 (363)
T 3ffh_A 253 -PFNTTSIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI---EAGTIFSYLE-K 325 (363)
T ss_dssp -SCCCBHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS---CHHHHHHHHH-H
T ss_pred -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC---CHHHHHHHHH-H
Confidence 678899999999999985 5778888999999999999999885455666555 7888999874 5778888776 7
Q ss_pred cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+||.+.+|..|+.++++||+++ +++++++++++|+++
T Consensus 326 ~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 326 NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence 8999999999888899999998 689999999998875
No 40
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.6e-43 Score=329.51 Aligned_cols=328 Identities=19% Similarity=0.258 Sum_probs=280.5
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+.+++++|+.|.+++++||.+++++.+.+.. ...|+...+ .++|+.+++++ ++++++|++++|++++++.++.
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 28 GVKEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY----KVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp TCSCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 4478999999999999999999999998874 567865555 89999999987 6778899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+++++||+|+++.|+|+++...++..|.+++.+ +.+.+++ +|++++++.++++ +++|++++|+||||.+++.+++.
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~d~~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~ 176 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKT-QSITHNL-DEFKKLYETHKDE--IKLIFLCLPNNPLGECLDASEAT 176 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEEC-SSSSCCH-HHHHHHHHHTTTT--EEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecCCCCC-CCHHHHHHHhCCC--CCEEEEcCCCCCCCCCcCHHHHH
Confidence 999999999999999999999999999999999 7644556 8999999999865 49999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeece--ecc--CCC-cccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890 188 RISDLCKAAGSWLVVDNTY--FMY--DGR-KHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~--~~~--~~~-~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
+|+++| ++|+++|+||+| +.+ .+. .... ...+++++++|+||.+|++|+|+||++++ +++++.+...
T Consensus 177 ~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~ 252 (365)
T 3get_A 177 EFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN---ANIISAFYKL 252 (365)
T ss_dssp HHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC---HHHHHHHHHH
T ss_pred HHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC---HHHHHHHHHh
Confidence 998888 579999999999 553 221 1111 13578899999999999999999999997 8899988876
Q ss_pred hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890 259 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338 (398)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (398)
.. .++.+.+.+.++..+++. .+++++..+++.++++++.+.|++++. .+..+. ++|+|+.++.. +..++.+.|
T Consensus 253 ~~--~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~-~~~~~~~~~~~--~~~~~~~~l 325 (365)
T 3get_A 253 RA--PFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHNI-KIIDSY-TNFITYFFDEK--NSTDLSEKL 325 (365)
T ss_dssp SC--TTCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-EECCCS-SSEEEEECSSS--CHHHHHHHH
T ss_pred cC--CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-EECCCC-CeEEEEECCCC--CHHHHHHHH
Confidence 65 467899999999999985 577888999999999999999988854 666555 67789999754 677888877
Q ss_pred HHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 339 AHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 339 l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
. ++||.+.+|..|+ ++++|++++ +++++++++++|++++
T Consensus 326 ~-~~gi~v~~g~~~~-~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 326 L-KKGIIIRNLKSYG-LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp H-TTTEECEECGGGT-CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred H-HCCEEEEECccCC-CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 5 7899999999888 899999998 5889999999998765
No 41
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-44 Score=342.63 Aligned_cols=344 Identities=17% Similarity=0.243 Sum_probs=285.9
Q ss_pred CCCeEEcCCccC-CCCCcHHH--HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCc---EEEecChHHH
Q 015890 29 AKNAVSLAQGVV-YWQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSS---VMVTAGANQA 101 (398)
Q Consensus 29 g~~~~~l~~g~~-~~~~~~~v--~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~---v~~~~g~t~a 101 (398)
.+++++|+.|.+ +++.+|.+ .+++.+.+.......|++..|..++++++++++.+.+ ++++++ |++|+|++++
T Consensus 46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~a 125 (430)
T 2x5f_A 46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHG 125 (430)
T ss_dssp TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHH
T ss_pred CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHH
Confidence 467999999999 88877877 7777666543235678777889999999999997765 456788 9999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCcc
Q 015890 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~ 179 (398)
++.++.+++++||+|+++.|+|+++...++. .|.+++.+ +.++.++.+|++.|++.++.. ..++++++++|+||||.
T Consensus 126 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~ 204 (430)
T 2x5f_A 126 LSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTY-PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGY 204 (430)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEE-CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCC
T ss_pred HHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEE-eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Confidence 9999999999999999999999999999999 99999999 776533678999999999751 12589999999999999
Q ss_pred CCCHHHHHHHHHHHHH-----cCCEEEEeece--eccCCCcc-c---cc-c-CCc---EEEEcccccccCCCcceeEEEE
Q 015890 180 YIPERLLKRISDLCKA-----AGSWLVVDNTY--FMYDGRKH-C---CV-E-GDH---VVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~-----~~~~livDe~~--~~~~~~~~-~---~~-~-~~~---~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
+++.+++++|+++|++ +|+++|+||+| +.+++... . .. . .++ +++++|+||.+|++|+|+||++
T Consensus 205 ~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~ 284 (430)
T 2x5f_A 205 TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMT 284 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEE
T ss_pred cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEE
Confidence 9999999999999999 99999999999 66655321 1 11 2 567 8999999999999999999999
Q ss_pred c---cCCcHHHHHHHHHhhcc----CCCCcchHHHHHHHHHhc-CCchHHHH---HHHHHHHHHHHHHHHhc----cCCC
Q 015890 244 Y---PSEVEGFATQLLKVQDN----IPICASIISQHLALYSLQ-TGPEWVTE---RVKDLVRNREIIREALS----PLGE 308 (398)
Q Consensus 244 ~---~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~-~~~~~~~~---~~~~~~~~~~~l~~~l~----~~~~ 308 (398)
+ + +++++.+...... .+++.+.+.+.++.++|+ .. .+.++ ..+.++++++.+.+.|+ +.+
T Consensus 285 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g- 359 (430)
T 2x5f_A 285 FGTSD---QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHSH- 359 (430)
T ss_dssp EBCCC---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-
T ss_pred EecCC---HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 9 7 7888888766544 567889999999999998 63 34444 78888899999999998 454
Q ss_pred CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.+..+.+++|+|+.++ . .+..+++.+|++++||.+.|| .++++||+++..+++++++++++|.++++++
T Consensus 360 ~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 360 WQAYDFNSGYFMAIKVH-D-VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp EEECCCCBSSEEEEEES-S-SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred ceeeCCCceEEEEeCCC-C-CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 46667777889999987 3 367788888875499999997 4679999999558899999999999998764
No 42
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-43 Score=329.09 Aligned_cols=329 Identities=20% Similarity=0.308 Sum_probs=281.7
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+++++|+.|.+++++||++.+++.+.+.+.....|+. .+..++++.+++++ ++ ++++|++++|++++++.++.
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 29 SHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM----QVPAGMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp CTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH----TCCTTCEEEEEEHHHHHHHHHHH
T ss_pred CCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh----CCCCcceEEEcCCHHHHHHHHHH
Confidence 36799999999999999999999999886433567744 57889999999987 56 67899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
+++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++.|++.+++ ++ ++|++++|+||||.+++.+++
T Consensus 104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~~~~l 179 (367)
T 3euc_A 104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGV-PLRA-DFTLDRGAMLAAMAEHQP--AIVYLAYPNNPTGNLFDAADM 179 (367)
T ss_dssp HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCHHHH
T ss_pred HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHHHhhccCC--CEEEEcCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999 8775 457899999999986 54 999999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 187 KRISDLCKAA--GSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 187 ~~i~~l~~~~--~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
++|+++|++| |+++|+||+| +...+........++++++.|+||. +++|+|+||++++ +++++.+.....
T Consensus 180 ~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~-- 253 (367)
T 3euc_A 180 EAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD---PQWLEQLDKVRP-- 253 (367)
T ss_dssp HHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC---HHHHHHHGGGCC--
T ss_pred HHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeC---HHHHHHHHHhCC--
Confidence 9999999999 9999999999 4433332233345788999999999 8899999999998 888888876654
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+++.+.+.+.++..+++. .+++++..+++.++++++.+.|++++++.+.+ .+++|+|+.++ +..++...| .++
T Consensus 254 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~----~~~~l~~~l-~~~ 326 (367)
T 3euc_A 254 PYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP-SAANFLLARVP----DAAQTFDRL-LAR 326 (367)
T ss_dssp SSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC-CSSSEEEEECS----CHHHHHHHH-HTT
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC----CHHHHHHHH-HHC
Confidence 567899999999999987 67788999999999999999999886656554 44888899887 467788776 589
Q ss_pred CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
||.++++..|+ .++++|++++ +++++++++++|++++
T Consensus 327 gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 327 KVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASL 365 (367)
T ss_dssp TEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred CeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHh
Confidence 99999998764 4689999988 6899999999998765
No 43
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=6.2e-44 Score=334.41 Aligned_cols=356 Identities=15% Similarity=0.173 Sum_probs=278.3
Q ss_pred hHHhhccCchHHHHHHHHHHc--CCCeEEcCCccC-----CCCCcHHHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHHH
Q 015890 8 AKRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-----YWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALVK 79 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--g~~~~~l~~g~~-----~~~~~~~v~~a~~~~~-~~~~~~~y~~~~~~~~~~~~l~~ 79 (398)
..++.....+.+..+....+. ..+.|+|+.|.+ +..+++.+.+++. .+ .....++|++..|.+++|+++++
T Consensus 5 ~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~ 83 (405)
T 3k7y_A 5 LSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQN 83 (405)
T ss_dssp GGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHH
Confidence 346666666666666655543 367999999972 2345788888866 43 33346789999999999999999
Q ss_pred HHhhhcCC--CCCc--EEEecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCCh
Q 015890 80 KLNQENKL--YKSS--VMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA 152 (398)
Q Consensus 80 ~l~~~~~~--~~~~--v~~~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~ 152 (398)
++.+.++. ++++ +++|+|+++|+..++..+.. + |+|++++|+|+++...++..|++++.+ +. +++++.+|+
T Consensus 84 ~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~ 161 (405)
T 3k7y_A 84 LIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYI-NFFDYNLIDINY 161 (405)
T ss_dssp HHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEE-CCEETTTTEECH
T ss_pred HHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEE-eccccccCCcCH
Confidence 99766543 3454 69999999999999999987 8 999999999999999999999999999 77 455678999
Q ss_pred HHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-----cc--cccCCcE
Q 015890 153 DWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-----HC--CVEGDHV 222 (398)
Q Consensus 153 e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-----~~--~~~~~~~ 222 (398)
+.+++.++..+..+++++++| |||||.+++.+++++|+++|+++|+++|+||+| +.+++.. .. ....+++
T Consensus 162 ~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T 3k7y_A 162 DLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAF 241 (405)
T ss_dssp HHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCE
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcE
Confidence 999999975333478888755 899999999999999999999999999999999 6654311 11 1224689
Q ss_pred EEEcccccccCCCcceeEEEEc--cCCcHHHHHHHH----HhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVK 290 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~ 290 (398)
++++|+||.|+++|+|+||+++ ++ +++++.+. ........+.+...|.++..+++.. .++++++++
T Consensus 242 i~~~S~SK~~~l~GlRiG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~ 319 (405)
T 3k7y_A 242 SVCQSFSKNMSLYGERAGALHIVCKN--QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQ 319 (405)
T ss_dssp EEEEECTTTSCCTTTTEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864 33 66655543 2222334456788888888888752 123456677
Q ss_pred HHHHHHHHHHHHhc----cCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890 291 DLVRNREIIREALS----PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363 (398)
Q Consensus 291 ~~~~~~~~l~~~l~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~ 363 (398)
.++++++.+.+.|+ +++. +.+..+++++|+|+.++. +++.+| +++||.+.|+. |||++
T Consensus 320 ~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------~~~~~L-~~~gV~v~p~~--------Ris~a 384 (405)
T 3k7y_A 320 RITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------KIAEHL-KTHHIYIINNG--------RINVS 384 (405)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG------GGTTTT-TTTTEECCTTS--------EEEGG
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH------HHHHHH-HHCCEeecCCC--------eEEEe
Confidence 78999999999998 7653 477788999999988753 445667 79999999963 99998
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 015890 364 GLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 364 ~~~~~~~~~~~~~l~~~~~~ 383 (398)
..+++++++++++|.+++++
T Consensus 385 ~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 385 GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp GCCTTHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHhh
Confidence 87889999999999998864
No 44
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=7.2e-44 Score=340.90 Aligned_cols=340 Identities=22% Similarity=0.348 Sum_probs=279.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
+|+++++|+.|.++++.+|.+.+++.+.+.+ .....|++..+..++++++++++....++++++|++++|+++++.
T Consensus 67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~ 146 (449)
T 3qgu_A 67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA 146 (449)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence 4788999999999999999999999988863 335678888899999999999987111456789999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE----------EEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT----------HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
.+ ..++++||+|+++.|+|+++...++..|.+ ++.+ +.+++ ++.+|++.+ + .+++|++++
T Consensus 147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~--~~~~v~l~~ 217 (449)
T 3qgu_A 147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYM-VCNPDNHFFPDLSKA-----K--RTDIIFFCS 217 (449)
T ss_dssp HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEE-ECCGGGTTCCCGGGC-----C--CCSEEEEES
T ss_pred HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEE-ecccccCCcCChhHc-----C--CCCEEEEeC
Confidence 98 888899999999999999999999999988 8888 76644 555555432 2 359999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc----cCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
|+||||.+++.+++++|+++|+++|+++|+||+| +.+++... ... ..++++++.|+||.+|++|+|+||++++
T Consensus 218 p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 297 (449)
T 3qgu_A 218 PNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVP 297 (449)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecC
Confidence 9999999999999999999999999999999999 55554221 111 1356899999999999999999999998
Q ss_pred CCcHHHHH--------HHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 246 SEVEGFAT--------QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 246 ~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
+ ++++ .+.........+.+.+.+.++.++++. ..+++++..+.+.++++.+.+.|++.+. .+..+.+
T Consensus 298 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~ 373 (449)
T 3qgu_A 298 K---ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDD 373 (449)
T ss_dssp T---TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEESSS
T ss_pred H---HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCC
Confidence 4 4332 344444444567899999999999875 3366788889999999999999998864 7777777
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
++|+|+.++ ..+..+++.+|++++||.+.||..|+. +++|||++.. +++++++++++|.+++++
T Consensus 374 ~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 374 APYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYGK 439 (449)
T ss_dssp SSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC-
T ss_pred eeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 999999998 346788998898777999999998863 6899999876 899999999999987754
No 45
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=8e-43 Score=336.96 Aligned_cols=338 Identities=23% Similarity=0.326 Sum_probs=276.1
Q ss_pred CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEE
Q 015890 44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVV 117 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl 117 (398)
.|+.+++++.+.+... ....|++..|..++|+.+++++.+.+| +++++|++|+|+++++..++.+++ ++||.|+
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 186 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGIL 186 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence 4556777777777652 467899999999999999999987766 568899999999999999999998 8999999
Q ss_pred EeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|++.+++. ..+++|++++|+||||.+++.+++++|+++
T Consensus 187 v~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l 265 (500)
T 3tcm_A 187 VPIPQYPLYSASIALHGGALVPY-YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF 265 (500)
T ss_dssp EEESCCTHHHHHHHHTTCEEEEE-ECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EeCCCcHhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence 99999999999999999999999 77654 5789999999999851 125899999999999999999999999999
Q ss_pred HHHcCCEEEEeece--eccCCC-cccc-----------ccCCcEEEEccccccc-CCCcceeEEEEc---cCCcHHHHHH
Q 015890 193 CKAAGSWLVVDNTY--FMYDGR-KHCC-----------VEGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQ 254 (398)
Q Consensus 193 ~~~~~~~livDe~~--~~~~~~-~~~~-----------~~~~~~i~~~s~sK~~-~~~G~r~G~i~~---~~~~~~~~~~ 254 (398)
|+++|+++|+||+| +.+++. .... ....++++++|+||.| |++|+|+||+++ + +++++.
T Consensus 266 a~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~---~~~~~~ 342 (500)
T 3tcm_A 266 CKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS---APVREQ 342 (500)
T ss_dssp HHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC---TTHHHH
T ss_pred HHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC---HHHHHH
Confidence 99999999999999 556432 2111 1123578899999999 899999999987 5 678888
Q ss_pred HHHhhccCCCCcchHHHHHHHHHhcCC----------chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890 255 LLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324 (398)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (398)
+..... ..++++.+.|.++..+++.. ..+..+.++.++++++.+.+.|++++++.+..+++++|+|+++
T Consensus 343 l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~ 421 (500)
T 3tcm_A 343 IYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQI 421 (500)
T ss_dssp HHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEE
T ss_pred HHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeee
Confidence 776653 46778899999999988731 1345666778888899999999988666888889899999655
Q ss_pred CCC-----------CCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 325 PEK-----------HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 325 ~~~-----------~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
... ..+...++.++++++||++.||+.|+. .++||++++ ++++++++++++|.++++++.++
T Consensus 422 ~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 422 CLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp CCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 311 011233456778889999999999863 458999999 68999999999999999988764
No 46
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=2.2e-43 Score=335.93 Aligned_cols=338 Identities=24% Similarity=0.361 Sum_probs=275.6
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
+++++++|+.|+++++.||.+++++.+.+.. ...+.|++..+..++++++++++.+..++++++|++++|+++++.
T Consensus 54 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~ 133 (432)
T 3ei9_A 54 PDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDIS 133 (432)
T ss_dssp TTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHH
Confidence 4578999999999999999999999988763 234578778899999999999998766778899999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcChhhHHHhcCc------------EEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEE
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i 170 (398)
.+ ..++++||+|+++.|+|+++...++..|. +++.+ +.+.. ++..|++. .+ .+++|++
T Consensus 134 ~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~-----~~--~~~~v~l 204 (432)
T 3ei9_A 134 RL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM-RCTPENGFFPDLST-----VG--RTDIIFF 204 (432)
T ss_dssp HH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE-ECCGGGTTSCCGGG-----CC--CCSEEEE
T ss_pred HH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe-ccCcccCCcCChhh-----CC--CCCEEEE
Confidence 74 77789999999999999999988887773 56666 65533 34455433 12 3599999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcceeEEEEc
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAY 244 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~ 244 (398)
++|+||||.+++.+++++|+++|++||+++|+||+| +.+++...... ..+++++++|+||.||++|+|+||+++
T Consensus 205 ~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~ 284 (432)
T 3ei9_A 205 CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI 284 (432)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEEC
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEE
Confidence 999999999999999999999999999999999999 54543322221 135689999999999999999999999
Q ss_pred cCCcHHH--------HHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890 245 PSEVEGF--------ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315 (398)
Q Consensus 245 ~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 315 (398)
++ ++ ++.+.........+.+.+++.++.+++.. ..+++++..+.+.++++.+.+.|++++. .+..+.
T Consensus 285 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~ 360 (432)
T 3ei9_A 285 PK---KLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGY-DVYGGK 360 (432)
T ss_dssp CT---TCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEECS
T ss_pred Ch---HHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCc-eecCCC
Confidence 84 44 56666555545667889999998888863 3366788889999999999999988854 677666
Q ss_pred ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
+++|+|+.++. .+..+++.++++++||.+.||..|+. ++++||++.. +++++++++++|++--
T Consensus 361 ~~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 361 NAPYVWVHFPN--QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQLY 425 (432)
T ss_dssp SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCC--CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 78999999983 36778888888778999999998863 6899999975 8999999999998654
No 47
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6.8e-44 Score=338.23 Aligned_cols=363 Identities=16% Similarity=0.134 Sum_probs=284.4
Q ss_pred hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCC---CCCcHHHHHHHHHhhc--CC-CCCCCCCCCCcHHHHHHHHHHH
Q 015890 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVKELVW--DP-SISKYGADEGLPELRDALVKKL 81 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~---~~~~~~v~~a~~~~~~--~~-~~~~y~~~~~~~~~~~~l~~~l 81 (398)
++++.......+.+..++...| ..++|+.|.|+ +++++.+.+++.+.+. .. ....|++..|..++|+++++++
T Consensus 11 ~~~l~~~~~~~~~~~~~l~~~~-~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 89 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELKAKN-LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL 89 (422)
T ss_dssp -------CHHHHHHHHHHHHTT-CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHhccC-CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh
Confidence 4455544556666666666654 48999999998 7778888888776531 21 2568988889999999999998
Q ss_pred hhhcCCCCCcEEEecChHHHH--HHHHHHhccC------------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCC
Q 015890 82 NQENKLYKSSVMVTAGANQAF--VNIVLTLCDA------------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT 147 (398)
Q Consensus 82 ~~~~~~~~~~v~~~~g~t~a~--~~~~~~l~~~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 147 (398)
++++++|++|+|+++++ ..++.++..+ +|+|+++.|+|+++...++..|.+++.+ +.++++
T Consensus 90 ----~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~g 164 (422)
T 3d6k_A 90 ----GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDEG 164 (422)
T ss_dssp ----TCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE
T ss_pred ----CCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec-CCCCCC
Confidence 67889999999999997 6777777765 3479999999999999999999999999 776654
Q ss_pred CCCChHHHHHhhccCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEeece--eccC--CCcc-cc----
Q 015890 148 LHPDADWLEKTLETKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTY--FMYD--GRKH-CC---- 216 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~-~~~~~livDe~~--~~~~--~~~~-~~---- 216 (398)
+|++.+++.+++.. +++|+ +++|+||||.+++.+++++|+++|+ ++|+++|+||+| +.+. +... ..
T Consensus 165 --~d~~~l~~~l~~~~-~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 241 (422)
T 3d6k_A 165 --PDMGVVRELVKDPQ-VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFA 241 (422)
T ss_dssp --ECHHHHHHHHTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHH
T ss_pred --CCHHHHHHHHhcCC-CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHh
Confidence 79999999997533 58888 6799999999999999999999999 999999999999 2342 2111 11
Q ss_pred ---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C--chHHHHHHH
Q 015890 217 ---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVK 290 (398)
Q Consensus 217 ---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~ 290 (398)
...+++++++|+||. +++|+|+||++++ +++++.+........++.+.+.|.++..+|+. + .+++++.++
T Consensus 242 ~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 317 (422)
T 3d6k_A 242 QAAGNPNRFWFMSSTSKI-THAGSGVSFFASS---KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAA 317 (422)
T ss_dssp HHTTCTTCEEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred hccCCCCcEEEEcChhhh-cCcccceEEEEeC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 135789999999999 5799999999999 88999888877666778899999999999986 2 256677777
Q ss_pred HHHHHHHHHHHHhcc----CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC-CCCC-----CCCeEEE
Q 015890 291 DLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-GACG-----CRGHLRI 360 (398)
Q Consensus 291 ~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g-~~~~-----~~~~iRi 360 (398)
.++++++.+.+.|.+ .+.+.+..+.+++|+|++++.. +..++.. ++.++||.++|+ ..|. .++++||
T Consensus 318 ~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~-~l~~~gV~v~~~g~~f~~~~~~~~~~iRi 394 (422)
T 3d6k_A 318 SLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVE-LAKEAGIALTGAGSSFPLHNDPNNENIRL 394 (422)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHH-HHHHCCeEEEcCccccCCCCCCCCCeEEE
Confidence 777778777766653 4444556677799999999753 4555555 556899999994 4453 3589999
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 361 SFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 361 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++..+++++++++++|.++++++..
T Consensus 395 s~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 395 APSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99965899999999999999987653
No 48
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=8.5e-43 Score=323.25 Aligned_cols=317 Identities=22% Similarity=0.301 Sum_probs=264.5
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
+++++|+.|.+++++||.+ .+. ....|++. +..++|+++++++ ++++++|++++|++++++.++.++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v------a~~--~~~~Y~~~-~~~~lr~~la~~~----~~~~~~v~~~~G~~~ai~~~~~~~ 95 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL------TQQ--TLNRYPEC-QPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIRAF 95 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC------CCC--CTTSCCCS-SCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CceEEeeCCCCCCCCCHhH------hhh--hhccCCCc-cHHHHHHHHHHHh----CCChHHEEEcCCHHHHHHHHHHHH
Confidence 4689999999999888877 222 25678554 5899999999998 677889999999999999999999
Q ss_pred ccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 ~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+++| |+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++++++.++ + +++|++++|+||||.+++.+++++
T Consensus 96 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~-~--~~~v~l~~p~nptG~~~~~~~l~~ 170 (356)
T 1fg7_A 96 CEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTLD-NWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDFRT 170 (356)
T ss_dssp CCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCCT-TSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred hCCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-eCCC-CCCCCHHHHHHHhc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999 999999999999999999999999998 7763 46789999999987 4 599999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeece--eccCCCcc-c-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 189 ISDLCKAAGSWLVVDNTY--FMYDGRKH-C-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~--~~~~~~~~-~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
|+++|+ +|+++|+||+| +.. +... . ....+++++++|+||.+|++|+|+||++++ +++++.+..... ++
T Consensus 171 l~~~~~-~~~~li~De~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~ 243 (356)
T 1fg7_A 171 LLELTR-GKAIVVADEAYIEFCP-QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--PY 243 (356)
T ss_dssp HHHHHT-TTCEEEEECTTGGGSG-GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--SS
T ss_pred HHHhCC-CCCEEEEEccchhhcC-CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC---HHHHHHHHHhcC--CC
Confidence 999999 99999999999 331 1111 1 123467899999999999999999999998 888888877654 45
Q ss_pred CcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 265 CASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+.+.+.+.++.++++. ..+ +++..+.++++++++.+.|++++.+....+.+++|+|++++ +..++.++| .++
T Consensus 244 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~~~ 317 (356)
T 1fg7_A 244 PLSTPVADIAAQALSP-QGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSL-WDQ 317 (356)
T ss_dssp CSCHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHH-HHT
T ss_pred CCCHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC----CHHHHHHHH-HHC
Confidence 7889999999999975 333 78888889999999999998877422333455889999986 467788877 589
Q ss_pred CeEEec-CCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890 343 GVVVIP-GGACGCRGHLRISFGGLVEDDCKAAADRLRR 379 (398)
Q Consensus 343 gi~v~~-g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 379 (398)
||.+++ |..|+.++++||+++. ++++++++++|++
T Consensus 318 gI~v~~~g~~~~~~~~iRis~~~--~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 318 GIILRDQNKQPSLSGCLRITVGT--REESQRVIDALRA 353 (356)
T ss_dssp TEECEECTTSTTCTTEEEEECCC--HHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCCCCeEEEEeCC--HHHHHHHHHHHHh
Confidence 999999 8878777899999984 7888888888764
No 49
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.9e-43 Score=336.06 Aligned_cols=366 Identities=17% Similarity=0.320 Sum_probs=281.1
Q ss_pred chHHHHHHHHHHc---CC-----CeEEcCCccCCC---CC----------------------cHHHHHHHHHhhcCC---
Q 015890 16 MPIMVQIQELVRG---AK-----NAVSLAQGVVYW---QP----------------------PKMAMEKVKELVWDP--- 59 (398)
Q Consensus 16 ~~~~~~~~~~~~~---g~-----~~~~l~~g~~~~---~~----------------------~~~v~~a~~~~~~~~--- 59 (398)
.+...+..++.++ |. +++.++.|.+.. .+ |..+++++.+.+...
T Consensus 41 g~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~ 120 (498)
T 3ihj_A 41 GPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGN 120 (498)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCC
Confidence 3444554444443 44 899999987622 22 555666666666531
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCCcEEEecChHHHHHHHHHHhccCCC----EEEEeCCCCcChhhHHHh
Q 015890 60 SISKYGADEGLPELRDALVKKLNQENK---LYKSSVMVTAGANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQM 132 (398)
Q Consensus 60 ~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~g~t~a~~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~ 132 (398)
....|++..|..++|+++++++.+.++ +++++|++|+|+++++..++.+++++|| .|+++.|+|+.+...++.
T Consensus 121 ~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 121 SLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp -------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 356799999999999999999988874 4688999999999999999999998875 999999999999999999
Q ss_pred cCcEEEEeccCCCC-CCCCChHHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890 133 TGVTHILVGPCSSK-TLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206 (398)
Q Consensus 133 ~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-- 206 (398)
.|.+++.+ +.+++ +|.+|+++|++.+++.. .+++|++++|+||||.+++.+++++|+++|+++|+++|+||+|
T Consensus 201 ~g~~~v~~-~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~ 279 (498)
T 3ihj_A 201 LDAIQVNY-YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD 279 (498)
T ss_dssp TTCEEEEE-ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cCCEEEEe-eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccc
Confidence 99999999 77654 57899999999998521 2599999999999999999999999999999999999999999
Q ss_pred eccCCC-ccccc------------cCCcEEEEccccccc-CCCcceeEEEE---ccCCcHHHHHHHHHhhccCCCCcchH
Q 015890 207 FMYDGR-KHCCV------------EGDHVVNLFSFSKAY-GMMGWRVGYIA---YPSEVEGFATQLLKVQDNIPICASII 269 (398)
Q Consensus 207 ~~~~~~-~~~~~------------~~~~~i~~~s~sK~~-~~~G~r~G~i~---~~~~~~~~~~~l~~~~~~~~~~~~~~ 269 (398)
+.+++. ..... ...++++++|+||.+ |++|+|+||++ .+ +++++.+..... ...+.+.+
T Consensus 280 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~---~~l~~~l~~~~~-~~~~~~~~ 355 (498)
T 3ihj_A 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH---PEIKGQLVKLLS-VRLCPPVS 355 (498)
T ss_dssp CBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC---HHHHHHHHHHHH-HSCCCCHH
T ss_pred cccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC---HHHHHHHHHHHh-ccCCCCHH
Confidence 666532 11111 112478899999999 78999999998 45 788888877654 45677899
Q ss_pred HHHHHHHHhcC---Cc----hH---HHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC----------CC
Q 015890 270 SQHLALYSLQT---GP----EW---VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK----------HL 329 (398)
Q Consensus 270 ~~~~~~~~l~~---~~----~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 329 (398)
.|.++..+++. ++ .+ ..+..+.+.++++.+.+.|++++++.+..+++++|+|+++... ..
T Consensus 356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~ 435 (498)
T 3ihj_A 356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQM 435 (498)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCC
Confidence 99998888863 11 22 3456678888999999999988667888889899999776421 12
Q ss_pred ChHHH-HHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 330 DDFEV-VRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 330 ~~~~~-~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+..++ +.++++++||.+.||+.|+. ++++|++++ ++++++++++++|.++++++.++
T Consensus 436 ~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 436 APDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp CHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 34444 67788889999999999863 459999997 58999999999999999988754
No 50
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=7.2e-43 Score=331.04 Aligned_cols=360 Identities=18% Similarity=0.156 Sum_probs=286.9
Q ss_pred hhHhHHhhccCchHHHHHHHHHHc--CCCeEEcCCc---cCCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015890 5 AKLAKRALETEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77 (398)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~l~~g---~~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l 77 (398)
|++++|+...+.+.++.+.+...+ ++++++|+.| ++... +++.+.+++.+.+.+.....|++..|..++|+++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 101 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASV 101 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHH
Confidence 568888888887877777766643 4689999999 45544 4489999999988775567898889999999999
Q ss_pred HHHHhhhcCC--CCC--cEEEecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCC
Q 015890 78 VKKLNQENKL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP 150 (398)
Q Consensus 78 ~~~l~~~~~~--~~~--~v~~~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 150 (398)
++++....+. +++ +|++|+|++++++.++ .+++++||+|+++.|+|.++...++..|.+++.+ +. +++++.+
T Consensus 102 a~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~ 180 (420)
T 4f4e_A 102 QKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAY-PYYDAKTNGV 180 (420)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEE-ECEETTTTEE
T ss_pred HHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEe-eeeccccCcc
Confidence 9999765442 567 8999999999999994 4667999999999999999999999999999999 76 4456788
Q ss_pred ChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cc----cccCCc
Q 015890 151 DADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HC----CVEGDH 221 (398)
Q Consensus 151 d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~----~~~~~~ 221 (398)
|++.+++.++.. +..+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.. .. ....++
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN 260 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence 999999999832 22488899999999999999999999999999999999999999 6665311 11 113578
Q ss_pred EEEEcccccccCCCcceeEEEEc--cCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERV 289 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~ 289 (398)
++++.|+||.+|++|+|+||++. ++ +++++. +.........+++...+.++..++... .+++++.+
T Consensus 261 ~i~~~S~SK~~~~~G~RiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 338 (420)
T 4f4e_A 261 VFVSSSFSKSFSLYGERVGALSIITDS--KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR 338 (420)
T ss_dssp EEEEEECTTTTTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCccCcCcCCCcEEEEEEcCC--HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 89999999999999999999864 32 555544 333323345567888888888888752 34577888
Q ss_pred HHHHHHHHHHHHHhccC---CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCC
Q 015890 290 KDLVRNREIIREALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLV 366 (398)
Q Consensus 290 ~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~ 366 (398)
+.++++++.+.+.|+++ +++.+..+.+++|+|+.++ . +.+.++++++||.+.|+. |++++..+
T Consensus 339 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~-~~~~~~l~~~gI~v~~~~--------Ris~~~~~ 404 (420)
T 4f4e_A 339 DRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----S-AQVDRLREEFGIYAVSTG--------RICVAALN 404 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----H-HHHHHHHHHHCEECCTTS--------EEEGGGCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----H-HHHHHHHHhCCEEecCCC--------eEEEecCC
Confidence 89999999999999886 3457777888999998774 2 445556678999999852 99998767
Q ss_pred HHHHHHHHHHHHHHH
Q 015890 367 EDDCKAAADRLRRGL 381 (398)
Q Consensus 367 ~~~~~~~~~~l~~~~ 381 (398)
++++++++++|.+++
T Consensus 405 ~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 405 TRNLDVVANAIAAVL 419 (420)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 788999999998875
No 51
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=2.9e-43 Score=328.85 Aligned_cols=323 Identities=19% Similarity=0.287 Sum_probs=275.1
Q ss_pred HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH
Q 015890 51 KVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130 (398)
Q Consensus 51 a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~ 130 (398)
++.+.+... ...|++..+..++++.+++++. +++++++++++|+++|+..++.+++++||+|+++.|+|+++...+
T Consensus 47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~ 122 (375)
T 3op7_A 47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT---GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP 122 (375)
T ss_dssp HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS---SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH
T ss_pred HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc---cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH
Confidence 444444443 4678888999999999999873 467889999999999999999999999999999999999999999
Q ss_pred HhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--e
Q 015890 131 QMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F 207 (398)
Q Consensus 131 ~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~ 207 (398)
+..|.+++.+ +.+ ++++.+|++.|++++++++ ++|++++|+||||.++|.+++++|+++|++||+++|+||+| +
T Consensus 123 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 123 KSLGAEVDLW-QIEEENGWLPDLEKLRQLIRPTT--KMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp HHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred HHcCCEEEEE-eccccCCCCCCHHHHHHhhccCC--eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 9999999988 765 4467789999999998654 99999999999999999999999999999999999999999 5
Q ss_pred ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHH
Q 015890 208 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 287 (398)
Q Consensus 208 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 287 (398)
.+.+........+++++++|+||.+|++|+|+||++++ +++++.+........++.+.+.+.++..+++..+.++++
T Consensus 200 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 276 (375)
T 3op7_A 200 SELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAAN---HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILER 276 (375)
T ss_dssp SSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECC---HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred cccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeC---HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHH
Confidence 54432222233577899999999999999999999997 899999988877777888899999998888864466778
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCH
Q 015890 288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 367 (398)
Q Consensus 288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~ 367 (398)
..+.++++++.+.+.|++.+.+.+..+.++++.|+.++.. .+..+++.++++++||.+.||..|+.++++|++++. +.
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~ 354 (375)
T 3op7_A 277 NRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC-EQ 354 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS-CH
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC-CH
Confidence 8888899999999999887766777777777888887653 367888888877899999999988888999999997 56
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 015890 368 DDCKAAADRLRRGLEELV 385 (398)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~ 385 (398)
+++++++++|.++++++.
T Consensus 355 ~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 355 ETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp HHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999987654
No 52
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=9.2e-43 Score=330.23 Aligned_cols=340 Identities=16% Similarity=0.172 Sum_probs=274.8
Q ss_pred CCCeEEcCCccC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
|.++++|+.|.+ ++++++.+.+++.+.... ....|++..|..++++++++++.+.++.+ +++|++|+|+++++
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al 115 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGI 115 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHH
Confidence 678999999975 778899999988764432 24578888899999999999997765422 22899999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCC-CCCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNP-GNPS 177 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p-~npt 177 (398)
..++.+++++||+|+++.|+|.++...++..|.+++.+ +.+++++.+|++.+++.+++ ++ .+++++++| +|||
T Consensus 116 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~vi~~~p~~NPt 193 (418)
T 3rq1_A 116 HHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTY-SLFDEHNNFNHEAFQNRVNELAAKQT-NVVVIFNTPGNNPT 193 (418)
T ss_dssp HHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CSBCTTSSBCHHHHHHHHHHHHHHCS-EEEEEEECSSCTTT
T ss_pred HHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEE-eeeCCCCCcCHHHHHHHHHHhhccCC-CEEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999 87544467899999999975 44 247888899 9999
Q ss_pred ccCCCHHHHHHHHHHHH------HcCCEEEEeece--eccCCCcc---ccc---cCCc--EEEEcccccccCCCcceeEE
Q 015890 178 GTYIPERLLKRISDLCK------AAGSWLVVDNTY--FMYDGRKH---CCV---EGDH--VVNLFSFSKAYGMMGWRVGY 241 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~------~~~~~livDe~~--~~~~~~~~---~~~---~~~~--~i~~~s~sK~~~~~G~r~G~ 241 (398)
|.+++.+++++|+++|+ ++|+++|+||+| +.+.+... ... ..++ +++++|+||.+|++|+|+||
T Consensus 194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 273 (418)
T 3rq1_A 194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGA 273 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEE
T ss_pred CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceE
Confidence 99999999999999999 899999999999 55543211 111 1233 58899999999999999999
Q ss_pred EEc---cCCcHHHHHHHHHhhccC----CCCcchHHHHHHHHHhcCCc---hH---HHHHHHHHHHHHHHHHHHhccCCC
Q 015890 242 IAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 242 i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+++ + +++++.+....... ..+.+.+++.++..+++... .+ .++.++.++++++.+.+.|++++.
T Consensus 274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 350 (418)
T 3rq1_A 274 MIGISDD---EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGL 350 (418)
T ss_dssp EEEEESS---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCC---HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 998 6 78888877654321 24578899999998887621 12 235567778888888888887754
Q ss_pred CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+..+.+++|+|++++ +..++++.| .++||.+.|| ++++||+++..+++++++++++|.++++++.
T Consensus 351 -~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 351 -PMLPYRGGFFITIPTD----SANAICEEL-KKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -CCCCCCSSSEEEEECT----THHHHHHHH-HHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred -CCCCCCceEEEEcCCC----CHHHHHHHH-HhCCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 7777888889998874 467777755 6899999997 4789999886689999999999999998764
No 53
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.3e-42 Score=330.11 Aligned_cols=347 Identities=22% Similarity=0.330 Sum_probs=279.6
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcC----------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEe
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD----------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVT 95 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~ 95 (398)
.++++|+.+.++++ ++.+.+++.+.... .....|++..|..++++++++++.+.++ +++++|+++
T Consensus 36 ~~~i~l~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~ 114 (428)
T 1iay_A 36 NGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA 114 (428)
T ss_dssp TSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred Cceeeeccccchhh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence 46899999888876 56888888754310 0135687777899999999999988776 568899999
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-HhcCcEEEEeccCCC-CCCCCChHHHHHhhcc----CCCCeEEE
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVS 169 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~----~~~~~~v~ 169 (398)
+|+++++..++.+++++||+|+++.|+|+++...+ +..|.+++.+ +.+. +++.+|++.+++.++. ...+++|+
T Consensus 115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 193 (428)
T 1iay_A 115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193 (428)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEe-ecCCccCCcCCHHHHHHHHHHHHhcCCceEEEE
Confidence 99999999999999999999999999999987744 4679999998 7754 4677899999999873 22368999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc--c-------CCcEEEEcccccccCCC
Q 015890 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV--E-------GDHVVNLFSFSKAYGMM 235 (398)
Q Consensus 170 i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~--~-------~~~~i~~~s~sK~~~~~ 235 (398)
+++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.+... . .. . .++++++.|+||.+|++
T Consensus 194 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~ 273 (428)
T 1iay_A 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP 273 (428)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG
T ss_pred EcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCC
Confidence 9999999999999999999999999999999999999 55554321 1 11 1 47889999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+|+||+++++ +++++.+..... .++.+.+++.++..+++... +++++..+.+.++++.+.+.|++++. .+.
T Consensus 274 Glr~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 348 (428)
T 1iay_A 274 GFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI-KCL 348 (428)
T ss_dssp GGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CBC
T ss_pred CceEEEEEeCC--HHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccc
Confidence 99999999853 678887776543 46788999999999998621 35677888888999999999988754 666
Q ss_pred cCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+.+++|+|++++... .+..++.++|++++||.+++|..|+. ++++||+++..+++++++++++|++++++
T Consensus 349 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 349 KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp CCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred CCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 6767899999986421 12446778777556999999987754 57999999966899999999999988754
No 54
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=3.7e-42 Score=319.70 Aligned_cols=328 Identities=16% Similarity=0.224 Sum_probs=273.2
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
.++++++||+.|.+++++||.+.+++.+.+.. ...| +..+..++++.+++++ ++++++|++|+|++++++.++
T Consensus 23 ~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 23 FKGRELLDYSSNINPLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL----KLKDIGIVLGNGASEIIELSI 95 (361)
T ss_dssp -----CEETTCCCCTTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH----TCCSCEEEEESSHHHHHHHHH
T ss_pred cCCCCEEEecCCCCCCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHH
Confidence 46789999999999999999999999998866 4567 5677899999999998 677899999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.++ |+|+++.|+|+++...++..|.+++.+ +.++++ .++++++++.+++ + ++|++++|+||||.+++.+++
T Consensus 96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~~~~l~~~l~~-~--~~v~i~~p~nptG~~~~~~~l 166 (361)
T 3ftb_A 96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFS-YLDENM-CIDYEDIISKIDD-V--DSVIIGNPNNPNGGLINKEKF 166 (361)
T ss_dssp TTC----SEEEEEESCCTHHHHHHHHTTCEEEEE-ECCTTS-CCCHHHHHHHTTT-C--SEEEEETTBTTTTBCCCHHHH
T ss_pred HHc----CcEEEecCChHHHHHHHHHcCCeEEEe-ecCccc-CCCHHHHHHhccC-C--CEEEEeCCCCCCCCCCCHHHH
Confidence 988 899999999999999999999999999 877553 4578999999987 4 999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCC-Cc--cccccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhc
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDG-RK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQD 260 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~-~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~l~~~~~ 260 (398)
++|+++|+++|+++|+||+| +.++. .. ......+++++++|+||.+|++|+|+||++ .+ +++++.+.....
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~---~~~~~~~~~~~~ 243 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN---KEIAAKIKAKQN 243 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC---HHHHHHHHTTSC
T ss_pred HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC---HHHHHHHHhhCC
Confidence 99999999999999999999 44431 11 111234678999999999999999999998 66 888888877655
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLA 339 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 339 (398)
+++.+.+.+.++.++++. .+++++..+++.++++++.+.|++++++. +..+. ++++++.++. .+..++.+.|.
T Consensus 244 --~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~ 317 (361)
T 3ftb_A 244 --PWNINCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPH-ANFVLCRLEN--ISGEKLYDSLL 317 (361)
T ss_dssp --TTCSCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCS-SSEEEEEESS--SCHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCC-CeEEEEEcCC--CCHHHHHHHHH
Confidence 568899999999999985 67788899999999999999999887766 66565 7778888875 36778888886
Q ss_pred HhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 340 HRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
++||.+++|..|+. ++++|++++ +.++++++++.|.+..+
T Consensus 318 -~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 318 -KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred -HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 67999999998853 689999998 46677777777766554
No 55
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3.6e-42 Score=320.14 Aligned_cols=331 Identities=18% Similarity=0.241 Sum_probs=271.5
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+|++++||+.|.+++++++.+.+++.+.+.. ...|+ ..+..++++.+++++ ++++++|++++|+++++..++.
T Consensus 22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~----~~~~~~v~~~~g~~~al~~~~~ 94 (364)
T 1lc5_A 22 SPDQLLDFSANINPLGMPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHH----QVPASWILAGNGETESIFTVAS 94 (364)
T ss_dssp CGGGSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHH
T ss_pred CccceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHH----CcCHHHEEECCCHHHHHHHHHH
Confidence 5678999999998888899999999998764 45674 457899999999998 6777899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
++ +||+|+++.|+|+++...++..|.+++.+ +.+. +++.+ ++.+.+.++++ +++|++++|+||||.++|.+++
T Consensus 95 ~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~-l~~~~~~~~~~--~~~v~i~~p~nptG~~~~~~~l 168 (364)
T 1lc5_A 95 GL--KPRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQL-TDAILEALTPD--LDCLFLCTPNNPTGLLPERPLL 168 (364)
T ss_dssp HH--CCSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCC-CTTHHHHCCTT--CCEEEEESSCTTTCCCCCHHHH
T ss_pred Hc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEE-eCCcccccch-hHHHHHhccCC--CCEEEEeCCCCCCCCCCCHHHH
Confidence 99 67999999999999999999999999998 7764 35544 56666666544 4899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhcc
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~l~~~~~~ 261 (398)
++|+++|+++|+++|+||+| +.+++..... ...+++++++|+||.+|++|+|+||++ .+ +++++.+.....
T Consensus 169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---~~~~~~l~~~~~- 244 (364)
T 1lc5_A 169 QAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQM- 244 (364)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC---HHHHHHHHHHSC-
T ss_pred HHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC---HHHHHHHHHhCC-
Confidence 99999999999999999999 5443322211 235678999999999999999999999 77 888888877654
Q ss_pred CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+++.+.+.+.++.++|+. .+++++..+.++++++++.+.|++++++.+.++. ++|+++.++. +..++...|. +
T Consensus 245 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~---~~~~l~~~l~-~ 317 (364)
T 1lc5_A 245 -PWSVNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQRRLL-T 317 (364)
T ss_dssp -TTCSCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC---TTCCHHHHHH-T
T ss_pred -CCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC---cHHHHHHHHH-H
Confidence 567899999999999986 5678888889999999999999887655666544 7788888864 2446777775 7
Q ss_pred cCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 342 HGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 342 ~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
+||.+.+|..|. .++++||+++. .+++++++++|+++++++
T Consensus 318 ~gi~v~~g~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 318 QRILIRSCANYPGLDSRYYRVAIRS--AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp TTEECEECTTSTTCCTTEEEEECCC--HHHHHHHHHHHHHHC---
T ss_pred CCcEEeeCcccCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhhcc
Confidence 899999998875 36799999884 778888888888776654
No 56
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=8.2e-43 Score=328.59 Aligned_cols=339 Identities=22% Similarity=0.324 Sum_probs=263.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~ 102 (398)
.++++++|+.|.++++++|.+.+++.+.+.. .....|++..+..++|+++++++. ++ +++++|++++|+++++
T Consensus 31 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~~~~~~v~~~~G~~~al 108 (400)
T 3asa_A 31 PQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGFVDAKEIFISDGAKVDL 108 (400)
T ss_dssp TTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTSSCGGGEEEESCHHHHH
T ss_pred CCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCCCCHHHEEEccChHHHH
Confidence 4678999999999888899999999887743 124568777889999999999964 35 6788999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
..++. ++++||+|+++.|+|+++...++..|.+ ++.+ +.+++ ++..|++. + + .+++|++++|+||||.+
T Consensus 109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~l~~----~-~--~~~~v~l~~p~nptG~~ 179 (400)
T 3asa_A 109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIAL-PCLQENAFFPEFPE----D-T--HIDILCLCSPNNPTGTV 179 (400)
T ss_dssp HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEE-ECCGGGTTCCCCCT----T-C--CCSEEEEESSCTTTCCC
T ss_pred HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEec-ccchhcCcccChhh----c-c--CccEEEEeCCCCCCCCc
Confidence 98764 4578999999999999999999999998 8888 76543 34444332 1 2 35999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-ccccc--c--CCcEEEEcccccccCCCcceeEEEEccCCcHHH--
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-- 251 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~--~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-- 251 (398)
++.+++++|+++|+++|+++|+||+| +.+.+. +.... . .+++++++|+||.+|++|+|+||+++++ ++
T Consensus 180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~---~~~~ 256 (400)
T 3asa_A 180 LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ---ELTY 256 (400)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT---TCBC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh---hhcc
Confidence 99999999999999999999999999 555442 11221 1 3468999999999999999999999984 44
Q ss_pred -----HHHHHHhhccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee-C
Q 015890 252 -----ATQLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR-L 324 (398)
Q Consensus 252 -----~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~ 324 (398)
++.+....... ..+.+.+.+.++.++|+.. ++++..+.++++++.+.+.|++.+. .+..+.+++|+|+. +
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~ 333 (400)
T 3asa_A 257 ADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLATGF-EVFGGEHAPYLWVKPT 333 (400)
T ss_dssp TTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHTTC-EEEECSSSSEEEEECC
T ss_pred chhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCCceEEEEecc
Confidence 44443222112 2367899999998888753 5667778888899999999988754 67766678999999 7
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+.. .+..+++.+|++++||.+.||..|+ .++++||++. .+++++++++++|.++++...
T Consensus 334 ~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 334 QAN-ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERLQMAPALQS 394 (400)
T ss_dssp CTT-CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHHHC------
T ss_pred CCC-CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHHHHHHHhhh
Confidence 643 2455788888767799999998875 3678999965 489999999999999887654
No 57
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=5.6e-42 Score=326.46 Aligned_cols=349 Identities=21% Similarity=0.322 Sum_probs=282.9
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-----------CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEE
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-----------ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV 94 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~ 94 (398)
..+++|+.+.+++. ++.+.+++.+...... ...|++..|..++++++++++.+..+ +++++|++
T Consensus 38 ~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~ 116 (435)
T 3piu_A 38 NGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVL 116 (435)
T ss_dssp TSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEE
T ss_pred CCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEE
Confidence 45888998877776 7788888877544211 14688888999999999999986544 56889999
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCCCC-CCCCChHHHHHhhcc----CCCCeEE
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSSK-TLHPDADWLEKTLET----KPTPKLV 168 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~----~~~~~~v 168 (398)
++|+++++..++.+++++||.|+++.|+|.++...++ ..|.+++.+ +.+.+ ++.+|++.|++.+++ ...+++|
T Consensus 117 ~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 195 (435)
T 3piu_A 117 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195 (435)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEe-eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence 9999999999999999999999999999999988777 789999998 77643 477899999999974 1236999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-----c---------CCcEEEEccccccc
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-----E---------GDHVVNLFSFSKAY 232 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-----~---------~~~~i~~~s~sK~~ 232 (398)
++++|+||||.+++.+++++|+++|++||+++|+||+| +.+.+...... . ++++++++|+||.+
T Consensus 196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~ 275 (435)
T 3piu_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence 99999999999999999999999999999999999999 55655332111 1 46789999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---chHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
|++|+|+||+++++ +.+.+.+..... .++.+.+.+.++..+++.. .+++++.++++.++++.+.+.|++.+.
T Consensus 276 g~~G~r~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~- 350 (435)
T 3piu_A 276 GLPGFRVGAIYSND--DMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGI- 350 (435)
T ss_dssp CCGGGCEEEEEESC--HHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred CCCceeEEEEEeCC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 99999999999964 667777765544 4566788888888888752 124567778888899999999988754
Q ss_pred ccccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.+..+.+++++|+.++.... +..+++.+|++++||.+.||..|+ .++++||+++..+++++++++++|.++++
T Consensus 351 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 351 SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVG 430 (435)
T ss_dssp EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 77777877999999975321 245778888766699999998875 46899999986689999999999999998
Q ss_pred HHh
Q 015890 383 ELV 385 (398)
Q Consensus 383 ~~~ 385 (398)
++.
T Consensus 431 ~~~ 433 (435)
T 3piu_A 431 EYY 433 (435)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 58
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=5.6e-42 Score=324.31 Aligned_cols=337 Identities=16% Similarity=0.194 Sum_probs=271.8
Q ss_pred CCCeEEcCCccC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~ 102 (398)
|+++++|+.|.+ ++++++.+.+++.+.... ....|++..|..++++++++++.+..+. ++++|++|+|+++++
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al 114 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAI 114 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHH
Confidence 678999999986 777899999988764322 2457888889999999999998766542 234899999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCe-EEEEeCC-CCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPK-LVSVVNP-GNP 176 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~-~v~i~~p-~np 176 (398)
..++.+++++||+|+++.|+|.++...++..|.+++.+ +.++.++.+|++.|++.+++ ++ + ++++++| +||
T Consensus 115 ~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~--~~~vi~~~p~~NP 191 (413)
T 3t18_A 115 RSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTF-EFFTDDFAFNIDVYKEAIDEGIRDSD--RIASLINSPGNNP 191 (413)
T ss_dssp HHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEE-CCBCTTSSBCHHHHHHHHHHHHHHCS--EEEEEEECSSCTT
T ss_pred HHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEe-eccCCCCCcCHHHHHHHHHHHhhcCC--CEEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999 77444467899999999975 44 6 7888899 999
Q ss_pred CccCCCHHHHHHHHHHHH------HcCCEEEEeece--eccCCCcccc--c----cCCc--EEEEcccccccCCCcceeE
Q 015890 177 SGTYIPERLLKRISDLCK------AAGSWLVVDNTY--FMYDGRKHCC--V----EGDH--VVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~------~~~~~livDe~~--~~~~~~~~~~--~----~~~~--~i~~~s~sK~~~~~G~r~G 240 (398)
||.+++.+++++|+++|+ ++|+++|+||+| +.+.+..... . ..++ +++++|+||.+|++|+|+|
T Consensus 192 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG 271 (413)
T 3t18_A 192 TGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSG 271 (413)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCE
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcE
Confidence 999999999999999999 899999999999 6665532111 1 1233 4888999999999999999
Q ss_pred EEEc---cCCcHHHHHHHHHhhccC----CCCcchHHHHHHHHHhcCCc-----hHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 241 YIAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP-----EWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 241 ~i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
|+++ + +++++.+....... ..+.+..++.++..+++... +..++..+.++++++.+.+.|++++.
T Consensus 272 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 348 (413)
T 3t18_A 272 AAVGISSS---KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKL 348 (413)
T ss_dssp EEEEEESC---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEecCC---HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998 6 78888877654321 24578888988888887521 23445677788888999999988854
Q ss_pred CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+..+++++|+|+++. +..++.+.| .++||.+.|| ++++||+++..+++++ +++|.++++++.+
T Consensus 349 -~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gv~v~~g-----~~~iRis~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 349 -TMIPYFGGFFTFIPTD----KAFDIVKDL-EKENIFTIPS-----AKGIRVAICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp -CCBCCCSSSCEEEECS----CHHHHHHHH-HHTTEECEEC-----SSEEEECTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred -CccCCCceEEEEeCCC----CHHHHHHHH-HhCCEEEecC-----CCceEEEEeeCCHHHH---HHHHHHHHHHHhc
Confidence 7777888888998773 567788766 6899999996 5789999997566666 8888888887653
No 59
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=5e-42 Score=324.56 Aligned_cols=359 Identities=18% Similarity=0.151 Sum_probs=281.4
Q ss_pred HhHHhhccCchHHHHHHHHHH--cCCCeEEcCCccC-CC----CCcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHH
Q 015890 7 LAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVV-YW----QPPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALV 78 (398)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~-~~----~~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~ 78 (398)
+.+|+.....+.++.+.+... .++++++|+.|.+ +. .+++.+.+++.+ .+.....+.|++..+..++|+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia 83 (412)
T 1yaa_A 4 LFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA 83 (412)
T ss_dssp TTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred hhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence 345555555555555555554 3678999999974 22 467999999999 876444567888889999999999
Q ss_pred HHHhhhcC--CCCCcEEE--ecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCC
Q 015890 79 KKLNQENK--LYKSSVMV--TAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPD 151 (398)
Q Consensus 79 ~~l~~~~~--~~~~~v~~--~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d 151 (398)
+++.+.++ +++++|++ |+|++++++.++ ..++.+||+|+++.|+|+++...++..|.+++.+ +. +++++.+|
T Consensus 84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d 162 (412)
T 1yaa_A 84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLD 162 (412)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEEC
T ss_pred HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEE-eeecCCCCccC
Confidence 99976555 35789999 999999999884 3445699999999999999999999999999998 76 44456789
Q ss_pred hHHHHHhhccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC---C--cccc--ccCC-
Q 015890 152 ADWLEKTLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG---R--KHCC--VEGD- 220 (398)
Q Consensus 152 ~e~l~~~l~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~---~--~~~~--~~~~- 220 (398)
++.+++.++..+. ..++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++ . +... ...+
T Consensus 163 ~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (412)
T 1yaa_A 163 LNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST 242 (412)
T ss_dssp HHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCC
Confidence 9999999975421 245555899999999999999999999999999999999999 55543 1 1111 1234
Q ss_pred --cEEEEcccccccCCCcceeEEEE--c-----cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------
Q 015890 221 --HVVNLFSFSKAYGMMGWRVGYIA--Y-----PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------ 281 (398)
Q Consensus 221 --~~i~~~s~sK~~~~~G~r~G~i~--~-----~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------ 281 (398)
++++++|+||.+|++|+|+||++ + + ++ +++.+.........+++.+.+.++..+|+..
T Consensus 243 ~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 319 (412)
T 1yaa_A 243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN---KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW 319 (412)
T ss_dssp TCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred CcceEEEeccCCCCCCcCCcceEEEEEecCCCCC---HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence 78999999999998899999998 7 4 55 7777766444444566889999999999863
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 015890 282 PEWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 358 (398)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~i 358 (398)
.+++++..+.++++++.+.+.|++++ .+.+..+.+++++|+.++ ...+ .++++++||.+.+ ++
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~--------~~ 385 (412)
T 1yaa_A 320 HKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT-----PQMV-KRLEETHAVYLVA--------SG 385 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCT--------TS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC-----HHHH-HHHHHhCCEEecc--------Cc
Confidence 24678888899999999999998876 357777777888887653 3344 6677789999986 57
Q ss_pred EEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 359 RISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 359 Ri~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
||+++..+++++++++++|+++++.
T Consensus 386 Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 386 RASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEEEccCCHhHHHHHHHHHHHHHHh
Confidence 9999866789999999999988764
No 60
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=4.7e-41 Score=312.16 Aligned_cols=326 Identities=18% Similarity=0.256 Sum_probs=267.8
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
+++++++|+.|.+++++||++.+++.+.+.+. ....| +..+..++++.+++++ ++++++|++++|++++++.+
T Consensus 24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~lr~~la~~~----g~~~~~i~~t~g~~~al~~~ 98 (360)
T 3hdo_A 24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIY-PSASSQKLREVAGELY----GFDPSWIIMANGSDEVLNNL 98 (360)
T ss_dssp CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSC-CCSSCHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHH
T ss_pred cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcC-CCCchHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence 56789999999999999999999999988763 14567 4456689999999998 57788999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
+.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ +.+ +++++.+ + ++++++++|+||||.+++
T Consensus 99 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~--~~l~~~~--~--~~~v~i~~p~nptG~~~~--- 167 (360)
T 3hdo_A 99 IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTF-GLTGD-FRI--AGFPERY--E--GKVFFLTTPNAPLGPSFP--- 167 (360)
T ss_dssp HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEE-CBCTT-SSB--TTCCSSB--C--SSEEEEESSCTTTCCCCC---
T ss_pred HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEe-eCCCC-CCH--HHHHhhc--C--CCEEEEeCCCCCCCCCcC---
Confidence 99999999999999999999999999999999999 77643 333 4443332 2 479999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890 186 LKRISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~ 263 (398)
++++.++|+++|+++|+||+|..+.+... .....+++++++|+||.+|++|+|+||++++ +++++.+..... .
T Consensus 168 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~ 242 (360)
T 3hdo_A 168 LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR---PEVIAALDKIRD--H 242 (360)
T ss_dssp HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC---HHHHHHHHHHSC--S
T ss_pred HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeC---HHHHHHHHHhCC--C
Confidence 66777788899999999999932333211 1223578899999999999999999999998 889998877664 5
Q ss_pred CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
++.+.+.++++.++|+. .+++++..+.++++++++.+.|++++. .+..+. ++|+|+.++. .+..++.+.|. ++|
T Consensus 243 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~--~~~~~l~~~l~-~~g 316 (360)
T 3hdo_A 243 YNLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIGY-DVIPSQ-GNYLFATPPD--RDGKRVYDGLY-ARK 316 (360)
T ss_dssp CCSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-EECCCS-SSEEEEECTT--CCHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEcCCC-ccEEEEECCC--CCHHHHHHHHH-HCC
Confidence 77899999999999986 677888999999999999999988843 665554 7788888763 35778888765 889
Q ss_pred eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
|.++++.....++++||+++ +.+++++++++|++..+
T Consensus 317 i~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 317 VLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGE 353 (360)
T ss_dssp EECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhc
Confidence 99999887666789999998 58888888888876653
No 61
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.9e-42 Score=326.04 Aligned_cols=353 Identities=16% Similarity=0.130 Sum_probs=281.4
Q ss_pred hHHHHHHHHHHcCCCeEEcCCccCCCCC---cHHHHHHH--HHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCC
Q 015890 17 PIMVQIQELVRGAKNAVSLAQGVVYWQP---PKMAMEKV--KELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYK 89 (398)
Q Consensus 17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~---~~~v~~a~--~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~ 89 (398)
+..++..+. ......++|+.|.++... ++.+.+++ .+.+.+. ....|++..|..++|+++++++ ++++
T Consensus 21 ~~~~~~~~~-~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~~~~ 95 (427)
T 3ppl_A 21 DIKRKFDEL-KSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----GVPV 95 (427)
T ss_dssp HHHHHHHHH-HHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----TSCG
T ss_pred HHHHHHHHh-hcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----CCCc
Confidence 334444433 344678999999876532 23566665 4544432 2578988889999999999998 6788
Q ss_pred CcEEEecChHHHH--HHHHHHhcc--C----------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890 90 SSVMVTAGANQAF--VNIVLTLCD--A----------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155 (398)
Q Consensus 90 ~~v~~~~g~t~a~--~~~~~~l~~--~----------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 155 (398)
++|++|+|+++++ +.++.++++ + ||+|+++.|+|.++...++..|.+++.+ +.++++ +|++.|
T Consensus 96 ~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l 172 (427)
T 3ppl_A 96 EQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDG--PDMDAV 172 (427)
T ss_dssp GGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEE-EEETTE--ECHHHH
T ss_pred ceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEe-CCCCCC--CCHHHH
Confidence 9999999999999 588888877 6 8999999999999999999999999999 887664 799999
Q ss_pred HHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEeece--eccCCCcc---cc-------ccCCc
Q 015890 156 EKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTY--FMYDGRKH---CC-------VEGDH 221 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~livDe~~--~~~~~~~~---~~-------~~~~~ 221 (398)
++.++... +++|++. +|+||||.+++.+++++|+++| +++|+++|+||+| +.+.+... .. ...++
T Consensus 173 ~~~l~~~~-~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
T 3ppl_A 173 EELVKNPQ-VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNR 251 (427)
T ss_dssp HHHTTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTS
T ss_pred HHHHhcCC-CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCc
Confidence 99995322 5888866 7899999999999999999999 9999999999999 55654321 11 13578
Q ss_pred EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C--chHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVKDLVRNREI 298 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~ 298 (398)
+++++|+||. +++|+|+||++++ +++++.+........++.+.+.|.++..+++. . ..++++..+.++++++.
T Consensus 252 ~i~~~S~SK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 3ppl_A 252 FWAFTSTSKI-TLAGAGVSFFLTS---AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNK 327 (427)
T ss_dssp EEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEechhhc-cCcCccEEEEEcC---HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5699999999999 88999888877766788899999999999986 2 24566777777777777
Q ss_pred HHHHhcc----CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC-CCCC-----CCCeEEEEecCCCHH
Q 015890 299 IREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-GACG-----CRGHLRISFGGLVED 368 (398)
Q Consensus 299 l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g-~~~~-----~~~~iRi~~~~~~~~ 368 (398)
+.+.|.+ ++.+.+..+.+++|+|++++.. +..++...+ .++||.++|| ..|. .++++||+++..+++
T Consensus 328 l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~ 404 (427)
T 3ppl_A 328 VLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE 404 (427)
T ss_dssp HHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred HHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence 7666643 4455667788899999999864 466777655 5899999994 4443 368999999877889
Q ss_pred HHHHHHHHHHHHHHHHh
Q 015890 369 DCKAAADRLRRGLEELV 385 (398)
Q Consensus 369 ~~~~~~~~l~~~~~~~~ 385 (398)
++++++++|.++++++.
T Consensus 405 ~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 405 ELEVAMDGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 62
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=7.8e-42 Score=323.75 Aligned_cols=349 Identities=19% Similarity=0.258 Sum_probs=267.3
Q ss_pred cCCCeEEcCCccCCCCCc--HHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890 28 GAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~--~~v~~a~~~~~~~~~----~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t 99 (398)
.+.++++|+.|.+...++ +.+.+++.+.+.+.. ...|++..|..++|+++++++.+.++ +++++|++|+|++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t 108 (417)
T 3g7q_A 29 RTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQ 108 (417)
T ss_dssp ---CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHH
T ss_pred cCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcH
Confidence 347899999998876432 566666666654321 24798888999999999999987765 5688999999999
Q ss_pred HHHHHHHHHhccCCC-----EEEEe-CCCCcChhhHHHhc------CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE
Q 015890 100 QAFVNIVLTLCDAGD-----SVVMF-APYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~ 167 (398)
++++.++.+++++|| +|+++ .|+|+++...+... +..+..+ +.+..++.+|++.++ ++++ +++
T Consensus 109 ~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~~~~--~~~ 183 (417)
T 3g7q_A 109 SAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFEHLH--IGEE--TGM 183 (417)
T ss_dssp HHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEE-GGGEEEEECCGGGCC--CCTT--EEE
T ss_pred HHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCccccc-CCcccccccCHHHhc--cccC--ceE
Confidence 999999999999987 89997 99998887655322 3344444 433224567998888 5544 599
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 168 v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
|++++|+||||.+++.+++++|+++|++||+++|+||+| ..+.+.. ......++++++.|+|| ++++|+|+||++
T Consensus 184 v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~ 262 (417)
T 3g7q_A 184 ICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIII 262 (417)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEE
T ss_pred EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEE
Confidence 999999999999999999999999999999999999999 3222211 11223568899999999 578999999999
Q ss_pred ccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHHHHHHHHhcc-CCC--CccccCCcc
Q 015890 244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSP-LGE--GAVKGGEGA 317 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~~~~ 317 (398)
.+ +++++.+........++.+.+.+.++..+++... .+..+ ..+.++++++.+.+.|.+ ++. +.+..+.++
T Consensus 263 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 339 (417)
T 3g7q_A 263 AN---DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGA 339 (417)
T ss_dssp CC---HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBS
T ss_pred eC---HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcc
Confidence 98 8899998887777778889999999999998633 22233 455667777777777655 332 466677889
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+++|+.++....+..++...| .++||.+.||+.|.. ++++||+++. +++++++++++|.++++++.++
T Consensus 340 ~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 340 IFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp SEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHhc
Confidence 999999986334678888877 589999999998753 4689999997 9999999999999999887643
No 63
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=5.3e-42 Score=325.50 Aligned_cols=356 Identities=18% Similarity=0.208 Sum_probs=282.8
Q ss_pred chHHHHHHHHHHcCCCeEEcCCccCC---CCCcHHHHHHHH--HhhcCC-CCCCC-CCCCCcHHHHHHHHHHHhhhcCCC
Q 015890 16 MPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVK--ELVWDP-SISKY-GADEGLPELRDALVKKLNQENKLY 88 (398)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~l~~g~~~---~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~~~~~~~~~l~~~l~~~~~~~ 88 (398)
.+.++++.+.. ...+.+||+.|.++ ++.|+.+.+++. +.+... ....| ++..|..++|+.+++++ +++
T Consensus 12 ~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~----~~~ 86 (423)
T 3ez1_A 12 DLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL----DVK 86 (423)
T ss_dssp HHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT----TSC
T ss_pred HHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh----CCC
Confidence 34455554444 34678999999998 677888999885 544422 24679 78889999999999998 678
Q ss_pred CCcEEEecChHHHHH--HHHHHhcc--C---------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890 89 KSSVMVTAGANQAFV--NIVLTLCD--A---------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~--~~~~~l~~--~---------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 155 (398)
+++|++|+|+++++. .++.++++ + ||+|+++.|+|+++...++..|.+++.+ +.++++ +|++.|
T Consensus 87 ~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l 163 (423)
T 3ez1_A 87 AENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAV 163 (423)
T ss_dssp GGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE--ECHHHH
T ss_pred hhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cCCCCC--CCHHHH
Confidence 889999999999998 88888887 7 5999999999999999999999999998 776654 799999
Q ss_pred HHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEeece--eccCC-C--cc-cc-------ccCC
Q 015890 156 EKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTY--FMYDG-R--KH-CC-------VEGD 220 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~livDe~~--~~~~~-~--~~-~~-------~~~~ 220 (398)
++.++..+.+++|++. +|+||||.+++.+++++|+++| +++|+++|+||+| +.+.+ . .. .. ...+
T Consensus 164 ~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (423)
T 3ez1_A 164 ERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPD 243 (423)
T ss_dssp HHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTT
T ss_pred HHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCC
Confidence 9999522235888765 8999999999999999999999 9999999999999 34433 1 11 11 1457
Q ss_pred cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC--C--chHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--G--PEWVTERVKDLVRNR 296 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~~ 296 (398)
++++++|+||. +++|+|+||++.+ +++++.+........++.+.+.+.++..+++. . ..++++..+.+.+++
T Consensus 244 ~~i~~~S~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 319 (423)
T 3ez1_A 244 RAFVFASTSKI-TFAGAGLGFVASS---EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKF 319 (423)
T ss_dssp SEEEEEESTTT-SCSSSSCEEEEEC---HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCchhh-ccCCcceEEEEeC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 89999999998 4699999999999 88999988887777888999999999998875 2 245566666666666
Q ss_pred HHHHHHh----ccCC-CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec-CCCCC-----CCCeEEEEecCC
Q 015890 297 EIIREAL----SPLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGL 365 (398)
Q Consensus 297 ~~l~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~~~ 365 (398)
+.+.+.| ..++ .+.+..+.+++|+|+.++.. +..++... +.++||.++| |..|. .++++||+++..
T Consensus 320 ~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~ 396 (423)
T 3ez1_A 320 RAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKL-AEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP 396 (423)
T ss_dssp HHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHH-HHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred HHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHH-HHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence 6655554 4455 34666778899999999753 45556654 4689999999 65564 358999999866
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++++++++|.++++++..
T Consensus 397 ~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 397 PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999988654
No 64
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=9.9e-41 Score=307.12 Aligned_cols=320 Identities=22% Similarity=0.300 Sum_probs=261.5
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~ 106 (398)
...+++++|+.+.++++++|.+.+++.+.... ...| +..+..++|+.+++++ ++++++|++++|+++++..++
T Consensus 13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~i~~t~G~~~~l~~~~ 85 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHF----SCPEDNLMLVRGIDECFDRIS 85 (337)
T ss_dssp -CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHH
T ss_pred cCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHH
Confidence 45678999999999999999999999998765 5667 5678899999999987 677889999999999999999
Q ss_pred HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.++ +||+|+++.|+|+++...++..|++++.+ +.++ ++.+|++.+++.. + ++++++++|+||||.++| +
T Consensus 86 ~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~--~--~~~v~i~~p~nptG~~~~---~ 154 (337)
T 3p1t_A 86 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEI-GLTD-DLLLDPNDLAQVS--R--DDCVVLANPSNPTGQALS---A 154 (337)
T ss_dssp HHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEE-CBCT-TSSBCHHHHTTCC--T--TEEEEEESSCTTTCCCCC---H
T ss_pred Hhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEe-cCCC-CCCCCHHHHHhhc--C--CCEEEEeCCCCCCCCCCC---H
Confidence 998 89999999999999999999999999999 7764 4578999998862 3 499999999999999999 5
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~ 264 (398)
+++.++|++++. +|+||+| +...+.. .....+++++++|+||.+|++|+|+||++++ +++++.+..... .+
T Consensus 155 ~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~ 227 (337)
T 3p1t_A 155 GELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAGLRLGALFGP---SELIAAMKRKQW--FC 227 (337)
T ss_dssp HHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTTTCCEEEECC---HHHHHHHHTTSC--TT
T ss_pred HHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcchheEEEEeC---HHHHHHHHhhcC--CC
Confidence 566667778886 6669999 4433321 2223467899999999999999999999999 788888876543 56
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 344 (398)
+.+.+.+.++..+++. .+++.+..+++.++++++.+.|++++. .+..+. +.|+++..+. ..++...| .++||
T Consensus 228 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~----~~~~~~~l-~~~gi 299 (337)
T 3p1t_A 228 NVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGY-RVASSE-ANFVLVENAA----GERTLRFL-RERGI 299 (337)
T ss_dssp CSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBCCCS-SSEEEEECTT----THHHHHHH-HHTTE
T ss_pred CCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-EECCCC-CeEEEEEcCC----HHHHHHHH-HHCCe
Confidence 7888999999999985 445667777788888999999988854 666666 6677777653 34555544 68999
Q ss_pred EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
.+++|..|+.++++||+++ +++++++++++|++++
T Consensus 300 ~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 300 QVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS 334 (337)
T ss_dssp ECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred EEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHh
Confidence 9999999988899999998 4788888888887654
No 65
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=6.6e-46 Score=348.80 Aligned_cols=351 Identities=17% Similarity=0.210 Sum_probs=287.7
Q ss_pred HHHHcCC--CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890 24 ELVRGAK--NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99 (398)
Q Consensus 24 ~~~~~g~--~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t 99 (398)
.|..+|+ ++++|+.|.+++++||.+.+++.+.+.+. ...|++. ..++++.+++++.+.++ +++++|++++|++
T Consensus 23 ~~d~~g~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~ 99 (392)
T 3b1d_A 23 KWKETETDPQLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVV 99 (392)
Confidence 4444556 89999999999999999999999988653 4567544 78899999999988777 5688999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
+++..++.++.++||+|+++.|+|+++...++..|.+++.+ +.+ ++ ++.+|++.+++.++... +++|++++|+|||
T Consensus 100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~-~~~v~~~~~~npt 177 (392)
T 3b1d_A 100 PAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENGLFQIDFEQLENDIVEND-VKLYLLCNPHNPG 177 (392)
Confidence 99999999999999999999999999999999999998888 664 33 36689999999997322 5889999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-c--CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
|.+++.+++++|+++|+++|+++|+||+| +.+++.... .. . .++++++.|+||.+|++|+|+||+++++ +
T Consensus 178 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~ 255 (392)
T 3b1d_A 178 GRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN--P 255 (392)
Confidence 99999999999999999999999999999 665542211 11 1 4678999999999999999999999874 4
Q ss_pred HHHHHHHHhhccCC-CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCC
Q 015890 250 GFATQLLKVQDNIP-ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 250 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
++++.+......+. .+.+.+.+.++.++|+...+++++.++.+.++++.+.+.|++ ++++.+..+.+++++|++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~ 335 (392)
T 3b1d_A 256 TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY 335 (392)
Confidence 57787776655443 356888888888888764567788888899999999999987 6666777788778888888753
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
..+..++...|++++||.+.||..|+ .++++||+++. +++++++++++|.++++
T Consensus 336 ~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 336 GLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 22456778877667899999998886 45789999997 67899999999988764
No 66
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=3e-41 Score=319.20 Aligned_cols=358 Identities=16% Similarity=0.149 Sum_probs=281.9
Q ss_pred HHhhccCchHHHHHHHHHH--cCCCeEEcCCccC--C---CCCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHH
Q 015890 9 KRALETEMPIMVQIQELVR--GAKNAVSLAQGVV--Y---WQPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKK 80 (398)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~--~---~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~ 80 (398)
+|+.....+.++++.+... .++++++|+.|.+ . ..+++.+.+++.+.+.+ ...+.|++..+..++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 86 (412)
T 1ajs_A 7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL 86 (412)
T ss_dssp TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHH
Confidence 4455555666777666655 3678999999984 2 24678999999888732 2356788888999999999999
Q ss_pred HhhhcCC--CCCcEEE--ecChHHHHHHHHH--HhccCC-----CEEEEeCCCCcChhhHHHhcCcE-EEEeccCC-CCC
Q 015890 81 LNQENKL--YKSSVMV--TAGANQAFVNIVL--TLCDAG-----DSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS-SKT 147 (398)
Q Consensus 81 l~~~~~~--~~~~v~~--~~g~t~a~~~~~~--~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~-~~~ 147 (398)
+...++. ++++|++ |+|+++|++.++. .++++| |+|+++.|+|+++...++..|.+ ++.+ +.+ +++
T Consensus 87 ~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~ 165 (412)
T 1ajs_A 87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY-RYWDTEK 165 (412)
T ss_dssp HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEE-ECEETTT
T ss_pred HhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEE-eeecCCC
Confidence 9654443 5789999 9999999999964 456789 99999999999999999999999 9988 763 245
Q ss_pred CCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC---Cc--cc--cc
Q 015890 148 LHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG---RK--HC--CV 217 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~---~~--~~--~~ 217 (398)
+.+|++.+++.+++. ++.+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+.+ .. .. ..
T Consensus 166 ~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 245 (412)
T 1ajs_A 166 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS 245 (412)
T ss_dssp TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred CccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc
Confidence 678999999998752 22478888999999999999999999999999999999999999 66654 21 11 11
Q ss_pred cCCcEEEEcccccccCCCcceeEEEEc---cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chH
Q 015890 218 EGDHVVNLFSFSKAYGMMGWRVGYIAY---PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEW 284 (398)
Q Consensus 218 ~~~~~i~~~s~sK~~~~~G~r~G~i~~---~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~ 284 (398)
..++++++.|+||.+|++|+|+||+++ + ++ +++.+.........+++.+.+.++.++|+.. .++
T Consensus 246 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 322 (412)
T 1ajs_A 246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKE---PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred cCCcEEEEEecccccCCCCcceEEEEEecCC---HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence 356789999999999988999999998 6 65 4444444333333446889999999999863 236
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEE
Q 015890 285 VTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 361 (398)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 361 (398)
+++..++++++++.+.+.|++++ .+.+..+.+++|+|+.++ .+++..+++++||.+.++ +|++
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gv~v~~~--------~Ris 388 (412)
T 1ajs_A 323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPS--------GRIN 388 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTT--------SEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC------HHHHHHHHHhCCEEecCC--------cEEE
Confidence 77888899999999999998876 346667777899987664 356666777899999874 6999
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHH
Q 015890 362 FGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 362 ~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
++..+++++++++++|+++++++
T Consensus 389 ~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 389 MCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp GGGCCTTTHHHHHHHHHHHHHHC
T ss_pred eeeCCHHHHHHHHHHHHHHHHhc
Confidence 99657899999999999988753
No 67
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=2.5e-41 Score=318.18 Aligned_cols=351 Identities=19% Similarity=0.132 Sum_probs=272.6
Q ss_pred CchHHHHHHHHHHc--CCCeEEcCCc---cCCCC--CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890 15 EMPIMVQIQELVRG--AKNAVSLAQG---VVYWQ--PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (398)
Q Consensus 15 ~~~~~~~~~~~~~~--g~~~~~l~~g---~~~~~--~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~ 86 (398)
..+.++.+.+...+ .+++++|+.| +++.. +++.+.+++.+ .+.+.....|++..|..++|+.+++++.+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~ 88 (397)
T 3fsl_A 9 AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADH 88 (397)
T ss_dssp CCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTC
T ss_pred CCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCc
Confidence 34444554444433 4679999999 44444 34899999999 88765567898888999999999999976544
Q ss_pred C--CCC--cEEEecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhh
Q 015890 87 L--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTL 159 (398)
Q Consensus 87 ~--~~~--~v~~~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l 159 (398)
. +++ +|++|+|++++++.++ .+++++||+|+++.|+|+++...++..|.+++.+ +. +++++.+|++.+++.+
T Consensus 89 ~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l 167 (397)
T 3fsl_A 89 PVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLATL 167 (397)
T ss_dssp HHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEE-CCEETTTTEECHHHHHHHH
T ss_pred ccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEE-eeeeccCCcCcHHHHHHHH
Confidence 2 577 8999999999999995 4567899999999999999999999999999999 76 2345678999999999
Q ss_pred ccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-c-cc----cccCCcEEEEccccc
Q 015890 160 ETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-K-HC----CVEGDHVVNLFSFSK 230 (398)
Q Consensus 160 ~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~-~~----~~~~~~~i~~~s~sK 230 (398)
+.. +.++++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++. . .. ....+++++++|+||
T Consensus 168 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 247 (397)
T 3fsl_A 168 KTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSK 247 (397)
T ss_dssp TTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTT
T ss_pred HhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccc
Confidence 832 22488888999999999999999999999999999999999999 555421 1 11 123578999999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHH----hhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHH
Q 015890 231 AYGMMGWRVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~ 300 (398)
.+|++|+|+||++++...+++++.+.. .......+++.+.+.++..++... .+++++.++.++++++.+.
T Consensus 248 ~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 327 (397)
T 3fsl_A 248 IFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELV 327 (397)
T ss_dssp TTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999752111555554322 222234556788888888888752 3557788888999999999
Q ss_pred HHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 301 EALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 301 ~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
+.|++++ ++.+..+.+++|+|+.++ . +.+.++++++||.+.||+ ||+++..+++++++++++|
T Consensus 328 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l 393 (397)
T 3fsl_A 328 KVLSTEMPERNFDYLLNQRGMFSYTGLS-----A-AQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAF 393 (397)
T ss_dssp HHHHHHCTTSCCTHHHHCCSSEEECCCC-----H-HHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHH
T ss_pred HHHHhcCCCCCceeecCCceEEEecCCC-----H-HHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHH
Confidence 9998764 457777777899998774 3 345556678999999874 9999876778899999999
Q ss_pred HHH
Q 015890 378 RRG 380 (398)
Q Consensus 378 ~~~ 380 (398)
+++
T Consensus 394 ~~~ 396 (397)
T 3fsl_A 394 AAV 396 (397)
T ss_dssp HHH
T ss_pred Hhh
Confidence 875
No 68
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=2.8e-41 Score=322.57 Aligned_cols=350 Identities=19% Similarity=0.254 Sum_probs=273.7
Q ss_pred cCCCeE-EcCCccCCCCCc--HHHHHHHHHhhcC-------CC----CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCc
Q 015890 28 GAKNAV-SLAQGVVYWQPP--KMAMEKVKELVWD-------PS----ISKYGADEGLPELRDALVKKLNQENK--LYKSS 91 (398)
Q Consensus 28 ~g~~~~-~l~~g~~~~~~~--~~v~~a~~~~~~~-------~~----~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~ 91 (398)
..++++ +|+.|.|...++ +.+.+++.+.+.+ .. ...|++..+..++|+.+++++.+.++ +++++
T Consensus 29 ~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~ 108 (444)
T 3if2_A 29 KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSEN 108 (444)
T ss_dssp HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH
Confidence 347899 999998877422 4555666665554 21 25688888999999999999988765 46889
Q ss_pred EEEecChHHHHHHHHHHhccCCC--------------EEEEe-CCCCcChhhH------HHhcCcEEEEeccCCC-C---
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGD--------------SVVMF-APYYFNSYMS------FQMTGVTHILVGPCSS-K--- 146 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd--------------~Vl~~-~p~~~~~~~~------~~~~g~~~~~~~~~~~-~--- 146 (398)
|++|+|++++++.++.+++++|| +|+++ .|+|+++... +...|..++.+ +.+. +
T Consensus 109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~ 187 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEV-THDGEEGFF 187 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEE-EETTEEEEE
T ss_pred EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEec-ccccccCcc
Confidence 99999999999999999998887 78876 9999888763 45567788877 6654 2
Q ss_pred CCCCChHHHHHh---hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccccC
Q 015890 147 TLHPDADWLEKT---LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCVEG 219 (398)
Q Consensus 147 ~~~~d~e~l~~~---l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~~~ 219 (398)
++.+|++.|++. ++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| ..+.+.. ......
T Consensus 188 ~~~~d~~~l~~~l~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 265 (444)
T 3if2_A 188 KYRVDFEALENLPALKEGR--IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD 265 (444)
T ss_dssp EEECCHHHHHTCHHHHTTC--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred ccCCCHHHHHHHHHhcCCC--ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence 256899999998 4444 599999999999999999999999999999999999999999 3222211 111235
Q ss_pred CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHH
Q 015890 220 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNR 296 (398)
Q Consensus 220 ~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~ 296 (398)
++++++.|+||. +++|+|+||++.+ +++++.+........++.+.+.+.++..+++... .+..+ ..+.+++++
T Consensus 266 ~~~i~~~S~sK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 341 (444)
T 3if2_A 266 NNTILCFSLSKI-GLPGMRTGIIVAD---AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQA 341 (444)
T ss_dssp TTEEEEEESTTT-TCGGGCCEEEECC---HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHH
T ss_pred CCEEEEechhhc-cCCCCceEEEEEC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 688999999997 6799999999998 8888888877766677888999999999988632 22233 455666677
Q ss_pred HHHHHHhcc-CCC--CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----------CCeEEEEec
Q 015890 297 EIIREALSP-LGE--GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFG 363 (398)
Q Consensus 297 ~~l~~~l~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----------~~~iRi~~~ 363 (398)
+.+.+.|.+ ++. +.+..+.+++++|+.++....+..+++..| .++||.+.||+.|.. .++|||+++
T Consensus 342 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~ 420 (444)
T 3if2_A 342 TLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA 420 (444)
T ss_dssp HHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS
T ss_pred HHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEe
Confidence 777666654 332 255667779999999976334677888877 589999999998742 268999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhc
Q 015890 364 GLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 364 ~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
. +++++++++++|.++++++..
T Consensus 421 ~-~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 421 A-DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHHHHHHHHc
Confidence 8 999999999999999988764
No 69
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.4e-41 Score=317.71 Aligned_cols=337 Identities=15% Similarity=0.100 Sum_probs=264.6
Q ss_pred CCeEEcCCccC-CCCC----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEE--ecChHH
Q 015890 30 KNAVSLAQGVV-YWQP----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMV--TAGANQ 100 (398)
Q Consensus 30 ~~~~~l~~g~~-~~~~----~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~g~t~ 100 (398)
.+.++|+.|.+ +... .+.+.+++.+...+.....|.+..|.+++|+++++++.+.++. ++++|++ |+|+++
T Consensus 28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~ 107 (401)
T 7aat_A 28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG 107 (401)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence 45899999986 4432 2467888777665434678988889999999999999876663 4889977 999999
Q ss_pred HHHHHHHHhc---cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhcc-CCCCeEEEEeCCCC
Q 015890 101 AFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPTPKLVSVVNPGN 175 (398)
Q Consensus 101 a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~n 175 (398)
+++.++.++. ++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.+++.++. .++++++++++|||
T Consensus 108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N 186 (401)
T 7aat_A 108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN 186 (401)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCT
T ss_pred HHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEee-eeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 9999887765 899999999999999999999999999998 764 33567899988877763 12358999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--c-c----cccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--H-C----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~-~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~ 246 (398)
|||.+++.+++++|+++|+++|+++|+||+| +.+.+.. . . ....+++++++|+||.||++|+|+||+++..
T Consensus 187 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~ 266 (401)
T 7aat_A 187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVIC 266 (401)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEe
Confidence 9999999999999999999999999999999 6654421 1 1 1235788999999999999999999988621
Q ss_pred CcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCC---CCcccc
Q 015890 247 EVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVKG 313 (398)
Q Consensus 247 ~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~ 313 (398)
..++ +...+.........+++...+.++..++... .+++++.+++++++++++.+.|++++ .+.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 346 (401)
T 7aat_A 267 RDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT 346 (401)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec
Confidence 1145 4455555554455667777887777777652 34467778888999999999998774 246667
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
+.+++|+|+.++ .+.+..+++++||.+.++ +|++++..+++++++++++|++++
T Consensus 347 ~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 347 DQIGMFCFTGLK------PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HCCSSEEECCCC------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCcceEEecCCC------HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence 888899997664 345577778899999764 699999866777999999998765
No 70
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=7.1e-42 Score=332.26 Aligned_cols=346 Identities=18% Similarity=0.243 Sum_probs=278.5
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhh-cC-CC---CCcEEEecChHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQE-NK-LY---KSSVMVTAGANQAFVN 104 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~-~~-~~---~~~v~~~~g~t~a~~~ 104 (398)
++++|+.|.+..+ +|.+++++.+.+.. ..|+ +..|..++++.+++++.+. .+ +. +++|++|+|+++++..
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~ 179 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY 179 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH
Confidence 4788999988886 67777776666654 2354 6789999999999999766 23 32 4689999999999999
Q ss_pred HHHH-----hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC---CCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS---SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 105 ~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
++.+ ++++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.|++.++++ +++|++++|+||
T Consensus 180 ~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~d~~~l~~~l~~~--~k~v~l~~p~NP 256 (533)
T 3f6t_A 180 AFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEV-DLHSYEKNDWEIEPNEIEKLKDPS--IKALIVVNPTNP 256 (533)
T ss_dssp HHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEE-CCCEETTTTSEECHHHHHHHSCTT--EEEEEEESSCTT
T ss_pred HHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEE-EecCCcccCCCCCHHHHHHHhCCC--CeEEEEeCCCCC
Confidence 9998 78999999999999999999889999998888 765 355788999999999865 499999999999
Q ss_pred CccCCCHHHHHHHHHHHH-HcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 177 SGTYIPERLLKRISDLCK-AAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~-~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
||.+++.+++++|+++|+ ++|+++|+||+| +.++.........+++++++|+||.+|++|+|+||+++++. .+++
T Consensus 257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~--~~~~ 334 (533)
T 3f6t_A 257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK--NVFD 334 (533)
T ss_dssp TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESS--CHHH
T ss_pred CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcH--HHHH
Confidence 999999999999999999 689999999999 55543333333356889999999999999999999999852 2222
Q ss_pred HH------------------------------------HHhhccCCCCcchHHHHH----HHHHhc------CCchHHHH
Q 015890 254 QL------------------------------------LKVQDNIPICASIISQHL----ALYSLQ------TGPEWVTE 287 (398)
Q Consensus 254 ~l------------------------------------~~~~~~~~~~~~~~~~~~----~~~~l~------~~~~~~~~ 287 (398)
.+ .........+.+.+.|.+ +..+|. ....++++
T Consensus 335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~ 414 (533)
T 3f6t_A 335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDI 414 (533)
T ss_dssp HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHH
T ss_pred HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHH
Confidence 22 223334456778888887 455564 23477888
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCC
Q 015890 288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGAC 352 (398)
Q Consensus 288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~ 352 (398)
.++.++++++.+.+.|. .+. .+..+.+++|+|++++.. ..+..+++.++++++||.+.||+.|
T Consensus 415 ~~~~~~~r~~~l~~~L~-~~~-~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f 492 (533)
T 3f6t_A 415 ARKLVSERYDQLHDAMQ-APK-DETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGF 492 (533)
T ss_dssp HHHHHHHHHHHHHHHHT-CCC-CCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEE
T ss_pred HHHHHHHHHHHHHHhcC-CCc-cccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCccc
Confidence 99999999999999997 664 666788899999988531 0246678888888899999999988
Q ss_pred CC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 353 GC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 353 ~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+. ++++|+|++..+++++++++++|.++++++.+.
T Consensus 493 ~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 493 GAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp CSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 75 689999998778999999999999999887653
No 71
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.8e-41 Score=310.88 Aligned_cols=322 Identities=19% Similarity=0.248 Sum_probs=257.2
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+|++++||+.|.++++++|++.+++.+.+.. ...|+...+ .++|+.+++++ ++++++|++|+|+++++..++.
T Consensus 13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 13 LSSEIVNFSTTVWTDGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN----SVDNNAILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp ---CCEECSCCSCCCSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT----TCCGGGEEEESHHHHHHHHHHH
T ss_pred ccccEEEccCCCCCCCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence 5689999999999999999999999998743 567865555 88999999887 6788899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
++. ||+|+++.|+|.++...++..|.+++.+ +. ++.+ .+++ ++ +++|++++|+||||.+++.+++
T Consensus 86 ~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~~--------~~--~~~v~i~~p~nptG~~~~~~~l 151 (350)
T 3fkd_A 86 AFR--GSRSLIAIPSFAEYEDACRMYEHEVCFY-PSNEDIG-EADF--------SN--MDFCWLCNPNNPDGRLLQRTEI 151 (350)
T ss_dssp HTT--TCEEEEEESCCHHHHHHHHHTTCEEEEE-ETTSCGG-GSCC--------TT--CSEEEEESSCTTTCCCCCHHHH
T ss_pred HHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEE-ecCCccc-cCcc--------CC--CCEEEEeCCCCCcCCCCCHHHH
Confidence 998 9999999999999999999999999999 77 5422 2232 23 5999999999999999998888
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
.+|+++|+++ ++|+||+| +.+.+... .....+++++++|+||.+|++|+|+||++++ +++++.+.....
T Consensus 152 ~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~-- 224 (350)
T 3fkd_A 152 LRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN---KDFMKRVAAFST-- 224 (350)
T ss_dssp HHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC---HHHHHHHHTTCC--
T ss_pred HHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeC---HHHHHHHHHhCC--
Confidence 8888877655 99999999 55544322 2223578899999999999999999999997 899998887664
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+++.+.+.+.++..+|+....+.++..+.. ++++++.+.|++++++.+.++. ++|+|+.++.. +..++.++|++++
T Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~L~~~~ 300 (350)
T 3fkd_A 225 PWAVNALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKKYMLEEY 300 (350)
T ss_dssp TTCSCHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS--CHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC--CHHHHHHHHHHHC
Confidence 567899999999999986443444443333 7888888989887665665554 77888888754 6788888887449
Q ss_pred CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
||.+++|..|+. ++++||+++ +.+++++++++|++..++
T Consensus 301 gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 301 NMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp CEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 999999998864 689999998 467777777777766543
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.1e-41 Score=319.98 Aligned_cols=359 Identities=16% Similarity=0.157 Sum_probs=277.8
Q ss_pred hHhHHhhccCch-HHHHHHHHHHcCCC-eEEcCCccC-CCCC----cHHHHHHHHHhh--cCCCCCCCCCCCCcHHHHHH
Q 015890 6 KLAKRALETEMP-IMVQIQELVRGAKN-AVSLAQGVV-YWQP----PKMAMEKVKELV--WDPSISKYGADEGLPELRDA 76 (398)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~g~~-~~~l~~g~~-~~~~----~~~v~~a~~~~~--~~~~~~~y~~~~~~~~~~~~ 76 (398)
++..++...+.. .+....+..+++++ .++|+.|.+ +... .+.+.+++.+.. .......|.+..|..++|++
T Consensus 23 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 102 (448)
T 3meb_A 23 SVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA 102 (448)
T ss_dssp CTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred hHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence 444555554443 34444444445544 799999987 5543 355566544443 22346789888999999999
Q ss_pred HHHHHhhhcCCC-----CCcEEE--ecChHHHHHH--HHHHhccCCCEEEEeCCCCcChhhHHH----hcCcEEEEeccC
Q 015890 77 LVKKLNQENKLY-----KSSVMV--TAGANQAFVN--IVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC 143 (398)
Q Consensus 77 l~~~l~~~~~~~-----~~~v~~--~~g~t~a~~~--~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~ 143 (398)
+++++. +.+ +++|++ |+|++++++. .+.+++.+||+|+++.|+|.++...++ ..|.+++.+ +.
T Consensus 103 ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~-~~ 178 (448)
T 3meb_A 103 AQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY-TY 178 (448)
T ss_dssp HHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE-CC
T ss_pred HHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE-ec
Confidence 999983 444 689999 9999999988 555677899999999999999999999 999999999 77
Q ss_pred -CCC-CCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---c-
Q 015890 144 -SSK-TLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---H- 214 (398)
Q Consensus 144 -~~~-~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~- 214 (398)
+++ ++.+|+|.+++.++..+ ..+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++.. .
T Consensus 179 ~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~ 258 (448)
T 3meb_A 179 LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFA 258 (448)
T ss_dssp BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchh
Confidence 655 57899999999998421 2477888899999999999999999999999999999999999 6654411 1
Q ss_pred ---ccccCCcEEEEcccccccCCCcceeEEE--Ec--------cCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHH
Q 015890 215 ---CCVEGDHVVNLFSFSKAYGMMGWRVGYI--AY--------PSEVE----GFATQLLKVQDNIPICASIISQHLALYS 277 (398)
Q Consensus 215 ---~~~~~~~~i~~~s~sK~~~~~G~r~G~i--~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
.....++++++.|+||.||++|+|+||+ ++ ++ + ++++.+.........+++.+.+.++..+
T Consensus 259 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~ 336 (448)
T 3meb_A 259 VRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKN--KALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVI 336 (448)
T ss_dssp HHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred HHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCC--HHHHHHHHHHHHHHHhcccCCccHHHHHHHHHH
Confidence 1123567899999999999999999998 66 42 4 5666666655555667888999999999
Q ss_pred hcCCc------hHHHHHHHHHHHHHHHHHHHhccCC--C------CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890 278 LQTGP------EWVTERVKDLVRNREIIREALSPLG--E------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343 (398)
Q Consensus 278 l~~~~------~~~~~~~~~~~~~~~~l~~~l~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 343 (398)
|.... +.+++.++++.++++.+.+.|++++ . +.+..+.+++|.|+.++ .+++..+++++|
T Consensus 337 l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~g 410 (448)
T 3meb_A 337 VHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT------PEHVDYLKEKWS 410 (448)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC------HHHHHHHHHHHC
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC------HHHHHHHHHhCC
Confidence 87632 3367778888999999999998763 3 45667788899998774 367777878899
Q ss_pred eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
|++.||+ .|||++..+++++++++++|.++++.
T Consensus 411 V~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 411 IYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp EEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9999975 29999876778899999999999874
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3.4e-41 Score=317.19 Aligned_cols=336 Identities=15% Similarity=0.142 Sum_probs=262.7
Q ss_pred cCCCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEE--ecCh
Q 015890 28 GAKNAVSLAQGV---VY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMV--TAGA 98 (398)
Q Consensus 28 ~g~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~--~~g~ 98 (398)
.++++++|+.|. +. .+++|.+.+++.+.+.+...+.|++..+..++|+++++++.+..+ +++++|++ ++|+
T Consensus 24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~ 103 (396)
T 2q7w_A 24 ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGG 103 (396)
T ss_dssp ----CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccc
Confidence 356899999998 22 246799999998876543456798888999999999999965433 34788998 9999
Q ss_pred HHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCC-CCeEEEEeCCC
Q 015890 99 NQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKP-TPKLVSVVNPG 174 (398)
Q Consensus 99 t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~ 174 (398)
+++++.++..+. .+||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.+++.++..+ ..+++++++|+
T Consensus 104 ~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~ 182 (396)
T 2q7w_A 104 TGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH 182 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSC
T ss_pred hhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEE-ecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 999999998764 689999999999999999999999999988 7642 346789999999997532 24778889999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--C--ccc--cccCCcEEEEcccccccCCCcceeEEEEc--
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--R--KHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY-- 244 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~--~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~-- 244 (398)
||||.+++.+++++|+++|+++|+++|+||+| +.+++ . ... ...++++++++|+||.+|++|+|+||+++
T Consensus 183 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~ 262 (396)
T 2q7w_A 183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVA 262 (396)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEc
Confidence 99999999999999999999999999999999 55532 1 111 11246889999999999999999999986
Q ss_pred cCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCC---CCcc
Q 015890 245 PSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAV 311 (398)
Q Consensus 245 ~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~ 311 (398)
++ + ++++.+.........+.+.+.+.++.++|+.. .+++++..+.++++++.+.+.|++++ .+.+
T Consensus 263 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 340 (396)
T 2q7w_A 263 AD--SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSF 340 (396)
T ss_dssp SS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTH
T ss_pred CC--HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcce
Confidence 32 4 34454444333334455889999999998763 24677778888999999999998876 3577
Q ss_pred ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
..+.+++|+|+.++ . +.+..+++++||.+.++ +||+++..+++++++++++|+++
T Consensus 341 ~~~~~~~~~~~~~~-----~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 341 IIKQNGMFSFSGLT-----K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp HHHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred ecCCCceEEEecCC-----H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence 77777889888764 2 44556667899999874 69999966789999999999875
No 74
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=8.5e-41 Score=315.76 Aligned_cols=357 Identities=15% Similarity=0.101 Sum_probs=269.2
Q ss_pred HhHHhhccCch-HHHHHHHHHH-cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890 7 LAKRALETEMP-IMVQIQELVR-GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (398)
Q Consensus 7 ~~~~~~~~~~~-~~~~~~~~~~-~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~ 83 (398)
...|+...+.+ .+....+..+ ...+.++|+.|.+ +...++.+.+++.++.. .....|++..|..++|+++++++..
T Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~ia~~~~~ 94 (409)
T 4eu1_A 16 TQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEAQKLCFG 94 (409)
T ss_dssp -----------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred HhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHHHHHHcC
Confidence 34566654444 3333333333 3467999999997 77778888898888733 3367898889999999999999843
Q ss_pred hcCC--CCCcEE--EecChHHHHHHHH---HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890 84 ENKL--YKSSVM--VTAGANQAFVNIV---LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL 155 (398)
Q Consensus 84 ~~~~--~~~~v~--~~~g~t~a~~~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l 155 (398)
..+. ++++|. .+.|+++++..+. .+++++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.+
T Consensus 95 ~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l 173 (409)
T 4eu1_A 95 PTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPY-SYYDPATKGLNLAGM 173 (409)
T ss_dssp SSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEE-CCEETTTTEECHHHH
T ss_pred CCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEE-EeecCcCCcCcHHHH
Confidence 2221 167774 4889999998764 4456889999999999999999999999999999 763 45678899999
Q ss_pred HHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-----ccc--cccCCcEEEE
Q 015890 156 EKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-----KHC--CVEGDHVVNL 225 (398)
Q Consensus 156 ~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-----~~~--~~~~~~~i~~ 225 (398)
++.++.. ...+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++. ... ....++++++
T Consensus 174 ~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 253 (409)
T 4eu1_A 174 LECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVA 253 (409)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEE
T ss_pred HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEE
Confidence 9999732 22467777899999999999999999999999999999999999 665541 111 1234678999
Q ss_pred cccccccCCCcceeEEE--EccCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYI--AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLV 293 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~ 293 (398)
+|+||.+|++|+|+||+ +..+ ++ +++.+.........+++.+.+.++..+++.. .+.+++.++.+.
T Consensus 254 ~S~SK~~g~~G~riG~~~~v~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 331 (409)
T 4eu1_A 254 QSFSKNFGLYGHRCGALHISTAS--AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIA 331 (409)
T ss_dssp EECTTTSSCGGGCCEEEEEECSS--HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccccCccCCceEEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 5553 66 6666665554455677889999999988863 234677788899
Q ss_pred HHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHH
Q 015890 294 RNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 370 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~ 370 (398)
++++.+.+.|++++. +.+..+.+++|+|+.++ .+++.++++++||.+.|+ .||+++..+++++
T Consensus 332 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gv~v~p~--------~Ri~~~~~~~~~i 397 (409)
T 4eu1_A 332 EVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT------REQVELLRSEYHIYMTLN--------GRAAVSGLNSTNV 397 (409)
T ss_dssp HHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTH
T ss_pred HHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC------HHHHHHHHHcCCEEEcCC--------CEEEEEecCHhhH
Confidence 999999999988763 46667788899986653 356777887889999986 3899988777889
Q ss_pred HHHHHHHHHHH
Q 015890 371 KAAADRLRRGL 381 (398)
Q Consensus 371 ~~~~~~l~~~~ 381 (398)
++++++|.+++
T Consensus 398 ~~~~~~l~~~l 408 (409)
T 4eu1_A 398 EYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998765
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.2e-39 Score=303.74 Aligned_cols=326 Identities=21% Similarity=0.310 Sum_probs=265.0
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~ 107 (398)
.+||+.|.++++++|++.+++.+.+.+. ....|+...+ .++++.+++++++.+| +++++|++++|++++++.++.
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~ 110 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ 110 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence 4899999999889999999999887541 2456755545 7999999999988754 467899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
+++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++.+++.+++ + +++|++++|+||||.++| +
T Consensus 111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---~ 183 (369)
T 3cq5_A 111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAV-SRGA-DFRIDMDVALEEIRAKQ--PDIVFVTTPNNPTGDVTS---L 183 (369)
T ss_dssp HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEE-ECCT-TSSCCHHHHHHHHHHHC--CSEEEEESSCTTTCCCCC---H
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCc-CCCCCHHHHHHHhhccC--CCEEEEeCCCCCCCCCCC---H
Confidence 999999999999999999999999999999998 7653 457899999999986 4 489999999999999999 5
Q ss_pred HHHHHHHHHcCCEEEEeece--eccCCCcccc-ccCC-cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-VEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~~~~-~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
+++.++|+.+++++|+||+| +.+....... ...+ ++++++|+||.+|++|+|+||++++ +++++.+.....
T Consensus 184 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~-- 258 (369)
T 3cq5_A 184 DDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN---PAFIDAVMLVRL-- 258 (369)
T ss_dssp HHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC---THHHHHHHTTSC--
T ss_pred HHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC---HHHHHHHHHcCC--
Confidence 55555556667999999999 4432111111 2235 7899999999999899999999998 678888876554
Q ss_pred CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 342 (398)
+++.+.+.+.++..+++. .+++++..+.++++++++.+.|++.+. .+.++. ++|+|+.++ .+..++.++| .++
T Consensus 259 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~---~~~~~l~~~l-~~~ 331 (369)
T 3cq5_A 259 PYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEELGY-AVVPSE-SNFVFFGDF---SDQHAAWQAF-LDR 331 (369)
T ss_dssp TTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHHTC-EEECCS-SSEEEEECC---SSHHHHHHHH-HHT
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-EECCCC-CeEEEEECC---CCHHHHHHHH-HHC
Confidence 467889999999999986 567788888899999999999887553 555444 778888886 2567788877 489
Q ss_pred CeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 343 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
||.+.+| +.++++|++++ +++++++++++|.++++
T Consensus 332 gi~v~~~---~~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 332 GVLIRDV---GIAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp TEECBCC---SCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred CEEEEEC---CCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 9999998 24689999998 58889999999887753
No 76
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-40 Score=323.58 Aligned_cols=345 Identities=19% Similarity=0.276 Sum_probs=266.1
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-hhhcCC-----CCCcEEEecChHHHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENKL-----YKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l-~~~~~~-----~~~~v~~~~g~t~a~~~~ 105 (398)
+++|+.|.+.+ +++.+.+++.+.+.. ..|++..|..++++.+++++ .+.++. ++++|++|+|+++++..+
T Consensus 106 ~i~l~~g~~~~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~ 181 (546)
T 2zy4_A 106 SLSYVRDQLGL-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYI 181 (546)
T ss_dssp HHHHHHHTSCC-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHH
T ss_pred hhecccCCCCC-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHH
Confidence 78999998877 467777777776642 57988888999998877654 454432 357999999999999999
Q ss_pred HHH-----hccCCCEEEEeCCCCcChhhHHHh--cCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 106 VLT-----LCDAGDSVVMFAPYYFNSYMSFQM--TGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 106 ~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
+.+ ++++||+|+++.|+|+++...+.. .|++++.+ +.+++ ++.+|++.|++.++.+ +++|++++|+|||
T Consensus 182 ~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~--~k~v~l~~p~NPt 258 (546)
T 2zy4_A 182 FESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAI-NADPSLNWQYPDSELDKLKDPA--IKIFFCVNPSNPP 258 (546)
T ss_dssp HHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEE-ECBGGGTTBCCHHHHGGGGSTT--EEEEEEESSCSSS
T ss_pred HHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEE-ecCcccCCCCCHHHHHHhhCCC--CeEEEEECCCCCC
Confidence 988 478999999999999999887554 46888888 76544 5789999999987654 5999999999999
Q ss_pred ccCCCHHHHHHHHHHH--HHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 178 GTYIPERLLKRISDLC--KAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~--~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
|.+++.+++++|+++| +++|+++|+||+| +.++.........+++++++|+||.+|++|+|+||+++++ +++++
T Consensus 259 G~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~~l~~ 336 (546)
T 2zy4_A 259 SVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQ--QNVFD 336 (546)
T ss_dssp CBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEES--SCHHH
T ss_pred CccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECC--HHHHH
Confidence 9999999999999999 7899999999999 4433222222223689999999999999999999999884 23555
Q ss_pred HHHHh-------------h-----------------------ccCCCCcchHHHHHH-----HHHhcCCchHHHHHHHHH
Q 015890 254 QLLKV-------------Q-----------------------DNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL 292 (398)
Q Consensus 254 ~l~~~-------------~-----------------------~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ 292 (398)
.+... . .....+.+.+.|.++ .++++..+.+.++.++.+
T Consensus 337 ~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~ 416 (546)
T 2zy4_A 337 LALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLI 416 (546)
T ss_dssp HHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 55211 0 022345677777764 244554567788888889
Q ss_pred HHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCCCC-CC
Q 015890 293 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG 356 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~ 356 (398)
+++++.+.+.|. .+. .+..+.+++|+|++++.. ..++.+++.+++.++||.+.||+.|+. ++
T Consensus 417 ~~r~~~l~~~L~-~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~ 494 (546)
T 2zy4_A 417 RRRETTLYRELG-MPP-LRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRP 494 (546)
T ss_dssp HHHHHHHHGGGT-SSC-CCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSC
T ss_pred HHHHHHHHHhcC-CCc-ccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCC
Confidence 999999999886 443 445677788999987520 013445566677899999999999864 56
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 357 HLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
++||+++.++++++++++++|+++++++.++
T Consensus 495 ~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~ 525 (546)
T 2zy4_A 495 SGRASLANLNEYEYAAIGRALRKMADELYAE 525 (546)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999778899999999999999887643
No 77
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.3e-40 Score=311.31 Aligned_cols=350 Identities=14% Similarity=0.125 Sum_probs=268.8
Q ss_pred ccCchHHHHHHHHHH--cCCCeEEcCCccC---C--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890 13 ETEMPIMVQIQELVR--GAKNAVSLAQGVV---Y--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 13 ~~~~~~~~~~~~~~~--~g~~~~~l~~g~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~ 85 (398)
....+.++.+.+... .++++++|+.|.+ . ..+++.+.+++.+.+.+.....|++..+..++|+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~- 85 (394)
T 2ay1_A 7 PQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD- 85 (394)
T ss_dssp CCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-
T ss_pred cCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-
Confidence 333344444443333 3578999999984 2 2567999999988765434667988889999999999998432
Q ss_pred CCCCCcEEE--ecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890 86 KLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (398)
Q Consensus 86 ~~~~~~v~~--~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~ 160 (398)
+.++++|++ ++|+++|++.++.++.. +||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.+++.++
T Consensus 86 ~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~ 164 (394)
T 2ay1_A 86 GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADLA 164 (394)
T ss_dssp GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHHH
T ss_pred CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEE-ecccccCCccCHHHHHHHHH
Confidence 236789999 99999999999988764 89999999999999999999999999988 7642 346789999999997
Q ss_pred cCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--C--ccc--cccCCcEEEEcccccc
Q 015890 161 TKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--R--KHC--CVEGDHVVNLFSFSKA 231 (398)
Q Consensus 161 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~--~~~--~~~~~~~i~~~s~sK~ 231 (398)
..+ ..+++++++|+||||.+++.+++++|+++|+++|+++|+||+| +.+++ . ... ....+++++++|+||.
T Consensus 165 ~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 244 (394)
T 2ay1_A 165 AAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKN 244 (394)
T ss_dssp TCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTT
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCC
Confidence 542 2367777899999999999999999999999999999999999 55432 1 111 1124678999999999
Q ss_pred cCCCcceeEEEEc--cCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHH
Q 015890 232 YGMMGWRVGYIAY--PSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREII 299 (398)
Q Consensus 232 ~~~~G~r~G~i~~--~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l 299 (398)
+|++|+|+||+++ ++ +++++.+ .........+++.+.+.++.++|+.. .+++++..+.++++++.+
T Consensus 245 ~~~~G~riG~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 322 (394)
T 2ay1_A 245 FGIYRERTGCLLALCAD--AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL 322 (394)
T ss_dssp TTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCccceEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 32 5554433 32222333445888999999988763 246778888889999999
Q ss_pred HHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890 300 REALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 376 (398)
Q Consensus 300 ~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 376 (398)
.+.|++++ .+.+..+.+++|+|+.++ . +.+.++++++||.+.++ +|++++..+++++++++++
T Consensus 323 ~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~-~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~ 388 (394)
T 2ay1_A 323 AGELRDLSGSDRFGFVAEHRGMFSRLGAT-----P-EQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARA 388 (394)
T ss_dssp HHHHHHHHTSSTTTHHHHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHH
T ss_pred HHHHHhcCCCCCeeEEcCCceEEEeeCCC-----H-HHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHH
Confidence 99988765 356666777899998764 2 34455667899999874 5999986688999999999
Q ss_pred HHHH
Q 015890 377 LRRG 380 (398)
Q Consensus 377 l~~~ 380 (398)
|+++
T Consensus 389 l~~~ 392 (394)
T 2ay1_A 389 IIEV 392 (394)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8865
No 78
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.3e-39 Score=299.32 Aligned_cols=314 Identities=22% Similarity=0.312 Sum_probs=254.1
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.|.+++++|+.+.+++.+.+.......|+ ..+..++|+.+++++.+. .+++++|++++|+++++..++.++
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~-~~~~~~v~~~~G~~~al~~~~~~~ 96 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY-DSPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYVMMLMF 96 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHHHHHHHTCS-SCCGGGEEEESSHHHHHHHHHHHS
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHHHHHHcCCC-CCCHHHEEEcCChHHHHHHHHHHh
Confidence 468999999998888999999999987433355674 446899999999998543 367889999999999999999998
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
||+|+++ |+|+++...++..|.+++.+ +.+++ +.+|++.+ ++ +++|++++|+||||.+++.+++++|
T Consensus 97 ---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l-----~~--~~~v~l~~p~nptG~~~~~~~l~~l 163 (335)
T 1uu1_A 97 ---DRSVFFP-PTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVNV-----GE--GDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_dssp ---SEEEECS-SSCHHHHHHHHHHTCEEEEC-CCCTT-SCCCCCCC-----CT--TEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred ---CCcEEEC-CCcHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHc-----CC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8999999 99999999999999999998 77543 56787776 23 5999999999999999998877777
Q ss_pred HHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890 190 SDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 267 (398)
+++| | ++|+||+| +.+..........+++++++|+||.+|++|+|+||++++ +++++.+..... +++.+
T Consensus 164 ~~~~---~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~~~ 234 (335)
T 1uu1_A 164 LKTG---A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL--PFNVS 234 (335)
T ss_dssp HHTT---C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC---HHHHHHHHHHSC--TTCSC
T ss_pred HHhC---C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC---HHHHHHHHHhcC--CCCcC
Confidence 7766 7 89999999 443211111223567899999999999999999999998 888888877654 46889
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347 (398)
Q Consensus 268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 347 (398)
.+.+.++.++|+. .+++++..++++++++++.+.|++++. .+. +.+++|+|+.++. .+..++.+.|. ++||.+.
T Consensus 235 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~ 308 (335)
T 1uu1_A 235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RIT-DSRGNFVFVFMEK--EEKERLLEHLR-TKNVAVR 308 (335)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBC-CCCSSEEEEECCT--HHHHHHHHHHH-HHTEEEE
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCc-EEc-CCCCeEEEEECCC--CCHHHHHHHHH-HCCEEEE
Confidence 9999999999986 457788888899999999999987753 554 4447889999874 24567778776 7899999
Q ss_pred cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
+ .++++|++++. .+++++++++|+++
T Consensus 309 ~-----~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 309 S-----FREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp E-----ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred E-----CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 8 36799999975 57788888888653
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.4e-40 Score=311.99 Aligned_cols=327 Identities=20% Similarity=0.176 Sum_probs=253.2
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhc-C--CCCCCCCCCCCc-----HHHHHHHHHHHhhhcCC--CC-CcEEEec
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVW-D--PSISKYGADEGL-----PELRDALVKKLNQENKL--YK-SSVMVTA 96 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~-~--~~~~~y~~~~~~-----~~~~~~l~~~l~~~~~~--~~-~~v~~~~ 96 (398)
++.+.++|+.|.++++.|+.+.+++.+... . .....|++..|. .++|++++++++. +++ ++ ++|++|+
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i~~t~ 98 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYIVVGT 98 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEEEEEE
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEeC
Confidence 567899999999987766666666533331 1 135679888898 9999999999874 343 35 5899999
Q ss_pred ChHHHHHHHHHHhccCCC----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 97 GANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 97 g~t~a~~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
|+++++..++.+++++|| +|+++.|+|.++...++..|.+++.+ +.+.+++. .++ +++|++++
T Consensus 99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~----------~~~--~k~v~l~~ 165 (391)
T 3bwn_A 99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKW-EGDAWGFD----------KKG--PYIELVTS 165 (391)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEE-EEESTTCC----------CCS--CEEEEEES
T ss_pred ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEe-cCCHHHcC----------CCC--CEEEEECC
Confidence 999999999999999999 99999999999999999999988888 66654432 122 59999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEc-cCCcHHH
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY-PSEVEGF 251 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~-~~~~~~~ 251 (398)
||||||.+++ +|++.++++++++|+||+|.. ..........+++++++|+||.+|++|+|+||+++ + +++
T Consensus 166 p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~-~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~---~~l 236 (391)
T 3bwn_A 166 PNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW-PHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVKD---KEV 236 (391)
T ss_dssp SCTTTCCCCC-----CCC-----CCCEEEEECTTCS-TTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECC---HHH
T ss_pred CCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC-CCCCccccCCCCeEEEEechhhcCCCccceEEEEecC---HHH
Confidence 9999999986 344422333499999999932 11111111356789999999999999999999997 6 788
Q ss_pred HHHHHHhhccCCCCcchHHHHHHHHHhcCC----------chHHHHHHHHHHHHHHHHHHHhccCCCCccccC-------
Q 015890 252 ATQLLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGG------- 314 (398)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~------- 314 (398)
++.+........++.+.+.|.++..+|+.+ +.++++.++.++++++.+.+.|++++++.+..+
T Consensus 237 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f 316 (391)
T 3bwn_A 237 AKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNY 316 (391)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETT
T ss_pred HHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc
Confidence 888887776556788999999999999753 457888899999999999999988754444333
Q ss_pred ------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 315 ------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 315 ------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.+++|+|++++.. +.+.++++++||.++||+.|+. ++++|||++. +++++++++++|.+++++
T Consensus 317 ~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 317 FGKSLESYPAFAWLGTKEE-----TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANMKLI 386 (391)
T ss_dssp TTEEECCCCSEEEEEESSS-----CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred ccccCCCcceEEEecCCcH-----HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 3355899998741 2344456789999999999875 6899999996 888999999999887654
No 80
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=5e-38 Score=294.26 Aligned_cols=366 Identities=15% Similarity=0.143 Sum_probs=266.8
Q ss_pred hhHhHHhhc---cCchHHHHHHHHH-HcCCCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 015890 5 AKLAKRALE---TEMPIMVQIQELV-RGAKNAVSLAQGV---VY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRD 75 (398)
Q Consensus 5 ~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~ 75 (398)
|+.+.|... .+...+..+.+.+ +++++.|||++|. .. .++.|.|.+|....+.....+.|.|..|.+++|+
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ 94 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFID 94 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHH
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHH
Confidence 567777663 3344455544444 4556689999994 21 1345889998887777665667999999999999
Q ss_pred HHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHh----ccCCCEEEEeCCCCcChhhHHHhcCcEEE-EeccCCCCCC
Q 015890 76 ALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSYMSFQMTGVTHI-LVGPCSSKTL 148 (398)
Q Consensus 76 ~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~ 148 (398)
++++++.... ...+ ..+-|.|+|.|+..++..+ .++||+|++++|+|++|...++..|.+.+ .+...+.+++
T Consensus 95 aia~~~~g~~-~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 95 EAVKIIYGNT-VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHHHC----CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHHHhcCCC-ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 9999874322 2222 3445788888887666654 47999999999999999999999998643 3312334456
Q ss_pred CCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-------ccc
Q 015890 149 HPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-------CVE 218 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-------~~~ 218 (398)
.+|.+.+.+.+...+ +.+++++.+|+||||..++.+++++|+++|+++++++|+|++| |.+++.... ...
T Consensus 174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~ 253 (420)
T 4h51_A 174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR 253 (420)
T ss_dssp EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence 778888888876322 2366677789999999999999999999999999999999999 666543221 123
Q ss_pred CCcEEEEcccccccCCCcceeEEEEccCCcHHHH----HHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHH
Q 015890 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA----TQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTER 288 (398)
Q Consensus 219 ~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~ 288 (398)
.++++++.|+||.|+++|+|+||++++....+.. ..+.........+++...+.++...+.+. ...++.+
T Consensus 254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m 333 (420)
T 4h51_A 254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM 333 (420)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 5678999999999999999999988775323322 23333444556778888888888888752 1345667
Q ss_pred HHHHHHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCC
Q 015890 289 VKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGL 365 (398)
Q Consensus 289 ~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~ 365 (398)
++++.++++.+.+.|++++. +..+.+++|+|.|..+. .+.++ +|+++||++.+++ |||++..
T Consensus 334 ~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls------~e~v~-~L~e~~Vy~~~~g--------Ris~Agl 398 (420)
T 4h51_A 334 AERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS------KAQCE-YCQNHNIFITVSG--------RANMAGL 398 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC------HHHHH-HHHHTTEECCTTC--------EEEGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC------HHHHH-HHHhCCEEEcCCC--------EEEeccC
Confidence 78888899999999987653 34455667999987664 24455 4579999998863 9999988
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++.++.++++|.++++++.+
T Consensus 399 ~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 399 THETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp CHHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHHHHhhc
Confidence 899999999999999988765
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=7.1e-40 Score=310.14 Aligned_cols=326 Identities=17% Similarity=0.124 Sum_probs=262.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC--CCCCCCC-C---cHHHHHHHHHHHhhhcC--CCCCcEEEecChHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI--SKYGADE-G---LPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~-~---~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a 101 (398)
...++|+.|.+++++|+.+.+++.+.+..... ..|++.. | ..++|+++++++.+..+ +++++|++|+|++++
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 46899999999988788888898887732222 3487777 8 89999999999987654 568899999999999
Q ss_pred HHHHHHHh--------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 102 FVNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 102 ~~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
+..++.++ +++||+|+++.|+|..+...++..|.+++.+ .+|++.|++.++++ +++|++++|
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~--~k~v~l~~p 205 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPE--QYIEMVTSP 205 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGG--GEEEEEESS
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCC--ceEEEEcCC
Confidence 99999999 8999999999999999999999999876644 35788888888765 499999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
+||||.+++ +.+ + ++..+.|++++. ..........+++++++|+||.+|++|+|+||+++++ +++++
T Consensus 206 ~NPtG~~~~-~~l-------~--~~~~i~d~~~~~-~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--~~l~~ 272 (427)
T 2hox_A 206 NNPEGLLRH-AVI-------K--GCKSIYDMVYYW-PHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESVYN 272 (427)
T ss_dssp CTTTCCCCC-CSS-------T--TCEEEEECTTCS-TTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHHHH
T ss_pred CCCcccccH-HHH-------c--CCCEEEeecccC-CCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC--HHHHH
Confidence 999999999 422 2 556777876642 1111111125678999999999999999999999954 78889
Q ss_pred HHHHhhccCCCCcchHHHHHHHHHhcCC-----------chHHHHHHHHHHHHHHHHHHHhccCCCCcc-----------
Q 015890 254 QLLKVQDNIPICASIISQHLALYSLQTG-----------PEWVTERVKDLVRNREIIREALSPLGEGAV----------- 311 (398)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----------- 311 (398)
.+.........+.+.+.|.++..+|+.. ++++++.++.++++++.+.+.|++.+++.+
T Consensus 273 ~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 352 (427)
T 2hox_A 273 NLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNY 352 (427)
T ss_dssp HHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETT
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccccccc
Confidence 8888776666788999999988888752 245667788889999999999988743232
Q ss_pred ---ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 312 ---KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 312 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
..|.+++|+|++++. +..+++..+++++||.++||..|+. +++||||++. +++++++++++|.++++
T Consensus 353 ~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 353 FRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp TTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 345668999999974 3456777787789999999998875 7899999997 88999999999988764
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=8.5e-38 Score=294.19 Aligned_cols=334 Identities=14% Similarity=0.113 Sum_probs=263.9
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+++++|+.|.+ ++++++.+.+++.+.+... ....|....|..++++.+++++.+.++. +++++++|+++++..
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG 118 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 4677999999987 6667899999998887542 1234555667788999999999888775 589999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~nptG~~~~ 182 (398)
++.+++++||.|+++.|+|..+...++..|.+++.+ +. +|+++|++.++... ++++|++++|+||||.+++
T Consensus 119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v-~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 191 (398)
T 3a2b_A 119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKY-GH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN 191 (398)
T ss_dssp HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEe-CC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC
Confidence 999999999999999999999999999999999988 54 48899999997531 3699999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccC--CCccccc-c-CCc-EEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYD--GRKHCCV-E-GDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~--~~~~~~~-~-~~~-~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+++|.++|+++|+++|+||+| +.++ +...... . .++ +++++|+||.++++| ||++++ +++++.+
T Consensus 192 ---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~l 262 (398)
T 3a2b_A 192 ---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD---ADVIDFL 262 (398)
T ss_dssp ---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC---HHHHHHH
T ss_pred ---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC---HHHHHHH
Confidence 999999999999999999999 3332 2221111 1 124 699999999999777 999998 7888888
Q ss_pred HHh-hccCCCCcchHHHH-HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890 256 LKV-QDNIPICASIISQH-LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 256 ~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (398)
... ......+.+.+.+. ++..+++. .++.++.++.++++++.+.+.|++++. .+..+. ++++|+.++.. .+..+
T Consensus 263 ~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-g~~~~~~~~~~-~~~~~ 338 (398)
T 3a2b_A 263 KHNARSVMFSASMTPASVASTLKALEI-IQNEPEHIEKLWKNTDYAKAQLLDHGF-DLGATE-SPILPIFIRSN-EKTFW 338 (398)
T ss_dssp HHHCHHHHSSBCCCHHHHHHHHHHHHH-HHHCTHHHHHHHHHHHHHHHHHHHTTC-CBCSCC-SSEEEEECCCH-HHHHH
T ss_pred HHhcccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHhcCC-CcCCCC-CCEEEEEcCCH-HHHHH
Confidence 764 22223344455554 45577765 344567788888899999999988754 666665 78899998642 24567
Q ss_pred HHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+..+|+ ++||.+.++..|. ..+++|++++. .+++++++++++|+++++++
T Consensus 339 l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 339 VTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 888776 6699999998775 35789999997 68999999999999998765
No 83
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=8.1e-37 Score=286.99 Aligned_cols=321 Identities=16% Similarity=0.116 Sum_probs=255.6
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
++.++++++.+++.+.+.+ .|++. ..++++.+++++.+.+|.+++ ++++++|+++++..++.+++++||+|++
T Consensus 41 ~~~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~ 114 (393)
T 1vjo_A 41 GPSNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLI 114 (393)
T ss_dssp SCCCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence 4556789999999876543 35332 467888999999888898877 8999999999999999999999999999
Q ss_pred eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
+.|+|++ +...++..|.+++.+ +.+.+ +.+|++.|++.+++ ++ ++|++++|+||||.+.+ +++|.++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~ 187 (393)
T 1vjo_A 115 GVAGYFGNRLVDMAGRYGADVRTI-SKPWG-EVFSLEELRTALETHRP--AILALVHAETSTGARQP---LEGVGELCRE 187 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EcCChhHHHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHhhCCc--eEEEEeccCCCcceecc---HHHHHHHHHH
Confidence 9999998 888889999999999 77654 56899999999986 54 89999999999999999 8999999999
Q ss_pred cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-----------
Q 015890 196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q----------- 259 (398)
Q Consensus 196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~----~----------- 259 (398)
+|+++|+||+| ++... ......+.+++++|+||+++.++ |+||++++ +++++.+... .
T Consensus 188 ~~~~li~Dea~~~g~~~--~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
T 1vjo_A 188 FGTLLLVDTVTSLGGVP--IFLDAWGVDLAYSCSQKGLGCSP-GASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGK 261 (393)
T ss_dssp HTCEEEEECTTTTTTSC--CCTTTTTCSEEECCSSSTTCSCS-SCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred cCCEEEEECCccccCcC--CcccccCccEEEEcCcccccCCC-ceEEEEEC---HHHHHHHhccCCCCCceecCcHhhhh
Confidence 99999999999 54322 22223355788999999998677 99999999 7787777432 0
Q ss_pred ----ccCCC-CcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCC
Q 015890 260 ----DNIPI-CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLD 330 (398)
Q Consensus 260 ----~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 330 (398)
....+ +.+.+.+.++..+++.. ..++++..++++++++++.+.|++.+ +.+..+.+ +.++++.++.. .+
T Consensus 262 ~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~ 339 (393)
T 1vjo_A 262 YWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDG-VD 339 (393)
T ss_dssp HHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTT-CC
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCC-CC
Confidence 02233 67888898888888752 23467788889999999999998874 46665543 35677777643 36
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~ 381 (398)
..++.+.|++++||.+.+|..|..++++||++ +. .+++++++++++|++++
T Consensus 340 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 340 GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 77888888744599999999887789999995 33 46778999999998875
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=8.2e-36 Score=279.36 Aligned_cols=325 Identities=14% Similarity=0.129 Sum_probs=256.9
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
+...++.+.+++.+.+.+ .|++. ..++++.+++++.+.+|.+ ++++++++|+++|+..++.+++++||+|+++
T Consensus 28 ~~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~ 101 (386)
T 2dr1_A 28 PVACFPEVLEIMKVQMFS----HRSKE--YRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT 101 (386)
T ss_dssp SCCCCHHHHHHTTSCCCC----TTSHH--HHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CcCCcHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence 345688898888766532 35322 3678889999998888886 6779999999999999999999999999999
Q ss_pred CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
.|+|++ +...++..|++++.+ +.+. ++.+|+++|++.++...++++|++++|+||||.+.+ +++|.++|+++|
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 176 (386)
T 2dr1_A 102 IIGAFGKRYKEVVESNGRKAVVL-EYEP-GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD 176 (386)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEE-ECCT-TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHhCCceEEE-ecCC-CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence 999988 888889999999999 7765 356899999999953223699999999999999998 899999999999
Q ss_pred CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH----------------Hh--
Q 015890 198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL----------------KV-- 258 (398)
Q Consensus 198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~----------------~~-- 258 (398)
+++|+|++| +..... .....+.+++++|+||+++.+ .++||++++ +++++.+. ..
T Consensus 177 ~~li~D~a~~~~~~~~--~~~~~~~di~~~s~sK~~~~~-~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (386)
T 2dr1_A 177 KLVFVDAVSAMGGADI--KFDKWGLDVVFSSSQKAFGVP-PGLAIGAFS---ERFLEIAEKMPERGWYFDIPLYVKYLKE 250 (386)
T ss_dssp CEEEEECTTTBTTBCC--CTTTTTCSEEEEETTSTTCCC-SSCEEEEEC---HHHHHHHTTCTTCCSTTCHHHHHHHHHH
T ss_pred CeEEEEccccccCccc--cccccCCcEEEEeccccccCC-CceEEEEEC---HHHHHHHhcCCCCceEEeHHHHHHhhcc
Confidence 999999999 432211 122235679999999999855 248999999 67777652 11
Q ss_pred hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCCCCChHH
Q 015890 259 QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 333 (398)
.....++.+.+.+.++..+++.... .+++..++++++++++.+.|++++ +.+..+. .++++++.++.. .+..+
T Consensus 251 ~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 328 (386)
T 2dr1_A 251 KESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPG-IKGDE 328 (386)
T ss_dssp HSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTT-CCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCC-CCHHH
Confidence 1234567788889888888875222 367788889999999999998874 3555553 367888888743 36778
Q ss_pred HHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+.++|. ++||.+.+|..+..++++|++++. .+++++++++++|+++++++.
T Consensus 329 ~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 329 VYEAMR-KRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp HHHHHH-HTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 888886 569999999876667899999996 789999999999999998764
No 85
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.6e-36 Score=284.95 Aligned_cols=335 Identities=17% Similarity=0.156 Sum_probs=252.0
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC------CCCCCC--CCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGA--DEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQ 100 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~ 100 (398)
+++++|+.|.++ +.|+.+.+++.+.+.+.. ...|+. ..+..++++.+++++ +. +++++++++|+++
T Consensus 27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~ 101 (420)
T 1t3i_A 27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI----NARSPREIVYTRNATE 101 (420)
T ss_dssp EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEcCChHH
Confidence 448999999987 678999999998875421 122322 244566677777665 55 6789999999999
Q ss_pred HHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890 101 AFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 101 a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~ 172 (398)
|+..++.++ +++||+|+++.|+|++ +...++..|.+++.+ +.+. ++.+|++.++++++++ +++|++++
T Consensus 102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~--~~~v~~~~ 177 (420)
T 1t3i_A 102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDE-QESFDLEHFKTLLSEK--TKLVTVVH 177 (420)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCT-TSSBCHHHHHHHCCTT--EEEEEEES
T ss_pred HHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe-ccCC-CCCcCHHHHHHhhCCC--ceEEEEeC
Confidence 999999999 8999999999999998 456677889999999 7764 4568999999999865 49999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
|+||||.+++ +++|.++|+++|+++|+|++| ++.... .....+.+++++|+||.+|++| +||++++ +++
T Consensus 178 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~~~~di~~~s~sK~~~~~g--~G~~~~~---~~~ 247 (420)
T 1t3i_A 178 ISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYPL--DVQLIDCDWLVASGHKMCAPTG--IGFLYGK---EEI 247 (420)
T ss_dssp BCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCC--CHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---HHH
T ss_pred CcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCccC--chhhcCCCEEEEehhhhcCCCc--eEEEEEc---hHH
Confidence 9999999999 899999999999999999999 433211 1111235688999999888666 8999998 788
Q ss_pred HHHHHHhhcc--------------------CCCCcchHHHHHHHH-HhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890 252 ATQLLKVQDN--------------------IPICASIISQHLALY-SLQTGP-EWVTERVKDLVRNREIIREALSPLGEG 309 (398)
Q Consensus 252 ~~~l~~~~~~--------------------~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~ 309 (398)
++.+...... +..+.+.+.+.++.. +++... .++++..++++++++.+.+.|++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 327 (420)
T 1t3i_A 248 LEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQL 327 (420)
T ss_dssp HHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred HhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8777544321 112344455544333 454311 235677888888999999999887555
Q ss_pred ccccCC-----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHH
Q 015890 310 AVKGGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD 375 (398)
Q Consensus 310 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~ 375 (398)
.+..+. .+.++++.++. .+..++.+.| .++||.+.+|..| +.++++|++++. .++++++++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~ 404 (420)
T 1t3i_A 328 RLYGPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQ 404 (420)
T ss_dssp EEESCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHH
T ss_pred EEeCCCccccccCCEEEEEECC--CCHHHHHHHH-HHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHH
Confidence 666553 24555566753 3566777655 5889999998644 236899999997 68999999999
Q ss_pred HHHHHHHHHhc
Q 015890 376 RLRRGLEELVK 386 (398)
Q Consensus 376 ~l~~~~~~~~~ 386 (398)
+|.++++.+.+
T Consensus 405 ~l~~~~~~~~~ 415 (420)
T 1t3i_A 405 SLQATIRFFSD 415 (420)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHhcC
Confidence 99999987654
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=4.2e-36 Score=283.20 Aligned_cols=333 Identities=16% Similarity=0.164 Sum_probs=249.2
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC--CCC------CCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISK------YGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGAN 99 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~------y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t 99 (398)
|++++.|+.+.++ +.|+.+.+++.+.+.+.. .+. |.+..+..++++.+++++ +. ++++|++++|++
T Consensus 21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t 95 (406)
T 1kmj_A 21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NARSAEELVFVRGTT 95 (406)
T ss_dssp TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEeCChh
Confidence 4578999999887 578999999998876421 111 112344556666666665 66 578999999999
Q ss_pred HHHHHHHHHh----ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890 100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
+++..++.++ +++||+|+++.|+|++.. ..++..|.+++.+ +.+++ +.+|++.|++.++++ +++|+++
T Consensus 96 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~--~~~v~~~ 171 (406)
T 1kmj_A 96 EGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPTLFDEK--TRLLAIT 171 (406)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTT-SCBCGGGHHHHCCTT--EEEEEEE
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE-ecCCC-CCcCHHHHHHHhccC--CeEEEEe
Confidence 9999999999 889999999999997654 3467789999998 77653 568999999999865 4999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
+|+||||.+++ +++|.++|+++|+++|+||+| .+.... .....+.+++++|+||.+|++| +||++++ ++
T Consensus 172 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~~--~~~~~~~d~~~~s~~K~~g~~G--~G~~~~~---~~ 241 (406)
T 1kmj_A 172 HVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHPV--DVQALDCDFYVFSGHKLYGPTG--IGILYVK---EA 241 (406)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCC--CHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---HH
T ss_pred CCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCCC--cccccCCCEEEEEchhccCCCC--cEEEEEe---HH
Confidence 99999999999 999999999999999999999 432211 1112245688999999998777 7999998 78
Q ss_pred HHHHHHHhhcc---------------------CCCCcchHHHHHHH-HHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 251 FATQLLKVQDN---------------------IPICASIISQHLAL-YSLQTGP-EWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 251 ~~~~l~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
+++.+...... +..+.+.+.+.++. ++++... .++++..++++++++++.+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 321 (406)
T 1kmj_A 242 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP 321 (406)
T ss_dssp HHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88776543311 11223444444433 5554322 2456778888899999999999886
Q ss_pred CCccccC--CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHHH
Q 015890 308 EGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAADR 376 (398)
Q Consensus 308 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~~ 376 (398)
++.+..+ . +.++++.++. .+..++...| .++||.+++|..| +.++++||+++. .+++++++++++
T Consensus 322 ~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~ 397 (406)
T 1kmj_A 322 DLTLYGPQNR-LGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTG 397 (406)
T ss_dssp TEEEESCTTC-CSEEEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHH
T ss_pred CeEEecCCCc-CCEEEEEECC--CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHH
Confidence 5566666 5 4445556652 2566777655 5889999998754 336899999998 689999999999
Q ss_pred HHHHHHHH
Q 015890 377 LRRGLEEL 384 (398)
Q Consensus 377 l~~~~~~~ 384 (398)
|+++++.+
T Consensus 398 l~~~~~~l 405 (406)
T 1kmj_A 398 LQRIHRLL 405 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99988754
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=6.4e-36 Score=279.85 Aligned_cols=332 Identities=18% Similarity=0.157 Sum_probs=244.4
Q ss_pred EEcCCccCCCCCcHHHHHHHHHhhcCCC-C----C--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 33 VSLAQGVVYWQPPKMAMEKVKELVWDPS-I----S--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~----~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
+.|+.+.+. ++|+++++++.+.+.+.. . + .|....+..++++.+++++ ++++++|++++|+++++..+
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~~~~ 77 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----GVSPSEIFFTSCATESINWI 77 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----TSCGGGEEEESCHHHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEECCHHHHHHHH
Confidence 456665555 678999999999886521 0 0 0111233456666666666 67778999999999999999
Q ss_pred HHHhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890 106 VLTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (398)
Q Consensus 106 ~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG 178 (398)
+.++. ++||+|+++.|+|+++...+ +..|.+++.+ +.+++ +.+|++.|++.++++ +++|++++|+||||
T Consensus 78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~--~~~v~~~~~~nptG 153 (384)
T 1eg5_A 78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSR-GVVKLEELEKLVDED--TFLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTT-SCBCHHHHHHHCCTT--EEEEEEESBCTTTC
T ss_pred HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEE-ccCCC-CccCHHHHHHHhCCC--CeEEEEECCCCCcc
Confidence 99998 79999999999998876655 7789999998 77654 578999999999865 59999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcC--CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--HH
Q 015890 179 TYIPERLLKRISDLCKAAG--SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--AT 253 (398)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~--~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--~~ 253 (398)
.+++ +++|.++|+++| +++|+||+| ++.... .....+.+++++|+||.+|++| +||+++++ ++ ..
T Consensus 154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~---~~~~~~ 223 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTIGKIPF--SLEKLEVDYASFSAHKFHGPKG--VGITYIRK---GVPIRP 223 (384)
T ss_dssp BBCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSCC--CCTTTCCSEEEEEGGGGTSCTT--CEEEEECT---TSCCCC
T ss_pred cccC---HHHHHHHHHhcCCceEEEEEhhhhcCCccc--CchhcCCCEEEecHHHhcCCCc--eEEEEEcC---CCcccc
Confidence 9999 899999999999 999999999 543221 1122245688999999998778 79999984 32 11
Q ss_pred HHHHh---hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCC
Q 015890 254 QLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEK 327 (398)
Q Consensus 254 ~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~ 327 (398)
.+... .....++.+.+.+.++..+++...+++++..+++.++++.+.+.|++.+ +.+..+. .+.++++.++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~- 301 (384)
T 1eg5_A 224 LIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFPN- 301 (384)
T ss_dssp SBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECTT-
T ss_pred ccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeCC-
Confidence 11110 1123457788888888888875335577888889999999999998744 3554432 13456666653
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+..++.+.| .++||.+.+|..|+. .+++||+++. .+++++++++++|+++++++.+.
T Consensus 302 -~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 379 (384)
T 1eg5_A 302 -IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDLT 379 (384)
T ss_dssp -CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred -CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2577788877 589999999876642 3689999996 68999999999999999887543
No 88
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.8e-35 Score=276.98 Aligned_cols=332 Identities=14% Similarity=0.095 Sum_probs=248.6
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC----CCC--CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS----ISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~----~~~--y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|++++||+.|.+ ++..+|++.+++.+.+.+.. ... |+......++++.+++++ +.+ +.+++ ++|++
T Consensus 41 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~~~-~~i~~-~sGt~ 114 (399)
T 3tqx_A 41 GEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL----GTD-DTILY-SSCFD 114 (399)
T ss_dssp TTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH----TCS-EEEEE-SCHHH
T ss_pred CCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH----CCC-cEEEE-CchHH
Confidence 3567999999954 22468999999888775411 111 112223456666666665 543 44555 45578
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNP 176 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~np 176 (398)
++..++.+++++||.|+++.|+|..+...++..|.+++.+ +. .|++.+++.++.. .++++|++++|+||
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~np 187 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRY-KN------NAMGDLEAKLKEADEKGARFKLIATDGVFSM 187 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEE-CT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETT
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEe-CC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCC
Confidence 9999999999999999999999999999999999999988 54 3677888888741 13699999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccc---cCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
||.+++ +++|.++|+++|+++|+||+| ..+.+.. .... ..+.+++++|+||+++ |++.||++++ +
T Consensus 188 tG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~---~ 259 (399)
T 3tqx_A 188 DGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH---K 259 (399)
T ss_dssp TTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC---H
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC---H
Confidence 999999 999999999999999999999 5543221 1111 1245689999999997 4455999999 7
Q ss_pred HHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 250 GFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 250 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
++++.+..... ..+.+.+...++++..+++....+.++..+++.++++++.+.|++++. .+..+. ++++|+.++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~ 337 (399)
T 3tqx_A 260 EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGF-QLVPGN-HPIIPVMLGDA 337 (399)
T ss_dssp HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSEEEEEEECH
T ss_pred HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH
Confidence 88888876432 224467777888888888752255688888999999999999988765 555555 67788887642
Q ss_pred CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+..++..+|+ ++||.+.++..+. ..+++|++++. .+++++++++++|.++++++
T Consensus 338 -~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 338 -QLATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -HHHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 24567888776 6899999876542 34689999985 78999999999999998875
No 89
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1e-34 Score=272.49 Aligned_cols=335 Identities=16% Similarity=0.107 Sum_probs=245.4
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 110 (398)
+.+.|+.+. +.++|+.+++++.+.+.+. ..+.......++++.++++ ++.+++++++|+|+++++..++.+++
T Consensus 8 ~~~yl~~~~-~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~----~g~~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 8 DPVITLTAG-PVNAYPEVLRGLGRTVLYD--YDPAFQLLYEKVVDKAQKA----MRLSNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp CCSEECSSS-CCCCCHHHHHHTTSCCCCT--TSHHHHHHHHHHHHHHHHH----TTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred CcceeecCC-CcCCCHHHHHHHhcccccc--ccHHHHHHHHHHHHHHHHH----hCCCCCEEEEeCCchHHHHHHHHHhc
Confidence 334455443 4467899999988776431 1111112234455555554 47777899999999999999999999
Q ss_pred cCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++||+|+++.|+|+++ ...++..|.+++.+ +.++++ .+|++.|++.++..+++++|++++|+||||.+++ +++
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEI-EVPYNE-AIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEE-ECCTTS-CCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred CCCCEEEEecCCcccHHHHHHHHHcCCceEEe-eCCCCC-CCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence 9999999999999775 34456679999998 777654 6899999999963223599999999999999999 889
Q ss_pred HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015890 189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQ------- 259 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~------- 259 (398)
|.++|+++|+++|+|++| ++..... ....+.+++++|+||+++ ++| +||++++ +++++.+....
T Consensus 156 i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~---~~~~~~l~~~~~g~~~~~ 228 (392)
T 2z9v_A 156 IGALVSAHGAYLIVDAVSSFGGMKTH--PEDCKADIYVTGPNKCLGAPPG--LTMMGVS---ERAWAKMKANPLAPRASM 228 (392)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBSCC--GGGGTCSEEEECSSSTTCCCSC--CEEEEEC---HHHHHHHHTCTTSCCSST
T ss_pred HHHHHHHcCCeEEEEcccccCCcccc--cccccceEEEecCcccccCCCc--eeEEEEC---HHHHHHhhhccCCCCcee
Confidence 999999999999999999 5432211 112235588999999664 344 5999998 78887775421
Q ss_pred -------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEE
Q 015890 260 -------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW 321 (398)
Q Consensus 260 -------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~ 321 (398)
....++.+...+.++..+++....+ +++..+++.++++++.+.|++++ +.+..+. .+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~ 307 (392)
T 2z9v_A 229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTA 307 (392)
T ss_dssp TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEE
T ss_pred ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEE
Confidence 1123455666666666677642333 67778888888999999888774 3555422 367788
Q ss_pred eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c-CCCHHHHHHHHHHHHHHHHHHhc
Q 015890 322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-G-GLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.++.. .+..++.++|.+++||.+.+|..+..++++|+++ + ..+++++++++++|+++++++.-
T Consensus 308 ~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~ 373 (392)
T 2z9v_A 308 VRTPDG-VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGR 373 (392)
T ss_dssp EECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred EECCCC-CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCC
Confidence 888643 3677888888744599999998766788999994 5 46899999999999999987653
No 90
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=8.2e-35 Score=273.28 Aligned_cols=337 Identities=10% Similarity=0.067 Sum_probs=250.3
Q ss_pred HHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChH
Q 015890 23 QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKS-SVMVTAGAN 99 (398)
Q Consensus 23 ~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t 99 (398)
++...+++ .+.++.| +.++|+.+++++.+.+.. .|.+ .....++++.++++ ++.+++ +|++++|++
T Consensus 12 ~~~~~~~~-~~~~~~g--~~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~----~g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 12 REPLVTPN-KLLMGPG--PSNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYL----FQTNNIATFCLSASGH 80 (393)
T ss_dssp GSCCCCCC-CEECSSS--CCCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHH----HTCCCSEEEEESSCHH
T ss_pred hcccCCCC-eEEecCC--CCCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH----hCCCCCcEEEEcCcHH
Confidence 44444443 4555555 566789999998876543 2321 22334455555554 477665 899999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP 176 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~np 176 (398)
+++..++.+++++||+|+++.|+|+++ ...++..|.+++.+ +.+++ +.+|++.|++.+++ ++ ++|++++|+||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~np 156 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVV-KSKVG-QSLSLDEIRDALLIHKP--SVLFLTQGDSS 156 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEE-eCCCC-CCCCHHHHHHHHhccCC--cEEEEEccCCC
Confidence 999999999999999999999999874 34456689999999 77654 46899999999986 54 99999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
||.+++ +++|.++|+++|+++|+|+++ ++.... .....+.++++.|+||++ |++|+ ||++++ +++++.
T Consensus 157 tG~~~~---l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~---~~~~~~ 226 (393)
T 2huf_A 157 TGVLQG---LEGVGALCHQHNCLLIVDTVASLGGAPM--FMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS---HRAVER 226 (393)
T ss_dssp TTEECC---CTTHHHHHHHTTCEEEEECTTTBTTBCC--CTTTTTCSEEECCSSSTTCCCSSC--EEEEEC---HHHHHH
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEcccccCCCCc--chhhcCccEEEECCCcccccCCCe--EEEEEC---HHHHHH
Confidence 999999 899999999999999999999 543221 122234668899999975 55665 999998 788888
Q ss_pred HHHhh----c-------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 255 LLKVQ----D-------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 255 l~~~~----~-------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
+.... . ....+.+...+.++.++++...+ .+++..++++++++++.+.|++++. .
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~ 305 (393)
T 2huf_A 227 YKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGF-E 305 (393)
T ss_dssp HHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred HhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC-e
Confidence 76541 0 01134566777776667764222 3677788888899999999988743 5
Q ss_pred cccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 311 VKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 311 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+..+. .+.++++.++.. .+..++.++|++++||.+.+|..+..++++||++ +. .+++++++++++|.++++++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 306 LYADPKDRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp BSSCGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred eccCccccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 55543 245777887632 3677888888756799999998776788999999 53 468899999999999998875
Q ss_pred c
Q 015890 386 K 386 (398)
Q Consensus 386 ~ 386 (398)
.
T Consensus 385 ~ 385 (393)
T 2huf_A 385 P 385 (393)
T ss_dssp C
T ss_pred C
Confidence 4
No 91
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.6e-34 Score=269.96 Aligned_cols=320 Identities=13% Similarity=0.049 Sum_probs=244.5
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-------
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA------- 112 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~------- 112 (398)
...+++|++.+++.+.+... ...+....+..++++.+++++.+.++.++++|++++|+++++..++.++..+
T Consensus 38 ~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 38 MCSNVLPITRKIVDIFLETN-LGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp SCCCCCTHHHHHHHHHTTCC-TTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCcHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 34456789999999988653 2222222355778888889888888998999999999999999999999765
Q ss_pred ------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHH
Q 015890 113 ------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERL 185 (398)
Q Consensus 113 ------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~ 185 (398)
||+|+++.|+|+++...++..|++++.+ +.+++ +.+|+++|++.+++ ++ ++|++++|+||||.+.+
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~--- 189 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYA-PIKED-YTIDEKFVKDAVEDYDV--DGIIGIAGTTELGTIDN--- 189 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEE-CBCTT-SSBCHHHHHHHHHHSCC--CEEEEEBSCTTTCCBCC---
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEE-eeCCC-CcCCHHHHHHHHhhcCC--eEEEEECCCCCCCCCCC---
Confidence 8999999999999999999999999999 87654 57899999999987 54 89999999999999998
Q ss_pred HHHHHHHHHHcCCEEEEeece--e--ccCCC---------ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 186 LKRISDLCKAAGSWLVVDNTY--F--MYDGR---------KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~--~--~~~~~---------~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+++|.++|+++|+++|+||+| + .+.+. +..... +.++++.|++|+++ +|.++|++++++ +.+.
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~--~~~~ 265 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKD--IGYK 265 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESS--GGGG
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeC--HHHH
Confidence 899999999999999999999 2 22221 111122 45688999999885 677999988875 4444
Q ss_pred HHHHHhhccC-----------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEE
Q 015890 253 TQLLKVQDNI-----------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 321 (398)
Q Consensus 253 ~~l~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 321 (398)
+.+....... ..+.+...+.++...+. ...+++..++..++++++.+.|++++. .+..+..+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~ 342 (397)
T 3f9t_A 266 RYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG--REGQRKIVNECMENTLYLYKKLKENNF-KPVIEPILNIVA 342 (397)
T ss_dssp GGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEEE
T ss_pred HhhccCCccccCCCccccccccccchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEcCCCccEEE
Confidence 4332211111 11224555555555553 355678888888999999999988854 544444477788
Q ss_pred eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
+.++. ..++.+.|. ++||.+.++. .++++|++++. .+++++++++++|.++++
T Consensus 343 ~~~~~----~~~~~~~l~-~~gi~v~~~~---~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 343 IEDED----YKEVCKKLR-DRGIYVSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EECTT----HHHHHHHHH-HTTCBCEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEeCC----HHHHHHHHH-hCCeEEeccC---CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 88763 567777775 7799999976 36899999996 689999999999988764
No 92
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=6.1e-35 Score=270.01 Aligned_cols=321 Identities=14% Similarity=0.046 Sum_probs=240.3
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
.+.++||.+++++.+.+... ..+.......++++.+++++ +.+++++++++|+++++..++.++.++||+|+++
T Consensus 8 ~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 8 GPVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAF----RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp SSCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHH----TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHh----CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 45667899999998876431 11111123455666666655 7777899999999999999999999999999999
Q ss_pred CCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-
Q 015890 120 APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA- 196 (398)
Q Consensus 120 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~- 196 (398)
.|+|+++. ..++..|.+++.+ +.+++ +.+|++++++ ++ +++|++++|+||||.+++ +++|.++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~---~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 151 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERL-DYPYG-DTPRPEDVAK---EG--YAGLLLVHSETSTGALAD---LPALARAFKEKN 151 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCTTTSCC---SS--CSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred eCCchhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHhc---cC--CcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence 99998864 4556689999999 77654 4678888877 33 589999999999999999 88999999999
Q ss_pred -CCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH---------HH----Hh-hc
Q 015890 197 -GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ---------LL----KV-QD 260 (398)
Q Consensus 197 -~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~---------l~----~~-~~ 260 (398)
|+++|+|++| ++..... ....+.+++++|+||+++ ++.++||++++ +++++. +. .. ..
T Consensus 152 ~~~~li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T 1iug_A 152 PEGLVGADMVTSLLVGEVA--LEAMGVDAAASGSQKGLM-CPPGLGFVALS---PRALERLKPRGYYLDLARELKAQKEG 225 (352)
T ss_dssp TTCEEEEECTTTBTTBCCC--SGGGTCSEEEEESSSTTC-CCSCEEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred CCCEEEEECCccccCccee--ccccCeeEEEecCccccc-CCCceeEEEEC---HHHHHHhhCCCceeeHHHHHhhcccC
Confidence 9999999999 5432211 112235588999999553 22347999988 665543 21 11 12
Q ss_pred cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHH
Q 015890 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLA 339 (398)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll 339 (398)
...++.+.+.+.++.++++....++++..++++++++++.+.|++++ ..+..+. .++++++.++.. .+..++.++|.
T Consensus 226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 303 (352)
T 1iug_A 226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEG-VPYARVKEAFA 303 (352)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTT-CCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccccccCCeEEEEEcCCC-CCHHHHHHHHH
Confidence 23456777788777777765333377888889999999999998874 4666553 577888888743 36778888876
Q ss_pred HhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 340 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 340 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
++||.+.+|..+..++++|++++. .+++++++++++|+++++++.
T Consensus 304 -~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 304 -QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp -TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred -HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 779999998855557899999997 579999999999999988763
No 93
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=7.3e-35 Score=273.92 Aligned_cols=330 Identities=14% Similarity=0.127 Sum_probs=249.8
Q ss_pred cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhcc
Q 015890 35 LAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD 111 (398)
Q Consensus 35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~ 111 (398)
+..+.++.++++.+.+++.+.+.. .|.+. ....++++.+++++ +.+++ +|++++|+++++..++.++++
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~ 91 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF----QTENRATMCVSGSAHAGMEAMLSNLLE 91 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH----TCCCSCEEEESSCHHHHHHHHHHHHCC
T ss_pred eeecCCCCCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh----CCCCCcEEEECCcHHHHHHHHHHHhcC
Confidence 344555677889999988765532 24221 22456666666666 67777 899999999999999999999
Q ss_pred CCCEEEEeCCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+||+|+++.|+|+++. ..++..|++++.+ +.+. ++.+|++.+++.+++ + +++|++++|+||||.+++ +++
T Consensus 92 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~--~~~v~~~~~~nptG~~~~---~~~ 164 (396)
T 2ch1_A 92 EGDRVLIAVNGIWAERAVEMSERYGADVRTI-EGPP-DRPFSLETLARAIELHQ--PKCLFLTHGDSSSGLLQP---LEG 164 (396)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTT
T ss_pred CCCeEEEEcCCcccHHHHHHHHHcCCceEEe-cCCC-CCCCCHHHHHHHHHhCC--CCEEEEECCCCCCceecC---HHH
Confidence 9999999999998874 4678899999999 7765 457899999999986 5 499999999999999999 899
Q ss_pred HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh--------
Q 015890 189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------- 259 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------- 259 (398)
|.++|+++|+++|+||+| ++... ......+.++++.|++|.++ ++.++|+++++ +++++.+....
T Consensus 165 i~~l~~~~~~~li~Dea~~~g~~~--~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~ 238 (396)
T 2ch1_A 165 VGQICHQHDCLLIVDAVASLCGVP--FYMDKWEIDAVYTGAQKVLG-APPGITPISIS---PKALDVIRNRRTKSKVFYW 238 (396)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBC--CCTTTTTCCEEECCCC-CCC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCGGG
T ss_pred HHHHHHHcCCEEEEEccccccCCc--cchhhcCcCEEEEcCCcccc-CCCCeEEEEEC---HHHHHhhhhccCcccceEe
Confidence 999999999999999999 54322 12222233577789999875 33456999998 67777664310
Q ss_pred ---------------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEE
Q 015890 260 ---------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIY 319 (398)
Q Consensus 260 ---------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~ 319 (398)
....++.+...+.++.++++.. ..++++..++++++++++.+.|++++. .+..+.+ +.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~ 317 (396)
T 2ch1_A 239 DLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGL-DIFVKDPRHRLPTV 317 (396)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC-CBSSCSGGGBCTTE
T ss_pred chHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCC-eeccCCccccCCce
Confidence 1123456778888888888752 234677888888999999999987743 6665543 247
Q ss_pred EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+++.++.+ .+..++.++|++++||.+++|..+..++++||++ +. .+++++++++++|+++++++...
T Consensus 318 ~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 386 (396)
T 2ch1_A 318 TGIMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPD 386 (396)
T ss_dssp EEEECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEcCCC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCcc
Confidence 78888643 3677888888755699999988766788999999 43 57899999999999999887644
No 94
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=2.8e-34 Score=268.63 Aligned_cols=326 Identities=17% Similarity=0.085 Sum_probs=247.0
Q ss_pred cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEE
Q 015890 39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSV 116 (398)
Q Consensus 39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~V 116 (398)
..+.+++|++++++.+.+... + .....+..+.+.+.+.+.++.++ +++++++|+++++. ++.+++++||+|
T Consensus 8 ~gp~~~~~~v~~a~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~v 80 (384)
T 3zrp_A 8 VGPTTIKEDVLVAGLENNVGF----T--SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKI 80 (384)
T ss_dssp SSCSCCCHHHHHHTTCCSCCT----T--SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEE
T ss_pred CCCCCCCHHHHHHhhcccccc----c--cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEE
Confidence 345667899999887765321 1 22224455555555555567776 88999999999999 999999999999
Q ss_pred EEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890 117 VMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (398)
Q Consensus 117 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~ 194 (398)
+++.++|++ +...++..|.+++.+ +.+.+ +.+|++++++.+++.. +++|++++|+||||.+++ +++|.++|+
T Consensus 81 i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~-~~~v~~~~~~nptG~~~~---l~~i~~l~~ 154 (384)
T 3zrp_A 81 LVVSNGVFGDRWEQIFKRYPVNVKVL-RPSPG-DYVKPGEVEEEVRKSE-YKLVALTHVETSTGVREP---VKDVINKIR 154 (384)
T ss_dssp EEECSSHHHHHHHHHHTTSSCEEEEE-CCSTT-CCCCHHHHHHHHHHSC-EEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred EEecCCcchHHHHHHHHHcCCcEEEe-cCCCC-CCCCHHHHHHHHHhCC-CcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence 999999966 556668889999999 87764 4689999999998733 599999999999999999 899999999
Q ss_pred HcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH-------------HHhh-
Q 015890 195 AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-------------LKVQ- 259 (398)
Q Consensus 195 ~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l-------------~~~~- 259 (398)
++|+++|+|++| ++.... .....+.+++++|+||+++ ++.++|+++++ +++++.+ ....
T Consensus 155 ~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAEEV--KAEEWNVDVYLTASQKALG-SAAGLGLLLLS---PKALSILDSQNSIAGYYLDLRNWLP 228 (384)
T ss_dssp GGEEEEEEECTTTTTTSCC--CTTTTTCSEEEEETTSTTC-CCSSEEEEEEC---HHHHHHHHHCCCSCCSTTCHHHHHH
T ss_pred hcCCEEEEECcccccCccc--cccccCCCEEEecCccccc-CCCceEEEEEC---HHHHHHhcCCCCCCcccccHHHHHH
Confidence 999999999999 443221 1222345688999999885 33458999998 6776666 2211
Q ss_pred --------ccCCC-CcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCC
Q 015890 260 --------DNIPI-CASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLP 325 (398)
Q Consensus 260 --------~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~ 325 (398)
....+ +.+...+.++..+++..... +++..++++++++++.+.|++++ +.+..+. .++++++.++
T Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~ 307 (384)
T 3zrp_A 229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILK 307 (384)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECS
T ss_pred HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECC
Confidence 11222 56777777776777642223 67888888999999999998884 3565554 4677788887
Q ss_pred CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccc
Q 015890 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
. .+..++.+.|. ++||.+++|..+.. +++|++++. .+++++++++++|+++++++....
T Consensus 308 ~--~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~~ 367 (384)
T 3zrp_A 308 V--ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEPI 367 (384)
T ss_dssp S--SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred C--CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 5 36788888876 67999999875433 899999886 789999999999999999876543
No 95
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=4e-34 Score=270.16 Aligned_cols=327 Identities=10% Similarity=0.039 Sum_probs=251.3
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc-EEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~-v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
.+.++++++++++.+.+. ..| .....++.+.+.+++.+.++.+.++ +++++|+++++..++.+++++||+|++
T Consensus 20 gp~~~~~~v~~a~~~~~~----~~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~ 93 (411)
T 3nnk_A 20 GPINADPRVLRAMSSQLI----GQY--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLV 93 (411)
T ss_dssp SCCCCCHHHHHHHTSCCC----CTT--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCCHHHHHHhhcccc----ccc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEE
Confidence 466778999998876542 122 2223455566666666666777665 788899999999999999999999999
Q ss_pred eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
+.|+|++ +...++..|++++.+ +.+.+ +.+|+++|++.+++ + +++|++++|+||||.+.+ +++|.++|++
T Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 166 (411)
T 3nnk_A 94 PVFGRFGHLLCEIARRCRAEVHTI-EVPWG-EVFTPDQVEDAVKRIR--PRLLLTVQGDTSTTMLQP---LAELGEICRR 166 (411)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred ecCCchHHHHHHHHHHcCCeEEEE-ecCCC-CCCCHHHHHHHHhhCC--CeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence 9999987 888889999999999 77544 57899999999985 4 499999999999999999 8899999999
Q ss_pred cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890 196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------------- 259 (398)
Q Consensus 196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~--------------- 259 (398)
+|+++|+|+++ +.... ......+.++++.|++|+++ ++.++|+++++ +++++.+....
T Consensus 167 ~~~~li~Dea~~~~~~~--~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~gg~ 240 (411)
T 3nnk_A 167 YDALFYTDATASLGGNP--LETDVWGLDAVSAGMQKCLG-GPSGTSPITLS---ARMEEAIRRRKCVEEGIRTDAHRDGD 240 (411)
T ss_dssp HTCEEEEECTTTBTTBC--CCTTTTTCSEEECCSTTTTC-CCSSEEEEEEC---HHHHHHHHTTCCCCGGGCCTTCCCCS
T ss_pred cCCEEEEECCcccCCcc--cchhccCCcEEEecCccccC-CCCceEEEEEC---HHHHHHHhhccccccccccccccccc
Confidence 99999999998 43221 12222345688999999854 34468999999 78888776543
Q ss_pred ---------------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCCc-
Q 015890 260 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG- 316 (398)
Q Consensus 260 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~- 316 (398)
.....+.+...+.++..+++....+ +++..+++.++++++.+.|++.+. .+..+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~ 319 (411)
T 3nnk_A 241 EEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGL-ETFGDLKH 319 (411)
T ss_dssp SCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGGG
T ss_pred CCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeCCCccc
Confidence 1123456777777777777653333 678888899999999999988754 5554432
Q ss_pred --cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 317 --AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 317 --~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
++++++.+++. .+..++..+|++++||.+++|.....++++||++ +. .+++++++++++|+++++++...
T Consensus 320 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 393 (411)
T 3nnk_A 320 KMNNVLGVVIPQG-INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP 393 (411)
T ss_dssp BCSSEEEEECCTT-CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccEEEEECCCC-CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 57788888653 3677888888766699999986555678999998 65 57899999999999999886543
No 96
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.3e-34 Score=271.15 Aligned_cols=327 Identities=13% Similarity=0.083 Sum_probs=247.6
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcC-CC---CCCC--CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-PS---ISKY--GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|+.++||+.|.+ ++.++|.+.+++.+.+.+ .. ...| +...+..++++.+++++ +++ +.++++++++
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~ 110 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GYS--RALLFISGFA 110 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC--cEEEeCCcHH
Confidence 5678999999875 545789999999888754 11 1123 33455677788888776 553 4455555589
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCcc
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGT 179 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~ 179 (398)
++..++.+++++||.|+++.|+|..+...++..|.+++.+ +. .|+++|++.++..+ .+++|++++|+||||.
T Consensus 111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~ 183 (384)
T 1bs0_A 111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-AH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGD 183 (384)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-CT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCC
T ss_pred HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEe-CC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCC
Confidence 9999999999999999999999999999999999999988 53 37899999987542 2488889999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-ecc-C--CCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMY-D--GRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~-~--~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
+++ +++|.++|+++|+++|+||+| ... . +.... ....+.+++++|+||.++++| ||++++ +++++.
T Consensus 184 ~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~ 254 (384)
T 1bs0_A 184 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADY 254 (384)
T ss_dssp BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHH
T ss_pred ccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC---cEEEeC---HHHHHH
Confidence 999 899999999999999999999 332 2 22211 111223488999999998766 999998 788888
Q ss_pred HHHhhc--cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890 255 LLKVQD--NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 255 l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
+..... ..+.+.+.+.++++.++++...+ +.++..++++++++++.+.|++++. .+.. ..++++|+.++.. .+.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~~-~~~ 331 (384)
T 1bs0_A 255 LLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLAD-SCSAIQPLIVGDN-SRA 331 (384)
T ss_dssp HHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECS-CCSSBCCEEEESH-HHH
T ss_pred HHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCC-cccC-CCCCEEEEEeCCH-HHH
Confidence 765421 12335788888888888875222 6678888899999999999998864 5554 3467777777532 245
Q ss_pred HHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
.++.++|. ++||.+.++..++. .+++|++++. .+++++++++++|+++
T Consensus 332 ~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 332 LQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 67788776 67999999887642 3789999997 5899999999998764
No 97
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.6e-34 Score=274.22 Aligned_cols=341 Identities=16% Similarity=0.092 Sum_probs=248.4
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcC-C-CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-P-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|++++||+.|.+ ++..+|.+.+++.+.+.. . ....|....|..+..+.+++.+.++++.+ +.+++++|++++..
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 139 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG 139 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence 4567899999974 435789999999888754 2 12223333444333344444444434553 56666777789999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~nptG~~~~ 182 (398)
++.+++++||.|+++.|+|.++...++..|.+++.+ +. .|++.|++.++... .+++|++++++||||.+.+
T Consensus 140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF-RH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEe-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 999999999999999999999999999999999888 42 48999999997521 3699999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccC--CCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYD--GRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~--~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
+++|.++|+++|+++|+||+| +.+. +.... ....+.+++++|+||++|++| ||++++ +++++.+
T Consensus 213 ---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~---~~l~~~l 283 (427)
T 2w8t_A 213 ---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSN---HPKFEAV 283 (427)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEEC---CTTGGGG
T ss_pred ---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeC---HHHHHHH
Confidence 999999999999999999999 3332 22211 112345789999999998766 999998 5666655
Q ss_pred HHhh--ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCCChH
Q 015890 256 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 256 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 332 (398)
.... ...+.+.++..++++.++++.. ...++..++++++++++.+.|++.+. .+. .+..++++++.++.. .+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~aa~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~ 360 (427)
T 2w8t_A 284 RLACRPYIFTASLPPSVVATATTSIRKL-MTAHEKRERLWSNARALHGGLKAMGF-RLGTETCDSAIVAVMLEDQ-EQAA 360 (427)
T ss_dssp GGTCHHHHSSCCCCHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHHHHHHTC-EESCSSCCSSEEEEEESSH-HHHH
T ss_pred HHhcccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCCCEEEEEECCH-HHHH
Confidence 4431 1234566777777777777652 12466778888888899888887754 555 341467888888632 2356
Q ss_pred HHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccccc
Q 015890 333 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV 390 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~ 390 (398)
++..+|+ ++||.+.++..|.. .+++|++++. .+++++++++++|.++++++.+....
T Consensus 361 ~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 421 (427)
T 2w8t_A 361 MMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIGLE 421 (427)
T ss_dssp HHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC---
T ss_pred HHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCccccc
Confidence 7778776 67999999887653 3689999997 79999999999999999987765443
No 98
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.9e-34 Score=273.54 Aligned_cols=341 Identities=15% Similarity=0.104 Sum_probs=250.4
Q ss_pred HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
.++++.+.|+.+.+. ++||++++++.+.+.......++. ..+..+..+.+.+.+.+.++.++++|++++|+++
T Consensus 18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~ 96 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATE 96 (423)
T ss_dssp --CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHH
T ss_pred cccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHH
Confidence 356788888877665 679999999998876111111111 1122344455666666666888889999999999
Q ss_pred HHHHHHHHhcc----CCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 101 AFVNIVLTLCD----AGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 101 a~~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
|++.++.++.+ +||+|+++.++|+++...+ +..|++++.+ +.++ ++.+|++.|++.+++++ ++|++++|
T Consensus 97 a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~v~~~~~ 172 (423)
T 3lvm_A 97 SDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQR-NGIIDLKELEAAMRDDT--ILVSIMHV 172 (423)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCT-TSCCCHHHHHHHCCTTE--EEEECCSB
T ss_pred HHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEe-ccCC-CCccCHHHHHHhcCCCc--EEEEEeCC
Confidence 99999998874 7999999999999887766 4559999999 8776 45789999999998754 99999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+||||.+++ +++|.++|+++|+++|+||+| ++... ......+.+++++|+||.+|++| +|++++++ +..
T Consensus 173 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~--~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~~ 242 (423)
T 3lvm_A 173 NNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP--IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR---KPR 242 (423)
T ss_dssp CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC--CCTTTSCCSEEEEESTTTTSCSS--CEEEEECB---TTB
T ss_pred CCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC--cChhhcCCCEEEechHHhcCCCC--eEEEEEec---ccc
Confidence 999999999 899999999999999999999 43221 12222345688999999887665 89998883 333
Q ss_pred HHHHHhhc-------cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEe
Q 015890 253 TQLLKVQD-------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWA 322 (398)
Q Consensus 253 ~~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~ 322 (398)
+.+..... ....+.+...+.++..+++....++++..++++++++++.+.|++++++.+..+.+ +.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 322 (423)
T 3lvm_A 243 VRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNV 322 (423)
T ss_dssp CCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEE
T ss_pred CCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE
Confidence 33332211 22345677777777777765334578888899999999999999886656665442 244555
Q ss_pred eCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
.++. .+..++...|. + |.+.+|..|.. .+++|++++. .+++++++++++|+++++
T Consensus 323 ~~~~--~~~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~ 397 (423)
T 3lvm_A 323 SFNY--VEGESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIG 397 (423)
T ss_dssp EETT--SCHHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EeCC--CCHHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5542 35677777664 4 99999877643 4789999997 788999999999999998
Q ss_pred HHhcc
Q 015890 383 ELVKD 387 (398)
Q Consensus 383 ~~~~~ 387 (398)
++.+.
T Consensus 398 ~~~~~ 402 (423)
T 3lvm_A 398 RLRDL 402 (423)
T ss_dssp HHHTS
T ss_pred Hhhcc
Confidence 87653
No 99
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.2e-34 Score=270.95 Aligned_cols=324 Identities=18% Similarity=0.141 Sum_probs=240.1
Q ss_pred CCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc----cCCCE
Q 015890 43 QPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS 115 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~----~~gd~ 115 (398)
++|+.+++++.+.+.+.. ...|....+..+..+.+.+.+.++++.+++++++++|+++++..++.++. ++||+
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~ 90 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH 90 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCE
Confidence 578999999999876421 11132222223344555555555557777899999999999999999998 89999
Q ss_pred EEEeCCCCcChhhHHH---hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 116 VVMFAPYYFNSYMSFQ---MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 116 Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
|+++.|+|+++...++ ..|++++.+ +.+++ +.+|++.|++.++++ +++|++++|+||||.+++ +++|.++
T Consensus 91 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---l~~i~~l 163 (382)
T 4eb5_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDD--TILVSVQHANNEIGTIQP---VEEISEV 163 (382)
T ss_dssp EEEETTCCHHHHHHHHHHTTTTCEEEEE-CBCTT-SCBCHHHHHHHCCTT--EEEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred EEECCCcchHHHHHHHHHHhCCcEEEEe-ccCCC-CccCHHHHHHHhcCC--CeEEEEeccCCCccccCC---HHHHHHH
Confidence 9999999988776654 369999999 87654 568999999999865 489999999999999999 8899999
Q ss_pred HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-------hccCCC
Q 015890 193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------QDNIPI 264 (398)
Q Consensus 193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~ 264 (398)
|+++|++ |+|++| ++.... .....+.+++++|+||.+|++| +|++++++ +. .+... ......
T Consensus 164 ~~~~~~~-i~D~a~~~g~~~~--~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~--~l~~~~~~~~~~~~~~~~ 233 (382)
T 4eb5_A 164 LAGKAAL-HIDATASVGQIEV--DVEKIGADMLTISSNDIYGPKG--VGALWIRK---EA--KLQPVILGGGQENGLRSG 233 (382)
T ss_dssp HTTSSEE-EEECTTTBTTBCC--CHHHHTCSEEEEETGGGTCCSS--CEEEEEET---TC--CCCCSSCSSCTGGGTSCS
T ss_pred HHHCCCE-EEEcchhcCCccc--CccccCCCEEEeehHHhcCCCc--eEEEEEcc---cc--ccCceecCCCccccccCC
Confidence 9999999 999999 543221 1111235688999999987656 68988884 21 11111 112234
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+.+...+.++..+++...+++++..+++.++++.+.+.|++++++.+..+.+ ++++++.++. .+..++.+.|. +
T Consensus 234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-~ 310 (382)
T 4eb5_A 234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD-M 310 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHH-H
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHH-H
Confidence 5566677766667664334567888888999999999999875555555431 4567777762 35778888775 7
Q ss_pred cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+||.+.+|..|.. ++++||+++. .+++++++++++|+++++++.+
T Consensus 311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999876432 4789999996 6899999999999999988765
No 100
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=6.3e-35 Score=274.05 Aligned_cols=325 Identities=13% Similarity=0.141 Sum_probs=240.6
Q ss_pred HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCC-CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSIS-KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~-~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.++||+.+.++.. .+|++.+++.+.+.+.... .+.+.....++++.+++++ + .+++++++|+++++
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~v~~~~~gt~a~ 106 (392)
T 3ruy_A 33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT----N--KEMVLPMNTGAEAV 106 (392)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc----C--CCEEEEeCcHHHHH
Confidence 35788999998765544 5899999999988653211 1112333445555555544 5 67999999999999
Q ss_pred HHHHHHhccC----------CCEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCCCCCCChHHHHHhh
Q 015890 103 VNIVLTLCDA----------GDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTL 159 (398)
Q Consensus 103 ~~~~~~l~~~----------gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~l 159 (398)
+.++..+..+ +|+|+++.|+|++....+...+.. +..+ +. .|+++|++++
T Consensus 107 ~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l 179 (392)
T 3ruy_A 107 ETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI-PY------GDLEALKAAI 179 (392)
T ss_dssp HHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE-CT------TCHHHHHHHC
T ss_pred HHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee-Cc------ccHHHHHHHh
Confidence 9999987643 679999999998877665444321 3333 21 2799999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 160 ETKPTPKLVSVVNPGNPSGTYIPERL-LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
+++ +++|++++|+||||.+++.++ +++|.++|++||+++|+||+| +.+.+........+....+.|+||.++ +|
T Consensus 180 ~~~--~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~-gG 256 (392)
T 3ruy_A 180 TPN--TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALG-GG 256 (392)
T ss_dssp CTT--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TT
T ss_pred ccC--eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhh-CC
Confidence 854 599999999999999996555 999999999999999999999 655554332221111112237789986 56
Q ss_pred -ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Ccccc
Q 015890 237 -WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKG 313 (398)
Q Consensus 237 -~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~ 313 (398)
+|+||++++ +++++.+.......+++.+.+.++++.++++.. .. ++..++++++++++.+.|++++. +....
T Consensus 257 ~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 331 (392)
T 3ruy_A 257 VFPISCAAAN---RDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-EE-EKLTERSLQLGEKLVGQLKEIDNPMITEVR 331 (392)
T ss_dssp TSCCEEEEEC---HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-HH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred hhhhEEEEEC---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-Hh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 999999998 788777766666667888999999999998752 22 56777888899999999988753 23334
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+. ++++++.++. +..++.+.|. ++||.+.++. ++++|++++. .+++++++++++|++++
T Consensus 332 ~~-g~~~~~~~~~---~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 332 GK-GLFIGIELNE---PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EE-TTEEEEEESS---CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ee-eeEEEEEEcc---hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 44 5566666764 5678888776 8999999874 7899999776 78999999999998875
No 101
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=1.6e-34 Score=274.49 Aligned_cols=348 Identities=11% Similarity=0.056 Sum_probs=236.6
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.+ .++++ .+|++.+++.+++.+. ..|....+..+.++++++++.+.++.+.++|++++|+++++.
T Consensus 26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~ 103 (430)
T 3i4j_A 26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATE 103 (430)
T ss_dssp TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence 367889999987 45665 3899999999988653 334444566778888888888888888889999999999999
Q ss_pred HHHHHhc--------cCCCEEEEeCCCCcChhhHHHhcCcEE---------------EEeccCCCC--CCCCChHHHHHh
Q 015890 104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVTH---------------ILVGPCSSK--TLHPDADWLEKT 158 (398)
Q Consensus 104 ~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~--~~~~d~e~l~~~ 158 (398)
.+++.++ .++++|++.+|+|+++...+...+... ..+ +.+.. ....|++.|++.
T Consensus 104 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~ 182 (430)
T 3i4j_A 104 SAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKL-PKPDPARNGAEDAEGLRAL 182 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEE-CCCCTTSCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEc-CCCcccchhhHHHHHHHHH
Confidence 9999886 346899999999998776554444321 111 11110 011255889998
Q ss_pred hcc---CCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC-CcEEEEccccc
Q 015890 159 LET---KPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-DHVVNLFSFSK 230 (398)
Q Consensus 159 l~~---~~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~-~~~i~~~s~sK 230 (398)
++. .+ +++|+++.++| ++|. .++.+++++|.++|++||+++|+||+| +.+.+........ +....+.++||
T Consensus 183 l~~~~~~~-~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK 261 (430)
T 3i4j_A 183 LEREGPET-VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGK 261 (430)
T ss_dssp HHHHCGGG-EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECG
T ss_pred HHhcCCCC-EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcc
Confidence 873 22 46666666677 8887 678888999999999999999999999 6555543322222 22222347899
Q ss_pred ccCCCc-ceeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890 231 AYGMMG-WRVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 231 ~~~~~G-~r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l 303 (398)
.++ +| +|+||++++ +++++.+... ....+++.++++++++.++|+.. ++..++..+.....++.+.+.+
T Consensus 262 ~l~-~G~~r~G~~~~~---~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (430)
T 3i4j_A 262 GLA-AGYAPLAGLLAA---PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQ 337 (430)
T ss_dssp GGT-TTSSCCEEEEEC---HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-CCccccEEEEEC---HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 998 69 999999998 8899888763 44567788999999999988741 2344455555555566666665
Q ss_pred ccCCCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCC--C-CCCeEEEEecC-CCHHHHH
Q 015890 304 SPLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG-LVEDDCK 371 (398)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~--~-~~~~iRi~~~~-~~~~~~~ 371 (398)
++++.+....+. ++++++.+.... ....++.+.++ ++||.++|+..+ + ..+++||+++. .++++++
T Consensus 338 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~ 415 (430)
T 3i4j_A 338 ARFPQMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVD 415 (430)
T ss_dssp HHCTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECCCTTCCHHHHH
T ss_pred HhCCCeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHH
Confidence 566655555565 667777764211 11356777776 889999998432 1 25789999885 6899999
Q ss_pred HHHHHHHHHHHHH
Q 015890 372 AAADRLRRGLEEL 384 (398)
Q Consensus 372 ~~~~~l~~~~~~~ 384 (398)
+++++|+++++++
T Consensus 416 ~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 416 GLLALLAGALEDV 428 (430)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 102
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-34 Score=267.99 Aligned_cols=331 Identities=16% Similarity=0.118 Sum_probs=246.6
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
+.++|+.| +..+||++.+++.+.+. +.|+. ..+..++++.+++++. ...+++++++++|+++++..++.+
T Consensus 4 ~~~~~~~g--p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g--~~~~~~~v~~~~g~t~a~~~~~~~ 75 (366)
T 1m32_A 4 NYLLLTPG--PLTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT--ASEGYTSVLLQGSGSYAVEAVLGS 75 (366)
T ss_dssp -CEECSSS--SCCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC--SSSSEEEEEEESCHHHHHHHHHHH
T ss_pred ccccccCC--CcCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC--CCCcCcEEEEecChHHHHHHHHHH
Confidence 36888888 45688999999877532 22211 1677889999998873 111235799999999999999999
Q ss_pred hccCCCEEEEeC-CCCcC-hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 109 LCDAGDSVVMFA-PYYFN-SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 109 l~~~gd~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
++++||+|+++. +.|.. +...++..|.+++.+ +.+.+ +.+|++.|++.+++++++++|++++++||||.+++ +
T Consensus 76 ~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l 150 (366)
T 1m32_A 76 ALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAY-DCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---I 150 (366)
T ss_dssp SCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEE-ECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---H
T ss_pred hcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEE-eCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---H
Confidence 999999998876 44443 556778889999988 77654 46899999999986533689999999999999999 8
Q ss_pred HHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh------
Q 015890 187 KRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------ 259 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~------ 259 (398)
++|.++|+++|+++|+||+| +..... .....+.+++++|+||+++ ++.++||++++ +++++.+....
T Consensus 151 ~~i~~l~~~~~~~li~Dea~~~~~~~~--~~~~~~~di~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~ 224 (366)
T 1m32_A 151 DEVGALAHRYGKTYIVDAMSSFGGIPM--DIAALHIDYLISSANKCIQ-GVPGFAFVIAR---EQKLAACKGHSRSLSLD 224 (366)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTC-CCSSEEEEEEE---HHHHTTCTTCCSCSTTC
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCc--cccccCccEEEecCccccc-CCCceEEEEEC---HHHHHhhcCCCCCcccc
Confidence 99999999999999999999 443221 1122245688999999874 23457999999 67665543210
Q ss_pred ------------ccCCCCcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEe
Q 015890 260 ------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWA 322 (398)
Q Consensus 260 ------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~ 322 (398)
....++.+.+.+.++.++++....+ +++..++++++++++.+.|++++. .+..+ ..++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~ 303 (366)
T 1m32_A 225 LYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGF-NTLLDDELHSPIITAF 303 (366)
T ss_dssp HHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCGGGBCSSEEEE
T ss_pred HHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCC-eeccCchhcCceEEEE
Confidence 1113567788888888887753333 577788888999999999987743 55443 34668888
Q ss_pred eCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 323 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 323 ~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.. ..+..++.+.|. ++||.+.+|..| .++++|++++. .+++++++++++|.+++++
T Consensus 304 ~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 304 YSPEDPQYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp ECCCCTTCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred EcCccCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 88741 235778888776 779999998876 57899999997 5799999999999887643
No 103
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=3e-35 Score=279.33 Aligned_cols=341 Identities=13% Similarity=0.122 Sum_probs=243.3
Q ss_pred cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
+|+.++||+.+.+ +++ ++|.+.+++.+++.+... ..|.+..+..++++.+++++. +..+++|++++|+++++
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~ 115 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---GDFAKKTLLVTTGSEAV 115 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---CSSCEEEEEESSHHHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---cccccEEEEeCchHHHH
Confidence 5778999988764 443 689999999998865321 135566777888888888873 21247899999999999
Q ss_pred HHHHH---HhccCCCEEEEeCCCCcChhh-HHHhcCcE-------------EEEeccCCC----CCCCCChHHHHHhhcc
Q 015890 103 VNIVL---TLCDAGDSVVMFAPYYFNSYM-SFQMTGVT-------------HILVGPCSS----KTLHPDADWLEKTLET 161 (398)
Q Consensus 103 ~~~~~---~l~~~gd~Vl~~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~~----~~~~~d~e~l~~~l~~ 161 (398)
..++. .+.++| +|++++|+|+++.. .+...|.+ ++.+ +.+. .++.+|++.|++.++.
T Consensus 116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEe-CCCccccccchHHHHHHHHHHHHh
Confidence 99988 666776 99999999988654 45555532 5556 5542 1234689999999873
Q ss_pred ---CCCCeEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC
Q 015890 162 ---KPTPKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 162 ---~~~~~~v~i~-~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (398)
...+++|+++ +++| || ..++.+++++|.++|++||+++|+||+| +.+.+........+..+.+.|+||.++.
T Consensus 194 ~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~ 272 (426)
T 1sff_A 194 DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAG 272 (426)
T ss_dssp TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGT
T ss_pred ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccC
Confidence 1225777775 4567 99 7889999999999999999999999999 6555532222222222334599999995
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA 310 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~ 310 (398)
|+|+||++++ +++++.+.......+++.+++.++++.++|+...+ .+..++++++++++.+.|+. ++.+.
T Consensus 273 -GlriG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 346 (426)
T 1sff_A 273 -GFPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIG 346 (426)
T ss_dssp -SSCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred -CCceEEEEEc---HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9999999999 77777665433445677889999998887764111 12344555555666555544 33323
Q ss_pred cccCCccEEEEeeCCCC-------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
...+. ++++|+.+... ..+..++..+|+ ++||.+.+|..+ ++++|++++. .+++++++++++|.++++
T Consensus 347 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 347 DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 33455 78888888421 123556777776 789999998753 6899999874 789999999999999987
Q ss_pred HH
Q 015890 383 EL 384 (398)
Q Consensus 383 ~~ 384 (398)
++
T Consensus 423 ~~ 424 (426)
T 1sff_A 423 EA 424 (426)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 104
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=8.3e-36 Score=277.88 Aligned_cols=329 Identities=16% Similarity=0.106 Sum_probs=243.6
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC--------CCCCCCCCCcHHHHHH-HHHHHhhhcCCCCCcEEEecChH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--------ISKYGADEGLPELRDA-LVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~~~~~-l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
++++++|+.|.+..++++.+.+++.+.+.... ...|.+..+..++++. +++++ +.+ +|++++|++
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~~~--~v~~~~g~t 79 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----GCD--VARVTNGAR 79 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----TSS--EEEEESSHH
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----CCC--EEEEeCChH
Confidence 35789999877677789999999999876531 1234466778888888 88887 544 899999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEecc--CCCCCCCCChHHHHHhhccC---CCCeEEEEeCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--CSSKTLHPDADWLEKTLETK---PTPKLVSVVNPG 174 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~d~e~l~~~l~~~---~~~~~v~i~~p~ 174 (398)
+++..++.+++++||+|+++.|+|+++...++..|++++.+ + .+++ +.+|+++|++.++.. +++++|++++|+
T Consensus 80 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~ 157 (371)
T 2e7j_A 80 EAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV-PKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEE-CCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEe-ecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999 7 5543 578999999999721 235999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
||||.+++ +++|.++|+++|+++|+||+| ....+.. ....+.+++++|+||+++. +.|+||++++ +++++
T Consensus 158 nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~di~~~s~sK~~~~-~~~~G~~~~~---~~~~~ 228 (371)
T 2e7j_A 158 GNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMPVS--LKEIGADFIVGSGHKSMAA-SGPIGVMGMK---EEWAE 228 (371)
T ss_dssp TTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBCCC--HHHHTCSEEEEEHHHHSSC-CSSCEEEEEC---TTTTT
T ss_pred CCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCCCC--hhhcCCCEEEecCCcCCCC-CCCcEEEEEe---chhhh
Confidence 99999999 799999999999999999999 4322211 1112345889999999974 4599999999 45555
Q ss_pred H-HHHhhc--cC-----CCCcchHHHHHHHHHhcCCchHHHHHHHHH--HHHHHHHHHHhccCCCCccccCC--ccEEEE
Q 015890 254 Q-LLKVQD--NI-----PICASIISQHLALYSLQTGPEWVTERVKDL--VRNREIIREALSPLGEGAVKGGE--GAIYLW 321 (398)
Q Consensus 254 ~-l~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~ 321 (398)
. +..... .. .++.+...++++..+++.... +..+++ +++++++.+.|++++ +.+..+. .+.++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~ 304 (371)
T 2e7j_A 229 IVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKLG-IKQLGDNPHNHDLMF 304 (371)
T ss_dssp TTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHTT-CEEESSSSCCSSEEE
T ss_pred hhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCccCceEE
Confidence 5 543332 11 345566666666666653111 455666 778888888888774 4665543 366888
Q ss_pred eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC------CCeEE-EEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGHLR-ISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR-i~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.++ +..++.+.|. ++||.+.| ..+.. ++++| ++++. .+++++++++++|+++++++
T Consensus 305 ~~~~----~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 305 FHAE----VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EECH----HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EECC----CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 8886 3567777775 88999988 43321 68899 99995 48999999999999988753
No 105
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=5.2e-34 Score=267.71 Aligned_cols=328 Identities=13% Similarity=0.101 Sum_probs=247.6
Q ss_pred ccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccCCCEE
Q 015890 38 GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSV 116 (398)
Q Consensus 38 g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~V 116 (398)
+..+.++++++++++.+.+.. .+. ....+..+.+.+++.+.++.+.. +|++++|+++++..++.+++++||+|
T Consensus 28 ~p~p~~~~~~v~~a~~~~~~~----~~~--~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 28 GPGPSNLAPRVLAAGSLRMIG----HMQ--KEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp SSSCCCCCHHHHHHTTCCCCC----TTS--HHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred cCCCCCCCHHHHHHhcccccC----ccc--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 334667889999988764322 121 12234555556666666677654 59999999999999999999999999
Q ss_pred EEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015890 117 VMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193 (398)
Q Consensus 117 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~ 193 (398)
+++.++|++ +...++..|.+++.+ +.+.++ .+|+++|++.+++ + +++|++++|+||||.+++ +++|.++|
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~ 174 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQM-IKKPGE-HYTLQEVEEGLAQHK--PVLLFLVHGESSTGVVQP---LDGFGELC 174 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHHHHHhhCC--CcEEEEeccCCcchhhcc---HHHHHHHH
Confidence 999988864 366778899999999 776554 6899999999986 5 499999999999999999 88999999
Q ss_pred HHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------------
Q 015890 194 KAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------------ 260 (398)
Q Consensus 194 ~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~------------ 260 (398)
+++|+++|+||+| ++... ......+.++++.|+||+++ ++.++|+++++ +++++.+.....
T Consensus 175 ~~~~~~li~De~~~~g~~~--~~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
T 3kgw_A 175 HRYQCLLLVDSVASLGGVP--IYMDQQGIDIMYSSSQKVLN-APPGISLISFN---DKAKYKVYSRKTKPVSFYTDITYL 248 (393)
T ss_dssp HHTTCEEEEECTTTTTTSC--CCTTTTTCCEEEEESSSTTC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred HHcCCEEEEECCccccCcc--cchhhcCCCEEEecCccccc-CCCceeEEEEC---HHHHHHHhccCCCCCceeecHHHH
Confidence 9999999999998 44221 22222345688899999874 33448999998 788888764321
Q ss_pred -----------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeC
Q 015890 261 -----------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARL 324 (398)
Q Consensus 261 -----------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~ 324 (398)
...++.+...+.++.++++... ..+++..+++.++++++.+.|++++. .+..+. .++++++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~ 327 (393)
T 3kgw_A 249 AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL-KFFVKDPEIRLPTITTVTV 327 (393)
T ss_dssp HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSSSSGGGBCSSEEEEEC
T ss_pred HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcCCeEEEEeC
Confidence 1134567777777777776422 23678888899999999999988854 554322 246677887
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.. .+..++.++|++++||.+.+|..+..++++|+++ +. .+++++++++++|.++++++.+
T Consensus 328 ~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 328 PAG-YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp CTT-BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred CCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 653 3678888888755599999998777788999998 64 4899999999999999988654
No 106
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1e-33 Score=266.27 Aligned_cols=324 Identities=19% Similarity=0.185 Sum_probs=237.2
Q ss_pred HHHHcCCC-eEEcCCccCCCCCcHHHHHHHHHhhc----CCCCCCCCCCCCcH---HHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 24 ELVRGAKN-AVSLAQGVVYWQPPKMAMEKVKELVW----DPSISKYGADEGLP---ELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 24 ~~~~~g~~-~~~l~~g~~~~~~~~~v~~a~~~~~~----~~~~~~y~~~~~~~---~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
+....|.+ ...++.+.|.++.++.+.+++.+.+. ....+.|+. .+.+ ++++.+++++ +. ++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~--~~~i~~ 83 (404)
T 1e5e_A 11 ACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT--EACVAT 83 (404)
T ss_dssp HHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC--SEEEEE
T ss_pred eeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC--CcEEEe
Confidence 34444443 34678888999877777666555442 223456755 4554 7888888876 44 367888
Q ss_pred cChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (398)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~ 171 (398)
+|+++++..++.+++++||+|+++.|+|+++.. .++..|.+++.+ +.+ |++++++.++++ +++|+++
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~--t~~v~l~ 154 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-NTA------IPGEVKKHMKPN--TKIVYFE 154 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT------STTHHHHHCCTT--EEEEEEE
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC------CHHHHHHhcCCC--CcEEEEE
Confidence 888899999999999999999999999998887 678899999988 653 788999999875 4999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccCC
Q 015890 172 NPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSE 247 (398)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~-~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~ 247 (398)
+|+||||.+++ +++|+++|++ +|+++|+||+| +.+. .+. ..++++++.|+||.++.+|+|+ ||++++
T Consensus 155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~-~~~---~~~~di~~~S~sK~~~~~g~ri~G~~~~~-- 225 (404)
T 1e5e_A 155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT-NPV---DFGVDVVVHSATKYINGHTDVVAGLICGK-- 225 (404)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC-CGG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC--
T ss_pred CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC-Ccc---ccCCEEEEEcCccccCCCCCCeEEEEEEC--
Confidence 99999999998 9999999999 99999999999 3332 111 2357799999999999999998 999999
Q ss_pred cHHHHH-HHHHhhccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--------------CCcc
Q 015890 248 VEGFAT-QLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAV 311 (398)
Q Consensus 248 ~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~ 311 (398)
+++++ .+......+ ..+.+++.++++..+++. ...+.+....+.+.+.+.+++.+ ...+
T Consensus 226 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 300 (404)
T 1e5e_A 226 -ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDI 300 (404)
T ss_dssp -HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHH
T ss_pred -HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHH
Confidence 67777 787766554 456788888888888875 23334444555555555554432 2222
Q ss_pred ccC----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------------------------CCeEEE
Q 015890 312 KGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------------------------RGHLRI 360 (398)
Q Consensus 312 ~~~----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------------------~~~iRi 360 (398)
..+ .++++.| +++. ..+...+++++.||.+ ++..|+. +++|||
T Consensus 301 ~~~~~~~~g~~~~~-~~~~----~~~~~~~~l~~~~i~~-~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi 374 (404)
T 1e5e_A 301 AKKQMRMYGSMITF-ILKS----GFEGAKKLLDNLKLIT-LAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRL 374 (404)
T ss_dssp HHHHCSSCCSEEEE-EETT----HHHHHHHHHHTCSSSE-ESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred HHhhCCCCceEEEE-EeCC----CHHHHHHHHHhCCCce-eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 222 2445554 7753 2344555777889944 4433321 579999
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 361 SFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 361 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
|++. +++++++++|++++..+.+
T Consensus 375 s~g~---e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 375 SVGI---EDADELIADFKQGLDALLR 397 (404)
T ss_dssp ECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred EeCC---CCHHHHHHHHHHHHHHHHH
Confidence 9996 8899999999999988765
No 107
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=3.4e-34 Score=265.64 Aligned_cols=332 Identities=13% Similarity=0.079 Sum_probs=244.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
..+.+++|+.+.+. ++++.+.+++.+.+.. |....+..++++.+++++.+.+|.++++|++++|+++++..++.
T Consensus 11 ~~p~~i~l~~~~~~-~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~ 84 (359)
T 1svv_A 11 AKPKPYSFVNDYSV-GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACS 84 (359)
T ss_dssp ----CEECSCSCSS-CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHH
T ss_pred CCCeeEEecCCCcC-CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHH
Confidence 33568999987666 6799999999998743 55666778899999999999888888899999999999999999
Q ss_pred HhccCCCEEEEeCCCCcChhh--HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-----CCeEEEEeCCCCCCccC
Q 015890 108 TLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-----TPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-----~~~~v~i~~p~nptG~~ 180 (398)
+++++||+|+++.|+|+++.. .++..|.+++.+ +.+ ++.+|++.|++.++++. .+++|++++| ||||.+
T Consensus 85 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~ 160 (359)
T 1svv_A 85 LALRPWEAVIATQLGHISTHETGAIEATGHKVVTA-PCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQ 160 (359)
T ss_dssp HHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEE-CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCC
T ss_pred HHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEE-eCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCcee
Confidence 999999999999999988877 478899999999 765 46789999999997641 2589999998 799999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 254 (398)
++.+++++|+++|+++|+++|+||+| +.....+..... ....+++.|.+|..+ ..++|+++.+ +++++.
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~---~~~~~~ 235 (359)
T 1svv_A 161 YTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILN---DALKPN 235 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECS---GGGCTT
T ss_pred cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEc---ccHHHH
Confidence 99999999999999999999999999 322221111110 112367788999744 3457999988 566555
Q ss_pred HHHhh--ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890 255 LLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332 (398)
Q Consensus 255 l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
+.... ....+..+.+...++..+++. ..+++..+++.++++++.+.| +.+++.+..+.+++++|+.++ .
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------~ 306 (359)
T 1svv_A 236 ARHLIKQRGALMAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------N 306 (359)
T ss_dssp HHHHHHHTTCCCTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------H
T ss_pred HHHHHhcCCcccccchhhHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------H
Confidence 55432 111122222333334445554 345778888889999999988 444557776777888888764 3
Q ss_pred HHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 333 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 333 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
++.++|++++||.+.+. ....++++|++++. .+++++++++++|+++++++
T Consensus 307 ~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 307 TMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp HHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 77787764449998321 11245789999876 68999999999999887653
No 108
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.7e-34 Score=269.33 Aligned_cols=327 Identities=14% Similarity=0.060 Sum_probs=241.6
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
+.+.|+.+.+. ++|+.+++++.+.+.+.. ...|.. .....++++.+++++ +.++++|++++|+++++.
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~al~ 100 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----NADPGGVVLGADRAVLLS 100 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----TCCGGGEEEESCHHHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCChHHHHH
Confidence 47888887766 678999999998876421 112321 223445555555554 777789999999999999
Q ss_pred HHHHHh---ccCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 104 NIVLTL---CDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 104 ~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
.++.++ .++||+|+++.|+|+++...+.. .|.+++.+ +.+..++.+|++.|++.++++ +++|++++|+||
T Consensus 101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~l~~~--~~~v~~~~~~np 177 (406)
T 3cai_A 101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWA-EVDIETGELPTWQWESLISKS--TRLVAVNSASGT 177 (406)
T ss_dssp HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEE-CCCTTTCCCCGGGHHHHCCTT--EEEEEEESBCTT
T ss_pred HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEE-ecCcccCCcCHHHHHHHhCCC--ceEEEEeCCcCC
Confidence 999988 78999999999999887655543 69999999 776444578999999999865 499999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeE-EEEccCCcHHHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQ 254 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~ 254 (398)
||.+++ +++|.++|+++|+++|+|++| ++..... ....+.+++++|+||++| ++ +| |++++ +++++.
T Consensus 178 tG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~---~~~~~~ 246 (406)
T 3cai_A 178 LGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRLLD--IRETDADVVTVNAHAWGG-PP--IGAMVFRD---PSVMNS 246 (406)
T ss_dssp TCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCCCC--HHHHCCSEEEEEGGGGTS-CS--CEEEEESC---HHHHHT
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEcccccCCCCCC--chhcCCCEEEeehhhhcC-CC--cCeEEEEe---hHHHhh
Confidence 999999 889999999999999999999 4432211 111235688999999886 44 89 99998 777766
Q ss_pred HHHhhc---------cCCCCcchHHHHHHHHHhcCCch---------------HHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 255 LLKVQD---------NIPICASIISQHLALYSLQTGPE---------------WVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 255 l~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
+..... ....+.+...+.++.++++.... ++++..+++.++++++.+.|++++++.
T Consensus 247 l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (406)
T 3cai_A 247 FGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVM 326 (406)
T ss_dssp SCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred cCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 644321 11345566666565555543111 567788888899999999998876555
Q ss_pred cccCC--ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC------CCC---CCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890 311 VKGGE--GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACG---CRGHLRISFGG-LVEDDCKAAADRLR 378 (398)
Q Consensus 311 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~ 378 (398)
+..+. .+.++++.++. .+..++.+.|. ++||.+.+|. .++ ..+++|++++. .+++++++++++|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~-~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~ 403 (406)
T 3cai_A 327 LIGRPEAQIPVVSFAVHK--VPADRVVQRLA-DNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALA 403 (406)
T ss_dssp ECCCCSSBCSEEEEEETT--BCHHHHHHHHH-HTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred EcCCccccCCEEEEEECC--cCHHHHHHHHH-HCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHH
Confidence 55542 13367777763 35777888775 7899999987 233 24789999997 68899999998886
Q ss_pred H
Q 015890 379 R 379 (398)
Q Consensus 379 ~ 379 (398)
+
T Consensus 404 ~ 404 (406)
T 3cai_A 404 S 404 (406)
T ss_dssp T
T ss_pred H
Confidence 4
No 109
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=1.8e-34 Score=271.82 Aligned_cols=329 Identities=17% Similarity=0.134 Sum_probs=250.0
Q ss_pred cCCCeEEcCCccCCCC--CcHHHHHHHHHhhcC-CCC---CCCC--CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890 28 GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWD-PSI---SKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~-~~~---~~y~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t 99 (398)
+|+.++||+.|. +++ ++|.+.+++.+.+.. ... ..|. ...+..++++.+++++ +.+ ++++ +++++
T Consensus 43 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-~~i~-~~sGs 115 (401)
T 1fc4_A 43 DGSHVINFCANN-YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GME-DAIL-YSSCF 115 (401)
T ss_dssp TSCEEEECCCSC-TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TCS-EEEE-ESCHH
T ss_pred CCccEEEeeccC-cccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CCC-cEEE-eCChH
Confidence 578899999994 565 589999999888754 111 1221 1345677888888777 555 4554 45557
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCC
Q 015890 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN 175 (398)
Q Consensus 100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~n 175 (398)
+++..++.+++++||.|+++.|+|..+...++..|.+++.+ +. .|++++++.++.. .++++|++++|+|
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 188 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMQELEARLKEAREAGARHVLIATDGVFS 188 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CT------TCHHHHHHHHHHHHHTTCSSEEEEEESEET
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEE-CC------CCHHHHHHHHHHhhccCCCceEEEEeCCcC
Confidence 89999999999999999999999988888899999999888 52 3788999988741 0259999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC---CCcc---ccccCCcEEEEccccccc-CCCcceeEEEEccCC
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD---GRKH---CCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSE 247 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~---~~~~---~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~ 247 (398)
|||.+++ +++|.++|+++|+++|+||+| +.+. +... .....+.+++++|+||.+ |++| ||++++
T Consensus 189 ptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~-- 260 (401)
T 1fc4_A 189 MDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR-- 260 (401)
T ss_dssp TTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC--
T ss_pred CCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC--
Confidence 9999999 999999999999999999999 4543 2211 111234568899999999 5444 999998
Q ss_pred cHHHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890 248 VEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 325 (398)
Q Consensus 248 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 325 (398)
+++++.+..... ..+.+.+.+.++++.++++.... .++..++++++++++.+.|++++. .+. +..++++|+.++
T Consensus 261 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~ 336 (401)
T 1fc4_A 261 -KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSAAGF-TLA-GADHAIIPVMLG 336 (401)
T ss_dssp -HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTTC-CBC-CSSSSEEEEEEE
T ss_pred -HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccc-CCCCCEEEEEcC
Confidence 788888876442 22557888999988888875211 356778888889999999988754 555 445788888886
Q ss_pred CCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.. .+..++.+.|. ++||.+.++..|+. .+++|++++. .+++++++++++|.++++++
T Consensus 337 ~~-~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 337 DA-VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CH-HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred Ch-HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 42 24567777775 77999999887653 3589999986 68999999999999998875
No 110
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.5e-34 Score=270.76 Aligned_cols=331 Identities=14% Similarity=0.084 Sum_probs=243.7
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|+++++|..+.+ +++.+|.+.+++.+.+.+.. ...|+...+..++++.+++++ +. +++|++++|++
T Consensus 44 ~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-~~~i~~~sG~~- 117 (401)
T 2bwn_A 44 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----QK-EAALVFSSAYN- 117 (401)
T ss_dssp CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----TC-SEEEEESCHHH-
T ss_pred CCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----CC-CcEEEECCcHH-
Confidence 3566889988765 55567899999998875411 122444456677888888877 43 56788877765
Q ss_pred HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCC
Q 015890 101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNP 176 (398)
Q Consensus 101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~np 176 (398)
++..++..+. .+||.|+++.|+|+++...++..|.+++.+ +.+ |++++++.++.. .++++|++++|+||
T Consensus 118 a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~le~~l~~~~~~~~~~v~~~~~~np 190 (401)
T 2bwn_A 118 ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RHN------DVAHLRELIAADDPAAPKLIAFESVYSM 190 (401)
T ss_dssp HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTT
T ss_pred HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEE-cCC------CHHHHHHHHHhhccCCceEEEEecCcCC
Confidence 7777777654 589999999999999999899999999988 653 688888888721 13599999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-c--CCCccccc-c--CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-Y--DGRKHCCV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~--~~~~~~~~-~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~ 249 (398)
||.+++ +++|.++|+++|+++|+||+| .+ + .+...... . .+.+++++|+||.+|++| ||++.+ +
T Consensus 191 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~---~ 261 (401)
T 2bwn_A 191 DGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---A 261 (401)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---H
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC---H
Confidence 999999 899999999999999999999 33 3 22221111 1 123688999999999777 999988 7
Q ss_pred HHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890 250 GFATQLLKVQDN--IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326 (398)
Q Consensus 250 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (398)
++++.+...... ...+.+++.++++.++++... ..+++..++++++++++.+.|++.+ +.+..+. +.++++.++.
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~ 339 (401)
T 2bwn_A 262 RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHG-SHIVPVVIGD 339 (401)
T ss_dssp HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCS-SSCEEEECCC
T ss_pred HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-CCeEEEEeCC
Confidence 887777643221 122334577777777776422 2346778888888999999888774 3666666 4578888864
Q ss_pred CCCChHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
. .+..++.++|++++||.+.|+..++.+ +++|++++. .+++++++++++|++++++
T Consensus 340 ~-~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 340 P-VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp H-HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred h-HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 2 245677777766789999998876533 589999996 6899999999999988764
No 111
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=2.3e-33 Score=265.38 Aligned_cols=325 Identities=13% Similarity=0.113 Sum_probs=247.2
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEE-EecChHHHHHHHHHHhccCCCEEEEe
Q 015890 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVM-VTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~-~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
+..+++.+.+++.+.. ...|. ....+..+.+.+++.++++.++++++ +++|+++++..++.+++++||+|+++
T Consensus 19 p~~~~~~v~~a~~~~~----~~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~ 92 (416)
T 3isl_A 19 PVEVDPRVLRVMSTPV----VGQFD--PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIP 92 (416)
T ss_dssp SCCCCHHHHHHTTSCC----CCTTS--HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcCcCHHHHHHhcccC----CCCcc--HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEe
Confidence 5556788877765521 22232 22355667777777777788777665 88999999999999999999999999
Q ss_pred CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
.|+|++ +...++..|.+++.+ +.+.++ .+|+++++++++ +++ ++|++++|+||||.+.+ +++|.++|+++
T Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 165 (416)
T 3isl_A 93 IYGRFGYLLTEIAERYGANVHML-ECEWGT-VFDPEDIIREIKKVKP--KIVAMVHGETSTGRIHP---LKAIGEACRTE 165 (416)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CHHHHHHHHHT
T ss_pred cCCcccHHHHHHHHhcCCeeEEE-ecCCCC-CCCHHHHHHHHhhCCC--cEEEEEccCCCCceecC---HHHHHHHHHHc
Confidence 999987 777888999999999 877654 789999999998 454 99999999999999999 89999999999
Q ss_pred CCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015890 197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------------- 259 (398)
Q Consensus 197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---------------- 259 (398)
|+++|+|++| ++.... .....+.+++++|++|+++ ++.++|+++.+ +++++.+....
T Consensus 166 ~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~---~~~~~~~~~~~~~~~Gw~~~~~~~~~~ 239 (416)
T 3isl_A 166 DALFIVDAVATIGGCEV--KVDEWKIDAAIGGTQKCLS-VPSGMAPITYN---ERVADVIAARKKVERGIATQADRAALS 239 (416)
T ss_dssp TCEEEEECTTTTTTSCC--CTTTTTCSEEECCSSSTTC-CCSSEEEEEEC---HHHHHHHHTC-----------------
T ss_pred CCEEEEECCccccCCCc--chhhcCCCEEEecCccccC-CCCCeEEEEEC---HHHHHHhhccccccccccccccchhcc
Confidence 9999999998 443221 1122345688999999753 34458999998 78877776321
Q ss_pred ----------------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890 260 ----------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG 316 (398)
Q Consensus 260 ----------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 316 (398)
.....+.+...+.++.++++....+ +++..+++.++++++.+.|++.+. .+..+.+
T Consensus 240 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~ 318 (416)
T 3isl_A 240 GNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGL-RLFGDDS 318 (416)
T ss_dssp -CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGG
T ss_pred CCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeccCcc
Confidence 1123456777787777777653344 678888999999999999988644 5655543
Q ss_pred ---cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH-HHHHHHHHHHHHHHHhc
Q 015890 317 ---AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD-CKAAADRLRRGLEELVK 386 (398)
Q Consensus 317 ---~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~-~~~~~~~l~~~~~~~~~ 386 (398)
++++++.+++. .+..++.+.|++++||.+++|.....++++|++++. .++++ +++++++|+++++++..
T Consensus 319 ~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 392 (416)
T 3isl_A 319 CKMPVVTCVEIPGG-IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA 392 (416)
T ss_dssp GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCcEEEEeCCCC-CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 56778888643 367888888875569999998865567899999944 44555 99999999999988753
No 112
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=9.4e-34 Score=267.32 Aligned_cols=350 Identities=15% Similarity=0.122 Sum_probs=252.6
Q ss_pred chHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCC---CcHH--HHHH-HHHHHhhhcCCCC
Q 015890 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE---GLPE--LRDA-LVKKLNQENKLYK 89 (398)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~~~--~~~~-l~~~l~~~~~~~~ 89 (398)
...+..+.+......++++|..|.+++ ||.+.+++.+.+.+.....|+... |.+. +++. ..+++.+.++.++
T Consensus 9 ~~i~~~~~~~~~~~~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~ 86 (407)
T 2dkj_A 9 EALFELIALEEKRQREGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW 86 (407)
T ss_dssp HHHHHHHHHHHHHHHTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhhcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 344555555555557899999999887 899999999988642234564332 3332 3333 3346666667766
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCc--EEEEeccCCCCCCCCChHHHHHhhcc-CC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGV--THILVGPCSSKTLHPDADWLEKTLET-KP 163 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~d~e~l~~~l~~-~~ 163 (398)
++|++++| ++++..++.+++++||+|+++.|+|+++. ..++..|. .++.+ +.+++++.+|++.+++.++. +
T Consensus 87 ~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~- 163 (407)
T 2dkj_A 87 ANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSY-GVRPDTELIDLEEVRRLALEHR- 163 (407)
T ss_dssp EECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CCCTTTSSCCHHHHHHHHHHHC-
T ss_pred ceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEec-CCCcccCccCHHHHHHHHhhcC-
Confidence 55666665 56999999999999999999999998873 44455565 55555 54544567899999999984 4
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
+++|++++|+|| ...+ +++|.++|+++|+++|+||+| . .+.+....... ..+++++|+||++ +|+|+|
T Consensus 164 -~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g~~~G 234 (407)
T 2dkj_A 164 -PKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTL--RGPRGG 234 (407)
T ss_dssp -CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGG--CCCSCE
T ss_pred -CeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccC--CCCCce
Confidence 489999889997 5667 899999999999999999999 3 33343222121 2568899999966 478899
Q ss_pred EEEccCCcHHHHHHHHHhhccCC-CCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc
Q 015890 241 YIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA 317 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~ 317 (398)
|+++++ +++++.+......+. .+.+.....++.++++.. ..++++..++++++++++.+.|++.+. .+.. +..+
T Consensus 235 ~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~ 311 (407)
T 2dkj_A 235 LILSND--PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGY-RIVTGGTDN 311 (407)
T ss_dssp EEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSS
T ss_pred EEEECC--HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCc-eeecCCCCc
Confidence 999885 577777776553333 334444444556666542 356788888999999999999988754 5554 3458
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~ 383 (398)
+++++.++....+..++...| .++||.+.++..+ ..++++|++++. .+++++++++++|++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 312 HLFLVDLRPKGLTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp SEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEECcccCCCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 889999874323567777766 5899999998753 235789999863 4889999999999999887
No 113
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=7e-35 Score=273.42 Aligned_cols=328 Identities=15% Similarity=0.074 Sum_probs=243.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CC---CCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---IS---KYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
++.++|+.+... +.|+.+++++.+.+.+.. .. .|+. ..+..++++.+++++ ++++++|++++|+++++
T Consensus 15 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~ 89 (390)
T 1elu_A 15 ANKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----NVDPNTITITDNVTTGC 89 (390)
T ss_dssp TTSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----TSCGGGEEEESSHHHHH
T ss_pred CCeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----CCCHHHEEEeCChHHHH
Confidence 568899888643 567889999988875421 01 2322 245566777777765 77778999999999999
Q ss_pred HHHHHHh-ccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 103 VNIVLTL-CDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
..++.++ .++||+|+++.|+|+++... ++..|.+++.+ +.+. +++.+|++.|++.++++ +++|++++|+||
T Consensus 90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~np 166 (390)
T 1elu_A 90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPK--TRLVILSHLLWN 166 (390)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTT--EEEEEEESBCTT
T ss_pred HHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE-cCCCCCCccchHHHHHHhcCCC--ceEEEEeccccC
Confidence 9999999 79999999999999886643 46779999988 7652 34678999999999865 599999999999
Q ss_pred CccCCCHHHHHHHHHHHH----HcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890 177 SGTYIPERLLKRISDLCK----AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~----~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 251 (398)
||.+++ +++|.++|+ ++|+++|+||+| ++.... .....+.+++++|+||++. +|.++||++++ +++
T Consensus 167 tG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~--~~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~ 237 (390)
T 1elu_A 167 TGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPL--DFSRLEVDYYAFTGHKWFA-GPAGVGGLYIH---GDC 237 (390)
T ss_dssp TCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBCC--CTTTSCCSEEEEESSSTTC-CCTTCEEEEEC---TTT
T ss_pred CceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcCC--ChhhcCCCEEEcccccccc-CCCceEEEEEC---HHh
Confidence 999999 899999999 999999999999 543221 1122345688999999443 46678999998 555
Q ss_pred HHHHHHhh----------------------ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCC
Q 015890 252 ATQLLKVQ----------------------DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG 307 (398)
Q Consensus 252 ~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~ 307 (398)
++.+.... ....++.+...+.++..+++.. .+++++..++++++++++.+.|++++
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 317 (390)
T 1elu_A 238 LGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLP 317 (390)
T ss_dssp GGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55543311 1123455667777666666531 12467788889999999999998875
Q ss_pred CCccccC--CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 308 EGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 308 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
++.+..+ ..+.++++.++.. .+..++.++|. ++||.+.++. .++++||+++. .+++++++++++|++
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 318 HVHCLATSAPQAGLVSFTVDSP-LGHRAIVQKLE-EQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp TEEESCSSCCSSSEEEEEECSS-SCHHHHHHHHH-HTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred CcEEecCccccccEEEEEcCCC-CCHHHHHHHHH-HCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 5465532 1245555577533 35778888874 8899999976 46899999965 789999999988864
No 114
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.4e-33 Score=265.21 Aligned_cols=332 Identities=14% Similarity=0.124 Sum_probs=242.8
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.| .++++ .+|++.+++.+++.+.. +. ......+.++.+++++.+.++ .+++++++|+++|+.
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~--~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~ 107 (395)
T 3nx3_A 33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HT--SNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIE 107 (395)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CC--CTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-cc--ccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHH
Confidence 367889999988 45555 58999999999886632 22 222345667777777777666 678999999999999
Q ss_pred HHHHHhc-------cCCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 104 NIVLTLC-------DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 104 ~~~~~l~-------~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
.++..+. .++++|++++|+|+++...+...+ .++..+ +. .|+++|+++++++
T Consensus 108 ~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~- 179 (395)
T 3nx3_A 108 GAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA-KY------NDISSVEKLVNEK- 179 (395)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE-CT------TCHHHHHTTCCTT-
T ss_pred HHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe-CC------CCHHHHHHhccCC-
Confidence 9998875 347999999999988765444333 233333 22 2799999999855
Q ss_pred CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890 164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
+++|++.+++|++|.+ ++++++++|.++|++||+++|+||+| ++..+........+....+.|+||.++ +|+|+|
T Consensus 180 -~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~-~G~~~G 257 (395)
T 3nx3_A 180 -TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALG-CGLSVG 257 (395)
T ss_dssp -EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGT-TTSCCE
T ss_pred -eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEeccccc-CCCceE
Confidence 4888888888888876 77888999999999999999999999 555443322222222233457899998 599999
Q ss_pred EEEccCCcHHH-HHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 241 YIAYPSEVEGF-ATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 241 ~i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|++++ +++ ++.+.......+++.++++++++.++++.. +++.++..+.....++.+.+.+..++.+....+. +
T Consensus 258 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g 333 (395)
T 3nx3_A 258 AFVIN---QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL-G 333 (395)
T ss_dssp EEEEC---HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-T
T ss_pred EEEEc---hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE-E
Confidence 99999 777 777766555567788999999998888741 2344444444455556666655555543444444 6
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+++++.++.. .+..+++..++ ++||.+.++. ++++||+++. .+++++++++++|++++++
T Consensus 334 ~~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 334 FMQGLSLDKS-VKVAKVIQKCQ-ENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TEEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCc-chHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 7888888753 25677888775 7899999863 7899999777 6899999999999998764
No 115
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=2.1e-33 Score=262.43 Aligned_cols=325 Identities=18% Similarity=0.149 Sum_probs=240.8
Q ss_pred CCcHHHHHHHHHhhcCCCC---CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc----cCCCE
Q 015890 43 QPPKMAMEKVKELVWDPSI---SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS 115 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~---~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~----~~gd~ 115 (398)
++||.+.+++.+.+.+... ..|....+..+..+.+.+++.++++.+++++++++|+++++..++.++. ++||+
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~ 90 (382)
T 4hvk_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH 90 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence 5689999999998865211 1121122335566677777777778888899999999999999999998 89999
Q ss_pred EEEeCCCCcChhhHHHh---cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890 116 VVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 116 Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
|+++.++|+++...++. .|++++.+ +.+++ +.+|+++|++.+++++ ++|++++|+||||.+.+ +++|.++
T Consensus 91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l 163 (382)
T 4hvk_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV 163 (382)
T ss_dssp EEEETTCCHHHHHHHHHHHHTTCEEEEE-CBCTT-SCBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHHhcCCEEEEe-ccCCC-CCcCHHHHHHHhccCc--eEEEEECCCCCceeeCC---HHHHHHH
Confidence 99999999887765544 69999999 87754 4789999999998765 99999999999999999 8899999
Q ss_pred HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCC
Q 015890 193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPI 264 (398)
Q Consensus 193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~ 264 (398)
|+++|+ +|+|++| ++..... ....+.+++++|+||.+|++| +|+++++++ . .+.... .....
T Consensus 164 ~~~~~~-li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~---~--~~~~~~~~~~~~~~~~~~ 233 (382)
T 4hvk_A 164 LAGKAA-LHIDATASVGQIEVD--VEKIGADMLTISSNDIYGPKG--VGALWIRKE---A--KLQPVILGGGQENGLRSG 233 (382)
T ss_dssp HSSSSE-EEEECTTTBTTBCCC--HHHHTCSEEEEESGGGTSCTT--CEEEEEETT---C--CCCCSSCSSCTGGGTSCS
T ss_pred HHHcCE-EEEEhHHhcCCCCCC--chhcCCCEEEEeHHHhcCCCc--eEEEEEcCc---c--CcCcccccCCCcCccccC
Confidence 999999 9999998 5432211 111234588999999887656 677776642 1 111111 11234
Q ss_pred CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHh
Q 015890 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHR 341 (398)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~ 341 (398)
+.+...+.++..+++...+++++..+++.++++++.+.|++++++.+..+.. .+++++.++. .+..++.+.| .+
T Consensus 234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~ 310 (382)
T 4hvk_A 234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSL-DM 310 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--CCHHHHHHHH-HH
T ss_pred CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC--CCHHHHHHHH-HH
Confidence 5577777777777764345678888999999999999999887656655442 3456666653 3567788776 47
Q ss_pred cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+||.+++|..|.. ++++|++++. .+++++++++++|+++++++.+.
T Consensus 311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp TTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999976642 5789999997 68999999999999999887653
No 116
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=1.5e-33 Score=269.74 Aligned_cols=345 Identities=13% Similarity=0.042 Sum_probs=246.8
Q ss_pred cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||..| .++++ .+|++.+++.+++.+.. +.|....+..+.++++++++.+.++.+.++|++++|+++|++.
T Consensus 48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~ 126 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT 126 (459)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence 57889999987 45554 47999999999887532 2343444566788888888888888778899999999999999
Q ss_pred HHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015890 105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD-------- 151 (398)
Q Consensus 105 ~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d-------- 151 (398)
+++.++. ++++|++..|+|+++...+...+. .+..+ +.+. ..+ .|
T Consensus 127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~-~d~~~~~~~~ 204 (459)
T 4a6r_A 127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHI-EQPWWYKHGKD-MTPDEFGVVA 204 (459)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEe-CCCccccCCcc-cCHHHHHHHH
Confidence 9999875 468999999999987765544322 22233 2211 111 23
Q ss_pred hHHHHHhhcc---CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 152 ADWLEKTLET---KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 152 ~e~l~~~l~~---~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
+++|++.++. .+ +++|+++.+++++|. .++++++++|.++|++||+++|+||+| |++.|........+....+
T Consensus 205 ~~~le~~i~~~~~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi 283 (459)
T 4a6r_A 205 ARWLEEKILEIGADK-VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDL 283 (459)
T ss_dssp HHHHHHHHHHHCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred HHHHHHHHHHcCCCC-EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe
Confidence 7888888862 22 466666666666776 458999999999999999999999999 6565533222111111223
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCCCcchHHHHHHHHHhcCC--chHHHHHH-HHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREII 299 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l 299 (398)
.++||.++.+|+|+|+++++ +++++.+. ......+++.++++++++.++|+.. ++..++.. +.....++.+
T Consensus 284 ~t~sK~l~gg~~~lg~v~~~---~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 284 FTAAKGLSSGYLPIGAVFVG---KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp EEECGGGGTTSSCCEEEEEC---HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHH
T ss_pred eehhhhhcCCCCCccceeeC---HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 36889997444999999998 88888887 3344457788999999999999742 23444555 4555556666
Q ss_pred HHHhccCCCCccccCCccEEEEeeCCCCCCC----------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHH
Q 015890 300 REALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 368 (398)
Q Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 368 (398)
.+.|++++.+....+. ++++++.+.....+ ..++...++ ++||.++++. +++||+++. .+++
T Consensus 361 ~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~~~~~~t~e 433 (459)
T 4a6r_A 361 RETFSRFEHVDDVRGV-GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG-----DHIVSAPPLVMTRA 433 (459)
T ss_dssp HHHHTTCTTEEEEEEE-TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET-----TEEEECCCTTCCHH
T ss_pred HHHHhcCCCeEEEEEE-EEEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC-----CEEEEECCCCCCHH
Confidence 6667766665555566 66666766532111 456677665 7899999863 899999766 6999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 015890 369 DCKAAADRLRRGLEELVK 386 (398)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~ 386 (398)
++++++++|.++++++..
T Consensus 434 ~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 434 EVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988764
No 117
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=2.4e-33 Score=268.53 Aligned_cols=348 Identities=12% Similarity=-0.008 Sum_probs=250.7
Q ss_pred cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||..| .++++ .+|++.+++.+++.+. .+.|....+..+.+.++++++.+.++.+.++|++++|+++|++.
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~ 127 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNL-AYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET 127 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHH-SCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 57889999987 44554 4799999999988653 22343444556778888888888777777899999999999999
Q ss_pred HHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015890 105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD-------- 151 (398)
Q Consensus 105 ~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d-------- 151 (398)
++++++. ++++|++.+++|+++...+...+. .+..+ +.+. +....+
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~g~~~~~~~~~~ 206 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHT-EAPYYFRRTDRSMSEEQFSQHC 206 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEE-CCCCGGGCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEe-CCCccccCCccccChhHHHHHH
Confidence 9999874 458999999999987755543321 23334 3221 111122
Q ss_pred hHHHHHhhcc--CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLET--KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
+++|++.++. ...+++|+++.++|++|. +++++++++|.++|++||+++|+||+| +++.|........+....+.
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~ 286 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI 286 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 6889888862 122577888877888887 678888999999999999999999999 65555332221111122234
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 296 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 296 (398)
++||+++ +| +|+||++++ +++++.+... ....+++.++++++++.++|+.. ++..++..+.....+
T Consensus 287 t~sK~l~-gG~~~lg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 362 (460)
T 3gju_A 287 TIAKGLT-SAYAPLSGVIVA---DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR 362 (460)
T ss_dssp EECGGGT-TTSSCCEEEEEE---HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred eeehhhc-CCCCCeEEEEEC---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 7889997 56 899999999 8888888532 34457788999999999999741 345566666667777
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
+.+.+.+++++.+....+. ++++++.+..... ...++...++ ++||.++++. ..+++||+++. .
T Consensus 363 ~~l~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---~~~~iRi~~~~~~ 437 (460)
T 3gju_A 363 AELAKAVGGHKNVGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMP---QGDILGFAPPLCL 437 (460)
T ss_dssp HHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECS---SSCEEEECCCTTC
T ss_pred HHHHHHHhcCCCeEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCC---CCCEEEEECCCCC
Confidence 7887888877765555565 6667777653211 1345667665 7899999975 45899999765 6
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015890 366 VEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++++++++++|.++++++..
T Consensus 438 t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 438 TREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999988653
No 118
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=1.2e-33 Score=260.94 Aligned_cols=324 Identities=17% Similarity=0.195 Sum_probs=231.8
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
+++++|+.+.++. +++.+++++.+.... ...|.+.++..++++.+++++ +. +++++++|+++++..++.++
T Consensus 3 ~~~i~~~~~~~~~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~~~~~~ 73 (347)
T 1jg8_A 3 HMMIDLRSDTVTK-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----GK--EAALFVPSGTMGNQVSIMAH 73 (347)
T ss_dssp --CEECSCGGGCC-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEeccccCCC-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh----CC--ceEEEecCcHHHHHHHHHHh
Confidence 5689999999877 578899998765432 235767777888999999987 43 46788888899999999999
Q ss_pred ccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCCC-ccCC
Q 015890 110 CDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPS-GTYI 181 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~npt-G~~~ 181 (398)
+++||+|+++.|+|.... ..++..|++++.+ .. + ++.+|++.+++.+++. +++++|++++|+||| |.++
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~ 150 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG-K-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV 150 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE-E-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC
T ss_pred cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC-C-CCccCHHHHHHHhccccccccCceEEEEeccccccCCccC
Confidence 999999999999996533 2567789988877 32 2 3457999999999752 136999999999999 9999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCcccc--ccCCcEEEEcccccccCCCcceeE-EEEccCCcHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQ 254 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~ 254 (398)
+.+++++|+++|+++|+++|+|++| + .+.+..... ...+ .++.|+||+++.+ +| +++.+ +++++.
T Consensus 151 ~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~---~~~~~~ 222 (347)
T 1jg8_A 151 PLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGD---RDFIER 222 (347)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEEC---HHHHHH
T ss_pred cHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc--EEEEecccccCCC---ceEEEEcC---HHHHHH
Confidence 9999999999999999999999987 3 222322211 1233 3445899999743 56 45566 778877
Q ss_pred HHHhhccCCC--CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCCCh
Q 015890 255 LLKVQDNIPI--CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 255 l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 331 (398)
+......... ..+...+.++..+++...+.+++ ..++++.+.+.|++++. .+ ..+..++++|+.++....+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 297 (347)
T 1jg8_A 223 ARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKE----DHENARFLALKLKEIGY-SVNPEDVKTNMVILRTDNLKVNA 297 (347)
T ss_dssp HHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHH----HHHHHHHHHHHHHHHTC-BCCGGGCCSSEEEEECTTSSSCH
T ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCc-eeccCCCcceEEEEEcccccCCH
Confidence 7655432222 23444455555555532222322 23455666676666533 33 23344778999987422367
Q ss_pred HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+++++|. ++||.++++. .+++|++++. .+++++++++++|++++++
T Consensus 298 ~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 298 HGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 78888885 7899999753 5789999865 7899999999999998765
No 119
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.3e-33 Score=266.28 Aligned_cols=332 Identities=16% Similarity=0.130 Sum_probs=242.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.+. ++++ .+|++.+++.+++.+.. .+ ......+..+.+++++.+.++ .+++++++|+++|++
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~~a~~ 110 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFW--HT-GNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE 110 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS--CC-CTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc--cc-cCCcCCHHHHHHHHHHHhhCC--CCeEEEeCcHHHHHH
Confidence 3678899999873 3333 58999999999886531 11 111123445666666666666 458999999999999
Q ss_pred HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
.++.+++. +| |+|++++|+|+++...+...+. ++..+ +. .|+++|++.++++
T Consensus 111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~ 183 (406)
T 4adb_A 111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA-AY------NDINSASALIDDS 183 (406)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE-CT------TCHHHHHTTCSTT
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe-CC------CcHHHHHHHhcCC
Confidence 99998865 66 9999999999998655554443 22222 11 3899999999855
Q ss_pred CCCeEEEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCCc
Q 015890 163 PTPKLVSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G 236 (398)
+++|+++ |+||+|.++ +.+++++|.++|++||+++|+||+| +.+.+...... .....++ |+||.++ +|
T Consensus 184 --~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G 257 (406)
T 4adb_A 184 --TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GG 257 (406)
T ss_dssp --EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TT
T ss_pred --eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CC
Confidence 4888888 999999987 9999999999999999999999999 65655433211 1111222 6799999 99
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccc
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVK 312 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~ 312 (398)
+|+||++++ +++++.+.......+++.+++.++++.++++.... ++..++++++++++.+.|++++ .....
T Consensus 258 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 332 (406)
T 4adb_A 258 FPVGALLAT---EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEV 332 (406)
T ss_dssp SCCEEEEEC---HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCeEEEEEc---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 999999998 78888777665566788899999999988875221 4556666777777777666532 11111
Q ss_pred cCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 313 GGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+ .++++++.++... .+..+++..|+ ++||.+.++. ++++|++++. .+++++++++++|.++++++.++
T Consensus 333 ~~-~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 333 RG-LGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp EE-ETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EE-EEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 12 2677888886531 24678888776 7799999864 7899997666 78999999999999999987653
No 120
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.1e-33 Score=267.64 Aligned_cols=335 Identities=14% Similarity=0.154 Sum_probs=235.4
Q ss_pred HcCCCeEEcCCcc--CCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQA 101 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a 101 (398)
.+|+.++||+.|. ++++. ||++.+++.+++.... .|+...+..+.+..+++.+.+.++.+ +++|++++|++++
T Consensus 39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea 116 (419)
T 2eo5_A 39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEA 116 (419)
T ss_dssp TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHH
T ss_pred CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHH
Confidence 3677899998887 45543 7999999999986532 23222333455667777777777877 7899999999999
Q ss_pred HHHHHHHhcc-CCCEEEEeCCCCcChhhHHH-hc--------C-----cEEEEeccCCCCCCC----------------C
Q 015890 102 FVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQ-MT--------G-----VTHILVGPCSSKTLH----------------P 150 (398)
Q Consensus 102 ~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~-~~--------g-----~~~~~~~~~~~~~~~----------------~ 150 (398)
++.+++++.. +||+|++++|+|+++...+. .. + ..++.+ +.+.. +. +
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~-~~~~~g~~~~~~~~~~~~~ 194 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHV-PYPNP-YRNPWHINGYENPSELVNR 194 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEE-CCCCS-SSCTTCCCTTTCHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEE-CCCcc-ccccccccccccchhhHHH
Confidence 9999987653 48999999999987554332 11 1 245566 54322 21 3
Q ss_pred ChHHHH-HhhccC---CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890 151 DADWLE-KTLETK---PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 151 d~e~l~-~~l~~~---~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i 223 (398)
|+++|+ +.+++. ..+++|+++..+||||. ..+.+++++|.++|++||+++|+||+| +.+.+........+...
T Consensus 195 ~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~ 274 (419)
T 2eo5_A 195 VIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVP 274 (419)
T ss_dssp HHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred HHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCC
Confidence 688999 888731 12355555444567896 678889999999999999999999999 65555322111111111
Q ss_pred EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
.+.|+||.++ +| +|+||++++ ++++ .+ ......+++.++++++++.++|+. +++..++++++++++.+.
T Consensus 275 d~~t~sK~~~-~G~~riG~~~~~---~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~----~~~~~~~~~~~~~~l~~~ 344 (419)
T 2eo5_A 275 DVITLAKALG-GGIMPIGATIFR---KDLD-FK-PGMHSNTFGGNALACAIGSKVIDI----VKDLLPHVNEIGKIFAEE 344 (419)
T ss_dssp SEEEECGGGG-TTTSCCEEEEEE---GGGC-CC-------CCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred CEEEeccccc-CCccceEEEEEc---hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 1337999998 69 999999998 5655 55 323334677899999999999974 223677888889999999
Q ss_pred hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
|+++ +....+. ++++++++........ ++..|+ ++||.++++. .+++||+++. .+++++++++++|.+++
T Consensus 345 L~~~--~~~~~~~-g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l 415 (419)
T 2eo5_A 345 LQGL--ADDVRGI-GLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVI 415 (419)
T ss_dssp HTTS--SSEEEEE-TTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHh--hhheEee-eEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 9876 2344454 6778888842111234 777776 8999999864 6799998775 68999999999999988
Q ss_pred HHH
Q 015890 382 EEL 384 (398)
Q Consensus 382 ~~~ 384 (398)
+++
T Consensus 416 ~~~ 418 (419)
T 2eo5_A 416 KVV 418 (419)
T ss_dssp HHC
T ss_pred Hhc
Confidence 653
No 121
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=5.7e-34 Score=263.47 Aligned_cols=318 Identities=15% Similarity=0.077 Sum_probs=235.4
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhccCCCEE
Q 015890 40 VYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSV 116 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~~gd~V 116 (398)
.+.++||.+++++.+.+.. +.|+ ......++++.+++++ +.+ ++++++++|+++++..++.++++ |+|
T Consensus 7 gp~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~v 77 (353)
T 2yrr_A 7 GPTPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPV 77 (353)
T ss_dssp SSCCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCE
T ss_pred CCCCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcE
Confidence 3566789999998877644 2221 1122344555555554 664 67899999999999999999876 899
Q ss_pred EEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890 117 VMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (398)
Q Consensus 117 l~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~ 194 (398)
+++.++|+++ ...++..|.+++.+ +.+++ +.+|++.+++.+++. ++++|++++|+||||.+++ +++|.++|+
T Consensus 78 l~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~~---~~~i~~l~~ 151 (353)
T 2yrr_A 78 LVLVNGAFSQRVAEMAALHGLDPEVL-DFPPG-EPVDPEAVARALKRR-RYRMVALVHGETSTGVLNP---AEAIGALAK 151 (353)
T ss_dssp EEEECSHHHHHHHHHHHHTTCCEEEE-ECCTT-SCCCHHHHHHHHHHS-CCSEEEEESEETTTTEECC---HHHHHHHHH
T ss_pred EEEcCCCchHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHHhC-CCCEEEEEccCCCcceecC---HHHHHHHHH
Confidence 9999999874 45567889999999 77654 468999999999862 2489999999999999999 889999999
Q ss_pred HcCCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHH--------------h
Q 015890 195 AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK--------------V 258 (398)
Q Consensus 195 ~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~--------------~ 258 (398)
++|+++|+|++| ++.... .....+.++++.|++|++ +++| +||++++ +++++.+.. .
T Consensus 152 ~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~ 224 (353)
T 2yrr_A 152 EAGALFFLDAVTTLGMLPF--SMRAMGVDYAFTGSQKCLSAPPG--LAPIAAS---LEARKAFTGKRGWYLDLARVAEHW 224 (353)
T ss_dssp HHTCEEEEECTTTTTTSCC--CHHHHTCSEEECCTTSTTCCCSS--CEEEEEC---HHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred HcCCeEEEEcCcccccccc--cccccCceEEEecCcccccCCCc--eEEEEEC---HHHHHHhccCCCccccHHHHhhhh
Confidence 999999999999 443221 111123357888999966 4345 6999999 677765531 0
Q ss_pred -hccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCCCCCCChHHH
Q 015890 259 -QDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEV 334 (398)
Q Consensus 259 -~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 334 (398)
.....++.+...+.++.++++..... +++..++++++++++.+.|++.+ +.+..+. .++++++.++.. .+..++
T Consensus 225 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 302 (353)
T 2yrr_A 225 ERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARG-FRPYPKASPLPTVLVVRPPEG-VDADRL 302 (353)
T ss_dssp TTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSSBCTTEEEEECCTT-CCHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CccccCccCCCeEEEEECCCC-CCHHHH
Confidence 12234566777777777777642233 67778888899999999998774 4555443 466677888643 357788
Q ss_pred HHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH-HHHHHHHHHHH
Q 015890 335 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK-AAADRLRRGLE 382 (398)
Q Consensus 335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~-~~~~~l~~~~~ 382 (398)
.+.|. ++||.+.+|..|..++++|++++. .++++++ +++++|+++++
T Consensus 303 ~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 303 VRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp HHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 88776 679999999877778899999954 6788888 99999988765
No 122
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=7.7e-33 Score=256.28 Aligned_cols=330 Identities=15% Similarity=0.124 Sum_probs=234.9
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
.+++++|+.+.+ ..++|++++++.+.+.. ....|+ ..+.++.+++++.++++ .+.++++++|+++++..++.+
T Consensus 6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~----~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 6 RPPALGFSSDNI-AGASPEVAQALVKHSSG-QAGPYG----TDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSA 78 (356)
T ss_dssp CCCCCBCSCGGG-CCCCHHHHHHHHHTTSS-CCCSTT----CSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHT
T ss_pred CCceEeeccCCc-cCCCHHHHHHHHhhccC-cccccc----cchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHH
Confidence 367899998754 45789999999987632 123343 33455556666666556 445699999999999999999
Q ss_pred hccCCCEEEEeCCCCcChhhH--HHhc--CcEEEEeccCCCCCCCCChHHHHH-hhccC-----CCCeEEEEeCCCCCCc
Q 015890 109 LCDAGDSVVMFAPYYFNSYMS--FQMT--GVTHILVGPCSSKTLHPDADWLEK-TLETK-----PTPKLVSVVNPGNPSG 178 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~e~l~~-~l~~~-----~~~~~v~i~~p~nptG 178 (398)
++++||+|+++.|+|++.... +... |.+++.+ +.+ .+.+|+++|++ .+++. .++++|++++|+| ||
T Consensus 79 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG 154 (356)
T 1v72_A 79 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV-DGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VG 154 (356)
T ss_dssp SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC-CCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TS
T ss_pred hcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEe-cCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CC
Confidence 999999999999999776655 6666 9999988 664 25789999999 88752 1368999999886 99
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeece--ec--cCCCccccc--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FM--YDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~livDe~~--~~--~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
.+++.+++++|+++|++||+++|+|++| +. +.+...... ..+..+++.|+||+ +. ....||++++ ++++
T Consensus 155 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~~---~~~~ 229 (356)
T 1v72_A 155 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV-LAAEAIVLFN---TSLA 229 (356)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC-SSCEEEEESS---GGGH
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC-cCccEEEEEC---HHHH
Confidence 9999999999999999999999999999 21 223222221 11223456699998 42 2333488887 6777
Q ss_pred HHHHHhhccCCC-Cc-chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890 253 TQLLKVQDNIPI-CA-SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 330 (398)
Q Consensus 253 ~~l~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
+.+......... .. +...+.++...++. +...+..+++.++++++.+.|++++++.+..+.+++++|+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----- 302 (356)
T 1v72_A 230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTD--DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----- 302 (356)
T ss_dssp HHHHHHHHHTTCCCSSTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----
T ss_pred hhHHHHhhccCchhhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----
Confidence 766544321111 11 22333333444543 3345566777888899999998875556656666888998875
Q ss_pred hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.+++++|. ++||.+.+|. |+ ++++|++++. .+++++++++++|++++++..
T Consensus 303 -~~~~~~l~-~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 303 -SAMIDALL-KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp -HHHHHHHH-HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred -HHHHHHHH-hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 26777774 7899999887 54 7899999876 689999999999998876643
No 123
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=1.3e-32 Score=256.22 Aligned_cols=336 Identities=11% Similarity=0.005 Sum_probs=235.4
Q ss_pred HHHHHHHHH-HcCC-CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE
Q 015890 18 IMVQIQELV-RGAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV 94 (398)
Q Consensus 18 ~~~~~~~~~-~~g~-~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~ 94 (398)
.++.+++.. +.|. +++|++.+.++.++++++++++. . |. +...+++.+++.+++.+|.+ ++++++
T Consensus 14 ~~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~----~-----~~---~~~~~~~~~~~~~a~~~g~~~~~~~~~ 81 (374)
T 2aeu_A 14 ARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN----T-----YI---GSSYFAEKVNEYGLKHLGGDENDKCVG 81 (374)
T ss_dssp HHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT----S-----TT---HHHHHHHHHHHHHHHHHTCCTTEEEEE
T ss_pred HHHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH----H-----hc---CchHHHHHHHHHHHHHhCCCCcceEEE
Confidence 344455554 5676 88999998888889999999985 1 21 11445667777776667763 478999
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE-EEE
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSV 170 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~-v~i 170 (398)
++|+++++..++.++ +||+|+++.|+|+++.. .++..|++++.+ .|++++++. +++ +++ |++
T Consensus 82 ~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~--~~~~v~~ 147 (374)
T 2aeu_A 82 FNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDK--DTLVIIT 147 (374)
T ss_dssp ESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCT--TEEEEEE
T ss_pred EcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCC--ccEEEEE
Confidence 999999999999988 89999999999877554 667889888765 278899888 544 599 999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
++|+||||. +..++++|.++|+++|+++|+||+| ..+. .........+.+++++|+||.++ |+|+||++++
T Consensus 148 ~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~--g~~~G~~~~~-- 221 (374)
T 2aeu_A 148 GSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLME--GPRGGLLAGK-- 221 (374)
T ss_dssp CBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSS--SCSCEEEEEE--
T ss_pred ccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCccccc--CcceEEEEEC--
Confidence 999999996 6677999999999999999999999 3221 11110111234588899999874 7899999998
Q ss_pred cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHH----HHHHHHHhccC---CCCccc-cCCccE
Q 015890 248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRN----REIIREALSPL---GEGAVK-GGEGAI 318 (398)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~-~~~~~~ 318 (398)
+++++.+......+..+++++.+.++..+++.... .+++..+..+.. ++.+.+.|..+ .++.+. .+.+.+
T Consensus 222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~ 300 (374)
T 2aeu_A 222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV 300 (374)
T ss_dssp -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence 78888887766555556788888888888876322 233333333333 45666666654 122333 344344
Q ss_pred EEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEecCCC--HHHHHHHHHHHHHHHHHHhc
Q 015890 319 YLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGGLV--EDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 319 ~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~~~--~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.|...+... .+..+++.++++++||.+.||..|. .++++||+++..+ +.+++++.+.|.++++++.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 301 IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 4454443110 0112366677778999999998763 4679999998622 22477888888888777653
No 124
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-33 Score=263.37 Aligned_cols=318 Identities=15% Similarity=0.135 Sum_probs=237.4
Q ss_pred cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
+|+.++||+.|.+ +++ ++|.+.+++.+.+.+. ....| +..+..++++.+++++ |+ ++++++++|+++++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~-~~~v~~~~g~t~a~ 99 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT-EGKVFFANSGTESV 99 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS-CEEEEEESSHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC-CCeEEEeCchHHHH
Confidence 5678999998873 666 7899999999887532 12346 4445566776666664 66 48899999999999
Q ss_pred HHHHHH---hc---cCC-CEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCCCCCCChHHHHHhhccC
Q 015890 103 VNIVLT---LC---DAG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 103 ~~~~~~---l~---~~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
..++.+ +. ++| |+|++++|+|+++...+...+.. +..+ +. .|+++|++.++++
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~ 172 (375)
T 2eh6_A 100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYA-KL------NDIDSVYKLLDEE 172 (375)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEE-CT------TCHHHHHTTCCTT
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeC-CC------chHHHHHHHhcCC
Confidence 999975 34 678 99999999999877655444322 2222 11 4899999999864
Q ss_pred CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEEcccccccCCCcc
Q 015890 163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~~s~sK~~~~~G~ 237 (398)
+++|++++++||||.+ .+.+++++|.++|+++|+++|+||+| +.+.+........+ ..++ |+||.++ +|+
T Consensus 173 --~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~-~g~ 247 (375)
T 2eh6_A 173 --TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLG-GGV 247 (375)
T ss_dssp --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-TTS
T ss_pred --eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEccccc-CCC
Confidence 5999999999999998 56888999999999999999999999 54444222111111 1233 7789998 799
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
|+||++++ +++++.+.......+++.+.+.+.++.++|+. ..+..++++++++++.+.|++++. ....+ .+
T Consensus 248 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~g 318 (375)
T 2eh6_A 248 PIGAILAR---EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VEKLLPHVREVGNYFKEKLKELGK-GKVKG-RG 318 (375)
T ss_dssp CCEEEEEE---HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTS-SEEEE-ET
T ss_pred CeEEEEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-CCceE-EE
Confidence 99999998 67776665432344566788888888777764 226677788888899988887765 33333 37
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+++|+.++. +..++++.|. ++||.+.++ .++++|++++. .+++++++++++|+++
T Consensus 319 ~~~~~~~~~---~~~~~~~~l~-~~gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 319 LMLGLELER---ECKDYVLKAL-EKGLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp TEEEEECSS---CCHHHHHHHH-HTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEcC---cHHHHHHHHH-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 888888864 3567888776 799999986 36899999875 7899999999999875
No 125
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=1.4e-33 Score=268.86 Aligned_cols=348 Identities=16% Similarity=0.120 Sum_probs=243.5
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~ 102 (398)
.+|+.++||+.|.+ +++ .+|++.+++.+++.+. ..|....+..+.++.+++++.+.++... +++++++|+++++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN 117 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence 35788999998876 344 7899999999998763 3455566778889999999988886655 7999999999999
Q ss_pred HHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEE---------------EEeccCCCCCCCC----ChHHHHHhhc-
Q 015890 103 VNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTH---------------ILVGPCSSKTLHP----DADWLEKTLE- 160 (398)
Q Consensus 103 ~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~----d~e~l~~~l~- 160 (398)
..+++++ ..++++|++.+++|++....+...+... ..+ +.+...... |+++|++.++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~~ 196 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPD-PYRPYRNDPTGDAILTLLTEKLAA 196 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCC-SSSCBTTBTTSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHh
Confidence 9999986 3456899999999988776554443221 112 222111111 6899999993
Q ss_pred c-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 161 T-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 161 ~-~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
. ...+++|++++++|++|.+. +++++++|.++|++||+++|+||+| +.+.+........+....+.|+||.++ +|
T Consensus 197 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~-~G 275 (439)
T 3dxv_A 197 VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLG-GG 275 (439)
T ss_dssp SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGG-TT
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhc-CC
Confidence 1 12257888888888888865 5556999999999999999999999 555553222221111122338999998 69
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 314 (398)
+|+||++++ +++++.+.......++ .++++++++.++++.. ++..++..+.....++.+.+.+..++.+....+
T Consensus 276 ~riG~~~~~---~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 351 (439)
T 3dxv_A 276 LPLSAVIAP---AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRG 351 (439)
T ss_dssp SCCEEEEEE---HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cceEEEEEC---HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 999999998 7888777655445566 8888998888888742 223333333334444455554444555444445
Q ss_pred CccEEEEeeCCC-------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 315 EGAIYLWARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 315 ~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
. ++++++.+.. ...+..++...++ ++||.+.++.. .++++||+++. .+++++++++++|.++++++.+
T Consensus 352 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 352 R-GLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp E-TTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred E-EEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 5 6677776621 1112456777776 77999999753 25899999776 6899999999999999988754
No 126
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=4.9e-34 Score=272.45 Aligned_cols=346 Identities=10% Similarity=0.022 Sum_probs=240.5
Q ss_pred cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHH
Q 015890 28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV 103 (398)
Q Consensus 28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~ 103 (398)
+|+.++||..| .++++ .||++.+++.+++.+. ..|....+..+.+..+++++.+.++.+ .++|++++|+++|++
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 139 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE 139 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence 57889999987 45565 4899999999988763 335444556777888888888877654 578999999999999
Q ss_pred HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC---CCCCCC--------hHHHH
Q 015890 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS---KTLHPD--------ADWLE 156 (398)
Q Consensus 104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~---~~~~~d--------~e~l~ 156 (398)
.+++.+.. .+++|++++++|+++...+...+. .+..+ +.+. +.+..+ ++.|+
T Consensus 140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l~ 218 (453)
T 4ffc_A 140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRM-PASYPLRDEPGLTGEEAARRAISRIE 218 (453)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCTTTSCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccCccccchHHHHHHHHHHHH
Confidence 99987753 458999999999987765544321 23334 3321 111112 45666
Q ss_pred HhhccCCCCeEEEEeCCCCCCc-c-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890 157 KTLETKPTPKLVSVVNPGNPSG-T-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG-~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~ 232 (398)
+.+..++ .++++..|.|++| . ..+++++++|.++|++||+++|+||+| +.+.+........+....+.++||.+
T Consensus 219 ~~i~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~ 296 (453)
T 4ffc_A 219 TQIGAQS--LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGI 296 (453)
T ss_dssp HHTCGGG--EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG
T ss_pred HhcCCCC--EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhh
Confidence 6665443 4444455666555 3 457888999999999999999999999 65555322222112223345789999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
+ +|+|+||++++ +++++.+.......+++.|+++++++.++|+.. ++..++..+.....++.+.+.+++++.+.
T Consensus 297 ~-~G~~~G~~~~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 372 (453)
T 4ffc_A 297 A-GGMPLSAVTGR---AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG 372 (453)
T ss_dssp G-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred c-CCcCeEEEEEC---HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 8 58999999998 788887776666678888999999999988742 23344444444445556666655666544
Q ss_pred cccCCccEEEEeeCCCC------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEK------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
...+. ++++++.+... .....++...++ ++||.+.|+..+ .+++||+++. .+++++++++++|.+++++
T Consensus 373 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 373 EVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp EEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 44454 66777776321 012455666665 889999987543 4789999876 6899999999999999988
Q ss_pred Hhc
Q 015890 384 LVK 386 (398)
Q Consensus 384 ~~~ 386 (398)
+.+
T Consensus 449 ~~~ 451 (453)
T 4ffc_A 449 KAS 451 (453)
T ss_dssp HC-
T ss_pred HHh
Confidence 653
No 127
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=6.7e-34 Score=267.51 Aligned_cols=327 Identities=12% Similarity=0.107 Sum_probs=237.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.+. ++++ .+|++.+++.+++..... +. .....+.++.+++.+.+.++ .+++++++|+++|+.
T Consensus 37 ~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~ 111 (397)
T 2ord_A 37 EKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH--CS-NLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANE 111 (397)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CC-TTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHH
T ss_pred CCCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc--Cc-cccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHH
Confidence 3577899998773 4443 589999999998865321 11 11124566666666666666 578999999999999
Q ss_pred HHHHHhcc------C-CCEEEEeCCCCcChhh-HHHhcCcE------------EEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 104 NIVLTLCD------A-GDSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 104 ~~~~~l~~------~-gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
.++.++.. + +++|++++|+|++... .++..|.+ ++.+ +. .|+++|++.++++
T Consensus 112 ~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~l~~~l~~~- 183 (397)
T 2ord_A 112 AAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYF-EF------NNVEDLRRKMSED- 183 (397)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEE-CT------TCHHHHHHHCCTT-
T ss_pred HHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEe-cC------CCHHHHHHHhhcC-
Confidence 99998863 5 4789999999977554 66667765 5555 43 2899999999864
Q ss_pred CCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCCcce
Q 015890 164 TPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWR 238 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r 238 (398)
+++|++++|+||||. +++.+++++|+++|+++|+++|+||+| +.+.+...... .....++ |+||.++ +|+|
T Consensus 184 -~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~r 259 (397)
T 2ord_A 184 -VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG-GGVP 259 (397)
T ss_dssp -EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSC
T ss_pred -eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC-CCcC
Confidence 599999999999999 999999999999999999999999999 55544322211 1111133 7799998 8999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCccccC
Q 015890 239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGG 314 (398)
Q Consensus 239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~ 314 (398)
+||+++++ +++ .+.......+++.+.+.++++.++|+.... ++..++++++++++.+.|+++ +......+
T Consensus 260 ~G~~~~~~---~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 333 (397)
T 2ord_A 260 IGAVIVNE---RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG 333 (397)
T ss_dssp CEEEEECS---TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred eEEEEEch---Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE
Confidence 99999984 444 443323345667788999988888875222 345566677777777777654 22111233
Q ss_pred CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
. ++++++.++.. .+..++++.|+ ++||.+.++. ++++|++++. .+++++++++++|.+++++
T Consensus 334 ~-g~~~~~~~~~~-~~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 334 M-GLMIGIQFREE-VSNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp E-TTEEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred E-eEEEEEEECCh-HHHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 3 67788888653 25778888876 6899999873 6799999765 6899999999999988754
No 128
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=8.6e-33 Score=260.92 Aligned_cols=327 Identities=13% Similarity=0.120 Sum_probs=241.0
Q ss_pred cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC--CCCC----CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKY----GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~--~~~y----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
+|+.++||+.++. +++.+|.+.+++.+++.+.. ...| +......++++.+++++ +.+ ..++++++++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~ 130 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----GFD--ECLLSQSGWN 130 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----CCC--eEEEecchHH
Confidence 3678999988752 34578999999999886521 1122 22344566777777766 443 3455566679
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
++..++.+++++||.|+++.|+|..+...++..|.+++.+ +. .|+++|++.+++.+ +++|++++|+||||.+
T Consensus 131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~-~~~vi~~~~~nptG~~ 202 (409)
T 3kki_A 131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPF-MH------NNCDHLRMLIQRHG-PGIIVVDSIYSTLGTI 202 (409)
T ss_dssp HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEE-CT------TCHHHHHHHHHHHC-SCEEEEESBCTTTCCB
T ss_pred HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCCc
Confidence 9999999999999999999999999999999999999887 43 48999999998543 4999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
.+ +++|.++|+++|+++|+||+| . +..+..... ...+.++++.|+||.++.+| ||++++ +++++
T Consensus 203 ~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~---~~~~~ 273 (409)
T 3kki_A 203 AP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCN---NEVNR 273 (409)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEES---SSGGG
T ss_pred CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEEC---HHHHH
Confidence 99 999999999999999999999 2 222222111 11234588899999998554 999988 45555
Q ss_pred HHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890 254 QLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331 (398)
Q Consensus 254 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
.+..... ....+.+...++++.++++.. +..++.++.++++++++.+.|++++. .+. + .++++++.++.. .+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~aa~~aal~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~-~~~~~~~~~~~~-~~~ 348 (409)
T 3kki_A 274 CVPFISYPAIFSSTLLPYEAAGLETTLEII-ESADNRRQHLDRMARKLRIGLSQLGL-TIR-S-ESQIIGLETGDE-RNT 348 (409)
T ss_dssp THHHHCHHHHHSBCCCHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-C-SSSEEEEEEESH-HHH
T ss_pred HHHHhCcCccccCCCcHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-C-CCCEEEEEeCCH-HHH
Confidence 5543221 123345666777777777642 22256777888899999999998865 444 3 477788887642 135
Q ss_pred HHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 332 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 332 ~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.++|+ ++||.+.++..+. ..+++||+++. .+++++++++++|+++++.
T Consensus 349 ~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 349 EKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 56778776 6799998866442 35789999986 7899999999999998875
No 129
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=8.7e-33 Score=262.52 Aligned_cols=341 Identities=12% Similarity=0.083 Sum_probs=234.4
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.+. ++++ .+|++.+++.+++.+... ++......+....+++.+.+.++.++++|++++|++++++
T Consensus 40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~ 117 (429)
T 1s0a_A 40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH--VMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVE 117 (429)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC--CCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 3577899998876 3454 589999999998865321 1111111234455555555556777899999999999999
Q ss_pred HHHHHhc---c----CCCEEEEeCCCCcChhhHHHhc-C-------------cEEEEeccCCC----CCC-CCChHHHHH
Q 015890 104 NIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMT-G-------------VTHILVGPCSS----KTL-HPDADWLEK 157 (398)
Q Consensus 104 ~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~----~~~-~~d~e~l~~ 157 (398)
.+++++. + +|++|+++.|+|+++...+... | ..+..+ +.+. ..+ .+|+++|++
T Consensus 118 ~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~ 196 (429)
T 1s0a_A 118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFAR 196 (429)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHH
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEe-CCCcccccccchHHHHHHHHH
Confidence 9998754 2 5899999999998865433221 1 123334 3331 122 478999999
Q ss_pred hhccC-CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890 158 TLETK-PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 158 ~l~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~ 232 (398)
.++.. ..+++|+++.. +||||. ..+.+++++|.++|++||+++|+||+| +++.+........+....+.|+||.+
T Consensus 197 ~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l 276 (429)
T 1s0a_A 197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL 276 (429)
T ss_dssp HHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGG
T ss_pred HHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccc
Confidence 98731 22466666555 799996 567888999999999999999999999 55544322111111111133788999
Q ss_pred CCCc-ceeEEEEccCCcHHHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 233 GMMG-WRVGYIAYPSEVEGFATQLLKVQ-----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 233 ~~~G-~r~G~i~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+ +| +|+||++++ +++++.+.... ...+++.|+++++++.++++...+ ++..++++++++++.+.|+++
T Consensus 277 ~-~G~~~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 277 T-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp G-TSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGG
T ss_pred c-CCCccceEEEeC---HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHH
Confidence 8 68 999999998 78888876531 234667789999998888874111 234456667777888777764
Q ss_pred ---CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 307 ---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 307 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
+.+....+. +++++++++.. .+..++...|+ ++||.+.+. .+++||+++. .+++++++++++|+++++
T Consensus 351 ~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 351 RDAEMVADVRVL-GAIGVVETTHP-VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp GGCTTEEEEEEE-TTEEEEEESSC-BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTS
T ss_pred hcCCCEEEEEEe-eEEEEEEECCc-ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 332333344 66888888643 35677888776 789999883 3789999775 789999999999998875
Q ss_pred HH
Q 015890 383 EL 384 (398)
Q Consensus 383 ~~ 384 (398)
++
T Consensus 423 ~~ 424 (429)
T 1s0a_A 423 DE 424 (429)
T ss_dssp SG
T ss_pred hh
Confidence 53
No 130
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=2.6e-33 Score=266.47 Aligned_cols=346 Identities=13% Similarity=0.110 Sum_probs=236.5
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..+.+ +++ .+|++.+++.+++.+.. + + ...+..+.+..+++.+.+.++.++++|++++|+++|++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~ 116 (433)
T 1zod_A 40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD-H-L-FSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE 116 (433)
T ss_dssp TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCC-C-C-CTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHH
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCc-c-c-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 35778999987654 344 48999999999886531 1 1 12223456667777777777877889999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc--------------CcEEEEeccCCC-CCC--------CCChHHHHHh
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT--------------GVTHILVGPCSS-KTL--------HPDADWLEKT 158 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~--------------g~~~~~~~~~~~-~~~--------~~d~e~l~~~ 158 (398)
.+++.+. ..+++|++++|+|+++...+... |+..+.+ +... ..+ .+|++.|++.
T Consensus 117 ~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~le~~ 195 (433)
T 1zod_A 117 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPA-PFTYRPRFERNGAYDYLAELDYAFDL 195 (433)
T ss_dssp HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECC-CCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecC-CcccccccCCchhhhHHHHHHHHHHH
Confidence 9998754 34579999999998866543321 3333333 2110 111 1368999999
Q ss_pred hccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccC
Q 015890 159 LETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYG 233 (398)
Q Consensus 159 l~~~--~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~ 233 (398)
++.. ..+++|+++..+||||. .++++++++|.++|++||+++|+||+| +.+.+........+....+.|+||.++
T Consensus 196 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~ 275 (433)
T 1zod_A 196 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG 275 (433)
T ss_dssp HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc
Confidence 8731 22466666544688996 578899999999999999999999999 555443222111111122348999998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CC
Q 015890 234 MMGWRVGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG 307 (398)
Q Consensus 234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~ 307 (398)
+|+|+||++++ +++++.+...... .+++.++++++++.++++...+ ++..++++++++++.+.|++ .+
T Consensus 276 -~G~~ig~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~ 349 (433)
T 1zod_A 276 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFD 349 (433)
T ss_dssp -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCCCeeEEEEh---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 59999999999 7888888663222 5677789999988888864111 12334455555555555543 34
Q ss_pred CCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 308 EGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
.+....+. ++++++.++... ....++...++ ++||.+.++..|+.++++||+++. .+++++++++++|.+
T Consensus 350 ~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~ 427 (433)
T 1zod_A 350 CIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427 (433)
T ss_dssp TEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 33334444 677788775311 12566777776 789999998866556899998775 789999999999999
Q ss_pred HHHHH
Q 015890 380 GLEEL 384 (398)
Q Consensus 380 ~~~~~ 384 (398)
+++++
T Consensus 428 ~l~~~ 432 (433)
T 1zod_A 428 AIERA 432 (433)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
No 131
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=5.4e-33 Score=262.93 Aligned_cols=329 Identities=16% Similarity=0.135 Sum_probs=237.7
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||+.|. ++++ .+|++.+++.+++.+.. .+ ......+.++.+++.+.+.++ .+++++++|+++|++.
T Consensus 55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~--~~-~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~ 129 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLW--HT-SNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANET 129 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC--CC-CTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhcc--cc-cCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHH
Confidence 578899998874 4443 58999999999986632 12 112234566777777776666 5789999999999999
Q ss_pred HHHHhcc-------CC-CEEEEeCCCCcChhhH-HHhcCcE------------EEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 105 IVLTLCD-------AG-DSVVMFAPYYFNSYMS-FQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 105 ~~~~l~~-------~g-d~Vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
+++++.. +| ++|++++|+|++.... +...|.+ +..+ +. .|+++|++.++++
T Consensus 130 al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~le~~i~~~- 201 (420)
T 2pb2_A 130 AFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV-PF------NDLHAVKAVMDDH- 201 (420)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEE-CT------TCHHHHHHHCCTT-
T ss_pred HHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEe-cC------CCHHHHHHHhccC-
Confidence 9998875 67 5999999999886543 3444432 3444 32 2899999999864
Q ss_pred CCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--cc-CCcEEEEcccccccCCCcc
Q 015890 164 TPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VE-GDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~-~~~~i~~~s~sK~~~~~G~ 237 (398)
+++|++++++|++|. .++.+++++|.++|+++|+++|+||+| +.+.+..... .. ..+ ++ |+||.++ +|+
T Consensus 202 -~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~d-ii--t~sK~l~-~G~ 276 (420)
T 2pb2_A 202 -TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPD-IL--TSAKALG-GGF 276 (420)
T ss_dssp -EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-EE--EECGGGG-TTS
T ss_pred -ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCC-eE--Eeccccc-CCC
Confidence 589999888888885 589999999999999999999999999 5555543211 11 122 33 7899998 899
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG 313 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~ 313 (398)
|+||++++ +++++.+.......+++.+++.++++.++|+...+ ++..++++++++++.+.|+++ +.+....
T Consensus 277 ~iG~~~~~---~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 351 (420)
T 2pb2_A 277 PVSAMLTT---QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR 351 (420)
T ss_dssp CCEEEEEC---HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred ceEEEEEh---HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999998 67766654433345677889999998888875222 345566666777777666553 3322333
Q ss_pred CCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 314 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+. ++++++.++... .+..++.+.|+ ++||.+.++. ++++|++++. .+++++++++++|.++++++.
T Consensus 352 ~~-g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 352 GM-GLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp EE-TTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ec-ceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44 677788876421 14677888776 6999999863 6799999765 789999999999999987753
No 132
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-32 Score=263.37 Aligned_cols=345 Identities=13% Similarity=0.070 Sum_probs=242.8
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ++++ .||++.+++.+++.+.. +....+..+.+..+++++.+.++.+.+ |++++|+++|++
T Consensus 46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~ 121 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS---YFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANE 121 (452)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC---CCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcC---CcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHH
Confidence 3578899999873 4554 57999999999987632 123445567788888888877776656 999999999999
Q ss_pred HHHHHhc-----c---CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-CCC-CC---------
Q 015890 104 NIVLTLC-----D---AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TLH-PD--------- 151 (398)
Q Consensus 104 ~~~~~l~-----~---~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~~-~d--------- 151 (398)
.+++.++ . ++++|++.+|+|+++.......+. ....+ +.+.. .+. -|
T Consensus 122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (452)
T 3n5m_A 122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHV-TPPDCYRMPGIERENIYDVEC 200 (452)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEE-CCCCTTTSTTTTTSCGGGCHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEe-CCCccccCccCCchhhHHHHH
Confidence 9999987 4 679999999999987755544432 12333 22110 000 02
Q ss_pred hHHHHHhhc-c-CCCCeEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 152 ADWLEKTLE-T-KPTPKLVSVVNP-GNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 152 ~e~l~~~l~-~-~~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
+++|++.++ . ...+++|+++++ +| ||.+. +++++++|.++|++||+++|+||+| +++.|........+....+
T Consensus 201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di 279 (452)
T 3n5m_A 201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDI 279 (452)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCE
Confidence 889999987 1 122577888877 89 99765 8888999999999999999999999 6665543322222222234
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 296 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 296 (398)
.++||.++ +| +|+||++++ +++++.+.. .....+++.++++++++.++|+.. ++..++..+.....+
T Consensus 280 ~t~sK~l~-~G~~~ig~~~~~---~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 355 (452)
T 3n5m_A 280 ITMAKGIT-SAYLPLSATAVK---REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLL 355 (452)
T ss_dssp EEECGGGG-TTSSCCEEEEEE---HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred Eeeccccc-CCCcceEEEEEC---HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 47899998 59 999999998 788877732 123456788999999999988742 233444444555556
Q ss_pred HHHHHHhccCCCCccccCCccEEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecC-C
Q 015890 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-L 365 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~-~ 365 (398)
+.+.+.+++++.+....+. +.++++.+.....+ ..++...++ ++||.+.|+..|. .+++|||+++. .
T Consensus 356 ~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~ 433 (452)
T 3n5m_A 356 EQLKEEIGEHPLVGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVI 433 (452)
T ss_dssp HHHHHHHTTCTTEEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTC
T ss_pred HHHHHHHhcCCCeEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCC
Confidence 6666666666654555555 55666665321111 235666665 8899999987653 36799998776 7
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 015890 366 VEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~ 383 (398)
+++++++++++|.+++++
T Consensus 434 t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 434 SSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999988753
No 133
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-32 Score=257.01 Aligned_cols=328 Identities=12% Similarity=0.059 Sum_probs=237.7
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-c-EEEecChHHHHHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFVNIVLT 108 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~-v~~~~g~t~a~~~~~~~ 108 (398)
...+|+-| +.++||++++++.+.+.. .+ .....++.+.+.+++++.++.+.+ + +++++|++++++.++.+
T Consensus 19 ~~~~~~pg--p~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~ 90 (376)
T 3f0h_A 19 GMLNFTVG--PVMSSEEVRAIGAEQVPY----FR--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMN 90 (376)
T ss_dssp SCEECSSS--SCCCCHHHHHHHTSCCCC----CS--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHH
T ss_pred CceeecCC--CCCCcHHHHHHhcCCCCC----CC--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHh
Confidence 44455544 566799999999776532 12 223356777777777777787642 4 55589999999999999
Q ss_pred hccCCCEEEEeCCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 109 LCDAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
++++||+|+++.|+|++.. ..++..|.+++.+ +.+. ++.+|++.+++.+++++ ++|++++|+||||.++| +
T Consensus 91 ~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~--~~v~~~~~~nptG~~~~---l 163 (376)
T 3f0h_A 91 CFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVAL-KLEH-GKKLTKEKLYEYDNQNF--TGLLVNVDETSTAVLYD---T 163 (376)
T ss_dssp HCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEE-ECCT-TCCCCHHHHHTTTTSCC--CEEEEESEETTTTEECC---H
T ss_pred ccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEE-eCCC-CCCCCHHHHHHhhccCc--eEEEEecccCCcceecC---H
Confidence 9999999999999887644 4567789998888 7764 35789999999887654 99999999999999999 9
Q ss_pred HHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015890 187 KRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD---- 260 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~---- 260 (398)
++|.++|+++|+++|+|+++ +.... ......+.++++.|+||+++ ++| +|+++.+ +++++.+.....
T Consensus 164 ~~i~~l~~~~~~~li~D~~~~~~~~~--~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~ 236 (376)
T 3f0h_A 164 MMIGEFCKKNNMFFVCDCVSAFLADP--FNMNECGADVMITGSQKVLACPPG--ISVIVLA---PRGVERVEKSKVRTMY 236 (376)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSC--CCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC---HHHHHHHHTCCCCCST
T ss_pred HHHHHHHHHcCCEEEEEcCccccCcc--ccccccCccEEEecCcccccCCCc--eEEEEEC---HHHHHHhhcCCCCcee
Confidence 99999999999999999998 33211 11112234588899999997 455 6888888 788877764211
Q ss_pred -------------cCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccccCCc-cEEEEeeC
Q 015890 261 -------------NIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKGGEG-AIYLWARL 324 (398)
Q Consensus 261 -------------~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~ 324 (398)
...++.+...+.++.++++... . .+++..+...++++++.+.|++++. .+..+.. ...+.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~ 315 (376)
T 3f0h_A 237 FDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPF-ELVSESPANGVTSVHP 315 (376)
T ss_dssp TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSE-EECCSSBBTTEEEEEE
T ss_pred ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-ccCccccCceEEEEeC
Confidence 1234555555455555555312 2 4678888889999999999998764 4443321 22222222
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+ ..+..++...|.+++||.+++|.....++++|++++. .+++++++++++|++++++
T Consensus 316 ~--~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 316 T--TANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp S--SSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred C--CCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 2 2367788888875459999998654567899999976 7899999999999988753
No 134
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=1.5e-32 Score=262.16 Aligned_cols=343 Identities=13% Similarity=0.092 Sum_probs=235.9
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. +.++ .+|++.+++.+++.+. ..|....+..+.+.++++++.+.++...++|++++|+++|++
T Consensus 41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 118 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAME 118 (448)
T ss_dssp TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence 3578899999873 3443 4899999999998763 233344566778888999988887766789999999999999
Q ss_pred HHHHHhcc----CC----CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCC-----------CC
Q 015890 104 NIVLTLCD----AG----DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLH-----------PD 151 (398)
Q Consensus 104 ~~~~~l~~----~g----d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~-----------~d 151 (398)
.+++.++. +| |+|+++.|+|+++...+...+. .+..+ +.+ +.+. .|
T Consensus 119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d 196 (448)
T 3dod_A 119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKA-PIP-YVYRSESGDPDECRDQC 196 (448)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEE-CCC-CCTTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEe-CCC-ccccCCccchhhhhHHH
Confidence 99999875 44 9999999999887654433322 12222 222 1111 14
Q ss_pred hHHHHHhhc--cCCCCeEEEEeCCC-CCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 152 ADWLEKTLE--TKPTPKLVSVVNPG-NPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~i~~p~-nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
+++|++.++ ..+ +++|+++.++ |++|. +++++++++|.++|++||+++|+||+| +++.|........+....+
T Consensus 197 ~~~le~~l~~~~~~-~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di 275 (448)
T 3dod_A 197 LRELAQLLEEHHEE-IAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDL 275 (448)
T ss_dssp HHHHHHHHHHHGGG-EEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred HHHHHHHHHhCCCC-EEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCE
Confidence 788999887 222 5777777766 88885 568888999999999999999999999 6655543322222222224
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN 295 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 295 (398)
.++||.++ +| +|+||++++ +++++.+.. .....+++.++++++++.++|+.. ++..++..+.....
T Consensus 276 ~t~sK~l~-~G~~~ig~v~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~ 351 (448)
T 3dod_A 276 MAAGKGIT-GGYLPIAVTFAT---EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKL 351 (448)
T ss_dssp EEECGGGG-TTSSCCEEEEEE---HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEeccccc-CCcCceEEEEEC---HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 47889997 68 599999999 788887765 444567788999999999998742 23344445555555
Q ss_pred HHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC----------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890 296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 364 (398)
Q Consensus 296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~- 364 (398)
++.+.+ +..++.+....+. +.++++.+...... ..+++..++ ++||.+.|+ .+++|++++.
T Consensus 352 ~~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----~~~iRi~~~~~ 423 (448)
T 3dod_A 352 HFLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-----GDVIAFLPPLA 423 (448)
T ss_dssp HHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----TTEEEECCCTT
T ss_pred HHHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----CCEEEEECCCC
Confidence 666666 6666543344444 66777777643211 256777776 789999886 3799998765
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015890 365 LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+++++++++++|.++++++..
T Consensus 424 ~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 424 STAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999988753
No 135
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=6.5e-34 Score=267.82 Aligned_cols=335 Identities=14% Similarity=0.055 Sum_probs=225.9
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
.++.+.|+.+.+. ++||.+.+++.+.+.+.. ...|....+..+..+.+.+++.+.++.++++|++++|+++++..+
T Consensus 18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~ 96 (400)
T 3vax_A 18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA 96 (400)
T ss_dssp ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence 3556666666544 568999999988875310 111222223345566677777777788888999999999999999
Q ss_pred HHHhc----cCCC-EEEEeCCCCcChhhHHHh---cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890 106 VLTLC----DAGD-SVVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 106 ~~~l~----~~gd-~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt 177 (398)
+.+++ ++|| +|+++.++|+++...++. .|++++.+ +.++ ++.+|+++|++.+++++ ++|++++|+|||
T Consensus 97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~v~~~~~~npt 172 (400)
T 3vax_A 97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFL-TPGP-SGRISVEGVMERLRPDT--LLVSLMHVNNET 172 (400)
T ss_dssp HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEE-CCCT-TCCCCHHHHHTTCCTTE--EEEECCSBCTTT
T ss_pred HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEE-ccCC-CCCcCHHHHHHhcCCCc--eEEEEECCCCCc
Confidence 99998 8999 999999999887655543 69999999 8775 45789999999998764 999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHH---
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFA--- 252 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~--- 252 (398)
|.+++ +++|.++|+++|+++|+|++| ++....... .. .+++++|+||.+|++| +|+++ +++ +.+.
T Consensus 173 G~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~~~~--~~-~d~~~~s~~K~~g~~g--~g~~~~~~~--~~~~~~~ 242 (400)
T 3vax_A 173 GVIQP---VAELAQQLRATPTYLHVDAAQGYGKVPGDLT--TP-IDMISISGHKIGAPKG--VGALVTRRR--EEMDDER 242 (400)
T ss_dssp CBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSGGGGG--SC-CSEEEEETGGGTSCSS--CEEEEECBC--SSSTTCB
T ss_pred eeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCCcChh--hc-CcEEEEeHHHhCCCCc--eEEEEEecc--hhccccc
Confidence 99999 899999999999999999999 443221111 12 4488999999877555 57776 664 1111
Q ss_pred HHHHHhh-------ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEe
Q 015890 253 TQLLKVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWA 322 (398)
Q Consensus 253 ~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~ 322 (398)
..+.... .....+.+...+.++..+++...+++++..+++.++++++.+.|+ .+++.+..+.+ ++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~ 321 (400)
T 3vax_A 243 VPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNL 321 (400)
T ss_dssp CCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEE
T ss_pred cccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEE
Confidence 1111111 122445677777777777764334568888889999999999998 66656665553 356667
Q ss_pred eCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEe-cC-CCHHHHHHHHHHHHHHH
Q 015890 323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISF-GG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~-~~-~~~~~~~~~~~~l~~~~ 381 (398)
.++. .+..++.+.| . +||.+++|..|.. ++++||++ +. .+++++++++++|++++
T Consensus 322 ~~~~--~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 322 SFED--VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp ECTT--CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred EeCC--CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 7763 3577788776 4 8999999875532 48999999 75 67899999999998877
Q ss_pred HH
Q 015890 382 EE 383 (398)
Q Consensus 382 ~~ 383 (398)
++
T Consensus 398 ~~ 399 (400)
T 3vax_A 398 PS 399 (400)
T ss_dssp --
T ss_pred cc
Confidence 54
No 136
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=7.9e-33 Score=260.00 Aligned_cols=333 Identities=12% Similarity=0.081 Sum_probs=236.8
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||+.|. ++++ +||.+.+++.+.+..... +.. ....+.++.+++.+.+.++.+++++++++|+++++..
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~ 119 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA--MPQ-TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEA 119 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC--CCT-TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCC--Ccc-ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHH
Confidence 467799998875 5555 899999999998864221 111 1123455666666666667778899999999999999
Q ss_pred HHHHhc--cCCCEEEEeCCCCcChh-hHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 105 ~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
++.++. .+|++|++++|+|++.. ..++..|.+.+. . |...+. ...|+++|++.++++ +++|++++++|
T Consensus 120 al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~-p~~~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~ 196 (395)
T 1vef_A 120 ALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFL-PLVEPVEFIPYNDVEALKRAVDEE--TAAVILEPVQG 196 (395)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGC-SCSSCEEEECTTCHHHHHHHCCTT--EEEEEECSEET
T ss_pred HHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccC-CCCCCeeEeCCCcHHHHHHHhccC--EEEEEEeCccC
Confidence 998874 67899999999997654 455556654210 1 111110 014899999999864 48888877789
Q ss_pred CCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 176 ptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
|||.+ .+.+++++|.++|+++|+++|+||+| +.+.+.... .......++ |+||.++ +|+|+||++++ ++
T Consensus 197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~g~~~G~~~~~---~~ 270 (395)
T 1vef_A 197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-GGVPLGVAVMR---EE 270 (395)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSCEEEEEE---HH
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEccccc-CCCceEEEEeh---HH
Confidence 99986 46888999999999999999999999 544443221 111111233 8899998 48999999998 67
Q ss_pred HHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCC
Q 015890 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL 329 (398)
Q Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 329 (398)
+++.+.......+++.+.+.++++.++++.... .+..++++++++++.+.|++++...+ ..+..++++++.++.
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--- 345 (395)
T 1vef_A 271 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--- 345 (395)
T ss_dssp HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---
T ss_pred HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---
Confidence 776665432344567788888888888874211 34567778888889888887654111 112336788888864
Q ss_pred ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+..++.+.|++++||.+.++ .++++||+++. .+++++++++++|++++
T Consensus 346 ~~~~l~~~l~~~~gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 346 KAAPYIARLEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CSHHHHHHHHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 25678887764789999986 36899999875 78999999999998875
No 137
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=9.1e-32 Score=252.15 Aligned_cols=321 Identities=13% Similarity=0.137 Sum_probs=234.7
Q ss_pred CccCCCCC-c---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-cc
Q 015890 37 QGVVYWQP-P---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CD 111 (398)
Q Consensus 37 ~g~~~~~~-~---~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~ 111 (398)
.+.|++++ | +++++++.+.+... ...|.+..+..++++.+++++ +.+ +.|++++| |+|++.++.++ ++
T Consensus 4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~l~~~la~~~----~~~-~~i~~~sG-t~al~~~l~~l~~~ 76 (388)
T 1b9h_A 4 RKAPEFPAWPQYDDAERNGLVRALEQG-QWWRMGGDEVNSFEREFAAHH----GAA-HALAVTNG-THALELALQVMGVG 76 (388)
T ss_dssp -CCCCCCCSSCCCHHHHHHHHHHHHTS-CCBTTTCSHHHHHHHHHHHHT----TCS-EEEEESCH-HHHHHHHHHHTTCC
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHcC-CeeecCCHHHHHHHHHHHHHh----CCC-eEEEeCCH-HHHHHHHHHHcCCC
Confidence 34566665 5 89999999988764 245667778899999999988 333 45666655 89999999999 89
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
+||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.+++++ ++|+ |+||||.+.+ +++|.+
T Consensus 77 ~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~i~~ 147 (388)
T 1b9h_A 77 PGTEVIVPAFTFISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIM---PVHMAGLMAD---MDALAK 147 (388)
T ss_dssp TTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHHHHH
T ss_pred CcCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCccCcCC---HHHHHH
Confidence 99999999999999999999999999999 8876667889999999997643 7766 8999999998 899999
Q ss_pred HHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--HHHHHHhhcc-----
Q 015890 192 LCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDN----- 261 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--~~~l~~~~~~----- 261 (398)
+|+++|+++|+|++| .+ +.+..... .+ ++++.|+||..+++|.++||+++++ +.+ ++.+......
T Consensus 148 la~~~~~~li~D~a~~~g~~~~~~~~~~--~~-~i~~~S~s~~K~l~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~ 222 (388)
T 1b9h_A 148 ISADTGVPLLQDAAHAHGARWQGKRVGE--LD-SIATFSFQNGKLMTAGEGGAVVFPD--GETEKYETAFLRHSCGRPRD 222 (388)
T ss_dssp HHHHHTCCBCEECTTCTTCEETTEEGGG--SS-SCEEEECCTTSSSCSSSCEEEEECT--TCHHHHHHHHHHTBTTCCTT
T ss_pred HHHHcCCEEEEecchhcCCccCCeeccc--cc-ceEEEEccCCCcccCCCeEEEEECC--HHHHHHHHHHHHHhCCCCcc
Confidence 999999999999999 32 33322221 11 4667788755555567899999884 224 5555433211
Q ss_pred ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc------CCccEEEEeeCC
Q 015890 262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG------GEGAIYLWARLP 325 (398)
Q Consensus 262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~~~~~~~~~~~~ 325 (398)
.++..+....+++...++ ++++..++++++++++.+.|++++++.+.. +.+++++|+.++
T Consensus 223 ~~~~~~~~~g~~~~~~~~~~a~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
T 1b9h_A 223 DRRYFHKIAGSNMRLNEFSASVLRAQLA----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIP 298 (388)
T ss_dssp CSSCCCCSCCCBCBCBHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECT
T ss_pred CccceeecccccCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeC
Confidence 111234444444333333 356677778888999999998876555554 244688999987
Q ss_pred CCC-CChHHHHHHHHHhcCeEEecCCCCC--C---------------------------CCeEEEEecC-C-CHHHHHHH
Q 015890 326 EKH-LDDFEVVRWLAHRHGVVVIPGGACG--C---------------------------RGHLRISFGG-L-VEDDCKAA 373 (398)
Q Consensus 326 ~~~-~~~~~~~~~ll~~~gi~v~~g~~~~--~---------------------------~~~iRi~~~~-~-~~~~~~~~ 373 (398)
... .+..++.+.|. ++||.++++.... . .+.||++++. . +++|++++
T Consensus 299 ~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~ 377 (388)
T 1b9h_A 299 GLTEERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT 377 (388)
T ss_dssp TCCHHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred CcCcccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence 421 13566777775 7899998875321 0 1259999988 7 89999999
Q ss_pred HHHHHHHHHH
Q 015890 374 ADRLRRGLEE 383 (398)
Q Consensus 374 ~~~l~~~~~~ 383 (398)
++.|++++++
T Consensus 378 ~~~l~~~~~~ 387 (388)
T 1b9h_A 378 AEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 138
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.8e-32 Score=252.11 Aligned_cols=325 Identities=11% Similarity=0.049 Sum_probs=239.6
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHh
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l 109 (398)
+.+.|..| +.++|+++++++.+.+.+.....+.......++.+.+.+++.+.++.+ ++++++++|+++++..++.++
T Consensus 4 ~~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 4 NKIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp CCEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred cceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence 35566655 556789999888887766431112233344567777888888877774 678999999999999999999
Q ss_pred ccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 110 CDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
.++ ++++..+.+++ +...++..|++++.+ +.+. ++.+|+|+|+ ++++ +++|++++|+||||.++| ++
T Consensus 82 ~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~--~~~~--~~~v~~~~~~nptG~~~~---l~ 150 (362)
T 3ffr_A 82 VEK--KSFHCVNGSFSKRFYEFAGELGREAYKE-EAAF-GKGFYPADIT--VPAD--AEIICLTHNETSSGVSMP---VE 150 (362)
T ss_dssp CSS--EEEEEECSHHHHHHHHHHHHTTCEEEEE-ECCT-TCCCCGGGCC--CCTT--CCEEEEESEETTTTEECC---HH
T ss_pred cCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEE-ecCC-CCCCCHHHHh--ccCC--ccEEEEEcCCCCcceeCC---HH
Confidence 977 55544444434 345677889999998 7754 3578999998 5554 599999999999999999 88
Q ss_pred HHHHHHHHc-CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015890 188 RISDLCKAA-GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD---- 260 (398)
Q Consensus 188 ~i~~l~~~~-~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~---- 260 (398)
+|.++|+++ |+++|+|++| +........ ..+++++|+||+++ ++| +|+++.+ +++++.+.....
T Consensus 151 ~i~~la~~~p~~~li~D~a~~~~~~~~~~~----~~d~~~~s~~K~~~~~~G--~g~~~~~---~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 151 DINTFRDKNKDALIFVDAVSSLPYPKFDWT----KIDSVFFSVQKCFGLPAG--LGVWILN---DRVIEKSKALLAKRKS 221 (362)
T ss_dssp HHTTSGGGSTTSEEEEECTTTTTSSCCCTT----SCSEEEEETTSTTCCCSC--CEEEEEE---HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCEEEEecccccCCcccChh----HCcEEEEecccccCCCCc--eEEEEEC---HHHHHHhhhccccCCC
Confidence 999999999 9999999999 433221111 14488899999998 666 5778888 777777665432
Q ss_pred -----------------cCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccE
Q 015890 261 -----------------NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAI 318 (398)
Q Consensus 261 -----------------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~ 318 (398)
...++.+...+.++..+++.. ...+++..+++.++++++.+.|++++++.+..+ ..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 301 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT 301 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence 114566777777777777631 122677888889999999999998865455542 2356
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
++++.++. +..++.+.|. ++||.+++|..+..++++|++++. .+++++++++++|++++
T Consensus 302 ~~~~~~~~---~~~~~~~~l~-~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 302 TIVANTTM---LPGEINKILE-PFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEEEESS---CHHHHHHHHG-GGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEecCC---CHHHHHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 67777764 5778888875 669999999777678899999987 68899999999887653
No 139
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=5.3e-32 Score=257.00 Aligned_cols=333 Identities=10% Similarity=0.066 Sum_probs=226.6
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||..|. ++++ .+|.+.+++.+++.+.. .+.. ....+.+..+++.+.+.++ .++|++++|+++|++.
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~ 137 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT--ICSR-AFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANET 137 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS--CCCT-TSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCC--CccC-CcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHH
Confidence 577899998864 4666 89999999999987632 1211 1234455555555555555 5789999999999999
Q ss_pred HHHHhc---------cCC-CEEEEeCCCCcChhhH-HHhcC------------cEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 105 IVLTLC---------DAG-DSVVMFAPYYFNSYMS-FQMTG------------VTHILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 105 ~~~~l~---------~~g-d~Vl~~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
+++.+. .+| ++|++++|+|+++... +...| ..+..+ +. .|++.|++.++.
T Consensus 138 al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l~~ 210 (433)
T 1z7d_A 138 AYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKV-PY------DDLEALEEELKD 210 (433)
T ss_dssp HHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEE-CT------TCHHHHHHHHTS
T ss_pred HHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEe-CC------CCHHHHHHHhCC
Confidence 998864 367 8999999999886542 33323 123333 22 289999999952
Q ss_pred CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-c
Q 015890 162 KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-W 237 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~ 237 (398)
. .+++|+++..+|++|.+ ++++++++|.++|++||+++|+||+| +++.+........+....+.|+||.+| +| +
T Consensus 211 ~-~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~G~~ 288 (433)
T 1z7d_A 211 P-NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALS-GGHY 288 (433)
T ss_dssp T-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTSS
T ss_pred C-CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECcccc-CCCC
Confidence 2 25787777667789985 68889999999999999999999999 555453322111111111238899998 89 8
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG 313 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~ 313 (398)
|+||++++ +++++.+.......+++.++++++++.++|+...+ ++..++.+++.+++.+.|+++ +.+....
T Consensus 289 ~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~ 363 (433)
T 1z7d_A 289 PISAVLAN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVR 363 (433)
T ss_dssp CCEEEEEC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CeEEEEEC---HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 99999999 77777665443455677888999888888874211 134455555666666655543 3222233
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+. ++++++.++....+..+++..|+ ++||.+.|+ ..+++|++++. .+++++++++++|.++++++.
T Consensus 364 ~~-g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 364 GK-GLLCAIEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp EE-TTEEEEEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred ee-eeEEEEEEccChhHHHHHHHHHH-HCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 33 67788888643124677888876 789999885 36799999876 799999999999999988753
No 140
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=2.1e-32 Score=256.10 Aligned_cols=329 Identities=13% Similarity=0.066 Sum_probs=240.3
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
++.+.|..| +..+++++++++.+.... .|.+. ....++++.+++++....++++++|++++|+++++..++.
T Consensus 4 ~~~~~~~p~--p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 4 SVDTLLIPG--PIILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCCEECSSS--SCCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred ccceeecCC--CcCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence 445666665 555788998888765432 12121 1345677788888766556667899999999999999999
Q ss_pred Hhc---cCCCEEEEeC-CCCcCh-hhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 108 TLC---DAGDSVVMFA-PYYFNS-YMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 108 ~l~---~~gd~Vl~~~-p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
++. ++||+|+++. +.|+.. ...++..|++++.+ +. +. ++.+|++.|++.+++.. +++|++++|+||||.++
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~d~~~l~~~l~~~~-~~~v~~~~~~nptG~~~ 154 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKI-GESVPLELITEKLSQNS-YGAVTVTHVDTSTAVLS 154 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEE-CCSST-TSCCCHHHHHHHHHHSC-CSEEEEESEETTTTEEC
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEE-ecCCC-CCCCCHHHHHHHHhcCC-CCEEEEEccCCCcCeEc
Confidence 998 8999998884 455554 36678889999999 77 54 45689999999998622 59999999999999999
Q ss_pred CHHHHHHHHHHHHHc--CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHH-HHH
Q 015890 182 PERLLKRISDLCKAA--GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFAT-QLL 256 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~--~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~-~l~ 256 (398)
+ +++|.++|+++ |+++|+|++| ++.... .....+.+++++|+||+++ ++| +||++++ +++++ .+.
T Consensus 155 ~---l~~i~~~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~---~~~~~~~l~ 224 (385)
T 2bkw_A 155 D---LKAISQAIKQTSPETFFVVDAVCSIGCEEF--EFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYALN 224 (385)
T ss_dssp C---HHHHHHHHHHHCTTSEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHHTC
T ss_pred C---HHHHHHHHHhhCCCCEEEEECccccCCccc--cccccCceEEEecCccccccCCc--ceEEEEc---HHHHHHHHh
Confidence 9 88999999999 9999999999 443221 1222345688999999764 455 5999988 56655 331
Q ss_pred ----------------------Hhhc---cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHh-ccCCCC
Q 015890 257 ----------------------KVQD---NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL-SPLGEG 309 (398)
Q Consensus 257 ----------------------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l-~~~~~~ 309 (398)
.... ...++.+...+.++..+++...+. +++..++++++++++.+.| ++++ +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~ 303 (385)
T 2bkw_A 225 DSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-L 303 (385)
T ss_dssp HHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-C
T ss_pred hccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-c
Confidence 1111 012456777777777777642223 5677888889999999999 8874 3
Q ss_pred ccccC-----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEE-ec----CCCHHHHHHHHHHHH
Q 015890 310 AVKGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRIS-FG----GLVEDDCKAAADRLR 378 (398)
Q Consensus 310 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~-~~----~~~~~~~~~~~~~l~ 378 (398)
.+..+ ..++++++.++. ..++.++|. ++||.+.+|..+. .++++|++ ++ ..+++++++++++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~ 378 (385)
T 2bkw_A 304 TSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIK 378 (385)
T ss_dssp EESSCSSSTTBCSSCEEEECSC----HHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred eecccCcccccCCceEEEecCC----HHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHH
Confidence 55532 246788888863 667888775 7899999987643 46789999 66 258899999999998
Q ss_pred HHHHH
Q 015890 379 RGLEE 383 (398)
Q Consensus 379 ~~~~~ 383 (398)
+++++
T Consensus 379 ~~~~~ 383 (385)
T 2bkw_A 379 LALQR 383 (385)
T ss_dssp HHTTC
T ss_pred HHHHh
Confidence 87653
No 141
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=2e-32 Score=262.12 Aligned_cols=346 Identities=13% Similarity=0.034 Sum_probs=238.4
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..| .++++ .+|++.+|+.+++.+.. +.|....+..+.+..+++.+.+..+.+.++|++++|+++|++
T Consensus 52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND 130 (472)
T ss_dssp TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 457889999987 55665 58999999999987632 233333445667778888887777766789999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc------------EEEEeccCCC----CCCCCC--------
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSS----KTLHPD-------- 151 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~----~~~~~d-------- 151 (398)
.+++.++. ++++|++..++|+++...+...+. .+..+ +.+. ..+ .|
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~-~~~~~~~~~~ 208 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHI-NQPNWWAEGGD-MDPEEFGLAR 208 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEe-CCCccccCCcc-cCHHHHHHHH
Confidence 99999874 458999999999987765544432 23334 3221 111 23
Q ss_pred hHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890 152 ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~ 226 (398)
+++|++.++. ...+++|+++.+++++|.+. +++++++|.++|++||+++|+||+| |++.|........+....+.
T Consensus 209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~ 288 (472)
T 3hmu_A 209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM 288 (472)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee
Confidence 7888888862 12257777777788888755 8889999999999999999999999 66655322211111111133
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCC--chHHHHHH-HHHHHHHHHHHH
Q 015890 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREIIRE 301 (398)
Q Consensus 227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l~~ 301 (398)
++||+++.+|+|+|+++++ +++++.+.. .....+++.++++++++.++|+.. ++..++.. +.....++.+ +
T Consensus 289 t~sK~l~gg~~plG~v~~~---~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L-~ 364 (472)
T 3hmu_A 289 TIAKGLSSGYAPIGGSIVC---DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKW-E 364 (472)
T ss_dssp EECGGGTTTSSCCEEEEEE---HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHH-H
T ss_pred eechhhhcCCcceEEEEEC---HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-H
Confidence 6789998455999999998 888888832 233457788999999999998742 12233333 2333333444 3
Q ss_pred HhccCCCCccccCCccEEEEeeCCCCCC-----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 302 ALSPLGEGAVKGGEGAIYLWARLPEKHL-----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
.|.+.+.+....+. ++++++.+..... ...++...++ ++||.++++. ++|||++.. .++++
T Consensus 365 ~l~~~~~v~~vr~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~p~~~~t~e~ 437 (472)
T 3hmu_A 365 ALTDHPLVGEAKIV-GMMASIALTPNKASRAKFASEPGTIGYICRERCF-ANNLIMRHVG-----DRMIISPPLVITPAE 437 (472)
T ss_dssp GGGGSTTEEEEEEE-TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH-HTTBCCEEET-----TEEEECCCTTCCHHH
T ss_pred HHhcCCCeEEEEec-CceEEEEEecCccccccccchhHHHHHHHHHHHH-HCCcEEEecC-----CEEEEECCCCCCHHH
Confidence 34444544445555 5666666643210 1446677675 7899999862 899999665 69999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 015890 370 CKAAADRLRRGLEELVK 386 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~~~ 386 (398)
+++++++|.++++++.+
T Consensus 438 i~~~l~~l~~~l~~~~~ 454 (472)
T 3hmu_A 438 IDEMFVRIRKSLDEAQA 454 (472)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999977653
No 142
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=2.6e-32 Score=259.55 Aligned_cols=333 Identities=14% Similarity=0.091 Sum_probs=222.1
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCC-----C----cHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE-----G----LPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-----~----~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
++.+.|+.+.+. ++||.+++++.+.+.+ ...|+... + ..++++.+++++ ++++++|++++|+++
T Consensus 17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~ 89 (432)
T 3a9z_A 17 NRKVYMDYNATT-PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI----GGKPQDIIFTSGGTE 89 (432)
T ss_dssp -CCEECBTTTCC-CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH----TCCGGGEEEESCHHH
T ss_pred CCcEEeeCCccC-CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc----CCCcCeEEEeCChHH
Confidence 567888887766 6789999999988754 22342211 1 135555555554 777789999999999
Q ss_pred HHHHHHHHhc--------cCCCEEEEeCCCCcCh-----------------hhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890 101 AFVNIVLTLC--------DAGDSVVMFAPYYFNS-----------------YMSFQMTGVTHILVGPCSSKTLHPDADWL 155 (398)
Q Consensus 101 a~~~~~~~l~--------~~gd~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 155 (398)
++..++.+++ ++||+|+++.|+|+++ ...++..|.+++.+ +.++.++.+|++.|
T Consensus 90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFV-PVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEE-CCCTTTSSCCHHHH
T ss_pred HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEE-ecCcccCCcCHHHH
Confidence 9999999986 5899999999999765 23345578999999 87653457899999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEeece-eccCCCccccccCCcEEE
Q 015890 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG----------SWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~----------~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
++.++++ +++|++++|+||||.+++ +++|.++|+++| +++|+|++| ++......... +..++
T Consensus 169 ~~~i~~~--~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~--~~d~~ 241 (432)
T 3a9z_A 169 LAAVRPT--TCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL--GVDFL 241 (432)
T ss_dssp HHTCCTT--EEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH--CCSEE
T ss_pred HHhccCC--ceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc--CCCEE
Confidence 9999865 499999999999999999 788999999999 999999999 43221111111 23366
Q ss_pred EcccccccCCCcceeEEEEccCCcHHH-HHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890 225 LFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296 (398)
Q Consensus 225 ~~s~sK~~~~~G~r~G~i~~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (398)
+.|+||++| .|+||+++++ +. ...+... .....++.+.+.+.++.++++...+++++..+++.+++
T Consensus 242 ~~s~~K~~g---~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~ 315 (432)
T 3a9z_A 242 TIVGHKFYG---PRIGALYVRG---VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIR 315 (432)
T ss_dssp EEEGGGTTC---CSCEEEEETT---BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEehhHhcC---CcceEEEEcc---ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 899999875 4589999984 32 2222111 11223567778887777777653456778888888899
Q ss_pred HHHHHHhccCCCCccc--cC-----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------------
Q 015890 297 EIIREALSPLGEGAVK--GG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------------- 354 (398)
Q Consensus 297 ~~l~~~l~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------------- 354 (398)
+++.+.|+++++..+. .+ ..+..+++.++....+..++...+ .++.+..|..|..
T Consensus 316 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~ 392 (432)
T 3a9z_A 316 DYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGI 392 (432)
T ss_dssp HHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTC
T ss_pred HHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCC
Confidence 9999888774222221 22 112344445543212344555433 3788777754421
Q ss_pred -----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 355 -----RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 355 -----~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.++|||+++. .+++++++++++|+++++++.+
T Consensus 393 ~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 393 PVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp CHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3789999997 6899999999999999987654
No 143
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-32 Score=260.22 Aligned_cols=341 Identities=10% Similarity=0.029 Sum_probs=229.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ++++ .+|++.+++.+++.+.....| +.....++++.++++ ++ ++++|++++|++++++
T Consensus 52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~----~~-~~~~v~~~~sGsea~~ 125 (434)
T 3l44_A 52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEA----MP-ALDKVRFVNSGTEAVM 125 (434)
T ss_dssp TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHH----CT-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHh----CC-CCCEEEEeCchHHHHH
Confidence 4678899999876 4554 589999999998876433334 444444555555554 44 5789999999999999
Q ss_pred HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCCC-CCC------------CCChHHHHHhhccC-CCCe
Q 015890 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSS-KTL------------HPDADWLEKTLETK-PTPK 166 (398)
Q Consensus 104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~-~~~------------~~d~e~l~~~l~~~-~~~~ 166 (398)
.+++.+.. ++++|+++.|+|+++...+...+.. ...+ ..+. .+. ..|+++|++.++.. ..++
T Consensus 126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (434)
T 3l44_A 126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTL-GTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVA 204 (434)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------C-CCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCccccc-CCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEE
Confidence 99998764 6789999999999876544433321 1111 1110 010 01889999998731 1246
Q ss_pred EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 167 ~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
+|++++++|++|.+. +++++++|.++|++||+++|+||+| | ..+........+....+.|+||.++ +|+|+||++
T Consensus 205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~ 282 (434)
T 3l44_A 205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIG-GGLPIGAYG 282 (434)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGG-TTSSCEEEE
T ss_pred EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhc-CCcCeeeEE
Confidence 677766667777765 8889999999999999999999999 5 4443221111111122458899998 899999999
Q ss_pred ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890 244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 318 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 318 (398)
++ +++++.+... ....+++.++++++++.++++. .++..++..+.....++.+.+.+...+......+. ++
T Consensus 283 ~~---~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~ 358 (434)
T 3l44_A 283 GK---KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRL-KG 358 (434)
T ss_dssp EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE-TT
T ss_pred Ec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEee-cc
Confidence 88 7888776542 2345678899999999888874 12334444444444455555554445553344444 66
Q ss_pred EEEeeCCCCCC------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 319 YLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 319 ~~~~~~~~~~~------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
++++.+..... ...++...|+ ++||.++++. .+.+|+++. .+++++++++++|+++++++.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 359 ALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK----YEAWFLTTE-HTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp EEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST----TCCEECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC----CCcEEEecc-cCHHHHHHHHHHHHHHHHHHHh
Confidence 66666632211 1245666665 7899999874 467898765 5999999999999999988754
No 144
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=7.8e-32 Score=258.90 Aligned_cols=360 Identities=17% Similarity=0.170 Sum_probs=258.4
Q ss_pred hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHH
Q 015890 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKL 81 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l 81 (398)
++++...+.+.+..+.+.....++.++|..+.++ +|+.+++++.+.+.+....+| +......++++.+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 99 (483)
T 1rv3_A 22 AQPLKDSDAEVYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA 99 (483)
T ss_dssp TSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence 4455566666666666655555678999877654 689999999988866321133 22334567888888999
Q ss_pred hhhcCCCCCc----EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH--------HHhcC--cEEEEeccCCCCC
Q 015890 82 NQENKLYKSS----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS--------FQMTG--VTHILVGPCSSKT 147 (398)
Q Consensus 82 ~~~~~~~~~~----v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~~ 147 (398)
++++|.++++ |++++|+ +++..++.+++++||+|+++++.|.++... ++..| ++++.+ +.++++
T Consensus 100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~-~~~~~~ 177 (483)
T 1rv3_A 100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPDT 177 (483)
T ss_dssp HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTTT
T ss_pred HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC-ccccCC
Confidence 9999987643 7777777 999998999999999999999999776532 23334 566666 666556
Q ss_pred CCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEE
Q 015890 148 LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 148 ~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i 223 (398)
+.+|+|+|++.++ +++ ++|++ +++|++ .+++ +++|.++|+++|+++|+|++| +.+.+....... ..++
T Consensus 178 ~~iD~d~le~~i~~~~t--klIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~di 249 (483)
T 1rv3_A 178 GYIDYDRLEENARLFHP--KLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHV 249 (483)
T ss_dssp CSBCHHHHHHHHHHHCC--SEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSE
T ss_pred CcCCHHHHHHHHhhcCC--cEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCcE
Confidence 7899999999998 554 99998 888888 8888 999999999999999999998 233332222221 2347
Q ss_pred EEcccccccCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERV 289 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 289 (398)
+++|+||++ +|+|.||+++++... ++.+.+.... .....+++...+++...+++. ...+++++.
T Consensus 250 v~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 250 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred EEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 889999988 478889999985311 2344443322 222345556666666666654 235678888
Q ss_pred HHHHHHHHHHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe----cCCCCC-CCCeEEEEec
Q 015890 290 KDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGACG-CRGHLRISFG 363 (398)
Q Consensus 290 ~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~iRi~~~ 363 (398)
+++.++++++.+.|.+.+. .+..+. +..++++.+.....+..++... |++.||.+. ||..+. .++++||+++
T Consensus 328 ~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~v~~~~~g~~~~~~~~~-L~~~gI~v~~~~~pg~~~~~~~~~iRis~~ 405 (483)
T 1rv3_A 328 RQVVANCRALSAALVELGY-KIVTGGSDNHLILVDLRSKGTDGGRAEKV-LEACSIACNKNTCPGDKSALRPSGLRLGTP 405 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEEGGGGTCCHHHHHHH-HHHTTEECEEECCSSCSCTTSCCEEEEECH
T ss_pred HHHHHHHHHHHHHHHhcCC-EeccCCCCCceEEEeccCCCCCHHHHHHH-HHhCCcEEecCCCCCCCcCCCCceEEeecC
Confidence 8999999999999988754 655442 3467788886433356666654 468999999 876432 4679999988
Q ss_pred C-CC----HHHHHHHHHHHHHHHHH
Q 015890 364 G-LV----EDDCKAAADRLRRGLEE 383 (398)
Q Consensus 364 ~-~~----~~~~~~~~~~l~~~~~~ 383 (398)
. ++ ++++++++++|.++++.
T Consensus 406 ~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 406 ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 5 34 89999999999999876
No 145
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=3.2e-32 Score=256.09 Aligned_cols=324 Identities=16% Similarity=0.162 Sum_probs=242.2
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.+++||+.|.++++ +++.+++.+.+... .|.+..+..++++.+++++ +. +++++++|+++++..++.++
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~----~~--~~~v~~~~Gt~a~~~~l~~~ 98 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSG---RYLLGPELEGFEAEFAAYC----ET--DHAVGVNSGMDALQLALRGL 98 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHT----TS--SEEEEESCHHHHHHHHHHHT
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHH----CC--CeEEEecCHHHHHHHHHHHh
Confidence 57999999887653 89999999887542 4656667788888888887 43 26778888899999999999
Q ss_pred -ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 -~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
+++||+|+++.|+|+++...++..|.+++.+ +.+++++.+|++.+++.++++ +++|+ ++||||.+.+ +++
T Consensus 99 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~---~~n~tG~~~~---l~~ 169 (399)
T 2oga_A 99 GIGPGDEVIVPSHTYIASWLAVSATGATPVPV-EPHEDHPTLDPLLVEKAITPR--TRALL---PVHLYGHPAD---MDA 169 (399)
T ss_dssp TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCSSSSSBCHHHHHHHCCTT--EEEEC---CBCGGGCCCC---HHH
T ss_pred CCCCcCEEEECCCccHHHHHHHHHCCCEEEEE-ecCCCCCCcCHHHHHHhcCCC--CeEEE---EeCCcCCccC---HHH
Confidence 8999999999999999999999999999999 877655678999999999864 47776 5689999998 899
Q ss_pred HHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015890 189 ISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-- 261 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-- 261 (398)
|.++|+++|+++|+|++| +. +++..... . .++++.|+ +|.+|.+| ++|+++.++ +++++.+......
T Consensus 170 i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~-~di~~~S~~~sK~~~~~G-~~g~~~~~~--~~~~~~l~~~~~~g~ 243 (399)
T 2oga_A 170 LRELADRHGLHIVEDAAQAHGARYRGRRIGA--G-SSVAAFSFYPGKNLGCFG-DGGAVVTGD--PELAERLRMLRNYGS 243 (399)
T ss_dssp HHHHHHHHTCEECEECTTCTTCEETTEETTC--T-TCEEEEECCTTSSSCCSS-CCEEEEESC--HHHHHHHHHHHBTTC
T ss_pred HHHHHHHcCCEEEEECcccccCccCCeeccc--c-cCEEEEeCCCCccCCcCC-ceEEEEeCC--HHHHHHHHHHHhcCc
Confidence 999999999999999999 32 33322111 1 24778888 79999778 899998865 6787777665432
Q ss_pred ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCCC
Q 015890 262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLD 330 (398)
Q Consensus 262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 330 (398)
.++..+...++++.+.++. +++..++.+++++++.+.|++++++.+. .+..++++|+.++....+
T Consensus 244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T 2oga_A 244 RQKYSHETKGTNSRLDEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTER 319 (399)
T ss_dssp SSTTCCCSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSS
T ss_pred cccccccccccCCCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCC
Confidence 1234566777776667654 3445556667788899999887554553 243455554322211125
Q ss_pred hHHHHHHHHHhcCeEEecCCCCC-----------C------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGGACG-----------C------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~~~~-----------~------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
..++.+.|. ++||.++++.... . .+.|||+++. .+++|+++++++|+++++++
T Consensus 320 ~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 320 RDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 677888775 7899998754210 0 1579999987 79999999999999988754
No 146
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=5.3e-32 Score=259.60 Aligned_cols=345 Identities=11% Similarity=0.037 Sum_probs=243.2
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..| .+.++ .+|++.+|+.+++.+.. + +....+..+.+.++++++.+.++.+.+.|++++|+++|++
T Consensus 51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~-~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 128 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-Y-ASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVD 128 (476)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-C-CCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-C-cccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHH
Confidence 467889999987 45565 58999999999987631 1 2122456788899999999888777789999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCC--CCCCCC--------h
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSS--KTLHPD--------A 152 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d--------~ 152 (398)
.+++.++. .+++|++..|+|+++...+...+.. +..+ +.+. ..+..+ +
T Consensus 129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 207 (476)
T 3i5t_A 129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFL-SSPNPRHAGNRSQEAFLDDLV 207 (476)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEE-CCCCGGGCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEe-CCCcccccCCCchHHHHHHHH
Confidence 99999863 3579999999999887655443321 2222 2111 001112 7
Q ss_pred HHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEEEc
Q 015890 153 DWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVNLF 226 (398)
Q Consensus 153 e~l~~~l~~-~-~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~~~ 226 (398)
++|++.++. . ..+++|+++.++|++|. +++++++++|.++|++||+++|+||+| |++.|...... ..+....+.
T Consensus 208 ~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~ 287 (476)
T 3i5t_A 208 QEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII 287 (476)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh
Confidence 889888862 1 22578888888888886 788999999999999999999999999 66666432222 111111133
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890 227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298 (398)
Q Consensus 227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (398)
++||.++ +| +|+|+++++ +++++.+... ....+++.++++++++.++|+...+ ++..++.+++.++
T Consensus 288 t~sK~l~-~G~~plg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~ 361 (476)
T 3i5t_A 288 TFAKGVT-SGYVPLGGLAIS---EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--EGIVDQAREMADY 361 (476)
T ss_dssp EECGGGG-TTSSCCEEEEEC---HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHH
T ss_pred hhhhhhc-CCCcCeEEEEEC---HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh--HHHHHHHHHHHHH
Confidence 6789998 68 999999998 8888877653 3345778899999999999974211 2334444555555
Q ss_pred HHHHhcc---CCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890 299 IREALSP---LGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 364 (398)
Q Consensus 299 l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~- 364 (398)
+++.|+. .+.+....+. +.++++.+..... ....++..++ ++||.+.+. .+++||++..
T Consensus 362 l~~~L~~l~~~~~v~~v~~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRi~p~l~ 434 (476)
T 3i5t_A 362 FAAALASLRDLPGVAETRSV-GLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPL-----GDLCVISPPLI 434 (476)
T ss_dssp HHHHHHTTTTSTTEEEEEEE-TTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTT
T ss_pred HHHHHHHHhcCCCeEEEEec-CceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEec-----CCEEEEECCCC
Confidence 5555543 4444444555 5666677654211 1345667665 789999984 2899999665
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 365 LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
.+++++++++++|.++++++.++
T Consensus 435 ~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 435 ISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999887653
No 147
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=4.9e-32 Score=258.57 Aligned_cols=344 Identities=15% Similarity=0.055 Sum_probs=236.5
Q ss_pred cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHH
Q 015890 28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV 103 (398)
Q Consensus 28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~ 103 (398)
+|+.++||..| .++++ .+|++.+++.+++.+. ..|....+..+.+.++++++.+.++.. .++|++++|+++|++
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 136 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE 136 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence 57889999987 45555 4899999999998763 335444566778888888888877644 578999999999999
Q ss_pred HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC-----------CCC-CCChHHH
Q 015890 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-----------KTL-HPDADWL 155 (398)
Q Consensus 104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-----------~~~-~~d~e~l 155 (398)
.+++.+.. .+++|++..++|+++...+...+. .+..+ +.+. +++ ..+++.+
T Consensus 137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~ 215 (451)
T 3oks_A 137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRA-PLSYPFRDAEFGKELATDGELAAKRA 215 (451)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEE-CCCCHHHHGGGCTTTTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccccchhhHHHHHHH
Confidence 99988764 448999999999987765543321 33344 3321 000 0124444
Q ss_pred HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccc
Q 015890 156 EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSF 228 (398)
Q Consensus 156 ~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~ 228 (398)
++.++ ..+ +++|+++..+++.|. ..+++++++|.++|++||+++|+||+| +.+.|........+....+.|+
T Consensus 216 ~~~l~~~~~~~~-~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~ 294 (451)
T 3oks_A 216 ITVIDKQIGADN-LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVT 294 (451)
T ss_dssp HHHHHHHTCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE
T ss_pred HHHHHhhcCCCC-EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeee
Confidence 44443 233 455555544444455 457778999999999999999999999 6555543222222222223488
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccC
Q 015890 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
||.++ +|+|+||++++ +++++.+.......+++.++++++++.++|+.. ++..++..+.....++.+.+.+++.
T Consensus 295 sK~l~-~G~~iG~v~~~---~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 370 (451)
T 3oks_A 295 AKGIA-GGLPLSAVTGR---AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAED 370 (451)
T ss_dssp CGGGG-TTSSCEEEEEE---HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhh-CCcceEEEEEC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99998 59999999998 788887766666678889999999999998742 2334444444445555666655556
Q ss_pred CCCccccCCccEEEEeeCCC------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPE------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+.+....+. +.++++.+.. ......++...++ ++||.+.|+..+ .+++||+++. .+++++++++++|.+
T Consensus 371 ~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~ 446 (451)
T 3oks_A 371 DRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEE 446 (451)
T ss_dssp TTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 654444454 6677776632 0112445666665 889999997543 4689999877 689999999999999
Q ss_pred HHHH
Q 015890 380 GLEE 383 (398)
Q Consensus 380 ~~~~ 383 (398)
++++
T Consensus 447 ~l~~ 450 (451)
T 3oks_A 447 VLRG 450 (451)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8763
No 148
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=1.2e-31 Score=254.77 Aligned_cols=329 Identities=13% Similarity=0.139 Sum_probs=236.4
Q ss_pred cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
+|+.++||..|.+ +++ .+|++.+++.+++.+.... .| +.....++++.+++++ + .+++++++|+++|+
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g--~~~v~~~~sGseA~ 146 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF----N--YHKVLPMNTGVEAG 146 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc----C--CCEEEEeCCHHHHH
Confidence 4678999998754 455 8999999999998763211 12 2334455666666654 4 57899999999999
Q ss_pred HHHHHHhc---------cCC-CEEEEeCCCCcChhh-HHHhcC------------cEEEEeccCCCCCCCCChHHHHHhh
Q 015890 103 VNIVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTL 159 (398)
Q Consensus 103 ~~~~~~l~---------~~g-d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~e~l~~~l 159 (398)
+.+++++. .+| |+|++++|+|++... .+...| ..+..+ +. .|+++|++.+
T Consensus 147 ~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l 219 (439)
T 2oat_A 147 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-PY------NDLPALERAL 219 (439)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE-CS------SCHHHHHHHT
T ss_pred HHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe-CC------CCHHHHHHHh
Confidence 99999875 356 899999999988654 333334 344444 32 2899999999
Q ss_pred ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
+... +++|+++..+|++|. .++++++++|.++|++||+++|+||+| +++.|........+....+.|+||.++ +|
T Consensus 220 ~~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~-~G 297 (439)
T 2oat_A 220 QDPN-VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALS-GG 297 (439)
T ss_dssp TSTT-EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TT
T ss_pred CCCC-EEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEeccccc-CC
Confidence 5322 577777766788997 568889999999999999999999999 555453322111111111238899998 68
Q ss_pred -ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc--ccc
Q 015890 237 -WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA--VKG 313 (398)
Q Consensus 237 -~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~ 313 (398)
+|+||++++ +++++.+.......+++.++++++++.++++...+ ++..++++++.+++.+.|++++... ...
T Consensus 298 ~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 372 (439)
T 2oat_A 298 LYPVSAVLCD---DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAVR 372 (439)
T ss_dssp SSCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEE
T ss_pred CCCeEEEEEC---HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 899999999 77777665544455677888999888888874211 2456777888889999998764311 122
Q ss_pred CCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+. ++++++.++... .+..+++..|+ ++||.+.|+ .++++|++++. .+++++++++++|.+++++
T Consensus 373 ~~-g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 373 GK-GLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EE-TTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBS----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ee-eeEEEEEEecCccHHHHHHHHHHH-HCCeEEecC----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 33 677888886431 24677888776 789999984 36899998875 7899999999999988764
No 149
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.8e-32 Score=258.56 Aligned_cols=341 Identities=10% Similarity=0.003 Sum_probs=239.3
Q ss_pred cCC--CeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 28 GAK--NAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 28 ~g~--~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
+|+ .|+||..| .+.++ .+|++.+++.+++.+.. .+.......+....+++.+.+.++.+.++|++++|+++|+
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~ 148 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN--HVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSV 148 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS--CCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHH
Confidence 778 99999987 45565 68999999999886531 2211223345666777777776676778999999999999
Q ss_pred HHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCCCCC-CCChHHHHHhh
Q 015890 103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSSKTL-HPDADWLEKTL 159 (398)
Q Consensus 103 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~-~~d~e~l~~~l 159 (398)
+.+++.++. +| ++|++.+++|++....+...+. .+..+ +.+..++ ..|++.|++.+
T Consensus 149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~d~~~le~~l 227 (457)
T 3tfu_A 149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFA-PQVPRDYDPAYSAAFEAQL 227 (457)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEE-CCCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEe-cCCCcccCHHHHHHHHHHH
Confidence 999998875 55 5899999999887655544421 22222 3222221 23789999998
Q ss_pred ccC-CCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC
Q 015890 160 ETK-PTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 160 ~~~-~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (398)
+.. ..+++|++++ ++|++|.+. +++++++|.++|++||+++|+||+| |++.|........+....+.|+||.++
T Consensus 228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~- 306 (457)
T 3tfu_A 228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALT- 306 (457)
T ss_dssp HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-
T ss_pred HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhh-
Confidence 721 1258888887 899999865 7888999999999999999999999 655554322211111111238899997
Q ss_pred Cc-ceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC--
Q 015890 235 MG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-- 306 (398)
Q Consensus 235 ~G-~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 306 (398)
+| +|+||++++ +++++.+... ....+++.|+++++++.++|+...+ ++..++.+++.+++++.|+++
T Consensus 307 gG~~~lG~v~~~---~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l~~ 381 (457)
T 3tfu_A 307 GGYLSLAATLCT---ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTARA 381 (457)
T ss_dssp TTSSCCEEEEEE---HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGGGG
T ss_pred CCCcceEEEEEc---HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhc
Confidence 55 699999999 8888888522 3345678899999999988874111 123444555555555555543
Q ss_pred -CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 307 -GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.+....+. ++++++.++.. .+..++...++ ++||.++|. .+++||+++. .+++++++++++|+++++++
T Consensus 382 ~~~v~~vr~~-G~~~~i~l~~~-~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 382 LPAVTDVRVC-GAIGVIECDRP-VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp STTEEEEEEC-SSCEEEEESSC-CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCeeeeecC-CeEEEEEECCc-ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 333334445 67777888653 25678888876 779999874 3789999776 68999999999999999875
Q ss_pred h
Q 015890 385 V 385 (398)
Q Consensus 385 ~ 385 (398)
.
T Consensus 454 ~ 454 (457)
T 3tfu_A 454 G 454 (457)
T ss_dssp -
T ss_pred c
Confidence 4
No 150
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=1.9e-31 Score=250.73 Aligned_cols=316 Identities=20% Similarity=0.183 Sum_probs=215.3
Q ss_pred EEcCCccCCCCCcHHHHHHHHHhhc---C-CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 33 VSLAQGVVYWQPPKMAMEKVKELVW---D-PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 33 ~~l~~g~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
..++.+.+++..++.+.+++.+.+. + ...+.|. .+..+..+.+++.+.++++.+ +.++++++++++..++.+
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~ 98 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYT--RLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLT 98 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBT--TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCcee--CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHH
Confidence 3577787777666555444444332 1 1123332 222344445555555545654 566666677999999999
Q ss_pred hccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 109 LCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
++++||+|+++.|+|+++...+ +..|.+++.+ +.+ |++++++.++++ +++|++++|+||||.+++
T Consensus 99 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~-- 167 (398)
T 2rfv_A 99 LCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-DAA------KPEEIRAAMRPE--TKVVYIETPANPTLSLVD-- 167 (398)
T ss_dssp HCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-CTT------SHHHHHHHCCTT--EEEEEEESSBTTTTBCCC--
T ss_pred HhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHhcCCC--CeEEEEECCCCCCCcccC--
Confidence 9999999999999999887765 7889999988 553 799999999865 499999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN 261 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~ 261 (398)
+++|.++|+++|+++|+||+| ....+.+. ..+.++++.|+||.++.+|.|+ ||++++ +++++ .+......
T Consensus 168 -l~~i~~l~~~~~~~li~De~~~~~~~~~~~---~~~~di~~~s~sK~~~~~g~~~~G~~~~~---~~~~~~~~~~~~~~ 240 (398)
T 2rfv_A 168 -IETVAGIAHQQGALLVVDNTFMSPYCQQPL---QLGADIVVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKD 240 (398)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTCTTTCCGG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHH
T ss_pred -HHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCcEEEEeCcccccCCCCceEEEEEEC---HHHHHHHHHHHHHh
Confidence 999999999999999999999 33322221 2246688999999998899998 999999 67766 56655554
Q ss_pred C-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--------------CCccccC---CccEEEEee
Q 015890 262 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAVKGG---EGAIYLWAR 323 (398)
Q Consensus 262 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~---~~~~~~~~~ 323 (398)
. +.+.+++.++++.++++.. ....+...++.+.+.+.|++.+ .+.+..+ ..+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~ 316 (398)
T 2rfv_A 241 ITGGCMSPFNAWLTLRGVKTL----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFE 316 (398)
T ss_dssp TTCCCCCHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred CCCCCCCHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 4 5677888898888888752 3333444555555555555432 2222222 135566668
Q ss_pred CCCCCCChHHHHHHHHHhc---CeEEecCCCCC-----------------------CCCeEEEEecC-CCHHHHHHHHHH
Q 015890 324 LPEKHLDDFEVVRWLAHRH---GVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADR 376 (398)
Q Consensus 324 ~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~ 376 (398)
++.. .+....++++. |+.+.+|+.+. .++.||+|++. .++++++++.++
T Consensus 317 ~~~~----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 392 (398)
T 2rfv_A 317 IAGG----LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHA 392 (398)
T ss_dssp ETTH----HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred EcCC----HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Confidence 7631 22233344443 78888875431 15799999998 455555555555
Q ss_pred HH
Q 015890 377 LR 378 (398)
Q Consensus 377 l~ 378 (398)
|+
T Consensus 393 l~ 394 (398)
T 2rfv_A 393 IR 394 (398)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 151
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=1.3e-31 Score=255.89 Aligned_cols=338 Identities=16% Similarity=0.094 Sum_probs=235.8
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
+|+.++||..|. ++++ .+|++.+++.+++.+.. +... .+..+.++.+++.+.+.++.++++|++++|+++|++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~ 124 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECAL 124 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 567899998665 4443 38999999999986632 2121 344556777888887777777889999999999999
Q ss_pred HHHHHhcc--------CCCEEEEeCCCCcChhh-HHHhcCc------------EEEEeccCCCC-C--C-CCC-------
Q 015890 104 NIVLTLCD--------AGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSSK-T--L-HPD------- 151 (398)
Q Consensus 104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~~-~--~-~~d------- 151 (398)
.+++++.. ++|+|++.+|+|++... .+...|. .+..+ +.+.. . + .+|
T Consensus 125 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~d~~~~~~~ 203 (449)
T 3a8u_X 125 TAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHL-PHTLLASNAYSRGMPKEGGIA 203 (449)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEE-CCCCCGGGTTCSSSCSSSHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEe-cCCccccCccccCChHHHHHH
Confidence 99998764 67999999999988654 3443331 23333 33210 1 0 135
Q ss_pred -hHHHHHhhccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEE
Q 015890 152 -ADWLEKTLETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVV 223 (398)
Q Consensus 152 -~e~l~~~l~~~--~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i 223 (398)
+++|++.++.. ..+++|+++..+|+||. ..+++++++|.++|++||+++|+||+| +++.+...... .-...+
T Consensus 204 ~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di 283 (449)
T 3a8u_X 204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDL 283 (449)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCE
Confidence 89999998731 22466666655678997 567999999999999999999999999 65544322111 111123
Q ss_pred EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh---------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHH
Q 015890 224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 293 (398)
Q Consensus 224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 293 (398)
+ |+||.++ +| +|+||++++ +++++.+... ....+++.++++++++.++|+...+ ++..++++
T Consensus 284 ~--s~sK~l~-~G~~~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~ 355 (449)
T 3a8u_X 284 M--CIAKQVT-NGAIPMGAVIAS---TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVA 355 (449)
T ss_dssp E--EECGGGG-TTSSCCEEEEEE---HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHH
T ss_pred E--EEccccc-CCCCceEEEEEC---HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 3 8899998 57 999999998 7888888653 2234567788888888888874211 23455666
Q ss_pred HHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 294 RNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 294 ~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
++.+++++.|++++ .+....+ .++++++.++.... +..++...|+ ++||.++++ .+++||+++. .
T Consensus 356 ~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRis~~~~~ 428 (449)
T 3a8u_X 356 EVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG-----GDTLQFGPTFNS 428 (449)
T ss_dssp HHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE-----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC-----CCEEEEECCCcC
Confidence 77777777776543 2111223 36788888875321 1236777776 789999986 2789999764 7
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015890 366 VEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~ 384 (398)
+++++++++++|.++++++
T Consensus 429 t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 429 KPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 152
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=100.00 E-value=3.2e-30 Score=244.43 Aligned_cols=329 Identities=17% Similarity=0.160 Sum_probs=238.8
Q ss_pred cCCCeE--EcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAV--SLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~--~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|.+.+ +|+.|.|++++|+.+.+++.+.+... .|+. ..+..++++.+++++. .+++++++|+++++..
T Consensus 12 gg~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~------~~~v~~~~ggt~al~~ 82 (424)
T 2po3_A 12 GGPAAFDQPLLVGRPNRIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG------VRHAVATCNATAGLQL 82 (424)
T ss_dssp TCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT------SSEEEEESCHHHHHHH
T ss_pred cCCccccccccccCCCCCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHH
Confidence 444444 68889999998999999998887642 3765 6778899999999983 2589999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
++.++. +||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.++++ +++|+++ ||||...+
T Consensus 83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~---~~tG~~~~-- 153 (424)
T 2po3_A 83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFA-DIDPDTGNLDPDQVAAAVTPR--TSAVVGV---HLWGRPCA-- 153 (424)
T ss_dssp HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTSSBCHHHHGGGCCTT--EEEEEEE---CGGGCCCC--
T ss_pred HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhhCcC--CcEEEEE---CCCCCcCC--
Confidence 999985 78999999999999999999999999999 887666788999999999865 4888876 48999877
Q ss_pred HHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
+++|.++|+++|+++|+|++| + .+++...... .+ +++.|+||..+++|.|+||++.++ +++++.+......
T Consensus 154 -l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~-~d--i~~~S~sk~K~l~~~~~G~~v~~~--~~l~~~l~~~~~~ 227 (424)
T 2po3_A 154 -ADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSL-GD--AEVFSFHATKAVNAFEGGAVVTDD--ADLAARIRALHNF 227 (424)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECCTTSSSCCSSCEEEEESC--HHHHHHHHHHHBT
T ss_pred -HHHHHHHHHHcCCEEEEECccccCCeECCeecccc-cC--EEEEeCCCCCCccCCCCeEEEeCC--HHHHHHHHHHHhc
Confidence 999999999999999999999 3 3444222111 22 888999855555668999999885 5777777655432
Q ss_pred CC------------CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc----EEEEeeC
Q 015890 262 IP------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----IYLWARL 324 (398)
Q Consensus 262 ~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~----~~~~~~~ 324 (398)
.. +..+....+++... .+.+++..++..++++++.+.|++++++.+.. +.++ .++++.+
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~ 303 (424)
T 2po3_A 228 GFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI 303 (424)
T ss_dssp TTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred CccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence 11 11122222222222 23456677777788888999998875545554 3322 2344566
Q ss_pred CCC--CCChHHHHHHHHHhcCeEEecCCCCC--------------CCCe-------EEEEecC-CCHHHHHHHHHHHHHH
Q 015890 325 PEK--HLDDFEVVRWLAHRHGVVVIPGGACG--------------CRGH-------LRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 325 ~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~~~~-------iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.. ..+..++.+.| .++||.+.+..... .++. ||+++.. .+++++++++++|.++
T Consensus 304 ~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~ 382 (424)
T 2po3_A 304 DEATTGIHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC 382 (424)
T ss_dssp CHHHHSSCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred CCccchhhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 520 12566777766 58999998732100 0112 7776445 7999999999999998
Q ss_pred HHHHh
Q 015890 381 LEELV 385 (398)
Q Consensus 381 ~~~~~ 385 (398)
+++..
T Consensus 383 ~~~~~ 387 (424)
T 2po3_A 383 ATRGR 387 (424)
T ss_dssp HHHHH
T ss_pred HhhhH
Confidence 87653
No 153
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=1.4e-30 Score=246.45 Aligned_cols=354 Identities=12% Similarity=0.073 Sum_probs=242.4
Q ss_pred hccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhc
Q 015890 12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQEN 85 (398)
Q Consensus 12 ~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~ 85 (398)
...+...+..+.+......+.++|..+.+.. +|.+.+++.+.+.+.....|+ ......++++.+++.+.+.+
T Consensus 7 ~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 7 EMFDKEIFDLTNKELERQCEGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHhcCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 3444455555543333335678887776554 899999999887443222332 22333566666666777777
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHh--cCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQM--TGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
+.++++|++++| ++++..++.+++++||+|+++.|+|+++.. .+.. .+..++.+ +.+ +++.+|+++|++.++
T Consensus 85 g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~i~ 161 (417)
T 3n0l_A 85 NCKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFY-GVE-LDGRIDYEKVREIAK 161 (417)
T ss_dssp TCSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEE-CCC-TTSSCCHHHHHHHHH
T ss_pred CCCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEec-cCC-CCCCcCHHHHHHHHH
Confidence 887777887777 799999999999999999999999977544 2233 34566777 666 556789999999998
Q ss_pred -cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 161 -TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
+++ ++|++++|+| |...+ +++|.++|++||+++|+||+| +.+.+....... ..+++++|+||.+ +|
T Consensus 162 ~~~~--~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g 231 (417)
T 3n0l_A 162 KEKP--KLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTL--RG 231 (417)
T ss_dssp HHCC--SEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTT--CS
T ss_pred hcCC--eEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCcccc--CC
Confidence 454 8998887776 88888 999999999999999999997 333333222221 3458899999988 57
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG- 313 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~- 313 (398)
+|+||+++++ +++++.+....... ..+++...++++..++.. ....+.+..++..++++++.+.|++.+. .+..
T Consensus 232 ~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~ 308 (417)
T 3n0l_A 232 PRGGIIMTND--EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKF-KLVSD 308 (417)
T ss_dssp CSCEEEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGG
T ss_pred CCeeEEEECC--HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCc-eeccC
Confidence 8889999885 67777776654322 234455555555555554 3456678888888889999999988554 4443
Q ss_pred CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC------CCCeEEEEecC-----CCHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~ 382 (398)
+..++++|+.++....+..++... ++++||.+.++..+. .++.+|+++.. .+++++++++++|.++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 309 GTDNHLVLMSFLDREFSGKDADLA-LGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp SCSSSEEEEECTTSSSCHHHHHHH-HHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcccCCCCHHHHHHH-HHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 334678888886443355566654 468999998765332 23579999753 357999999999999886
Q ss_pred HH
Q 015890 383 EL 384 (398)
Q Consensus 383 ~~ 384 (398)
+.
T Consensus 388 ~~ 389 (417)
T 3n0l_A 388 DV 389 (417)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 154
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=7.5e-31 Score=251.20 Aligned_cols=334 Identities=11% Similarity=0.060 Sum_probs=231.5
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
|..++||..+.++.+.++.+++++.. . ...|.+..+..++++++++++. .+++++++|+++|+..++.+
T Consensus 41 ~~~ylD~~~~~~~~~~~~~~~~a~~~----~-~~~y~~~~~~~~l~~~la~~~~------~~~~~~~~~gt~a~~~al~~ 109 (456)
T 2ez2_A 41 KDIYIDLLTDSGTNAMSDKQWAGMMM----G-DEAYAGSENFYHLERTVQELFG------FKHIVPTHQGRGAENLLSQL 109 (456)
T ss_dssp GGCSEECSCSSSCCCCCHHHHHHHTT----C-CCCSSSCHHHHHHHHHHHHHHC------CSEEEEESSHHHHHHHHHHH
T ss_pred ccceeeeccccCCccCCHHHHHHhhc----c-hhhcccChhHHHHHHHHHHHhC------CCcEEEeCCcHHHHHHHHHH
Confidence 34466666555555567788877752 1 2357677778899999999883 34799999999999999999
Q ss_pred hccCCCEEEEeCCCC-cChhhHHHhcCcEEEEeccCCCC---------CCCCChHHHHHhhccCC--CCeEEEEeCCCC-
Q 015890 109 LCDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETKP--TPKLVSVVNPGN- 175 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~e~l~~~l~~~~--~~~~v~i~~p~n- 175 (398)
++++|| +++.|+| ..+...++..|.+++.+ +.+++ ++.+|+++|++.+++++ .+++|++++|+|
T Consensus 110 l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ 186 (456)
T 2ez2_A 110 AIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDI-VRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNL 186 (456)
T ss_dssp HCCTTC--EEEESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTT
T ss_pred hCCCCC--EeccccccchhHHHHHHcCCEEEEe-cccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCC
Confidence 999999 7889999 56678889999999988 76532 35789999999997542 248899999998
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-----------cCCCccc-----cccCCcEEEEcccccccCCCcce
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-----------YDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWR 238 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-----------~~~~~~~-----~~~~~~~i~~~s~sK~~~~~G~r 238 (398)
|||.+++.+++++|+++|++||+++|+||+| ++ +.+.... .....++++ .|++|..+ +| +
T Consensus 187 ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~-~S~kk~~~-~~-~ 263 (456)
T 2ez2_A 187 AGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT-MSGKKDCL-VN-I 263 (456)
T ss_dssp TTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE-EETTTTTC-CS-S
T ss_pred CCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE-EeCcccCC-CC-c
Confidence 9999999999999999999999999999999 53 3443211 112233444 47788765 56 7
Q ss_pred eEEEEccCCcHHHHHHHHHhhccC-----CCCcchHHHHH-HHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 239 VGYIAYPSEVEGFATQLLKVQDNI-----PICASIISQHL-ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 239 ~G~i~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
+||++.++ +++++.+....... ..+.+.....+ +...++... ++..++..++.+++.+.|++.+. .+.
T Consensus 264 gG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~-~~~ 337 (456)
T 2ez2_A 264 GGFLCMND--DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAGV-PIV 337 (456)
T ss_dssp CEEEEESC--HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTC-CBC
T ss_pred eeEEEECC--HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCCC-ccc
Confidence 89999843 67877766543211 11223233333 333332211 23344445556677777766543 565
Q ss_pred cCCccEEEEeeCCC--CCCChHHH-----HHHHHHhcCeEEec-CCCC------------CCCCeEEEEecC--CCHHHH
Q 015890 313 GGEGAIYLWARLPE--KHLDDFEV-----VRWLAHRHGVVVIP-GGAC------------GCRGHLRISFGG--LVEDDC 370 (398)
Q Consensus 313 ~~~~~~~~~~~~~~--~~~~~~~~-----~~~ll~~~gi~v~~-g~~~------------~~~~~iRi~~~~--~~~~~~ 370 (398)
.+.+++++|+.+.. ...+..++ +.+|++++||.+.+ |..| ...++|||+++. .+++++
T Consensus 338 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i 417 (456)
T 2ez2_A 338 EPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHM 417 (456)
T ss_dssp SSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHH
T ss_pred cCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHH
Confidence 67678888887631 11233344 66665688998765 4322 124789999985 489999
Q ss_pred HHHHHHHHHHHHHHh
Q 015890 371 KAAADRLRRGLEELV 385 (398)
Q Consensus 371 ~~~~~~l~~~~~~~~ 385 (398)
++++++|.+++++..
T Consensus 418 ~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 418 DVVADGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999987754
No 155
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.98 E-value=8.5e-32 Score=255.63 Aligned_cols=336 Identities=13% Similarity=0.081 Sum_probs=229.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ++++ .||++.+++.+++.+.....| +.....++++.+++++ + ..+++++++|++++++
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~-~~~~v~~~~~Gsea~~ 123 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERV----P-SIEIVRMVNSGTEATM 123 (429)
T ss_dssp TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHS----T-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhC----C-CCCEEEEeCChHHHHH
Confidence 3578899999876 4555 589999999998876433333 4545556666666654 3 4789999999999999
Q ss_pred HHHHHhcc--CCCEEEEeCCCCcChhhHHHhc-CcEEEEeccCCCC-CCC------------CChHHHHHhhccC-CCCe
Q 015890 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GVTHILVGPCSSK-TLH------------PDADWLEKTLETK-PTPK 166 (398)
Q Consensus 104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~------------~d~e~l~~~l~~~-~~~~ 166 (398)
.+++.+.. ++++|++.+|+|+++...+... |.....+ ..+.. +.. -|+++|++.++.. ..++
T Consensus 124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 202 (429)
T 3k28_A 124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATL-GLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIA 202 (429)
T ss_dssp HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC------CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCccccc-CCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEE
Confidence 99988764 5689999999998766443222 2211111 11111 110 1789999998731 1246
Q ss_pred EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890 167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243 (398)
Q Consensus 167 ~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~ 243 (398)
+|+++.++|++|.+. +++++++|.++|++||+++|+||+| + ..+........+....+.++||.++ +|+|+||++
T Consensus 203 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~ 280 (429)
T 3k28_A 203 CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYG 280 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TTSCCEEEE
T ss_pred EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhc-CCCCeEEEE
Confidence 777776667777655 6888999999999999999999999 5 4442221111111222457899998 699999999
Q ss_pred ccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCccccCCc
Q 015890 244 YPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEG 316 (398)
Q Consensus 244 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~ 316 (398)
++ +++++.+.... ...+++.++++++++.++++..+ ++..+.++++++++.+.|++ .+.+....+.
T Consensus 281 ~~---~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~- 353 (429)
T 3k28_A 281 GK---AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRA- 353 (429)
T ss_dssp EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-
T ss_pred Ec---HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEee-
Confidence 98 78877765422 33467889999999999998643 45555566666666555543 4554444455
Q ss_pred cEEEEeeCCCCCC------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 317 ~~~~~~~~~~~~~------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~ 384 (398)
++++++.+..... ...+++..++ ++||.+.|+. .+.+|+++. .+++++++++++|.++++++
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 354 GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ----FEGLFLSTV-HSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred ccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC----CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence 6666666643211 1256667665 7899999863 467888776 48999999999999998764
No 156
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.98 E-value=6.1e-30 Score=244.39 Aligned_cols=356 Identities=12% Similarity=-0.009 Sum_probs=253.1
Q ss_pred hHHHHHHHHH-HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc----
Q 015890 17 PIMVQIQELV-RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS---- 91 (398)
Q Consensus 17 ~~~~~~~~~~-~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~---- 91 (398)
..++.+.+.. .++....+.....+ ...+|.+.+++.+++... ...|...++..++++.+.+++.+++|.+.++
T Consensus 27 ~v~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~ 104 (452)
T 2dgk_A 27 VAFQIINDELYLDGNARQNLATFCQ-TWDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQA 104 (452)
T ss_dssp HHHHHHHHHGGGSCCCTTBCSCCSC-CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHhcCCCCCccCCCCeeC-CCchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCC
Confidence 3455555554 34443444444333 345689999998887653 3446566777889999999999999987665
Q ss_pred -EEEecChHHHHHHHHHHhcc--------CC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 92 -VMVTAGANQAFVNIVLTLCD--------AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 92 -v~~~~g~t~a~~~~~~~l~~--------~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
+++++|+|+++..++.++.. +| ++|+++. +|..+...++..|++++.+ +.+++++.+|+++|++
T Consensus 105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~ 182 (452)
T 2dgk_A 105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIE 182 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHH
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEE-ecCCCCCeECHHHHHH
Confidence 99999999999999988764 55 5899999 9999999999999999999 8765457899999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEeece--ecc---CCC-ccccccCCcEEEE
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTY--FMY---DGR-KHCCVEGDHVVNL 225 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~------~~~livDe~~--~~~---~~~-~~~~~~~~~~i~~ 225 (398)
++++++ ++|++++|+||||.+.+ +++|.++|+++ |+++++|++| +.. .+. .......+.+.++
T Consensus 183 ~i~~~t--~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 257 (452)
T 2dgk_A 183 ACDENT--IGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSIS 257 (452)
T ss_dssp HCCTTE--EEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEE
T ss_pred HHhhCC--EEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEE
Confidence 998765 89999999999999998 89999999995 9999999999 221 221 1111122445678
Q ss_pred cccccccCCCcceeEEEEccCCcHHHH-HHHHHhhccC---------CCCc---chHHHHHHHHHhcCCchHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFA-TQLLKVQDNI---------PICA---SIISQHLALYSLQTGPEWVTERVKDL 292 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~-~~l~~~~~~~---------~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~ 292 (398)
.|.+|++ .+|+++|++++++ +.++ +.+....... .++. ....++++...+. .+.+++..++.
T Consensus 258 ~~~hK~~-~~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--~~g~~~~~~~~ 332 (452)
T 2dgk_A 258 ASGHKFG-LAPLGCGWVIWRD--EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--REGYTKVQNAS 332 (452)
T ss_dssp EETTTTT-CCCSSCEEEEESS--GGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred ECccccc-CCCCCeEEEEEcC--HHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--HHHHHHHHHHH
Confidence 8999955 5788999999875 3322 3221101100 1121 3334444444442 45678888899
Q ss_pred HHHHHHHHHHhccCCCCccccC----CccEEEEeeCCCCC---CChHHHHHHHHHhcCeEEecCCC---CCCCCeEEEEe
Q 015890 293 VRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISF 362 (398)
Q Consensus 293 ~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~ 362 (398)
.++++++.+.|++.+.+.+..+ ...+++.+.++... .+..++.+.|. ++||.++.... ....+++|+++
T Consensus 333 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~ 411 (452)
T 2dgk_A 333 YQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMC 411 (452)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEe
Confidence 9999999999999876566543 33566767765321 13477888775 78996543211 12345899999
Q ss_pred cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890 363 GG-LVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 363 ~~-~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+. .++++++++++.|+++++.+.+.
T Consensus 412 ~~~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 412 RRGFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 98 78899999999999998887654
No 157
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.98 E-value=5.9e-31 Score=252.67 Aligned_cols=324 Identities=15% Similarity=0.131 Sum_probs=224.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc----CCCE---EEE
Q 015890 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AGDS---VVM 118 (398)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~----~gd~---Vl~ 118 (398)
+.+.+++.+.+... ...|.+..+..++++.+++++. .+++++|+|+++|++.++.++++ +||+ |++
T Consensus 55 ~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv 127 (467)
T 1ax4_A 55 NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELFN------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFI 127 (467)
T ss_dssp CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHHC------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHcC------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEE
Confidence 67777777766543 3467677778889999999883 36899999999999999999988 9998 999
Q ss_pred eCCCCcChhhHHHhcCcEEEEeccCCC---------CCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHHH
Q 015890 119 FAPYYFNSYMSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERLL 186 (398)
Q Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt-G~~~~~~~l 186 (398)
+.+.|..+...+...|.+++.+ +.+. .++.+|+++|++.+++. ..+++|++++|+||+ |.+++.+++
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l 206 (467)
T 1ax4_A 128 SNFHFDTTAAHVELNGCKAINI-VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNL 206 (467)
T ss_dssp ESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred eccccchhhHHHhccCCceecc-cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHH
Confidence 8555556677788889888776 4321 13468999999999742 125999999999999 899999999
Q ss_pred HHHHHHHHHcCCEEEEeece-e-----------ccCCCcccccc----CCcEEEEcccccccCCC-cceeEEEEccCCcH
Q 015890 187 KRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSEVE 249 (398)
Q Consensus 187 ~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~~~----~~~~i~~~s~sK~~~~~-G~r~G~i~~~~~~~ 249 (398)
++|+++|++||+++|+|+++ + .+.+....... ...++++.|+||.+|++ | |+++.++ +
T Consensus 207 ~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d--~ 281 (467)
T 1ax4_A 207 KEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRD--N 281 (467)
T ss_dssp HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESS--C
T ss_pred HHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCC--H
Confidence 99999999999999999987 4 34343221110 01125668999999765 3 6777664 4
Q ss_pred -HHHHHHHHhhcc----CCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890 250 -GFATQLLKVQDN----IPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323 (398)
Q Consensus 250 -~~~~~l~~~~~~----~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 323 (398)
++++.+...... ..+ +.+...+.++..+++...+ ++..+...++++.+.+.|++.+ +.+..+.+++++|+.
T Consensus 282 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~ 358 (467)
T 1ax4_A 282 EEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREAG-IPIQYPTGGHAVFVD 358 (467)
T ss_dssp HHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTT-CCBCSSCCSSEEEEE
T ss_pred HHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhCC-CCcccCCCceEEEEe
Confidence 666666543321 112 2333333433334543211 1122233355667777776643 355567778899988
Q ss_pred -------CCCCCCChHHHHHHHHHhcCeEEec-CCCC-C-----------CCCeEEEEecC--CCHHHHHHHHHHHHHHH
Q 015890 324 -------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-G-----------CRGHLRISFGG--LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 324 -------~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~-~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~~~~ 381 (398)
++....+..+++.+|+.++||.+.+ |..+ + ..+++||+++. .+++++++++++|.+++
T Consensus 359 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 438 (467)
T 1ax4_A 359 CKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLK 438 (467)
T ss_dssp STTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred hhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 3321124567888775689999998 5432 1 13789999983 68999999999999998
Q ss_pred HHHh
Q 015890 382 EELV 385 (398)
Q Consensus 382 ~~~~ 385 (398)
++..
T Consensus 439 ~~~~ 442 (467)
T 1ax4_A 439 EKFA 442 (467)
T ss_dssp HHHT
T ss_pred Hhhh
Confidence 8753
No 158
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2e-30 Score=250.88 Aligned_cols=326 Identities=11% Similarity=0.020 Sum_probs=243.4
Q ss_pred CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc-----CC
Q 015890 44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD-----AG 113 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~-----~g 113 (398)
.++.+.+++.+.+... ....|...++..++++.+.+++.+.+|.+ ++++++++|+++++..++.++++ +|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g 155 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRG 155 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 4577777777766431 23345556677889999999999999987 67899999999999999999864 56
Q ss_pred ---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 114 ---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 114 ---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
|+|+++.++|.++...++..|++++.+ +.+++++.+|+++|++++++++ ++|++++|+||||.+.+ +++|.
T Consensus 156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~---l~~i~ 229 (497)
T 3mc6_A 156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHV-ELDPTTYQVDLGKVKKFINKNT--VLLVGSAPNFPHGIADD---IEGLG 229 (497)
T ss_dssp CSSCEEEEETTSCHHHHHHHHHSCCEEEEE-CBCTTTCSBCTTTTGGGCCSSE--EEEEEETTCTTTCCCCS---CTTTT
T ss_pred CCCceEEEeCCccHHHHHHHHHcCCeEEEE-ecCcccCcCCHHHHHHHHhhCC--EEEEEECCCCCCCcCCC---HHHHH
Confidence 899999999999999999999999999 8776456889999999998764 99999999999999999 88999
Q ss_pred HHHHHcCCEEEEeece--ec--cC---C---C-ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890 191 DLCKAAGSWLVVDNTY--FM--YD---G---R-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 191 ~l~~~~~~~livDe~~--~~--~~---~---~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
++|+++|+++|+|++| +. +. + . +......+.++++.|++|.++ +|.++|++++++ +.+.......
T Consensus 230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~~ 305 (497)
T 3mc6_A 230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRN---SDLRMHQYYV 305 (497)
T ss_dssp THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSS---HHHHTTTSCC
T ss_pred HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcC-CCCCceeEEecC---HHHHhhhhcc
Confidence 9999999999999999 22 11 1 1 112222345688889999874 678899999884 3333221110
Q ss_pred -ccC----------CCCcc---hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeC
Q 015890 260 -DNI----------PICAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARL 324 (398)
Q Consensus 260 -~~~----------~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~ 324 (398)
..+ ..+.+ ..+++++...+. ...+++..++..++++++.+.|++ ++++.+..+..++++++..
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~ 383 (497)
T 3mc6_A 306 NPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSS 383 (497)
T ss_dssp BTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEEC
T ss_pred cccccCCCcCCcCcccCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeC
Confidence 000 00111 233444444443 355678888889999999999998 5666766544455666665
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+. .+..++.+.|. ++||.+.++. .+..+|++++..+.+++++++++|.++++++.+.
T Consensus 384 ~~--~~~~~l~~~L~-~~Gi~v~~~~---~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 384 KT--LNIHELSDRLS-KKGWHFNALQ---KPVALHMAFTRLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp TT--TTHHHHHHHHH-TTTCBCEECC---SSCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred CC--CCHHHHHHHHH-hCCEEEecCC---CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 42 35778888775 7899987754 3457899988778899999999999999887653
No 159
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.98 E-value=2e-31 Score=253.83 Aligned_cols=327 Identities=17% Similarity=0.128 Sum_probs=229.8
Q ss_pred CCeEEcCCc-cCCCCCcHHHHHHHHHh---hcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 30 KNAVSLAQG-VVYWQPPKMAMEKVKEL---VWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 30 ~~~~~l~~g-~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
.+++.|+.| ++..+.|+.+.++.... ......+.|+ ..+.+ .++++++++.++++.+ ++++++|+++++..+
T Consensus 89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~ 164 (464)
T 1ibj_A 89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKAD--RAFCFTSGMAALSAV 164 (464)
T ss_dssp HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH
T ss_pred CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHH
Confidence 457888887 67777788887776543 1122345675 34444 7888999888888754 777788888999988
Q ss_pred HHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890 106 VLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 106 ~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~ 181 (398)
+. ++++||+|+++.|+|+++... ++..|.+++.+ +.+ |++++++.++++ +++|++++|+||||.++
T Consensus 165 l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~------d~~~l~~~i~~~--tk~v~l~~p~NptG~v~ 234 (464)
T 1ibj_A 165 TH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NTT------KLDEVAAAIGPQ--TKLVWLESPTNPRQQIS 234 (464)
T ss_dssp HT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CTT------SHHHHHHHCCSS--EEEEEECSSCTTTCCCC
T ss_pred HH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHHhccC--ceEEEEeCCCCCCCEee
Confidence 85 778999999999999888653 46679999988 553 789999999865 49999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhh
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQ 259 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~ 259 (398)
+ +++|+++|+++|+++|+||+| .+... .....+.++++.|+||.++. +|+++||+++++ +++++.+....
T Consensus 235 ~---l~~i~~la~~~gi~livDea~~~g~~~---~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~--~~l~~~l~~~~ 306 (464)
T 1ibj_A 235 D---IRKISEMAHAQGALVLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQ 306 (464)
T ss_dssp C---HHHHHHHHHTTTCEEEEECTTTCTTTC---CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECS--HHHHHHHHHHH
T ss_pred c---HHHHHHHHHHcCCEEEEECCCcccccC---ChhhcCCEEEEECCcccccCCCCCcEEEEEECh--HHHHHHHHHHH
Confidence 8 999999999999999999999 43211 11123567999999999864 488999999985 47778777666
Q ss_pred ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH----------HHhccCCCCccccCC---ccEEEEeeCCC
Q 015890 260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR----------EALSPLGEGAVKGGE---GAIYLWARLPE 326 (398)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----------~~l~~~~~~~~~~~~---~~~~~~~~~~~ 326 (398)
.....+.+++.++++..+++.....+++..+......+.+. +.|++++.+.+..++ .+.++++.++.
T Consensus 307 ~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~ 386 (464)
T 1ibj_A 307 NSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS 386 (464)
T ss_dssp HHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred HhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence 44556677888888888876422222222222222223332 223333333444333 24577778742
Q ss_pred CCCChHHHHHHHHHhcCeEEecCC------------CC----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 327 KHLDDFEVVRWLAHRHGVVVIPGG------------AC----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 327 ~~~~~~~~~~~ll~~~gi~v~~g~------------~~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
......+++.| +..||.++.|. .+ + .+++||++++. +++++++++|++++++
T Consensus 387 -~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 387 -VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp -HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 11123455554 35788888875 11 1 15789999996 8899999999988764
No 160
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.98 E-value=3.2e-30 Score=242.07 Aligned_cols=319 Identities=15% Similarity=0.102 Sum_probs=235.9
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL- 109 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l- 109 (398)
++++|+. +. .|+++++++.+.+.+. .|.+..+..++++.+++++ +. +++++++|+++|+..++.++
T Consensus 9 ~~i~~~~--p~--~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~al~~~~~~~~ 75 (393)
T 1mdo_A 9 DFLPFSR--PA--MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLT----GN--QYAVAVSSATAGMHIALMALG 75 (393)
T ss_dssp CCBCSCC--CC--CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTT
T ss_pred cccccCC--CC--CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHh----CC--CcEEEecChHHHHHHHHHHcC
Confidence 4677775 44 4578889998887653 2335567788999999988 33 47999999999999999999
Q ss_pred ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.++++ +++|+++ ||||...+ +++|
T Consensus 76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~--~~~v~~~---~~~G~~~~---~~~i 146 (393)
T 1mdo_A 76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQ--TKAIIPV---HYAGAPAD---LDAI 146 (393)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTT--EEEECCB---CGGGCCCC---HHHH
T ss_pred CCCCCEEEeCCCccHhHHHHHHHCCCEEEEE-eccCCcCCCCHHHHHHhcCCC--ceEEEEe---CCCCCcCC---HHHH
Confidence 8999999999999999999999999999999 887766789999999999864 4888875 48999988 9999
Q ss_pred HHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015890 190 SDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP- 263 (398)
Q Consensus 190 ~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~- 263 (398)
.++|+++|+++|+|++| .+ +.+.+... .++++.|+| |.++ |.++||++.++ +++++.+........
T Consensus 147 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~----~d~~~~S~~k~K~l~--~~~~g~~~~~~--~~~~~~l~~~~~~~~~ 218 (393)
T 1mdo_A 147 YALGERYGIPVIEDAAHATGTSYKGRHIGA----RGTAIFSFHAIKNIT--CAEGGIVVTDN--PQFADKLRSLKFHGLG 218 (393)
T ss_dssp HHHHHHHTCCBCEECTTCTTCEETTEETTS----SSEEEEECCTTSSSC--SSSCEEEEESC--HHHHHHHHHHTBTTEE
T ss_pred HHHHHHcCCeEEEECccccCCeECCeecCC----CCeEEEeCCCCCccc--cccceEEEeCC--HHHHHHHHHHHhcCCc
Confidence 99999999999999999 32 33322111 568889999 7664 45899999864 677777765432110
Q ss_pred -----------------------CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-C-----
Q 015890 264 -----------------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G----- 314 (398)
Q Consensus 264 -----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~----- 314 (398)
+..+....+++...++. +++..++.+++++++.+.|++.+ +++.. +
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~ 293 (393)
T 1mdo_A 219 VDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHI 293 (393)
T ss_dssp CC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEE
T ss_pred ccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCC
Confidence 11244444443444432 45566666778888889998877 45432 2
Q ss_pred CccEEEEeeCCCC--CCChHHHHHHHHHhcCeEEecCCCC--------------CC-------CCeEEEEecC-CCHHHH
Q 015890 315 EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGAC--------------GC-------RGHLRISFGG-LVEDDC 370 (398)
Q Consensus 315 ~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~g~~~--------------~~-------~~~iRi~~~~-~~~~~~ 370 (398)
.+++++++.++.. ..+..++.+.|. ++||.++++..+ .. ...+|++++. .+++|+
T Consensus 294 ~~~~~~~v~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i 372 (393)
T 1mdo_A 294 HAWHLFIIRVDEARCGITRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDF 372 (393)
T ss_dssp CCCSCEEEECCHHHHSSCHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHH
T ss_pred ceeEEEEEEecccccccCHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHH
Confidence 3345788888630 135777888775 789999988754 11 2479999986 789999
Q ss_pred HHHHHHHHHHHHHHh
Q 015890 371 KAAADRLRRGLEELV 385 (398)
Q Consensus 371 ~~~~~~l~~~~~~~~ 385 (398)
++++++|+++++...
T Consensus 373 ~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 373 DRVITALHQIAGQGS 387 (393)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999998876543
No 161
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.98 E-value=9.3e-30 Score=241.30 Aligned_cols=359 Identities=16% Similarity=0.136 Sum_probs=231.6
Q ss_pred hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-----CC-CCcHHHHHHHHHHH
Q 015890 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-----AD-EGLPELRDALVKKL 81 (398)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~-~~~~~~~~~l~~~l 81 (398)
+.++...+........+......+.++|..+.+.. ||.+++++.+.+.+....+|+ .. .....+++...+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (425)
T 3ecd_A 10 SQSLAERDASVRGAILKELERQQSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERV 87 (425)
T ss_dssp HCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHH
Confidence 44444444444444433333334678887776654 899999999988542212221 11 11123333333555
Q ss_pred hhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC---hhhHHHhcCc--EEEEeccCCCCCCCCChHHHH
Q 015890 82 NQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGV--THILVGPCSSKTLHPDADWLE 156 (398)
Q Consensus 82 ~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~e~l~ 156 (398)
.+.++.+.. .++++|+++++..++.+++++||+|+++.|+|++ +.......|. +++.+ +.+.+++.+|+++|+
T Consensus 88 ~~~~~~~~~-~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~ 165 (425)
T 3ecd_A 88 KRLFNAGHA-NVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQY-GVSRDTMLIDYDQVE 165 (425)
T ss_dssp HHHHTCSEE-ECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEE-CCCTTTSSCCHHHHH
T ss_pred HHHhCCCCc-eeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeec-CCCcccCccCHHHHH
Confidence 555566542 3458888899999999999999999999999987 2222223343 66666 666566788999999
Q ss_pred Hhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEccccccc
Q 015890 157 KTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 157 ~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~ 232 (398)
+.++ ++ +++|++++|+|| ...+ +++|.++|++||+++|+||+| +.+.+........ .+++++|+||++
T Consensus 166 ~~i~~~~--~~~v~~~~~~~~--~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-~di~~~s~sK~l 237 (425)
T 3ecd_A 166 ALAQQHK--PSLIIAGFSAYP--RKLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-AHVVTSTTHKTL 237 (425)
T ss_dssp HHHHHHC--CSEEEEECSCCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSGGG
T ss_pred HHHhhcC--CcEEEEccccCC--CcCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-CcEEEecCCccc
Confidence 9997 44 499999989886 4455 899999999999999999996 3344433222221 348899999998
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
+|+|+||++.++ +.+.+.+....... ..+.+...+.++..++.. ..+++++..+++.++++++.+.|++.+. .
T Consensus 238 --~g~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~ 312 (425)
T 3ecd_A 238 --RGPRGGFVLTND--EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-D 312 (425)
T ss_dssp --CCCSCEEEEESC--HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-E
T ss_pred --CCCCcEEEEeCC--HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-e
Confidence 577899999885 56767666544322 223445455555545433 3456778888889999999999988665 5
Q ss_pred cccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHH
Q 015890 311 VKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLR 378 (398)
Q Consensus 311 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~ 378 (398)
+..+ ..++++|+.++....+...+...| +++||.+.++..+ ..++.+|++++. .+++++++++++|.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~ 391 (425)
T 3ecd_A 313 LVTGGTDNHLLLVDLRPKGLKGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLIL 391 (425)
T ss_dssp EGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHH
T ss_pred eccCCCCceEEEEEeCCCCCCHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHH
Confidence 5443 357888888864333455555555 6889999943321 124689999443 34799999999999
Q ss_pred HHHHHH
Q 015890 379 RGLEEL 384 (398)
Q Consensus 379 ~~~~~~ 384 (398)
+++++.
T Consensus 392 ~~l~~~ 397 (425)
T 3ecd_A 392 EVFEAL 397 (425)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 998876
No 162
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=1.5e-29 Score=239.35 Aligned_cols=326 Identities=14% Similarity=0.130 Sum_probs=230.8
Q ss_pred CccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCC
Q 015890 37 QGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGD 114 (398)
Q Consensus 37 ~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd 114 (398)
.|.+..+ .++++++++.+.+.+.....|++..|..++++.+++.+.+.++.+ ++++++|+++++..++.++ +++||
T Consensus 6 ~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd 83 (418)
T 2c81_A 6 DHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD 83 (418)
T ss_dssp --CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 3455554 479999999998876433347666676666666666666666765 5677888899999999999 89999
Q ss_pred EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (398)
Q Consensus 115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~ 194 (398)
+|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.++++ +++|+++ ||||...+ +++|.++|+
T Consensus 84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~---~~~G~~~~---~~~i~~~~~ 154 (418)
T 2c81_A 84 EVIVPSLTWIATATAVLNVNALPVFV-DVEADTYCIDPQLIKSAITDK--TKAIIPV---HLFGSMAN---MDEINEIAQ 154 (418)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHGGGCCTT--EEEECCB---CCTTCCCC---HHHHHHHHH
T ss_pred EEEECCCccHhHHHHHHHcCCEEEEE-ecCCCCCCcCHHHHHHhhCCC--CeEEEEe---CCcCCccc---HHHHHHHHH
Confidence 99999999999999999999999999 887656789999999999865 4888764 58999887 999999999
Q ss_pred HcCCEEEEeece--ec-cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC------
Q 015890 195 AAGSWLVVDNTY--FM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP------ 263 (398)
Q Consensus 195 ~~~~~livDe~~--~~-~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~------ 263 (398)
++|+++|+|++| +. +++...... .+ +++.|+ ||.+++ | ++||++.++ +++++.+........
T Consensus 155 ~~~~~li~D~a~~~~~~~~~~~~~~~-~~--~~~~s~s~~K~~~~-g-~~g~~~~~~--~~l~~~~~~~~~~~~~~~~~~ 227 (418)
T 2c81_A 155 EHNLFVIEDCAQSHGSVWNNQRAGTI-GD--IGAFSCQQGKVLTA-G-EGGIIVTKN--PRLFELIQQLRADSRVYCDDS 227 (418)
T ss_dssp HTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECCTTSSSCS-S-SCEEEEESC--HHHHHHHHHHHBTTEEECSCG
T ss_pred HCCCEEEEECcccccCccCCEecccc-cc--eEEEeccCCcccCC-C-CeEEEEECC--HHHHHHHHHHHHhCccccccc
Confidence 999999999999 32 444222211 22 556666 999985 7 999999864 677777765432110
Q ss_pred ------CC--c-----------chHHHHHH-HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCc-cE---
Q 015890 264 ------IC--A-----------SIISQHLA-LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-AI--- 318 (398)
Q Consensus 264 ------~~--~-----------~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~-~~--- 318 (398)
+. . -...++++ ...++ .+++..++.+++++++.+.|++++++.+. .+.+ +.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 303 (418)
T 2c81_A 228 SELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY 303 (418)
T ss_dssp GGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred cccccchhhccccccccCcCCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence 11 0 01122221 12222 25666677777888899999887655665 3443 22
Q ss_pred -EEEeeCCC---CCCChHHHHHHHHHhcCeE---EecCCCCC---------------------------C---------C
Q 015890 319 -YLWARLPE---KHLDDFEVVRWLAHRHGVV---VIPGGACG---------------------------C---------R 355 (398)
Q Consensus 319 -~~~~~~~~---~~~~~~~~~~~ll~~~gi~---v~~g~~~~---------------------------~---------~ 355 (398)
.+.+.++. ...+..++.+.|.+++||. +.++..+. . .
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 22256653 1236778888886433999 88875220 0 1
Q ss_pred CeEEEEecC-C-CHHHHHHHHHHHHHHHHHH
Q 015890 356 GHLRISFGG-L-VEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 356 ~~iRi~~~~-~-~~~~~~~~~~~l~~~~~~~ 384 (398)
+.||++++. . +++|++++++.|+++++++
T Consensus 384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 384 QSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 479999987 7 8999999999999888754
No 163
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.97 E-value=2e-30 Score=246.06 Aligned_cols=332 Identities=14% Similarity=0.100 Sum_probs=227.3
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ++++ .+|++.+++.+++.+... |.. ..+.+.++++++.+.++ ++++|++++|++++++
T Consensus 49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~ 122 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACM 122 (427)
T ss_dssp TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 4678899999886 4454 599999999999876422 322 35677777777777766 6789999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-E-------------------EEEeccCCCCCCCCChHHHHHhhcc
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-T-------------------HILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-~-------------------~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
.+++... ..+++|++..|+|+++...+...+. . +..+ +. -|+++|++.+++
T Consensus 123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~ 195 (427)
T 3fq8_A 123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-PY------NDLEAVKALFAE 195 (427)
T ss_dssp HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE-ET------TCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec-CC------CCHHHHHHHHHh
Confidence 9996543 3457999999999886543322211 1 1111 11 189999999975
Q ss_pred C-CCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc
Q 015890 162 K-PTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 162 ~-~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 237 (398)
. ..+++|+++.++|++|.+.+ ++++++|.++|++||+++|+||+| + ..+........+....+.|+||.++ +|+
T Consensus 196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~ 273 (427)
T 3fq8_A 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIG-GGL 273 (427)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGG-TTS
T ss_pred CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhh-CCc
Confidence 3 22578888877888887665 666999999999999999999999 5 3332221111122222458899998 899
Q ss_pred eeEEEEccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890 238 RVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK 312 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 312 (398)
|+||++++ +++++.+... ....+++.++++++++.++++. .++..++..+.....++.+.+.+...+.....
T Consensus 274 ~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 350 (427)
T 3fq8_A 274 PVGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACG 350 (427)
T ss_dssp SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred ceEEEEEc---HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 99999998 7888776542 1334567789999999988864 12344444444444455555555445543333
Q ss_pred cCCccEEEEeeCCCCCCC------------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890 313 GGEGAIYLWARLPEKHLD------------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380 (398)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 380 (398)
.+. ++++++.+...... ..++...++ ++||.++++.. ..+|+++. .+++++++++++|.++
T Consensus 351 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~----~r~~~~~~-~t~e~i~~~l~~l~~~ 423 (427)
T 3fq8_A 351 GQV-SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAARTV 423 (427)
T ss_dssp EEE-TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHHHH
T ss_pred EEe-eeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC----CCEEeeCc-CCHHHHHHHHHHHHHH
Confidence 333 77788887543211 246777665 78999998752 34555544 5899999999999998
Q ss_pred HHH
Q 015890 381 LEE 383 (398)
Q Consensus 381 ~~~ 383 (398)
+++
T Consensus 424 l~~ 426 (427)
T 3fq8_A 424 MSA 426 (427)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 164
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=1.4e-30 Score=246.30 Aligned_cols=329 Identities=12% Similarity=0.069 Sum_probs=234.7
Q ss_pred HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (398)
Q Consensus 26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a 101 (398)
+...++.+.|+.+.+. +.|+.+.+++.+.+.+.. ..+.. ..+..+..+.+.+.+.++++.++++|++++|++++
T Consensus 23 f~~~~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a 100 (416)
T 1qz9_A 23 FALPEGVIYLDGNSLG-ARPVAALARAQAVIAEEW-GNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSIN 100 (416)
T ss_dssp BCCCTTCEECCTTTSC-CCBTTHHHHHHHHHHTCC-CCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHH
T ss_pred CCCCCCeEeecCCCcC-CCcHHHHHHHHHHHHHHH-hccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHH
Confidence 3333567888877766 568899999999886521 11110 11333455566666666678888899999999999
Q ss_pred HHHHHHHhc------cCCCEEEEe-CCCCcChhhH----HHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 102 FVNIVLTLC------DAGDSVVMF-APYYFNSYMS----FQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 102 ~~~~~~~l~------~~gd~Vl~~-~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
+..++.+++ ++||+|++. .++|+.+... .+.. |++++.+ +. +++|++.++++ +++|
T Consensus 101 l~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--------~~~l~~~i~~~--~~~v 169 (416)
T 1qz9_A 101 LFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLV-DS--------PEELPQAIDQD--TAVV 169 (416)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEE-SS--------GGGHHHHCSTT--EEEE
T ss_pred HHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEe-Cc--------HHHHHHHhCCC--ceEE
Confidence 998888876 889875554 4566544433 2333 8898888 54 78899998764 5999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccC
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPS 246 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~ 246 (398)
++++|+||||.+.+ +++|.++|+++|+++|+|++| ++..... ....+.++++.|++|+++ +|.++ |+++++
T Consensus 170 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~~K~l~-~g~~~~g~l~~~- 242 (416)
T 1qz9_A 170 MLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAVPVD--LHQAGADYAIGCTYKYLN-GGPGSQAFVWVS- 242 (416)
T ss_dssp EEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCCC--HHHHTCSEEEECSSSTTC-CCTTCCCEEEEC-
T ss_pred EEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccCcCCC--hhhcCCCEEEecCcccCC-CCCCCeEEEEEC-
Confidence 99999999999999 899999999999999999999 5432211 111234588899999984 67777 999998
Q ss_pred CcHHHHHHHHHhh-----------------------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH
Q 015890 247 EVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 247 ~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 302 (398)
+++++.+.... ....++.+...+.++.++++.. ..++++..+++.++++++.+.
T Consensus 243 --~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (416)
T 1qz9_A 243 --PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIEL 320 (416)
T ss_dssp --TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 45544443211 1123356777777777777642 235677888888888998888
Q ss_pred hccC-C--CCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--CCCHHHHHHH
Q 015890 303 LSPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG--GLVEDDCKAA 373 (398)
Q Consensus 303 l~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~~~~~~ 373 (398)
|++. + ++.+..+. .++++++.++. ..++.+.|. ++||.+.. ..++++|++++ ..++++++++
T Consensus 321 L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~gi~~~~----~~~~~lRis~~~~~~t~~~i~~~ 391 (416)
T 1qz9_A 321 VEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALI-DRGVIGDY----REPRIMRFGFTPLYTTFTEVWDA 391 (416)
T ss_dssp HHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHH-TTTEECEE----ETTTEEEEECCTTTCCHHHHHHH
T ss_pred HHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHH-hCCcEecc----CCCCeEEEeCcccCCCHHHHHHH
Confidence 8775 3 34555543 25678888863 567888775 78998854 24689999997 3789999999
Q ss_pred HHHHHHHHHHHh
Q 015890 374 ADRLRRGLEELV 385 (398)
Q Consensus 374 ~~~l~~~~~~~~ 385 (398)
+++|.+++++..
T Consensus 392 ~~~l~~~~~~~~ 403 (416)
T 1qz9_A 392 VQILGEILDRKT 403 (416)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHhccc
Confidence 999999988754
No 165
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.97 E-value=7.8e-30 Score=243.13 Aligned_cols=358 Identities=15% Similarity=0.121 Sum_probs=241.6
Q ss_pred HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHH--HHHH-HHHh
Q 015890 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELR--DALV-KKLN 82 (398)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~~~~~~~--~~l~-~~l~ 82 (398)
+++...+...+..+.+......+.++|..+.++ .+|.+++++.+.+.+....+|+.. .+....+ +.++ +++.
T Consensus 24 ~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la 101 (447)
T 3h7f_A 24 APLAEVDPDIAELLAKELGRQRDTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK 101 (447)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHhCceeEecCCCC--CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence 334444555555554443333577888766554 489999999988754222334321 2333333 4555 7777
Q ss_pred hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh-h----HHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-M----SFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
+.++.+.. .++++|+++++..++.+++++||+|+++.|+|.++. . .....+..++.+ +.+.+++.+|++++++
T Consensus 102 ~~~g~~~~-~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~ 179 (447)
T 3h7f_A 102 ALFGAEFA-NVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFY-GVDPATHLIDMDAVRA 179 (447)
T ss_dssp HHHTCSEE-ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEE-CCCTTTCSCCHHHHHH
T ss_pred HHcCCCce-EEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEc-CcCcccCCcCHHHHHH
Confidence 77776542 333778889999999999999999999999997732 1 122234567777 7665667799999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCC
Q 015890 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGM 234 (398)
Q Consensus 158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 234 (398)
.++..+ +++|++++|+||++. + +++|.++|+++|+++|+||+| +.+.+...... ...++++.|+||+++
T Consensus 180 ~i~~~~-~~~i~~~~~~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~- 251 (447)
T 3h7f_A 180 TALEFR-PKVIIAGWSAYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLG- 251 (447)
T ss_dssp HHHHHC-CSEEEEECSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGC-
T ss_pred HHHhcC-CeEEEEcCCCCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCC-
Confidence 996432 489999889998876 5 999999999999999999997 33334322222 123477999999985
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCC-CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccC-----C
Q 015890 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL-----G 307 (398)
Q Consensus 235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-----~ 307 (398)
|+|.||++++ +++++.+........ .+++.+.++++..++.. ..+++++..+++.++++++.+.|++. +
T Consensus 252 -G~~gG~i~~~---~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g 327 (447)
T 3h7f_A 252 -GGRSGLIVGK---QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG 327 (447)
T ss_dssp -CCSCEEEEEC---GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred -CCCeEEEEEC---HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 7889999998 677777765543222 33444445555555543 23467888889999999999999887 5
Q ss_pred CCcccc-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe----cC--CCCCCCCeEEEEecC-----CCHHHHHHHHH
Q 015890 308 EGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PG--GACGCRGHLRISFGG-----LVEDDCKAAAD 375 (398)
Q Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g--~~~~~~~~iRi~~~~-----~~~~~~~~~~~ 375 (398)
. .+.. +..++++++.+.....+. +.+.++++++||.+. |+ .....++++|+++.. .++++++++++
T Consensus 328 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~ 405 (447)
T 3h7f_A 328 V-SVVSGGTDVHLVLVDLRDSPLDG-QAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVAD 405 (447)
T ss_dssp C-EEGGGSCSSSEEEEECTTSSCCH-HHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHH
T ss_pred e-EEecCCCCCCEEEEEcCCCCCCH-HHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHH
Confidence 5 4443 345778888886433344 444456678899998 55 223346789998653 36899999999
Q ss_pred HHHHHHHHH
Q 015890 376 RLRRGLEEL 384 (398)
Q Consensus 376 ~l~~~~~~~ 384 (398)
+|.+++.+.
T Consensus 406 ~l~~~l~~~ 414 (447)
T 3h7f_A 406 IIATALATG 414 (447)
T ss_dssp HHHHHHHSG
T ss_pred HHHHHHhcc
Confidence 999988664
No 166
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=6.3e-31 Score=244.11 Aligned_cols=322 Identities=13% Similarity=0.084 Sum_probs=230.1
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCC-c-EEEecChHHHHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV 103 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~-v~~~~g~t~a~~ 103 (398)
.+.++.| +.++|+.+++++.+.+.+.... .........++++.+++.+++++|++++ + +++|+|++++++
T Consensus 5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence 4555555 4678999999999987542100 0111223456788888888888888764 6 567899999999
Q ss_pred HHHHHhccCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCC---CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890 104 NIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (398)
Q Consensus 104 ~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG 178 (398)
.++.+++++||+|+++.+++++. ...++..| +++.+ +.+. .+..+|.++++ ++++ +++|++++|+||||
T Consensus 83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v-~~~~~~~~~~~~~~~~~~--i~~~--t~~v~~~~~~n~tG 156 (362)
T 2c0r_A 83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVA-ASSEASNYMTLPKLQEIQ--LQDN--AAYLHLTSNETIEG 156 (362)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEE-EECGGGTTCSCCCGGGCC--CCTT--EEEEEEESEETTTT
T ss_pred HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEE-ecccccccccCCCHHHcc--cCCC--cCEEEEeCCcCccc
Confidence 99999999999999987776553 45667789 88888 6552 33345666654 5544 59999999999999
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 179 TY-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 179 ~~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
.. .+ +++| +|+++|+|++| +..... ..... ++++.|+||++|++| +||++++ +++++.+.
T Consensus 157 ~~~~~---l~~i------~~~~vivD~a~~~~~~~~--~~~~~--d~~~~s~~K~~g~~G--~G~l~~~---~~~~~~l~ 218 (362)
T 2c0r_A 157 AQFKA---FPDT------GSVPLIGDMSSDILSRPF--DLNQF--GLVYAGAQKNLGPSG--VTVVIVR---EDLVAESP 218 (362)
T ss_dssp EECSS---CCCC------TTSCEEEECTTTTTSSCC--CGGGC--SEEEEETTTTTCCSS--CEEEEEE---GGGSSSCC
T ss_pred eeccc---cccc------CCCEEEEEChhhccCCcc--chhHC--cEEEEeccccccCcC--cEEEEEc---HHHHhhcc
Confidence 96 44 5555 79999999999 443221 12222 477889999999778 8999998 55554432
Q ss_pred Hh------------hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCC-cccc---CCccE
Q 015890 257 KV------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG---GEGAI 318 (398)
Q Consensus 257 ~~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~---~~~~~ 318 (398)
.. .....++.+.+.+.++.++++...+ .+++..++++++++++.+.|++++.. .+.. ...+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 298 (362)
T 2c0r_A 219 KHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDM 298 (362)
T ss_dssp TTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSS
T ss_pred ccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCc
Confidence 21 1123467888888988888875222 57888899999999999999988722 4322 12245
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
++++.++.. .+..++++.| .++||.+.+|..+ .+++|+|++. .++++++++++.|++++++
T Consensus 299 ~~~~~~~~~-~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 299 NITFRLASE-ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp EEEEECSCH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCc-chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 577777642 2456777776 5889999887655 4689999987 6899999999999988764
No 167
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=4.6e-31 Score=244.74 Aligned_cols=328 Identities=11% Similarity=0.035 Sum_probs=226.1
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~ 107 (398)
+...+..+..+.++.+++|++.+++.+.+.. ..|++..+..++++.+++++ +.+ ..++++|+++++..++.
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~----~~~--~~i~~~~g~~a~~~a~~ 81 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKIL----GKQ--SAVFFPSGTMAQQIALR 81 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHH
Confidence 3456777778888888899999998875433 34666667788888888876 443 23556888899999999
Q ss_pred HhccCCCE--EEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC-ccCC
Q 015890 108 TLCDAGDS--VVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYI 181 (398)
Q Consensus 108 ~l~~~gd~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt-G~~~ 181 (398)
+++.+||+ |+++.+.|.... ......|.+++.+ +.+ .+.+|+++|++. .++ +++|++++|+||+ |.++
T Consensus 82 ~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~-~~~--~~~v~~~~p~n~~~G~~~ 155 (359)
T 3pj0_A 82 IWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLL-GTA--NQLLTIDDIKSL-REP--VSSVLIELPQREIGGQLP 155 (359)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEEC-SCT--TSCCCHHHHHTC-SSC--CSEEEEESSBGGGTSBCC
T ss_pred HHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEec-CCc--CCCcCHHHHHhc-cCC--ceEEEEEecccCCCcccC
Confidence 99888876 555555543322 2225569999988 653 347899999998 443 5999999999998 7999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece-ec---cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY-FM---YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~-~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
+.+++++|+++|++||+++|+|++| +. +.+..........++++.|+||.++.++ + |+++.+ +++++.+..
T Consensus 156 ~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~---~~l~~~~~~ 230 (359)
T 3pj0_A 156 AFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA-G-AILAGN---DDFVQEAKI 230 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS-C-EEEEEC---HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc-e-EEEECC---HHHHHHHHH
Confidence 9999999999999999999999998 21 2222221111222355679999987442 2 777777 788888876
Q ss_pred hhccCCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCC-CChHH
Q 015890 258 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKH-LDDFE 333 (398)
Q Consensus 258 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 333 (398)
.......+ .......++..+++. . .+..+++.++++++.+.|++++++.+. .+..++++|+.++... .+..+
T Consensus 231 ~~~~~~~~~~~~~~~~~a~~~~l~~---~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
T 3pj0_A 231 WKRRYGGDLISLYPYILSADYYFEK---R-IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAI 306 (359)
T ss_dssp HHHHTTCCCSCCHHHHHHHHHHHHH---H-GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHH
T ss_pred HHHHhCCCcchhHHHHHHHHHHHHH---H-HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHH
Confidence 54322222 222333333344442 1 234445677788899999888665664 4556888888876421 12345
Q ss_pred HHHHHHHhcCeEEecCCCCCC--CCeEEEEecC----CCHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGG----LVEDDCKAAADRLRRG 380 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~----~~~~~~~~~~~~l~~~ 380 (398)
+.+.| .++||.++||..|.. .+++|++++. .+.+++++++++|.++
T Consensus 307 l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 307 LTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 55655 589999999987653 3589998763 3678888888888765
No 168
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=2.8e-31 Score=246.27 Aligned_cols=324 Identities=13% Similarity=0.086 Sum_probs=229.4
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCC---CCCCCCC---CCCcHHHHHHHHHHHhhhcCCC-CCcEEEecCh-HHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA---DEGLPELRDALVKKLNQENKLY-KSSVMVTAGA-NQAF 102 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~-t~a~ 102 (398)
.+++++.|.+ ++|+.+++++.+.+.+. ....|.. ..+..++.+.+.++++++++++ +++|++++|+ ++++
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al 80 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence 4567777643 67899999999987542 1112222 3344456667777777777875 5689999999 9999
Q ss_pred HHHHHHhccC---CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH-hhccCCCCeEEEEeCCCCCC
Q 015890 103 VNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPS 177 (398)
Q Consensus 103 ~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~-~l~~~~~~~~v~i~~p~npt 177 (398)
..++.+++.+ ||.|+++.++|.. ...++..| +++.+ +.++ ++ .+|++++++ .++++ +++|++++|+|||
T Consensus 81 ~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v-~~~~~~~-~~d~~~l~~~~i~~~--~k~v~~~~~~npt 154 (360)
T 1w23_A 81 TMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIA-ASTKANS-YQSIPDFSEFQLNEN--DAYLHITSNNTIY 154 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEE-EECGGGT-SCSCCCGGGCCCCTT--EEEEEEESEETTT
T ss_pred HHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEe-ecccccC-cCCccchHhhccCCC--CCEEEEeCCCCCc
Confidence 9999999865 5567777776644 33467789 99988 7765 44 478999998 88655 4999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
|.+++ ++. +++|+++|+|++| ....... .... +++++|+||.+|++| +||++++ +++++.+.
T Consensus 155 G~~~~--~i~------~~~~~~li~D~a~~~~~~~~~--~~~~--di~~~s~sK~~~~~G--~G~~~~~---~~~~~~~~ 217 (360)
T 1w23_A 155 GTQYQ--NFP------EINHAPLIADMSSDILSRPLK--VNQF--GMIYAGAQKNLGPSG--VTVVIVK---KDLLNTKV 217 (360)
T ss_dssp TEECS--SCC------CCCSSCEEEECTTTTTSSCCC--GGGC--SEEEEETTTTTSCTT--CEEEEEE---HHHHCSCC
T ss_pred ceecc--ccc------ccCCceEEEechhhcCCCCcC--cccC--CEEEEEcccccCCCC--cEEEEEc---HHHHhhcc
Confidence 99987 232 2799999999999 4332211 1112 378999999998666 8999998 66665543
Q ss_pred Hhh------------ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCC-ccc-cC--CccE
Q 015890 257 KVQ------------DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEG-AVK-GG--EGAI 318 (398)
Q Consensus 257 ~~~------------~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~-~~--~~~~ 318 (398)
... .....+.+...+.++..+++... . ++++..++++++++++.+.|++++.+ ... .+ .++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 297 (360)
T 1w23_A 218 EQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLM 297 (360)
T ss_dssp TTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSS
T ss_pred cCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCc
Confidence 321 01123456666667777776422 2 57788888999999999999887742 332 12 2345
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
++++.++.. .+..+++++| .++||.+.++..+ +++||++++. .+++++++++++|++++++
T Consensus 298 ~~~~~~~~~-~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 298 NVTFNLRNE-ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp EEEEECSSH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC-ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 888888642 1345677765 4799999888643 6799999997 6889999999999887654
No 169
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=4.6e-30 Score=241.89 Aligned_cols=336 Identities=16% Similarity=0.121 Sum_probs=233.9
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
++.+++++.+ +++ ||++++++.+.+.+....+|+ ......++++.+++.+.+.++.+++.+++++| ++++
T Consensus 23 ~~~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~ 98 (405)
T 2vi8_A 23 HAKIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQAN 98 (405)
T ss_dssp HHSEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHH
T ss_pred hcceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHH
Confidence 3457777554 343 899999999887532112221 11223456655556666666776544444555 9999
Q ss_pred HHHHHHhccCCCEEEEeCCCCcChhh-H--HHhcC--cEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015890 103 VNIVLTLCDAGDSVVMFAPYYFNSYM-S--FQMTG--VTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP 176 (398)
Q Consensus 103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~np 176 (398)
..++.+++++||+|+++.|+|..+.. . +...| .+++.+ +.++.++.+|++.+++.++. ++ ++|+++ |+|.
T Consensus 99 ~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~--~~v~~~-~~~~ 174 (405)
T 2vi8_A 99 MAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKARLHRP--KLIVAA-AAAY 174 (405)
T ss_dssp HHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHHHHHCC--SEEEEC-CSSC
T ss_pred HHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEec-ccccccCCcCHHHHHHHHHhcCC--eEEEEe-CCCC
Confidence 99999999999999999999977643 1 12334 377777 66544567899999999985 54 888774 4443
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHH
Q 015890 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~ 252 (398)
|...+ +++|.++|+++|+++|+||+| ++. .+....... ..+++++|+||+++ ++| ||++++ ++++
T Consensus 175 -~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~~~g~~g---G~~~~~---~~~~ 243 (405)
T 2vi8_A 175 -PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP-YAHFVTTTTHKTLRGPRG---GMILCQ---EQFA 243 (405)
T ss_dssp -CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSEEEEESSSTTCCCSC---EEEEEC---HHHH
T ss_pred -CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCccc-cCCEEEEeccccCCCCCC---eEEEEc---HHHH
Confidence 45556 899999999999999999999 332 222211111 23488999999997 455 999998 7888
Q ss_pred HHHHHhhccCCCCc-chHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCC
Q 015890 253 TQLLKVQDNIPICA-SIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHL 329 (398)
Q Consensus 253 ~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~ 329 (398)
+.+.........+. +....+++.++++.. ..++++..+++.++++++.+.|++++. .+..+ ..++++|+.++....
T Consensus 244 ~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~ 322 (405)
T 2vi8_A 244 KQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGF-TLVSGGTDNHLLLVDLRPQQL 322 (405)
T ss_dssp HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTC
T ss_pred HHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eEecCCCCceEEEEEccCCCC
Confidence 88776553333333 455555555666542 356788888999999999999988754 66554 347888999864223
Q ss_pred ChHHHHHHHHHhcCeEEecCCC----C--CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHHh
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGA----C--GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~----~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+..++...| .++||.+.+|.. + ..++++|++++. .+++++++++++|+++++++.
T Consensus 323 ~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 323 TGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred CHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 566777766 589999999863 1 235789999884 579999999999999886653
No 170
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=7.3e-30 Score=244.97 Aligned_cols=346 Identities=18% Similarity=0.156 Sum_probs=246.3
Q ss_pred hHHHHHHHHHHcCC----CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHhhhcCCCC
Q 015890 17 PIMVQIQELVRGAK----NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYK 89 (398)
Q Consensus 17 ~~~~~~~~~~~~g~----~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~ 89 (398)
..++.+.+....+. ..+.|+ +..+ ...|.+.+++.+.+.. .+.|++ ..|..++++.+++++.+.+|.+.
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~lg-~~~~-~~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~ 124 (474)
T 1wyu_B 49 TLVRHYTGLSRRQVGVDTTFYPLG-SCTM-KYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA 124 (474)
T ss_dssp HHHHHHHHHHTTCCCTTTSCCCBT-TTCC-CCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHhCCCCcccCccccc-cccc-cCCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc
Confidence 34555555554433 356666 5433 2346777777765333 234443 45667899999999999888764
Q ss_pred CcEEEecChHHHHHHHHHHh----ccCCC-----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 90 SSVMVTAGANQAFVNIVLTL----CDAGD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l----~~~gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
.+++++|+++++..++.++ .++|| +|+++.++|+.+...++..|++++.+ +.+++ +.+|+++|+++++
T Consensus 125 -~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v-~~~~~-~~~d~~~L~~~i~ 201 (474)
T 1wyu_B 125 -ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREI-PSGPE-GEVDLEALKRELG 201 (474)
T ss_dssp -EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTT-SSBCHHHHHHHCS
T ss_pred -eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEe-cCCCC-CCcCHHHHHHhhC
Confidence 4667899999999866554 35777 99999999999999999999999999 87654 5789999999998
Q ss_pred cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC-c-
Q 015890 161 TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM-G- 236 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G- 236 (398)
+++ ++|++++| ||+|.+ .+ +++|+++|+++|+++|+|++| ....+.. .....+.++++.|+||+|+.| |
T Consensus 202 ~~t--~~v~~~~p-n~~G~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g~~-~~~~~g~di~~~s~~K~~~~p~g~ 274 (474)
T 1wyu_B 202 PHV--AALMLTNP-NTLGLFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWA-RPGDMGFDVVHLNLHKTFTVPHGG 274 (474)
T ss_dssp TTE--EEEEECSS-CTTSCCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTC-CHHHHTCSEEECCTTTTTCCCCTT
T ss_pred CCc--eEEEEECC-CCCcccCCC---HHHHHHHHHHcCCEEEEeCchhhhhccCC-CcccCCCcEEEEeCccccccCCCC
Confidence 654 89999988 589998 45 999999999999999999999 3322211 111123568889999999765 4
Q ss_pred --ceeEEEEccCCcHHHHHHHHH-hh------------------ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHH
Q 015890 237 --WRVGYIAYPSEVEGFATQLLK-VQ------------------DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVR 294 (398)
Q Consensus 237 --~r~G~i~~~~~~~~~~~~l~~-~~------------------~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 294 (398)
+|+||++++ +++++.+.. .. ....++.+...+.++..++.. +.+++++..+++.+
T Consensus 275 gG~~~G~~~~~---~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~ 351 (474)
T 1wyu_B 275 GGPGSGPVGVK---AHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVL 351 (474)
T ss_dssp SCCCCCCEEEC---GGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEc---HHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 599999999 555554431 00 011234566777777777763 34567788888999
Q ss_pred HHHHHHHHhccCCCCccccCCccE-EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecC-CCHHHH
Q 015890 295 NREIIREALSPLGEGAVKGGEGAI-YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDC 370 (398)
Q Consensus 295 ~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~ 370 (398)
+++++.+.|++.+. .+..+...+ .+++.++. ..+..++.++|+ ++||.+ ++..|. ..+++||+++. .+.+++
T Consensus 352 ~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~i 427 (474)
T 1wyu_B 352 NARYLKELLKEKGY-RVPYDGPSMHEFVAQPPE-GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETL 427 (474)
T ss_dssp HHHHHHHHHHHTTC-BCSSCSSCCSCEEEBCST-TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHH
T ss_pred HHHHHHHHHhhcCc-EecCCCCcceEEEEEcCC-CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHH
Confidence 99999999987743 543222122 15566632 236778888886 679985 444443 36799999997 688999
Q ss_pred HHHHHHHHHHHHH
Q 015890 371 KAAADRLRRGLEE 383 (398)
Q Consensus 371 ~~~~~~l~~~~~~ 383 (398)
++++++|++++++
T Consensus 428 d~~~~~L~~~~~~ 440 (474)
T 1wyu_B 428 EAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 171
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=1.7e-29 Score=245.14 Aligned_cols=310 Identities=13% Similarity=0.061 Sum_probs=231.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcE--EEecChHHHHHHHHHHhccCC--------CEEEEeCCCCcChhh
Q 015890 61 ISKYGADEGLPELRDALVKKLNQENKLYK--SSV--MVTAGANQAFVNIVLTLCDAG--------DSVVMFAPYYFNSYM 128 (398)
Q Consensus 61 ~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v--~~~~g~t~a~~~~~~~l~~~g--------d~Vl~~~p~~~~~~~ 128 (398)
...|...++..++++.+.+++.+.+|.++ +++ ++++|+++++..++.+++++| |+|+++.++|.++..
T Consensus 128 ~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~ 207 (514)
T 3mad_A 128 PLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK 207 (514)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH
T ss_pred CcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH
Confidence 34454556677889999999999888764 677 999999999999999998766 899999999999999
Q ss_pred HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206 (398)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-- 206 (398)
.++..|++++.+ +.++ ++.+|+++|++++++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|
T Consensus 208 ~~~~~G~~v~~v-~~~~-~~~~d~~~Le~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~ 280 (514)
T 3mad_A 208 AAQYFGIKLVRT-PLDA-DYRADVAAMREAITPNT--VVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGG 280 (514)
T ss_dssp HHHHHTCEEEEE-CBCT-TSCBCHHHHHHHCCTTE--EEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHcCCeeEEe-eeCC-CCCCCHHHHHHHhccCC--EEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEeccccc
Confidence 999999999999 8776 46789999999998754 99999999999999999 899999999999999999999
Q ss_pred ecc-----CCC---ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-----------cCCCCcc
Q 015890 207 FMY-----DGR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-----------NIPICAS 267 (398)
Q Consensus 207 ~~~-----~~~---~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~-----------~~~~~~~ 267 (398)
+.. .|. .......+.++++.|++|+++ +|.++|++++++ +.......... ....+.+
T Consensus 281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~gs~~ 356 (514)
T 3mad_A 281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRR---PDLLHYQYFIAADWPGGLYFSPTFAGSRP 356 (514)
T ss_dssp TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESS---HHHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred ccchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeC---HHHhccccccccccCCCcccCCccCCCCc
Confidence 321 122 122222345688899999964 678899998884 33222110000 0011223
Q ss_pred hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 268 IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 268 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
.....++..++.. +..++++..++..++++++.+.|++++.+.+..+. ..++++.... .+..++.++|. ++||.+
T Consensus 357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~--~~~~~l~~~L~-~~Gi~v 432 (514)
T 3mad_A 357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDE--LNIYQVMEEMA-GRGWRL 432 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSS--SCHHHHHHHHH-TTTCBC
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCC--CCHHHHHHHHH-hcCCEe
Confidence 3333333333332 23567888888999999999999988666776665 3466666542 35778888775 779988
Q ss_pred ecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhccc
Q 015890 347 IPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKDG 388 (398)
Q Consensus 347 ~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~~ 388 (398)
++. ..++++|++++. .+++++++++++|+++++++.+..
T Consensus 433 -~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~ 473 (514)
T 3mad_A 433 -NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHP 473 (514)
T ss_dssp -EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCT
T ss_pred -ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 443 236789999884 456899999999999998876543
No 172
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=3.4e-29 Score=233.44 Aligned_cols=312 Identities=12% Similarity=0.089 Sum_probs=225.1
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh---ccCCCEEEEe
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL---CDAGDSVVMF 119 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l---~~~gd~Vl~~ 119 (398)
++||++++++.+.+.+. .|.+.....++++.+++++ +.+ ++++++|+++|+..++.++ .++||+|+++
T Consensus 10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFL----GVK--HALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 46899999999988653 1334556678888888887 443 8999999999999999999 8899999999
Q ss_pred CCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
.|+|+++...++..|++++.+ +.++++ .+|++.+++.++++ +++|+++++ ||.+.+ +++|.++|+++|++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~--~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 81 PISFVATANMLLESGYTPVFA-GIKNDG-NIDELALEKLINER--TKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp SSSCTHHHHHHHHTTCEEEEC-CBCTTS-SBCGGGSGGGCCTT--EEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred CCccHhHHHHHHHCCCEEEEe-ccCCCC-CCCHHHHHhhcCcC--ceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 999999999999999999999 877665 78999999999865 488887765 999999 89999999999999
Q ss_pred EEEeece-eccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEc-cCCcHHHHHHHHHhhccC-------------
Q 015890 200 LVVDNTY-FMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNI------------- 262 (398)
Q Consensus 200 livDe~~-~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~-~~~~~~~~~~l~~~~~~~------------- 262 (398)
+|+|++| +............+ ++++.|+| |.+++ | +|++++ ++ +++++.+.......
T Consensus 151 li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
T 2fnu_A 151 FLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVKS 224 (375)
T ss_dssp EEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEESS
T ss_pred EEEECccccCCeECCeeccccC-CeEEEeCCCCCCccc-c--CceEEEeCC--HHHHHHHHHHHhcCCcccccccccccc
Confidence 9999999 32211111111111 36666777 99974 6 677776 43 56777776543211
Q ss_pred -C--CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC-----ccEEEEeeCCCCCC-ChHH
Q 015890 263 -P--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEKHL-DDFE 333 (398)
Q Consensus 263 -~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~ 333 (398)
. +..+....++....+ +++++..++.+++++++.+.|++++++.+..+. ..+++++.++.... +..+
T Consensus 225 ~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
T 2fnu_A 225 IGHNFRLNEIQSALGLSQL----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKL 300 (375)
T ss_dssp CCCBCCCCHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHH
T ss_pred ccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHH
Confidence 1 123333333222222 335677788888999999999987654555431 12345667653212 4667
Q ss_pred HHHHHHHhcCeEEecCCC-------CC-------C-------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIPGGA-------CG-------C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+.+.|. ++||.++.... |+ . .+++||+++. .+++++++++++|+++++++
T Consensus 301 l~~~L~-~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 301 ILESLH-KRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHH-HTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 888774 88999984321 10 1 1579999997 78999999999999988764
No 173
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=2.7e-30 Score=239.34 Aligned_cols=313 Identities=14% Similarity=0.090 Sum_probs=213.3
Q ss_pred cHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCC--EEEEeCC
Q 015890 45 PKMAMEKVKELVW-DPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFAP 121 (398)
Q Consensus 45 ~~~v~~a~~~~~~-~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd--~Vl~~~p 121 (398)
.+++++++.+.+. ......|+++++..++++.+++++ +. +..++++|+++++..++.+++.+|| .|+++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~ 96 (357)
T 3lws_A 23 NVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVL----GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPL 96 (357)
T ss_dssp BHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred CHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHh----CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEeccc
Confidence 4555555444321 112345766778889999999887 43 3345557888999999999988887 6777666
Q ss_pred CCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcC
Q 015890 122 YYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 122 ~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~ 197 (398)
.|+.... .....|.+++.+ +.+ .+.+|+++|+++.+ +++|++++|+||| |.+++.+++++|+++|++||
T Consensus 97 ~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~~~----~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~ 169 (357)
T 3lws_A 97 CHLEIHEQDGLKELHPIETILV-GAA--DRLMTLDEIKALPD----IACLLLELPQREIGGVAPAFSELETISRYCRERG 169 (357)
T ss_dssp CHHHHSSTTHHHHHSSCEEEEC-SCT--TSCCCHHHHHTCCS----CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTT
T ss_pred ceeeeeccchhhhccCcEEEEe-cCC--CCCcCHHHHhcCcC----cceEEEEcccccCCceeCCHHHHHHHHHHHHHcC
Confidence 6544332 356678999888 642 34689999998832 5999999999998 99999999999999999999
Q ss_pred CEEEEeecee----ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC--cchHHH
Q 015890 198 SWLVVDNTYF----MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC--ASIISQ 271 (398)
Q Consensus 198 ~~livDe~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~ 271 (398)
+++|+|++|. .+.+...........+++.|+||.++.++ .||++.+ +++++.+.........+ .....+
T Consensus 170 ~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~--gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (357)
T 3lws_A 170 IRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIA--GAILAGP---AAFCQTARIWKRRYGGDLISLYPYI 244 (357)
T ss_dssp CEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSS--CEEEEEC---HHHHHHHHHHHHHTTCCCSCCHHHH
T ss_pred CEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCc--eEEEEcC---HHHHHHHHHHHHHhcCCcccchHHH
Confidence 9999999982 22232221111112245789999994232 2999888 78888887655332222 223333
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecC
Q 015890 272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPG 349 (398)
Q Consensus 272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g 349 (398)
.++..+++. +. +..+++.++++++.+.|++++++.+ ..+.+++++|++++... .+..++.+.| .++||.++||
T Consensus 245 ~~~~~~l~~---~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~g 319 (357)
T 3lws_A 245 VSADYYYEL---RK-DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQ-EETGLGFVGY 319 (357)
T ss_dssp HHHHHHHHH---HT-TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHH-HHHCEESCSC
T ss_pred HHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHH-HhcCeEEecc
Confidence 444445542 22 2233456778888999988866566 34666899999987421 1234566555 5899999999
Q ss_pred CCCCCCC--eEEEEecC----CCHHHHHHHHHHHHHHH
Q 015890 350 GACGCRG--HLRISFGG----LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 350 ~~~~~~~--~iRi~~~~----~~~~~~~~~~~~l~~~~ 381 (398)
..+. ++ ++|++++. .+.+++++++++|.+++
T Consensus 320 ~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 320 LVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp CEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 7665 44 89999774 36788898888887764
No 174
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=4.5e-30 Score=245.47 Aligned_cols=330 Identities=13% Similarity=0.091 Sum_probs=219.0
Q ss_pred cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+|+.++||+.|. ++++ .||.+.+++.+++.+.. .| .+..++++.+++++.+.++ +.++|++++|+++|+..
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~ 128 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLL 128 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHH
Confidence 467799998875 3333 68999999999987632 23 2356899999999988876 67899999999999999
Q ss_pred HHHH---hccCCCEEEEeCCCCcChhhHHHh-----------cCcE------EEEeccCCCCCCCCChHHHHHhhccC-C
Q 015890 105 IVLT---LCDAGDSVVMFAPYYFNSYMSFQM-----------TGVT------HILVGPCSSKTLHPDADWLEKTLETK-P 163 (398)
Q Consensus 105 ~~~~---l~~~gd~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~e~l~~~l~~~-~ 163 (398)
++++ +.+ +++|++.+|+|+++...+.. .|+. +..+ +. .|+++|++.++.. .
T Consensus 129 al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~ 200 (453)
T 2cy8_A 129 ALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-RP------DDIEGMREVFANHGS 200 (453)
T ss_dssp HHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEE-CT------TCHHHHHHHHHHHGG
T ss_pred HHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-CC------CCHHHHHHHHHhcCC
Confidence 9998 554 47899999999876553321 1221 2222 21 3899999998731 2
Q ss_pred CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890 164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (398)
.+++|++++.+|+||.+ .+++++++|.++|++||+++|+||+| + +.+........+....+.|+||.++ +|+|+|
T Consensus 201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G~~~G 278 (453)
T 2cy8_A 201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASA-GGLPGG 278 (453)
T ss_dssp GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGG-TTSSCE
T ss_pred CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhh-CCcceE
Confidence 24677666556779976 57999999999999999999999999 5 3332211111111111338999998 589999
Q ss_pred EEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015890 241 YIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSP----LGEGA 310 (398)
Q Consensus 241 ~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~ 310 (398)
|++++ +++++.+.. .....+++.|+++++++.++|+. . .++..++++++++++.+.|++ .+...
T Consensus 279 ~v~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 352 (453)
T 2cy8_A 279 ILGGR---EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAMNHLFARKGLNW 352 (453)
T ss_dssp EEEEC---HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred EEech---HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 99999 777776644 11233567888888888888864 2 123344555555555555543 34433
Q ss_pred cccCCccEEEEeeCCC-----C-------------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHH
Q 015890 311 VKGGEGAIYLWARLPE-----K-------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA 372 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 372 (398)
...+. +.++|+.++. . .....++...|+ ++||.+.|+ +.+|+++. .+++++++
T Consensus 353 ~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~l~~~-~t~~~i~~ 423 (453)
T 2cy8_A 353 LAYGR-FSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVFLSAQ-HEREHVEH 423 (453)
T ss_dssp EEECC-TTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEECCTT-CCHHHHHH
T ss_pred EEEEe-eeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEEeecc-CCHHHHHH
Confidence 34444 6788888864 1 011456777776 789999653 24777644 59999999
Q ss_pred HHHHHHHHHHHHhccc
Q 015890 373 AADRLRRGLEELVKDG 388 (398)
Q Consensus 373 ~~~~l~~~~~~~~~~~ 388 (398)
++++|.++++++.+.+
T Consensus 424 ~l~~l~~~l~~~~~~~ 439 (453)
T 2cy8_A 424 LVTTFDRVLDRLADEN 439 (453)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999886643
No 175
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.97 E-value=9.9e-31 Score=249.38 Aligned_cols=337 Identities=13% Similarity=0.094 Sum_probs=227.2
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHH-H-HHHH---hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecC
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAM-E-KVKE---LVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAG 97 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~-~-a~~~---~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g 97 (398)
.+|+.|+||..|. ++++ .+|.+. + ++.+ ++.... .|+ ..+..+....+++.+.+.++ .+.++|++++|
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~-~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~ 127 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK--PSN-SDVYSVAMARFVETFARVLGDPALPHLFFVEG 127 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC--CCT-TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESS
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC--CCC-cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCc
Confidence 4577899997665 4454 489999 9 9999 776532 232 12233445555555555555 45789999999
Q ss_pred hHHHHHHHHHHhc---c-----------CCCEEEEeCCCCcChhhHHHh---------cCc-----EEEEeccCCCCCC-
Q 015890 98 ANQAFVNIVLTLC---D-----------AGDSVVMFAPYYFNSYMSFQM---------TGV-----THILVGPCSSKTL- 148 (398)
Q Consensus 98 ~t~a~~~~~~~l~---~-----------~gd~Vl~~~p~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~- 148 (398)
+++|++.+++.+. + +|++|++++|+|+++...+.. .+. .+..+ +.++.+.
T Consensus 128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~ 206 (449)
T 2cjg_A 128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDA-PYMRPGLD 206 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECC-CCCCTTCC
T ss_pred hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEE-cCCCchhh
Confidence 9999999998653 2 289999999999886543211 122 34444 4332101
Q ss_pred --------CCChHHHHHhhcc-CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc
Q 015890 149 --------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC 216 (398)
Q Consensus 149 --------~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~ 216 (398)
..+++.|++.++. ...+++|+++..+||+|. .++++++++|.++|++||+++|+||+| +++.|.....
T Consensus 207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~ 286 (449)
T 2cjg_A 207 EPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAY 286 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTH
T ss_pred ccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceee
Confidence 1356668888862 122577777766799995 889999999999999999999999999 6665542221
Q ss_pred ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH-----HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHH
Q 015890 217 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL-----KVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 291 (398)
Q Consensus 217 ~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 291 (398)
...+....+.|+||.+ |+||++++ +++++.+. ......+++.++++++++.++|+...+ ++..++
T Consensus 287 ~~~~~~~di~t~sK~l-----~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~ 356 (449)
T 2cjg_A 287 QQLDVAPDIVAFGKKT-----QVCGVMAG---RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA--EGLFER 356 (449)
T ss_dssp HHHTCCCSEEEECGGG-----SSEEEEEC---GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH--HTHHHH
T ss_pred cccCCCceEEEecCcc-----cEEEEEEC---HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh--ccHHHH
Confidence 1101111133788988 68999988 56665421 223335677889999999988874221 234455
Q ss_pred HHHHHHHHHHHhcc----CCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890 292 LVRNREIIREALSP----LGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 365 (398)
Q Consensus 292 ~~~~~~~l~~~l~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~ 365 (398)
++++++++.+.|++ .+. +....+. +++++++++.. .+..+++.+|+ ++||.+.++. .++||++++. .
T Consensus 357 ~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~~~ 429 (449)
T 2cjg_A 357 AVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSLPTT-ADRDELIRQLW-QRAVIVLPAG----ADTVRFRPPLTV 429 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEET----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEECCh-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECCCCC
Confidence 66666666666654 343 3344455 66667788642 13567888886 7899999863 6899998776 7
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015890 366 VEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~ 384 (398)
+++++++++++|.++++++
T Consensus 430 t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 430 STAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 176
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=3.4e-30 Score=244.96 Aligned_cols=332 Identities=16% Similarity=0.125 Sum_probs=225.1
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||+.|. ++++ .+|++.+++.+++.+.....| ..++++.+++.+.+.++ ..++|++++|+++|+.
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~ 126 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-----PGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATM 126 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHH
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 3578899999886 3444 689999999999876322223 23455556666655554 4789999999999999
Q ss_pred HHHHHh--ccCCCEEEEeCCCCcChhhHHH-h-------------cCc------EEEEeccCCCCCCCCChHHHHHhhcc
Q 015890 104 NIVLTL--CDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLET 161 (398)
Q Consensus 104 ~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~l~~ 161 (398)
.+++.. ..++++|++++|+|+++...+. . .|+ ++..+ +. .|++.|++.++.
T Consensus 127 ~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~ 199 (434)
T 2epj_A 127 TAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT-PY------NDVEALERVFAE 199 (434)
T ss_dssp HHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE-ET------TCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec-CC------CCHHHHHHHHHh
Confidence 999872 3345789999999988654221 1 122 23333 22 288999999873
Q ss_pred C-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc
Q 015890 162 K-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 162 ~-~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 237 (398)
. ..+++|+++..+|+||.+. +++++++|.++|++||+++|+||+| + ..+........+....+.|+||.++ +|+
T Consensus 200 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G~ 277 (434)
T 2epj_A 200 YGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIG-GGF 277 (434)
T ss_dssp HGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGG-TTS
T ss_pred CCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhc-CCc
Confidence 1 1247777766667899866 7999999999999999999999999 4 3232111111111122348899998 589
Q ss_pred eeEEEEccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA 310 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~ 310 (398)
|+||++++ +++++.+.... ...+++.+++.++++.++|+...+ ++..++++++.+++.+.|+++ +...
T Consensus 278 ~~G~v~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 352 (434)
T 2epj_A 278 PVGAVAGS---REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAASEVLDRTGLPY 352 (434)
T ss_dssp SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred ceeeeeec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 99999999 77777665421 234567888898888888874211 234455566666666666543 4432
Q ss_pred cccCCccEEEEeeCCCCC------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 015890 311 VKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR 378 (398)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 378 (398)
...+. ++++++.++... ....++...|+ ++||.+.++. ...+|+++. .+++++++++++|.
T Consensus 353 ~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~ 425 (434)
T 2epj_A 353 TINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSN----LEAVFTGLP-HQGEALEIAVEGLR 425 (434)
T ss_dssp EEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CSHHHHHHHHHHHH
T ss_pred EEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccC----CCcEEEecc-CCHHHHHHHHHHHH
Confidence 23344 677888886410 12456777775 7899999874 235777755 59999999999999
Q ss_pred HHHHHHh
Q 015890 379 RGLEELV 385 (398)
Q Consensus 379 ~~~~~~~ 385 (398)
++++++.
T Consensus 426 ~~l~~~~ 432 (434)
T 2epj_A 426 SSLKTVL 432 (434)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998763
No 177
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=9.9e-30 Score=237.07 Aligned_cols=321 Identities=15% Similarity=0.144 Sum_probs=229.4
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++++|+.+.++.. + +.+++.+.+... .|.+..+..++++.+++++ +. +++++++|+++++..++.++
T Consensus 6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~a~~~~~~~~ 73 (374)
T 3uwc_A 6 VPYSYLERQFADIE--P-YLNDLREFIKTA---DFTLGAELEKFEKRFAALH----NA--PHAIGVGTGTDALAMSFKML 73 (374)
T ss_dssp BCSCCHHHHTSSCH--H-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHT----TC--SEEEEESCHHHHHHHHHHHT
T ss_pred ceeeccccCCCCch--H-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHc
Confidence 45778887776653 4 888888877553 3667778888999999887 33 37889999999999999999
Q ss_pred -ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 110 -~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
.++||+|+++.|+|+++...++..|.+++.+ +.+ +++.+|++.+++.+++++ ++|+ |+||||.+.+ +++
T Consensus 74 ~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~--~~v~---~~n~~G~~~~---~~~ 143 (374)
T 3uwc_A 74 NIGAGDEVITCANTFIASVGAIVQAGATPVLV-DSE-NGYVIDPEKIEAAITDKT--KAIM---PVHYTGNIAD---MPA 143 (374)
T ss_dssp TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBC-TTSSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred CCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-ecC-CCCCcCHHHHHHhCCCCc--eEEE---EeCCcCCcCC---HHH
Confidence 8999999999999999999999999999999 776 556789999999998753 7777 8899999998 999
Q ss_pred HHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015890 189 ISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-- 261 (398)
Q Consensus 189 i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-- 261 (398)
|.++|+++|+++|+|++| . .+.+...... .++++.|+| |.++.+|. +|+++.++ +++.+.+......
T Consensus 144 i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~---~d~~~~s~~~~K~l~~~g~-~g~~~~~~--~~~~~~~~~~~~~~~ 217 (374)
T 3uwc_A 144 LAKIAKKHNLHIVEDACQTILGRINDKFVGSW---GQFACFSLHPLKNLNVWSD-AGVIITHS--DEYAEKLRLYRNHGL 217 (374)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTSS---SSEEEEECSSSSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTE
T ss_pred HHHHHHHcCCEEEEeCCCccCceeCCeecccc---ccEEEEeCCCCCcCCccce-eEEEEeCC--HHHHHHHHHHHhcCc
Confidence 999999999999999999 2 2333222211 246677766 99975465 78888775 6777777655421
Q ss_pred ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc-CCccEEEEeeCCCCCC
Q 015890 262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG-GEGAIYLWARLPEKHL 329 (398)
Q Consensus 262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 329 (398)
..+..+....++....+ +.+++..++.+++.+++.+.|++++. +.+.. +.++...|..+.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (374)
T 3uwc_A 218 INRDVCVEYGINCRMDTIQAVIANRLM----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK 293 (374)
T ss_dssp EETTEESSCCCBCBCCHHHHHHHHHHG----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET
T ss_pred cccCccccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC
Confidence 11222333333332222 23566777777888889999888764 34432 2222221111110011
Q ss_pred ChHHHHHHHHHhcCeEEecCCCC----C-------------------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 330 DDFEVVRWLAHRHGVVVIPGGAC----G-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 330 ~~~~~~~~ll~~~gi~v~~g~~~----~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+..++.+.|. ++||.++++... . ..+.+|++++. .+++|++++++.|++++++
T Consensus 294 ~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 294 YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-HCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 4667777764 789999988611 0 01679999888 8999999999999998865
No 178
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.7e-29 Score=234.47 Aligned_cols=283 Identities=20% Similarity=0.197 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCC
Q 015890 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSK 146 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~ 146 (398)
.+.++.+.+.+.++++. +++++++|+++|+..++.+++++||+|+++.|+|+++...++. .|.+++.+ +.+
T Consensus 80 ~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~-- 154 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV-DGD-- 154 (414)
T ss_dssp CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT--
T ss_pred ChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe-CCC--
Confidence 44566666666666564 5788999999999999999999999999999999987766644 89999988 653
Q ss_pred CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~ 225 (398)
|++.|++++++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++| .++...+. ..+.++++
T Consensus 155 ----d~~~l~~ai~~~t--~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~---~~g~div~ 222 (414)
T 3ndn_A 155 ----DLSQWERALSVPT--QAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQGF---PLGVDVVV 222 (414)
T ss_dssp ----CHHHHHHHTSSCC--SEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCCG---GGTCSEEE
T ss_pred ----CHHHHHHhcCCCC--eEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCch---hcCCCeEe
Confidence 8899999998765 99999999999999998 999999999999999999999 33212111 22345889
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
.|+||.++.+| +++|+++++ ++.+. .+.........+.++...+++...++. +..+.++..+++..+.+.|
T Consensus 223 ~S~sK~l~~~G~~~~G~vv~~---~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L 295 (414)
T 3ndn_A 223 YSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET----LAIRVQHSNASAQRIAEFL 295 (414)
T ss_dssp EETTTTTTCSSCCCCEEEEEC---HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccccCCCCceEEEEEEC---HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 99999998778 899999998 56554 555444433445555555555555543 5566677778888888888
Q ss_pred ccCCCCc-cccCC----------------ccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCC---------
Q 015890 304 SPLGEGA-VKGGE----------------GAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACG--------- 353 (398)
Q Consensus 304 ~~~~~~~-~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~--------- 353 (398)
++.+.+. +..|. .+.++++.++.. ..+...+++.+ +..++.+..|..+.
T Consensus 296 ~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~ 374 (414)
T 3ndn_A 296 NGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLGDAKSLVTHPATTT 374 (414)
T ss_dssp HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCSCSSCEEECGGGTT
T ss_pred hcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCCCCCceeeCccccc
Confidence 8776532 22221 366788888642 11234455544 35566666665431
Q ss_pred --------------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 354 --------------CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 354 --------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
.++.||+|++. |+.+.+++.|.+++
T Consensus 375 ~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 375 HRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp TCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 24689999997 55666677777665
No 179
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.4e-29 Score=239.80 Aligned_cols=337 Identities=15% Similarity=0.107 Sum_probs=222.1
Q ss_pred CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (398)
Q Consensus 31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~ 104 (398)
+.+.+..+.+. .||.+.+++.+.+.+....+| ........+++...+++.+.++.++++|++++| ++++..
T Consensus 31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~ 107 (420)
T 3gbx_A 31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA 107 (420)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence 45666555444 589999999988744221122 222333455555556777777887766766655 789999
Q ss_pred HHHHhccCCCEEEEeCCCCcChh---hHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 105 IVLTLCDAGDSVVMFAPYYFNSY---MSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 105 ~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
++.+++++||+|+++.|+|.++. ...... +...+.+ +.+ .++.+|+++|++++++++ +++|++++|+||+
T Consensus 108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~i~~~~-~~~v~~~~~~~~~-- 182 (420)
T 3gbx_A 108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPY-GID-ESGKIDYDEMAKLAKEHK-PKMIIGGFSAYSG-- 182 (420)
T ss_dssp HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEE-EEC-TTCSCCHHHHHHHHHHHC-CSEEEECCTTCCS--
T ss_pred HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEec-cCC-ccCCcCHHHHHHHHHhcC-CeEEEEecCccCC--
Confidence 99999999999999999997633 221222 3455566 555 345789999999998643 5999998888864
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
..+ +++|.++|++||+++|+||+| +.+.+....... ..+++++|+||+++ |.+.||++.++..+++.+.+.
T Consensus 183 ~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~ 256 (420)
T 3gbx_A 183 VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLN 256 (420)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHH
T ss_pred ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhh
Confidence 566 899999999999999999998 333332222222 24588999999995 555699999832226666665
Q ss_pred HhhccCC-CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChHH
Q 015890 257 KVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 257 ~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 333 (398)
....... .+++...+.++..++.. ..+++++..+++.++++++.+.|++.+. .+..+ ..++++|+.++....+...
T Consensus 257 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (420)
T 3gbx_A 257 SAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGY-KVVSGGTENHLFLLDLVDKNLTGKE 335 (420)
T ss_dssp HHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTCCHHH
T ss_pred hhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCC-eeccCCCCCeEEEEEcCCCCCCHHH
Confidence 5443222 23445555555545433 3466788888999999999999987655 55432 4478888887643334555
Q ss_pred HHHHHHHhcCeEEec-------CCCCCCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Q 015890 334 VVRWLAHRHGVVVIP-------GGACGCRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 334 ~~~~ll~~~gi~v~~-------g~~~~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~~ 384 (398)
+...| +++||.+.+ +..+ .++.+||+++. .+++++++++++|.+++.+.
T Consensus 336 ~~~~l-~~~gi~v~~~~~~~~~~~~~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 336 ADAAL-GRANITVNKNSVPNDPKSPF-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp HHHHH-HHTTEECEEECCTTCSSCTT-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHH-HHCCcEeccccCCCCccccC-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 55544 689999998 3323 24569999864 24688999999998887654
No 180
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.97 E-value=2.2e-29 Score=239.01 Aligned_cols=337 Identities=12% Similarity=0.048 Sum_probs=218.2
Q ss_pred HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|.. .++ .+|++.+++.+++.+.....| +. +....+++.+.+.++ ..+++++++|++++++
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~----~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~ 123 (429)
T 4e77_A 50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-PT----EMEVKMAQLVTDLVP-TMDMVRMVNSGTEATM 123 (429)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-CC----HHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-CC----HHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHH
Confidence 36788999998763 444 589999999999877433334 33 445555555555555 5789999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHH-hcCcEE--EEeccCCCCCC------------CCChHHHHHhhccC-CCC
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTH--ILVGPCSSKTL------------HPDADWLEKTLETK-PTP 165 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~~--~~~~~~~~~~~------------~~d~e~l~~~l~~~-~~~ 165 (398)
.+++... .++++|++..++|++....+. ..+... ... +.. .+. ..|+++|++.++.. ..+
T Consensus 124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQ-PNS-PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCC-------------------CCC-TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCC-CCc-CCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 9998654 356799999999988765221 111110 011 110 000 12789999999742 224
Q ss_pred eEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEE
Q 015890 166 KLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 242 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i 242 (398)
++|+++..++++|.+. +++.+++|.++|++||+++|+||+| | ..+........+....+.|+||.++ +|+|+||+
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~-~G~~~G~~ 279 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIG-GGMPVGAF 279 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGG-TTSCCEEE
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeeccccc-CCCCeEEE
Confidence 5555544344455544 4667999999999999999999999 5 3332221111111122348899998 79999999
Q ss_pred EccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890 243 AYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317 (398)
Q Consensus 243 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 317 (398)
+++ +++++.+... ....+++.++++++++.++|+. .++..++..+.....++.+.+.+...+......+. +
T Consensus 280 ~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g 355 (429)
T 4e77_A 280 GGR---REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHV-G 355 (429)
T ss_dssp EEC---HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-T
T ss_pred EEC---HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe-e
Confidence 998 7888776542 2344667899999999888874 13444444444455555666555555653334343 7
Q ss_pred EEEEeeCCCCC-------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 318 IYLWARLPEKH-------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 318 ~~~~~~~~~~~-------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
+++++.++... ....+++..|+ ++||.+.++. ...+|+++. .+++++++++++|++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA----FEAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC----CCCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 78888886531 01156777775 7899999874 345676655 5899999999999988753
No 181
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.97 E-value=2.2e-28 Score=235.95 Aligned_cols=348 Identities=14% Similarity=0.046 Sum_probs=248.7
Q ss_pred cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEE---EecChHHHH
Q 015890 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVM---VTAGANQAF 102 (398)
Q Consensus 28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~---~~~g~t~a~ 102 (398)
++++.+++..-. ...++|.+.+++.+.+... ...|...++..++++.+.+++.+.+|++ ++++. +++|+++++
T Consensus 53 ~gnp~~~l~s~~-t~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~ 130 (502)
T 3hbx_A 53 DGNPRLNLASFV-TTWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAI 130 (502)
T ss_dssp SCCGGGBTTCCS-CCCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHH
T ss_pred CCCCCceecccc-CCCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHH
Confidence 445555544322 2346889999999887653 3334455567889999999999999987 55544 489999999
Q ss_pred HHHHHHhccC--------CC-----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEE
Q 015890 103 VNIVLTLCDA--------GD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 103 ~~~~~~l~~~--------gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
..++.++..+ |+ +|+++.++|..+...++..|++++.+ +.+++++.+|++.|++.+++++ ++|+
T Consensus 131 ~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~ 207 (502)
T 3hbx_A 131 MLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEV-KLSEGYYVMDPQQAVDMVDENT--ICVA 207 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEE-CCBTTBCSCCHHHHHHHCCTTE--EEEE
T ss_pred HHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEE-ecCCCcCcCCHHHHHHHHhhCC--EEEE
Confidence 9998887654 76 89999999999999999999999999 8876657899999999999765 8999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEeece--ec--c-CC-CccccccCCcEEEEcccccccCCCcc
Q 015890 170 VVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTY--FM--Y-DG-RKHCCVEGDHVVNLFSFSKAYGMMGW 237 (398)
Q Consensus 170 i~~p~nptG~~~~~~~l~~i~~l~~~~------~~~livDe~~--~~--~-~~-~~~~~~~~~~~i~~~s~sK~~~~~G~ 237 (398)
+++|+||||.+.| +++|.++|+++ |+++++|++| +. + .+ ........+.+.+..|.+|+++ ++.
T Consensus 208 ~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~-~p~ 283 (502)
T 3hbx_A 208 AILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYA 283 (502)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCS
T ss_pred EecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-CCC
Confidence 9999999999999 89999999999 9999999999 21 1 11 1111112345677889999884 567
Q ss_pred eeEEEEccCCcHHHHHHHHHhh-cc---------CCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 238 RVGYIAYPSEVEGFATQLLKVQ-DN---------IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 238 r~G~i~~~~~~~~~~~~l~~~~-~~---------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
++|+++.++ ++.+....... .. ..++.+.....+...++.. +.+.+.++.++..++++++.+.|+++
T Consensus 284 g~G~~~~~~--~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (502)
T 3hbx_A 284 GIGWVIWRN--KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKT 361 (502)
T ss_dssp SCEEEEESS--GGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEEeC--HHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 789888775 33321111110 00 0112222222333333332 23456788888889999999999999
Q ss_pred CCCccccC-CccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCC---CCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890 307 GEGAVKGG-EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRG 380 (398)
Q Consensus 307 ~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 380 (398)
+.+.+..+ ...+++.+.++... .+..++.+.|. ++||.+.....+ .....+||+++. .+.++++.+++.|+++
T Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~ 440 (502)
T 3hbx_A 362 ERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLR-RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKV 440 (502)
T ss_dssp TCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHH-hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 86566655 44677777776421 34567888774 889987543222 123589999998 7899999999999999
Q ss_pred HHHHhcc
Q 015890 381 LEELVKD 387 (398)
Q Consensus 381 ~~~~~~~ 387 (398)
++.+.+.
T Consensus 441 l~~l~~~ 447 (502)
T 3hbx_A 441 MRELDEL 447 (502)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 9887653
No 182
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=5.7e-30 Score=245.57 Aligned_cols=336 Identities=11% Similarity=-0.006 Sum_probs=227.9
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcC---CCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~---~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~ 105 (398)
++.+.|+.+... +.|+.+.+++.+.+.. .....|. ...+..++.+.+.+++.++++.++++|++++|++++++.+
T Consensus 66 ~~~iyld~~~~g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~ 144 (465)
T 3e9k_A 66 ENAIYFLGNSLG-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLL 144 (465)
T ss_dssp CBCEECBTTTSC-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHH
T ss_pred CCeEEecCCccC-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHH
Confidence 457777776544 3355665555554421 1111111 1112223334444445555588889999999999999999
Q ss_pred HHHhccCCC---EEEEeCCCCcChh----hHHHhcCcEE----EEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCC
Q 015890 106 VLTLCDAGD---SVVMFAPYYFNSY----MSFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNP 173 (398)
Q Consensus 106 ~~~l~~~gd---~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p 173 (398)
+.+++++|+ +|+++.|+|++.. ..++..|+++ +.+.+.+ +++.+|+++|++.++++ +++++|++++|
T Consensus 145 ~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~ 223 (465)
T 3e9k_A 145 MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGV 223 (465)
T ss_dssp HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESB
T ss_pred HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCc
Confidence 999987655 5999999998743 3667788764 2331443 34578999999999732 23599999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+||||.+.+ +++|.++|+++|+++|+|++| .+..... ....+.+++++|++|.++.+..++|+++++ ++++
T Consensus 224 ~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~~~--~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~---~~~~ 295 (465)
T 3e9k_A 224 HFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVELY--LHDWGVDFACWCSYKYLNAGAGGIAGAFIH---EKHA 295 (465)
T ss_dssp CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCC--HHHHTCCEEEECSSSTTCCCTTCCCEEEEC---GGGT
T ss_pred ccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcCCc--hhhcCCCEEEECcccccccCCCceEEEEEc---HHHH
Confidence 999999999 899999999999999999999 4432221 112234588899999993223367898888 4554
Q ss_pred HHHHHhhc-------------------------cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccC
Q 015890 253 TQLLKVQD-------------------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 253 ~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+.+..... ....+++.....++.++++...+. +++.+++..++++++.+.|+++
T Consensus 296 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 296 HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 43321110 011256677777777777653332 6778888888888888888763
Q ss_pred ----------CCCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHH
Q 015890 307 ----------GEGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDC 370 (398)
Q Consensus 307 ----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~ 370 (398)
+++++..+. .+.++++.++. +..++.+.|. ++||.+.. ..+++||+++ +. .+.+++
T Consensus 376 ~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---~~~~l~~~L~-~~Gi~v~~----~~~~~iRis~~~~~~t~edi 447 (465)
T 3e9k_A 376 YGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---PNKDVFQELE-KRGVVCDK----RNPNGIRVAPVPLYNSFHDV 447 (465)
T ss_dssp CC---------CEEECSCSSGGGBCSCEEEEECC---TTCCHHHHHH-TTTEECEE----ETTTEEEEBCCTTTCCHHHH
T ss_pred ccccccccCCCCeEEeCCCCHhhcccEEEEEecC---CHHHHHHHHH-HCCEEEec----CCCCEEEEeCcccCCCHHHH
Confidence 444666554 26677777762 3456777775 78999873 3578999998 44 789999
Q ss_pred HHHHHHHHHHHHH
Q 015890 371 KAAADRLRRGLEE 383 (398)
Q Consensus 371 ~~~~~~l~~~~~~ 383 (398)
+++++.|++++++
T Consensus 448 ~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 448 YKFTNLLTSILDS 460 (465)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 183
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.97 E-value=1.7e-28 Score=229.72 Aligned_cols=281 Identities=17% Similarity=0.100 Sum_probs=206.4
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS 145 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 145 (398)
..++++.+++++ +. +++++++|+++|++.++.+++++||+|+++.++|++....+ +..|.+++.+ +.+
T Consensus 68 ~~~l~~~la~~~----g~--~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~- 139 (392)
T 3qhx_A 68 RTALEAALAAVE----DA--AFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV-ALA- 139 (392)
T ss_dssp HHHHHHHHHHHT----TC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE-CTT-
T ss_pred HHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe-CCC-
Confidence 344555555554 54 36889999999999999999999999999999998876655 6778999988 553
Q ss_pred CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
|++.+++++++++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++| ..+...+. ..+.+++
T Consensus 140 -----d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~~~---~~~~di~ 206 (392)
T 3qhx_A 140 -----DLDAVRAAIRPTT--RLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQPL---SLGADVV 206 (392)
T ss_dssp -----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCGG---GGTCSEE
T ss_pred -----CHHHHHHhhCCCC--eEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCChH---HhCCcEE
Confidence 8999999998754 99999999999999999 999999999999999999999 43322221 2235588
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+.|++|.+|.+| +++||++.++ +++.+.+.......+.+.++..++++...++. +..+.++..++..++.+.|
T Consensus 207 ~~S~sK~lg~~g~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~~~L 280 (392)
T 3qhx_A 207 LHSTTKYIGGHSDVVGGALVTND--EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVAEFL 280 (392)
T ss_dssp EEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH
T ss_pred EEcCccccCCCCCceEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHH
Confidence 999999998766 7899999885 67888887766656677788888887777765 4455666777777888888
Q ss_pred ccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-------------
Q 015890 304 SPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------------- 353 (398)
Q Consensus 304 ~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------------- 353 (398)
++.+.+. +..|. .+..+++.++........++..+ +..++.+..|+.+.
T Consensus 281 ~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~ 359 (392)
T 3qhx_A 281 AEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKT-NIFILAESLGSVESLIEHPSAMTHAST 359 (392)
T ss_dssp HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHC-SSSEECSCCCCSSCEEECGGGTSCGGG
T ss_pred hcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhC-CCceECCCCCCCCceeeCccccccccc
Confidence 7765432 21110 15567788864222334455444 45677777776531
Q ss_pred -------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 354 -------CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 354 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
.++.||+|++. ++.+++++.|.+++
T Consensus 360 ~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 360 AGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp BTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 24679999997 45555666666554
No 184
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.97 E-value=1.6e-28 Score=230.33 Aligned_cols=319 Identities=19% Similarity=0.180 Sum_probs=225.9
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
.+++++..+.+.+ ++++.+++.+.+... .|. +..+..++++.+++++. . +++++++|+++|+..++.+
T Consensus 22 ~~~~~l~~~~p~~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~----~--~~~i~~~~gt~al~~~l~~ 90 (391)
T 3dr4_A 22 SDLPRISVAAPRL--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG----V--KHAIACNNGTTALHLALVA 90 (391)
T ss_dssp ------CCCCCCC--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT----C--SEEEEESSHHHHHHHHHHH
T ss_pred CCCceeccCCCCC--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC----C--CcEEEeCCHHHHHHHHHHH
Confidence 4678888887764 588899988877653 344 56778899999999883 3 3788999999999999999
Q ss_pred h-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 109 L-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 109 l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+ +++||+|+++.|+|+++...++..|.+++.+ +.+.+++.+|++.+++.+++++ ++|+ ++||||...+ ++
T Consensus 91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--~~v~---~~n~tG~~~~---~~ 161 (391)
T 3dr4_A 91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLV-DNDPRTFNLDAAKLEALITPRT--KAIM---PVHLYGQICD---MD 161 (391)
T ss_dssp HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGSGGGCCTTE--EEEC---CBCGGGCCCC---HH
T ss_pred cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEE-ecCccccCcCHHHHHHhcCCCc--eEEE---EECCCCChhh---HH
Confidence 9 8999999999999999999999999999999 8876667889999999998654 7777 5689999988 89
Q ss_pred HHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890 188 RISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~ 262 (398)
+|.++|+++|+++|+|++| + .+.+...... .+ +++.|++ |.++ |.+.|+++.++ +.+.+.+.......
T Consensus 162 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-~d--i~~~S~s~~K~l~--~g~gg~~~~~~--~~~~~~~~~~~~~g 234 (391)
T 3dr4_A 162 PILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-GD--CATFSFFGNAIIT--TGEGGMITTND--DDLAAKMRLLRGQG 234 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECBTTSSSC--CBSCEEEEESC--HHHHHHHHHHHBTT
T ss_pred HHHHHHHHcCCEEEEECcccccceECCeeeccc-CC--EEEEECCCCCcCC--cCCeEEEEECC--HHHHHHHHHHHhcC
Confidence 9999999999999999999 3 2333221111 23 5556655 8775 45688988875 66777766544211
Q ss_pred --------------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-------CccEEEE
Q 015890 263 --------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-------EGAIYLW 321 (398)
Q Consensus 263 --------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------~~~~~~~ 321 (398)
.+..+....++....+ ..+++..++.+++.+++.+.|++.+. .+..+ .....++
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~ 309 (391)
T 3dr4_A 235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQL----ERVDEHLAARERVVGWYEQKLARLGN-RVTKPHVALTGRHVFWMYT 309 (391)
T ss_dssp CCTTSTTCCSSCCCBCBCCHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHGGGTT-SEECCCCCTTSCCCCSSEE
T ss_pred CCCCCcccccccccccCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCc-cccCcCCCCCCcceeEEEE
Confidence 1223333333322222 23456667777788888888887733 44433 1122345
Q ss_pred eeCCCC-CCChHHHHHHHHHhcCeEEecCCCC---C-----------------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 322 ARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---G-----------------CRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 322 ~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~---~-----------------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+.++.. ..+..++.+.|. ++||.++++... . ....+|+++.. .+++|++++++.|++
T Consensus 310 i~~~~~~~~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 310 VRLGEGLSTTRDQVIKDLD-ALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp EEECSSCSSCHHHHHHHHH-HTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred EEECCccchhHHHHHHHHH-HCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 566531 235778888775 789999988521 0 12479999888 899999999999876
Q ss_pred HH
Q 015890 380 GL 381 (398)
Q Consensus 380 ~~ 381 (398)
++
T Consensus 389 ~l 390 (391)
T 3dr4_A 389 VL 390 (391)
T ss_dssp TC
T ss_pred Hh
Confidence 53
No 185
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=1.4e-29 Score=239.96 Aligned_cols=326 Identities=14% Similarity=0.101 Sum_probs=220.5
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.++||..|. ++++ .||++.+++.+++.+.....| ..++++.+++.+.+.++ .+++|++++|+++|+.
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~ 122 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATM 122 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 3578899999875 3444 689999999999876322222 34566777777776665 5789999999999999
Q ss_pred HHHHH---hccCCCEEEEeCCCCcChhhHHH-h-------------cCc------EEEEeccCCCCCCCCChHHHHHhhc
Q 015890 104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 104 ~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
.+++. +. ++++|++++|+|+++...+. . .|+ .++.+ +. .|++.|++.++
T Consensus 123 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~ 194 (424)
T 2e7u_A 123 SALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL-EY------NDPEGLREVLK 194 (424)
T ss_dssp HHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEE-CT------TCHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeC-CC------CCHHHHHHHHH
Confidence 99986 44 45889999999988654322 1 121 23333 21 38899999987
Q ss_pred cC-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890 161 TK-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236 (398)
Q Consensus 161 ~~-~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (398)
.. ..+++|+++..+++||.+. +++++++|.++ ++||+++|+||+| + ..+........+....+.|+||.++ +|
T Consensus 195 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G 271 (424)
T 2e7u_A 195 RRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILG-GG 271 (424)
T ss_dssp HHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TT
T ss_pred hCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhh-CC
Confidence 31 1135555543344589765 79999999999 9999999999999 5 3332211111011111338999998 69
Q ss_pred ceeEEEEccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCC
Q 015890 237 WRVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG 309 (398)
Q Consensus 237 ~r~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~ 309 (398)
+|+||++++ +++++.+.... ...+++.|+++++++.++|+...+ .++..+++.++.+++.+.|++ .+..
T Consensus 272 ~~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 347 (424)
T 2e7u_A 272 LPAAAYAGR---REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLKEVLKEKGLP 347 (424)
T ss_dssp SSCEEEEEC---HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cceEEEEEc---HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999 77777665421 234567788888888888874211 134455566666666666654 3543
Q ss_pred ccccCCccEEEEeeCCCCC------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 377 (398)
....+. ++++|+.++... ....++...|+ ++||.+.++. ...+|+++. .+++++++++++|
T Consensus 348 ~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~~i~~~l~~l 420 (424)
T 2e7u_A 348 HTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN----FEAAFLSVA-HREEDVEKTLEAL 420 (424)
T ss_dssp CEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS----SSCEECCTT-CCHHHHHHHHHHH
T ss_pred eEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC----CCceEeecc-CCHHHHHHHHHHH
Confidence 333444 678888886411 12346777776 7999999875 235777755 5999999999999
Q ss_pred HHH
Q 015890 378 RRG 380 (398)
Q Consensus 378 ~~~ 380 (398)
.++
T Consensus 421 ~~~ 423 (424)
T 2e7u_A 421 RKA 423 (424)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 186
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=4.9e-28 Score=226.53 Aligned_cols=286 Identities=22% Similarity=0.189 Sum_probs=204.8
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 141 (398)
+.++..++++.+++++ +.+ +.|++++| ++++..++.++.++||+|+++.|+|++.... ++..|.+++.+
T Consensus 50 ~~~~~~~l~~~la~~~----~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~- 122 (386)
T 1cs1_A 50 GNPTRDVVQRALAELE----GGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV- 122 (386)
T ss_dssp CCHHHHHHHHHHHHHH----TCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-
T ss_pred CCccHHHHHHHHHHHh----CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEe-
Confidence 3445577888888887 443 55666554 8999999999999999999999999875443 36778898888
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD 220 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~ 220 (398)
+.+ |++.+++.+++++ ++|++++|+||||.+++ +++|.++|+++|+++|+||+| ....... ...+
T Consensus 123 ~~~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~ 188 (386)
T 1cs1_A 123 DQG------DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQNP---LALG 188 (386)
T ss_dssp CTT------CHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCG---GGGT
T ss_pred CCC------CHHHHHHhhccCC--cEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---cccC
Confidence 542 8899999998654 99999999999999998 999999999999999999999 2221111 1235
Q ss_pred cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
.++++.|+||.++.+|.++ ||+++++ +++++.+......++.+.++..++++...++. +....+...++.+.+
T Consensus 189 ~di~~~s~sK~~~~~~~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l 262 (386)
T 1cs1_A 189 ADLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAI 262 (386)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcccccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHH
Confidence 6788999999998888886 9999884 47888887666554556677777776666653 445556667777777
Q ss_pred HHHhccCCCCccc-c----------------CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-----------
Q 015890 300 REALSPLGEGAVK-G----------------GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA----------- 351 (398)
Q Consensus 300 ~~~l~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----------- 351 (398)
.+.|++++.+... . ...+.++.+.++. ...++.. ++.++||.+++.+.
T Consensus 263 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~l~~~gi~~~~~~~g~~~sl~~~~~ 338 (386)
T 1cs1_A 263 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRR-FLGGLSLFTLAESLGGVESLISHAA 338 (386)
T ss_dssp HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHH-HHHTCSSSEEBSCCCSSSCEEEEGG
T ss_pred HHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHH-HHHhCCcceEcccCCCcceeeeccc
Confidence 7777765432111 0 0115556666653 2344555 45689999974211
Q ss_pred ----C----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 352 ----C----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 352 ----~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+ + .++++|++++. ++.++.+++|.++++++.
T Consensus 339 ~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 339 TMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp GTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHT
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHhh
Confidence 0 1 24799999997 555666777777776654
No 187
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.97 E-value=2.3e-28 Score=229.59 Aligned_cols=280 Identities=19% Similarity=0.180 Sum_probs=196.5
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (398)
+...++++.+++++ +.+ +.++++++++|+..++.+++++||+|+++.|+|+++...+ +..|.+++.+ +.
T Consensus 65 ~~~~~l~~~la~~~----g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~ 137 (398)
T 1gc0_A 65 PTLNLLEARMASLE----GGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DM 137 (398)
T ss_dssp HHHHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CT
T ss_pred hHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CC
Confidence 34445555555554 543 5566666689999999999999999999999999877665 6678998888 54
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
+ |++.+++.++++ +++|++++|+||||.+++ +++|.++|+++|+++|+|++| ....+.+. ..+.+
T Consensus 138 ~------d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~~---~~~~d 203 (398)
T 1gc0_A 138 A------DLQALEAAMTPA--TRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRPL---ELGAD 203 (398)
T ss_dssp T------CHHHHHHHCCTT--EEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCGG---GGTCS
T ss_pred C------CHHHHHHhcCCC--CeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhCce
Confidence 2 799999999875 499999999999999998 999999999999999999999 33222221 23456
Q ss_pred EEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890 223 VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 299 (398)
+++.|+||.++.+|.|+ |+++++ ++.++ .+...... .+.+.+++.++++...++. +..+.+...++...+
T Consensus 204 ~~~~S~sK~~~~~~~~~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l 276 (398)
T 1gc0_A 204 LVVHSATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVL 276 (398)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred EEEECCccccCCCCCCeEEEEEEC---hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence 88999999999888887 999988 56555 55555444 4566788888877777764 344555566666667
Q ss_pred HHHhccCCCC--------------ccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CCC------C-
Q 015890 300 REALSPLGEG--------------AVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGA------C- 352 (398)
Q Consensus 300 ~~~l~~~~~~--------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~------~- 352 (398)
.+.|++++.+ .+..+ ..+.++.+.++. ..+....++.+.|+.++. |+. +
T Consensus 277 ~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~ 352 (398)
T 1gc0_A 277 AEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPA 352 (398)
T ss_dssp HHHHHTCTTEEEEEEC----------------CCTTEEEEEETT----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGG
T ss_pred HHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC----CHHHHHHHHHhCCCceeccCCCCcceeeeccc
Confidence 7766654421 11111 125556667652 234455566788988876 321 1
Q ss_pred ---------------C-CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 353 ---------------G-CRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 353 ---------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+ .++.||+|++. .++++++.+.++|.+
T Consensus 353 ~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 353 SMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp GTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 1 14799999998 444555555555543
No 188
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=2.1e-28 Score=224.30 Aligned_cols=275 Identities=17% Similarity=0.097 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT 147 (398)
Q Consensus 72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~ 147 (398)
++++.+++++ +.+ +.+ +++++++++..++.++.++||+|+++.|+|+++...+ +..|.+++.+ +.
T Consensus 2 ~l~~~la~~~----g~~-~~i-~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~---- 70 (331)
T 1pff_A 2 ALEGKIAKLE----HAE-ACA-ATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DM---- 70 (331)
T ss_dssp HHHHHHHHHH----TCS-EEE-EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT----
T ss_pred hHHHHHHHHh----CCC-eEE-EeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEe-CC----
Confidence 5778888877 544 444 5555589999999999999999999999998876654 4589999888 54
Q ss_pred CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~-~~~~livDe~~-~~~~~~~~~~~~~~~~i~~ 225 (398)
.|++.+++.++++ +++|++++|+||||.+++ +++|.++|++ +|+++|+|++| .+....+. ..+.++++
T Consensus 71 --~d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~d~~~ 140 (331)
T 1pff_A 71 --AVPGNIEKHLKPN--TRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTNPL---DLGVDIVV 140 (331)
T ss_dssp --TSTTHHHHTCCTT--EEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCCGG---GGTCSEEE
T ss_pred --CCHHHHHHhhcCC--CeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCChh---hcCCcEEE
Confidence 3788999999865 499999999999999998 9999999999 99999999999 32212111 23567899
Q ss_pred cccccccCCCcce-eEEEEccCCcH-HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMGWR-VGYIAYPSEVE-GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 302 (398)
Q Consensus 226 ~s~sK~~~~~G~r-~G~i~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (398)
.|+||.++.+|.| +||++++ + ++++.+...... .+.+.+++.+.++...++. ...+.+....+.+.+.+.
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~ 213 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAEF 213 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeC---cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHHHHHH
Confidence 9999999989999 7999998 6 888888877665 4556777777766666653 222223333333333333
Q ss_pred hcc--------------CCCCccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC---------CC----
Q 015890 303 LSP--------------LGEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------AC---- 352 (398)
Q Consensus 303 l~~--------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~---- 352 (398)
+++ .+...+..+ ..+.++.+.+. +..++.. +++++||.+++.+ .|
T Consensus 214 l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~l~~~gI~~~~~s~g~~~sl~~~~~~~~ 288 (331)
T 1pff_A 214 LHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKK-VLDNCHVVSLAVSLGGPESLIQHPASMT 288 (331)
T ss_dssp HHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHH-HHHTCSSSEECSSCCSSSCEEECHHHHT
T ss_pred HHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHH-HHHhCCCceeccCCCCcceeeecchhhc
Confidence 322 222222211 12556667765 3445555 4568999887653 11
Q ss_pred ------------C-CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 353 ------------G-CRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 353 ------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+ .++.+|++++. .++++++.+++.|.+
T Consensus 289 ~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 289 HAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp STTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1 15799999998 566677776666654
No 189
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1.7e-28 Score=231.74 Aligned_cols=283 Identities=18% Similarity=0.180 Sum_probs=201.1
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS 145 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~ 145 (398)
..++++.+++++ |.+ +.+++ ++++++++.++.+++++||+|+++.+.|++.... ++..|++++.+ +.+
T Consensus 116 ~~~l~~~lA~l~----g~~-~~v~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~- 187 (445)
T 1qgn_A 116 TVVLEEKISALE----GAE-STLLM-ASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DPA- 187 (445)
T ss_dssp HHHHHHHHHHHH----TCS-EEEEE-SCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CSS-
T ss_pred HHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC-
Confidence 345666666654 553 44555 5555999999999999999999999999876653 46679999988 542
Q ss_pred CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN 224 (398)
Q Consensus 146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~ 224 (398)
|+++|++.+++++ +++|++++|+||||.+.+ +++|+++|+++|+++|+|++| .++...+ ...+.+++
T Consensus 188 -----d~~~l~~ai~~~t-v~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~~---~~~g~Div 255 (445)
T 1qgn_A 188 -----DVGALELALNQKK-VNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQKA---LALGADLV 255 (445)
T ss_dssp -----CHHHHHHHHHHSC-EEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCT---TTTTCSEE
T ss_pred -----CHHHHHHHhccCC-CCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---cccCCEEE
Confidence 8999999998754 499999999999999999 899999999999999999999 4332211 22345688
Q ss_pred EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890 225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303 (398)
Q Consensus 225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 303 (398)
+.|+||.+|..| .++|+++++ +++++.+.........+.++...+++...++. +..+.+.+.+++.++.+.|
T Consensus 256 ~~S~sK~~gg~gd~~~G~l~~~---~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L 328 (445)
T 1qgn_A 256 LHSATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEIL 328 (445)
T ss_dssp EECTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHH
T ss_pred EECCcccccccccceEEEEEEC---HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Confidence 999999998544 468999998 78888776655433444555555555555553 4455566677788888888
Q ss_pred ccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-------------
Q 015890 304 SPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------------- 353 (398)
Q Consensus 304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------------- 353 (398)
++.+.+ .+..| ..+.++++.++....+...++..+ +..++.++.|..+.
T Consensus 329 ~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~ 407 (445)
T 1qgn_A 329 EAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDL 407 (445)
T ss_dssp HTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCSSSCEEECHHHHHSTTS
T ss_pred hcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhC-CCceEeccCCCCceeeecccccccccC
Confidence 887654 33332 135677778763111123333332 22367777776542
Q ss_pred ----------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890 354 ----------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 ----------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~ 383 (398)
.++.||+|++. |+++.+++.|.++++.
T Consensus 408 ~~~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 408 SQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS 444 (445)
T ss_dssp CHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 14689999994 6799999999988864
No 190
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.96 E-value=4.5e-28 Score=230.62 Aligned_cols=361 Identities=15% Similarity=0.120 Sum_probs=235.3
Q ss_pred HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHHHhh
Q 015890 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKKLNQ 83 (398)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~l~~ 83 (398)
++...+.+.+..+.+......+.+.|..+.+. ++|.|++++...+.+....+|+. .....++++..++++++
T Consensus 34 ~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 34 SLSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHHcCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 44456666676666666555677888875544 68999999998876543233432 12234677666677888
Q ss_pred hcCCCCCc---EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh--------HHHhcCc--EEEEeccCCCCCCCC
Q 015890 84 ENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--------SFQMTGV--THILVGPCSSKTLHP 150 (398)
Q Consensus 84 ~~~~~~~~---v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~ 150 (398)
++|.+.+. .++++|+++|+..++.+++++||+|+++.+.|.++.. .+...|. +++.+ +.+++++.+
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~-~vd~~~~~i 190 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI 190 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec-ccccccCCc
Confidence 88887653 3556688999999999999999999999998865421 2233453 44455 555555789
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s 227 (398)
|+|++++.++... +++|++..++||+ ..+ +++|.++|+++|+++++|++| +.+.+....... ..++++.|
T Consensus 191 D~d~le~~l~~~~-~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv~~S 263 (490)
T 2a7v_A 191 DYNQLALTARLFR-PRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIVTTT 263 (490)
T ss_dssp CHHHHHHHHHHHC-CSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEE
T ss_pred CHHHHHHHHhhcC-CcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-CCCEEEEC
Confidence 9999999997422 4898888888864 566 999999999999999999998 233333222222 24588899
Q ss_pred cccccCCCcceeEEEEccCCcH------------HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHH
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQDN-IPICASIISQHLALYSLQTG-PEWVTERVKDLV 293 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 293 (398)
+||.++ |.+.|++++++.+. ++.+.++..... ...+++...++++..++... .+.++++.++..
T Consensus 264 ~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~ 341 (490)
T 2a7v_A 264 THKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL 341 (490)
T ss_dssp SSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999984 66779999885310 245555544322 22344555555555555431 234577888899
Q ss_pred HHHHHHHHHhccCCCCcccc-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC---
Q 015890 294 RNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG--- 364 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~--- 364 (398)
++++++.+.|.+.|. .+.. +...+++|+++.....+..++... |++.||.+..+..++ .++.||++...
T Consensus 342 ~na~~L~~~L~~~G~-~v~~~~t~t~lv~vdl~~~g~~~~~~~~~-L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~ 419 (490)
T 2a7v_A 342 KNARAMADALLERGY-SLVSGGTDNHLVLVDLRPKGLDGARAERV-LELVSITANKNTCPGDRSAITPGGLRLGAPALTS 419 (490)
T ss_dssp HHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECTTTTCCHHHHHHH-HHHTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred HHHHHHHHHHHHcCc-EEecCCCCCeEEEEEeCCCCCCHHHHHHH-HHhCCeEEecCccCCCCCCCCCCceEeccccccc
Confidence 999999999988765 5543 344678888886544456666554 468999998654332 25789997532
Q ss_pred --CCHHHHHHHHHHHHHHHHHH
Q 015890 365 --LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 365 --~~~~~~~~~~~~l~~~~~~~ 384 (398)
.+++|++++++.|.+++...
T Consensus 420 ~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 420 RQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 47899999999999888643
No 191
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=1e-28 Score=229.55 Aligned_cols=302 Identities=17% Similarity=0.197 Sum_probs=223.6
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY 122 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~ 122 (398)
.++++.+++.+.+... .|.+.++..++++.+++++ +. +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus 14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~ 84 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV----GA--KYCISCANGTDALQIVQMALGVGPGDEVITPGFT 84 (367)
T ss_dssp HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCc
Confidence 4678888888877653 3556677888999999988 33 47999999999999999999 8999999999999
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|+++...++..|.+++.+ +.+++.+.+|++.+++.+++++ ++|+ |+||+|...+ +++|.++|+++|+++|+
T Consensus 85 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 85 YVATAETVALLGAKPVYV-DIDPRTYNLDPQLLEAAITPRT--KAII---PVSLYGQCAD---FDAINAIASKYGIPVIE 155 (367)
T ss_dssp CTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEE
T ss_pred cHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHhcCcCC--cEEE---eeCCccChhh---HHHHHHHHHHcCCEEEE
Confidence 999999999999999999 8887767899999999997654 7777 7789999888 99999999999999999
Q ss_pred eece-e--ccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCCC
Q 015890 203 DNTY-F--MYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC 265 (398)
Q Consensus 203 De~~-~--~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~------------~~~~ 265 (398)
|++| + .+.+...... + ++++.|+ +|.++.+|. .|+++.++ +++.+.+...... .++.
T Consensus 156 D~a~~~g~~~~~~~~~~~-~--di~~~Sf~~~K~l~~~g~-gg~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~g~~~~ 229 (367)
T 3nyt_A 156 DAAQSFGASYKGKRSCNL-S--TVACTSFFPSAPLGCYGD-GGAIFTND--DELATAIRQIARHGQDRRYHHIRVGVNSR 229 (367)
T ss_dssp ECTTTTTCEETTEETTSS-S--SEEEEECCTTSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTEEETTEECSCCCBCC
T ss_pred ECccccCCeECCeeccCC-C--CEEEEECCCCCcCCCcCc-eeEEEeCC--HHHHHHHHHHHhcCCCcCceeeccCcCCC
Confidence 9998 3 3333322222 1 4777786 899985576 78888865 7788777665431 2455
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCcc----EEEEeeCCCCCCChHHHHHHHHH
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGA----IYLWARLPEKHLDDFEVVRWLAH 340 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~ll~ 340 (398)
.+....+++...++. +++..++.+++.+++.+.|++.+. .+. .+.+. ..+.+.++ +..++...| +
T Consensus 230 ~~~~~aa~~~~~l~~----~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~ 299 (367)
T 3nyt_A 230 LDTLQAAILLPKLEI----FEEEIALRQKVAAEYDLSLKQVGI-GTPFIEVNNISVYAQYTVRMD----NRESVQASL-K 299 (367)
T ss_dssp CCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTEECCCSSEEEECS----SHHHHHHHH-H
T ss_pred ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCe-eccCCCCCCceeeEEEEEEeC----CHHHHHHHH-H
Confidence 666666666666654 345555666667777777777653 222 12211 22334443 466777766 5
Q ss_pred hcCeEEecCCCC--------C-C-----------CCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 341 RHGVVVIPGGAC--------G-C-----------RGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 341 ~~gi~v~~g~~~--------~-~-----------~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
++||.++++... . . ...+|+++.. .+++|+++.++.|++
T Consensus 300 ~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 300 AAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp HHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred HCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 889999876531 0 0 2479999888 899999988888764
No 192
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=4.8e-29 Score=232.72 Aligned_cols=324 Identities=12% Similarity=0.106 Sum_probs=230.2
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~ 123 (398)
++|++++++...+.+...+. ......++.+.+++.+.+.++.+ +.+++++|+|++++.++..+ ++||+|+++.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~h--~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~ 84 (379)
T 3ke3_A 9 IDPNGLLEYSVVYTDRALNH--MSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGW 84 (379)
T ss_dssp CSTTSCCCCCSSCCTTSCCT--TSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSH
T ss_pred CCHHHHHHHHHhccCCCCCC--CCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCc
Confidence 45666666655444433222 23344567777788887777876 67999999999999988654 6899999999999
Q ss_pred cChh--hHHHhcC--cEEEEeccCCCCC--------CCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 124 FNSY--MSFQMTG--VTHILVGPCSSKT--------LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 124 ~~~~--~~~~~~g--~~~~~~~~~~~~~--------~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
++.. ..++..| .+++.+ +.+..+ ..+|++++++.++ ++ +++|++.+++|++|.++|.+++++|.
T Consensus 85 ~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~--~~~v~~~~~~~~~G~~~~~~~l~~i~ 161 (379)
T 3ke3_A 85 FSYRWTQILEKGKFAKSSTVL-TAERTEDTEAPKPFAPVDIETAVAKIKEDK--SAIVYAPHVETSSGIILSEEYIKALS 161 (379)
T ss_dssp HHHHHHHHHHHHCCSSEEEEE-ECEESSCCSSCCCEECCCHHHHHHHHHHHT--CSEEEEESEETTTTEECCHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCceEEE-eccccccccccCCCCCCCHHHHHHHHhhcC--CcEEEEEeecCCCceeCCHHHHHHHH
Confidence 7743 4455566 477777 553311 2479999999996 34 48999999999999999999999999
Q ss_pred HHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------
Q 015890 191 DLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------- 259 (398)
Q Consensus 191 ~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----------- 259 (398)
++|+++|+++|+|+++. .+.+......+.++++.|++|+++ ++.++|+++++ +++++.+....
T Consensus 162 ~~~~~~~~~li~D~~~~--g~~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 235 (379)
T 3ke3_A 162 EAVHSVGGLLVIDCIAS--GCVWLDMKELGIDVLISAPQKGWS-STPCAGLVMLS---AAAIKKVESTESNCFSLDLKQW 235 (379)
T ss_dssp HHHHHTTCEEEEECTTC--TTCCCCHHHHTCSEEEECTTTTTC-SCCCEEEEEEC---HHHHHHHHTCCCSCSTTCHHHH
T ss_pred HHHHHcCCEEEEEeccc--CCccccccccCCCEEEecchhhcC-CCCceEEEEEC---HHHHHhhhcCCCCceeecHHHH
Confidence 99999999999999974 233222222245588899999986 33458999998 77777765311
Q ss_pred --------c---cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeC
Q 015890 260 --------D---NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARL 324 (398)
Q Consensus 260 --------~---~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~ 324 (398)
. .+.++.+.+.++++.++++...+ .+++..++.+++++++++.|++++. .+..+. ......+..
T Consensus 236 ~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~ 314 (379)
T 3ke3_A 236 LTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGI-ESVAAEGFEAPGVVVSYT 314 (379)
T ss_dssp HHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSBCTTCBCSSEEEEEC
T ss_pred HHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC-EecCCccccCceEEEEcc
Confidence 0 01237788888888888875222 2577788888899999999988865 444332 122233333
Q ss_pred CCCCCChHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+. ........| .++||.+.+|..|.. .+.+||+++. .+++|+++++++|+++++++.
T Consensus 315 ~~---~~~~~~~~L-~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 315 ER---DDMHKGSAF-AEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SC---HHHHSSHHH-HHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CC---cchHHHHHH-HHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 31 122224444 588999999876532 6789999987 788999999999999998765
No 193
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=1.2e-27 Score=223.82 Aligned_cols=281 Identities=16% Similarity=0.169 Sum_probs=200.3
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEecc
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGP 142 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 142 (398)
.+...++++.+++++ +.+ +.++++|+++|+..++.+++++||+|+++.|+|++.... ++..|.+++.+ +
T Consensus 58 ~~~~~~l~~~la~~~----g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~ 130 (389)
T 3acz_A 58 NPTVEQFEEMVCSIE----GAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI-D 130 (389)
T ss_dssp CHHHHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE-C
T ss_pred ChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C
Confidence 334456666666665 543 566777788999999999999999999999999886655 57789999988 5
Q ss_pred CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
. .|++.+++.+++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++| ..+...+. ..+.
T Consensus 131 ~------~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~~~---~~~~ 196 (389)
T 3acz_A 131 T------SDVEKVKAAWKPNT--KMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLKPL---ELGA 196 (389)
T ss_dssp T------TCHHHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCGG---GTTC
T ss_pred C------CCHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccCcc---ccCC
Confidence 4 38999999998754 99999999999999999 999999999999999999999 33322222 2346
Q ss_pred EEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
++++.|++|.++.+|.|+ ||+++++ +++++.+.........+.++..++++...++. +..+.+...++...+.
T Consensus 197 di~~~S~sK~~~~~~~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~~~~l~ 270 (389)
T 3acz_A 197 DIALHSVSKYINGHGDVIGGVSSAKT--AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT----LPIRMQIHMENGLKVA 270 (389)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred eEEEECChhhccCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH----HHHHHHHHHHHHHHHH
Confidence 688999999999899998 9999983 27888777665434555677777777777764 2333444445555555
Q ss_pred HHhccCCC--------------CccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---C------CCCC-
Q 015890 301 EALSPLGE--------------GAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G------GACG- 353 (398)
Q Consensus 301 ~~l~~~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g------~~~~- 353 (398)
+.|++.+. ..+..+ ..+.++.+.++. .+....++.+.||.+++ | ..|.
T Consensus 271 ~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-----~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~ 345 (389)
T 3acz_A 271 KFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-----FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPAS 345 (389)
T ss_dssp HHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-----HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTT
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-----HHHHHHHHHhCCCcEECcCCCCcccEeeCCcc
Confidence 55544321 111111 114556667652 23444566788998877 3 2221
Q ss_pred ----------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 354 ----------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 354 ----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.++.||+|++. ++.+++++.|.++++
T Consensus 346 ~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 346 MTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp TTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred cccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 14799999997 366677777777764
No 194
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=1.7e-28 Score=228.70 Aligned_cols=308 Identities=14% Similarity=0.150 Sum_probs=220.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY 122 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~ 122 (398)
.++++.+++.+.+... .|.+..+..++++.+++++. . +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus 15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~----~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~ 85 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN----V--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNT 85 (373)
T ss_dssp HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT----S--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTS
T ss_pred CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC----C--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 4678888888877653 35567778899999999883 3 47999999999999999999 8999999999999
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|+++...++..|++++.+ +.+++++.+|++++++.+++++ ++|+ ++||||...+ +++|.++|+++|+++|+
T Consensus 86 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~--~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 86 FIATALAVSYTGAKPIFV-EPDIRTYNIDPSLIESAITEKT--KAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp CTHHHHHHHHHSCEEEEE-CEETTTTEECGGGTGGGCCTTE--EEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHcCCEEEEE-eccccccCcCHHHHHHhcCCCC--eEEE---EECCCcCccc---HHHHHHHHHHcCCEEEE
Confidence 999999999999999999 8776667889999999998754 7777 6789999998 88999999999999999
Q ss_pred eece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCCC
Q 015890 203 DNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC 265 (398)
Q Consensus 203 De~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~------------~~~~ 265 (398)
|++| + .+++...... . ++++.|++ |.++.+| +.|+++.++ +++.+.+...... .++.
T Consensus 157 D~a~~~g~~~~~~~~~~~-~--d~~~~S~~~~K~l~~~g-~gg~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 230 (373)
T 3frk_A 157 DAAQAHGSLYKGMKVGSL-G--DAAGFSFYPAKNLGSLG-DGGAVVTND--KDLAEKIKALSNYGSEKKYHHIYKGFNSR 230 (373)
T ss_dssp ECTTCTTCEETTEETTSS-S--SEEEEECCTTSSSCCSS-SCEEEEESC--HHHHHHHHHHHBTTCSBTTBCCSCCCBCC
T ss_pred ECCcccCCEECCEecccc-c--cEEEEeCcCCCccCccc-eeEEEEeCC--HHHHHHHHHHHhcCcccCCccccccccCC
Confidence 9999 3 2333222211 2 36677766 9987424 378888875 5677777654431 1222
Q ss_pred cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEE--eeCCCCCCChHHHHHHHHHhc
Q 015890 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLW--ARLPEKHLDDFEVVRWLAHRH 342 (398)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ll~~~ 342 (398)
.+....++....++ .+++..++.+++.+++.+.|++++ +.+... .+....+ +.+.. .+..++...|. ++
T Consensus 231 ~~~~~aa~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~-~~ 302 (373)
T 3frk_A 231 LDELQAGFLRVKLK----YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS--EKRDELQKYLN-NN 302 (373)
T ss_dssp CCHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE--SSHHHHHHHHH-HT
T ss_pred CCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe--CCHHHHHHHHH-HC
Confidence 34444443333333 245666777788888999998876 344321 2121111 11111 14667777764 78
Q ss_pred CeEEecCCCCC---C--------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 343 GVVVIPGGACG---C--------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 343 gi~v~~g~~~~---~--------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
||.++++.... . .+.+|++++. .+++|++++++.|++...+
T Consensus 303 gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 303 GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 99998765210 0 1579999998 8999999999998876544
No 195
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=5.5e-27 Score=221.13 Aligned_cols=301 Identities=20% Similarity=0.133 Sum_probs=206.2
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890 42 WQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (398)
Q Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~ 119 (398)
++.++.+.+++. .. ..+.|+.. +...++++.+++++ +. +++++++|+++|++.++.+++++||+|+++
T Consensus 32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~al~~l~~~gd~vi~~ 101 (412)
T 2cb1_A 32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALE----GA--LEAVVLASGQAATFAALLALLRPGDEVVAA 101 (412)
T ss_dssp CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEe
Confidence 344455555443 22 23556543 34556666666665 53 479999999999999999999999999999
Q ss_pred CCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890 120 APYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (398)
Q Consensus 120 ~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~ 195 (398)
.|+|++.... ++..|.+++.+ +. |+++|++.+++++ ++|++++|+||||.+.+ +++|.++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~-------~~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 102 KGLFGQTIGLFGQVLSLMGVTVRYV-DP-------EPEAVREALSAKT--RAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp TTCCHHHHHHHHHTTTTTTCEEEEE-CS-------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHcCCEEEEE-CC-------CHHHHHHHhccCC--eEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 9999876554 34578899888 54 3889999998754 99999999999999998 9999999999
Q ss_pred cCCEEEEeece-ec-cCCCccccccCCcEEEEcccccccCCCcceeEEEEccC-CcH-----------------------
Q 015890 196 AGSWLVVDNTY-FM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS-EVE----------------------- 249 (398)
Q Consensus 196 ~~~~livDe~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~-~~~----------------------- 249 (398)
+|+++|+|++| .. +...+ ...+.++++.|+||.++.+|.|+|+++..+ ...
T Consensus 169 ~~~~li~D~~~~~~~~~~~~---~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 245 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALCRP---LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRA 245 (412)
T ss_dssp HTCEEEEECGGGTTTTSCCG---GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGG
T ss_pred cCCEEEEECCCccccccCCc---cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccch
Confidence 99999999999 33 32221 123466889999999988999999987654 210
Q ss_pred -HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cC------------
Q 015890 250 -GFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GG------------ 314 (398)
Q Consensus 250 -~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~------------ 314 (398)
++.+.++... .......++...+.+...++. +.++.++..++.+++.+.|.+.+.+... .|
T Consensus 246 ~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~ 321 (412)
T 2cb1_A 246 RCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNAR 321 (412)
T ss_dssp GHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHH
Confidence 3444454433 212233445544444445543 3455556677888888888887665533 22
Q ss_pred ----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC---------CCC-----------------CCCeEEEEecC
Q 015890 315 ----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------ACG-----------------CRGHLRISFGG 364 (398)
Q Consensus 315 ----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~~-----------------~~~~iRi~~~~ 364 (398)
..+.++.+.+ . +...+.. ++++.||.+ .++ .|. .++.||+|++.
T Consensus 322 ~~~~~~~~iv~~~~-~---~~~~~~~-~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~ 395 (412)
T 2cb1_A 322 KYLASGGPILTLDL-G---DLERASR-FLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGL 395 (412)
T ss_dssp HHCSSSCSEEEEEC-S---SHHHHHH-HHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCS
T ss_pred HhCCCCceEEEEEe-C---CHHHHHH-HHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 1245666777 3 3444444 556889999 764 221 15789999998
Q ss_pred -CCHHHHHHHHHHHH
Q 015890 365 -LVEDDCKAAADRLR 378 (398)
Q Consensus 365 -~~~~~~~~~~~~l~ 378 (398)
.++++++.+.++|.
T Consensus 396 ~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 396 EDPLDLLALFEEALE 410 (412)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 55556666666554
No 196
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=3.1e-28 Score=228.90 Aligned_cols=325 Identities=11% Similarity=0.030 Sum_probs=219.1
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE-ecChHHHHHHHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQAFVNIVL 107 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~-~~g~t~a~~~~~~ 107 (398)
++.++|+.| +.++|+.+++++.+... .....+...+...++.+.+.+.+++.+|++ +++|++ ++|++++++.++.
T Consensus 39 ~~~~~~~~~--~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~ 115 (398)
T 2fyf_A 39 PRDGRFGSG--PSKVRLEQLQTLTTTAA-ALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAF 115 (398)
T ss_dssp CSSCBCCSS--SCCCCHHHHHGGGTTTT-TTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHH
T ss_pred cCCccccCC--CCCCCHHHHHHHhhcCC-CccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHH
Confidence 345666654 44678999999877311 111100111222345667777777777886 468998 9999999999999
Q ss_pred HhccCCCEEEEeCCCCcC-hhhHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 108 TLCDAGDSVVMFAPYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 108 ~l~~~gd~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
+++++| .+.+..+.|.. ....+... |.+++.+ +.+ ++...+. .++++ +++|++++|+||||.++|.+
T Consensus 116 ~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~g~~~~~-----~i~~~--~~~v~~~~~~nptG~~~~~~ 185 (398)
T 2fyf_A 116 GLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIII-TSD-PGSAPEP-----QTDPS--VDVIAWAHNETSTGVAVAVR 185 (398)
T ss_dssp HTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE-ECC-TTCCCCC-----CCCTT--CSEEEEESEETTTTEECCCC
T ss_pred HhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE-ecC-CCCCCCc-----cccCC--CCEEEEeCcCCCcceecchH
Confidence 998886 22333333311 12235555 7777777 666 4443332 14444 59999999999999999954
Q ss_pred HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---- 259 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---- 259 (398)
++ .++ +|+++|+|++| ....... .. +.+++++|+||++|++| ++||++++ +++++.+....
T Consensus 186 ~i---~~~---~~~~vivD~a~~~~~~~~~--~~--~~di~~~s~sK~~~~~g-g~g~l~~~---~~~~~~l~~~~~~~~ 251 (398)
T 2fyf_A 186 RP---EGS---DDALVVIDATSGAGGLPVD--IA--ETDAYYFAPQKNFASDG-GLWLAIMS---PAALSRIEAIAATGR 251 (398)
T ss_dssp CC---TTC---C-CEEEEECTTTTTTSCCC--GG--GCSEEEECTTSTTCSCS-SEEEEEEC---HHHHHHHHHHHHTTC
T ss_pred Hh---hhh---cCCeEEEEeccccCCcccC--cc--cCcEEEEecCcccCCCC-ceEEEEEC---HHHHHHhhcccccCC
Confidence 44 443 89999999999 3322111 11 13478899999999765 58999998 77777664321
Q ss_pred -----------------ccCCCCcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCcccc--C--Cc
Q 015890 260 -----------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKG--G--EG 316 (398)
Q Consensus 260 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~--~~ 316 (398)
.....+.+...+.++..+++...+. +++..++++++++++.+.|++++++++.. + .+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 331 (398)
T 2fyf_A 252 WVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRS 331 (398)
T ss_dssp CCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBC
T ss_pred CCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcC
Confidence 1223456777777777777642222 67788888999999999998875545553 3 23
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+.++++.++.+ .+..++.++|. ++||.+++|......+++||+++. .+++++++++++|++++++
T Consensus 332 ~~~~~~~~~~~-~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 332 QVVGTIDFVDD-VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp SSEEEEEECTT-SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCC-CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 34888888653 36778888886 669999987433235799999996 6899999999999988754
No 197
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.96 E-value=1.1e-27 Score=222.86 Aligned_cols=324 Identities=14% Similarity=0.134 Sum_probs=227.4
Q ss_pred cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH-HHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccC
Q 015890 35 LAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL-VKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDA 112 (398)
Q Consensus 35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l-~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~ 112 (398)
...+.|++++++++++++.+.+..+....| .+...++++++ ++++ + ..+++++++|+|+++..++.++ +++
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~----g-~~~~~v~~~sgt~al~~al~~l~~~~ 77 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIYTNY--GPINQRFEQTIMSGFF----Q-NRGAVTTVANATLGLMAAIQLKKRKK 77 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCCSSS--CHHHHHHHHHHHHHTS----T-TCSEEEEESCHHHHHHHHHHHHSCTT
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCcccC--CHHHHHHHHHHHHHHh----C-CCCeEEEeCCHHHHHHHHHHHcCCCC
Confidence 345678888899999999998876432212 34457788888 7776 4 2467899999999999999998 899
Q ss_pred CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 113 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
||+|+++.++|..+...++..|++++.+ +.+.+++.+|++.+++++ +++..+++|+ |+||+|...+ +++|.+
T Consensus 78 Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~ 150 (377)
T 3ju7_A 78 GKYALMPSFTFPATPLAAIWCGLEPYFI-DISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEE 150 (377)
T ss_dssp CCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHH
Confidence 9999999999999999999999999999 887667889999999998 5541137776 6788999998 888999
Q ss_pred HHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015890 192 LCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------- 261 (398)
Q Consensus 192 l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~------- 261 (398)
+|+ +|+++|+|++| ++ +.+........+..++..+.+|.++. | +.|+++.++ +++.+++......
T Consensus 151 la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~-g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~ 225 (377)
T 3ju7_A 151 LEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGI-G-EGGLIYSKN--EEDIQRIKRMGNFGFDTNRE 225 (377)
T ss_dssp HHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCC-B-SCEEEEESC--HHHHHHHHHHTBTTBCTTSC
T ss_pred HHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCC-C-CcEEEEECC--HHHHHHHHHHHhcCCCCCCc
Confidence 999 99999999999 33 23322211112333444455799974 4 578888776 7888887766542
Q ss_pred -----CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCc---c--EEEEeeCCCCCCC
Q 015890 262 -----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEG---A--IYLWARLPEKHLD 330 (398)
Q Consensus 262 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~---~--~~~~~~~~~~~~~ 330 (398)
..+.++....+.+...++. +....++.+++++++.+.|++++.+.. ..+.. . .|+.+.++.. .+
T Consensus 226 ~~~~g~~~~~~~~~aa~~~~~l~~----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 300 (377)
T 3ju7_A 226 CTMMGFNCKMSEYAAAIGIATMKK----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE-VR 300 (377)
T ss_dssp BCSSCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-SC
T ss_pred eeeccccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-hh
Confidence 2344555555555555543 455666667777777777777654211 11111 1 2344555532 24
Q ss_pred hHHHHHHHHHhcCeEEecCC--CCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 331 DFEVVRWLAHRHGVVVIPGG--ACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 331 ~~~~~~~ll~~~gi~v~~g~--~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
..++.+.| +++||.++.+. .++. ...||+.++. .+++|+++.++.|.+++..
T Consensus 301 ~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 301 NKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred HHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 66777776 58899998775 2210 2479999888 8999999999999877654
No 198
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=1.1e-28 Score=237.01 Aligned_cols=324 Identities=13% Similarity=0.076 Sum_probs=213.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-----C----CEE
Q 015890 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----G----DSV 116 (398)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~-----g----d~V 116 (398)
|++.+++.+.+... ...|++..+..++++.+++++ + .+++++++|+++|+..++.+++++ | |+|
T Consensus 53 ~~v~~a~~~~l~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~I 125 (467)
T 2oqx_A 53 GAVTQSMQAAMMRG-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMV 125 (467)
T ss_dssp SCCCHHHHHHTTSC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCE
T ss_pred HHHHHHHHHHhccC-cceeccCchhHHHHHHHHHHh----C--cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceE
Confidence 88888888887653 346777777888999999987 3 368999999999999999999887 8 898
Q ss_pred EEeCCCCcChhhHHHhcCcEEEEecc---CCC-----CCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHH
Q 015890 117 VMFAPYYFNSYMSFQMTGVTHILVGP---CSS-----KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERL 185 (398)
Q Consensus 117 l~~~p~~~~~~~~~~~~g~~~~~~~~---~~~-----~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt-G~~~~~~~ 185 (398)
++..+.|..+.......|..++.... .+. ..+.+|+++|++++++. .++++|++++|+||+ |.+++.++
T Consensus 126 i~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~ 205 (467)
T 2oqx_A 126 AFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLAN 205 (467)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHH
T ss_pred EecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHH
Confidence 77632223334445556666554301 111 23467999999999841 125999999999998 89999999
Q ss_pred HHHHHHHHHHcCCEEEEeece-e-----------ccCCCcccc------ccCCcEEEEcccccccCCC-cceeEEEEccC
Q 015890 186 LKRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCC------VEGDHVVNLFSFSKAYGMM-GWRVGYIAYPS 246 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~------~~~~~~i~~~s~sK~~~~~-G~r~G~i~~~~ 246 (398)
+++|+++|++||+++|+|+++ + .+.+..... ...+ +++.|+||.+|++ | ||+++++
T Consensus 206 l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~ 280 (467)
T 2oqx_A 206 LKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKD 280 (467)
T ss_dssp HHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECS
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecC
Confidence 999999999999999999766 4 344432211 1122 4578999999866 4 7888774
Q ss_pred C-cHHHHHHHHHhh---cc-C-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890 247 E-VEGFATQLLKVQ---DN-I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL 320 (398)
Q Consensus 247 ~-~~~~~~~l~~~~---~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 320 (398)
. .-+.+..+.... .. . ....+.....++...++...+ ++..+...++++.+.+.|++.+. .+. +.+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~-~~~-~~~~~~~ 356 (467)
T 2oqx_A 281 DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRIAQVQYLVDGLEEIGV-VCQ-QAGGHAA 356 (467)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTTC-CEE-EECSSCE
T ss_pred hhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh--HHHHHHHHHHHHHHHHHHHHCCC-eee-cCCceEE
Confidence 1 113444443322 10 0 112233333333333322111 12333445667777888876643 555 6667888
Q ss_pred EeeCCC--CCCC-----hHHHHHHHHHhcCeEEecCCCC--C-----------CCCeEEEEecC--CCHHHHHHHHHHHH
Q 015890 321 WARLPE--KHLD-----DFEVVRWLAHRHGVVVIPGGAC--G-----------CRGHLRISFGG--LVEDDCKAAADRLR 378 (398)
Q Consensus 321 ~~~~~~--~~~~-----~~~~~~~ll~~~gi~v~~g~~~--~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~ 378 (398)
|+.++. ...+ ...++.+|+.++||.+.|++.| + ..++||++++. .+++++++++++|.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~ 436 (467)
T 2oqx_A 357 FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFK 436 (467)
T ss_dssp EEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHH
T ss_pred EEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHH
Confidence 888742 1112 3345777756899999985532 1 13799999984 48899999999999
Q ss_pred HHHHHHh
Q 015890 379 RGLEELV 385 (398)
Q Consensus 379 ~~~~~~~ 385 (398)
+++++..
T Consensus 437 ~~l~~~~ 443 (467)
T 2oqx_A 437 HVKENAA 443 (467)
T ss_dssp HHHHSGG
T ss_pred HHHhhhh
Confidence 9998754
No 199
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=1.2e-27 Score=224.60 Aligned_cols=286 Identities=20% Similarity=0.222 Sum_probs=198.0
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG 141 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 141 (398)
+.++..++++.+++++ +.+ +.|++++| ++|+..++. ++++||+|+++.|+|++.... ++..|.+++.+
T Consensus 65 ~~p~~~~l~~~la~~~----g~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v- 136 (403)
T 3cog_A 65 GNPTRNCLEKAVAALD----GAK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV- 136 (403)
T ss_dssp -CHHHHHHHHHHHHHH----TCS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE-
T ss_pred CCchHHHHHHHHHHHh----CCC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE-
Confidence 4455678888888887 433 45665555 699999999 889999999999999875443 35689999988
Q ss_pred cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEeece-eccCCCccccccC
Q 015890 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTY-FMYDGRKHCCVEG 219 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~livDe~~-~~~~~~~~~~~~~ 219 (398)
+.+ |++.+++.+++++ ++|++++|+||||.+++ +++|+++|+++| +++|+|++| ......+. ..
T Consensus 137 ~~~------d~~~l~~~i~~~t--~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~~~---~~ 202 (403)
T 3cog_A 137 DCS------KIKLLEAAITPET--KLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQRPL---AL 202 (403)
T ss_dssp CTT------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCCTT---TT
T ss_pred CCC------CHHHHHHhcCcCC--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCCcc---cc
Confidence 553 7899999998754 99999999999999999 999999999999 999999999 33222221 13
Q ss_pred CcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890 220 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298 (398)
Q Consensus 220 ~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (398)
+.++++.|+||.++.+| .++||+++++ +++++.+......+..+.+++.++++...++. +..+.+...++...
T Consensus 203 ~~div~~S~sK~~~g~~~~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~n~~~ 276 (403)
T 3cog_A 203 GADISMYSATKYMNGHSDVVMGLVSVNC--ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT----LHVRMEKHFKNGMA 276 (403)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred CCeEEEEcChhhccCCCCCeEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHH
Confidence 56789999999998655 5799999864 68888887766555666788888888777765 23333344444444
Q ss_pred HHHHhcc--------------CCCCccccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CC--------
Q 015890 299 IREALSP--------------LGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GG-------- 350 (398)
Q Consensus 299 l~~~l~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~-------- 350 (398)
+.+.+++ ++...+..++ .+.++.+.++. .. +...+++++.||.++. |.
T Consensus 277 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~-~~~~~~l~~~~i~~~~~s~G~~~sl~~~p 352 (403)
T 3cog_A 277 VAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TL-QHAEIFLKNLKLFTLAESLGGFESLAELP 352 (403)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CH-HHHHHHHHHCSSSEECSCCSSSSCEEECT
T ss_pred HHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CH-HHHHHHHHhCCcceEccCCCCcceeeecc
Confidence 4444433 2332332221 13444446653 12 3344556788886543 21
Q ss_pred --CC------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 351 --AC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 351 --~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.. + .++.||+|++. ++.+++++.|.++++++.+
T Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 353 AIMTHASVLKNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp TTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHCC
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHHHhhc
Confidence 11 1 15789999997 4455667777777766544
No 200
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.96 E-value=1.8e-27 Score=229.92 Aligned_cols=331 Identities=13% Similarity=0.116 Sum_probs=232.0
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHh----c-------
Q 015890 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL----C------- 110 (398)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l----~------- 110 (398)
..++.+++++.....+.....|...+...++++.+.+++.+++|.++ +.+++++|+|+|+..++.++ +
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~ 190 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHS 190 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 45788888887766565455666666778899999999999988865 78999999999999998874 2
Q ss_pred --cC------CC-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCC
Q 015890 111 --DA------GD-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG 174 (398)
Q Consensus 111 --~~------gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~ 174 (398)
.+ |+ .|+++.++|+++...++..|. +++.+ |.++ ++.+|+++|++.+++. +.+.+|++++++
T Consensus 191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~ 268 (497)
T 2qma_A 191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTV-DANA-DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGT 268 (497)
T ss_dssp HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEE-ecCC-CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence 12 45 799999999999998888876 78888 7764 4678999999999743 323488888999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~ 250 (398)
||||.+.+ +++|+++|+++|+++|+|++| +..... ...... ...++++.|+||+++.| +++|++++++ +.
T Consensus 269 ~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~--~~ 342 (497)
T 2qma_A 269 TDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVND--KS 342 (497)
T ss_dssp TTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESC--GG
T ss_pred CCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeC--HH
Confidence 99999988 999999999999999999999 322221 100110 12347788999998744 6899999875 33
Q ss_pred HHHHHHHhhccCCCC----c-------------chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890 251 FATQLLKVQDNIPIC----A-------------SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313 (398)
Q Consensus 251 ~~~~l~~~~~~~~~~----~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 313 (398)
.++.+.......... . ....++++...+ +.+.+++..++..++++++.+.|++.+.+.+..
T Consensus 343 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 420 (497)
T 2qma_A 343 NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELLA 420 (497)
T ss_dssp GGGGGCC--------------------CCSCCCTHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS
T ss_pred HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc
Confidence 222221100000000 0 112223333333 346678888889999999999999876656643
Q ss_pred CCccEEEEeeCCCCCCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHH
Q 015890 314 GEGAIYLWARLPEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 314 ~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
+....++++.+.....+ ..++...+. +.|+.+.++..+...+++|+++ +. .++++++++++.|.++++++
T Consensus 421 ~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 421 EPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp CCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 33355666676532212 234555554 7799887655455567899998 44 78999999999999887763
No 201
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.6e-27 Score=223.11 Aligned_cols=281 Identities=19% Similarity=0.117 Sum_probs=191.9
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (398)
+...++++.+++++ +.+ +.++++|+++|++.++. ++++||+|+++.|+|++... .++..|.+++.+ +.
T Consensus 55 ~~~~~lr~~la~~~----g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~ 126 (393)
T 1n8p_A 55 PNRENLERAVAALE----NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-ND 126 (393)
T ss_dssp HHHHHHHHHHHHHT----TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-SS
T ss_pred hhHHHHHHHHHHHh----CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEe-CC
Confidence 34567777777776 443 45666666899999999 88999999999999986444 346678888888 55
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEeece--eccCCCccccc
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVVDNTY--FMYDGRKHCCV 217 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~----~~~livDe~~--~~~~~~~~~~~ 217 (398)
+ | +++++.++++ +++|++++|+||||.++| +++|.++|+++ |+++|+|++| +.+. . . .
T Consensus 127 ~------d-~~l~~~i~~~--t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~-~--~ 190 (393)
T 1n8p_A 127 L------L-NDLPQLIKEN--TKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N-P--L 190 (393)
T ss_dssp H------H-HHHHHHSCSS--EEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C-G--G
T ss_pred C------h-HHHHHhcccC--ceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-C-H--H
Confidence 3 6 8899999865 499999999999999999 99999999999 9999999999 3332 1 1 1
Q ss_pred cCCcEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890 218 EGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296 (398)
Q Consensus 218 ~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 296 (398)
..+.++++.|+||.+|.+|+|+ ||+++++ +++++.+.........+.++...+++...++. +....+...+++
T Consensus 191 ~~~~di~~~S~sK~~g~~G~rigG~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~ 264 (393)
T 1n8p_A 191 NFGADIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSA 264 (393)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHH
T ss_pred HcCCeEEEEECcccccCCCCceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHH
Confidence 2246689999999999899999 9998853 67888777665433445566666666666654 445556666777
Q ss_pred HHHHHHhccCCC-Cc-cccC---------------C--c-cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC----
Q 015890 297 EIIREALSPLGE-GA-VKGG---------------E--G-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC---- 352 (398)
Q Consensus 297 ~~l~~~l~~~~~-~~-~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---- 352 (398)
..+.+.|++.+. +. +..| . . +..+++.++....+...++..+ +..++.+..|+.|
T Consensus 265 ~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l-~~~~~~~s~G~~~s~~~ 343 (393)
T 1n8p_A 265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASST-RLFTLAESLGGIESLLE 343 (393)
T ss_dssp HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCCSSCEEE
T ss_pred HHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhC-CcceECCCCCCCcceee
Confidence 777777776543 11 1111 1 2 5567778863211223333332 2334444444321
Q ss_pred ------C-------------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890 353 ------G-------------CRGHLRISFGG-LVEDDCKAAADRLRR 379 (398)
Q Consensus 353 ------~-------------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 379 (398)
+ .++.||+|++. .++++++.+.++|.+
T Consensus 344 ~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 344 VPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp CTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 1 14689999998 444455555555443
No 202
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=1.6e-27 Score=227.58 Aligned_cols=347 Identities=11% Similarity=0.031 Sum_probs=230.2
Q ss_pred HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhc----CCCC-----CCCCCC----CCcHHHHHHHHHHHhhh
Q 015890 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW----DPSI-----SKYGAD----EGLPELRDALVKKLNQE 84 (398)
Q Consensus 18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~----~~~~-----~~y~~~----~~~~~~~~~l~~~l~~~ 84 (398)
.+.+.++.+..-...+.|+.+... +.|+.|++++..... +... ..+.+. ++..++.+.+.+++.++
T Consensus 67 ~i~~~~~~~~~~~~~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 145 (456)
T 2z67_A 67 KIKLFLKFLSMMDTDKDPKSVRIG-EREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQ 145 (456)
T ss_dssp HHHHHHHHHHTTBGGGCTTCEECS-SCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccccccc-cccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHH
Confidence 344444444433444556555433 446777777665321 1000 001010 12456778888888888
Q ss_pred cCCCCCcEEEecChH-HHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhh
Q 015890 85 NKLYKSSVMVTAGAN-QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL 159 (398)
Q Consensus 85 ~~~~~~~v~~~~g~t-~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l 159 (398)
+|.+++ +++++|+| .++..++.++.. +|+.|+++.++|..+...++..|++++.+ +.. ++++.+|+++|++++
T Consensus 146 ~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~d~~~l~~~i 223 (456)
T 2z67_A 146 LGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLDGDRVYVPVEDIENAI 223 (456)
T ss_dssp TTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEETTEEECCHHHHHHHH
T ss_pred cCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEE-EEeccCCCCCcCHHHHHHHH
Confidence 898766 99999999 566656666543 67789999999999999999999999888 652 244678999999999
Q ss_pred -cc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEccccccc
Q 015890 160 -ET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAY 232 (398)
Q Consensus 160 -~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~ 232 (398)
++ ++.+.+|++++|+||||.+.| +++|.++|+++|+++++|++| +.....+.. ......++++.|++|++
T Consensus 224 ~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~ 300 (456)
T 2z67_A 224 KKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNL 300 (456)
T ss_dssp HHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHH
T ss_pred HHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCc
Confidence 53 233578888999999999999 999999999999999999998 222101110 11112346788999987
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CC
Q 015890 233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EG 309 (398)
Q Consensus 233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~ 309 (398)
+ ++.++|++++++ +++++.+...........+...+.++...+. ...+++..++..++++++.+.|++.+ +.
T Consensus 301 ~-~p~g~G~l~~~~--~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~ 375 (456)
T 2z67_A 301 L-TPIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKKLLDELLNDLSKKTGG 375 (456)
T ss_dssp C-CCSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred C-CCCCeEEEEEcC--HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 5 568899999954 6777777443322211222334444444442 45678888889999999999998773 34
Q ss_pred ccccCCccEEEEeeC--CCCCCChHHHHHHHHHhcCe---EEe------cCCCC--CCCCeEEEEecC-CCHHHHHHHHH
Q 015890 310 AVKGGEGAIYLWARL--PEKHLDDFEVVRWLAHRHGV---VVI------PGGAC--GCRGHLRISFGG-LVEDDCKAAAD 375 (398)
Q Consensus 310 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi---~v~------~g~~~--~~~~~iRi~~~~-~~~~~~~~~~~ 375 (398)
.+..++ +++++.+ +. ...++..+|. ++|| .+. +|..| ...+++|++++. .++++++++++
T Consensus 376 ~v~~~~--~~v~~~~~~~~---~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~ 449 (456)
T 2z67_A 376 KFLDVE--SPIASCISVNS---DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVS 449 (456)
T ss_dssp CBCCCC--CSSEEEEECSS---CHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHH
T ss_pred EecCCC--CeEEEEEeccc---HHHHHHHHHH-HcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHH
Confidence 666665 4455555 32 1467777775 6675 443 12222 235799999986 79999999999
Q ss_pred HHHHHH
Q 015890 376 RLRRGL 381 (398)
Q Consensus 376 ~l~~~~ 381 (398)
+|++++
T Consensus 450 ~L~~~~ 455 (456)
T 2z67_A 450 KLEKIL 455 (456)
T ss_dssp HHHTC-
T ss_pred HHHHHh
Confidence 998654
No 203
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.96 E-value=1.4e-27 Score=230.09 Aligned_cols=334 Identities=12% Similarity=0.037 Sum_probs=231.9
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---------CcEEEecChHHHHHHHHHHhccC---
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDA--- 112 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---------~~v~~~~g~t~a~~~~~~~l~~~--- 112 (398)
+..+.+++...+.. ....|...++..++++.+.+++.+++|.+. ..+++|+|+|+|+..++.++...
T Consensus 87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~ 165 (486)
T 1js3_A 87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR 165 (486)
T ss_dssp HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence 34466667666643 356676677788999999999999988864 35899999999999998876421
Q ss_pred ------CC--------E--EEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC----CCeEEEEeC
Q 015890 113 ------GD--------S--VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVN 172 (398)
Q Consensus 113 ------gd--------~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----~~~~v~i~~ 172 (398)
|| + |+++.++|+++...++..|++++.+ +.++ ++.+|+++|++++++++ .+.+|++++
T Consensus 166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v-~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~ 243 (486)
T 1js3_A 166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDG-KFAMRASALQEALERDKAAGLIPFFVVATL 243 (486)
T ss_dssp HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEe-ecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 42 4 7889999999999999999999999 8764 56899999999997543 124888999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--Cccccc-cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--RKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
|+||||.+.+ +++|+++|+++|+++++|++| +.+.. ...... ..+.+.++.|.||+++.| +++|++++++
T Consensus 244 ~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~- 318 (486)
T 1js3_A 244 GTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKR- 318 (486)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESC-
T ss_pred CCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeC-
Confidence 9999999988 999999999999999999999 22211 111100 012235567899999754 8899999986
Q ss_pred cHHH-HHHHH---Hhhcc-----------------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 248 VEGF-ATQLL---KVQDN-----------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 248 ~~~~-~~~l~---~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+.. .+.+. ..... .+.......++++...+ +.+.+++..++..++++++.+.|++.
T Consensus 319 -~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 319 -RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY--GVKGLQAYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp -HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 443 22221 00000 00012234444444444 24667888888999999999999888
Q ss_pred CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~ 384 (398)
+++++..++...++.+.++.......++.++|. +.|+.+.++..+...+++|++++. .+++++++++++|+++++++
T Consensus 396 ~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 396 PRFEVCAEVTLGLVCFRLKGSDGLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp TTEEECSCCCSSEEEEEESSCHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCceeEEEEEecChHHHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 665665433244555565421111466777776 567654443334456799999754 57889999999999999888
Q ss_pred hccccc
Q 015890 385 VKDGMV 390 (398)
Q Consensus 385 ~~~~~~ 390 (398)
.++.++
T Consensus 475 ~~~~~~ 480 (486)
T 1js3_A 475 LAAEEG 480 (486)
T ss_dssp HC----
T ss_pred Hhhhcc
Confidence 765443
No 204
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=2e-26 Score=216.20 Aligned_cols=309 Identities=13% Similarity=0.108 Sum_probs=217.1
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeC
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFA 120 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~ 120 (398)
.++++++++.+.+.. .|.+..| ..++++.+++++ +. +++++++|++++++.++.++ .++||+|+++.
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~ 79 (394)
T 1o69_A 10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS----KS--ENALALNSATAALHLALRVAGVKQDDIVLASS 79 (394)
T ss_dssp --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 357888888887754 2545455 788999999988 33 68999999999999999999 89999999999
Q ss_pred CCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (398)
Q Consensus 121 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (398)
|+|+++...++..|.+++.+ +.+ +++.+|++.+++.+++.. .+++|++++ |+|...+ +++|.++|+++|++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~ 151 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFI-DCD-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIV 151 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEE-CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCE
T ss_pred CccHHHHHHHHHcCCEEEEE-EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCE
Confidence 99999999999999999999 777 456789999999998521 258998885 8998877 99999999999999
Q ss_pred EEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC-----------
Q 015890 200 LVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC----------- 265 (398)
Q Consensus 200 livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~----------- 265 (398)
+|+|++| ++ +.+...... .+.++...|.+|.++ |.++||+++++ +++++.+..........
T Consensus 152 li~Dea~~~g~~~~~~~~~~~-~~~~~~s~s~~K~l~--~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~g~ 226 (394)
T 1o69_A 152 LIEDAAEALGSFYKNKALGTF-GEFGVYSYNGNKIIT--TSGGGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGY 226 (394)
T ss_dssp EEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSC--CSSCEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCC
T ss_pred EEEECcCcccceeCCcccccc-cCcEEEEEeCCccCC--CCCceEEEECC--HHHHHHHHHHHHhccccCccccccccCc
Confidence 9999999 33 333221111 233444455577664 66899999964 67888776654321100
Q ss_pred ---cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccE--EEEeeCCCC----------
Q 015890 266 ---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAI--YLWARLPEK---------- 327 (398)
Q Consensus 266 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~--~~~~~~~~~---------- 327 (398)
.+....+++...++ ++++..++.+++++++.+.|++. +.+..+. .++ .+++.++..
T Consensus 227 ~~~~~~~~aa~~l~~l~----~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 300 (394)
T 1o69_A 227 NYRLSNVLGAIGVAQME----VLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKD 300 (394)
T ss_dssp BCBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred ccCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence 22233333222333 35667788888899999999876 3444332 122 355666532
Q ss_pred ----------CCChHHHHHHHHHhcCeEEecCCCCC------CC--------------CeEEEEecC-CCHHHHHHHHHH
Q 015890 328 ----------HLDDFEVVRWLAHRHGVVVIPGGACG------CR--------------GHLRISFGG-LVEDDCKAAADR 376 (398)
Q Consensus 328 ----------~~~~~~~~~~ll~~~gi~v~~g~~~~------~~--------------~~iRi~~~~-~~~~~~~~~~~~ 376 (398)
..+..++.+.| .++||.++++..+. .. ..+|+..+. .+++|+++++++
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~ 379 (394)
T 1o69_A 301 INISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKL 379 (394)
T ss_dssp EECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred ccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHH
Confidence 11355677766 47899999985430 00 234555455 789999999999
Q ss_pred HHHHHH
Q 015890 377 LRRGLE 382 (398)
Q Consensus 377 l~~~~~ 382 (398)
|++++.
T Consensus 380 l~~~~~ 385 (394)
T 1o69_A 380 ILKSIK 385 (394)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 887654
No 205
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=2e-26 Score=222.98 Aligned_cols=329 Identities=12% Similarity=0.101 Sum_probs=228.5
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc--------CC-
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD--------AG- 113 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~--------~g- 113 (398)
++.++..+.....+.....|...+...++++.+.+++.+.+|.+ ..++++++|+|+|+..++.++.. +|
T Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~ 184 (504)
T 2okj_A 105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 184 (504)
T ss_dssp HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 34443333333334334567666677788999999999988987 77899999999999999998753 46
Q ss_pred ----C-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCC
Q 015890 114 ----D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYI 181 (398)
Q Consensus 114 ----d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~ 181 (398)
+ .|+++.++|+++...++..|. +++.+ |.++ ++.+|++.|++++++ +..+++|++++|+||||.+.
T Consensus 185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~ 262 (504)
T 2okj_A 185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD 262 (504)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE-ecCC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence 6 789999999999998888876 88888 7764 468899999999975 21258999999999999998
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
+ +++|+++|+++|+++++|++| +...... .... ....++++.|.||+++.| .++|++++++ +++++...
T Consensus 263 ~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~--~~~~~~~~ 336 (504)
T 2okj_A 263 P---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGCN 336 (504)
T ss_dssp C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHHH
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEEC--HHHHHHHh
Confidence 8 999999999999999999999 3221111 1111 012347788999999744 6899999885 34544322
Q ss_pred Hhh-ccC-CC-------------------CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--
Q 015890 257 KVQ-DNI-PI-------------------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-- 313 (398)
Q Consensus 257 ~~~-~~~-~~-------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-- 313 (398)
... ... .. ......++++..++. .+.+++..++..++++++.+.|++.+.+++..
T Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 414 (504)
T 2okj_A 337 QMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--TVGFENQINKCLELAEYLYAKIKNREEFEMVFNG 414 (504)
T ss_dssp CCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS
T ss_pred cCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 111 100 00 113455566655554 45678888889999999999999886656654
Q ss_pred -CCccEEEEeeCCCCCC--------------ChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec-C-CCHHHHHHHHH
Q 015890 314 -GEGAIYLWARLPEKHL--------------DDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFG-G-LVEDDCKAAAD 375 (398)
Q Consensus 314 -~~~~~~~~~~~~~~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~-~~~~~~~~~~~ 375 (398)
+..+++.+...+.... ...++.+.|. +.|+.+..+..+.. .+++|++++ . .++++++++++
T Consensus 415 ~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~ 493 (504)
T 2okj_A 415 EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIE 493 (504)
T ss_dssp CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred CCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHH
Confidence 5545555443332100 0345667776 66754333222322 368999997 4 68999999999
Q ss_pred HHHHHHHHH
Q 015890 376 RLRRGLEEL 384 (398)
Q Consensus 376 ~l~~~~~~~ 384 (398)
+|+++++++
T Consensus 494 ~l~~~~~~~ 502 (504)
T 2okj_A 494 EIERLGQDL 502 (504)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHH
Confidence 998877654
No 206
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.95 E-value=1.3e-27 Score=228.83 Aligned_cols=337 Identities=12% Similarity=0.076 Sum_probs=225.4
Q ss_pred HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890 27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~ 100 (398)
.+|+.|+||..|... ++ .+|++.+|+.+++... ....|+. ....++++.+++.+.+..+...+.|++++|+++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse 138 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSC 138 (472)
T ss_dssp TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence 467889999887643 34 5899999999876321 1122322 345789999999887766656789999999999
Q ss_pred HHHHHHHHhc--------c-----------------CC---CEEEEeCCCCcChhhHHH-hcCcEE-----------EEe
Q 015890 101 AFVNIVLTLC--------D-----------------AG---DSVVMFAPYYFNSYMSFQ-MTGVTH-----------ILV 140 (398)
Q Consensus 101 a~~~~~~~l~--------~-----------------~g---d~Vl~~~p~~~~~~~~~~-~~g~~~-----------~~~ 140 (398)
|++.+++.+. . +| ++|++.+++|+++...+. ..|... ..+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999998874 1 35 899999999998765442 223110 111
Q ss_pred ccCCCCCC-------------CCChHHHHHhhccC----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEE
Q 015890 141 GPCSSKTL-------------HPDADWLEKTLETK----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 141 ~~~~~~~~-------------~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~liv 202 (398)
+.+...+ ..|++.|++.+++. .++++|++++.+|++|. ..+++++++|.++|++||+++|+
T Consensus 219 -~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 219 -PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp -CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 2111100 12688899988751 12588888877888997 46899999999999999999999
Q ss_pred eece--eccCCCccccccCCcE--EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHh
Q 015890 203 DNTY--FMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278 (398)
Q Consensus 203 De~~--~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 278 (398)
||+| +++.|........+.. +.+.|+||.+ ++| |+++ + +++. .+.......+++.++++++++.++|
T Consensus 298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~-l~G---G~~~-~---~~~~-~~~~~~~~~T~~~~~~~~aaa~aal 368 (472)
T 1ohv_A 298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKM-MTG---GFFH-K---EEFR-PNAPYRIFNTWLGDPSKNLLLAEVI 368 (472)
T ss_dssp ECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGG-SSE---EEEE-C---GGGS-CSSSSSSCCSSSSCHHHHHHHHHHH
T ss_pred eCcccCCCCCCCchhccccCCCCCCCEEEEcccc-ccC---CccC-c---hhhc-ccccccccCccCccHHHHHHHHHHH
Confidence 9999 5665532222211111 2344889994 335 7766 5 4442 1222333445677889999888888
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHhccC----CC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890 279 QTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353 (398)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 353 (398)
+...+ ++..++++++++++.+.|+++ +. +....+. +.+++++++.. .+..+++.+|+ ++||.+.++
T Consensus 369 ~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~~~~~---- 439 (472)
T 1ohv_A 369 NIIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE-SIRNKLISIAR-NKGVMLGGC---- 439 (472)
T ss_dssp HHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEE----
T ss_pred HHHHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh-hHHHHHHHHHH-HCCeEEecC----
Confidence 74111 234455566666666655543 32 2324455 56666777531 13457788776 789999985
Q ss_pred CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 354 CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 354 ~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
..++||++++. .+++++++++++|.+++++
T Consensus 440 g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 440 GDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 25799998887 7999999999999998865
No 207
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=4.3e-26 Score=220.26 Aligned_cols=327 Identities=12% Similarity=0.098 Sum_probs=227.0
Q ss_pred cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc----------
Q 015890 45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD---------- 111 (398)
Q Consensus 45 ~~~v~-~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~---------- 111 (398)
++.++ +.+...+.. ....|...++..++++.+.+|+.+++|.+ +..+++++|+|+|+..++.++..
T Consensus 108 ~~~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 108 IIGLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp HHHHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred HHHHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 44444 455555543 46778788888999999999999999887 46899999999999999888764
Q ss_pred ----CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccC
Q 015890 112 ----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 112 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~ 180 (398)
+++.|+++.++|.++...++..|. +++.+ +.+.+ +.+|+++|++++++. ..+++|++++++|++|.+
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v-~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEe-ecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 467899999999999999999998 88888 87754 689999999999743 125899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece-eccC-CCcc--ccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYD-GRKH--CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~-~~~~--~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l 255 (398)
.+ +++|+++|++||+++++|++| ...- .... ... ....+.++.+.+|+++.| ..+|++++++ +.+....
T Consensus 265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~--~~~~~~~ 338 (511)
T 3vp6_A 265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGC 338 (511)
T ss_dssp CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHH
T ss_pred cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeC--HHHHHHH
Confidence 88 999999999999999999999 2221 1111 110 012246778999999744 6788888875 4454443
Q ss_pred HHhhccC-------------------CCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-
Q 015890 256 LKVQDNI-------------------PIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG- 313 (398)
Q Consensus 256 ~~~~~~~-------------------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~- 313 (398)
....... ..+ ......+++...+ +.++++++.++..++++++.+.|++.+++++..
T Consensus 339 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~ 416 (511)
T 3vp6_A 339 NQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFN 416 (511)
T ss_dssp HCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS
T ss_pred hccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 2111000 000 1233344444433 356788999999999999999999886666655
Q ss_pred --CCccEEEEeeC-CCCCC----C----------hHHHHHHHHHhcCeEEecCCC-CCCCCeEEEEec-C-CCHHHHHHH
Q 015890 314 --GEGAIYLWARL-PEKHL----D----------DFEVVRWLAHRHGVVVIPGGA-CGCRGHLRISFG-G-LVEDDCKAA 373 (398)
Q Consensus 314 --~~~~~~~~~~~-~~~~~----~----------~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~-~-~~~~~~~~~ 373 (398)
+..+. +++.+ +.... + ..++.++|. ++|+.+..... .+..+++|++++ . .+.++++.+
T Consensus 417 ~~p~~~~-v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~l 494 (511)
T 3vp6_A 417 GEPEHTN-VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFL 494 (511)
T ss_dssp SCCSSSC-EEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHH
T ss_pred CCCCeEE-EEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHH
Confidence 44333 44433 22110 0 235667775 56765443111 112357999984 3 688999999
Q ss_pred HHHHHHHHHHH
Q 015890 374 ADRLRRGLEEL 384 (398)
Q Consensus 374 ~~~l~~~~~~~ 384 (398)
++.|++.-+.+
T Consensus 495 l~~i~~~~~~~ 505 (511)
T 3vp6_A 495 IEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhh
Confidence 99888776554
No 208
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.7e-26 Score=221.71 Aligned_cols=329 Identities=13% Similarity=0.089 Sum_probs=234.1
Q ss_pred cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC----------cEEEecChHHHHHHHHHHhcc--
Q 015890 45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS----------SVMVTAGANQAFVNIVLTLCD-- 111 (398)
Q Consensus 45 ~~~v~-~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~----------~v~~~~g~t~a~~~~~~~l~~-- 111 (398)
+|.++ +.+...+.. ....|..+++..++++.+.+++.+.+|.+.. ..++++|+|+++..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~ 169 (481)
T 4e1o_A 91 WPSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNK 169 (481)
T ss_dssp HHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHH
Confidence 34444 445555443 4677888889999999999999999887642 578999999999988887642
Q ss_pred -----------------CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEE
Q 015890 112 -----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSV 170 (398)
Q Consensus 112 -----------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i 170 (398)
+++.|+++.++|.++...++..|.+++.+ +.++ ++.+|+++|++++++. ..+.+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v-~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~ 247 (481)
T 4e1o_A 170 ILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFL-PVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCA 247 (481)
T ss_dssp HHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEE-EcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 46789999999999999999999999999 8764 4689999999999743 11477888
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCcccc-ccC--CcEEEEcccccccCCCcceeEEEEcc
Q 015890 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCC-VEG--DHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~-~~~--~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
+.++|++|.+.| +++|+++|++||+++++|++| .. ........ ..+ ..+.++.+.||+++.| ..+|+++.+
T Consensus 248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~ 323 (481)
T 4e1o_A 248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVK 323 (481)
T ss_dssp EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEe
Confidence 899999999988 999999999999999999999 22 21111111 111 1246678999999744 557887777
Q ss_pred CCcHHHHHHHHHhhc-c----------------CCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890 246 SEVEGFATQLLKVQD-N----------------IPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306 (398)
Q Consensus 246 ~~~~~~~~~l~~~~~-~----------------~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (398)
+ +........... . ...+ .....++++...+ +.+.++++.++..++++++.+.|++.
T Consensus 324 ~--~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~ 399 (481)
T 4e1o_A 324 D--KYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF--GVKNLQAHVRHGTEMAKYFESLVRND 399 (481)
T ss_dssp B--HHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred C--HHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5 444322110000 0 0001 1234444444444 24667888899999999999999998
Q ss_pred CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC-eEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 015890 307 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG-VVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-i~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~ 383 (398)
+++++..+...+++++.++.......++.++|. +.| +++.++. ..+..++|++++. .+++++++++++|++++++
T Consensus 400 ~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 400 PSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIA-KAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp TTEECCSCCCSSEEEEEESSCHHHHHHHHHHHH-HHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCceeEEEEEeCCchHHHHHHHHHHH-hCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 776776655577778887542223567788776 456 5554432 2345689999776 4789999999999999887
Q ss_pred Hhc
Q 015890 384 LVK 386 (398)
Q Consensus 384 ~~~ 386 (398)
+.+
T Consensus 478 l~~ 480 (481)
T 4e1o_A 478 ILS 480 (481)
T ss_dssp HHT
T ss_pred Hhh
Confidence 653
No 209
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.92 E-value=4.1e-30 Score=243.34 Aligned_cols=330 Identities=13% Similarity=0.062 Sum_probs=224.4
Q ss_pred HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|..+ ++ .+|++.+++.+++.+.....| +.....++.+.+++++ + ..+.+++++|+++|+.
T Consensus 97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~----p-~~~~v~~~nSGseA~~ 170 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRF----P-SIDLVRFTNSGTEANL 170 (465)
Confidence 578999999988753 33 489999999998876433334 4444455555555554 3 3578999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHH----hcCc--EEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCC
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ----MTGV--THILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPG 174 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~ 174 (398)
.+++.+. ..+++|++.+++|+++...+. ..|+ .++.+ + + .|++.|++.++.. ..+++|+++..+
T Consensus 171 ~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~-~-----~-~d~~~l~~~l~~~~~~~aavi~epv~ 243 (465)
T 2yky_A 171 MALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG-V-----Y-NDVEGTADLLKRHGHDCAAILVEPML 243 (465)
Confidence 9998864 345899999999988665433 1233 22222 1 1 2788999998731 235888887656
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEeeceecc-CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890 175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252 (398)
Q Consensus 175 nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 252 (398)
+++|.+ .+++++++|.++|+++|+++|+||+|. + .+........+....+.|+||.+| +|+|+||++++ ++++
T Consensus 244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~---~~i~ 318 (465)
T 2yky_A 244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIG-GGMSFGAFGGR---RDLM 318 (465)
Confidence 679965 568889999999999999999999994 2 122111111223344668999998 59999999999 6788
Q ss_pred HHHHH-----hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCccccCCccEEEEee
Q 015890 253 TQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYLWAR 323 (398)
Q Consensus 253 ~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~ 323 (398)
+.+.. .....+++.|+++++++.++|+...+ +...+++.++.+++++.|++ .+......+. +.++++.
T Consensus 319 ~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~-G~~~~i~ 395 (465)
T 2yky_A 319 ERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTGL-GSLGTIH 395 (465)
Confidence 87765 23445778899999999888875221 23344455555555555543 3332223343 7778877
Q ss_pred CCC-CC-----------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 324 LPE-KH-----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 324 ~~~-~~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
+.. .. .....++..++ ++||++.|+.. . . +++. .+++++++++++|.++++++.
T Consensus 396 ~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~---~--~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 396 FSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y---A--LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 753 10 01345777776 79999998752 1 1 5655 589999999999999987753
No 210
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=7.3e-26 Score=215.24 Aligned_cols=321 Identities=15% Similarity=0.121 Sum_probs=220.3
Q ss_pred CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (398)
Q Consensus 29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~ 108 (398)
|++.+.|+.. + .++++++++.+.+... .|.+..+..++++.+++++ +.+ ++++++|+++++..++.+
T Consensus 30 ~~~~i~~~~~--~--~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~a~~~al~~ 96 (437)
T 3bb8_A 30 GKSVVPPSGK--V--IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYL----GVP--YVLTTTSGSSANLLALTA 96 (437)
T ss_dssp TTSCBCSCCC--C--CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHH
T ss_pred CCccccCCCC--C--CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHH----CCC--cEEEeCCHHHHHHHHHHH
Confidence 4455666432 2 3578889988887642 2446677888999999988 433 678888888999999999
Q ss_pred h---------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890 109 L---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (398)
Q Consensus 109 l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~ 179 (398)
+ .++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|++++ ++|.
T Consensus 97 l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~---~~g~ 170 (437)
T 3bb8_A 97 LTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFV-DVDIPTYNVNASLIEAAVSDKT--KAIMIAH---TLGN 170 (437)
T ss_dssp TTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEEC-CEETTTTEECGGGHHHHCCTTE--EEEEEEC---GGGC
T ss_pred hhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEE-eccCccCCcCHHHHHHhcCCCC--eEEEEeC---CCCC
Confidence 8 7889999999999999999999999999998 7765457789999999998654 8998874 3444
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890 180 YIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~ 256 (398)
..+ +++|.++|+++|+++|+|++| ++ +++.... .. ..+++.|++|.++++|.++|+++.++ +.+.+.+.
T Consensus 171 ~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~--~~-~d~~~~s~~~~k~l~~g~gg~~~~~~--~~~~~~~~ 242 (437)
T 3bb8_A 171 LFD---LAEVRRVADKYNLWLIEDCCDALGSTYDGKMAG--TF-GDIGTVSFYPAKHITMGEGGAVFTQS--AELKSIIE 242 (437)
T ss_dssp CCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTEETT--SS-SSEEEEECSTTSSSCCSSCEEEEESC--HHHHHHHH
T ss_pred hhc---HHHHHHHHHHcCCEEEEECccccCceECCeecc--cc-cCEEEEECcCCcCCCCCCeEEEEeCC--HHHHHHHH
Confidence 466 999999999999999999999 33 2221111 11 12667788777777888999999884 33333322
Q ss_pred Hhh---cc------------------------------------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890 257 KVQ---DN------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297 (398)
Q Consensus 257 ~~~---~~------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (398)
... .. +....+....+++...++. +.+..++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~----~~~~~~~~~~~~~ 318 (437)
T 3bb8_A 243 SFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER----IEEFVEKRKANFK 318 (437)
T ss_dssp HHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 211 00 0111234455445555542 3445555577788
Q ss_pred HHHHHhccCCCCccccCC------c-cEEE-EeeCCCCCCChHHHHHHHHHhcCeEEecCCC--CC-CC-----------
Q 015890 298 IIREALSPLGEGAVKGGE------G-AIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGA--CG-CR----------- 355 (398)
Q Consensus 298 ~l~~~l~~~~~~~~~~~~------~-~~~~-~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~-~~----------- 355 (398)
++.+.|+++++..+.+.. + .+|. .+..+. ..+..++...|. ++||.++++.. +. .+
T Consensus 319 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~GI~v~~~~~~~~~~~p~~~~~~~~~~~ 396 (437)
T 3bb8_A 319 YLKDALQSCADFIELPEATENSDPSWFGFPITLKEDS-GVSRIDLVKFLD-EAKVGTRLLFAGNLTRQPYFHDVKYRVVG 396 (437)
T ss_dssp HHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGG-SSCHHHHHHHHH-HTTBCCBCCTTSSGGGSGGGSSCCCEECS
T ss_pred HHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcC-cCcHHHHHHHHH-HCCCceeccCCcccccCchhhccCccccC
Confidence 888999887443333211 1 1233 244321 135677888775 78999998764 11 01
Q ss_pred ----------CeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 356 ----------GHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 356 ----------~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
+.||++++. .+++|++++++.|+++++
T Consensus 397 ~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 397 ELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 249999988 899999999999987653
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=2.6e-26 Score=215.55 Aligned_cols=211 Identities=16% Similarity=0.061 Sum_probs=156.2
Q ss_pred CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCC
Q 015890 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCS 144 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~ 144 (398)
...++++.+++++ +. ++.++++|+++|++.++.+++++||+|+++.+.|++....+ +..|+++..+ +.+
T Consensus 83 ~~~~le~~lA~l~----g~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v-~~~ 155 (415)
T 2fq6_A 83 THFSLQQAMCELE----GG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DPL 155 (415)
T ss_dssp HHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CTT
T ss_pred hHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEE-CCC
Confidence 3455666666655 54 35677789999999999999999999999999998876544 4578999888 542
Q ss_pred CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEeece-eccCCCccccccCCc
Q 015890 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTY-FMYDGRKHCCVEGDH 221 (398)
Q Consensus 145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~--~~~~livDe~~-~~~~~~~~~~~~~~~ 221 (398)
|++++++++++++ ++|++++|+||+|.++| +++|+++|++ +|+++|+|++| .++...+. ..+.
T Consensus 156 ------d~~~le~ai~~~t--klV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~~p~---~~g~ 221 (415)
T 2fq6_A 156 ------IGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL---DFGI 221 (415)
T ss_dssp ------CGGGGGGGCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG---GGTC
T ss_pred ------CHHHHHHhhccCC--cEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccCCcc---ccCC
Confidence 7899999998765 99999999999999999 9999999999 99999999999 43322222 2345
Q ss_pred EEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890 222 VVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300 (398)
Q Consensus 222 ~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 300 (398)
++++.|++|.++.+|.+ +||++.+ +++++.+...........++...+++...++ .+..+.+...++...+.
T Consensus 222 Div~~S~sK~lg~~g~~~~G~l~~~---~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~----~l~~r~~~~~~n~~~l~ 294 (415)
T 2fq6_A 222 DVSIQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLR----TLGVRLRQHHESSLKVA 294 (415)
T ss_dssp SEEEEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCccccCCCCCceEEEEEeC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----HHHHHHHHHHHHHHHHH
Confidence 68899999999877754 6899888 4566666655443334444444444444443 34555666677777788
Q ss_pred HHhccCC
Q 015890 301 EALSPLG 307 (398)
Q Consensus 301 ~~l~~~~ 307 (398)
+.|++.+
T Consensus 295 ~~L~~~~ 301 (415)
T 2fq6_A 295 EWLAEHP 301 (415)
T ss_dssp HHHHTCT
T ss_pred HHHHcCC
Confidence 8777654
No 212
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=2.2e-26 Score=216.73 Aligned_cols=284 Identities=19% Similarity=0.148 Sum_probs=191.6
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC 143 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (398)
+...++++.+++++ +. +..++++++++|+..++.+++++||+|+++.|+|++... .++..|++++.+ +.
T Consensus 82 p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v-~~ 154 (430)
T 3ri6_A 82 PTVEDLEQRLKNLT----GA--LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV-DV 154 (430)
T ss_dssp HHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE-CT
T ss_pred HHHHHHHHHHHHHH----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CC
Confidence 34455555555554 54 335666777899999999999999999999999988776 667889999988 55
Q ss_pred CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV 222 (398)
Q Consensus 144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~ 222 (398)
+ |++.+++++++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .+... .....+.+
T Consensus 155 ~------d~~~l~~ai~~~t--~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~---~~~~~g~d 220 (430)
T 3ri6_A 155 M------DSLAVEHACDETT--KLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL---EAKRLGVD 220 (430)
T ss_dssp T------CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC---CGGGGTCS
T ss_pred C------CHHHHHHhhCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---ChHHcCCE
Confidence 3 8999999998764 99999999999999999 889999999999999999999 33321 11222345
Q ss_pred EEEcccccccCCCcceeE-EEEccCC--c------H---------HHHHHHHH-hhccCCCCcchHHHHHHHHHhcCCch
Q 015890 223 VNLFSFSKAYGMMGWRVG-YIAYPSE--V------E---------GFATQLLK-VQDNIPICASIISQHLALYSLQTGPE 283 (398)
Q Consensus 223 i~~~s~sK~~~~~G~r~G-~i~~~~~--~------~---------~~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~ 283 (398)
+++.|++|.++.+|..+| +++.+.. + + .++..+.. .......+.++...+.+...+ +
T Consensus 221 iv~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l----~ 296 (430)
T 3ri6_A 221 IEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL----E 296 (430)
T ss_dssp EEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH----H
T ss_pred EEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----h
Confidence 889999999986665444 4542221 1 1 11222221 112223344444444433333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890 284 WVTERVKDLVRNREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346 (398)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 346 (398)
.+..+.++..+++..+.+.|++.+.++ +..|. +++.+++.++. ..+...+++.+ +-.++.+
T Consensus 297 ~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l-~~~~~~~ 374 (430)
T 3ri6_A 297 TMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDAL-KLIRRAT 374 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHC-SSSEECS
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhC-CcceecC
Confidence 356667777888999999999887654 33332 34488889872 22333444433 2345555
Q ss_pred ecCCCCC-----------------------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 347 IPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 347 ~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
..|..+. .++.||+|++. |+.+.+++.|++++
T Consensus 375 s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al 429 (430)
T 3ri6_A 375 NIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL 429 (430)
T ss_dssp CCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 6665432 24689999997 55666667777665
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.95 E-value=2.6e-26 Score=219.93 Aligned_cols=330 Identities=11% Similarity=0.031 Sum_probs=231.1
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC---------cEEEecChHHHHHHHHHHhcc----
Q 015890 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCD---- 111 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~---------~v~~~~g~t~a~~~~~~~l~~---- 111 (398)
++.++..+.....+.....|..+++..++++.+.+++.+.+|.+.+ ..++++|+|+++..++.+.+.
T Consensus 86 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~ 165 (475)
T 3k40_A 86 YPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLK 165 (475)
T ss_dssp HHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHH
Confidence 4444444434334444667878888899999999999999987643 689999999999988887631
Q ss_pred ---------------CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeC
Q 015890 112 ---------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVN 172 (398)
Q Consensus 112 ---------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~ 172 (398)
+++.|+++..+|.++...++..|++++.+ +.+++ + +|+++|+++|++. ..+.+|+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v-~~d~~-~-~d~~~L~~~i~~~~~~~~~~~~v~~~~ 242 (475)
T 3k40_A 166 EVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSV-QSENH-R-MRGAALEKAIEQDVAEGLIPFYAVVTL 242 (475)
T ss_dssp HHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEE-CCBTT-B-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEE-ECCCC-C-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence 23579999999999999999999999999 88755 4 8999999999743 1146788889
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCcccc-cc--CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCC-VE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~-~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~ 247 (398)
++|++|.+.| +++|+++|++||+++++|++| .. ........ .. ...+.++.|.||+++ ....+|+++.++
T Consensus 243 ~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~- 317 (475)
T 3k40_A 243 GTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKD- 317 (475)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESS-
T ss_pred cCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeC-
Confidence 9999999988 999999999999999999999 22 21111111 11 112467789999886 335678887775
Q ss_pred cHHHH-HHHHH---hhcc-------------CCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 248 VEGFA-TQLLK---VQDN-------------IPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 248 ~~~~~-~~l~~---~~~~-------------~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+... +.+.. +... ...+ .....++++...+ +.+.++++.++..++++++.+.|++.++
T Consensus 318 -~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g 394 (475)
T 3k40_A 318 -PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY--GVENLQAHIRRHCNFAKQFGDLCVADSR 394 (475)
T ss_dssp -GGGC---------------------------CCCGGGTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred -HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3221 11110 0000 0001 1123333333333 2456788888999999999999998877
Q ss_pred CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhc
Q 015890 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+++..+...+.+++.++.......++.++|.++.++.+.++. ..+..++|++++. ++++++++++++|+++++++..
T Consensus 395 ~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 395 FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 677765556777777753222356788888754444555433 2345789999875 4789999999999999988764
No 214
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.95 E-value=8.8e-26 Score=211.23 Aligned_cols=279 Identities=20% Similarity=0.188 Sum_probs=194.5
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-----HhcCcEEEEeccCCCCC
Q 015890 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKT 147 (398)
Q Consensus 73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~~~~~~~ 147 (398)
..+.+.+.+.++.+. +.+++++|+++|+.. +..++++||+|+++.++|++....+ +..|.+++.+ +.+
T Consensus 68 ~~~~l~~~la~l~g~--~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v-~~~--- 140 (400)
T 3nmy_A 68 TRFAYERCVAALEGG--TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV-DLT--- 140 (400)
T ss_dssp HHHHHHHHHHHHHTC--SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE-CTT---
T ss_pred HHHHHHHHHHHHhCC--CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE-CCC---
Confidence 344444444444454 367777778999998 5678899999999999998666554 3459999888 543
Q ss_pred CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF 226 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~ 226 (398)
|++.+++++++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|++| .++...+. ..+.++++.
T Consensus 141 ---d~~~l~~~i~~~~--~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~---~~g~div~~ 209 (400)
T 3nmy_A 141 ---DPAAFKAAIRADT--KMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRPL---SLGADLVVH 209 (400)
T ss_dssp ---SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCGG---GGTCSEEEE
T ss_pred ---CHHHHHHHhccCC--CEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCcEEEe
Confidence 7899999998764 99999999999999999 999999999999999999999 32222111 123558899
Q ss_pred ccccccCCCcceeEE--EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890 227 SFSKAYGMMGWRVGY--IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304 (398)
Q Consensus 227 s~sK~~~~~G~r~G~--i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 304 (398)
|++|.++.+|.++|. ++..+ +++++.+.........+.++...+++...++. +..+.++..+++..+.+.|+
T Consensus 210 S~sK~l~g~g~~~gG~~vv~~~--~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----l~~r~~~~~~~a~~l~~~L~ 283 (400)
T 3nmy_A 210 SATKYLNGHSDMVGGIAVVGDN--AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----LPLRMRAHCENALALAQWLE 283 (400)
T ss_dssp ETTTTTTCSSSCCCEEEEECSC--HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHT
T ss_pred cCccccCCCCCcceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHH
Confidence 999999877766654 55544 77888887766655667777777777666664 45666777888888999998
Q ss_pred cCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhc---CeEEecCCCCC-----------
Q 015890 305 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRH---GVVVIPGGACG----------- 353 (398)
Q Consensus 305 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~----------- 353 (398)
+.+.+. +..| ..+.++++.++.. .+....++++. ++.+..|..+.
T Consensus 284 ~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~ 359 (400)
T 3nmy_A 284 THPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGG----FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHA 359 (400)
T ss_dssp TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH----HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTT
T ss_pred cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCc----HHHHHHHHHcCCcceEecCCCCCcceeeCccccccc
Confidence 876533 2221 1256778888632 23233333333 33333333211
Q ss_pred ------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890 354 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 354 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~ 382 (398)
.++.+|+|++. |+.+.+++.|.+++.
T Consensus 360 ~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 360 SIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp TSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred cCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 24689999997 555566677777765
No 215
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.95 E-value=8.4e-26 Score=214.82 Aligned_cols=320 Identities=17% Similarity=0.123 Sum_probs=209.1
Q ss_pred EcCCccCCCCCcHHHHHHH--HHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890 34 SLAQGVVYWQPPKMAMEKV--KELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (398)
Q Consensus 34 ~l~~g~~~~~~~~~v~~a~--~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l 109 (398)
.++.|.++...|+.+.+.+ ...+.. .+.|.+ ..+..++.+.+.+.+.+++|.+++++++++|+|.+++.+..++
T Consensus 68 ~~~~g~~~~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~ 145 (438)
T 1wyu_A 68 FLGGGVRSHHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLAL 145 (438)
T ss_dssp CCCSSCCCCCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHH
T ss_pred ccCCCccCCcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHH
Confidence 4445666666666664443 222222 122321 4456677777778887777888888899999995555444442
Q ss_pred -ccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 110 -CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 110 -~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
.++||+|+++.++|+.+...+ +..|++++.+ +. ++ +.+|+++ ++++ +++|++++| ||||.+.+
T Consensus 146 ~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v-~~-~~-~~~d~~~----i~~~--t~~v~i~~p-n~tG~~~~-- 213 (438)
T 1wyu_A 146 RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL-PL-EG-GRTPLPE----VGEE--VGAVVVQNP-NFLGALED-- 213 (438)
T ss_dssp HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE-CC-BT-TBCCCCC----CCTT--EEEEEEESS-CTTSBCCC--
T ss_pred hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE-cC-cC-CccCHHH----hCCC--eEEEEEECC-CCCeEEec--
Confidence 478999999999998877555 4589999998 65 23 4667766 5544 599999999 99999998
Q ss_pred HHHHHHHHHHHcCCEEEEeec-e-eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHh
Q 015890 185 LLKRISDLCKAAGSWLVVDNT-Y-FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV 258 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~-~-~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~ 258 (398)
+++|+++|+++|+++|+|.. + ++....+ ...+.+++++| +|.|| +.|.++|+++++ +++++.+...
T Consensus 214 -l~~i~~la~~~g~~vivd~d~~a~g~~~~~---~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~---~~~~~~l~~~ 285 (438)
T 1wyu_A 214 -LGPFAEAAHGAGALFVAVADPLSLGVLKPP---GAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK---KAFVRQLPGR 285 (438)
T ss_dssp -HHHHHHHHHHTTCEEEEECCTTGGGTBCCH---HHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC---GGGGGGCCSC
T ss_pred -HHHHHHHHHHcCCEEEEEechhhccCcCCC---ccCCCCEEEEC-CcccCCCccCCCCCeeEEEEc---HHHHHhCCCc
Confidence 99999999999999996632 2 2221111 11123366666 55443 456689999998 4554433110
Q ss_pred -------------------------h-ccCCCCc---chHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890 259 -------------------------Q-DNIPICA---SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGE 308 (398)
Q Consensus 259 -------------------------~-~~~~~~~---~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (398)
+ ...+.+. +......+...+.. +.+.+++..++..++++++.+.|+++++
T Consensus 286 ~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g 365 (438)
T 1wyu_A 286 LVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG 365 (438)
T ss_dssp CEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred eeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 0011111 11222111212322 2345778888899999999999999855
Q ss_pred CccccCCccEE--EEeeCCCCCCChHHHHHHHHHhcCeEE--ecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 309 GAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVV--IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 309 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gi~v--~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+++..+. .++ +.+.++ .+..++.++|. ++||.+ .++..|. ++++||+++. .+.+++++++++|++++
T Consensus 366 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 366 VRPFTPK-PFFNEFALALP---KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CEECSCS-SBCSEEEEECS---SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred eEECCCC-CeEEEEEEeCC---CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 5666553 333 334443 25778888886 679999 6666553 7899999997 68999999999987653
No 216
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=6.1e-25 Score=212.96 Aligned_cols=329 Identities=13% Similarity=0.106 Sum_probs=223.7
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc-------c-CCC-
Q 015890 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-------D-AGD- 114 (398)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~-------~-~gd- 114 (398)
.|+.+...+.....+.....|...++..++++.+.+++.+++|.++.++++++|+|+|+..++.++. + +|+
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~ 199 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLR 199 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCcc
Confidence 3455554433344444445676677778888999999999889888899999999999999988874 2 465
Q ss_pred -----EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCC
Q 015890 115 -----SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 115 -----~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~ 182 (398)
.|+++.++|+++...++..|. +++.+ |.++ ++.+|+++|++++++ +..+++|++++|+|+||.+.|
T Consensus 200 ~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~ 277 (515)
T 2jis_A 200 TLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVV-KADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP 277 (515)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred ccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEE-ecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC
Confidence 899999999999999998888 88888 8765 457899999999974 222589999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCcc--cccc-CCcEEEEcccccccCCCcceeEEEEccCCcH-HHHHHHH
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH--CCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLL 256 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~-~~~~~l~ 256 (398)
+++|+++|+++|+++|+|++| +....... .... .+.++++.|++|+++ .+.++|++++++ + ++++...
T Consensus 278 ---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~--~~~~~~~~~ 351 (515)
T 2jis_A 278 ---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQD--TSNLLKRCH 351 (515)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESC--CSCHHHHHH
T ss_pred ---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccC-CCCCeeEEEEeC--hHHHHHHHh
Confidence 999999999999999999999 22222111 1111 133478889999987 345789999885 3 2444321
Q ss_pred ----Hhh-c----------cCCC------CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-
Q 015890 257 ----KVQ-D----------NIPI------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG- 314 (398)
Q Consensus 257 ----~~~-~----------~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~- 314 (398)
.+. . .... ......++++..++. ...+++..++..++++++.+.|++.+++++..+
T Consensus 352 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~ 429 (515)
T 2jis_A 352 GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--DQGLERRIDQAFVLARYLVEEMKKREGFELVMEP 429 (515)
T ss_dssp CC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC
T ss_pred cCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 111 0 0000 011344444444443 355778888899999999999998866566543
Q ss_pred CccEEEEeeCCCC------CCCh--------HHHHHHHHHhcCeEEecCCC-CCCCCeEEEEe-cC-CCHHHHHHHHHHH
Q 015890 315 EGAIYLWARLPEK------HLDD--------FEVVRWLAHRHGVVVIPGGA-CGCRGHLRISF-GG-LVEDDCKAAADRL 377 (398)
Q Consensus 315 ~~~~~~~~~~~~~------~~~~--------~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~-~~-~~~~~~~~~~~~l 377 (398)
..+.+.+...+.. ..+- ..+...+. +.|+.+..... .+..+++|+++ +. .+++++++++++|
T Consensus 430 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l 508 (515)
T 2jis_A 430 EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNEL 508 (515)
T ss_dssp SSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred CeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 3344433333321 0010 12445554 66865532111 12346899999 45 7899999999999
Q ss_pred HHHHHH
Q 015890 378 RRGLEE 383 (398)
Q Consensus 378 ~~~~~~ 383 (398)
++++++
T Consensus 509 ~~~~~~ 514 (515)
T 2jis_A 509 ERLGQD 514 (515)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 887643
No 217
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=2.3e-24 Score=201.96 Aligned_cols=316 Identities=14% Similarity=0.112 Sum_probs=216.8
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh--
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-- 109 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-- 109 (398)
++++..+.+ ..++++++++.+.+.+. .|.+..+..++++.+++++ +.+ ++++++++++++..++.++
T Consensus 3 ~~~~~~~~~--~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~~i~~~sGt~a~~~al~~~~~ 71 (390)
T 3b8x_A 3 MINYPLASS--TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF----GSK--YAVMVSSGSTANLLMIAALFF 71 (390)
T ss_dssp --CBCSCCC--CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHTTS
T ss_pred ceeccCCCC--CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH----CCC--cEEEECCHHHHHHHHHHHHHh
Confidence 344444433 35789999998887652 3556677788999999988 432 5778888889999999998
Q ss_pred -----ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890 110 -----CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (398)
Q Consensus 110 -----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 184 (398)
.++||+|+++.++|+++...++..|++++.+ +.+++++.+|+++|++.++++ +++|++++ ++|...+
T Consensus 72 ~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~---~~g~~~~-- 143 (390)
T 3b8x_A 72 TKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFV-DIDINTLNIDIESLKEAVTDS--TKAILTVN---LLGNPNN-- 143 (390)
T ss_dssp SSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHCCTT--EEEEEEEC---GGGCCCC--
T ss_pred hhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCccccCcCHHHHHHHhCcC--CeEEEEEC---CccChhh--
Confidence 7889999999999999999999999999999 887665788999999999865 48888873 5676677
Q ss_pred HHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 185 LLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
+++|.++|+++|+++|+|++| ++. .+..... ..+...+....+|.++ +| +.|++++++ +++.+.+......
T Consensus 144 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~-~~~~~~~s~~~~k~~~-~g-~gG~~~~~~--~~l~~~~~~~~~~ 217 (390)
T 3b8x_A 144 -FDEINKIIGGRDIILLEDNCESMGATFNNKCAGT-FGLMGTFSSFYSNHIA-TM-EGGCIVTDD--EEIYHILLCIRAH 217 (390)
T ss_dssp -HHHHHHHHTTSCCEEEEECTTCTTCEETTEETTS-SSSEEEEECCTTSSSC-SS-SCEEEEESC--HHHHHHHHHHTBT
T ss_pred -HHHHHHHHHHcCCEEEEECcCcccCEECCccccc-ccceEEEEccCCCCCc-cC-CceEEEeCC--HHHHHHHHHHHhc
Confidence 999999999999999999999 332 2211111 1111122222355553 33 348988874 4666655543211
Q ss_pred -------------------------------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890 262 -------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310 (398)
Q Consensus 262 -------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (398)
..+..+....+++...+ +++++..++.+++++++.+.|++++++.
T Consensus 218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l----~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 218 GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL----KKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 01114444444444444 3466777888888999999998876545
Q ss_pred cccC--Ccc-EEEEeeCCCC-CCChHHHHHHHHHhcCeEEec---CCCCCC-C---------------------CeEEEE
Q 015890 311 VKGG--EGA-IYLWARLPEK-HLDDFEVVRWLAHRHGVVVIP---GGACGC-R---------------------GHLRIS 361 (398)
Q Consensus 311 ~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~---g~~~~~-~---------------------~~iRi~ 361 (398)
+..+ ... ..+++.++.. ..+..++...| .++||.+++ ++.|.. + +.||++
T Consensus 294 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 372 (390)
T 3b8x_A 294 VQQETGESSWFGFSFIIKKDSGVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVG 372 (390)
T ss_dssp ECCCCSBCCCCEEEEEECTTSCCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEE
T ss_pred cCCCCCCcccEEEEEEecCcCcccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEee
Confidence 5443 222 2355555521 23567777777 478999987 332222 1 259999
Q ss_pred ecC-CCHHHHHHHHHHH
Q 015890 362 FGG-LVEDDCKAAADRL 377 (398)
Q Consensus 362 ~~~-~~~~~~~~~~~~l 377 (398)
++. .+++|++++++.|
T Consensus 373 ~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 373 NHQIELFDEIDYLREVL 389 (390)
T ss_dssp CCSSCCHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHhh
Confidence 998 8999999988876
No 218
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1e-25 Score=214.17 Aligned_cols=283 Identities=10% Similarity=0.052 Sum_probs=189.1
Q ss_pred HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC--CCC-C--C
Q 015890 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK-T--L 148 (398)
Q Consensus 74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~-~--~ 148 (398)
.+.+.+.+.+ ++.+ +++++++|+|+++..++.+++++||+|+++.++|+++...+...|++++++ +. +++ + +
T Consensus 59 ~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~~ 135 (446)
T 2x3l_A 59 ILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFI-ETHQSPLTNHYN 135 (446)
T ss_dssp HHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEEC-EEEECTTTSSEE
T ss_pred HHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEE-eCeeccccCcCC
Confidence 3444455555 5665 679999999999999999999999999999999999999999999999888 55 432 1 3
Q ss_pred CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEE
Q 015890 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~ 225 (398)
.+|++.| +.++ +++|++++ .|++|.+.+ +++|+++|+++|+++|+||+| +.+.+.+......+.++++
T Consensus 136 ~~d~~~l---~~~~--~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~ 206 (446)
T 2x3l_A 136 KVNLSRL---NNDG--HKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVV 206 (446)
T ss_dssp EEEC------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEE
T ss_pred CCCHHHH---cCCC--ceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEE
Confidence 5677777 3333 58999998 456999999 899999999999999999998 3343322222222335889
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHh
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL 303 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l 303 (398)
.|+||+++ ++.++||+++++..-+ ...+..... ....+++....+++..+++..... .++..++..++.+.+++.
T Consensus 207 ~S~~K~l~-~~~g~g~l~~~~~~i~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~- 283 (446)
T 2x3l_A 207 QSFHKTLP-ALTMGSVLYIHKNAPY-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK- 283 (446)
T ss_dssp ECHHHHSS-SCTTCEEEEEETTCTT-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred ECCccccc-cccccEEEEEcCCcCC-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence 99999664 3445799998853211 223322211 123344444444443333321110 122444555555555555
Q ss_pred ccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-cCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890 304 SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 381 (398)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~ 381 (398)
+ +.+..+.++.++++.++ ..+..++.+.|. ++||.+. ++ .+++|++++. .+++++ +++++|.+++
T Consensus 284 ---g-~~~~~~~~~~~l~i~~~--~~~~~~l~~~L~-~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~~ 350 (446)
T 2x3l_A 284 ---G-FEMLQVDDPLKLLIKYE--GFTGHDIQNWFM-NAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKIE 350 (446)
T ss_dssp ---T-CEEEECSSTTEEEEECT--TSCHHHHHHHHH-HTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHHH
T ss_pred ---C-CEECcCCCCeEEEEEeC--CcCHHHHHHHHH-HCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHHH
Confidence 3 35555444557888886 236778888776 6699997 43 4689999987 678889 9999999887
Q ss_pred HHH
Q 015890 382 EEL 384 (398)
Q Consensus 382 ~~~ 384 (398)
+.+
T Consensus 351 ~~~ 353 (446)
T 2x3l_A 351 DMI 353 (446)
T ss_dssp TCC
T ss_pred Hhh
Confidence 655
No 219
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.8e-24 Score=204.33 Aligned_cols=281 Identities=18% Similarity=0.154 Sum_probs=189.0
Q ss_pred cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCC
Q 015890 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS 145 (398)
Q Consensus 70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 145 (398)
..++++.+++++ +.+ ..++++++++|+..++.+++++||+|+++.++|++....+ +..|++++.+ + +.
T Consensus 60 ~~~l~~~la~~~----g~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALE----GGK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-S-RE 131 (421)
T ss_dssp HHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-C-TT
T ss_pred HHHHHHHHHHHh----CCC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C-CC
Confidence 466777777766 443 3455666699999999999999999999999998877654 7789988766 2 21
Q ss_pred CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV 223 (398)
Q Consensus 146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i 223 (398)
+ |++++++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|++| +++.+.+. ..+.++
T Consensus 132 ~----d~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~~---~~~~Di 199 (421)
T 2ctz_A 132 E----RPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRPL---AWGAAL 199 (421)
T ss_dssp C----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCGG---GGTCSE
T ss_pred C----CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCcc---ccCCeE
Confidence 1 7999999998754 99999999999999999 999999999999999999999 45433222 223458
Q ss_pred EEcccccccCCCcceeEEEEccCCcHHH----HHHHHHh--------------------------hccCCCCcchHHHHH
Q 015890 224 NLFSFSKAYGMMGWRVGYIAYPSEVEGF----ATQLLKV--------------------------QDNIPICASIISQHL 273 (398)
Q Consensus 224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~----~~~l~~~--------------------------~~~~~~~~~~~~~~~ 273 (398)
++.|++|.++.+|.++|++++.++.+++ .+.+... ........++...++
T Consensus 200 ~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~ 279 (421)
T 2ctz_A 200 VTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWV 279 (421)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred EEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 8999999999889899987774210111 1112110 011122445555455
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-C-----------------CccEEEEeeCCCCCCChHHHH
Q 015890 274 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----------------EGAIYLWARLPEKHLDDFEVV 335 (398)
Q Consensus 274 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~ 335 (398)
+...++. +..+.++..++.+++.+.|++++.+..+. | ..+..+.+.+.. ..+..
T Consensus 280 ~~~~l~~----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~----~~~~~ 351 (421)
T 2ctz_A 280 VLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG----GYEAA 351 (421)
T ss_dssp HHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT----HHHHH
T ss_pred HHcCcch----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC----CHHHH
Confidence 5555543 44555666678888999998876644431 1 124556667653 12223
Q ss_pred HHHHHhc---CeEEecCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890 336 RWLAHRH---GVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGL 381 (398)
Q Consensus 336 ~~ll~~~---gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~ 381 (398)
..++++. ++.++.|..+ + .++.||+|++. ++++++++.|.+++
T Consensus 352 ~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~---e~~~~li~~l~~al 420 (421)
T 2ctz_A 352 KRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL 420 (421)
T ss_dssp HHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred HHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHh
Confidence 3344343 4444444221 0 14789999886 67888888888765
No 220
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.93 E-value=4.9e-24 Score=200.27 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=218.2
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~ 103 (398)
.+|+.|+||..|. ..++ .+|++.+|+.+++.+.... ..+.....++.+.+++.+ + ..+.+.+++++++|+.
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p-~~~~v~f~~SGsEA~e 157 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P-QIEQLRFTNSGTEANL 157 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C-CCCEEEEeCchHHHHH
Confidence 3578999998764 3343 5899999999998764322 213333344544444443 3 3578999999999999
Q ss_pred HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc------CcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCC
Q 015890 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPG 174 (398)
Q Consensus 104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~ 174 (398)
.+++... ...++|+....+|++....+-.. ......+ |. -|++.+++.++. ...+++|+++..+
T Consensus 158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-p~------nd~~~l~~~l~~~~~~iAavIvEPv~ 230 (454)
T 4ao9_A 158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVL-PY------NDAQTARAQIERHGPEIAVVLVEPMQ 230 (454)
T ss_dssp HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEE-CT------TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccC-CC------chHHHHHHHHhhcCCceEEEEecccc
Confidence 9998875 23478999999998865322111 1122222 21 278899998873 2336888888767
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890 175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 253 (398)
Q Consensus 175 nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 253 (398)
+..|.+ .+++.+++|.++|++||+++|+||++.+..|........+....+.+++|.+| .|+++|+++++ +++++
T Consensus 231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t~gK~lg-gG~Piga~~~~---~ei~~ 306 (454)
T 4ao9_A 231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTTLGKYIG-GGMSFGAFGGR---ADVMA 306 (454)
T ss_dssp STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEEEEGGGG-TTSSCEEEEEC---HHHHG
T ss_pred CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEEeccccC-CCCcceeeeeH---HHHHH
Confidence 778875 56788999999999999999999999433332221111111112337789998 88999999999 78887
Q ss_pred HHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890 254 QLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327 (398)
Q Consensus 254 ~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 327 (398)
.+... ....+++.|+.+.+++.+.|+.. ++.+++..+.-.+.++.|.+.+++.+.+..+... |.++.+.+.+.
T Consensus 307 ~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~m~gi~f~~~ 385 (454)
T 4ao9_A 307 LFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGI-GSLMNAHFVQG 385 (454)
T ss_dssp GGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE-TTEEEEESCCS
T ss_pred HHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee-ceEEEEEEecC
Confidence 66432 23456778899999999988752 2334444444455556666665555554344444 44444444221
Q ss_pred C---------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890 328 H---------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 328 ~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~ 385 (398)
. .+ ...++..++ ++||++.|. +.+.+++. .+++|+++++++|.+++.+..
T Consensus 386 ~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~------~~~~~s~~-~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 386 DVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR------GFVVLSLP-LTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp CCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT------CEEECCTT-CCHHHHHHHHHHHHHHHHHSG
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC------CCEEEeCC-CCHHHHHHHHHHHHHHHHhcc
Confidence 1 01 123445555 789999774 34445555 589999999999999998864
No 221
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.92 E-value=3.2e-24 Score=197.40 Aligned_cols=323 Identities=13% Similarity=0.073 Sum_probs=220.6
Q ss_pred CCCCCcHHHHHHHHHhhcCCC---CCC---CCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEE-ecChHHHHHHHHHHhcc
Q 015890 40 VYWQPPKMAMEKVKELVWDPS---ISK---YGADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLCD 111 (398)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~---~~~---y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~-~~g~t~a~~~~~~~l~~ 111 (398)
...+.|++|++++.+.+.+.. .+. +..+....++.+..++.+++++++++ .+|++ ++|+|+++++++.++..
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~ 99 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIG 99 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGG
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccC
Confidence 566789999999999886411 111 11222234455555555666668764 57888 58999999999999986
Q ss_pred C--CCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 112 A--GDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 112 ~--gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
+ ||+|++...++++ +...++..|..++.+ +.+.. ...+++.++..+++++ ++|.+++..|.||++.| +
T Consensus 100 ~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~-~~~~~-~~~~~~~~~~~i~~~t--~lV~~~h~et~tG~~~p---i- 171 (377)
T 3e77_A 100 LKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH-PKLGS-YTKIPDPSTWNLNPDA--SYVYYCANETVHGVEFD---F- 171 (377)
T ss_dssp GSTTCEEEECCCSHHHHHHHHHHTTTSEEEECS-CCCSS-SCSCCCGGGCCCCTTC--SCEEEESEETTTTEECS---S-
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCceEEe-ccCCC-cCCCCChHHhccCCCc--cEEEEeCccCchheEch---h-
Confidence 5 8999887777654 445667778877766 66533 3456777777777665 89999988899999999 4
Q ss_pred HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCc--------HHHHH-HHHH
Q 015890 188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFAT-QLLK 257 (398)
Q Consensus 188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~--------~~~~~-~l~~ 257 (398)
+|+++|+++++|.++ ++...... ...+ +++.|.+|++|++| +|+++.+++. +.+.+ ....
T Consensus 172 ----i~~~~~~~~~vD~~q~~g~~~id~--~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~ 241 (377)
T 3e77_A 172 ----IPDVKGAVLVCDMSSNFLSKPVDV--SKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQA 241 (377)
T ss_dssp ----CCCCTTCCEEEECTTTTTSSCCCG--GGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHH
T ss_pred ----hhccCCCEEEEEcccccCCCCCch--hhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHh
Confidence 367899999999999 66533332 2233 46789999999888 5777776422 11111 0011
Q ss_pred hhccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCcccc--C--CccEEEEeeCCCCCCC-
Q 015890 258 VQDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARLPEKHLD- 330 (398)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~--~~~~~~~~~~~~~~~~- 330 (398)
.......+++.+...++.++++... . .++++.++.+++.+++++.|++++++.+.. + ..+..+.+.++....+
T Consensus 242 ~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~ 321 (377)
T 3e77_A 242 GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDD 321 (377)
T ss_dssp TTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCH
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCch
Confidence 1122356788888888888887522 3 578888899999999999999886544322 1 2233455666532111
Q ss_pred --hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 331 --DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 331 --~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
+..+...+. ++||.+++|.. ..+.+|+|+.. .+++|++++++.|++++++
T Consensus 322 ~~~~~~l~~l~-~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 322 ALEKRFLDKAL-ELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp HHHHHHHHHHH-HTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-HCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 134556554 78999988753 35679999988 7999999999999988765
No 222
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=1.3e-23 Score=192.65 Aligned_cols=323 Identities=13% Similarity=0.106 Sum_probs=220.6
Q ss_pred CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCC---CCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE-ecChHHH
Q 015890 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKY---GADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQA 101 (398)
Q Consensus 30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y---~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~-~~g~t~a 101 (398)
+..++|+.| +.+.|++|++++.+.+.+.. .+.| .......++.+..++.++++++++ +.+|+| |+|+|++
T Consensus 4 ~~~~~f~pg--pt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a 81 (361)
T 3m5u_A 4 MRKINFSAG--PSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQ 81 (361)
T ss_dssp CCCEECCSS--SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHH
T ss_pred cceEeecCC--CCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHH
Confidence 456677766 55678999999999875311 1111 112222344555555566666875 457888 9999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCc--ChhhHHHhcCcEEEEeccCCCCC-CCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890 102 FVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (398)
Q Consensus 102 ~~~~~~~l~~~gd~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG 178 (398)
+++++.++. +||++++...+++ .+...++..|+++..+ +.+.++ +.++++. + +++++ ++|.+++..|.||
T Consensus 82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~-~~~~~g~~~~~~~~-~--l~~~t--~lv~~~~~e~~tG 154 (361)
T 3m5u_A 82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTV-ASSEESNFDHIPRV-E--FSDNA--DYAYICSNNTIYG 154 (361)
T ss_dssp HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEE-EECTTTTSCSCCCC-C--CCTTS--SEEEEESEETTTT
T ss_pred HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEE-ecccCcCCCcCChh-h--cCCCC--CEEEEeCCCCCcc
Confidence 999999998 7887643333332 3445667789998888 777665 2245555 4 77654 9999998888999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890 179 TYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257 (398)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~ 257 (398)
++.+. +++ +|+++++|.++ ++....... +-++++.|.+|++|++| +|+++.+ +++.+.+..
T Consensus 155 ~~~~~--------i~~-~~~~~~vD~~q~~g~~~id~~----~~d~~~~s~~K~~gp~G--~g~l~~~---~~~~~~~~~ 216 (361)
T 3m5u_A 155 TQYQN--------YPK-TKTPLIVDASSDFFSRKVDFS----NIALFYGGVQKNAGISG--LSCIFIR---KDMLERSKN 216 (361)
T ss_dssp EECSS--------CCC-CSSCEEEECGGGTTSSCCCCT----TEEEEEEETTTTSSCTT--CEEEEEE---HHHHHHHHT
T ss_pred eeCCc--------ccc-cCCEEEEEcccccCCCCCCcc----cCCEEEEechhccCCCc--cEEEEEc---HHHHhhhcC
Confidence 98762 233 49999999999 655333222 13478889999999777 5888888 677665543
Q ss_pred -----------h--hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCC-cccc-C--CccE
Q 015890 258 -----------V--QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEG-AVKG-G--EGAI 318 (398)
Q Consensus 258 -----------~--~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~--~~~~ 318 (398)
. ......|+|.+...++.++++... . .+++..++.+++.+++++.|++++++ .... + ....
T Consensus 217 ~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ 296 (361)
T 3m5u_A 217 KQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLM 296 (361)
T ss_dssp CCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSS
T ss_pred CCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCe
Confidence 0 122345778888888888887522 2 37888888999999999999988853 3322 1 1123
Q ss_pred EEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 319 YLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 319 ~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+.+.++. ...+ .++...| +++||.+++|... .+.+|+|++. .+.+|++++++.|+++.++
T Consensus 297 ivsf~~~~~~~~~-~~~~~~L-~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 297 NVSFNIAKNKDLE-PLFVKEA-EEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EEEEEESSCTTHH-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchhhh-HHHHHHH-HHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 45566653 1112 4566555 6889999887542 3569999998 7999999999999988765
No 223
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.92 E-value=2e-23 Score=197.05 Aligned_cols=346 Identities=14% Similarity=0.076 Sum_probs=224.6
Q ss_pred HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..| ...++ .+|++.+|+.+++.+.....+... ..+....+++.+.+..+.+ .+.+++++++++|+
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~ 138 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVT--PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAV 138 (456)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTS--CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCcc--CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHH
Confidence 358899999876 44454 589999999998865321111111 1233345566665555433 46789999999999
Q ss_pred HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C-------------cEEEEeccCCC-----CCCCCChHHHHHhh--
Q 015890 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-------------VTHILVGPCSS-----KTLHPDADWLEKTL-- 159 (398)
Q Consensus 103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~-----~~~~~d~e~l~~~l-- 159 (398)
+.+++... ....+|+....+|++....+... + ..+..+ |.+. .....+.+.+++.+
T Consensus 139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 217 (456)
T 4atq_A 139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRM-PMSYPFREENPEITGAEAAKRAITM 217 (456)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCGGGCSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceec-ccccccccCCCcccHHHHHHHHHHH
Confidence 99998764 33479999999999876433221 1 123333 3211 00011233333322
Q ss_pred -----ccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890 160 -----ETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA 231 (398)
Q Consensus 160 -----~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~ 231 (398)
...+ +++|+++..+...|.+ .+++.++++.++|++||+++|+||++ |+..|........+....+-+++|.
T Consensus 218 ~e~~~~~~~-iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~ 296 (456)
T 4atq_A 218 IEKQIGGDQ-VAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKG 296 (456)
T ss_dssp HHHHTCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGG
T ss_pred HHHhhcCCc-eEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhc
Confidence 2333 7889999777778875 56789999999999999999999999 6666654443333222224477899
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCC-
Q 015890 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGE- 308 (398)
Q Consensus 232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~- 308 (398)
+| .|+++|.++++ +++.+.+.......+++.++.+.+++.+.|+..+ +..++..+.-....+.|.+..++++.
T Consensus 297 lg-gg~P~~av~~~---~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~ 372 (456)
T 4atq_A 297 IA-GGLPLSAITGR---ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAG 372 (456)
T ss_dssp GG-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred cc-CcCCceeeEec---HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 97 88999999999 7888777666667788999999999999987522 23333333333344555555444332
Q ss_pred ----CccccCCccEEEEeeCCCCCC---C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890 309 ----GAVKGGEGAIYLWARLPEKHL---D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 377 (398)
Q Consensus 309 ----~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 377 (398)
+.-+... |.++.+++.+... + ...++..++ ++|+++.++.. ..+.|||.... .+++++++++++|
T Consensus 373 ~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~l 448 (456)
T 4atq_A 373 GGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEVL 448 (456)
T ss_dssp ---CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred cCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 2223344 5566666632211 1 234666665 89999876432 24689999776 7999999999999
Q ss_pred HHHHHHH
Q 015890 378 RRGLEEL 384 (398)
Q Consensus 378 ~~~~~~~ 384 (398)
.+++++.
T Consensus 449 ~~al~a~ 455 (456)
T 4atq_A 449 AAAIKAH 455 (456)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9999863
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=8.1e-23 Score=202.88 Aligned_cols=303 Identities=11% Similarity=0.011 Sum_probs=202.5
Q ss_pred CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEeccCCC
Q 015890 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSS 145 (398)
Q Consensus 67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~ 145 (398)
.....++++.+++++ |.+ ..+++++|+++++..++.+++++||+|+++.++|.++... ++..|++++.+ +...
T Consensus 172 ~~~i~e~e~~lA~~~----gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v-~~~~ 245 (730)
T 1c4k_A 172 EGPAVAAEKHAARVY----NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYL-QTNR 245 (730)
T ss_dssp BTHHHHHHHHHHHHT----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEE-CEEE
T ss_pred hHHHHHHHHHHHHHH----CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEE-eCCc
Confidence 334466777776665 654 3478889999999999999999999999999999988887 78889998887 5432
Q ss_pred CCC----CCChHHH-----HHhhccC------C-CC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890 146 KTL----HPDADWL-----EKTLETK------P-TP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206 (398)
Q Consensus 146 ~~~----~~d~e~l-----~~~l~~~------~-~~-~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-- 206 (398)
+.+ .+|+++| +++++++ + .+ +++++++| |++|.+.+ +++|+++|+++|+++|+||+|
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence 222 3688888 8888754 2 23 89999998 58999999 999999999999999999999
Q ss_pred -eccCCCc-----ccc----ccCCcEEEEcccccccCCCccee-EEEEccCCc----HHH--HHHHHHhh-ccCCCCcch
Q 015890 207 -FMYDGRK-----HCC----VEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEV----EGF--ATQLLKVQ-DNIPICASI 268 (398)
Q Consensus 207 -~~~~~~~-----~~~----~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~----~~~--~~~l~~~~-~~~~~~~~~ 268 (398)
+.+.+.. ... ...++++++.|+||+++ |++. |++++++.. +.. ...+.... ...+.+++.
T Consensus 322 ~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 322 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCH
T ss_pred ccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcH
Confidence 2343211 111 11235689999999875 5554 456444310 000 12222211 122345555
Q ss_pred HHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhcc-CCCCccccCC-------------------------------
Q 015890 269 ISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSP-LGEGAVKGGE------------------------------- 315 (398)
Q Consensus 269 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~------------------------------- 315 (398)
...+++..+++.... ...+..++..++.+.+++.|++ ++++++..+.
T Consensus 400 ~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (730)
T 1c4k_A 400 PMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWH 479 (730)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTT
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhc
Confidence 555555555543112 3455566777777778877776 4444443321
Q ss_pred ------cc-EE-----EEeeCCC----------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890 316 ------GA-IY-----LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA 372 (398)
Q Consensus 316 ------~~-~~-----~~~~~~~----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~ 372 (398)
.+ ++ +.+..+. ...+..++.++|. ++||.+... ....+|++++. .+.+++++
T Consensus 480 g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~-e~GI~v~~~----~~~~ir~~~s~g~t~e~i~~ 554 (730)
T 1c4k_A 480 AYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLR-DHGIIPEKS----DLNSILFLMTPAETPAKMNN 554 (730)
T ss_dssp CCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHH-HTTCCCSEE----CSSEEEEECCTTCCHHHHHH
T ss_pred cccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHH-HCCcEEEEC----CCCeEEEEeCCCCCHHHHHH
Confidence 11 11 3455531 1235677777775 679988653 35789999888 78999999
Q ss_pred HHHHHHHHHHHHhc
Q 015890 373 AADRLRRGLEELVK 386 (398)
Q Consensus 373 ~~~~l~~~~~~~~~ 386 (398)
++++|.+..+.+.+
T Consensus 555 Ll~aL~~i~~~~~~ 568 (730)
T 1c4k_A 555 LITQLLQLQRLIEE 568 (730)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccc
Confidence 99999999887643
No 225
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.92 E-value=3.1e-24 Score=198.61 Aligned_cols=317 Identities=12% Similarity=0.039 Sum_probs=210.5
Q ss_pred CCCCcHHHHHHHHHhhcCCC---CC-----CCC--CCCCcHHHHHHHHHHHhhhcCCCC-CcEEE-ecChHHHHHHHHHH
Q 015890 41 YWQPPKMAMEKVKELVWDPS---IS-----KYG--ADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLT 108 (398)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~---~~-----~y~--~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~-~~g~t~a~~~~~~~ 108 (398)
+.+.|++|++++.+.+.+.. .+ ..+ ...-..+.|+.+++++ +++. .+|++ ++|+|+++++++.+
T Consensus 35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~~~~~~evif~t~~~T~a~n~ai~~ 110 (386)
T 3qm2_A 35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----NIPSNYKVLFCHGGGRGQFAGVPLN 110 (386)
T ss_dssp SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----TCCTTEEEEEEESCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHHh
Confidence 44578999999988764311 11 111 1244566777777776 6643 46888 68999999999999
Q ss_pred hccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC-CCH
Q 015890 109 LCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPE 183 (398)
Q Consensus 109 l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~-~~~ 183 (398)
+.++||+|++...++++ +...++..| ++..+ +.+ ++|..++++.++..+++++ ++|.+++..|.||++ .|
T Consensus 111 l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v-~~~~~~~G~~~~~~~~~~~l~~~t--~lV~~~h~et~tG~~i~p- 185 (386)
T 3qm2_A 111 LLGDKTTADYVDAGYWAASAIKEAKKYC-APQII-DAKITVDGKRAVKPMREWQLSDNA--AYLHYCPNETIDGIAIDE- 185 (386)
T ss_dssp HCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEE-ECEEEETTEEEECCGGGCCCCTTC--SCEEECSEETTTTEECCC-
T ss_pred ccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE-ecCcccCCCCCCchHHHhhcCCCC--cEEEEECCcCCcCEecCc-
Confidence 99999998766555544 445567778 88888 776 5564467788888888765 889988888889996 78
Q ss_pred HHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCc--------HHHHHH
Q 015890 184 RLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFATQ 254 (398)
Q Consensus 184 ~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~--------~~~~~~ 254 (398)
+++|. +|+++++|.++ ++....... ..+ +++.|.+|++|++| +|+++++++. +.+.+.
T Consensus 186 --i~~i~-----~g~~~~vDa~qs~g~~pidv~--~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~ 252 (386)
T 3qm2_A 186 --TPDFG-----PEVVVTADFSSTILSAPLDVS--RYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDY 252 (386)
T ss_dssp --CCCCC-----TTCCEEEECTTTTTSSCCCGG--GCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCH
T ss_pred --hhhhc-----CCCEEEEEcccccCCCCCCcc--ccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHH
Confidence 55553 79999999999 665333322 233 46689999999777 6888777421 101100
Q ss_pred H-HHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccc-c--CCccEEEEeeCCCCC
Q 015890 255 L-LKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVK-G--GEGAIYLWARLPEKH 328 (398)
Q Consensus 255 l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~--~~~~~~~~~~~~~~~ 328 (398)
- .........|+|.+...++.++++...+ .+++..++.+++++++++.|++++..... . ......+.+.++...
T Consensus 253 ~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~ 332 (386)
T 3qm2_A 253 TVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNT 332 (386)
T ss_dssp HHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGG
T ss_pred HHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcc
Confidence 0 0011122346777788888888775333 47888888999999999999887642221 1 122345566665322
Q ss_pred CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890 329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 383 (398)
Q Consensus 329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~ 383 (398)
.+ ..+...| +++||.++.|..+ .+.+|+|+.. .+++|++++++.|+++.++
T Consensus 333 ~~-~~~~~~L-~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 333 LD-KVFLEES-FAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp GH-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cc-HHHHHHH-HHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 22 5666665 6899999887644 3569999988 7899999999999988765
No 226
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=2.3e-23 Score=194.55 Aligned_cols=271 Identities=15% Similarity=0.099 Sum_probs=187.2
Q ss_pred cHHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE---ecChHHHHHHHHHHhccCCCE
Q 015890 45 PKMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDS 115 (398)
Q Consensus 45 ~~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~ 115 (398)
..++++++.+.... ...+.| +..+..++++.+++++ +. +..++ ++|+++|+..++.+++++||+
T Consensus 31 ~~~vl~a~~~~~~~~~~~~~~~~~~y-~~~~~~~Le~~lA~l~----g~--e~alv~p~~~sGt~Ai~~al~all~~GD~ 103 (409)
T 3jzl_A 31 QAKVLDAFQENKVSDFHFHPSTGYGY-DDEGRDTLERVYATVF----KT--EAALVRPQIISGTHAISTVLFGILRPDDE 103 (409)
T ss_dssp HHHHHHHHHHTTCCGGGGCCCCTTCT-TCHHHHHHHHHHHHHH----TC--SEEEEETTSCSHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHHhhhhhhccCCCcCCCC-ChhHHHHHHHHHHHHh----CC--CcEEEECCCccHHHHHHHHHHHhcCCCCE
Confidence 36788888875421 113334 2334556666666665 54 33444 889999999999999999999
Q ss_pred EEEeC-CCCcChhh----------HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccC
Q 015890 116 VVMFA-PYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTY 180 (398)
Q Consensus 116 Vl~~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~ 180 (398)
|+++. +.|.++.. .++..|++++.+ +.+++ +.+|++++++++++++ ++|++++ |+||||.+
T Consensus 104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v-~~~~~-g~~d~e~l~~ai~~~t--klV~i~~s~g~p~nptg~v 179 (409)
T 3jzl_A 104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV-PLLEN-GDVDFPRIAKKMTPKT--KMIGIQRSRGYADRPSFTI 179 (409)
T ss_dssp EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC-CCCTT-SCCCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCH
T ss_pred EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe-CCCCC-CCcCHHHHHHhccCCC--eEEEEECCCCCCCCCcCcc
Confidence 99998 99988774 446779999998 77654 5789999999998764 9999999 99999988
Q ss_pred CCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHH
Q 015890 181 IPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l 255 (398)
.+ +++|+++|++ +|+++|+|++| +.+...+ . ..+.+++++|+||.+|.+| ...||++++ +++++.+
T Consensus 180 ~~---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p-~--~~g~Div~~S~sK~lgg~~~~~GG~v~~~---~~li~~l 250 (409)
T 3jzl_A 180 EK---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP-P--EVGADIIAGSLIKNPGGGLAKTGGYIAGK---EALVDLC 250 (409)
T ss_dssp HH---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS-G--GGTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHH
T ss_pred cc---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc-c--ccCCeEEEECccccCCccCCceEEEEEeC---HHHHHHH
Confidence 66 9999999999 99999999999 3222211 1 1234588999999998554 346999998 8899888
Q ss_pred HHhhccC----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEEEEeeCCCC
Q 015890 256 LKVQDNI----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLWARLPEK 327 (398)
Q Consensus 256 ~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~ 327 (398)
....... ..+.......++...+. ....+.++..+++..+.+.|+++|. .+++... ...+.+.+..
T Consensus 251 ~~~~~~~~~g~~~g~~~~~~~~~l~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~- 324 (409)
T 3jzl_A 251 GYRLTTPGIGREAGASLYSLLEMYQGFF----LAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHN- 324 (409)
T ss_dssp HHHHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSC-
T ss_pred HHHhccccccccccccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCC-
Confidence 7643211 11221211233333332 3456777788889999999999887 5543221 1255566652
Q ss_pred CCChHHHHHHHHHhc
Q 015890 328 HLDDFEVVRWLAHRH 342 (398)
Q Consensus 328 ~~~~~~~~~~ll~~~ 342 (398)
......+++.|. ..
T Consensus 325 ~~~~~~~~~~L~-~~ 338 (409)
T 3jzl_A 325 KEKMVAFAQAIQ-AA 338 (409)
T ss_dssp HHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHH-hc
Confidence 224456677664 44
No 227
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.91 E-value=1.8e-22 Score=191.23 Aligned_cols=345 Identities=13% Similarity=0.090 Sum_probs=225.0
Q ss_pred HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCC-CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADE-GLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (398)
Q Consensus 27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~-~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~ 102 (398)
.+|+.|+||..|. ..++ -+|++.+|+.+++.+. ..|.... ...+....+++.|.+..+.+.+.|++++|+++|+
T Consensus 64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l--~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~ 141 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERF--PGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAN 141 (473)
T ss_dssp TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHC--CCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHH
T ss_pred CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhc--ccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHH
Confidence 3588999998764 3333 5899999999998762 2222221 1234455677777766665667899999999999
Q ss_pred HHHHHHhc-------cCC-CEEEEeCCCCcChhhHHHhc-C-----------cEEEEeccCCC------CCCC------C
Q 015890 103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQMT-G-----------VTHILVGPCSS------KTLH------P 150 (398)
Q Consensus 103 ~~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~~-g-----------~~~~~~~~~~~------~~~~------~ 150 (398)
+.+++... +++ .+|+....+|++....+-.. | .....+ +.+. .+.. .
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 220 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHL-TCPHYWRYGEEGETEEQFVAR 220 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEE-CCCCHHHHSCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCccccc-CCCcccccccccchhhHHHHH
Confidence 99998753 133 57999999998855433211 1 112222 2211 1100 0
Q ss_pred ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890 151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL 225 (398)
Q Consensus 151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~ 225 (398)
..+++++.+.. ...+++|+++..+...|++ .+++.+++|.++|++||+++|.||++ |+..|........+....+
T Consensus 221 ~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi 300 (473)
T 4e3q_A 221 LARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDA 300 (473)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSE
T ss_pred HHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCCh
Confidence 12345555541 1226788888777778875 56779999999999999999999999 6666655443332222224
Q ss_pred cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890 226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN 295 (398)
Q Consensus 226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ 295 (398)
.+++|.++ .| +++|.++++ +++.+.+... ....+++.++.+.+++.+.|+.. ++.+++..+.-...
T Consensus 301 ~t~~K~l~-gG~~Pl~av~~~---~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l 376 (473)
T 4e3q_A 301 IISSKNLT-AGFFPMGAVILG---PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRF 376 (473)
T ss_dssp EEECGGGG-TTSSCCEEEEEC---HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred HHhccccc-CCCCCccccccc---HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHH
Confidence 47789997 55 899999999 7887776432 24567888999999999988752 23334444444444
Q ss_pred HHHHHHHhccCCCCccccCCccEEEEeeCCCCC----------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890 296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 364 (398)
Q Consensus 296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~- 364 (398)
++.|.+ |.+.+.+.-+... |+++.+++.+.. .-...+...++ ++|+++++. .+.+|++...
T Consensus 377 ~~~L~~-l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~~i~l~PPL~ 448 (473)
T 4e3q_A 377 EERLKH-IAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCT-DLGLICRPL-----GQSVVLCPPFI 448 (473)
T ss_dssp HHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTT
T ss_pred HHHHHH-HhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCC
Confidence 455544 3334443333344 555555553211 01334566554 899999874 3689998776
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015890 365 LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+++++++++++|.++++++..
T Consensus 449 it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 449 LTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999998765
No 228
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=3.5e-23 Score=193.95 Aligned_cols=270 Identities=14% Similarity=0.063 Sum_probs=185.1
Q ss_pred HHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE--ecChHHHHHHHHHHhccCCCEEE
Q 015890 46 KMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV--TAGANQAFVNIVLTLCDAGDSVV 117 (398)
Q Consensus 46 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~--~~g~t~a~~~~~~~l~~~gd~Vl 117 (398)
+.|++++.+.... ...+.| +..+..++++.+++++ |.+.. +++ ++|+++|+..++.+++++||+|+
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y-~~~~~~~Le~~lA~l~----g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl 119 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGY-GDIGRDSLDAVYARVF----NTESA-LVRPHFVNGTHALGAALFGNLRPGNTML 119 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----TCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEE
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCC-CHHHHHHHHHHHHHHh----CCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEE
Confidence 6788888764311 112333 3334556666666665 54332 333 78889999999999999999999
Q ss_pred EeC-CCCcChh-----------hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccCC
Q 015890 118 MFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYI 181 (398)
Q Consensus 118 ~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~~ 181 (398)
++. +.|.++. ..++..|++++.+ +.++++ .+|++.++++++....+++|++++ |+||+|.+.
T Consensus 120 ~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~~~~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~ 197 (427)
T 3i16_A 120 SVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV-DLKEDG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE 197 (427)
T ss_dssp ESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC-CCCTTS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH
T ss_pred EeCCCccHHHHHHHhccccchHHHHHHcCCEEEEe-cCccCC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH
Confidence 998 9998776 3456679999998 776554 689999999998312259999998 999998875
Q ss_pred CHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHH
Q 015890 182 PERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLL 256 (398)
Q Consensus 182 ~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~ 256 (398)
+ +++|+++|++ +|+++++|++| +.+...+. ..+.+++++|+||.+|.+| .+.||++++ +++++.+.
T Consensus 198 d---l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~gG~i~~~---~~li~~l~ 268 (427)
T 3i16_A 198 D---IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT---DVGADLIAGSLIKNIGGGIAPTGGYLAGT---KDCIEKTS 268 (427)
T ss_dssp H---HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHH
T ss_pred H---HHHHHHHHHHhCCCCEEEEECCCccccccCCcc---ccCCeEEEecCcccCCCCCCceEEEEEEC---HHHHHHHH
Confidence 5 9999999999 99999999999 32222211 1234588999999998555 567999998 89999887
Q ss_pred HhhccCCCC--cch-HH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE-----EEEeeCCCC
Q 015890 257 KVQDNIPIC--ASI-IS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI-----YLWARLPEK 327 (398)
Q Consensus 257 ~~~~~~~~~--~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~ 327 (398)
........+ .++ .. ...+...+ .....+.++..+++..+.+.|+++|. .+++.. +. .+.+.+..
T Consensus 269 ~~~~~~~~g~~~~~~~~~a~~~l~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~-~~~~~~~i~~i~l~~- 341 (427)
T 3i16_A 269 YRLTVPGIGGECGSTFGVVRSMYQGL----FLAPHISMEALKGAILCSRIMELAGF-EVMPKY-DEKRSDIIQSIKFND- 341 (427)
T ss_dssp HHHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCT-TSCCSSSCEEEECSS-
T ss_pred HhcccCccCccCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCC-CCCCccEEEEEEECC-
Confidence 643211221 111 21 22222222 33567778888899999999999887 554432 33 56666642
Q ss_pred CCChHHHHHHHH
Q 015890 328 HLDDFEVVRWLA 339 (398)
Q Consensus 328 ~~~~~~~~~~ll 339 (398)
......+++.|.
T Consensus 342 ~~~~~~f~~~l~ 353 (427)
T 3i16_A 342 KDKLIEFCKGIQ 353 (427)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 223455666664
No 229
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=1.2e-22 Score=190.31 Aligned_cols=269 Identities=16% Similarity=0.089 Sum_probs=183.7
Q ss_pred HHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE---ecChHHHHHHHHHHhccCCCEE
Q 015890 46 KMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSV 116 (398)
Q Consensus 46 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~V 116 (398)
+.|++++.+.... ...+.| +..+..++++.+++++ +. +..++ ++|+++|+..++.+++++||+|
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~----g~--e~alv~p~~~sGt~A~~~al~all~pGD~V 119 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIF----NT--ESAFVRPHFVNGTHAIGAALFGNLRPNDTM 119 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----TC--SEEEEETTCCSHHHHHHHHHHHTCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHh----CC--CceEEeCCCCcHHHHHHHHHHHhcCCCCEE
Confidence 7888888875432 112334 2335566666666665 54 33455 7888999999999999999999
Q ss_pred EEeC-CCCcChh-----------hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccC
Q 015890 117 VMFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTY 180 (398)
Q Consensus 117 l~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~ 180 (398)
++++ +.|.++. ..++..|++++.+ +. +++.+|++++++++++..++++|++++ |+||||.+
T Consensus 120 l~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v 196 (427)
T 3hvy_A 120 MSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV-DL--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI 196 (427)
T ss_dssp EECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC-CC--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH
T ss_pred EEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe-cC--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccH
Confidence 9998 9998776 3456679999988 66 345789999999998311259999999 99999887
Q ss_pred CCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHH
Q 015890 181 IPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQL 255 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l 255 (398)
.+ +++|+++|++ +|+++++|++| +.+...+. ..+.+++++|+||.+|.+| .+.||++++ +++++++
T Consensus 197 ~d---l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~GG~i~~~---~~li~~l 267 (427)
T 3hvy_A 197 AE---IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT---DVGADIIAGSLIKNIGGGIATTGGYIAGK---EEYVTQA 267 (427)
T ss_dssp HH---HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHH
T ss_pred HH---HHHHHHHHHHhCCCCEEEEECCccccccCCCCc---ccCCeEEEECCcccccccccceEEEEEEC---HHHHHHH
Confidence 65 9999999999 89999999999 32222221 2234588999999997444 456999998 8899988
Q ss_pred HHhhccCCCC--c-chHH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEEEEeeCCCC
Q 015890 256 LKVQDNIPIC--A-SIIS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLWARLPEK 327 (398)
Q Consensus 256 ~~~~~~~~~~--~-~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~ 327 (398)
.........+ . +++. ...+...+ .....+.++..+++..+.+.|+++|. .+++... ...+.+.+..
T Consensus 268 ~~~~~~~~~g~~~~~~~~~a~~~~~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~- 341 (427)
T 3hvy_A 268 TFRVTVPGIGGECGSTFGVMRSLYEGL----FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFND- 341 (427)
T ss_dssp HHHHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSS-
T ss_pred HHHhhcCCcccccCCCHHHHHHHHHhH----hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCC-
Confidence 7643211111 1 1122 22233333 22456777788889999999998887 5543321 1266667652
Q ss_pred CCChHHHHHHHH
Q 015890 328 HLDDFEVVRWLA 339 (398)
Q Consensus 328 ~~~~~~~~~~ll 339 (398)
......+++.|.
T Consensus 342 ~~~~~~f~~~l~ 353 (427)
T 3hvy_A 342 EKKLIDFIKGIQ 353 (427)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 223445666553
No 230
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=1e-22 Score=203.96 Aligned_cols=298 Identities=15% Similarity=0.094 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCC--
Q 015890 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL-- 148 (398)
Q Consensus 71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 148 (398)
.++++.+++++ |.+ +.+++++|+++++..++.+++++||+|+++.++|.++...+...|++++.+ +.+.+.+
T Consensus 208 ~~~ee~la~l~----G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v-~~~~~~~g~ 281 (755)
T 2vyc_A 208 GESEKYAARVF----GAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM-VPSRNRYGI 281 (755)
T ss_dssp HHHHHHHHHHH----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE-CCCBCTTSC
T ss_pred HHHHHHHHHHh----CCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCCCCcccc
Confidence 44555555555 654 457888999999999999999999999999999999888889999999988 6543322
Q ss_pred --CC-----ChHHHHHhhccCCC--------CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC
Q 015890 149 --HP-----DADWLEKTLETKPT--------PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD 210 (398)
Q Consensus 149 --~~-----d~e~l~~~l~~~~~--------~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~ 210 (398)
.+ |++.|++++++.+. ++++++++| ||+|.+.+ +++|+++|+++|+++++|++| +.+.
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~ 357 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccC
Confidence 24 99999999975322 248999998 79999999 999999999999999999999 2332
Q ss_pred CC-----c-cc--cc-cCCcEEEEcccccccCCCcce-eEEEEccCCcHHH-HHHHHHh-hccCCCCcchHHHHHHHHHh
Q 015890 211 GR-----K-HC--CV-EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGF-ATQLLKV-QDNIPICASIISQHLALYSL 278 (398)
Q Consensus 211 ~~-----~-~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~l 278 (398)
+. . .. .. ..++++++.|+||+++ |++ .|++++++....+ ...+... ....+.+++.+..+++..++
T Consensus 358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~ 435 (755)
T 2vyc_A 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAV 435 (755)
T ss_dssp GGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHH
T ss_pred cccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 21 1 11 11 2345678999999874 555 5667666420001 1122221 11223455666666655555
Q ss_pred cCCc-hHHHHHHHHHHHHHHHHHHHhccCCC---------CccccCC---------------------------------
Q 015890 279 QTGP-EWVTERVKDLVRNREIIREALSPLGE---------GAVKGGE--------------------------------- 315 (398)
Q Consensus 279 ~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~~--------------------------------- 315 (398)
+... ...++..++..++.+.+++.|+++++ +++..+.
T Consensus 436 ~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (755)
T 2vyc_A 436 SMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPG 515 (755)
T ss_dssp HHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTT
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcc
Confidence 5311 11334445555555555555543322 2222211
Q ss_pred ----------cc------EEEEeeCCCC---------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890 316 ----------GA------IYLWARLPEK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 369 (398)
Q Consensus 316 ----------~~------~~~~~~~~~~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 369 (398)
.+ .-+.+.++.. ..+..++.+.| +++||.+... ..+.+|+.++. .+.++
T Consensus 516 ~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~~~~~g~t~~~ 590 (755)
T 2vyc_A 516 ESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMFLFSMGVTRGK 590 (755)
T ss_dssp CTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEEECCTTCCTTT
T ss_pred cccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEEEECCCCCHHH
Confidence 11 2334444421 12346777766 5799988543 46789999888 89999
Q ss_pred HHHHHHHHHHHHHHHh
Q 015890 370 CKAAADRLRRGLEELV 385 (398)
Q Consensus 370 ~~~~~~~l~~~~~~~~ 385 (398)
++.++++|.+..+.+.
T Consensus 591 ~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 591 WGTLVNTLCSFKRHYD 606 (755)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999998877654
No 231
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=1.2e-22 Score=191.40 Aligned_cols=275 Identities=14% Similarity=0.091 Sum_probs=186.3
Q ss_pred cHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890 45 PKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (398)
Q Consensus 45 ~~~v~~a~~~~~~~~~----~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~ 118 (398)
.+.+++++.+...... ...|.. ....++.+.+.+.+.++.+.. +++++ |+++|+..++.+++++||+|++
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~~y---~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~ 112 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGYGY---DDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLY 112 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCC---SCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHhchhhhhcCCCCCCCC---ChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEE
Confidence 4678888877532211 111211 123466777777776676533 22344 6789999999999999999999
Q ss_pred eC-CCCcChhhHH----------HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015890 119 FA-PYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL 186 (398)
Q Consensus 119 ~~-p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l 186 (398)
+. |.|..+...+ +..|++++.+ +.+++ +.+|+++|++.+++++ ++|+++ +|+||+|...+.+++
T Consensus 113 ~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v-~~~~~-~~~d~e~l~~~l~~~t--k~V~i~~sp~np~~~~~~~~~l 188 (431)
T 3ht4_A 113 ITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV-PLTEG-GLVDFEAVAAAIHSNT--KMIGIQRSKGYATRPSFTISQI 188 (431)
T ss_dssp CSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC-CBCTT-SSBCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHHH
T ss_pred eCCCCchhHHHHHhhcccccchHHHcCCEEEEe-CCCCC-CCcCHHHHHhhcCCCC--eEEEEECCCCCCCCCcCCHHHH
Confidence 98 9998877544 4578999999 77655 5789999999998754 999999 599999999999999
Q ss_pred HHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890 187 KRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDN 261 (398)
Q Consensus 187 ~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~ 261 (398)
++|+++|++ +|+++|+|++| +.+...+. ..+.+++++|++|.+|. .+...||++++ +++++.+......
T Consensus 189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~~~~~ 262 (431)
T 3ht4_A 189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGK---EQYVEACAYRLTS 262 (431)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHHHHSC
T ss_pred HHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEec---HHHHHHHHHHhcc
Confidence 999999999 99999999999 33322221 12345889999999763 12444999998 8888888764432
Q ss_pred CCC----CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCCCCCCChHH
Q 015890 262 IPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHLDDFE 333 (398)
Q Consensus 262 ~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 333 (398)
... +.+.....++...+. ....+.++..+++..+.+.|++++. .+.+.. .+..+.+.++.. ....+
T Consensus 263 ~~~g~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~-~~~~~ 336 (431)
T 3ht4_A 263 PGIGAEAGASLYSLQEMYQGFF----LAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDK-DRMIA 336 (431)
T ss_dssp TTTTTSCSCCCSCSHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCH-HHHHH
T ss_pred CCcccccCccHHHHHHHHhHhh----hHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCH-HHHHH
Confidence 111 111111222333332 2456667778888888888888776 443322 122556666521 23456
Q ss_pred HHHHHH
Q 015890 334 VVRWLA 339 (398)
Q Consensus 334 ~~~~ll 339 (398)
+++.+.
T Consensus 337 ~~~~l~ 342 (431)
T 3ht4_A 337 FCQAIQ 342 (431)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666664
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.89 E-value=4.3e-21 Score=174.97 Aligned_cols=358 Identities=16% Similarity=0.134 Sum_probs=240.8
Q ss_pred hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhh
Q 015890 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQE 84 (398)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~ 84 (398)
+.+.|...+..+.+.....+.-++|--..|. .++.|++++-..+.+.-.-+| +-.....+++....+..+++
T Consensus 35 l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~--~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~l 112 (490)
T 3ou5_A 35 LSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHcCceEecCCCc--CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence 3455666777777777777788998877766 479999998887765322223 22344566777777778888
Q ss_pred cCCCCC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH--------HhcC--cEEEEeccCCCCCCCC
Q 015890 85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHP 150 (398)
Q Consensus 85 ~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~ 150 (398)
++.+.. ||-..+ ++.|+..++.++++|||+|+..+..+.++...- ...| .+.+.+ ++++++..+
T Consensus 113 F~a~~A~w~VNVQP~S-Gs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y-~vd~~t~~I 190 (490)
T 3ou5_A 113 FDLDPAQWGVNVQPYS-GSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI 190 (490)
T ss_dssp TTCCTTTEEEECCCSS-HHHHHHHHHHHHCC-CCCEECBC----------------------------CB-CEETTTTEE
T ss_pred hCCCccccCCCCCcCC-HHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccc-ccCCCCCcc
Confidence 998865 566555 559999999999999999998888776654321 1122 255556 677777789
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS 227 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s 227 (398)
|.|.+++...... ||+|++....+| ..+| .+++.++|++.|.+|++|.+| +...|.-..+..+ ..++++|
T Consensus 191 Dyd~~~~~A~~~k-PklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtT 263 (490)
T 3ou5_A 191 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTT 263 (490)
T ss_dssp CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEE
T ss_pred cHHHHHHHHhhcC-CCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEecc
Confidence 9999999988654 799998754444 4567 889999999999999999999 4445554455544 3577899
Q ss_pred cccccCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHH
Q 015890 228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLV 293 (398)
Q Consensus 228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 293 (398)
.+|+| +|.|.|.|.++++.. ++.+++.... .....++....+++.+-++.+ ..+.+..+.+++.
T Consensus 264 THKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv 341 (490)
T 3ou5_A 264 THKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL 341 (490)
T ss_dssp SSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred ccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 99998 588999998875210 4556665443 333334444444444444433 3466789999999
Q ss_pred HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-C----CCCCeEEEEecC----
Q 015890 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-C----GCRGHLRISFGG---- 364 (398)
Q Consensus 294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~----~~~~~iRi~~~~---- 364 (398)
++++.|.+.|.+.|...+.+......+++++.....+..+... +|++.||.+.--.. + ..+..|||+...
T Consensus 342 ~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~-~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtR 420 (490)
T 3ou5_A 342 KNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAER-VLELVSITANKNTCPGDRSAITPGGLRLGAPALTSR 420 (490)
T ss_dssp HHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHH-HHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHT
T ss_pred HHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHH-HHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhC
Confidence 9999999999998885555566567788888654445555544 56799999853221 1 125689999432
Q ss_pred -CCHHHHHHHHHHHHHHHH
Q 015890 365 -LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 365 -~~~~~~~~~~~~l~~~~~ 382 (398)
..++|+.+..+.|.+++.
T Consensus 421 G~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 421 QFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp TCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 578899999999988775
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.85 E-value=1.9e-21 Score=196.17 Aligned_cols=340 Identities=11% Similarity=0.020 Sum_probs=214.1
Q ss_pred CeEEcCCc--cCCCC-C-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHH
Q 015890 31 NAVSLAQG--VVYWQ-P-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI 105 (398)
Q Consensus 31 ~~~~l~~g--~~~~~-~-~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~ 105 (398)
.|+|+..| .+.++ . +|++.+|+.+++.+.. .+.......+....+++.|.+..+.. .+.+++++||++|++.+
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~--h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~A 458 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFG--HVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIA 458 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHS--SCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcc--cccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHH
Confidence 68888876 34555 3 7999999999886521 11111112344456777776655533 46899999999999999
Q ss_pred HHHhc-----cC-----------C-CEEEEeCCCCcChhhHH-HhcCc---------------EE-------------EE
Q 015890 106 VLTLC-----DA-----------G-DSVVMFAPYYFNSYMSF-QMTGV---------------TH-------------IL 139 (398)
Q Consensus 106 ~~~l~-----~~-----------g-d~Vl~~~p~~~~~~~~~-~~~g~---------------~~-------------~~ 139 (398)
++... .. + .+|+....+|++....+ ...|. .+ ..
T Consensus 459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 538 (831)
T 4a0g_A 459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN 538 (831)
T ss_dssp HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence 98862 11 2 37999999998755333 22221 00 01
Q ss_pred eccCCCC------C--CCCC------------------hHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-CCHHH
Q 015890 140 VGPCSSK------T--LHPD------------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-IPERL 185 (398)
Q Consensus 140 ~~~~~~~------~--~~~d------------------~e~l~~~l~~------~~~~~~v~i~~p-~nptG~~-~~~~~ 185 (398)
+ +.+.. + ..-+ .+.|++.++. ...+++|+++.. ++..|.. +|+++
T Consensus 539 ~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~ 617 (831)
T 4a0g_A 539 I-SLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF 617 (831)
T ss_dssp E-ECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred e-cCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence 1 11100 0 0001 2567777752 233678888864 7888875 58889
Q ss_pred HHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh----
Q 015890 186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV---- 258 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~---- 258 (398)
+++|.++|++||+++|+||++ |+..|........+....+.+++|.++ +| +++|+++++ +++++.+...
T Consensus 618 L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~-gG~~Plgav~~~---~~i~~~~~~~~~~~ 693 (831)
T 4a0g_A 618 QRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLT-GGMVPLAVTLAT---DAVFDSFSGDSKLK 693 (831)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGG-TTSSCCEEEEEC---HHHHHTTCSSCGGG
T ss_pred HHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccc-cCccCcEEEEEC---HHHHHHHhcccccc
Confidence 999999999999999999999 666665443221111111337899997 57 799999999 7888776432
Q ss_pred --hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH----HHHHHHHhccCCCCccccCCccEEEEeeCCCCC--
Q 015890 259 --QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN----REIIREALSPLGEGAVKGGEGAIYLWARLPEKH-- 328 (398)
Q Consensus 259 --~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 328 (398)
....+++.++.+++++.+.|+.. ++..++..+...+. .+.+.+.+++.+.+..+.+. |.++.+.+....
T Consensus 694 ~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~ 772 (831)
T 4a0g_A 694 ALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKADASN 772 (831)
T ss_dssp SCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC-----
T ss_pred cceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccc
Confidence 23467788999999999888741 11111111111111 22344555556654445555 556666664221
Q ss_pred -----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 329 -----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 329 -----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
.....+...++ ++||+++|+ .+.||+++.. .+++++++++++|.++++++
T Consensus 773 ~~~~~~~a~~~~~~l~-e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 773 SGYASLYAKSLLIMLR-EDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ----CHHHHHHHHHHH-HTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cccchHHHHHHHHHHH-HCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 12345666665 899999985 4789999666 79999999999999988764
No 234
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.85 E-value=7.1e-20 Score=180.32 Aligned_cols=299 Identities=13% Similarity=0.079 Sum_probs=190.5
Q ss_pred CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC
Q 015890 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS 145 (398)
Q Consensus 66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 145 (398)
+..-..++++.+++++ |. ...+++++|++.|+..++.+++++||+|+++.++|.++...+...|++++++ +.+.
T Consensus 193 ~~g~i~eaE~~lA~~f----Ga-~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v-~~~~ 266 (715)
T 3n75_A 193 HSGPHKEAEQYIARVF----NA-DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYF-RPTR 266 (715)
T ss_dssp TBTHHHHHHHHHHHHH----TC-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEE-CCCB
T ss_pred CcHHHHHHHHHHHHHh----CC-CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-eccc
Confidence 4444567777777777 44 2346677887899999999999999999999999999999999999999998 5443
Q ss_pred CCCC----C-----ChHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC
Q 015890 146 KTLH----P-----DADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD 210 (398)
Q Consensus 146 ~~~~----~-----d~e~l~~~l~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~ 210 (398)
+.+. + |++.|++++++.+. ++++++++| |++|.+++ +++|.++|+++ .+++||+| +.+.
T Consensus 267 ~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~~f~ 340 (715)
T 3n75_A 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYTNFS 340 (715)
T ss_dssp CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTGGGS
T ss_pred cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEccccccccccC
Confidence 3333 3 89999999985432 348999999 99999999 88888888766 37999999 3333
Q ss_pred CCc--ccccc----CCcE-EEEcccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCC
Q 015890 211 GRK--HCCVE----GDHV-VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTG 281 (398)
Q Consensus 211 ~~~--~~~~~----~~~~-i~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~ 281 (398)
+.. ..... .+.+ +++.|+||+++ |+ ..|++.+++.. ..+.+..... ..+.+++.+..+++..+++..
T Consensus 341 ~~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~ 416 (715)
T 3n75_A 341 PIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--NEETFNEAYMMHTTTSPHYGIVASTETAAAMM 416 (715)
T ss_dssp GGGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred CccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Confidence 211 12221 2333 55899999985 44 35788777531 1222332222 224556666666666666432
Q ss_pred c-hHHHHHHHHHHHHHHHHHHHhccCCC------CccccCC------------------------c-----cEEEEeeCC
Q 015890 282 P-EWVTERVKDLVRNREIIREALSPLGE------GAVKGGE------------------------G-----AIYLWARLP 325 (398)
Q Consensus 282 ~-~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~~------------------------~-----~~~~~~~~~ 325 (398)
. ....+..++..++.+++++.|++++. +++..++ + ..-+.+..+
T Consensus 417 ~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~ 496 (715)
T 3n75_A 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP 496 (715)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECS
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcC
Confidence 2 12344555555666666655543321 1111110 0 111334443
Q ss_pred CC---------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890 326 EK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 385 (398)
Q Consensus 326 ~~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~ 385 (398)
.. ..++.++.+.| +++||.+.-. ...+|-+-++- .+++++++++++|.+.-+.+.
T Consensus 497 ~~~~~G~~~~~Gi~g~~~~~~L-~~~~I~~E~~----d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~~ 561 (715)
T 3n75_A 497 GMEKDGTMSDFGIPASIVAKYL-DEHGIVVEKT----GPYNLLFLFSIGIDKTKALSLLRALTDFKRAFD 561 (715)
T ss_dssp CBCTTSCBCSSCCCHHHHHHHH-HHTTCCCSEE----ETTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccccCCCcHHHHHHHH-HHCCCEEEec----CCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 21 23455666666 6889988553 24455444443 588889999988887766544
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.81 E-value=8.6e-18 Score=154.05 Aligned_cols=300 Identities=13% Similarity=0.046 Sum_probs=190.9
Q ss_pred HHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccC----CCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCCh
Q 015890 79 KKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA 152 (398)
Q Consensus 79 ~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~ 152 (398)
+|++.. |++. ...++++|+|.++.+++.+.+++ +|+||++..+|.+....+...|+++++++|. +++...+|+
T Consensus 124 d~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~ 202 (501)
T 3hl2_A 124 DIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDL 202 (501)
T ss_dssp HHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECH
T ss_pred HHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCH
Confidence 444444 7764 56999999998888888887763 4999999999999999999999999998442 233467899
Q ss_pred HHHHHhhccCC-CCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC-CCccccccCC-cEEEE
Q 015890 153 DWLEKTLETKP-TPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD-GRKHCCVEGD-HVVNL 225 (398)
Q Consensus 153 e~l~~~l~~~~-~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~-~~~~~~~~~~-~~i~~ 225 (398)
+.++++|++.+ ...++++. .+.|..+.+.+ |++|+++|++||++++||+|| +.+. ..+......+ .++++
T Consensus 203 e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vV 279 (501)
T 3hl2_A 203 KAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFV 279 (501)
T ss_dssp HHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEE
Confidence 99999998532 23444444 34454445567 999999999999999999999 3221 1111222223 55788
Q ss_pred cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 305 (398)
Q Consensus 226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (398)
.|.+|.+-++ +..+.+..++ +++++.+........ ..+++.......+..+.+.+++..++..++.+++++.|++
T Consensus 280 qS~HK~llvp-IGG~ii~~~d--~e~l~~~~~~yPGr~--S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~ 354 (501)
T 3hl2_A 280 QSLDKNFMVP-VGGAIIAGFN--DSFIQEISKMYPGRA--SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK 354 (501)
T ss_dssp EEHHHHHCCC-SSCEEEEESC--HHHHHHHHHTSCSCB--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccceee-cCceEEEeCC--HHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999998433 3334554565 677777654432212 2233333333344334566677777777777777777765
Q ss_pred ----CCCCcccc-CCccEEEEeeCCCCCC---C-hHHHHHHHHHhcCe---EE-ecCC----------CCCC------CC
Q 015890 306 ----LGEGAVKG-GEGAIYLWARLPEKHL---D-DFEVVRWLAHRHGV---VV-IPGG----------ACGC------RG 356 (398)
Q Consensus 306 ----~~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~ll~~~gi---~v-~~g~----------~~~~------~~ 356 (398)
.+. ++.. +.+..-+.+.+..... . ...+-..|- .++| .| .++. .|+. ..
T Consensus 355 la~~~ge-~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf-~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~ 432 (501)
T 3hl2_A 355 LSEAYNE-RLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF-TRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA 432 (501)
T ss_dssp HHHTTTC-CBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH-HTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSC
T ss_pred HHHhcCh-hhcCCCCCceeEEEecccccccccccHHHHHHHHH-hcCCCcceeecCCCceEECCeeecCcccCCCCCCch
Confidence 343 4433 3344555556543211 1 223333343 4443 33 3333 2322 35
Q ss_pred eEEEEecC-CCHHHHHHHHHHHHHHHHHHhcccc
Q 015890 357 HLRISFGG-LVEDDCKAAADRLRRGLEELVKDGM 389 (398)
Q Consensus 357 ~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 389 (398)
++-++.+- .+.+|++.++++|.+++.++.++..
T Consensus 433 yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~ 466 (501)
T 3hl2_A 433 YLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERS 466 (501)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 77776555 7999999999999999999876433
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.76 E-value=1.9e-16 Score=147.21 Aligned_cols=310 Identities=14% Similarity=0.041 Sum_probs=190.9
Q ss_pred CCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccC----CCEEEEeCCCCcChhhHHHhcCcEEEEecc
Q 015890 68 EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142 (398)
Q Consensus 68 ~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 142 (398)
++...+.+.+..++.+..|++.. ..++++|+|.++.+++.+.+++ ++.|+++..+|.+...++...|+.++.+.+
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 33556777888888887788643 4688899985555555555443 789999999999999999999999888833
Q ss_pred CC-CCCCCCChHHHHHhhccCC-CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeecee---ccCC-Cccc
Q 015890 143 CS-SKTLHPDADWLEKTLETKP-TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF---MYDG-RKHC 215 (398)
Q Consensus 143 ~~-~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~---~~~~-~~~~ 215 (398)
.. ++.+.+|++.|+++|++.+ ...++++.+| ++.+|.+-+ +++|+++|++||++++||++|. .+.. .+..
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~ 250 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ 250 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHH
Confidence 21 2346789999999997532 1245555544 455667888 9999999999999999999992 2211 1111
Q ss_pred ccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890 216 CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294 (398)
Q Consensus 216 ~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 294 (398)
... ...+.++.|.+|++. .....+++..++ ++.++.+.........+ +++.......+..+.+.+.+..++..+
T Consensus 251 a~~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd--~~~~~~~~~~~~g~~s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~ 325 (450)
T 3bc8_A 251 GARVGRIDAFVQSLDKNFM-VPVGGAIIAGFN--EPFIQDISKMYPGRASA--SPSLDVLITLLSLGCSGYRKLLKERKE 325 (450)
T ss_dssp HHHHSCCCEEEEEHHHHHS-CCSSCEEEEESC--HHHHHHHHHHSCSCBCS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCCCEEEECCccCCC-chhccEEEEecC--HHHHHHHHHHhhcCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 134567889999996 444556666665 67766665433211222 333333333333344556666666666
Q ss_pred HHHHHHHHhccCC---CCccccCC-ccEEEEeeCCC---C-CCChHHHHHHHHHhcC---eEEec---------------
Q 015890 295 NREIIREALSPLG---EGAVKGGE-GAIYLWARLPE---K-HLDDFEVVRWLAHRHG---VVVIP--------------- 348 (398)
Q Consensus 295 ~~~~l~~~l~~~~---~~~~~~~~-~~~~~~~~~~~---~-~~~~~~~~~~ll~~~g---i~v~~--------------- 348 (398)
+.+++++.+++++ +.++...+ .+.-..+.++. . ..+...+.-.+ ...| ..+.+
T Consensus 326 ~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~~~~l~~~ 404 (450)
T 3bc8_A 326 MFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSGHTFRGF 404 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETTEEEETT
T ss_pred HHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchhHHHHHHc
Confidence 6777777766544 43554422 11112222221 1 11333444434 2344 33321
Q ss_pred CCC--CCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890 349 GGA--CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 349 g~~--~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
+.. +....+|=+.++. .+++++++++++|.+.++++.+
T Consensus 405 gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 405 MSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp TTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 111 1234566665555 7999999999999999877654
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=77.12 E-value=17 Score=27.55 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=64.6
Q ss_pred CCCCcEEEecCh--HHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890 87 LYKSSVMVTAGA--NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (398)
Q Consensus 87 ~~~~~v~~~~g~--t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~ 164 (398)
++...++++-+. ...+.-+...+..-|=+|+.+..+ ...++..|+.+..+....+.+-..+..++.+.++++.
T Consensus 22 lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~- 96 (143)
T 2yvq_A 22 IPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS- 96 (143)
T ss_dssp CCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS-
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC-
Confidence 333346666454 455555666777778788777644 3566778988777722222111001135777787765
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
+.+|+-. | .+...+..+-..|...|-++|++++..
T Consensus 97 i~lVInt-~---~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 97 IDLVINL-P---NNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CCEEEEC-C---CCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ceEEEEC-C---CCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 6666643 3 232233566788999999999998754
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=72.64 E-value=16 Score=31.26 Aligned_cols=99 Identities=11% Similarity=0.026 Sum_probs=57.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
.+.+++|.+++..=..+...|.+.|-+|++..-.-......++..|.+...+ ..|-. |.+++++.++ ...+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGI-QADSA----NLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEE-ECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEE-EecCC----CHHHHHHHHHHHHHHcCC
Confidence 4556666555444455666677889888876544444555566667666666 55422 5566665554 2232
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
+..++-+...++.+- -++.++++++.++
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 555554433333333 2577778877764
No 239
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=71.31 E-value=23 Score=33.47 Aligned_cols=111 Identities=15% Similarity=0.107 Sum_probs=66.8
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcc---C---------C-C-----EEEEeCCCCc-------------C------hhhH
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCD---A---------G-D-----SVVMFAPYYF-------------N------SYMS 129 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~---~---------g-d-----~Vl~~~p~~~-------------~------~~~~ 129 (398)
++++.|.++.++..+++..+++|.+ . | . ..+...|-|. + +...
T Consensus 128 v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~ 207 (525)
T 3gh5_A 128 TTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDL 207 (525)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHHHH
Confidence 3566788888888888877777641 1 1 1 1244455541 1 2234
Q ss_pred HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
+..+++++..++..|+.+|.+..+..-++-..+. . .......|..++.+++++|.+.|+++|+-||-.
T Consensus 208 mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga--~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIPE 275 (525)
T 3gh5_A 208 ASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGS--K----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPE 275 (525)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTT--S----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHcCCcEEEEEeccCCccccccccchhhhhccC--c----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEEE
Confidence 4556677776645666677665544333322111 0 001122356789999999999999999998854
No 240
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=69.49 E-value=23 Score=28.70 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=39.8
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..++..|.+++.+ |.....+.+.+.+.... +++|.++.-..+ +.+.++++++.+++.+
T Consensus 110 ~~l~~~G~~v~~L------G~~vp~~~l~~~~~~~~-~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 110 MMLESGGFTVYNL------GVDIEPGKFVEAVKKYQ-PDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHHTTCEEEEC------CSSBCHHHHHHHHHHHC-CSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 4668889999877 22457888888876443 688888743222 2445888888887754
No 241
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=69.48 E-value=46 Score=27.99 Aligned_cols=102 Identities=13% Similarity=-0.008 Sum_probs=58.1
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-- 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-- 160 (398)
.++.+.+++|.+++..=..+...|.+.|-+|++..-.-.... ..++..|.++..+ ..|-. |.+++++.++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~-~~Dv~----~~~~v~~~~~~~ 80 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGV-AFDVT----DELAIEAAFSKL 80 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC-CCCTT----CHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EeeCC----CHHHHHHHHHHH
Confidence 455556666666654445566667789988888654332222 2335557777777 55432 5566655554
Q ss_pred --cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 161 --TKPTPKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 161 --~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
...++..++-+...++.+. -++.++++++.++
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3333566654433333333 2577777777664
No 242
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=65.79 E-value=13 Score=34.71 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-+.++++++++.|+++|+.||+|-|+
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46788999999999999999999998
No 243
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=65.37 E-value=27 Score=32.93 Aligned_cols=106 Identities=7% Similarity=0.064 Sum_probs=61.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcc----C--CC-----EEEEeCCCCc-------------C------hhhHHHhcCcEE
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCD----A--GD-----SVVMFAPYYF-------------N------SYMSFQMTGVTH 137 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~----~--gd-----~Vl~~~p~~~-------------~------~~~~~~~~g~~~ 137 (398)
+++.|.++.++..+++..+++|.+ . |. ..+...|-|. + +...+..+++++
T Consensus 99 ~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN~ 178 (507)
T 2gjx_A 99 NDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNV 178 (507)
T ss_dssp SSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCE
T ss_pred eCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCce
Confidence 456788888888888877777642 1 21 1233344441 1 123345556666
Q ss_pred EEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 138 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..++..|+.+|.+..+.+-+.-+.+ ...|.+..++.+++++|.+.|+++|+-||-.
T Consensus 179 lh~HltDdq~wr~ei~~~P~Lt~~G----------a~~~~~~~YT~~di~eiv~yA~~rgI~VIPE 234 (507)
T 2gjx_A 179 FHWHLVDDPSFPYESFTFPELMRKG----------SYNPVTHIYTAQDVKEVIEYARLRGIRVLAE 234 (507)
T ss_dssp EEEECCCSSCCCBCCSSCTHHHHHH----------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEecccCeeeeccccchhhhcc----------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEEC
Confidence 6653455556654432222211100 0123456789999999999999999998854
No 244
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=65.07 E-value=22 Score=30.41 Aligned_cols=79 Identities=9% Similarity=-0.004 Sum_probs=46.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~ 167 (398)
....+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++.-..+.+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~----d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVR-ELDLQ----DLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEE-ECCTT----CHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEE-EcCCC----CHHHHHHHHHhcCCCCE
Confidence 34557777665544455666677888888876544333444445556566666 55422 67778877765433566
Q ss_pred EEEe
Q 015890 168 VSVV 171 (398)
Q Consensus 168 v~i~ 171 (398)
++-+
T Consensus 90 lv~n 93 (291)
T 3rd5_A 90 LINN 93 (291)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5544
No 245
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=64.96 E-value=42 Score=27.81 Aligned_cols=98 Identities=12% Similarity=0.044 Sum_probs=54.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|-+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI-AADIS----DPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEC-CCCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHHHHHHHCCC
Confidence 3456666655444455666677889888887654444444445556666666 54422 5566666554 1122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+.+++-+....+.+. -.+.++++++.+
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 576665544333332 346666666655
No 246
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.94 E-value=36 Score=26.27 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=39.7
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..++..|.+++.. |...+++++.+.+.+.. +.+|.++.-.. ...+.+.++++.+++.+
T Consensus 40 ~~l~~~G~eVi~l------G~~~p~e~lv~aa~~~~-~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 40 RALRDAGFEVVYT------GLRQTPEQVAMAAVQED-VDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHTTCEEECC------CSBCCHHHHHHHHHHTT-CSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHhcC-CCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 4568889999876 22357888888777554 68888874332 23456888888887753
No 247
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=62.04 E-value=45 Score=27.92 Aligned_cols=101 Identities=14% Similarity=-0.004 Sum_probs=56.3
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC-cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~ 164 (398)
.++.+.+++|.+++..=..+...|.+.|-+|++..-.- ......++..|.+...+ ..|-. |.+.+++.++...
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~-~~Dv~----d~~~v~~~~~~g~- 79 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASAL-LIDFA----DPLAAKDSFTDAG- 79 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEE-ECCTT----STTTTTTSSTTTC-
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEE-EccCC----CHHHHHHHHHhCC-
Confidence 44455566665554444555566778898887654322 22344556777777766 55432 4445555555543
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
+..++-+..-++.+. -++.++++++.++
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 565553332233222 3577788887764
No 248
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=61.23 E-value=51 Score=27.93 Aligned_cols=100 Identities=18% Similarity=0.082 Sum_probs=54.5
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cC
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TK 162 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~ 162 (398)
.....+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ..
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGV-RVDVS----SAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EecCC----CHHHHHHHHHHHHHHc
Confidence 334556666655444455666777889888876544333344444456555555 44422 5566666554 11
Q ss_pred CCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 163 PTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
..+.+++-+......+. -.+.++++++.+
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 22566665544333332 356666666654
No 249
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=60.68 E-value=28 Score=30.22 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=44.8
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEE
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLV 201 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li 201 (398)
+.....|+-+-.+-|.+++ ..+|.+.+++.++ +.. +..+++. .++--+..++.++..++++.+.+. ++++|
T Consensus 8 ~~~~~~Gv~~a~vTPF~~d-g~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 84 (303)
T 2wkj_A 8 HATNLRGVMAALLTPFDQQ-QALDKASLRRLVQFNIQQG-IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLI 84 (303)
T ss_dssp GGGGGCSEEEECCCCBCTT-SSBCHHHHHHHHHHHHHTT-CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred cCCCCCceEEeeEcCCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3334455443333355554 4789999988876 332 5777765 333344568999999999887653 46666
Q ss_pred E
Q 015890 202 V 202 (398)
Q Consensus 202 v 202 (398)
+
T Consensus 85 a 85 (303)
T 2wkj_A 85 A 85 (303)
T ss_dssp E
T ss_pred E
Confidence 4
No 250
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=59.82 E-value=35 Score=32.17 Aligned_cols=106 Identities=4% Similarity=0.029 Sum_probs=61.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcc----CC-CE------EEEeCCCCc-------------C------hhhHHHhcCcE
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCD----AG-DS------VVMFAPYYF-------------N------SYMSFQMTGVT 136 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~----~g-d~------Vl~~~p~~~-------------~------~~~~~~~~g~~ 136 (398)
++++.|.++.++..+++..+++|.+ .+ .. .+...|.|. + +...+..++++
T Consensus 104 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~KlN 183 (507)
T 1now_A 104 VKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFN 183 (507)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred EcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 3456788888888888877777642 11 11 233344441 1 11334455666
Q ss_pred EEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 137 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
+..++..|+.+|.+..+..-++-+.+. ..| |..++.+++++|.+.|+++|+-||-.
T Consensus 184 ~lh~HltDdq~wr~e~~~~P~Lt~~Ga----------~~~-~~~YT~~di~eiv~yA~~rgI~VIPE 239 (507)
T 1now_A 184 VLHWHIVDDQSFPYQSITFPELSNKGS----------YSL-SHVYTPNDVRMVIEYARLRGIRVLPE 239 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCHHHHHHHS----------SST-TSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeeccCccceeeccchhhhhcccC----------cCC-CCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 665534555555544332222211110 012 56789999999999999999999853
No 251
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=59.70 E-value=48 Score=24.15 Aligned_cols=101 Identities=9% Similarity=0.038 Sum_probs=61.8
Q ss_pred cEEEecChHHHHHHHHHHh---cc--CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 91 SVMVTAGANQAFVNIVLTL---CD--AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l---~~--~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
++++...+...+..++..+ .+ .+.-|+...|.+..+...+...|+ +++.+.+.+.. -.+...|+.++.+
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~---d~lwa~EqaLrsg 82 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNA---AALALSCEALRLG 82 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHH---HHHHHHHHHHHHT
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcH---HHHHHHHHHHhcC
Confidence 3455444444444444443 33 456777778888888888999996 56666222211 1356788888877
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
. +.+|+. ... -.+....+++--.|++-+...+
T Consensus 83 ~-~~aVl~-wl~-----~l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 83 R-SHTVVS-WLE-----PLSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp C-EEEEEE-CCS-----SCCHHHHHHHHHHHHHHTCEEE
T ss_pred C-ccEEEE-CCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 6 445544 332 2567778888888877665543
No 252
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=59.47 E-value=57 Score=27.55 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=51.3
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHh---h
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKT---L 159 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~---l 159 (398)
......+++|.++...=..+...|.+.|.+|++.... ..... .+...+.++..+ ..|-. |.+.+++. +
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~ 101 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAV-VADLA----DLEGAANVAEEL 101 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEE-ECCTT----CHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEE-EecCC----CHHHHHHHHHHH
Confidence 3445567777666544455666677889888776532 22222 223445566666 54432 44444443 3
Q ss_pred ccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 160 ETKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 160 ~~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.....+.+++-+......+. -.+.+++++..+
T Consensus 102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 22223566665533222222 246666666554
No 253
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=58.83 E-value=61 Score=26.91 Aligned_cols=98 Identities=9% Similarity=-0.045 Sum_probs=45.5
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFR-NADVT----NEADATAALAFAKQEFGH 81 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEE-ECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEE-EccCC----CHHHHHHHHHHHHHHcCC
Confidence 4456666655444455666677888888776544444444444445455555 44322 5566665554 2122
Q ss_pred CeEEEEeCCCCCCcc------CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT------YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~------~~~~~~l~~i~~ 191 (398)
+..++-+....+.+. -.+.+++++..+
T Consensus 82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 566665533322222 245566665554
No 254
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=58.48 E-value=69 Score=26.63 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=52.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAV-QMDVT----RQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHHHHHHHSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEE-EeeCC----CHHHHHHHHHHHHHHcCC
Confidence 4456777665444455666777889888876544333444444445445555 44322 5566655554 2223
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+..++-+....+.+. -.+.+++++..+
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 576665543333222 246666665554
No 255
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=57.34 E-value=41 Score=27.75 Aligned_cols=79 Identities=8% Similarity=0.014 Sum_probs=44.1
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
...+++|.++...=..+...|.+.|.+|++..-.........+..+.++..+ ..|-. |.+.+++.++....+.++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE-VCNLA----NKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCTT----SHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEE-EcCCC----CHHHHHHHHHhcCCCCEE
Confidence 4556666655444445556677888888876544333333334433334333 33322 567777777754436666
Q ss_pred EEeC
Q 015890 169 SVVN 172 (398)
Q Consensus 169 ~i~~ 172 (398)
+-+.
T Consensus 89 i~~A 92 (249)
T 3f9i_A 89 VCNA 92 (249)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 256
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=57.12 E-value=89 Score=26.46 Aligned_cols=165 Identities=14% Similarity=0.059 Sum_probs=82.6
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEec-Ch-
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-GA- 98 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~-g~- 98 (398)
+..+.+.|-+++.++.... |...-|.+.++..+++.++. . ....-+.+.+. ++. ..+..-++++- +.
T Consensus 38 ~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~-----~---~~~~~~~v~~i-r~~-~~~~Pivlm~Y~npv 107 (267)
T 3vnd_A 38 IQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGT-----T---SSDCFDIITKV-RAQ-HPDMPIGLLLYANLV 107 (267)
T ss_dssp HHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC-----C---HHHHHHHHHHH-HHH-CTTCCEEEEECHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC-----C---HHHHHHHHHHH-Hhc-CCCCCEEEEecCcHH
Confidence 4444557888888886542 33345666666667765531 1 12233333332 221 12222345443 11
Q ss_pred -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
+-++...+..+.+.| |.|++++-.+. .+...++..|++.+.+ -.+.. +.+.++...+... ..|++.+-
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~l-iaP~t----~~eri~~i~~~~~--gfvY~vS~ 180 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFI-APPNA----DADTLKMVSEQGE--GYTYLLSR 180 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECE-ECTTC----CHHHHHHHHHHCC--SCEEESCC
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEE-ECCCC----CHHHHHHHHHhCC--CcEEEEec
Confidence 112344455554455 78888765543 3556778889887755 22211 4567777766543 45666544
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHc-CCEEEEe
Q 015890 174 GNPSGTYI-PERLLKRISDLCKAA-GSWLVVD 203 (398)
Q Consensus 174 ~nptG~~~-~~~~l~~i~~l~~~~-~~~livD 203 (398)
..-||.-. ..+.+.++++.++++ +++++++
T Consensus 181 ~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vG 212 (267)
T 3vnd_A 181 AGVTGTESKAGEPIENILTQLAEFNAPPPLLG 212 (267)
T ss_dssp CCCC--------CHHHHHHHHHTTTCCCEEEC
T ss_pred CCCCCCccCCcHHHHHHHHHHHHhcCCCEEEE
Confidence 45577642 122355555555543 4555554
No 257
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=56.40 E-value=26 Score=20.61 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=25.8
Q ss_pred eEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 357 HLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
.+|||+...+..+.+++...|-+++.++.-
T Consensus 3 rvrisitartkkeaekfaailikvfaelgy 32 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAELGY 32 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHhCc
Confidence 589999887888999999999999988754
No 258
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=56.15 E-value=70 Score=27.82 Aligned_cols=75 Identities=11% Similarity=0.095 Sum_probs=44.4
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++..+++..+.| .-.++.+|++.+.+ .....+..+++.+|.+.++ ... +++|+.....+ ....+.
T Consensus 189 ~~~~~v~~H~af---~Yfa~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~If~e~~~~-------~~~~~~ 256 (312)
T 2o1e_A 189 EKKEFITQHTAF---GYLAKEYGLKQVPI-AGLSPDQEPSAASLAKLKTYAKEHN-VKVIYFEEIAS-------SKVADT 256 (312)
T ss_dssp SCCEEEESSCTT---HHHHHHTTCEEEEC-SSCCSSSCCCHHHHHHHHHHTTSSC-CCEEECSSCCC-------HHHHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCeEEEe-eccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCC-------hHHHHH
Confidence 456777766554 44468999998876 3333344567777666654 443 67777653222 222444
Q ss_pred HHHHHHHcCCEEE
Q 015890 189 ISDLCKAAGSWLV 201 (398)
Q Consensus 189 i~~l~~~~~~~li 201 (398)
| +++.|+.++
T Consensus 257 i---a~e~g~~v~ 266 (312)
T 2o1e_A 257 L---ASEIGAKTE 266 (312)
T ss_dssp H---HHHTCCEEE
T ss_pred H---HHHhCCcEE
Confidence 4 567787754
No 259
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=55.30 E-value=70 Score=24.72 Aligned_cols=101 Identities=9% Similarity=0.038 Sum_probs=61.9
Q ss_pred cEEEecChHHHHHHHHHHh---cc--CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 91 SVMVTAGANQAFVNIVLTL---CD--AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l---~~--~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
+++....+...+..+...+ .. .+..|+...|.+..+...+...|+ +++.+.+.+.. -.+...|+.++.+
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~---daLwa~EqALrsG 124 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNA---AALALSCEALRLG 124 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTT---HHHHHHHHHHHTT
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChH---HHHHHHHHHHhcC
Confidence 5666544434444444333 22 455677777778888888999996 56666222221 1367788889877
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
. +.+|+ .... -.+.+..+++--.|++-+...+
T Consensus 125 ~-~~aVl-~Wl~-----~l~~~~~RRLqlAAe~g~~~~f 156 (161)
T 1oft_A 125 R-SHTVV-SWLE-----PLSRAARKQLSRAAQLGQAQSL 156 (161)
T ss_dssp C-EEEEE-ECCS-----SCCHHHHHHHHHHHHHTTCEEE
T ss_pred C-ccEEE-ECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 6 44554 4332 2567778888877777665543
No 260
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=55.04 E-value=65 Score=27.61 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=42.6
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++..+++..+.| .-.++.+|++.+.+ .....+..+++.+|.+.++ .+. +++|+.....++ ...+.
T Consensus 178 ~~~~~v~~H~af---~Yf~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~~~~~-------~~~~~ 245 (286)
T 3gi1_A 178 RSKTFVTQHTAF---SYLAKRFGLKQLGI-SGISPEQEPSPRQLKEIQDFVKEYN-VKTIFAEDNVNP-------KIAHA 245 (286)
T ss_dssp SCCEEEEEESCC---HHHHHHTTCEEEEE-ECSCC---CCHHHHHHHHHHHHHTT-CCEEEECTTSCT-------HHHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCeEeec-cccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCCh-------HHHHH
Confidence 456777776654 33468999998876 3322233566666655544 444 678877633222 12333
Q ss_pred HHHHHHHcCCEEE
Q 015890 189 ISDLCKAAGSWLV 201 (398)
Q Consensus 189 i~~l~~~~~~~li 201 (398)
++++.|+.++
T Consensus 246 ---la~~~g~~v~ 255 (286)
T 3gi1_A 246 ---IAKSTGAKVK 255 (286)
T ss_dssp ---HHHTTTCEEE
T ss_pred ---HHHHhCCeEE
Confidence 4567787765
No 261
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=54.92 E-value=21 Score=33.74 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=64.6
Q ss_pred CCCcEEEecChHHHHHHHHHHhcc---C---------CC-----EEEEeCCCCc-------------C------hhhHHH
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCD---A---------GD-----SVVMFAPYYF-------------N------SYMSFQ 131 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~---~---------gd-----~Vl~~~p~~~-------------~------~~~~~~ 131 (398)
+.+.|.++.++..+++..+++|.+ . +. -.+...|.|. + +...+.
T Consensus 105 ~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~ma 184 (512)
T 1jak_A 105 GPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDRVA 184 (512)
T ss_dssp ETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHHHH
Confidence 356788888887887777776531 1 11 1234445441 1 123345
Q ss_pred hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 132 MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 132 ~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
.+++++..++..|+.+|.+..+..-++-+.+. -. ......|..++.+++++|.+.|+++|+-||-.
T Consensus 185 ~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga-~~-----~~~~~~~g~YT~~di~eiv~yA~~rgI~VIPE 250 (512)
T 1jak_A 185 RYKYNKLHLHLSDDQGWRIAIDSWPRLATYGG-ST-----EVGGGPGGYYTKAEYKEIVRYAASRHLEVVPE 250 (512)
T ss_dssp TTTCCEEEEECBCSSCBCBCCTTSTHHHHTTT-SC-----CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HcCCcEEEEEeccCCCceehhhhhHHHHhhcC-cc-----ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 56677666645666667665444333322111 00 01122367899999999999999999999853
No 262
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=54.56 E-value=20 Score=30.78 Aligned_cols=69 Identities=13% Similarity=0.006 Sum_probs=42.5
Q ss_pred ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 125 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.+.-.++.+|++.+.+ ..-..+..+++.+|.+.++ .+. +++|+..... ++.-.+.|.+++++.|+.++
T Consensus 172 af~Y~~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~~~-------~~~~~~~l~~~a~~~g~~v~ 242 (282)
T 3mfq_A 172 AFNYFAASYDFTLYAP-QGVSTDSEVANSDMIETVNLIIDHN-IKAIFTESTT-------NPERMKKLQEAVKAKGGQVE 242 (282)
T ss_dssp CCHHHHHHTTCEEECS-SCSSSCSCCCHHHHHHHHHHHHHHT-CCEEECBTTS-------CTHHHHHHHHHHHTTSCCCE
T ss_pred hHHHHHHHCCCeEecc-cccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCC-------ChHHHHHHHHHHHhcCCceE
Confidence 3444568999998765 2212233566666666554 443 6888766322 23447888888998887654
Q ss_pred E
Q 015890 202 V 202 (398)
Q Consensus 202 v 202 (398)
+
T Consensus 243 ~ 243 (282)
T 3mfq_A 243 V 243 (282)
T ss_dssp E
T ss_pred E
Confidence 3
No 263
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=54.26 E-value=21 Score=31.00 Aligned_cols=70 Identities=7% Similarity=-0.001 Sum_probs=42.4
Q ss_pred HHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
....|+-+-.+-|.+++ ..+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+++|+
T Consensus 11 ~~~~Gv~~a~vTPf~~d-g~iD~~~l~~lv~~li~~G-v~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 11 IDFGTIATAMVTPFDIN-GNIDFAKTTKLVNYLIDNG-TTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp CCCCSEEEECCCCBCTT-SSBCHHHHHHHHHHHHHTT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCceEEeeECcCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 33445433333345544 4789999888876 332 5777765 333344568888888888887643 355553
No 264
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=53.86 E-value=63 Score=26.87 Aligned_cols=98 Identities=13% Similarity=0.022 Sum_probs=52.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL-RSDIA----DLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTT----CHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEE-EccCC----CHHHHHHHHHHHHHHhCC
Confidence 4556777666544455666777888888876544333444444445555555 44422 5555555543 2122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+..++-+....+.+. -.+.+++++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 565554433322222 236666666655
No 265
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=53.59 E-value=1e+02 Score=26.04 Aligned_cols=98 Identities=8% Similarity=-0.083 Sum_probs=54.3
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCC--cChh-----hH--------HHhc-CcEEEEeccCCCCCCCCChHH
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSY-----MS--------FQMT-GVTHILVGPCSSKTLHPDADW 154 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~--~~~~-----~~--------~~~~-g~~~~~~~~~~~~~~~~d~e~ 154 (398)
+..+++.....+...+.......-+|++..+.- |..- .. ++.. |.+++.+ |-...+++
T Consensus 98 qeh~s~~~~~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~L------G~~vp~e~ 171 (262)
T 1xrs_B 98 AVNSEILSMEETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNL------GSQVANED 171 (262)
T ss_dssp ----CCCCHHHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEEC------CSSBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEEC------CCCCCHHH
Confidence 333555555555555554443334666544332 2211 12 5677 8898877 33457888
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
+.+...+.. +.+|.++.-..+ + -...+.+.++++.+++.|
T Consensus 172 iv~aa~e~~-~d~VglS~l~t~-~-~~~~~~~~~~i~~L~~~g 211 (262)
T 1xrs_B 172 FIKKAVELE-ADVLLVSQTVTQ-K-NVHIQNMTHLIELLEAEG 211 (262)
T ss_dssp HHHHHHHTT-CSEEEEECCCCT-T-SHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC-CCEEEEEeecCC-c-cchHHHHHHHHHHHHhcC
Confidence 877777544 688888743322 1 113456888888887765
No 266
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=52.69 E-value=77 Score=26.04 Aligned_cols=42 Identities=19% Similarity=0.106 Sum_probs=18.4
Q ss_pred ChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEe
Q 015890 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140 (398)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 140 (398)
+-.+++..+-..+-..|..|++...+-..+.. +..+..++.+
T Consensus 47 ~le~av~~a~~~~~~~~~dVIISRGgta~~Lr--~~~~iPVV~I 88 (225)
T 2pju_A 47 GFEKAVTYIRKKLANERCDAIIAAGSNGAYLK--SRLSVPVILI 88 (225)
T ss_dssp CHHHHHHHHHHHTTTSCCSEEEEEHHHHHHHH--TTCSSCEEEE
T ss_pred cHHHHHHHHHHHHhcCCCeEEEeCChHHHHHH--hhCCCCEEEe
Confidence 34445555444333233445555533222222 2345566665
No 267
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=52.05 E-value=91 Score=28.69 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=21.1
Q ss_pred CeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890 356 GHLRISFGG-LVEDDCKAAADRLRRGLEEL 384 (398)
Q Consensus 356 ~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~ 384 (398)
..-||+-++ .+..|+.++++.+.+.-+-+
T Consensus 397 r~~ria~gsg~~~~~v~~ll~~~~~~~~~~ 426 (443)
T 3dm5_A 397 RIKRIARGSGTSTKDVKELLDQYRQMKKLF 426 (443)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Confidence 456777766 78899999988887654433
No 268
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=51.74 E-value=58 Score=27.37 Aligned_cols=99 Identities=9% Similarity=-0.023 Sum_probs=50.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~ 163 (398)
....+++|.++...=..+...|.+.|.+|++..-.-.......+..|.++..+ ..|-. |.+.+++.++ ...
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVF-SANLS----DRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCTT----SHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EeecC----CHHHHHHHHHHHHHHcC
Confidence 34556666655444455666677888888776544333444455556666665 44422 5566665554 112
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+.+++-+......+. -.+.+++++..+
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2566665533322222 234445554443
No 269
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=51.54 E-value=83 Score=26.05 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=52.1
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV-AADIS----KEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----SHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEE-EecCC----CHHHHHHHHHHHHHhcCC
Confidence 4456666665444455666677888888876544434444445556555555 44422 4555555554 1122
Q ss_pred CeEEEEeCCCC-CCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGN-PSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~n-ptG~--~~~~~~l~~i~~ 191 (398)
+..++-+.... +.+. ..+.+++++..+
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 56666553322 1222 246666666554
No 270
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=50.77 E-value=47 Score=27.23 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|+++..+ ..+...|.++++..|.-.. -...+...|.....+ +.. +.+++.+.+..+ ..+|.|.-.++
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~-~v~------~~~di~~~i~~~--~dvV~IDEaQF 112 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI-NIS------KASEIMTHDLTN--VDVIGIDEVQF 112 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------CBTTBCCEEE-EES------SGGGGGGSCCTT--CSEEEECCGGG
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHHhcCCceeeE-EeC------CHHHHHHHHhcC--CCEEEEechhc
Confidence 3455554 4445567788888776532 223444556533333 222 223333334332 57888885544
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeec
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNT 205 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~ 205 (398)
++++.++.+.+++ +.|+.+|+=.-
T Consensus 113 -----f~~~~v~~l~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 113 -----FDDEIVSIVEKLS-ADGHRVIVAGL 136 (219)
T ss_dssp -----SCTHHHHHHHHHH-HTTCEEEEEEE
T ss_pred -----CCHHHHHHHHHHH-HCCCEEEEeec
Confidence 6677788888888 57999986543
No 271
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=50.49 E-value=59 Score=27.56 Aligned_cols=98 Identities=9% Similarity=-0.045 Sum_probs=51.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAAC-RVDVS----DEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEE-ECCTT----CHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEE-EecCC----CHHHHHHHHHHHHHHcCC
Confidence 3446666555443345556677888888876544333444444445555545 44322 5556555554 2122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+.+++-+....+.+. -.+.++++++.+
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 566665543333232 246666666654
No 272
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=50.02 E-value=18 Score=33.34 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.+|+|-+.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6789999999999999999999887
No 273
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=49.53 E-value=82 Score=26.00 Aligned_cols=99 Identities=12% Similarity=0.004 Sum_probs=50.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~ 163 (398)
....+++|.++...=..+...|.+.|.+|++..-.-.......+..+.+...+ ..|-. |.+.+++.++ ...
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM-ALNVT----NPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEE-ECCTT----CHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEE-EEeCC----CHHHHHHHHHHHHHHcC
Confidence 34556666655444445566677889888876544333333333334334444 44322 5566666554 112
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+.+++-+....+.+. -.+.+++++..+
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2566665533332222 246666666554
No 274
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=49.40 E-value=1.1e+02 Score=25.37 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=49.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~ 163 (398)
....+++|.++...=..+...|.+.|.+|++..-.-......++..+...+.. ++ . |.+.+++.++ ...
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-Dv--~----~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-DF--S----CETGIMAFIDLLKTQTS 98 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-CT--T----SHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-CC--C----CHHHHHHHHHHHHHhcC
Confidence 34567777665544455666677788777766544333344445556555443 22 1 4555555554 222
Q ss_pred CCeEEEEeCCCCCCc-cCCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSG-TYIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG-~~~~~~~l~~i~~ 191 (398)
.+.+++-+......+ ...+.+++++..+
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 356666553322221 2234444444443
No 275
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.32 E-value=1.1e+02 Score=25.34 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=52.8
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
-+.+++|.+++..=..+...|.+.|-+|++..-.-.... ...+.++..+ ..|-. |.+.+++.++.-.++..+
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---APRHPRIRRE-ELDIT----DSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---SCCCTTEEEE-ECCTT----CHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---hhhcCCeEEE-EecCC----CHHHHHHHHHhcCCCCEE
Confidence 345666665544445556667788988887654332221 2233345544 44322 677888888755545655
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHH
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDL 192 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l 192 (398)
+-+..-+....-++.++++++.++
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHH
Confidence 533322223334566777776654
No 276
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=48.78 E-value=75 Score=26.78 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=51.2
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCc------------C---hhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF------------N---SYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~------------~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
...+++|.++...=..+...|.+.|.+|++..-... . ....++..|.++..+ ..|-. |.+
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~ 84 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA-EVDVR----DRA 84 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE-ECCTT----CHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE-EccCC----CHH
Confidence 345666666544445566667788888877543210 0 111233446666666 55422 556
Q ss_pred HHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 154 WLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 154 ~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
.+++.++ ....+.+++-+....+.+...+.+++++..+
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 6655554 2122566665544333333356666666654
No 277
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=48.56 E-value=90 Score=26.21 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=50.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAI-SLDVT----DGERIDVVAADVLARYGRV 80 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEE-ECCTT----CHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEE-EeeCC----CHHHHHHHHHHHHHhCCCC
Confidence 345666555444445566677888888876655444555555555455544 44322 5556655554 11225
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++-+....+.+. -.+.++++++.+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 66665533322222 245555555544
No 278
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=46.93 E-value=1.1e+02 Score=25.76 Aligned_cols=67 Identities=19% Similarity=0.085 Sum_probs=37.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~----~~~~v~~~~~ 96 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFV-STNVT----SEDSVLAAIE 96 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHH
Confidence 3456666655444455666777889888876544333444445555555555 44422 4555555544
No 279
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.39 E-value=1e+02 Score=25.64 Aligned_cols=97 Identities=18% Similarity=0.076 Sum_probs=52.2
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~ 165 (398)
+.+++|.+++..=..+...|.+.|-+|++.+-.-...... ...+.+...+ ..|-. |.+++++.++ ...++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-~~~~~~~~~~-~~Dv~----~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF-AKERPNLFYF-HGDVA----DPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HTTCTTEEEE-ECCTT----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhcCCEEEE-EecCC----CHHHHHHHHHHHHHHcCCC
Confidence 3466666665544566667778898888765443222232 2334455555 44422 5555555544 22335
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
..++-+...++.+. -.+.++++++.++
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 66654433343343 2567777777664
No 280
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=46.16 E-value=86 Score=25.61 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=48.0
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCCe
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPK 166 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~ 166 (398)
.+++|.++...=..+...|.+.|.+|++..-.-.......+..+..+..+ ..|-. |.+.+++.++ ....+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI-VADLA----HHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTT----SHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEE-ECCCC----CHHHHHHHHHHHHHhcCCCc
Confidence 45666555444445556677788888776544333333333333344444 44322 5556655554 112256
Q ss_pred EEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 167 LVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 167 ~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
+++-+....+.+. -.+.++++++.+.
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 7665544333322 2466666666553
No 281
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=45.91 E-value=1.3e+02 Score=25.04 Aligned_cols=98 Identities=12% Similarity=0.031 Sum_probs=50.6
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---Hhc--CcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMT--GVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
...+++|.++...=..+...|.+.|.+|++..-.-....... +.. +..+..+ ..|-. |.+.+++.++...
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV-VADLG----TEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEE-ECCTT----SHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEE-ecCCC----CHHHHHHHHHhcC
Confidence 345666655544444556667788888877654332222222 111 3455555 44322 5667777776544
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+..++-+......+. -.+.++++++.+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4677665533222222 245566655544
No 282
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.71 E-value=74 Score=27.52 Aligned_cols=69 Identities=9% Similarity=0.017 Sum_probs=43.4
Q ss_pred HhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 131 ~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
...|+-+-.+-|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. ++.+|+
T Consensus 15 ~~~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~G-v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 15 RLGTLLTAMVTPFSGDG-SLDTATAARLANHLVDQG-CDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp HHCSEEEECCCCBCTTS-CBCHHHHHHHHHHHHHTT-CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCceEEEEECCCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 34455433333555554 789998888876 232 5777665 333344568888888888887653 456665
No 283
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=45.38 E-value=1.3e+02 Score=25.04 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=52.8
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..|.++..+ ..|-. |.+.+++.++ ....
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHH-VVDLT----NEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEE-ECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEE-ECCCC----CHHHHHHHHHHHHHHcCC
Confidence 3456666655444455666777888888876655555555555556555544 44322 5566665554 1122
Q ss_pred CeEEEEeCCCC-C-Ccc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGN-P-SGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~n-p-tG~--~~~~~~l~~i~~ 191 (398)
+..++-+.... + .+. -.+.+++++..+
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 56666543322 2 111 346666666554
No 284
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=45.21 E-value=1.4e+02 Score=25.28 Aligned_cols=165 Identities=8% Similarity=0.017 Sum_probs=81.6
Q ss_pred HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecCh--
Q 015890 22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGA-- 98 (398)
Q Consensus 22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~-- 98 (398)
+..+.+.|-+++.++.... |...-|.+.++..+++.++. ....+-+.+.+. ++. ..+..-++++--.
T Consensus 40 ~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~--------~~~~~~~~v~~~-r~~-~~~~Pivlm~Y~n~v 109 (271)
T 3nav_A 40 MQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKT--------TPDICFELIAQI-RAR-NPETPIGLLMYANLV 109 (271)
T ss_dssp HHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTC--------CHHHHHHHHHHH-HHH-CTTSCEEEEECHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC--------CHHHHHHHHHHH-Hhc-CCCCCEEEEecCcHH
Confidence 3334456788888886542 22334666667777765531 112333333332 221 1222334444211
Q ss_pred -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890 99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p 173 (398)
.-++...+..+.+.| |.+++++-.+. .+...++..|+..+.+ -.+.. +.+.+++..+... ..|++.+-
T Consensus 110 ~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l-vap~t----~~eri~~i~~~~~--gfiY~vs~ 182 (271)
T 3nav_A 110 YARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI-APPTA----SDETLRAVAQLGK--GYTYLLSR 182 (271)
T ss_dssp HHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE-ECTTC----CHHHHHHHHHHCC--SCEEECCC
T ss_pred HHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE-ECCCC----CHHHHHHHHHHCC--CeEEEEec
Confidence 112333444444445 78888766553 3556778889887765 22211 4566776666543 55666544
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHc-CCEEEEe
Q 015890 174 GNPSGTYI-PERLLKRISDLCKAA-GSWLVVD 203 (398)
Q Consensus 174 ~nptG~~~-~~~~l~~i~~l~~~~-~~~livD 203 (398)
..-||.-. ..+.+.++.+.++++ ++++++.
T Consensus 183 ~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vG 214 (271)
T 3nav_A 183 AGVTGAETKANMPVHALLERLQQFDAPPALLG 214 (271)
T ss_dssp C--------CCHHHHHHHHHHHHTTCCCEEEC
T ss_pred cCCCCcccCCchhHHHHHHHHHHhcCCCEEEE
Confidence 45577642 123466666665654 4555554
No 285
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=45.19 E-value=65 Score=28.38 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=44.3
Q ss_pred CCCCcChhhHHHhc-CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015890 120 APYYFNSYMSFQMT-GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 120 ~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
-|.|....++.... ++++..+ -++.. .-.+.+.+.+.... ++++++.+. | ++.++.+++.++|+++|+
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi-~vp~~---~a~~ai~ea~~~~G-v~~vViiT~----G--~~e~~~~~l~~~a~~~g~ 132 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLIN-FASLR---SAYDSTMETMNYAQ-IRTIAIIAE----G--IPEALTRKLIKKADQKGV 132 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEE-CCCTT---THHHHHHHHTTSTT-CCEEEECCS----C--CCHHHHHHHHHHHHHHTC
T ss_pred ceeeCCHHHHhhcCCCCcEEEE-ecCHH---HHHHHHHHHHHHCC-CCEEEEECC----C--CCHHHHHHHHHHHHHcCC
Confidence 35666666665544 3454443 22211 12466677777443 566666432 2 234668899999999998
Q ss_pred EEEEeece
Q 015890 199 WLVVDNTY 206 (398)
Q Consensus 199 ~livDe~~ 206 (398)
.++==.+.
T Consensus 133 rliGPNc~ 140 (334)
T 3mwd_B 133 TIIGPATV 140 (334)
T ss_dssp EEECSSCC
T ss_pred EEEccCCc
Confidence 87754444
No 286
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=44.73 E-value=1.4e+02 Score=25.02 Aligned_cols=101 Identities=11% Similarity=0.011 Sum_probs=53.8
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-- 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-- 160 (398)
......+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~ 97 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAV-AFDVT----SESEIIEAFARL 97 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC-CCCTT----CHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EcCCC----CHHHHHHHHHHH
Confidence 3444556666655444455666777889888876544322222 223446666666 44422 5666666554
Q ss_pred --cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 --TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 --~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 2223566665533322222 246666666654
No 287
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=44.42 E-value=52 Score=28.86 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=44.3
Q ss_pred ccCCCEEEEeCCCCcC----------hhhHHHhcCcEEEEeccCCC-CCCC--CC---hHHHHHhhccCCCCeEEEEeCC
Q 015890 110 CDAGDSVVMFAPYYFN----------SYMSFQMTGVTHILVGPCSS-KTLH--PD---ADWLEKTLETKPTPKLVSVVNP 173 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~----------~~~~~~~~g~~~~~~~~~~~-~~~~--~d---~e~l~~~l~~~~~~~~v~i~~p 173 (398)
+++||+|-+..|+... ....++..|++++.-+.... +++. -| .++|.+++.... +++|+....
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~-i~aI~~~rG 87 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSS-VKAILTVIG 87 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTT-EEEEEESCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCC-CCEEEEcCC
Confidence 5789999999888532 12346788999887622221 1211 12 556666666544 899988766
Q ss_pred CCCCccCCC
Q 015890 174 GNPSGTYIP 182 (398)
Q Consensus 174 ~nptG~~~~ 182 (398)
..-+-.++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 555555554
No 288
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=44.29 E-value=91 Score=27.37 Aligned_cols=95 Identities=9% Similarity=0.079 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcc-CCCEEEEeCCCCcChhhHHHhcCcE---EEEeccCCCCCCCCChHHH-H---Hh---hccCCCCeEE
Q 015890 100 QAFVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSSKTLHPDADWL-E---KT---LETKPTPKLV 168 (398)
Q Consensus 100 ~a~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~e~l-~---~~---l~~~~~~~~v 168 (398)
-++..+.....+ +|.+++..+..+......++.+|+. +....+. +.|++ . +. ++... +++|
T Consensus 44 L~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~-------~~E~~~l~i~~~l~~i~~~~-~~lv 115 (333)
T 3io5_A 44 FGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ-------SLEQLRIDMVNQLDAIERGE-KVVV 115 (333)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS-------BHHHHHHHHHHHHHTCCTTC-CEEE
T ss_pred HHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC-------CHHHHHHHHHHHHHHhhccC-ceEE
Confidence 334444433332 3667777666654434457777853 2222111 23333 1 22 34433 7999
Q ss_pred EEeCCCCCCcc--C---C--------CH-----HHHHHHHHHHHHcCCEEEE
Q 015890 169 SVVNPGNPSGT--Y---I--------PE-----RLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 169 ~i~~p~nptG~--~---~--------~~-----~~l~~i~~l~~~~~~~liv 202 (398)
+|.+.+..... + + .. ..+++|..+++++|+.+|+
T Consensus 116 VIDSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~ 167 (333)
T 3io5_A 116 FIDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIA 167 (333)
T ss_dssp EEECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 99876544310 0 0 01 1245556678888877654
No 289
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=44.24 E-value=81 Score=31.81 Aligned_cols=116 Identities=8% Similarity=-0.029 Sum_probs=65.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhc---cCC-C-E----EEEeCCCCc-------------C------hhhHHHhcCcEEEE
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLC---DAG-D-S----VVMFAPYYF-------------N------SYMSFQMTGVTHIL 139 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~---~~g-d-~----Vl~~~p~~~-------------~------~~~~~~~~g~~~~~ 139 (398)
+.+.|.++.++..+++..+++|. ..+ . . .+...|.|. + +...+..+++++..
T Consensus 267 ~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~lh 346 (858)
T 1c7s_A 267 GKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFH 346 (858)
T ss_dssp CSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 35578888888788877777764 222 2 1 233445441 1 22345566777776
Q ss_pred eccCCCCCCCCChHHHHHhhccCC-----CC--eEEE--EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 140 VGPCSSKTLHPDADWLEKTLETKP-----TP--KLVS--VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 140 ~~~~~~~~~~~d~e~l~~~l~~~~-----~~--~~v~--i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
++..|+.+|.+..+.+-++-+.+. .. ..+. +.+...+.|..++.+++++|++.|+++|+-||-.
T Consensus 347 ~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIPE 419 (858)
T 1c7s_A 347 FHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPE 419 (858)
T ss_dssp EECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 645666667665444333221100 00 0000 0000013466899999999999999999998843
No 290
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=43.81 E-value=39 Score=27.59 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|+++..+. .+...|.+|++..|.-.. -...+...|.....+ +.. +.+++.+.+.. ...+|+|.-.+.
T Consensus 43 T~lL~~a~-r~~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~-~~~------~~~~~~~~~~~--~~dvViIDEaQF 112 (214)
T 2j9r_A 43 EELIRRVR-RTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV-PVS------ASKDIFKHITE--EMDVIAIDEVQF 112 (214)
T ss_dssp HHHHHHHH-HHHHTTCCEEEEECC-----------------CCEE-ECS------SGGGGGGGCCS--SCCEEEECCGGG
T ss_pred HHHHHHHH-HHHHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEe-ecC------CHHHHHHHHhc--CCCEEEEECccc
Confidence 45555544 444567788888766532 223444445543333 322 12233333332 257888886554
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
++++.++.+.+++. .|+.+|+=.
T Consensus 113 -----~~~~~V~~l~~l~~-~~~~Vi~~G 135 (214)
T 2j9r_A 113 -----FDGDIVEVVQVLAN-RGYRVIVAG 135 (214)
T ss_dssp -----SCTTHHHHHHHHHH-TTCEEEEEE
T ss_pred -----CCHHHHHHHHHHhh-CCCEEEEEe
Confidence 66667766666665 488888644
No 291
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=43.78 E-value=1.2e+02 Score=24.40 Aligned_cols=95 Identities=7% Similarity=-0.034 Sum_probs=49.6
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEE
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSV 170 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i 170 (398)
+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++.-. ....++-
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR-ARDLA----SHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEE-ECCTT----CHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeE-eecCC----CHHHHHHHHHHHhhcCCEEEE
Confidence 5666655444455566677788777776544333444444444444444 34322 5677777776321 1245544
Q ss_pred eCCCCCCcc--CCCHHHHHHHHH
Q 015890 171 VNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 171 ~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+....+.+. -.+.+++++..+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHH
Confidence 433333332 246666666555
No 292
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.71 E-value=1.2e+02 Score=24.11 Aligned_cols=43 Identities=9% Similarity=-0.067 Sum_probs=23.1
Q ss_pred EecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEe
Q 015890 94 VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140 (398)
Q Consensus 94 ~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 140 (398)
...+-.+++..+-.. +.|..|++...+-..+.. +..+..++.+
T Consensus 34 ~~~~l~~~v~~a~~~--~~~~dVIISRGgta~~lr--~~~~iPVV~I 76 (196)
T 2q5c_A 34 KTASLTRASKIAFGL--QDEVDAIISRGATSDYIK--KSVSIPSISI 76 (196)
T ss_dssp EECCHHHHHHHHHHH--TTTCSEEEEEHHHHHHHH--TTCSSCEEEE
T ss_pred EECCHHHHHHHHHHh--cCCCeEEEECChHHHHHH--HhCCCCEEEE
Confidence 444455566655543 566567776644322222 3345677766
No 293
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=43.45 E-value=29 Score=28.00 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=28.2
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|.+|+..-..|+.|.... +.++.+++++||+.++.
T Consensus 160 Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 160 PAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 577777755688899999 77788888899998874
No 294
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=42.67 E-value=1.4e+02 Score=24.54 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=43.1
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFA-PADVT----SEKDVQTALALAKGKFGR 86 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHHHHHHHCCC
Confidence 4556666655444455666677788888776444334444444445555555 44322 5566666554 1112
Q ss_pred CeEEEEeC
Q 015890 165 PKLVSVVN 172 (398)
Q Consensus 165 ~~~v~i~~ 172 (398)
+.+|+-+.
T Consensus 87 id~li~~A 94 (265)
T 2o23_A 87 VDVAVNCA 94 (265)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 56666553
No 295
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=42.17 E-value=45 Score=24.85 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=38.1
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (398)
..++..|.+++.+ |....++++.+...+.. +++|.++.-..+ ..+.++++++.+++.+
T Consensus 25 ~~l~~~G~~Vi~l------G~~~p~e~~v~~a~~~~-~d~v~lS~~~~~-----~~~~~~~~i~~l~~~g 82 (137)
T 1ccw_A 25 HAFTNAGFNVVNI------GVLSPQELFIKAAIETK-ADAILVSSLYGQ-----GEIDCKGLRQKCDEAG 82 (137)
T ss_dssp HHHHHTTCEEEEE------EEEECHHHHHHHHHHHT-CSEEEEEECSST-----HHHHHTTHHHHHHHTT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHhcC-CCEEEEEecCcC-----cHHHHHHHHHHHHhcC
Confidence 5678889999877 22357788877776443 588888744322 2345677777777653
No 296
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=41.64 E-value=1.5e+02 Score=24.63 Aligned_cols=98 Identities=19% Similarity=0.175 Sum_probs=49.5
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.++...=..+...|.+.|.+|++..-.-....... +..|.++..+ ..|-. |.+.+++.++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~----~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-RCDVS----NYEEVKKLLEAVKE 95 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEE-EcCCC----CHHHHHHHHHHHHH
Confidence 445666665544445566667788888877543322222222 2235555555 44422 5566666554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.++++++.+
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 1122566665433222222 245566666554
No 297
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=41.54 E-value=1.4e+02 Score=24.90 Aligned_cols=99 Identities=12% Similarity=0.032 Sum_probs=54.4
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----c
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~ 161 (398)
.+.+++|.+++..=..+...|.+.|-+|++..-.-.... ..++..|.++..+ ..|-. |.+++++.++ .
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~-~~Dvt----~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV-KADVS----KKKDVEEFVRRTFET 81 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTT----SHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EccCC----CHHHHHHHHHHHHHH
Confidence 455666655544444555567788888887654432222 2345567777777 55532 5666666554 2
Q ss_pred CCCCeEEEEeCC-CCCCcc--CCCHHHHHHHHHH
Q 015890 162 KPTPKLVSVVNP-GNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 162 ~~~~~~v~i~~p-~nptG~--~~~~~~l~~i~~l 192 (398)
..++..++-+.. ..+.+. -++.++++++.++
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 232555553332 223332 3677778877764
No 298
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=41.47 E-value=1.5e+02 Score=24.65 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=49.2
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCC
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~ 163 (398)
.+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++ ...
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQ-VLDVT----DRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-ECCTT----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EcCCC----CHHHHHHHHHHHHHHcC
Confidence 45555554333345555677888888776443322222 233446666666 44422 5566655554 212
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+.+++-+....+.+. -.+.++++++.+
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2566665543333332 246666666555
No 299
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=41.11 E-value=20 Score=33.07 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEee
Confidence 4788999999999999999999998
No 300
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.04 E-value=63 Score=27.84 Aligned_cols=58 Identities=5% Similarity=0.017 Sum_probs=37.5
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+.+|+
T Consensus 18 Pf~~dg-~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDG-SIHYEQLRDLIDWHIENG-TDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 444444 689888888776 232 5777765 333344568888888888877653 355554
No 301
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.82 E-value=1.5e+02 Score=24.38 Aligned_cols=98 Identities=10% Similarity=0.060 Sum_probs=52.0
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TK 162 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~ 162 (398)
...+++|.+++..=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++ ..
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR-SLDAR----NEDEVTAFLNAADAH 81 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE-ECCTT----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-ECcCC----CHHHHHHHHHHHHhh
Confidence 3456666666544455666677888888776544333332 233446666666 55432 5556555554 11
Q ss_pred CCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 163 PTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
..+..++-+......+. -.+.+++++..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 33566554433333222 256666666554
No 302
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=40.76 E-value=91 Score=28.79 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=53.9
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~ 165 (398)
+....|++..||..|...+ ..|.+.|-+|.+.+|....-...+ ...+++.+.- . + +.++++ + .
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~-~-----~--~~~~l~-----~--~ 73 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEG-P-----F--DETLLD-----S--C 73 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEES-S-----C--CGGGGT-----T--C
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEEC-C-----C--CccccC-----C--c
Confidence 4456788888887776655 566677888888777654322222 2223443321 1 1 222221 1 3
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEeece
Q 015890 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTY 206 (398)
Q Consensus 166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-ivDe~~ 206 (398)
.+|+.. ++++ +.=..+.+.|++.|+++ ++|+.-
T Consensus 74 ~lVi~a-t~~~-------~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 74 WLAIAA-TDDD-------TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp SEEEEC-CSCH-------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred cEEEEc-CCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 555553 4332 22467888999999986 577644
No 303
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=40.74 E-value=1.7e+02 Score=24.96 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=43.3
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++..+++..+.| .-.++.+|++.+.+ ... +..+++..|.+.++ ... +++|+.....++ ...+.
T Consensus 189 ~~~~~v~~H~af---~Yf~~~yGl~~~~~-~~~--~~eps~~~l~~l~~~ik~~~-v~~If~e~~~~~-------~~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSW---AYFARDYNLVQIPI-EVE--GQEPSAQELKQLIDTAKENN-LTMVFGETQFST-------KSSEA 254 (291)
T ss_dssp SCCEEEESSCCC---HHHHHHTTCEEEES-CBT--TBCCCHHHHHHHHHHHHTTT-CCEEEEETTSCC-------HHHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCEEeec-ccC--CCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCCh-------HHHHH
Confidence 456777776654 33468899998876 322 34567666666554 444 688877643332 11333
Q ss_pred HHHHHHHcCCEEE
Q 015890 189 ISDLCKAAGSWLV 201 (398)
Q Consensus 189 i~~l~~~~~~~li 201 (398)
| +++.|+.++
T Consensus 255 i---a~~~g~~v~ 264 (291)
T 1pq4_A 255 I---AAEIGAGVE 264 (291)
T ss_dssp H---HHHHTCEEE
T ss_pred H---HHHcCCeEE
Confidence 3 567776654
No 304
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=40.74 E-value=62 Score=28.05 Aligned_cols=58 Identities=19% Similarity=0.185 Sum_probs=37.3
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. ++.+|+
T Consensus 25 Pf~~dg-~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATA-EVDYGKLEENLHKLGTFP-FRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHTTSC-CSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 444444 689988888776 222 5777765 222233568888889999888764 355554
No 305
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=40.57 E-value=1.1e+02 Score=25.63 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=49.5
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCV-PTDVT----DPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEE-ECCTT----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEE-EecCC----CHHHHHHHHHHHHHHcCCC
Confidence 345555544333345556677888888876544333444444445444444 44322 5566665554 11225
Q ss_pred eEEEEeCCCC-CCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGN-PSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~n-ptG~--~~~~~~l~~i~~ 191 (398)
.+++-+.... +.+. -.+.++++++.+
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 6666553322 2122 246666666655
No 306
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=40.41 E-value=1.7e+02 Score=24.81 Aligned_cols=50 Identities=12% Similarity=0.089 Sum_probs=37.7
Q ss_pred CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
+|.+|..++.++...+. .+|.+... .++.++++++.+.|++.|+-+++|-
T Consensus 127 dfi~d~~qi~ea~~~GA--D~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGA--DCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTC--SEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCC--CEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 35678878888776553 67766632 3577889999999999999988873
No 307
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=40.35 E-value=96 Score=26.81 Aligned_cols=67 Identities=9% Similarity=-0.008 Sum_probs=41.3
Q ss_pred cCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 133 TGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 133 ~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
.|+-+-.+-|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++.+.+.+. .+++|+
T Consensus 18 ~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~G-v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 18 GTVGVAMVTPFTESG-DIDIAAGREVAAYLVDKG-LDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CSEEEECCCCBCTTS-CBCHHHHHHHHHHHHHTT-CCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CceEEeeeccCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 454333232454444 789999888877 332 5777765 333344568888888888887653 355553
No 308
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=40.32 E-value=54 Score=28.53 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=38.8
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~--~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. ++.+|+
T Consensus 19 Pf~~dg-~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDDG-KIDDVSIDRLTDFYAEVG-CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTT-CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHCC-CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 455444 789999888876 332 5777765 233334568899999999987765 456655
No 309
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=39.93 E-value=61 Score=24.70 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=38.3
Q ss_pred CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH-HHHHHHHH-HHHHcCCE-EEEeece
Q 015890 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE-RLLKRISD-LCKAAGSW-LVVDNTY 206 (398)
Q Consensus 148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~-l~~~~~~~-livDe~~ 206 (398)
...+.+.|.+.+++.. +..++|.-|-|.-|..-.. ...+..+. ++.+.++. .++||.+
T Consensus 40 ~~~~~~~l~~li~~~~-~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~ 100 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYT-IDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERL 100 (150)
T ss_dssp TBCCHHHHHHHHTTSE-EEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSS
T ss_pred hHHHHHHHHHHHHHcC-CCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCC
Confidence 3457899999999776 7999999887666665322 22355553 44455665 4578866
No 310
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=39.82 E-value=94 Score=27.81 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=44.3
Q ss_pred ccCCCEEEEeCCCCcCh----------hhHHHhcCcEEEEeccCC-C-CCC--CCC---hHHHHHhhccCCCCeEEEEeC
Q 015890 110 CDAGDSVVMFAPYYFNS----------YMSFQMTGVTHILVGPCS-S-KTL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~----------~~~~~~~g~~~~~~~~~~-~-~~~--~~d---~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++||+|-+..|+.... ...++..|++++.- +.- . +++ .-| +++|.+++.... +++|+...
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~af~Dp~-i~aI~~~r 117 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSG-KLTGKTDFYRSGTIKERAQEFNELVYNPD-ITCIMSTI 117 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHTCTT-EEEEEESC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC-CchhcccCccCCCHHHHHHHHHHHhhCCC-CCEEEEcc
Confidence 47899999999986431 23457789998876 332 1 111 112 556666666443 79988876
Q ss_pred CCCCCccCCC
Q 015890 173 PGNPSGTYIP 182 (398)
Q Consensus 173 p~nptG~~~~ 182 (398)
...-+-.+++
T Consensus 118 GGyga~rlLp 127 (371)
T 3tla_A 118 GGDNSNSLLP 127 (371)
T ss_dssp CCSCGGGGGG
T ss_pred ccccHHHHHh
Confidence 6555555554
No 311
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=39.81 E-value=93 Score=25.24 Aligned_cols=86 Identities=14% Similarity=0.139 Sum_probs=48.4
Q ss_pred EEEecChHHHHHHHHHHhccC--CCEE--EEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh----HHHHHhhccCC
Q 015890 92 VMVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA----DWLEKTLETKP 163 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~--gd~V--l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~----e~l~~~l~~~~ 163 (398)
.++.+|+.+....++..+... +-+| ++.++.-......++..|+.+..+.+.+ + .+. +++.+.++...
T Consensus 7 ~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~---~-~~~~~~~~~~~~~l~~~~ 82 (212)
T 3av3_A 7 AVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKD---Y-PSKAAFESEILRELKGRQ 82 (212)
T ss_dssp EEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG---S-SSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc---c-cchhhhHHHHHHHHHhcC
Confidence 345566556666677777654 2233 3445433456667889999887662221 1 122 23445555443
Q ss_pred CCeEEEEeCCCCCCccCCCHHHH
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l 186 (398)
+.++++.. .|.+++++.+
T Consensus 83 -~Dliv~a~----y~~il~~~~l 100 (212)
T 3av3_A 83 -IDWIALAG----YMRLIGPTLL 100 (212)
T ss_dssp -CCEEEESS----CCSCCCHHHH
T ss_pred -CCEEEEch----hhhhCCHHHH
Confidence 68888762 4678886554
No 312
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=39.80 E-value=1.5e+02 Score=24.01 Aligned_cols=72 Identities=7% Similarity=-0.053 Sum_probs=45.6
Q ss_pred CEEEEeCCCC--cC-----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEE--eCCCCCCccCCCHH
Q 015890 114 DSVVMFAPYY--FN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV--VNPGNPSGTYIPER 184 (398)
Q Consensus 114 d~Vl~~~p~~--~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i--~~p~nptG~~~~~~ 184 (398)
.+|++..+.- |. ....++..|.+++.+ |-...++++.+.+.+.. +++|.+ +.-..+ +.+
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~L------G~~vp~e~iv~~~~~~~-~d~v~l~~S~l~~~-----~~~ 160 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDL------GVDVLNENVVEEAAKHK-GEKVLLVGSALMTT-----SML 160 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEEC------CSSCCHHHHHHHHHHTT-TSCEEEEEECSSHH-----HHT
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEc------CCCCCHHHHHHHHHHcC-CCEEEEEchhcccC-----cHH
Confidence 4676654332 22 335678899999887 33457888877766544 688888 533221 233
Q ss_pred HHHHHHHHHHHcC
Q 015890 185 LLKRISDLCKAAG 197 (398)
Q Consensus 185 ~l~~i~~l~~~~~ 197 (398)
.++++++.+++.+
T Consensus 161 ~~~~~i~~l~~~~ 173 (215)
T 3ezx_A 161 GQKDLMDRLNEEK 173 (215)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 4788888887764
No 313
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=39.57 E-value=1.5e+02 Score=24.70 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=53.0
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe-CCCCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF-APYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE- 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~-~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~- 160 (398)
......+++|.++...=..+...|.+.|.+|++. ...-.. ....++..|.++..+ ..|-. |.+.+++.++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~ 102 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADNR----DAEAIEQAIRE 102 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHH
Confidence 3445567777666544455666777889888765 322111 122334456666666 55422 5666666554
Q ss_pred ---cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 ---TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ---~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2122566665433222222 246666666655
No 314
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=39.55 E-value=1.2e+02 Score=26.90 Aligned_cols=70 Identities=9% Similarity=-0.022 Sum_probs=43.6
Q ss_pred HHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
.+..|+-+-.+-|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+.+|+
T Consensus 58 ~~~~Gi~~alvTPF~~dg-~ID~~al~~lv~~li~~G-v~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 58 IKALRVITAIKTPYLPDG-RFDLEAYDDLVNIQIQNG-AEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp HHTCCEEEECCCCBCTTS-SBCHHHHHHHHHHHHHTT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cccCCeEEEEeCcCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 344554333333555554 789999988876 333 5777765 333344578888888888877543 356654
No 315
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=38.64 E-value=1.6e+02 Score=23.97 Aligned_cols=98 Identities=11% Similarity=0.063 Sum_probs=50.8
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----c
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~ 161 (398)
...+++|.++...=..+...|.+.|.+|++....-.... ..++..|.++..+ ..|-. |.+.+++.++ .
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL-VLNIS----DIESIQNFFAEIKAE 79 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-EecCC----CHHHHHHHHHHHHHH
Confidence 345666655544444556667778888877654332222 2234446566555 44422 5556655554 2
Q ss_pred CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 162 KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
...+..++-+....+.+. -.+.+++++..+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 233566665543332222 246566665554
No 316
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=38.45 E-value=1.7e+02 Score=24.39 Aligned_cols=98 Identities=11% Similarity=0.070 Sum_probs=50.4
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.++...=..+...|.+.|.+|++..-.-....... ...|.++..+ ..|-. |.+.+++.++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPL-SMDVR----APPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-EcCCC----CHHHHHHHHHHHHH
Confidence 345666665544445566677788888877654332222222 2235566655 44422 5556655554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 2122566665533222222 246666666654
No 317
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.35 E-value=1.3e+02 Score=25.18 Aligned_cols=99 Identities=12% Similarity=0.008 Sum_probs=50.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCC-CCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP-YYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
....+++|.+++..=..+...|.+.|.+|++..- .-.. ....++..|.++..+ ..|-. |.+.+++.++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV-KADVS----QESEVEALFAAVI 101 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTT----SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHHHH
Confidence 3455666655544444556667788888876433 2111 122334456566665 44422 5566665554
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+....+.+. -.+.++++++.+
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1122566665543332222 246666666654
No 318
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=38.10 E-value=1.6e+02 Score=24.20 Aligned_cols=100 Identities=18% Similarity=0.125 Sum_probs=51.4
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
.....+++|.++...=..+...|.+.|.+|++..-.-.... ..++..|.++..+ ..|-. |.+.+++.++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGL-ECNVT----DEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHHHH
Confidence 33455666655544444556667778888877654332222 2233446666666 44422 5566655554
Q ss_pred -cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT-YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 2122566665533222222 356666666554
No 319
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=37.89 E-value=77 Score=27.53 Aligned_cols=68 Identities=6% Similarity=0.026 Sum_probs=38.7
Q ss_pred hcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 132 MTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 132 ~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
..|+-+-.+-|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+.+|+
T Consensus 8 ~~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 8 ECKIITAFITPFHEDG-SINFDAIPALIEHLLAHH-TDGILLA-GTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TCCEEEECCCCBCTTS-SBCTTHHHHHHHHHHHTT-CCCEEES-STTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred cCceEEeeecCCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3444333332454443 678888777766 222 4666655 233344567888888888877654 344443
No 320
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=37.85 E-value=1.7e+02 Score=24.16 Aligned_cols=100 Identities=13% Similarity=0.148 Sum_probs=58.0
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCC---------C-----cChhhHHHhcCcEEEEeccCCCCCCCCChHHHH
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY---------Y-----FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~---------~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 156 (398)
-++..+||..+..++..+. +.|-+|...... | ......++.+|+....+ +..... .-..+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v-~~~g~~-~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKG-FTQGEK-EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEE-EC-------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEE-ECCCCc-hHHHHHHH
Confidence 4677799988888777554 456555322111 1 11335678889876666 443211 11367777
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
+.++.-. +.+++ +|.+.+......+-+.|.+.|+..+
T Consensus 84 ~~l~~~~-i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLK-IQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSC-CSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcC-CcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 7776532 45665 5777766677888888988887754
No 321
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=37.77 E-value=1.7e+02 Score=24.49 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=44.2
Q ss_pred CEEEEeCCCC--cC-----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890 114 DSVVMFAPYY--FN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 114 d~Vl~~~p~~--~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 186 (398)
.+|++..+.- +. ....++..|.+++.+ .. ...++.+.+.+.... +.+|.++.-..++ .+.+
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~L-G~-----~vp~e~l~~~~~~~~-~d~V~lS~l~~~~-----~~~~ 191 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDL-GR-----DVPAEEVLAAVQKEK-PIMLTGTALMTTT-----MYAF 191 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEE-EE-----ECCSHHHHHHHHHHC-CSEEEEECCCTTT-----TTHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEEC-CC-----CCCHHHHHHHHHHcC-CCEEEEEeeccCC-----HHHH
Confidence 4677654432 22 335668889999877 22 346677777666443 5888887443322 2347
Q ss_pred HHHHHHHHHcC
Q 015890 187 KRISDLCKAAG 197 (398)
Q Consensus 187 ~~i~~l~~~~~ 197 (398)
+++++.+++.+
T Consensus 192 ~~~i~~l~~~~ 202 (258)
T 2i2x_B 192 KEVNDMLLENG 202 (258)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHhcC
Confidence 88888777654
No 322
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.69 E-value=1.7e+02 Score=24.45 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=49.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TK 162 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~ 162 (398)
..+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++ ..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS-SCDVT----STDEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEE-ECCTT----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHHHHHHc
Confidence 446666555444445566677888888776543322222 223345566555 44422 5566655554 21
Q ss_pred CCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 163 PTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
..+.+++-+....+.+. -.+.++++++.+
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22566665543333232 246666665554
No 323
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=37.56 E-value=1.7e+02 Score=23.96 Aligned_cols=98 Identities=13% Similarity=0.034 Sum_probs=49.6
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC-cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~ 163 (398)
...+++|.++...=..+...|.+.|.+|++..-.- ......++..|.++..+ ..|-. |.+.+++.++ ...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTV-KCDVS----QPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEE-EeecC----CHHHHHHHHHHHHHHcC
Confidence 34566666554444556666777888887654322 12222334456555555 44422 5566665543 112
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+.+++-+....+.+. -.+.++++++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 82 RCDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2566665533322222 245566655554
No 324
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=37.31 E-value=53 Score=28.01 Aligned_cols=77 Identities=10% Similarity=0.131 Sum_probs=43.0
Q ss_pred ecChHHHHHHHHHHhccCCCEEEEeCCCC--cChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhcc-CCCCeEEEE
Q 015890 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLET-KPTPKLVSV 170 (398)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~-~~~~~~v~i 170 (398)
..+.++++...+.....+|.+|+++.+.- ......++..|+++..+ ++.+.....+ .+.+.+.+.. .. +.+|++
T Consensus 139 ~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~-~~Y~~~~~~~~~~~~~~~l~~~~~-~d~v~f 216 (286)
T 1jr2_A 139 TCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESI-TVYQTVAHPGIQGNLNSYYSQQGV-PASITF 216 (286)
T ss_dssp SCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEE-ECEEEEECTTHHHHHHHHHHHHCS-CSEEEE
T ss_pred CccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEE-EEEEEeeCCCcHHHHHHHHHhCCC-CCEEEE
Confidence 44555666655544334577888876654 34566778888877766 4432211112 2355555543 22 567776
Q ss_pred eCC
Q 015890 171 VNP 173 (398)
Q Consensus 171 ~~p 173 (398)
.+|
T Consensus 217 tS~ 219 (286)
T 1jr2_A 217 FSP 219 (286)
T ss_dssp SSH
T ss_pred ECh
Confidence 644
No 325
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.21 E-value=1.1e+02 Score=26.96 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=44.4
Q ss_pred ccCCCEEEEeCCCCcCh----------hhHHHhcCcEEEEeccC-CC-CCC--CCC---hHHHHHhhccCCCCeEEEEeC
Q 015890 110 CDAGDSVVMFAPYYFNS----------YMSFQMTGVTHILVGPC-SS-KTL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~----------~~~~~~~g~~~~~~~~~-~~-~~~--~~d---~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++||+|-+..|+.... ...++..|++++.- +. .. +++ .-| +++|.+++.... +++|+...
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~-i~aI~~~r 86 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFS-THAEEIDRFASSSISSRVQDLHEAFRDPN-VKAILTTL 86 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEEC-TTTTCCCTTSSCCHHHHHHHHHHHHHCTT-EEEEEESC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC-CchhcccCccCCCHHHHHHHHHHHhhCCC-CCEEEEcc
Confidence 57899999998887532 13457789999876 32 21 121 112 556666666543 79988876
Q ss_pred CCCCCccCCC
Q 015890 173 PGNPSGTYIP 182 (398)
Q Consensus 173 p~nptG~~~~ 182 (398)
...-+-.+++
T Consensus 87 GG~g~~rlL~ 96 (331)
T 4e5s_A 87 GGYNSNGLLK 96 (331)
T ss_dssp CCSCGGGGGG
T ss_pred ccccHHHHHh
Confidence 6555555544
No 326
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=36.95 E-value=1.6e+02 Score=24.79 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=49.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC-----------Cc-----Ch---hhHHHhcCcEEEEeccCCCCCCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY-----------YF-----NS---YMSFQMTGVTHILVGPCSSKTLH 149 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~-----------~~-----~~---~~~~~~~g~~~~~~~~~~~~~~~ 149 (398)
...+++|.+++..=..+...|.+.|.+|++..-. +. .. ...++..+.++..+ ..|-.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~--- 86 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA-EVDVR--- 86 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE-ECCTT---
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE-EcCCC---
Confidence 4456666665444455666777889888765322 10 01 11223345556555 44422
Q ss_pred CChHHHHHhhc----cCCCCeEEEEeCCCCCCcc---CCCHHHHHHHHH
Q 015890 150 PDADWLEKTLE----TKPTPKLVSVVNPGNPSGT---YIPERLLKRISD 191 (398)
Q Consensus 150 ~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~---~~~~~~l~~i~~ 191 (398)
|.+.+++.++ ....+.+++-+......+. -.+.+++++..+
T Consensus 87 -~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 87 -DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp -CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 5566665554 2122566665533322222 246666666554
No 327
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=36.61 E-value=2e+02 Score=24.47 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH---HHhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
....+++|.++...=..+...|.+.|.+|++..-.-...... ++..|.++..+ ..|-. |.+.+++.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV-VCDVR----HLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE-EccCC----CHHHHHHHHHHHHH
Confidence 345567666654444456666778888887765443222222 23345566655 44422 5566665554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.++++++.+
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 1122566665543333332 246666666554
No 328
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=36.60 E-value=2.1e+02 Score=24.71 Aligned_cols=100 Identities=12% Similarity=0.005 Sum_probs=51.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHh-------cCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQM-------TGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~-------~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
...|++|.++...=..++..|.+.|.+|.+..-.-..... .+.. .+++++.. +. -|.+.+++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl------~d~~~~~~~ 97 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-DI------RDLTTCEQV 97 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-CT------TCHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-cC------CCHHHHHHH
Confidence 4567777655444455666677778777765432222221 1111 34455443 22 267888888
Q ss_pred hccCCCCeEEEEeCCC-CCCccCCCHH--------HHHHHHHHHHHcCC
Q 015890 159 LETKPTPKLVSVVNPG-NPSGTYIPER--------LLKRISDLCKAAGS 198 (398)
Q Consensus 159 l~~~~~~~~v~i~~p~-nptG~~~~~~--------~l~~i~~l~~~~~~ 198 (398)
++. +.+|+-.... ++.....+.+ -...+++.|++.++
T Consensus 98 ~~~---~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 98 MKG---VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp TTT---CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred hcC---CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 872 4666655322 1111111111 13457888888775
No 329
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=36.59 E-value=2e+02 Score=24.71 Aligned_cols=99 Identities=12% Similarity=-0.030 Sum_probs=50.9
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC----------CcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY----------YFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWL 155 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~----------~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 155 (398)
...+++|.++...=..+...|.+.|.+|++..-. -.. ....++..|.++..+ ..|-. |.+.+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v 101 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD-GSNVA----DWDQA 101 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE-CCCTT----SHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHH
Confidence 3446666555443345556677889888876432 111 222334456677666 55432 56666
Q ss_pred HHhhc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 156 EKTLE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 156 ~~~l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
++.++ ....+.+++-+......+. -.+.++++++.+.
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 65554 1122566654433222222 2466666666553
No 330
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=36.56 E-value=26 Score=32.63 Aligned_cols=25 Identities=16% Similarity=0.020 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4788999999999999999999888
No 331
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=36.47 E-value=72 Score=20.81 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=27.3
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890 355 RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386 (398)
Q Consensus 355 ~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (398)
...+|||+...+..+.+++...|-+++.++.-
T Consensus 45 akrvrisitartkkeaekfaailikvfaelgy 76 (106)
T 1qys_A 45 AKRVRISITARTKKEAEKFAAILIKVFAELGY 76 (106)
T ss_dssp CSEEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEEEecchhHHHHHHHHHHHHHHHhCC
Confidence 46799999887888999999999999988753
No 332
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=36.46 E-value=27 Score=32.11 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5788999999999999999999888
No 333
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=36.33 E-value=75 Score=27.21 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=42.3
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+.+..+....+++.+ -++.. .-.+.+++.++.+. +++++.+ +|. +.++.+++.+.|+++|+.++-
T Consensus 53 y~sl~el~~~~~~D~viI-~tP~~---~~~~~~~ea~~~Gi--~~iVi~t----~G~--~~~~~~~l~~~A~~~gv~liG 120 (288)
T 2nu8_A 53 FNTVREAVAATGATASVI-YVPAP---FCKDSILEAIDAGI--KLIITIT----EGI--PTLDMLTVKVKLDEAGVRMIG 120 (288)
T ss_dssp ESSHHHHHHHHCCCEEEE-CCCGG---GHHHHHHHHHHTTC--SEEEECC----CCC--CHHHHHHHHHHHHHHTCEEEC
T ss_pred cCCHHHHhhcCCCCEEEE-ecCHH---HHHHHHHHHHHCCC--CEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEe
Confidence 444455444334555544 22221 13567777777654 6555432 233 566788999999999998875
Q ss_pred eece
Q 015890 203 DNTY 206 (398)
Q Consensus 203 De~~ 206 (398)
....
T Consensus 121 PNc~ 124 (288)
T 2nu8_A 121 PNTP 124 (288)
T ss_dssp SSCC
T ss_pred cCCc
Confidence 6543
No 334
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=36.31 E-value=27 Score=32.62 Aligned_cols=25 Identities=8% Similarity=-0.063 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4788999999999999999999888
No 335
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=36.16 E-value=1.5e+02 Score=24.81 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=48.6
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC-------Cc-----C---hhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY-------YF-----N---SYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~-------~~-----~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
...+++|.++...=..+...|.+.|.+|++..-. |. . ....++..|.++..+ ..|-. |.+
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~ 87 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR-QADVR----DRE 87 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE-ECCTT----CHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE-eCCCC----CHH
Confidence 4456666655444455666677889888765432 10 0 111223345566665 44422 566
Q ss_pred HHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 154 WLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 154 ~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
.+++.++ ....+.+++-+....+.+. +.++++++.+
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 6666554 2122566665533332222 4555555544
No 336
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=36.08 E-value=1.9e+02 Score=25.00 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=54.1
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEe-CCCCcC--h---hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMF-APYYFN--S---YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~-~p~~~~--~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
..|++|.++...=..++..|.+.|.+|.+. ...-.. - ...+...+++++.. +. -|.+.+++.++...
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~-Dl------~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG-LI------NEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEEC-CT------TCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEe-ec------CCHHHHHHHHhhCC
Confidence 457777654333344556666667666544 322111 1 11233457777655 22 26788888887432
Q ss_pred CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcC-CEEEE
Q 015890 164 TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAG-SWLVV 202 (398)
Q Consensus 164 ~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~-~~liv 202 (398)
+.+|+...+ .|.. .-..+++.|++.| +..++
T Consensus 84 -~d~Vi~~a~~~n~~-------~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 84 -IDIVVSTVGGESIL-------DQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp -CCEEEECCCGGGGG-------GHHHHHHHHHHHCCCSEEE
T ss_pred -CCEEEECCchhhHH-------HHHHHHHHHHHcCCceEEe
Confidence 466665533 2222 2468888888888 65554
No 337
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=36.07 E-value=28 Score=31.63 Aligned_cols=25 Identities=16% Similarity=0.108 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-++
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4788999999999999999999888
No 338
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=35.97 E-value=27 Score=32.94 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999888
No 339
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=35.84 E-value=2.1e+02 Score=24.47 Aligned_cols=111 Identities=11% Similarity=0.099 Sum_probs=61.6
Q ss_pred CcHHHHHHHHHHHhhhcCC-------C-CCc-EEEecChHHHHHHHHHHhccCC--CEEEEeCCCCcChhhHHHhcCcEE
Q 015890 69 GLPELRDALVKKLNQENKL-------Y-KSS-VMVTAGANQAFVNIVLTLCDAG--DSVVMFAPYYFNSYMSFQMTGVTH 137 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~-------~-~~~-v~~~~g~t~a~~~~~~~l~~~g--d~Vl~~~p~~~~~~~~~~~~g~~~ 137 (398)
...++++.+.+.- +.+++ + +.. +++.+|....+..++....... -+|.+--..+......++..|+.+
T Consensus 63 ~~~~L~~~f~~la-~~l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~ 141 (286)
T 3n0v_A 63 DEAGFRAGLAERS-EAFGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPY 141 (286)
T ss_dssp CHHHHHHHHHHHH-GGGTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHH-HHcCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCE
Confidence 4577888887653 33333 1 223 4556666677777777654321 133322223344556789999988
Q ss_pred EEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 138 ILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 138 ~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
..+ |..... ... -+++.+.+++.. +.++++.. .+.+++++.++
T Consensus 142 ~~~-~~~~~~-r~~~~~~~~~~l~~~~-~Dlivla~----y~~il~~~~l~ 185 (286)
T 3n0v_A 142 YHF-ALDPKD-KPGQERKVLQVIEETG-AELVILAR----YMQVLSPELCR 185 (286)
T ss_dssp EEC-CCBTTB-HHHHHHHHHHHHHHHT-CSEEEESS----CCSCCCHHHHH
T ss_pred EEe-CCCcCC-HHHHHHHHHHHHHhcC-CCEEEecc----cccccCHHHHh
Confidence 877 542211 111 124555555433 58888762 56788865543
No 340
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=35.15 E-value=29 Score=32.44 Aligned_cols=25 Identities=16% Similarity=0.037 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999888
No 341
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=35.15 E-value=2.1e+02 Score=24.29 Aligned_cols=99 Identities=18% Similarity=0.067 Sum_probs=51.2
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH---hcC-cEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ---MTG-VTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
....+++|.++...=..+...|.+.|-+|++..-.-.......+ ..+ .++..+ ..|-. |.+.+++.++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV-RLDVS----DPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE-ECCTT----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE-EEeCC----CHHHHHHHHHHHH
Confidence 34456666555444455666677888888876544433333332 223 345555 44322 5556555544
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+....+.+. -.+.++++++.+
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2222566665543333332 346666666655
No 342
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=34.96 E-value=1.9e+02 Score=23.73 Aligned_cols=97 Identities=13% Similarity=0.002 Sum_probs=48.5
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++. ...+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV-RHDVS----SEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEE-CCCTT----CHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEE-EccCC----CHHHHHHHHHHHHHHcCCC
Confidence 446666555444445566677788888776543322233333335455555 44322 55666655541 1225
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++-+....+.+. -.+.+++++..+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 66665433222222 245555655554
No 343
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=34.92 E-value=28 Score=32.05 Aligned_cols=25 Identities=24% Similarity=0.318 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788999999999999999999887
No 344
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=34.79 E-value=52 Score=28.60 Aligned_cols=58 Identities=5% Similarity=-0.001 Sum_probs=0.0
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ +.. +..+++. .++--+..++.++..++++.+.+. .+.+|+
T Consensus 19 Pf~~dg-~iD~~~l~~lv~~li~~G-v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFADTG-DLDLASQKRAVDFMIDAG-SDGLCIL-ANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTT-CSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
No 345
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.77 E-value=71 Score=27.41 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=36.3
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++.+.+.+. .+.+|+
T Consensus 12 Pf~~dg-~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDG-GVDWKSLEKLVEWHIEQG-TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHHT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHCC-CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 444444 689888888776 222 4666655 333344567888888888877653 355554
No 346
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=34.74 E-value=2e+02 Score=23.97 Aligned_cols=98 Identities=10% Similarity=0.111 Sum_probs=50.0
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC--------C-----cC---hhhHHHhcCcEEEEeccCCCCCCCCCh
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY--------Y-----FN---SYMSFQMTGVTHILVGPCSSKTLHPDA 152 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~--------~-----~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~ 152 (398)
...+++|.+++..=..+...|.+.|.+|++..-. + .. .....+..+.++..+ ..|-. |.
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~ 85 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAA-VVDTR----DF 85 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE-ECCCC----CH
Confidence 3456666655444455666777889888775321 0 01 112223445566655 44422 56
Q ss_pred HHHHHhhcc----CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 153 DWLEKTLET----KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 153 e~l~~~l~~----~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+.+++.++. ...+.+++-+......+. -.+.+++++..+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 666665542 122566665543332222 246666666655
No 347
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=34.70 E-value=1.9e+02 Score=23.73 Aligned_cols=97 Identities=9% Similarity=-0.027 Sum_probs=47.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..|.++..+ ..|-. |.+.+++.++ ....+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQ-HLDVT----IEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEE-ECCTT----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEE-EecCC----CHHHHHHHHHHHHHHcCCC
Confidence 456666555444455666677788888765433222233333345445444 44322 5566665554 11225
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++-+......+. -.+.+++++..+
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66665433222221 245555555544
No 348
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=34.64 E-value=2.1e+02 Score=24.09 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=52.8
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----------hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.. ....++..|.++..+ ..|-. |.+.+++.
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~ 83 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI-VGDIR----DGDAVAAA 83 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEE-ECCTT----SHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHH
Confidence 4456666655444455666677888888765433221 122234456677766 55432 55666555
Q ss_pred hc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 159 LE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 159 l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
++ ....+..++-+......+. -.+.++++++.+
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 54 2122576665544333332 356666666655
No 349
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=34.63 E-value=89 Score=27.90 Aligned_cols=40 Identities=18% Similarity=0.106 Sum_probs=21.7
Q ss_pred eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890 322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363 (398)
Q Consensus 322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~ 363 (398)
+.+..+.....++.. +..+.|+....|++|...+ -|++-+
T Consensus 278 i~~~~Gi~~~~~~l~-~~~~~~~~~k~g~w~~~~~-~~~~~g 317 (366)
T 1xp8_A 278 LVYGKGFDQLSDLVG-LAADMDIIKKAGSFYSYGD-ERIGQG 317 (366)
T ss_dssp EETTTEECHHHHHHH-HHHHTTSSEEETTEEESSS-SEEEES
T ss_pred EEeCCCcccchhHHH-HHHHhCeeeccCceeeECC-eEecch
Confidence 334443322334444 5568899998888764322 355533
No 350
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=34.36 E-value=2e+02 Score=23.99 Aligned_cols=101 Identities=14% Similarity=0.049 Sum_probs=51.1
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-- 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-- 160 (398)
+.....+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~~~~~~~~~ 104 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQEL-AGDLS----EAGAGTDLIERA 104 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEE-ECCTT----STTHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE-EecCC----CHHHHHHHHHHH
Confidence 3445566666665444455666677888888776543333222 223345555555 44422 3333333332
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 105 EAIAPVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2133566665543322222 246666666654
No 351
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=34.24 E-value=1.4e+02 Score=24.89 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=50.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCC-CCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP-YYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p-~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.++...=..+...|.+.|.+|++... .-.. ....++..|.++..+ ..|-. |.+.+++.++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI-KADIR----QVPEIVKLFDQAVA 92 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTT----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-EcCCC----CHHHHHHHHHHHHH
Confidence 345666655544445556667788988876422 2111 222334456666666 55432 5566665554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+....+.+. -.+.+++++..+
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2122566664433333332 246666666655
No 352
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=34.00 E-value=31 Score=32.14 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4788999999999999999999888
No 353
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=33.98 E-value=58 Score=29.15 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=42.8
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+..+++++..++-.|+.+|.+..+.+-+....... ....+ .+ ..+.+..++.+++++|.+.|+++|+-||-.
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEEEe
Confidence 4556778888877456666776654322111100000 00001 11 122345789999999999999999999854
No 354
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=33.74 E-value=1.2e+02 Score=21.67 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=32.0
Q ss_pred eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+.++|.. -...||+-+-..+.+++++.++.+.+.+++...+
T Consensus 59 vlvRpSG---TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~~~ 99 (112)
T 1wjw_A 59 AFVRPSG---TEDIVRVYAEANSQESADRLAYEVSLLVFQLAGG 99 (112)
T ss_dssp EEEECSS---SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCC---CccEEEEEEEECCHHHHHHHHHHHHHHHHHHHhh
Confidence 5667753 5678999887777888999999999999887543
No 355
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=33.60 E-value=98 Score=26.63 Aligned_cols=48 Identities=19% Similarity=0.287 Sum_probs=32.6
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-.+.+++.++.+. +.+++.+ +|. +.++.+++.+.|+++++.++-..+.
T Consensus 84 ~~~~v~ea~~~Gi--~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~ 131 (297)
T 2yv2_A 84 APDAVYEAVDAGI--RLVVVIT----EGI--PVHDTMRFVNYARQKGATIIGPNCP 131 (297)
T ss_dssp HHHHHHHHHHTTC--SEEEECC----CCC--CHHHHHHHHHHHHHHTCEEECSSSC
T ss_pred HHHHHHHHHHCCC--CEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCC
Confidence 3566777777654 6555432 332 5667889999999999987766644
No 356
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=33.49 E-value=1.4e+02 Score=27.90 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=26.3
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.+.+++.+.. ..++++. | |.-.+.+..+-+.+++++.+.++|+|..-
T Consensus 311 ~~~~~~~~~~---~davviG-p----Glg~~~~~~~~~~~~l~~~~~pvVlDadg 357 (502)
T 3rss_A 311 LQECLELSKD---VDVVAIG-P----GLGNNEHVREFVNEFLKTLEKPAVIDADA 357 (502)
T ss_dssp HHHHHHHHTT---CSEEEEC-T----TCCCSHHHHHHHHHHHHHCCSCEEECHHH
T ss_pred HHHHHHHhcc---CCEEEEe-C----CCCCCHHHHHHHHHHHHhcCCCEEEeCcc
Confidence 3444444432 4677765 2 33333333334444677789999999643
No 357
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=33.47 E-value=2e+02 Score=24.31 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=48.7
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
.....+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGY-VCDVT----DEDGIQAMVAQIE 106 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEE-ECCTT----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-EecCC----CHHHHHHHHHHHH
Confidence 334556666655444455666677788888775433211111 122334444444 44322 5566665554
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.++++++.+
T Consensus 107 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 107 SEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2222566665433222222 245566665544
No 358
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=33.40 E-value=2e+02 Score=23.59 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=47.9
Q ss_pred EEEecChHHHHHHHHHHhccC--CCEE--EEeCCCCcChhhHHHhcCcEEEEeccCCCCC-CCCChHHHHHhhccCCCCe
Q 015890 92 VMVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPK 166 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~--gd~V--l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~l~~~~~~~ 166 (398)
+++.+|+.+-...++..+.+. +-+| ++.++.-......++..|+.+..+.+.+-.. -..| +++.+.++... +.
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~-~D 103 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFD-AALAERLQAYG-VD 103 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHH-HHHHHHHHHTT-CS
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhcc-HHHHHHHHhcC-CC
Confidence 455566666667777777654 2233 3344332334567889999887662221110 0001 33445555443 68
Q ss_pred EEEEeCCCCCCccCCCHHHH
Q 015890 167 LVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l 186 (398)
++++.. .|.+++++.+
T Consensus 104 liv~ag----y~~IL~~~~l 119 (229)
T 3auf_A 104 LVCLAG----YMRLVRGPML 119 (229)
T ss_dssp EEEESS----CCSCCCHHHH
T ss_pred EEEEcC----hhHhCCHHHH
Confidence 888762 5778885554
No 359
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=33.15 E-value=87 Score=27.52 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=35.2
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.+++ ..+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+++|+
T Consensus 45 PF~~d-g~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEA-GRVDIEAFSALIARLDAAE-VDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTT-CCBCHHHHHHHHHHHHHHT-CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 3688888887766 222 4666655 233334567888888888876643 355554
No 360
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=33.03 E-value=32 Score=32.54 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-|+
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEee
Confidence 4788999999999999999999888
No 361
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=33.01 E-value=32 Score=32.57 Aligned_cols=25 Identities=12% Similarity=0.019 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4788999999999999999999888
No 362
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=32.86 E-value=1.9e+02 Score=23.22 Aligned_cols=96 Identities=13% Similarity=-0.012 Sum_probs=50.5
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhcc----C
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLET----K 162 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~ 162 (398)
.+++|.++...=..+...|.+.|.+|++..-......... +..|.++..+ ..|-. |.+.+++.++. .
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYH-HLDVS----KAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTT----CHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEE-EeccC----CHHHHHHHHHHHHHhc
Confidence 4566655544444556667778888877654432222222 2345566665 44422 66777776652 1
Q ss_pred CCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 163 PTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
..+..++-+....+.+. -.+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 22576665544333333 236666666554
No 363
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=32.83 E-value=84 Score=26.98 Aligned_cols=58 Identities=10% Similarity=-0.001 Sum_probs=36.5
Q ss_pred cCCCCCCCCChHHHHHhhc---c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.+++ ..+|.+.+++.++ + .. +..+++. .++--+..++.++..++.+.+.+. .+++|+
T Consensus 14 Pf~~d-g~iD~~~l~~lv~~li~~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 14 SFNED-GTINEKGLRQIIRHNIDKMK-VDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CBCTT-SCBCHHHHHHHHHHHHHTSC-CSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCC-CCcCHHHHHHHHHHHHhhCC-CcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44444 4789888888776 3 33 5777765 222234568888888888877642 355553
No 364
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=32.82 E-value=28 Score=32.40 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999888
No 365
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.77 E-value=29 Score=31.27 Aligned_cols=54 Identities=20% Similarity=0.106 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 245 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~ 245 (398)
.+++++|.++|+++|.-+++|=.- |..-|.. +++ .++=|.+|+.|+|+=+=...
T Consensus 73 ~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s-----~~d----l~~f~~lGi~gLRLD~Gf~~ 128 (385)
T 1x7f_A 73 VAEFKEIINHAKDNNMEVILDVAPAVFDQLGIS-----YSD----LSFFAELGADGIRLDVGFDG 128 (385)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEECTTCC-----------CCC----THHHHHHTCSEEEESSCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCC-----HHH----HHHHHHcCCCEEEEcCCCCH
Confidence 466999999999999999999433 2221111 111 13446678888887554444
No 366
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=32.65 E-value=83 Score=27.03 Aligned_cols=52 Identities=17% Similarity=0.091 Sum_probs=35.7
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
|.+++ ..+|.+.+++.++ +.. +..+++. .++--+..++.++..++.+.+.+.
T Consensus 14 Pf~~d-g~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTD-GTVDIDAMIAHARRCLSNG-CDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTT-SSBCHHHHHHHHHHHHHTT-CSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 44444 4789999888776 332 5777765 333344568999999999988764
No 367
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=32.54 E-value=1e+02 Score=26.79 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=46.2
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...+..-.++++.+ .++.. .-.+...++++.+ +-|++.-|- ..+.++.++|.++++++|+.+.+
T Consensus 55 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~~G---khVl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 55 YGSYEELAKDPNVEVAYV-GTQHP---QHKAAVMLCLAAG---KAVLCEKPM-----GVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp ESSHHHHHHCTTCCEEEE-CCCGG---GHHHHHHHHHHTT---CEEEEESSS-----SSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHhcC---CEEEEECCC-----CCCHHHHHHHHHHHHHhCCEEEE
Confidence 556667666666777777 44322 1345566666654 567777552 24577889999999999988877
Q ss_pred ee
Q 015890 203 DN 204 (398)
Q Consensus 203 De 204 (398)
--
T Consensus 123 ~~ 124 (334)
T 3ohs_X 123 AI 124 (334)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 368
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=32.47 E-value=45 Score=27.85 Aligned_cols=53 Identities=17% Similarity=0.324 Sum_probs=34.1
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCC----CccCCCHH---HHHHHHHHHHHcCCEEEEeece
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNP----SGTYIPER---LLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~np----tG~~~~~~---~l~~i~~l~~~~~~~livDe~~ 206 (398)
++.++++++.+ ++.|.+-..+.+ .|..-+.+ ..+++.++|+++++.+|+++-.
T Consensus 46 ~~~~~~al~~G--v~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAGG--VDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTT--CSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHCC--CCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 56677777754 478887766532 11111222 2477888999999999996544
No 369
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=32.34 E-value=34 Score=31.79 Aligned_cols=25 Identities=16% Similarity=0.462 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999887
No 370
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=32.25 E-value=91 Score=28.59 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=19.5
Q ss_pred CeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890 356 GHLRISFGG-LVEDDCKAAADRLRRGLE 382 (398)
Q Consensus 356 ~~iRi~~~~-~~~~~~~~~~~~l~~~~~ 382 (398)
..-||+-++ .+..|+.++++.+.+.-+
T Consensus 400 r~~ria~gsg~~~~~v~~ll~~~~~~~~ 427 (433)
T 3kl4_A 400 RMRRIAEGSGLEVEEVRELLEWYNNMNR 427 (433)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHH
Confidence 345777666 788899888888776543
No 371
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=32.15 E-value=1.3e+02 Score=26.39 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=43.0
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...+..-.++.+.+ -++.. .-.+....+++.+ +-|++.-| ...+.++.++|.++|+++|+.+.+
T Consensus 56 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khV~~EKP-----la~~~~e~~~l~~~a~~~g~~~~v 123 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVI-PTPND---THFPLAQSALAAG---KHVVVDKP-----FTVTLSQANALKEHADDAGLLLSV 123 (352)
T ss_dssp ESCHHHHHHCSSCCEEEE-CSCTT---THHHHHHHHHHTT---CEEEECSS-----CCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CcEEEECC-----CcCCHHHHHHHHHHHHHcCCeEEE
Confidence 455666666656777766 44322 1345566666654 55666644 224577788888888888888777
Q ss_pred e
Q 015890 203 D 203 (398)
Q Consensus 203 D 203 (398)
-
T Consensus 124 ~ 124 (352)
T 3kux_A 124 F 124 (352)
T ss_dssp C
T ss_pred E
Confidence 4
No 372
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=32.05 E-value=19 Score=30.15 Aligned_cols=61 Identities=15% Similarity=-0.003 Sum_probs=37.7
Q ss_pred CCEEEEeCCCCc--ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890 113 GDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (398)
Q Consensus 113 gd~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~ 174 (398)
|.+|+++.|... .+...++..|.+++.+ |.-+-....+.+.+++.+..-.....|++++++
T Consensus 6 g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~-P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~ 68 (254)
T 4es6_A 6 GWRLLLTRPDEECAALAASLGEAGVHSSSL-PLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKP 68 (254)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEEC-CSCEEEECCCCHHHHHHHHTGGGCSEEEECSHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEe-CCEEEeeCcChHHHHHHHHhccCCCEEEEECHH
Confidence 678999988653 4667788899999888 654322222334565555421224677776543
No 373
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=31.96 E-value=34 Score=31.98 Aligned_cols=25 Identities=8% Similarity=0.175 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4788999999999999999999887
No 374
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=31.95 E-value=21 Score=30.30 Aligned_cols=62 Identities=11% Similarity=-0.041 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCCc--ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890 112 AGDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (398)
Q Consensus 112 ~gd~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~ 174 (398)
.|.+|+++.|.-. .+...++..|++++.+ |.-+-....+.+.+.+.+..-.....|++++++
T Consensus 13 ~g~~IlvTRp~~~a~~l~~~L~~~G~~~~~~-P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESAALARVLADAGIFSSSL-PLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHTTTCEEEEC-CCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCCEEEc-CCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 3678999888763 3556778889998888 654322222444565555422224677776543
No 375
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=31.91 E-value=63 Score=27.81 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=31.9
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.+.++++++.+. +++++.+ +|. +.++.+++.+.|+++|+.++-..+.
T Consensus 84 ~~~v~ea~~~Gi--~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~ 130 (294)
T 2yv1_A 84 KDAVFEAIDAGI--ELIVVIT----EHI--PVHDTMEFVNYAEDVGVKIIGPNTP 130 (294)
T ss_dssp HHHHHHHHHTTC--SEEEECC----SCC--CHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHCCC--CEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCc
Confidence 566677776654 6555432 333 5667889999999999988766644
No 376
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=31.83 E-value=1.2e+02 Score=24.67 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=48.1
Q ss_pred EEEecChHHHHHHHHHHhccCCC--EE--EEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC----hHHHHHhhccCC
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGD--SV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD----ADWLEKTLETKP 163 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd--~V--l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d----~e~l~~~l~~~~ 163 (398)
+++.+|+.+-...++..+.+.+- +| ++.++.-......++..|+.+..+.+.+ +. + -+++.+.++...
T Consensus 5 ~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~---~~-~r~~~~~~~~~~l~~~~ 80 (216)
T 2ywr_A 5 GVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKE---FP-SKKEFEERMALELKKKG 80 (216)
T ss_dssp EEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGG---SS-SHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccc---cc-chhhhhHHHHHHHHhcC
Confidence 44555655666667777765542 33 3444433445567888999887662221 11 2 123445555443
Q ss_pred CCeEEEEeCCCCCCccCCCHHHH
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l 186 (398)
+.++++.. .|.+++++.+
T Consensus 81 -~Dliv~a~----y~~il~~~~l 98 (216)
T 2ywr_A 81 -VELVVLAG----FMRILSHNFL 98 (216)
T ss_dssp -CCEEEESS----CCSCCCHHHH
T ss_pred -CCEEEEeC----chhhCCHHHH
Confidence 68887762 4678885544
No 377
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=31.74 E-value=61 Score=31.00 Aligned_cols=102 Identities=9% Similarity=0.034 Sum_probs=58.4
Q ss_pred cEEEecChHHHHHHHHHHhcc-----C-CC-------EEEEeCCCCc-------------C------hhhHHHhcCcEEE
Q 015890 91 SVMVTAGANQAFVNIVLTLCD-----A-GD-------SVVMFAPYYF-------------N------SYMSFQMTGVTHI 138 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~-----~-gd-------~Vl~~~p~~~-------------~------~~~~~~~~g~~~~ 138 (398)
.|.++.++..+++..+++|.+ . +. ..|...|-|. + +...+..+++++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 367777777788877777642 1 11 1233444441 1 1233445566666
Q ss_pred EeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 139 ~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
.++..|+.+|.+..+..-++-+.+. ...+..++.+++++|.+.|+++|+-||-.
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~Ga-----------~~~~~~YT~~di~eiv~yA~~rgI~VIPE 275 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFGA-----------LSPQKVYTKAAIREVVRFGLERGVRVLPE 275 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHHS-----------SSSSSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeecCcCceeccccCcchhccCC-----------cCCCCCcCHHHHHHHHHHHHHhCCceeee
Confidence 6544555566554333222211110 11345789999999999999999988854
No 378
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=31.72 E-value=2.3e+02 Score=23.71 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=53.0
Q ss_pred CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--
Q 015890 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-- 160 (398)
Q Consensus 86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-- 160 (398)
......+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~----d~~~v~~~~~~~ 103 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPI-RCDVT----QPDQVRGMLDQM 103 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEE-ECCTT----CHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-EcCCC----CHHHHHHHHHHH
Confidence 3445567777666544455666677888888776544333222 223345455555 44322 5566666554
Q ss_pred --cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 --TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 --~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.++++++.+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1122577665543322222 246666666554
No 379
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=31.62 E-value=1.2e+02 Score=26.38 Aligned_cols=76 Identities=7% Similarity=-0.029 Sum_probs=45.3
Q ss_pred CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (398)
Q Consensus 113 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i 189 (398)
+..+++..+.| .-.++.+|++.+.+ .....+..+++.+|.+.++ ++. +++|+.....+ ....+.|
T Consensus 197 ~~~~v~~H~af---~Yfa~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~If~e~~~~-------~~~~~~l 264 (313)
T 1toa_A 197 RRVLVTAHDAF---GYFSRAYGFEVKGL-QGVSTASEASAHDMQELAAFIAQRK-LPAIFIESSIP-------HKNVEAL 264 (313)
T ss_dssp GCEEEEEESCC---HHHHHHHTCEEEEE-ECSSCSSCCCHHHHHHHHHHHHHTT-CSEEEEETTSC-------THHHHHH
T ss_pred CCEEEEECCcH---HHHHHHCCCeEEEe-eccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCC-------hHHHHHH
Confidence 56777776654 33468899988776 3322334566666666554 444 68888773322 2335666
Q ss_pred HHH--HHHcCCEE
Q 015890 190 SDL--CKAAGSWL 200 (398)
Q Consensus 190 ~~l--~~~~~~~l 200 (398)
++. |++.|+.+
T Consensus 265 a~~~~A~e~gv~v 277 (313)
T 1toa_A 265 RDAVQARGHVVQI 277 (313)
T ss_dssp HHHHHTTTCCCEE
T ss_pred HccchhhhcCCce
Confidence 643 36777764
No 380
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.43 E-value=87 Score=27.65 Aligned_cols=57 Identities=5% Similarity=-0.084 Sum_probs=34.8
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLV 201 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li 201 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+.+|
T Consensus 42 PF~~dg-~ID~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 104 (343)
T 2v9d_A 42 IFTADG-QLDKPGTAALIDDLIKAG-VDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDRRVPVL 104 (343)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTT-CSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 444443 688888888776 222 4666654 333344567888888888876643 34554
No 381
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=31.32 E-value=1.7e+02 Score=25.66 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=44.1
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+.+.+....++++.+ -++.. ...+.+..+++.+ +-|++.-|- ..+.++.+++.++++++|+.+.+
T Consensus 55 ~~~~~~~l~~~~~D~V~i-~tp~~---~h~~~~~~al~~g---k~vl~EKP~-----~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 55 DATMEALLAREDVEMVII-TVPND---KHAEVIEQCARSG---KHIYVEKPI-----SVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp CSSHHHHHHCSSCCEEEE-CSCTT---SHHHHHHHHHHTT---CEEEEESSS-----CSSHHHHHHHHHHHHHHCCCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHcC---CEEEEccCC-----CCCHHHHHHHHHHHHHcCCeEEE
Confidence 555666665556666666 33322 1345555666544 556666442 23567788888888888888877
Q ss_pred eece
Q 015890 203 DNTY 206 (398)
Q Consensus 203 De~~ 206 (398)
.-.+
T Consensus 123 ~~~~ 126 (354)
T 3db2_A 123 GHSS 126 (354)
T ss_dssp ECGG
T ss_pred eech
Confidence 6444
No 382
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=31.26 E-value=33 Score=32.03 Aligned_cols=25 Identities=36% Similarity=0.413 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4788999999999999999999888
No 383
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.25 E-value=2.2e+02 Score=23.81 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=49.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC--------Cc--C------hhhHHHhcCcEEEEeccCCCCCCCCCh
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY--------YF--N------SYMSFQMTGVTHILVGPCSSKTLHPDA 152 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~--------~~--~------~~~~~~~~g~~~~~~~~~~~~~~~~d~ 152 (398)
...+++|.++...=..+...|.+.|.+|++..-. |. . ....++..|.++..+ ..|-. |.
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~ 89 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTR-VLDVR----DD 89 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEE-ECCTT----CH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE-EcCCC----CH
Confidence 4456666655444455666677888888775321 10 0 112233445566555 44422 55
Q ss_pred HHHHHhhc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 153 DWLEKTLE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 153 e~l~~~l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+.+++.++ ....+.+++-+......+. -.+.++++++.+
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 66665554 1122566665533333332 246666666554
No 384
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=31.21 E-value=75 Score=27.00 Aligned_cols=73 Identities=16% Similarity=0.083 Sum_probs=41.7
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 191 (398)
+|++|.+. +|++....++..+.++.-+ +.++.......++-+..+.. +.+|+++ |..+-...+++|.+
T Consensus 140 ~g~kV~vI--G~fP~i~~~~~~~~~l~V~-E~~p~~g~~p~~~~~~~lp~---~D~viiT------gstlvN~Tl~~lL~ 207 (270)
T 3l5o_A 140 KGKKVGVV--GHFPHLESLLEPICDLSIL-EWSPEEGDYPLPASEFILPE---CDYVYIT------CASVVDKTLPRLLE 207 (270)
T ss_dssp TTSEEEEE--SCCTTHHHHHTTTSEEEEE-ESSCCTTCEEGGGHHHHGGG---CSEEEEE------THHHHHTCHHHHHH
T ss_pred CCCEEEEE--CCchhHHHHHhcCCCEEEE-ECCCCCCCCChhHHHHhhcc---CCEEEEE------eehhhcCCHHHHHh
Confidence 46788777 4556666666667776666 55443322222333444443 4777775 33222222999999
Q ss_pred HHHHc
Q 015890 192 LCKAA 196 (398)
Q Consensus 192 l~~~~ 196 (398)
+|+..
T Consensus 208 ~~~~a 212 (270)
T 3l5o_A 208 LSRNA 212 (270)
T ss_dssp HTTTS
T ss_pred hCCCC
Confidence 99753
No 385
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=31.11 E-value=2.3e+02 Score=23.64 Aligned_cols=165 Identities=9% Similarity=0.046 Sum_probs=90.3
Q ss_pred HHHHHHH-HHHcCCCeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 18 IMVQIQE-LVRGAKNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 18 ~~~~~~~-~~~~g~~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
.+.++.+ +.+.|-+++.++....+ ...=|.+.++..+++.++. ....+-+.+.+. .. ...-++++
T Consensus 29 ~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~--------~~~~~~~~~~~~----r~-~~Pivlm~ 95 (252)
T 3tha_A 29 TSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGV--------DIHSVFELLARI----KT-KKALVFMV 95 (252)
T ss_dssp HHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTC--------CHHHHHHHHHHC----CC-SSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCC--------CHHHHHHHHHHH----hc-CCCEEEEe
Confidence 3444333 34578999999976533 3334677777777776631 113333333332 11 11224444
Q ss_pred cCh---HHHHHHHHHHhccCC-CEEEEeCCCC---cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 96 AGA---NQAFVNIVLTLCDAG-DSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 96 ~g~---t~a~~~~~~~l~~~g-d~Vl~~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
--- .-+++..+..+...| |.+++++--+ ..+...++..|++.+.+ -.+.. +.+.+++..+... ..|
T Consensus 96 Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~l-vaP~t----~~eRi~~ia~~a~--gFi 168 (252)
T 3tha_A 96 YYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITL-VSVTT----PKERVKKLVKHAK--GFI 168 (252)
T ss_dssp CHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEE-EETTS----CHHHHHHHHTTCC--SCE
T ss_pred ccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEE-eCCCC----cHHHHHHHHHhCC--CeE
Confidence 211 123444555555566 8888887554 23566788899987775 22211 4567777666544 566
Q ss_pred EEeCCCCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015890 169 SVVNPGNPSGTYIP-ERLLKRISDLCKAA-GSWLVV 202 (398)
Q Consensus 169 ~i~~p~nptG~~~~-~~~l~~i~~l~~~~-~~~liv 202 (398)
++.+-..-||.-.. .+.+.++.+.++++ +.++++
T Consensus 169 Y~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 169 YLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp EEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 76654456776532 23456666666654 445444
No 386
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=31.05 E-value=1.5e+02 Score=24.01 Aligned_cols=89 Identities=8% Similarity=0.116 Sum_probs=47.8
Q ss_pred EEEecChHHHHHHHHHHhccC--CCEE--EEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhccCCCCe
Q 015890 92 VMVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPK 166 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~--gd~V--l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~ 166 (398)
.++.+|+...+..++..+... +-+| ++.++.-......++..|+.+..+.+.+... ..+ -+++.+.++... +.
T Consensus 4 aVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~-r~~~~~~~~~~l~~~~-~D 81 (209)
T 1meo_A 4 AVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKN-RVEFDSAIDLVLEEFS-ID 81 (209)
T ss_dssp EEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSS-HHHHHHHHHHHHHHTT-CC
T ss_pred EEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCc-hhhhhHHHHHHHHhcC-CC
Confidence 345555556677777665433 2233 3445543344567888999887662221110 001 123455555443 68
Q ss_pred EEEEeCCCCCCccCCCHHHH
Q 015890 167 LVSVVNPGNPSGTYIPERLL 186 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l 186 (398)
++++.. .|.+++++.+
T Consensus 82 liv~a~----y~~il~~~~l 97 (209)
T 1meo_A 82 IVCLAG----FMRILSGPFV 97 (209)
T ss_dssp EEEEES----CCSCCCHHHH
T ss_pred EEEEcc----hhhhCCHHHH
Confidence 887763 4678885544
No 387
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=30.92 E-value=1.5e+02 Score=25.97 Aligned_cols=71 Identities=13% Similarity=0.091 Sum_probs=44.2
Q ss_pred ccCCCEEEEeCCCCcCh----------hhHHHhcCcEEEEeccCC-CC-CC--CCC---hHHHHHhhccCCCCeEEEEeC
Q 015890 110 CDAGDSVVMFAPYYFNS----------YMSFQMTGVTHILVGPCS-SK-TL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (398)
Q Consensus 110 ~~~gd~Vl~~~p~~~~~----------~~~~~~~g~~~~~~~~~~-~~-~~--~~d---~e~l~~~l~~~~~~~~v~i~~ 172 (398)
+++||+|-+..|+.... ...++..|++++.- +.- .. ++ .-| +++|.+++.... +++|+...
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~-i~aI~~~r 87 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEG-SLTGRYDYYRSGSIQERAKELNALIRNPN-VSCIMSTI 87 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHCTT-EEEEEESC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEc-ccccccccccCCCHHHHHHHHHHHhhCCC-CCEEEEcc
Confidence 57899999999987431 13457789998875 322 11 11 112 556666666443 79988876
Q ss_pred CCCCCccCCC
Q 015890 173 PGNPSGTYIP 182 (398)
Q Consensus 173 p~nptG~~~~ 182 (398)
...-+-.+++
T Consensus 88 GG~g~~rlL~ 97 (336)
T 3sr3_A 88 GGMNSNSLLP 97 (336)
T ss_dssp CCSCGGGGGG
T ss_pred ccccHHHHhh
Confidence 6555555554
No 388
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=30.64 E-value=2.4e+02 Score=23.71 Aligned_cols=100 Identities=17% Similarity=0.096 Sum_probs=50.0
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~ 163 (398)
.|+++.++...=..++..|.+.|.+|.+..-.-.. -.. .+...|++++.. |- -|.+.+++.++.
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~---D~----~d~~~l~~~~~~-- 76 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA---SL----DDHQRLVDALKQ-- 76 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECC---CS----SCHHHHHHHHTT--
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeC---CC----CCHHHHHHHHhC--
Confidence 46666543333334555666667666554322111 111 122345555433 21 267888888874
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEE
Q 015890 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVV 202 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~liv 202 (398)
+.+|+...+....+. .......+++.|++.| +.-++
T Consensus 77 -~d~vi~~a~~~~~~~--~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 77 -VDVVISALAGGVLSH--HILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp -CSEEEECCCCSSSST--TTTTHHHHHHHHHHSCCCSEEE
T ss_pred -CCEEEECCccccchh--hHHHHHHHHHHHHhcCCCceEE
Confidence 466665533221111 1122577888888887 54333
No 389
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=30.62 E-value=71 Score=28.25 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=34.8
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|.+++ ..+|.+.+++.++ +.. +..+++. .++--+..++.++..++++.+....+.+|+
T Consensus 37 PF~~d-g~ID~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 37 PCRQD-RTPDFDALVRKGKELIADG-MSAVVYC-GSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp CBCTT-SSBCHHHHHHHHHHHHHTT-CCCEEES-SGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEeC-ccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 44444 4788888888776 222 4666654 222233467888888888874333455554
No 390
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=30.56 E-value=76 Score=27.87 Aligned_cols=32 Identities=25% Similarity=0.098 Sum_probs=27.8
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
-.+|.|...+.+++.++++.|+++|+.+++|=
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 36677888888889999999999999999993
No 391
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=30.52 E-value=85 Score=29.90 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=49.8
Q ss_pred cCCCEEEEeCCCCcChh-------hHHHhcCcEEEEecc---CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890 111 DAGDSVVMFAPYYFNSY-------MSFQMTGVTHILVGP---CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~~-------~~~~~~g~~~~~~~~---~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~ 180 (398)
+++|.|++.....++.. ......|++++.. . ..-+ .+.|.++|...++.-. |+-++..+..
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~-~~~~i~~S-gHa~~~eL~~~i~~~~-Pk~vipvHGe------ 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYP-PTYKVHAS-GHASQEELKLILNLTT-PRFFLPWHGE------ 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECT-TTSSSCCC-SSCCHHHHHHHHHHHC-CSEEEEESBC------
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEc-cCCceEEe-CCCCHHHHHHHHHhcC-CCEEEEEcCC------
Confidence 67899998877666642 2345668887754 2 1122 3568899998887433 5777766532
Q ss_pred CCHHHHHHHHHHHHHcCC
Q 015890 181 IPERLLKRISDLCKAAGS 198 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~ 198 (398)
...+.++++++++.|+
T Consensus 408 --~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 --VRHQMNFKWLAESMSR 423 (562)
T ss_dssp --HHHHHHHHHHHHTSSS
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 2347777788887765
No 392
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=30.44 E-value=2e+02 Score=22.72 Aligned_cols=93 Identities=9% Similarity=-0.022 Sum_probs=47.5
Q ss_pred EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEE
Q 015890 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSV 170 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i 170 (398)
|++|.++...=..+...|.+.|.+|.+..-.-..... ..+++++.. +. -| .+.+++.++. +.+|+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~-D~------~d~~~~~~~~~~~---~d~vi~ 69 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHF-DV------DWTPEEMAKQLHG---MDAIIN 69 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEEC-CT------TSCHHHHHTTTTT---CSEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEe-cc------cCCHHHHHHHHcC---CCEEEE
Confidence 5666544444455666777778777765433211111 134444443 22 15 7788888873 466665
Q ss_pred eCCCCC-CccCCCHHHHHHHHHHHHHcC
Q 015890 171 VNPGNP-SGTYIPERLLKRISDLCKAAG 197 (398)
Q Consensus 171 ~~p~np-tG~~~~~~~l~~i~~l~~~~~ 197 (398)
+..... .-.-.+..-...+++.|++.+
T Consensus 70 ~ag~~~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 70 VSGSGGKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp CCCCTTSSCCCCCCHHHHHHHHHHHHTT
T ss_pred CCcCCCCCcEeEeHHHHHHHHHHHHHhC
Confidence 533221 111223333556677676543
No 393
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.39 E-value=2.4e+02 Score=23.63 Aligned_cols=99 Identities=10% Similarity=-0.048 Sum_probs=50.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
....+++|.++...=..+...|.+.|-+|++..-.-....... +..|.++..+ ..|-. |.+.+++.++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIAL-EADVS----DELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EccCC----CHHHHHHHHHHHHH
Confidence 3455666665544445556667788888877654432222222 2335556555 44422 5566665554
Q ss_pred cCCCCeEEEEeCCCC-CCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGN-PSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~n-ptG~--~~~~~~l~~i~~ 191 (398)
....+..++-+.... +.+. -.+.+++++..+
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 112256666553322 1122 346666666554
No 394
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.24 E-value=66 Score=28.02 Aligned_cols=58 Identities=10% Similarity=0.057 Sum_probs=35.2
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+++|+
T Consensus 34 Pf~~dg-~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQG-RLDWDSLAKLVDFHLQEG-TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHHT-CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 444443 688888888766 222 4666654 233334567888888888876543 345554
No 395
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=30.24 E-value=32 Score=23.28 Aligned_cols=21 Identities=14% Similarity=0.026 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEeece
Q 015890 186 LKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 186 l~~i~~l~~~~~~~livDe~~ 206 (398)
-.+|.++++++|++++.|..-
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 789999999999999999543
No 396
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=30.22 E-value=2.3e+02 Score=23.31 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=50.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---- 161 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---- 161 (398)
...+++|.++...=..+...|.+.|.+|++..-....... .+...|.++..+ ..|-. |.+.+++.++.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH-ACDLS----HSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEE-ECCTT----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEE-EecCC----CHHHHHHHHHHHHHh
Confidence 4456666555444445556677788888776543322222 223446666655 44422 55666655542
Q ss_pred CCCCeEEEEeCCC-CCCcc--CCCHHHHHHHHH
Q 015890 162 KPTPKLVSVVNPG-NPSGT--YIPERLLKRISD 191 (398)
Q Consensus 162 ~~~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 191 (398)
...+.+++-+... .+.+. ..+.++++++.+
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 1225776655432 22222 246666665554
No 397
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=30.17 E-value=1.7e+02 Score=25.32 Aligned_cols=111 Identities=11% Similarity=0.155 Sum_probs=60.0
Q ss_pred CcHHHHHHHHHHHhhhcCC--------CCCc-EEEecChHHHHHHHHHHhccCC--CEEEEeCCCCcChhhHHHhcCcEE
Q 015890 69 GLPELRDALVKKLNQENKL--------YKSS-VMVTAGANQAFVNIVLTLCDAG--DSVVMFAPYYFNSYMSFQMTGVTH 137 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~--------~~~~-v~~~~g~t~a~~~~~~~l~~~g--d~Vl~~~p~~~~~~~~~~~~g~~~ 137 (398)
...++++.+...-. .+++ .+.. +++.+|....+..++....... -+|.+--..++.....++..|+.+
T Consensus 78 ~~~~L~~~l~~la~-~l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~ 156 (302)
T 3o1l_A 78 DLDGFREAFTPIAE-EFSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPY 156 (302)
T ss_dssp CHHHHHHHHHHHHH-HHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCE
T ss_pred CHHHHHHHHHHHHH-HhCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCE
Confidence 45678888866433 3332 1223 4555666566677776654321 133322223344556788999988
Q ss_pred EEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 138 ILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 138 ~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
..+ +..... ... -+++.+.++... +.++++.. .+.+++++.++
T Consensus 157 ~~~-~~~~~~-r~~~~~~~~~~l~~~~-~DliVlag----ym~IL~~~~l~ 200 (302)
T 3o1l_A 157 YHV-PVDPKD-KEPAFAEVSRLVGHHQ-ADVVVLAR----YMQILPPQLCR 200 (302)
T ss_dssp EEC-CCCSSC-CHHHHHHHHHHHHHTT-CSEEEESS----CCSCCCTTHHH
T ss_pred EEc-CCCcCC-HHHHHHHHHHHHHHhC-CCEEEHhH----hhhhcCHHHHh
Confidence 777 443211 111 134556666544 68888762 46677755443
No 398
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.17 E-value=2.2e+02 Score=23.59 Aligned_cols=97 Identities=13% Similarity=0.025 Sum_probs=47.2
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++. ...+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV-VADVS----DPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEE-ECCTT----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEE-EcCCC----CHHHHHHHHHHHHHHcCCC
Confidence 456666555444445666677788888776433222333334443344444 44322 55666655541 1225
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++-+......+. -.+.++++++.+
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66665433222222 235555555544
No 399
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.15 E-value=88 Score=26.85 Aligned_cols=52 Identities=13% Similarity=-0.013 Sum_probs=34.0
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
|.+++ ..+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+.
T Consensus 10 Pf~~d-g~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKD-NRIDKEKLKIHAENLIRKG-IDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTT-SSBCHHHHHHHHHHHHHTT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 44444 4788888888776 232 5676655 333344568888888888887754
No 400
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.07 E-value=92 Score=24.87 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=32.5
Q ss_pred ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
+.++|+++++.. +..+++- +|.+.. ++++++.++++|-.+++
T Consensus 18 ~~~~l~~al~s~--~~~ifll-----~g~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILELD--LTYMVML-----ETHVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTSS--CCEEEEC-----SEETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCC--CCEEEEe-----cCcHHH---HHHHHHHHHHcCCeEEE
Confidence 678899998854 3777775 466666 99999999999876665
No 401
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=30.00 E-value=2.5e+02 Score=23.71 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=50.5
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC------------cC---hhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY------------FN---SYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~------------~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
...+++|.++...=..+...|.+.|.+|++..-.- .. ....++..|.++..+ ..|-. |.+
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~ 102 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIAS-QVDVR----DFD 102 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEE-ECCCC----CHH
Confidence 44566666554444455666778898887753220 01 112234456666666 55432 556
Q ss_pred HHHHhhc----cCCCCeEEEEeCCCCCCcc---CCCHHHHHHHHH
Q 015890 154 WLEKTLE----TKPTPKLVSVVNPGNPSGT---YIPERLLKRISD 191 (398)
Q Consensus 154 ~l~~~l~----~~~~~~~v~i~~p~nptG~---~~~~~~l~~i~~ 191 (398)
.+++.++ ....+.+++-+......+. -.+.+++++..+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 6666554 2122566665543222222 246666666655
No 402
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.97 E-value=2.2e+02 Score=24.38 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=50.3
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC-------Cc-----C---hhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY-------YF-----N---SYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~-------~~-----~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e 153 (398)
...+++|.++...=..+...|.+.|.+|++..-. +. . ....++..|.++..+ ..|-. |.+
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~ 120 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIAR-QADVR----DLA 120 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEE-ECCCC----CHH
Confidence 3456666555444455666677889888775322 10 0 112233456666666 55422 556
Q ss_pred HHHHhhc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 154 WLEKTLE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 154 ~l~~~l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++.++ ....+.+++-+......+. -.+.++++++.+
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6666554 1122566665543333332 346666666654
No 403
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=29.52 E-value=2.4e+02 Score=23.28 Aligned_cols=101 Identities=17% Similarity=0.034 Sum_probs=51.0
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH---h-cCc-EEEEeccCCCCCCCCChHHHHHhhc-
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ---M-TGV-THILVGPCSSKTLHPDADWLEKTLE- 160 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~-~g~-~~~~~~~~~~~~~~~d~e~l~~~l~- 160 (398)
.....+++|.++...=..+...|.+.|.+|++..-.-.......+ . .+. ++..+ ..|-. |.+.+++.++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS-VCDVL----DALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEE-ECCTT----CHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEE-eCCCC----CHHHHHHHHHH
Confidence 334556666665444455666677888888776543322222221 1 332 35555 44422 5555555544
Q ss_pred ---cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 161 ---TKPTPKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 161 ---~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
....+.+++-+....+.+. -.+.+++++..+.
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 1122566665543333333 3566666666553
No 404
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=29.51 E-value=1.3e+02 Score=26.61 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=46.4
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...+....++++.+ -++.. .-.+....+++.+ +-|++.-|- ..+.++.++|.++|+++|+.+.+
T Consensus 54 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~e~~~l~~~a~~~g~~~~v 121 (358)
T 3gdo_A 54 VHELEEITNDPAIELVIV-TTPSG---LHYEHTMACIQAG---KHVVMEKPM-----TATAEEGETLKRAADEKGVLLSV 121 (358)
T ss_dssp ESSTHHHHTCTTCCEEEE-CSCTT---THHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-cCCcH---HHHHHHHHHHHcC---CeEEEecCC-----cCCHHHHHHHHHHHHHcCCeEEE
Confidence 455666666556777776 44322 1355666666654 566766552 24577899999999999988887
Q ss_pred eec
Q 015890 203 DNT 205 (398)
Q Consensus 203 De~ 205 (398)
--.
T Consensus 122 ~~~ 124 (358)
T 3gdo_A 122 YHN 124 (358)
T ss_dssp ECG
T ss_pred eee
Confidence 543
No 405
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.46 E-value=73 Score=27.75 Aligned_cols=68 Identities=9% Similarity=0.017 Sum_probs=39.9
Q ss_pred hcCcEEEEeccCCC-CCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 132 MTGVTHILVGPCSS-KTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 132 ~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
..|+-+-.+-|.++ + ..+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+++|+
T Consensus 12 ~~Gv~~a~vTPf~~~d-g~iD~~~l~~lv~~li~~G-v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 12 LETISGIPITPFRKSD-GSIDWHHYKETVDRIVDNG-IDVIVPC-GNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp TSSEEECCCCCBCTTT-CCBCHHHHHHHHHHHHTTT-CCEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCceEEeeeCCccCCC-CCCCHHHHHHHHHHHHHcC-CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34543333335555 4 4789888888776 222 5666654 222233467888888888877553 356654
No 406
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=29.38 E-value=31 Score=31.47 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.+|+|-|+
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4788999999999999999999888
No 407
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=29.31 E-value=74 Score=27.46 Aligned_cols=53 Identities=6% Similarity=-0.004 Sum_probs=35.1
Q ss_pred CCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEE
Q 015890 148 LHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVV 202 (398)
Q Consensus 148 ~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~----~~~liv 202 (398)
..+|.+.+++.++ ... +..+++. .++--+..++.++.+++.+.+.+. ++++|+
T Consensus 23 g~iD~~~l~~lv~~li~~G-v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENG-IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TEECHHHHHHHHHHHHHTT-CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4689888888776 222 5777655 333344568888888888887653 366665
No 408
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=29.24 E-value=1.1e+02 Score=26.15 Aligned_cols=73 Identities=14% Similarity=0.106 Sum_probs=42.7
Q ss_pred CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (398)
Q Consensus 114 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 190 (398)
..+++..+.| .-.++.+|++...+ .....+..+++.+|.+.++ ++. +++|+.....++ ..++
T Consensus 184 ~~~v~~H~af---~Yf~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~~~~~-------~~~~--- 248 (294)
T 3hh8_A 184 KLIVTSEGCF---KYFSKAYGVPSAYI-WEINTEEEGTPDQISSLIEKLKVIK-PSALFVESSVDR-------RPME--- 248 (294)
T ss_dssp CCEEEEESCC---HHHHHHHTCCEEEE-ESSCCSCCCCHHHHHHHHHHHHHSC-CSCEEEETTSCS-------HHHH---
T ss_pred cEEEEECChH---HHHHHHcCCceeec-cccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCCc-------HHHH---
Confidence 5577666654 33467899987776 3322334566666666554 444 678887743322 2233
Q ss_pred HHHHHcCCEEE
Q 015890 191 DLCKAAGSWLV 201 (398)
Q Consensus 191 ~l~~~~~~~li 201 (398)
.++++.|+.++
T Consensus 249 ~ia~~~g~~v~ 259 (294)
T 3hh8_A 249 TVSKDSGIPIY 259 (294)
T ss_dssp HHHHHHCCCEE
T ss_pred HHHHHhCCcEE
Confidence 34667887765
No 409
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=29.22 E-value=92 Score=24.73 Aligned_cols=89 Identities=10% Similarity=0.154 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|+++.. +..+...|.+|++..|.-.. ....+...|...... +.. +.+++.+.+... ..+|+|...+.
T Consensus 23 T~ll~~-a~r~~~~g~kV~v~k~~~d~r~~~~~i~s~~g~~~~a~-~~~------~~~~i~~~~~~~--~dvViIDEaqf 92 (191)
T 1xx6_A 23 EELIRR-IRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAV-AIK------NSREILKYFEED--TEVIAIDEVQF 92 (191)
T ss_dssp HHHHHH-HHHHHHTTCCEEEEEEC-------CEEECTTSCEEECE-EES------SSTHHHHHCCTT--CSEEEECSGGG
T ss_pred HHHHHH-HHHHHHCCCEEEEEEeccCccchHHHHHhhcCCceeeE-eeC------CHHHHHHHHhcc--CCEEEEECCCC
Confidence 444444 44444567788887655422 111222334433222 221 123444444432 47888885444
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
++++.++.+.+++.. |+.+|+=
T Consensus 93 -----l~~~~v~~l~~l~~~-~~~Vi~~ 114 (191)
T 1xx6_A 93 -----FDDEIVEIVNKIAES-GRRVICA 114 (191)
T ss_dssp -----SCTHHHHHHHHHHHT-TCEEEEE
T ss_pred -----CCHHHHHHHHHHHhC-CCEEEEE
Confidence 666667777777665 8888873
No 410
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=29.19 E-value=43 Score=30.85 Aligned_cols=29 Identities=17% Similarity=0.329 Sum_probs=25.3
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 175 NPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
++.|..++.+++++|++.|+++|+-||-.
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIPE 114 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIPA 114 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeeee
Confidence 45677899999999999999999999843
No 411
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.18 E-value=2.3e+02 Score=23.07 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=49.2
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC-cC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----c
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~-~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~ 161 (398)
..+++|.++...=..+...|.+.|.+|++....- .. ....++..|.++..+ ..|-. |.+.+++.++ .
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANVA----DADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEE-ECCTT----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-EccCC----CHHHHHHHHHHHHHH
Confidence 3456665554444455666778888887643221 11 122334456666666 44422 5566665554 1
Q ss_pred CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 162 KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
...+..++-+....+.+. -.+.+++++..+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 122566665543332222 246666666554
No 412
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=29.10 E-value=1.4e+02 Score=26.25 Aligned_cols=71 Identities=18% Similarity=0.198 Sum_probs=43.0
Q ss_pred CCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.|..+...+....++++.+ -++.. .-.+...++++.+ +-|++.-|- ..+.++.+++.++|+++|+.+.
T Consensus 53 ~~~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---khVl~EKP~-----a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 53 IYESYEAVLADEKVDAVLI-ATPND---SHKELAISALEAG---KHVVCEKPV-----TMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp BCSCHHHHHHCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHHTCCEE
T ss_pred eeCCHHHHhcCCCCCEEEE-cCCcH---HHHHHHHHHHHCC---CCEEeeCCC-----cCCHHHHHHHHHHHHHhCCeEE
Confidence 4556666666556666666 33321 1345555666543 556666442 2357778888888888888777
Q ss_pred Eee
Q 015890 202 VDN 204 (398)
Q Consensus 202 vDe 204 (398)
+--
T Consensus 121 v~~ 123 (359)
T 3e18_A 121 VHQ 123 (359)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 413
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=29.09 E-value=39 Score=30.93 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-++
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4788999999999999999999887
No 414
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=29.06 E-value=55 Score=22.84 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=35.0
Q ss_pred CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEE-EEeece
Q 015890 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWL-VVDNTY 206 (398)
Q Consensus 149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~l~~~~~~~l-ivDe~~ 206 (398)
..+.+.|++.+++.. +..+++.-|-|.-|..-+. +..++.++..++.++.+ .+||-+
T Consensus 37 ~~~~~~l~~li~e~~-v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERl 95 (98)
T 1iv0_A 37 EEDVEALLDFVRREG-LGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERF 95 (98)
T ss_dssp HHHHHHHHHHHHHHT-CCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHHcC-CCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 346788999888765 7899999887776665331 12344444333325554 477643
No 415
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=28.78 E-value=88 Score=27.22 Aligned_cols=58 Identities=22% Similarity=0.160 Sum_probs=37.9
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.+++ ..+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. ++.+|+
T Consensus 33 Pf~~d-g~iD~~~l~~li~~li~~G-v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDN-GAIDEKAFCNFVEWQITQG-INGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTT-SCBCHHHHHHHHHHHHHTT-CSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 4789999888876 332 5777755 333344568889999998887653 355554
No 416
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=28.63 E-value=2.4e+02 Score=22.98 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=48.5
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH---HHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TK 162 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~ 162 (398)
..+++|.++...=..+...|.+.|.+|++..-.-...... ++..|.++..+ ..|-. |.+.+++.++ ..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL-ELDVA----DRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHHHHHHc
Confidence 4566666554444556666777888887654332122221 22235555555 44422 5566665554 11
Q ss_pred CCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 163 PTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 163 ~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
..+.+++-+....+.+. -.+.++++++.+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 22566665533333332 246566665554
No 417
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=28.56 E-value=78 Score=27.11 Aligned_cols=47 Identities=11% Similarity=-0.020 Sum_probs=27.7
Q ss_pred CCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 148 LHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 148 ~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
..+|.+.+++.++ +.. +..+++. .++--+..++.++..++.+.+.+.
T Consensus 15 g~iD~~~l~~lv~~li~~G-v~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKG-IDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTT-CCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3677777777665 222 4666654 223334457777777777776643
No 418
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=28.55 E-value=42 Score=32.26 Aligned_cols=25 Identities=24% Similarity=0.530 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4789999999999999999999988
No 419
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=28.39 E-value=2.6e+02 Score=23.68 Aligned_cols=110 Identities=8% Similarity=-0.032 Sum_probs=64.2
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh
Q 015890 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA 152 (398)
Q Consensus 73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 152 (398)
+++.+.-+- ..+|.+.+|+| ++..++.+| .+..|...++.+|++.+.+ .. ....++.
T Consensus 82 l~ekI~l~~-------~~gV~v~~GGT-----lfE~~l~qg--------~~~~yl~~~k~lGF~~IEI-Sd--Gti~l~~ 138 (276)
T 1u83_A 82 LEEKISTLK-------EHDITFFFGGT-----LFEKYVSQK--------KVNEFHRYCTYFGCEYIEI-SN--GTLPMTN 138 (276)
T ss_dssp HHHHHHHHH-------HTTCEEEECHH-----HHHHHHHTT--------CHHHHHHHHHHTTCSEEEE-CC--SSSCCCH
T ss_pred HHHHHHHHH-------HcCCeEeCCcH-----HHHHHHHcC--------cHHHHHHHHHHcCCCEEEE-CC--CcccCCH
Confidence 666665542 23578888986 333333333 4567888999999999988 22 2245677
Q ss_pred HHHHHhhccCCCCeEEEEeCC--CCC-CccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 153 DWLEKTLETKPTPKLVSVVNP--GNP-SGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 153 e~l~~~l~~~~~~~~v~i~~p--~np-tG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+...+.++.... ...++... .++ .....+++++.+.++-+-+.|+..|+=|+.
T Consensus 139 ~~~~~lI~~a~~-~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaR 194 (276)
T 1u83_A 139 KEKAAYIADFSD-EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEAR 194 (276)
T ss_dssp HHHHHHHHHHTT-TSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC--
T ss_pred HHHHHHHHHHHh-hcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 888888773221 23333322 233 233455566666666666779888877765
No 420
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=28.27 E-value=1.2e+02 Score=21.45 Aligned_cols=42 Identities=19% Similarity=0.164 Sum_probs=29.4
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.+...+.++.+. .++|++.+ + + |++....|-.+|++++++++
T Consensus 26 ~~~v~kai~~gk-a~lViiA~--D----~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGE-GKLVVLAG--N----I-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTC-CSEEEECT--T----C-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCC-ceEEEEeC--C----C-CHHHHHHHHHHHHHcCCCEE
Confidence 456677777554 57777652 1 2 56778899999999998854
No 421
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=28.18 E-value=1.2e+02 Score=26.77 Aligned_cols=23 Identities=9% Similarity=0.017 Sum_probs=14.6
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEe
Q 015890 181 IPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livD 203 (398)
.+.++.++|.++|+++|+.+.+-
T Consensus 129 ~~~~ea~~l~~~a~~~g~~l~vg 151 (393)
T 4fb5_A 129 PAYADAERMLATAERSGKVAALG 151 (393)
T ss_dssp SSHHHHHHHHHHHHHSSSCEEEC
T ss_pred ccHHHHHHhhhhHHhcCCccccc
Confidence 34556666666666666666655
No 422
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=28.14 E-value=2.6e+02 Score=23.23 Aligned_cols=93 Identities=11% Similarity=0.001 Sum_probs=47.5
Q ss_pred EEEecCh-HHHHHHHHHHhccC-CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEE
Q 015890 92 VMVTAGA-NQAFVNIVLTLCDA-GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (398)
Q Consensus 92 v~~~~g~-t~a~~~~~~~l~~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~ 169 (398)
|++|.++ .-+-. ++..|.+. |.+|.+..-.-... ..+...+++++.. +. -|.+.+++.++. +..|+
T Consensus 3 ilVtGatG~iG~~-l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~-D~------~d~~~l~~~~~~---~d~vi 70 (289)
T 3e48_A 3 IMLTGATGHLGTH-ITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQL-DY------FNQESMVEAFKG---MDTVV 70 (289)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEEC-CT------TCHHHHHHHTTT---CSEEE
T ss_pred EEEEcCCchHHHH-HHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEc-CC------CCHHHHHHHHhC---CCEEE
Confidence 5555443 33333 44446554 76665543221111 1122346666554 22 267888888874 46666
Q ss_pred EeCCC-CCCccCCCHHHHHHHHHHHHHcCC
Q 015890 170 VVNPG-NPSGTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 170 i~~p~-nptG~~~~~~~l~~i~~l~~~~~~ 198 (398)
.+.+. ++. ....+..+.+++.|++.|+
T Consensus 71 ~~a~~~~~~--~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 71 FIPSIIHPS--FKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp ECCCCCCSH--HHHHHHHHHHHHHHHHTTC
T ss_pred EeCCCCccc--hhhHHHHHHHHHHHHHcCC
Confidence 54322 211 1123446788888888875
No 423
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.05 E-value=1.6e+02 Score=25.26 Aligned_cols=111 Identities=9% Similarity=0.077 Sum_probs=60.9
Q ss_pred CcHHHHHHHHHHHhhhcCC-------C-CCc-EEEecChHHHHHHHHHHhccCC--CEEEEeCCCCcChhhHHHhcCcEE
Q 015890 69 GLPELRDALVKKLNQENKL-------Y-KSS-VMVTAGANQAFVNIVLTLCDAG--DSVVMFAPYYFNSYMSFQMTGVTH 137 (398)
Q Consensus 69 ~~~~~~~~l~~~l~~~~~~-------~-~~~-v~~~~g~t~a~~~~~~~l~~~g--d~Vl~~~p~~~~~~~~~~~~g~~~ 137 (398)
...++++.+.+.-. .+++ + +.. +++.+|....+..++....... -+|.+--..+......++..|+.+
T Consensus 68 ~~~~L~~~f~~la~-~~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~ 146 (292)
T 3lou_A 68 RVDALRREFEPIAE-RFRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPF 146 (292)
T ss_dssp CHHHHHHHHHHHHH-HHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHH-hcCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCE
Confidence 45678877766433 3332 1 223 4556666677777777654321 133332233344556789999988
Q ss_pred EEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890 138 ILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (398)
Q Consensus 138 ~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~ 187 (398)
..+ |..... ... -+++.+.+++.. +.++++.. .+.+++++.++
T Consensus 147 ~~~-~~~~~~-r~~~~~~~~~~l~~~~-~Dlivla~----y~~il~~~~l~ 190 (292)
T 3lou_A 147 RHF-PITADT-KAQQEAQWLDVFETSG-AELVILAR----YMQVLSPEASA 190 (292)
T ss_dssp EEC-CCCSSC-HHHHHHHHHHHHHHHT-CSEEEESS----CCSCCCHHHHH
T ss_pred EEe-CCCcCC-HHHHHHHHHHHHHHhC-CCEEEecC----chhhCCHHHHh
Confidence 877 543211 111 124555565433 58888762 46788865543
No 424
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=27.89 E-value=2.5e+02 Score=23.01 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=49.5
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhc----c
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~ 161 (398)
...+++|.++...=..+...|.+.|.+|++..-.-....... +..+.++..+ ..|-. |.+.+++.++ .
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV-QMDVR----NTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEE-ECCTT----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE-EccCC----CHHHHHHHHHHHHHH
Confidence 344566555544334556667788888877544332222222 2234455555 44422 5566665554 1
Q ss_pred CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015890 162 KPTPKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l 192 (398)
...+.+++-+......+. -.+.+++++..+.
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 122566665433222222 3566666666553
No 425
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=27.79 E-value=41 Score=32.27 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 5789999999999999999999888
No 426
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=27.76 E-value=2.2e+02 Score=25.67 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=48.9
Q ss_pred CCcChhhHHHh-----cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890 122 YYFNSYMSFQM-----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (398)
Q Consensus 122 ~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (398)
.|..+...+.. -.++.+.+ -++.. .-.+...++++.+ +-|++.-|- ..+.++.++|.++++++
T Consensus 93 ~~~~~~~ll~~~~~~~~~vD~V~I-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~ea~~l~~~a~~~ 160 (417)
T 3v5n_A 93 VYSDFKEMAIREAKLKNGIEAVAI-VTPNH---VHYAAAKEFLKRG---IHVICDKPL-----TSTLADAKKLKKAADES 160 (417)
T ss_dssp BCSCHHHHHHHHHHCTTCCSEEEE-CSCTT---SHHHHHHHHHTTT---CEEEEESSS-----CSSHHHHHHHHHHHHHC
T ss_pred ccCCHHHHHhcccccCCCCcEEEE-CCCcH---HHHHHHHHHHhCC---CeEEEECCC-----cCCHHHHHHHHHHHHHc
Confidence 55667776665 56777776 44322 2355666666654 567777552 24678899999999999
Q ss_pred CCEEEEeece
Q 015890 197 GSWLVVDNTY 206 (398)
Q Consensus 197 ~~~livDe~~ 206 (398)
|+.+.+...+
T Consensus 161 g~~~~v~~~~ 170 (417)
T 3v5n_A 161 DALFVLTHNY 170 (417)
T ss_dssp SSCEEEECGG
T ss_pred CCEEEEEecc
Confidence 9988887544
No 427
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=27.68 E-value=44 Score=32.55 Aligned_cols=56 Identities=9% Similarity=0.049 Sum_probs=38.2
Q ss_pred ChHHHHHhhc--cCCCCeEEEEeCCC---CCCc-----------cCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 151 DADWLEKTLE--TKPTPKLVSVVNPG---NPSG-----------TYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 151 d~e~l~~~l~--~~~~~~~v~i~~p~---nptG-----------~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
|+.-|.+.|+ ..-.+.+|++.... +-.| ..-+.++++++++.||++|+.||+|-|+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecc
Confidence 5666666655 11125777776321 1123 2237889999999999999999999887
No 428
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=27.66 E-value=43 Score=31.21 Aligned_cols=24 Identities=17% Similarity=0.314 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEeece
Q 015890 183 ERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.++++++++.|+++|+.||+|-|+
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999999999999999999887
No 429
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=27.63 E-value=63 Score=26.51 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc---CCCCeEEEEeCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---KPTPKLVSVVNP 173 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---~~~~~~v~i~~p 173 (398)
|.++..++..+...|.+|++..|....- ...+...|.....+ +. .+.+++.+.+.. ...+.+|+|...
T Consensus 26 TT~ll~~~~r~~~~g~kVli~~~~~d~r~~~~i~srlG~~~~~~-~~------~~~~~i~~~i~~~~~~~~~dvViIDEa 98 (223)
T 2b8t_A 26 TAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSV-EV------ESAPEILNYIMSNSFNDETKVIGIDEV 98 (223)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCE-EE------SSTHHHHHHHHSTTSCTTCCEEEECSG
T ss_pred HHHHHHHHHHHHhcCCEEEEEEeccCchHHHHHHHhcCCCcccc-cc------CCHHHHHHHHHHHhhCCCCCEEEEecC
Confidence 4444444445555677888876665321 12223334221111 11 123344444432 122689999866
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
+. ++.+.++.+..+++. |+.+|+=.
T Consensus 99 Q~-----l~~~~ve~l~~L~~~-gi~Vil~G 123 (223)
T 2b8t_A 99 QF-----FDDRICEVANILAEN-GFVVIISG 123 (223)
T ss_dssp GG-----SCTHHHHHHHHHHHT-TCEEEEEC
T ss_pred cc-----CcHHHHHHHHHHHhC-CCeEEEEe
Confidence 54 556667777777764 88877654
No 430
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=27.49 E-value=45 Score=32.15 Aligned_cols=25 Identities=12% Similarity=0.035 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5788999999999999999999888
No 431
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=27.48 E-value=45 Score=32.16 Aligned_cols=25 Identities=20% Similarity=0.220 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 197 t~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 197 SNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECC
Confidence 5788999999999999999999888
No 432
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=27.41 E-value=28 Score=29.91 Aligned_cols=56 Identities=11% Similarity=0.009 Sum_probs=34.9
Q ss_pred cCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
|.+++ ..+|.+.+++.++ -.. +..+++. .++--+..++.++..++.+.+.+ .+++|
T Consensus 9 Pf~~d-g~iD~~~l~~lv~~li~~-v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 9 PFDRE-GRLDEEAFRELAQALEPL-VDGLLVY-GSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp CBCTT-CCBCHHHHHHHHHHHGGG-SSCCEET-CTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCCC-CCcCHHHHHHHHHHHHhh-CCEEEEC-CcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 44444 3688888888776 122 4555544 33334456888888888887766 55554
No 433
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=27.33 E-value=1.8e+02 Score=23.96 Aligned_cols=89 Identities=7% Similarity=-0.097 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890 99 NQAFVNIVLTLCDAGDSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (398)
Q Consensus 99 t~a~~~~~~~l~~~gd~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n 175 (398)
|+++..+.+. ...|.+|++..|.-. + ...+...|.+...+ +.. +.+++.+.+. ...+|+|.-.+.
T Consensus 34 T~lL~~~~r~-~~~g~kvli~kp~~D~Ryg-~~i~sr~G~~~~a~-~i~------~~~di~~~~~---~~dvViIDEaQF 101 (234)
T 2orv_A 34 TELMRRVRRF-QIAQYKCLVIKYAKDTRYS-SSFCTHDRNTMEAL-PAC------LLRDVAQEAL---GVAVIGIDEGQF 101 (234)
T ss_dssp HHHHHHHHHH-HTTTCCEEEEEETTCCCC------------CEEE-EES------SGGGGHHHHT---TCSEEEESSGGG
T ss_pred HHHHHHHHHH-HHCCCeEEEEeecCCccch-HHHHhhcCCeeEEE-ecC------CHHHHHHHhc---cCCEEEEEchhh
Confidence 4555555554 456778888766642 2 44455556654444 322 1122333332 258999987766
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-++ +.+++++..+.|+.+|+=.-.
T Consensus 102 ~~~-------v~el~~~l~~~gi~VI~~GL~ 125 (234)
T 2orv_A 102 FPD-------IVEFCEAMANAGKTVIVAALD 125 (234)
T ss_dssp CTT-------HHHHHHHHHHTTCEEEEECCS
T ss_pred hhh-------HHHHHHHHHhCCCEEEEEecc
Confidence 542 677777777789999875444
No 434
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=27.29 E-value=87 Score=26.86 Aligned_cols=58 Identities=9% Similarity=0.005 Sum_probs=37.2
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.+++ ..+|.+.+++.++ +.. +..+++. .++--+..++.++..++.+.+.+. .+++|+
T Consensus 12 Pf~~d-g~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 12 PMDEK-GNVCRASLKKLIDYHVASG-TSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CBCTT-SCBCHHHHHHHHHHHHHHT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCC-CCcCHHHHHHHHHHHHHcC-CCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 44444 4789998888876 222 5777665 333344568888888888887653 355553
No 435
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=27.18 E-value=46 Score=31.82 Aligned_cols=25 Identities=12% Similarity=0.065 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|.
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5788999999999999999999888
No 436
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=27.11 E-value=94 Score=25.61 Aligned_cols=107 Identities=10% Similarity=0.016 Sum_probs=57.9
Q ss_pred EEecChHHHHHHHHHHhccCC-CEEEEeC--CCC-------cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890 93 MVTAGANQAFVNIVLTLCDAG-DSVVMFA--PYY-------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (398)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~--p~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~ 162 (398)
.+...-..+...+...|.+.| .+|.+.. +.+ .++...++..|.++..+ ........-..+.+++.++..
T Consensus 99 ~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 177 (272)
T 3o74_A 99 SVISDDRDASRQLAASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRY-QGEAFSRECGQRLMQQLIDDL 177 (272)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEE-EESSSSHHHHHHHHHHHHHHH
T ss_pred EEEEchHHHHHHHHHHHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChhee-ecCCCCHHHHHHHHHHHHhcC
Confidence 445555677777888887777 5666543 222 13445556667765544 221111111134456666543
Q ss_pred C-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC
Q 015890 163 P-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR 212 (398)
Q Consensus 163 ~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~ 212 (398)
+ .+.+|+.. +..-...+.+.+++.|+ +-+++. .++++.
T Consensus 178 ~~~~~ai~~~----------~d~~a~g~~~al~~~g~--vp~di~vvg~d~~ 217 (272)
T 3o74_A 178 GGLPDALVTT----------SYVLLQGVFDTLQARPV--DSRQLQLGTFGDN 217 (272)
T ss_dssp TSCCSEEEES----------SHHHHHHHHHHHHTSCG--GGCCCEEEEESCC
T ss_pred CCCCcEEEEe----------CchHHHHHHHHHHHcCC--CccceEEEEeCCh
Confidence 3 35776643 12235667777788886 456666 666554
No 437
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=27.08 E-value=46 Score=31.93 Aligned_cols=26 Identities=27% Similarity=0.570 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-+.++++++++.|+++|+.||+|-|+
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 36889999999999999999999888
No 438
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=27.02 E-value=47 Score=31.67 Aligned_cols=25 Identities=24% Similarity=0.203 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999888
No 439
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=26.84 E-value=1.1e+02 Score=29.00 Aligned_cols=79 Identities=18% Similarity=0.141 Sum_probs=49.5
Q ss_pred cCCCEEEEeCCCCcChhh-------HHHhcCcEEEEec-cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890 111 DAGDSVVMFAPYYFNSYM-------SFQMTGVTHILVG-PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (398)
Q Consensus 111 ~~gd~Vl~~~p~~~~~~~-------~~~~~g~~~~~~~-~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~ 182 (398)
++||.|++....-++... .+...|++++.-. .......+.+.++|...++.-. |+-++..+. -
T Consensus 322 ~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~-Pk~~ipvHG-----e--- 392 (555)
T 3zq4_A 322 NPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIK-PKFFMPIHG-----E--- 392 (555)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSC-EEEEEEESB-----C---
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhC-CCEEEEcCC-----C---
Confidence 478999998877666442 3456788886510 1111123568899999888543 676665543 2
Q ss_pred HHHHHHHHHHHHHcCC
Q 015890 183 ERLLKRISDLCKAAGS 198 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~ 198 (398)
...+.+.++++++.|+
T Consensus 393 ~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 393 YRMQKMHVKLATDCGI 408 (555)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 2337777788887664
No 440
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=26.84 E-value=2.1e+02 Score=21.77 Aligned_cols=92 Identities=10% Similarity=-0.001 Sum_probs=54.9
Q ss_pred HHHHHHHHHhccC--CCEEEEeCCCCcChhhHHHh-cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890 100 QAFVNIVLTLCDA--GDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (398)
Q Consensus 100 ~a~~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np 176 (398)
..+-.+...+.+- |-+++.... ....++. .|+++..+.... .|. + .++.+.+.++. +.+|+-. + .|
T Consensus 24 ~~~v~~ak~~~~ll~Gf~l~AT~g----Ta~~L~e~~Gl~v~~v~k~~-eGG--~-p~I~d~I~~ge-IdlVInt-~-~p 92 (152)
T 1b93_A 24 QMLMSWVERHQPLLEQHVLYATGT----TGNLISRATGMNVNAMLSGP-MGG--D-QQVGALISEGK-IDVLIFF-W-DP 92 (152)
T ss_dssp HHHHHHHHHTHHHHTTSEEEEETT----HHHHHHHHHCCCCEEECCGG-GTH--H-HHHHHHHHTTC-CCEEEEE-C-CT
T ss_pred HHHHHHHHHHHHHhCCCEEEEccH----HHHHHHHHhCceeEEEEecC-CCC--C-chHHHHHHCCC-ccEEEEc-C-Cc
Confidence 3333344444333 556665543 3344555 777777662222 221 2 36788887765 6777655 2 34
Q ss_pred CccCCC-HHHHHHHHHHHHHcCCEEEEe
Q 015890 177 SGTYIP-ERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 177 tG~~~~-~~~l~~i~~l~~~~~~~livD 203 (398)
.| ..+ ..+...|...|-.||++++.-
T Consensus 93 l~-~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 93 LN-AVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp TS-CCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred cc-CCcccccHHHHHHHHHHcCCCEEeC
Confidence 45 344 677999999999999998854
No 441
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=26.83 E-value=43 Score=30.80 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=24.7
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 176 PSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
+.|..++.+++++|++.|+++|+-||-.
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VIPE 111 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLIPT 111 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEEe
Confidence 4567899999999999999999999854
No 442
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=26.69 E-value=1.2e+02 Score=29.67 Aligned_cols=26 Identities=15% Similarity=0.121 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 181 IPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
-+.++++++++.|+++|+.+|+|-+.
T Consensus 104 Gt~~d~~~lv~~~h~~gi~vi~D~V~ 129 (669)
T 3k8k_A 104 GTESDFDRLVTEAHNRGIKIYLDYVM 129 (669)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECc
Confidence 36889999999999999999999887
No 443
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=26.68 E-value=3.1e+02 Score=23.60 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=27.9
Q ss_pred cCCccCCCCCcHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890 35 LAQGVVYWQPPKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (398)
Q Consensus 35 l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~ 95 (398)
++.|....+...+..+++..+++.+- ...|+ . ++.+.+.+++ .+.+.++++++
T Consensus 54 lglGt~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg----~---E~~lG~al~~-~~~~R~~v~I~ 111 (310)
T 3b3e_A 54 FGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYK----N---EEGVGIGIKE-SGVAREELFIT 111 (310)
T ss_dssp BCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGS----C---HHHHHHHHHH-SSSCGGGCEEE
T ss_pred eeeeCCcCCCHHHHHHHHHHHHHcCCCEEECCCccC----C---HHHHHHHHHh-cCCCcceEEEE
Confidence 33343333344777788888876532 22342 2 4456666654 24445566655
No 444
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=26.63 E-value=80 Score=27.69 Aligned_cols=21 Identities=0% Similarity=-0.159 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEe
Q 015890 183 ERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livD 203 (398)
.++.++|.++|++.|+.+.+.
T Consensus 123 ~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 123 AGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp GGGGHHHHHHHHHHTCCEEEC
T ss_pred hhhHHHHHHHHHHcCCceeEe
Confidence 444666666666666666555
No 445
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=26.61 E-value=48 Score=31.59 Aligned_cols=25 Identities=8% Similarity=-0.058 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|.
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5788999999999999999999887
No 446
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.57 E-value=3e+02 Score=23.47 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=51.7
Q ss_pred cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH----hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe
Q 015890 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK 166 (398)
Q Consensus 91 ~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~ 166 (398)
.|++|.++...=..+...|.+.|.+|++..-.-.......+ ..+..+..+ ..|- -|.+.+++.++... +.
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl----~d~~~~~~~~~~~~-~d 80 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH-ETDV----SDERALARIFDAHP-IT 80 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE-CCCT----TCHHHHHHHHHHSC-CC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEE-Eeec----CCHHHHHHHHhccC-Cc
Confidence 46666555444455666777788888776543322222221 123333334 3321 26788888887533 56
Q ss_pred EEEEeCCCCCCccCC---------CHHHHHHHHHHHHHcCC
Q 015890 167 LVSVVNPGNPSGTYI---------PERLLKRISDLCKAAGS 198 (398)
Q Consensus 167 ~v~i~~p~nptG~~~---------~~~~l~~i~~l~~~~~~ 198 (398)
+|+-.......+... ...-...+++.|++.+.
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 666553332222110 11123456677777664
No 447
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=26.47 E-value=69 Score=28.15 Aligned_cols=31 Identities=29% Similarity=0.181 Sum_probs=27.4
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
.+|.+-..+.+...++++.|+++|+.+++|=
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5677778888899999999999999999993
No 448
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.43 E-value=83 Score=26.96 Aligned_cols=56 Identities=16% Similarity=0.125 Sum_probs=33.1
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLV 201 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li 201 (398)
|.++++ +|.+.+++.++ ... +..+++. .++--+..++.++..++.+.+.+. .+++|
T Consensus 13 Pf~~dg--iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3a5f_A 13 PFTNTG--VDFDKLSELIEWHIKSK-TDAIIVC-GTTGEATTMTETERKETIKFVIDKVNKRIPVI 74 (291)
T ss_dssp CBCSSS--BCHHHHHHHHHHHHHTT-CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CcCCCC--cCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 444444 88888877766 222 5666654 222233457888888888776542 35555
No 449
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=26.42 E-value=1.9e+02 Score=23.40 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=30.4
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
.+++++.+++.. +..++++.|+. ..+++++.|.+.|+.-|..
T Consensus 137 ~~dL~~~v~~~~-Id~vIIAvPs~---------~aq~v~d~lv~~GIk~I~n 178 (212)
T 3keo_A 137 ISTINDHLIDSD-IETAILTVPST---------EAQEVADILVKAGIKGILS 178 (212)
T ss_dssp GGGHHHHC-CCS-CCEEEECSCGG---------GHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcC-CCEEEEecCch---------hHHHHHHHHHHcCCCEEEE
Confidence 467888887654 68888886643 1578889888999887766
No 450
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.17 E-value=2.5e+02 Score=24.78 Aligned_cols=70 Identities=10% Similarity=0.019 Sum_probs=37.8
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+.+.+..-.++++.+ -++.. .-.+...++++.+ +-|+++-| . ..+.++.++|.++|+++|+.+.+
T Consensus 72 ~~~~~~ll~~~~iD~V~i-~tp~~---~h~~~~~~al~~G---k~V~~EKP---~--a~~~~~~~~l~~~a~~~~~~~~v 139 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFFD-AATTQ---ARPGLLTQAINAG---KHVYCEKP---I--ATNFEEALEVVKLANSKGVKHGT 139 (383)
T ss_dssp ESCHHHHHHCSSCCEEEE-CSCSS---SSHHHHHHHHTTT---CEEEECSC---S--CSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-CCCch---HHHHHHHHHHHCC---CeEEEcCC---C--CCCHHHHHHHHHHHHHcCCeEEE
Confidence 445555555555555555 33221 2345555666544 44555433 2 23466677777777777776665
Q ss_pred ee
Q 015890 203 DN 204 (398)
Q Consensus 203 De 204 (398)
-.
T Consensus 140 ~~ 141 (383)
T 3oqb_A 140 VQ 141 (383)
T ss_dssp CC
T ss_pred Ee
Confidence 53
No 451
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.08 E-value=2.8e+02 Score=22.86 Aligned_cols=99 Identities=17% Similarity=0.068 Sum_probs=49.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH---HHhcC-cEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS---FQMTG-VTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
....+++|.++...=..+...|.+.|.+|++..-.-...... ++..+ .++..+ ..|-. |.+.+++.++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV-QTDVS----DRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEE-ECCTT----SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEE-EcCCC----CHHHHHHHHHHHH
Confidence 345566666554444455666778888887765433222222 22333 355555 44422 5556655544
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+....+.+. -.+.+++++..+
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2122566665543332222 246666666554
No 452
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=26.07 E-value=2.6e+02 Score=22.61 Aligned_cols=98 Identities=8% Similarity=0.024 Sum_probs=47.9
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEE-EEeccCCCCCCCCChHHHHHhhcc---CCC
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH-ILVGPCSSKTLHPDADWLEKTLET---KPT 164 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~e~l~~~l~~---~~~ 164 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++ ..+ ..|-. |.+.+++.++. ...
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~~~~ 85 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARI-VADVT----DAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEE-ECCTT----CHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEE-EEecC----CHHHHHHHHHHHHhhCC
Confidence 4456766555444456666677788888776433222222333334444 334 33321 56666665542 122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 165 ~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
+.+++-+......+. -.+.+++++..+
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 86 VSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp CCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 566665533322222 235555554443
No 453
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=25.99 E-value=3.3e+02 Score=23.75 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=51.2
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----------hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 158 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.. ....++..|.++..+ ..|-. |.+.+++.
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~-~~Dv~----d~~~v~~~ 119 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC-IVDVR----DEQQISAA 119 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEE-ECCTT----CHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEE-EccCC----CHHHHHHH
Confidence 3456666555443345566677888887765433221 223345557677766 55432 56666665
Q ss_pred hc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 159 LE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 159 l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
++ ....+.+++-+......+. -.+.++++++.+
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 54 1122566665533222222 245566666554
No 454
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=25.96 E-value=1.5e+02 Score=19.68 Aligned_cols=45 Identities=18% Similarity=0.119 Sum_probs=31.4
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe 204 (398)
..+..+.++.+. .++|++.+- .+++....+-.+|++++++++.-.
T Consensus 16 ~~~v~kai~~gk-aklViiA~D-------~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 16 TKQTVKALKRGS-VKEVVVAKD-------ADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHHHTTTC-EEEEEEETT-------SCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHcCC-eeEEEEeCC-------CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 456677777655 677777632 223557889999999999987654
No 455
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.78 E-value=78 Score=27.58 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=37.6
Q ss_pred cCCCCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.++++ .+|.+.+++.++ ... +..+++. .++--+..++.++.+++++.+.+. .+++|+
T Consensus 35 Pf~~dg-~iD~~~l~~lv~~li~~G-v~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAADG-GLDLPALGRSIERLIDGG-VHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTT-CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455454 789999888876 332 5777755 233334568889999999887653 345554
No 456
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=25.74 E-value=51 Score=31.40 Aligned_cols=25 Identities=8% Similarity=0.057 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|.
T Consensus 77 t~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 77 TMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999999999999887
No 457
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=25.73 E-value=2.8e+02 Score=22.75 Aligned_cols=97 Identities=10% Similarity=0.002 Sum_probs=47.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC-hhhHHHhc----CcEEEEeccCCCCCCCCChHHHHHhhcc---
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN-SYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLET--- 161 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~l~~--- 161 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.. .....+.. |.++..+ ..|-. |.+.+++.++.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD-GADLS----KGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEE-CCCTT----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEE-ECCCC----CHHHHHHHHHHHHH
Confidence 345666555444445566677788888776543222 22222211 5555555 44422 55666665541
Q ss_pred -CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 162 -KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 162 -~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
...+.+++-+......+. -.+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 122566665433222222 245566665554
No 458
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=25.64 E-value=1.9e+02 Score=24.63 Aligned_cols=41 Identities=2% Similarity=0.015 Sum_probs=31.5
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEE
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li 201 (398)
++.++.+.+.+ .+++++. |.|.+ .+ -++.++.|+++|+.++
T Consensus 234 ~dti~~~~~ag--~~~ivi~----~g~si~~~---~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 234 VATIHRAARAG--LAGIVGE----AGRLLVVD---REAVIAAADDLGLFVL 275 (283)
T ss_dssp HHHHHHHHHTT--CCEEEEE----TTBCEETT---HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcC--CeEEEEc----CCCcEEeC---HHHHHHHHHHcCCEEE
Confidence 38888888765 4888887 45665 46 5778889999999987
No 459
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=25.52 E-value=78 Score=27.03 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=32.3
Q ss_pred CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh---hccCCCCeEEEEeC
Q 015890 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT---LETKPTPKLVSVVN 172 (398)
Q Consensus 112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~---l~~~~~~~~v~i~~ 172 (398)
++..+++..+.| .-.++.+|++.+.+ .....+..+++.+|.+. ++.+. +++|+...
T Consensus 176 ~~~~~v~~H~af---~Yf~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~ 234 (284)
T 3cx3_A 176 TQKTFVTQHTAF---SYLAKRFGLNQLGI-AGISPEQEPSPRQLTEIQEFVKTYK-VKTIFTES 234 (284)
T ss_dssp SCCCEEEEESCC---HHHHHHTTCCEEEE-ECSSTTCCCCSHHHHHHHHHHHHTT-CCCEEECS
T ss_pred CCCEEEEECCch---HHHHHHcCCEEeec-cCCCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeC
Confidence 456777776664 33468899987766 32222334555555554 44444 57777663
No 460
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=25.42 E-value=2.9e+02 Score=22.83 Aligned_cols=100 Identities=10% Similarity=-0.012 Sum_probs=49.2
Q ss_pred CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH----hcCcEEEEeccCCCCCCCCChHHHHHhhc--
Q 015890 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLE-- 160 (398)
Q Consensus 87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-- 160 (398)
.....+++|.++...=..+...|.+.|.+|++..-.-.......+ ..|.++..+ ..|-. |.+.+++.++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~ 92 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTV-AIDLA----EPDAPAELARRA 92 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTT----STTHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-EecCC----CHHHHHHHHHHH
Confidence 334556666555444445566677888888776543322222221 145555555 44422 3344444333
Q ss_pred --cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 --TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 --~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 2222577665543322222 246666666554
No 461
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=25.35 E-value=48 Score=32.57 Aligned_cols=25 Identities=12% Similarity=0.060 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-++
T Consensus 106 t~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 106 NWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4788999999999999999999888
No 462
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.33 E-value=50 Score=32.51 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-|+
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccc
Confidence 6889999999999999999999887
No 463
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=25.29 E-value=48 Score=32.53 Aligned_cols=25 Identities=8% Similarity=0.041 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-++
T Consensus 115 t~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 115 SFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4788999999999999999999888
No 464
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=25.23 E-value=49 Score=32.50 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-++
T Consensus 110 t~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 110 TLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788999999999999999999888
No 465
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=25.17 E-value=3e+02 Score=23.05 Aligned_cols=149 Identities=18% Similarity=0.129 Sum_probs=68.0
Q ss_pred eEEcCCccCCCCCcHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecC------hHH
Q 015890 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG------ANQ 100 (398)
Q Consensus 32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g------~t~ 100 (398)
+=.++.|....+...+..+++..++..+- ...|+ . .+.+.+.+++. +.+.+++++++= +.+
T Consensus 17 v~~lglGt~~~~~~~~~~~~l~~Al~~G~~~~DTA~~Yg----~---E~~lG~al~~~-~~~R~~~~i~TK~~~~~~~~~ 88 (276)
T 3f7j_A 17 MPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYK----N---EEGVGIGIKES-GVAREELFITSKVWNEDQGYE 88 (276)
T ss_dssp EESBCEECTTCCTTHHHHHHHHHHHHTTCCEEECCGGGS----C---HHHHHHHHHHH-CSCGGGCEEEEEECGGGCSHH
T ss_pred ecceeecCCcCCCHHHHHHHHHHHHHcCCCEEECcCccc----C---HHHHHHHHhhc-CCCcccEEEEEeeCCCCCCHH
Confidence 33444454344445777788888876532 22343 1 34555555432 444555655531 112
Q ss_pred ----HHHHHHHHhcc-CCCEEEEeCCCCcChhhH------HHhcC-cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890 101 ----AFVNIVLTLCD-AGDSVVMFAPYYFNSYMS------FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (398)
Q Consensus 101 ----a~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~------~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v 168 (398)
++...+..|-. -=|-.++-.|........ ++..| ++.+.+ . ..+.+.+++.++... .+.+
T Consensus 89 ~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGv-----S--n~~~~~l~~~~~~~~-~~~~ 160 (276)
T 3f7j_A 89 TTLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGV-----S--NFQVHHLEELLKDAE-IKPM 160 (276)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEE-----E--SCCHHHHHHHHHHCS-SCCS
T ss_pred HHHHHHHHHHHHhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEe-----c--cCCHHHHHHHHHhcC-CCce
Confidence 22222222311 114455545543322222 23334 233333 1 235677777766322 2222
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
+.....||.- . -.++.+.|+++|+.++.
T Consensus 161 ~~Q~~~~~~~---~---~~~l~~~~~~~gi~v~a 188 (276)
T 3f7j_A 161 VNQVEFHPRL---T---QKELRDYCKGQGIQLEA 188 (276)
T ss_dssp EEEEECBTTB---C---CHHHHHHHHHHTCEEEE
T ss_pred eeeeeecccc---C---CHHHHHHHHHCCCEEEE
Confidence 2222233321 1 14677888888877653
No 466
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=25.12 E-value=1.3e+02 Score=25.78 Aligned_cols=53 Identities=8% Similarity=0.028 Sum_probs=33.4
Q ss_pred CCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 148 LHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 148 ~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
..+|.+.+++.++ +.. +..+++. .++--+..++.++..++.+.+.+. .+++|+
T Consensus 16 g~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNG-TDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TEECHHHHHHHHHHHHTTT-CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHCC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3688888888776 222 5676655 333334567888888888877642 355553
No 467
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.04 E-value=1e+02 Score=26.94 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=48.4
Q ss_pred CcChhhHHHh-cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 123 YFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 123 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
|..+...+.. -.++.+.+ .++.. .-.+...++++.+ +-|+++-|- ..+.++.++|.++|+++|+.+.
T Consensus 69 ~~~~~~ll~~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKP~-----a~~~~e~~~l~~~a~~~g~~~~ 136 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSL-CMPPQ---YRYEAAYKALVAG---KHVFLEKPP-----GATLSEVADLEALANKQGASLF 136 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEE-CSCHH---HHHHHHHHHHHTT---CEEEECSSS-----CSSHHHHHHHHHHHHHHTCCEE
T ss_pred cCCHHHHHhCCCCCCEEEE-eCCcH---HHHHHHHHHHHcC---CcEEEeCCC-----CCCHHHHHHHHHHHHhcCCeEE
Confidence 4566677776 66777777 44321 1355666666654 677776542 2467889999999999999888
Q ss_pred Eeece
Q 015890 202 VDNTY 206 (398)
Q Consensus 202 vDe~~ 206 (398)
+-..+
T Consensus 137 v~~~~ 141 (330)
T 4ew6_A 137 ASWHS 141 (330)
T ss_dssp ECCGG
T ss_pred EEehh
Confidence 76433
No 468
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=25.01 E-value=49 Score=32.49 Aligned_cols=25 Identities=8% Similarity=0.021 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.||++|+.||+|-++
T Consensus 114 t~~dfk~Lv~~aH~~GI~VilD~V~ 138 (686)
T 1d3c_A 114 TIADFQNLIAAAHAKNIKVIIDFAP 138 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 4788999999999999999999888
No 469
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=25.01 E-value=2.9e+02 Score=22.67 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=47.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CC
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KP 163 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~ 163 (398)
....+++|.++...=..+...|.+.|.+|++..-.-.......+....++..+ ..|-. |.+.+++.++. ..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV-EVDVT----KRASVDAAMQKAIDALG 85 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEE-ECCTT----CHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEeCC----CHHHHHHHHHHHHHHcC
Confidence 34456666655444455666677788888775433222222223232123333 33321 55666665541 11
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 164 ~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+.+++-+......+. -.+.+++++..+
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 2566665433222221 245556655554
No 470
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=24.94 E-value=54 Score=31.53 Aligned_cols=25 Identities=8% Similarity=0.001 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 86 t~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 86 TNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5788999999999999999999887
No 471
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=24.89 E-value=2.9e+02 Score=22.66 Aligned_cols=98 Identities=10% Similarity=0.063 Sum_probs=47.2
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh---c-CcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM---T-GVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.++...=..+...|.+.|.+|++..-.-.......+. . |.++..+ ..|-. |.+.+++.++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV-AVDVA----TPEGVDAVVESVRS 81 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-ECCTT----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEE-EcCCC----CHHHHHHHHHHHHH
Confidence 34566666554444556666777888887654322112221111 1 5455555 44422 5566666554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.+++++..+
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1112566665533222222 235555555443
No 472
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=24.89 E-value=2.2e+02 Score=24.15 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=47.0
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+.+.+..-.++.+.+ -++.. .-.+...++++.+ +-|++.-|- ..+.++.++|.++++++|+.+.+
T Consensus 54 ~~~~~ell~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~ea~~l~~~a~~~g~~~~~ 121 (294)
T 1lc0_A 54 QISLEDALRSQEIDVAYI-CSESS---SHEDYIRQFLQAG---KHVLVEYPM-----TLSFAAAQELWELAAQKGRVLHE 121 (294)
T ss_dssp BCCHHHHHHCSSEEEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESCS-----CSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHhcCCCCCEEEE-eCCcH---hHHHHHHHHHHCC---CcEEEeCCC-----CCCHHHHHHHHHHHHHhCCEEEE
Confidence 345666666667888887 44322 2356667777654 566666442 24678899999999999988766
Q ss_pred ee
Q 015890 203 DN 204 (398)
Q Consensus 203 De 204 (398)
--
T Consensus 122 ~~ 123 (294)
T 1lc0_A 122 EH 123 (294)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 473
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=24.89 E-value=1.6e+02 Score=25.55 Aligned_cols=68 Identities=13% Similarity=0.039 Sum_probs=38.2
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...+....++++.+ -++.. .-.+.+..+++.+ +-|++.-|- ..+.++.+++.++++++|+.+.+-
T Consensus 57 ~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 57 DKLEDMLADESIDVIYV-ATINQ---DHYKVAKAALLAG---KHVLVEKPF-----TLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp SCHHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHHCC---CeEEEccCC-----cCCHHHHHHHHHHHHHcCCEEEEE
Confidence 34444444444555555 33221 1244455555543 556666442 235677888888888888877665
No 474
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=24.88 E-value=2.3e+02 Score=23.17 Aligned_cols=70 Identities=7% Similarity=0.022 Sum_probs=42.5
Q ss_pred hhHHHhcCcEEEEeccCCCCCCC----CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 127 YMSFQMTGVTHILVGPCSSKTLH----PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 127 ~~~~~~~g~~~~~~~~~~~~~~~----~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
...++..|..++.+ ..+..++. .+.+.+.+.+.....+..|++.+...+ .+.+.+.++++..++.|..++
T Consensus 151 ~~~l~~~G~~~v~w-~~d~~Dw~~~~~~~~~~~~~~v~~~~~~g~Iil~Hd~~~----~t~~aL~~ii~~l~~~Gy~fv 224 (240)
T 1ny1_A 151 LKETKRLGYQTVFW-SVAFVDWKINNQKGKKYAYDHMIKQAHPGAIYLLHTVSR----DNAEALDDAITDLKKQGYTFK 224 (240)
T ss_dssp HHHHHHTTCEEBCC-SBCCSCCCGGGCCCHHHHHHHHHHTCCTTEEEEECSCST----THHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHcCCEEEEC-cccccccCCcCCCCHHHHHHHHHhCCCCCeEEEEcCCCh----hHHHHHHHHHHHHHHCCCEEE
Confidence 35678889888766 55544443 234555444432222456776665433 245779999999888886654
No 475
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.86 E-value=3e+02 Score=22.94 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=50.4
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC-cChhhH---HHh-cCcEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMS---FQM-TGVTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~-~~~~~~---~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
...+++|.++...=..+...|.+.|.+|++..-.- ...... ++. .+.++..+ ..|-. |.+.+++.++
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH-PADMT----KPSEIADMMAMVA 99 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEE-CCCTT----CHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEE-eCCCC----CHHHHHHHHHHHH
Confidence 45567776654444556666778888888765422 111111 122 24556655 44422 5566666554
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+......+. -.+.++++++.+
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2223566665543333332 246666666554
No 476
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=24.84 E-value=1.6e+02 Score=25.44 Aligned_cols=69 Identities=13% Similarity=0.056 Sum_probs=39.7
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...++...++.+.+ -++.. .-.+...++++.+ +-|++.-|- ..+.++.++|.++++++|+.+.+
T Consensus 55 ~~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---khVl~EKP~-----a~~~~e~~~l~~~a~~~g~~~~v 122 (336)
T 2p2s_A 55 AASAEQLITDASIDLIAC-AVIPC---DRAELALRTLDAG---KDFFTAKPP-----LTTLEQLDAVQRRVAETGRKFAV 122 (336)
T ss_dssp CSCHHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSSC-----CSCHHHHHHHHHHHHHHCCCEEE
T ss_pred cCCHHHHhhCCCCCEEEE-eCChh---hHHHHHHHHHHCC---CcEEEeCCC-----CCCHHHHHHHHHHHHHcCCEEEE
Confidence 444555555445666666 33321 1244555555543 455555442 24567788888888888887776
Q ss_pred e
Q 015890 203 D 203 (398)
Q Consensus 203 D 203 (398)
-
T Consensus 123 ~ 123 (336)
T 2p2s_A 123 Y 123 (336)
T ss_dssp C
T ss_pred e
Confidence 5
No 477
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=24.74 E-value=1.5e+02 Score=25.79 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=43.2
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...+..-.++.+.+ -++.. ...+...++++.+ +-|++.-|- ..+.++.+++.++|+++|+.+.+-
T Consensus 55 ~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP~-----a~~~~e~~~l~~~a~~~g~~~~v~ 122 (345)
T 3f4l_A 55 SDLDEVLNDPDVKLVVV-CTHAD---SHFEYAKRALEAG---KNVLVEKPF-----TPTLAQAKELFALAKSKGLTVTPY 122 (345)
T ss_dssp SCTHHHHTCTTEEEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSSS-----CSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHhcCCCCCEEEE-cCChH---HHHHHHHHHHHcC---CcEEEeCCC-----CCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34455555445666666 43322 1345566666654 566666442 245778999999999999888775
Q ss_pred ec
Q 015890 204 NT 205 (398)
Q Consensus 204 e~ 205 (398)
-.
T Consensus 123 ~~ 124 (345)
T 3f4l_A 123 QN 124 (345)
T ss_dssp CG
T ss_pred ec
Confidence 43
No 478
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=24.70 E-value=93 Score=29.50 Aligned_cols=51 Identities=18% Similarity=0.260 Sum_probs=36.5
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
.+.+++.++.+ ++.|.+-..+.+.... .+..+++.++|+++|+.+|+++-.
T Consensus 28 ~~~ve~al~~G--v~~vQlR~K~~~~~~~--~~~a~~l~~l~~~~~v~liIND~~ 78 (540)
T 3nl6_A 28 YGQVEAGLQNG--VTLVQIREKDADTKFF--IEEALQIKELCHAHNVPLIINDRI 78 (540)
T ss_dssp HHHHHHHHHTT--CSEEEECCSSSCTTHH--HHHHHHHHHHHHHTTCCEEECSCS
T ss_pred HHHHHHHHHCC--CCEEEEecCCCCHHHH--HHHHHHHHHHHHhcCCEEEEeCcH
Confidence 46777788765 4888887665544333 345788889999999999997633
No 479
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.67 E-value=45 Score=23.09 Aligned_cols=20 Identities=15% Similarity=0.032 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHcCCEEEEee
Q 015890 185 LLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe 204 (398)
--.+|.++|+++|++++.|.
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 28 CALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHHHcCCCEEECH
Confidence 37899999999999999995
No 480
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.65 E-value=2.8e+02 Score=22.52 Aligned_cols=98 Identities=13% Similarity=0.023 Sum_probs=47.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeC-CCCcCh---hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA-PYYFNS---YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~-p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.++...=..+...|.+.|.+|++.. ..-... ....+..+.++..+ ..|-. |.+.+++.++
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS-EGNVG----DWDSTKQAFDKVKA 87 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEE-ecCCC----CHHHHHHHHHHHHH
Confidence 34455555554433455566778887777643 322222 22334455555555 44322 5555555554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+..++-+......+. -.+.+++++..+
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2223566655433222222 246566665554
No 481
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=24.59 E-value=2.9e+02 Score=22.64 Aligned_cols=98 Identities=11% Similarity=-0.045 Sum_probs=47.9
Q ss_pred CCcEEEecCh-HHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH---hc-CcEEEEeccCCCCCCCCChHHHHHhhc---
Q 015890 89 KSSVMVTAGA-NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ---MT-GVTHILVGPCSSKTLHPDADWLEKTLE--- 160 (398)
Q Consensus 89 ~~~v~~~~g~-t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~-g~~~~~~~~~~~~~~~~d~e~l~~~l~--- 160 (398)
...+++|.++ +..=..+...|.+.|.+|++..-.-.......+ .. +.++..+ ..|-. |.+.+++.++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~----~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV-VCDVT----STEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEE-ECCTT----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEE-EeCCC----CHHHHHHHHHHHH
Confidence 4456666653 322334555666778888776443322222222 22 2355555 44422 5566655554
Q ss_pred -cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 -TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 -~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+..++-+....+.+. -.+.+++++..+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 1122566665543332222 246666666554
No 482
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.56 E-value=2.8e+02 Score=22.47 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=46.9
Q ss_pred CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCC
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTP 165 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~ 165 (398)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..|...+.. |-. |.+.+++.++. ...+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---D~~----~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM---DVA----DPASVERGFAEALAHLGRL 78 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEEC---CTT----CHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEe---cCC----CHHHHHHHHHHHHHHcCCC
Confidence 446666555444445566677788888775433222233334445444333 211 55666555542 1225
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 166 ~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.+++-+....+.+. -.+.+++++..+
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66665433222222 245566666554
No 483
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=24.51 E-value=1.4e+02 Score=24.62 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=34.7
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~ 160 (398)
...+++|.+++..=..+...|.+.|.+|++..- ......+..+.++..+ ..|-. |.+.+++.++
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~ 72 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFA-AADVT----DEAAVASALD 72 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEE-ECCTT----CHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEE-ECCCC----CHHHHHHHHH
Confidence 344666655544344556667778888776543 2334445556555555 44422 5555555544
No 484
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=24.44 E-value=50 Score=31.32 Aligned_cols=25 Identities=12% Similarity=0.096 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeece
Q 015890 182 PERLLKRISDLCKAAGSWLVVDNTY 206 (398)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~livDe~~ 206 (398)
+.++++++++.|+++|+.||+|-|+
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5788999999999999999999887
No 485
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.36 E-value=1.8e+02 Score=20.08 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=30.0
Q ss_pred hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (398)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (398)
.+...+.++.+. .++|++.+ + .|++....+..+|++++++++
T Consensus 20 ~~~v~kai~~gk-a~lViiA~--D-----~~~~~~~~i~~~c~~~~ip~~ 61 (99)
T 3j21_Z 20 SNETIRLAKTGG-AKLIIVAK--N-----APKEIKDDIYYYAKLSDIPVY 61 (99)
T ss_dssp HHHHHHHHHHTC-CSEEEEEC--C-----CCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCC-ccEEEEeC--C-----CCHHHHHHHHHHHHHcCCCEE
Confidence 456677777655 57777762 2 246678899999999999864
No 486
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=24.25 E-value=43 Score=23.41 Aligned_cols=21 Identities=19% Similarity=0.094 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHcCCEEEEeec
Q 015890 185 LLKRISDLCKAAGSWLVVDNT 205 (398)
Q Consensus 185 ~l~~i~~l~~~~~~~livDe~ 205 (398)
--++|.++++++|++++.|..
T Consensus 43 ~A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 43 RAKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHHcCCeEEECHH
Confidence 378999999999999999954
No 487
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=24.25 E-value=95 Score=27.44 Aligned_cols=38 Identities=5% Similarity=0.105 Sum_probs=20.8
Q ss_pred CeEEEEeCCCCCCc------cCCC----------HHHHHHHHHHHHHcCCEEEE
Q 015890 165 PKLVSVVNPGNPSG------TYIP----------ERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 165 ~~~v~i~~p~nptG------~~~~----------~~~l~~i~~l~~~~~~~liv 202 (398)
+++|+|.+++.... ..-+ ...+.++..+++++|+.+|+
T Consensus 140 ~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~ 193 (349)
T 2zr9_A 140 LDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIF 193 (349)
T ss_dssp CSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 68888887654331 0001 12345555566777776654
No 488
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=24.12 E-value=87 Score=27.29 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=0.0
Q ss_pred cCC-CCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 142 PCS-SKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 142 ~~~-~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
|.+ +++ .+|.+.+++.++ ... +..+++. .++--+..++.++..++++.+.+. .+.+|+
T Consensus 21 Pf~~~dg-~iD~~~l~~lv~~li~~G-v~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 21 FFDSKTD-TLDLASQERYYAYLARSG-LTGLVIL-GTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp CEETTTT-EECHHHHHHHHHHHHTTT-CSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CccCCCC-CCCHHHHHHHHHHHHHcC-CCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
No 489
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=24.09 E-value=1.2e+02 Score=25.86 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=31.8
Q ss_pred CCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015890 148 LHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (398)
Q Consensus 148 ~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~---~~~liv 202 (398)
..+|.+.+++.++ +.. +..+++. .++--+..++.++..++.+.+.+. .+++|+
T Consensus 16 g~iD~~~l~~lv~~li~~G-v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENG-VSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TEECHHHHHHHHHHHHHTT-CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHCC-CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3678887777765 222 4666654 333334567888888888776542 355543
No 490
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=24.07 E-value=3.1e+02 Score=22.74 Aligned_cols=99 Identities=11% Similarity=0.110 Sum_probs=51.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC-------hh---hHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN-------SY---MSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (398)
Q Consensus 88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~-------~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 157 (398)
....+++|.+++..=..+...|.+.|.+|++..-.-.. .. ...+..|.++..+ ..|-. |.+.+++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~ 79 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL-KCDIR----EEDQVRA 79 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE-ECCTT----CHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE-eCCCC----CHHHHHH
Confidence 34556666665444455666677888888775433221 11 2233446677666 55432 5566655
Q ss_pred hhc----cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 158 TLE----TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 158 ~l~----~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
.++ ....+..++-+......+. -.+.++++++.+
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 554 2122566665533222222 256666666554
No 491
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.06 E-value=3e+02 Score=22.82 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=49.4
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEe-CCCCcC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF-APYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---- 160 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~-~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---- 160 (398)
...+++|.+++..=..+...|.+.|.+|++. ...-.. ....++..|.++..+ ..|-. |.+.+++.++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~----~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA-QADVS----DPAAVRRLFATAEE 101 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEE-EcCCC----CHHHHHHHHHHHHH
Confidence 3456666555444445556677788888764 222211 122234456666665 44422 5566666554
Q ss_pred cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 161 TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 161 ~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
....+.+++-+....+.+. -.+.++++++.+
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1122566654433333222 245666666554
No 492
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=23.89 E-value=1.7e+02 Score=26.35 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=35.4
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...+..-.++.+.+ -++.. .-.+...++++.+ +-|+++=|- ..+.++.++|.++|++.|..+.+
T Consensus 85 y~d~~~ll~~~~vD~V~I-~tp~~---~H~~~~~~al~aG---khVl~EKP~-----a~~~~ea~~l~~~a~~~g~~~~v 152 (412)
T 4gqa_A 85 YGDWRELVNDPQVDVVDI-TSPNH---LHYTMAMAAIAAG---KHVYCEKPL-----AVNEQQAQEMAQAARRAGVKTMV 152 (412)
T ss_dssp ESSHHHHHHCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESCS-----CSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHHcC---CCeEeecCC-----cCCHHHHHHHHHHHHHhCCeeee
Confidence 344555555445555555 33211 1234444444433 455555442 23466677777777777766666
Q ss_pred ee
Q 015890 203 DN 204 (398)
Q Consensus 203 De 204 (398)
--
T Consensus 153 ~~ 154 (412)
T 4gqa_A 153 AF 154 (412)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 493
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.88 E-value=2.9e+02 Score=22.32 Aligned_cols=91 Identities=9% Similarity=0.054 Sum_probs=48.0
Q ss_pred EEEecChHHHHHHHHHHhccC---CCEEE-EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhccCCCCe
Q 015890 92 VMVTAGANQAFVNIVLTLCDA---GDSVV-MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPK 166 (398)
Q Consensus 92 v~~~~g~t~a~~~~~~~l~~~---gd~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~ 166 (398)
.++.+|+...+..++.+.... .+-++ +.+..-.+....++..|+.+..+.+.+-.+ .-+ -+++.+.++... +.
T Consensus 6 avl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~-r~~~d~~~~~~l~~~~-~D 83 (211)
T 3p9x_A 6 AIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPS-KEAYEIEVVQQLKEKQ-ID 83 (211)
T ss_dssp EEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSS-HHHHHHHHHHHHHHTT-CC
T ss_pred EEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCc-hhhhHHHHHHHHHhcC-CC
Confidence 355666656677777665332 22233 333222345567888998887662221110 000 124445555443 68
Q ss_pred EEEEeCCCCCCccCCCHHHHHH
Q 015890 167 LVSVVNPGNPSGTYIPERLLKR 188 (398)
Q Consensus 167 ~v~i~~p~nptG~~~~~~~l~~ 188 (398)
++++.. .|.+++++.++.
T Consensus 84 liv~ag----y~~Il~~~~l~~ 101 (211)
T 3p9x_A 84 FVVLAG----YMRLVGPTLLGA 101 (211)
T ss_dssp EEEESS----CCSCCCHHHHHH
T ss_pred EEEEeC----chhhcCHHHHhh
Confidence 888762 577888655433
No 494
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=23.82 E-value=1.5e+02 Score=25.95 Aligned_cols=69 Identities=12% Similarity=0.036 Sum_probs=39.4
Q ss_pred cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (398)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD 203 (398)
..+...+..-.++.+.+ -++.. .-.+...++++.+ +-|++.-| . ..+.++.++|.++|+++|+.+.+.
T Consensus 55 ~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP---~--a~~~~e~~~l~~~a~~~g~~~~v~ 122 (349)
T 3i23_A 55 ADLNELLTDPEIELITI-CTPAH---THYDLAKQAILAG---KSVIVEKP---F--CDTLEHAEELFALGQEKGVVVMPY 122 (349)
T ss_dssp SCTHHHHSCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSC---S--CSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCHHHHhcCCCCCEEEE-eCCcH---HHHHHHHHHHHcC---CEEEEECC---C--cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34455554445566655 33221 1345555556543 55665543 2 245777888888888888887765
Q ss_pred e
Q 015890 204 N 204 (398)
Q Consensus 204 e 204 (398)
-
T Consensus 123 ~ 123 (349)
T 3i23_A 123 Q 123 (349)
T ss_dssp C
T ss_pred e
Confidence 3
No 495
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=23.76 E-value=1.3e+02 Score=25.63 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=38.8
Q ss_pred hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC--HHHHHHHHHHHHHcCCEEEEeec
Q 015890 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP--ERLLKRISDLCKAAGSWLVVDNT 205 (398)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~--~~~l~~i~~l~~~~~~~livDe~ 205 (398)
..+-..|..++.. -+.+++++.... ..+++|. .|...+ .+.+....+.+++++.++|+|-+
T Consensus 34 N~~La~GasP~M~---------~~~~e~~e~~~~---a~alvIn-----~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPV 96 (273)
T 3dzv_A 34 NALLYIDAKPIMA---------DDPREFPQMFQQ---TSALVLN-----LGHLSQEREQSLLAASDYARQVNKLTVVDLV 96 (273)
T ss_dssp HHHHHTTCEEECC---------CCGGGHHHHHTT---CSEEEEE-----CCSCCHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred HHHHHcCCchhhc---------CCHHHHHHHHHH---CCeEEEe-----cCCCChHHHHHHHHHHHHHHHcCCcEEEchh
Confidence 3456678877654 146677777763 3677766 445322 23455555667888999999954
Q ss_pred e
Q 015890 206 Y 206 (398)
Q Consensus 206 ~ 206 (398)
-
T Consensus 97 g 97 (273)
T 3dzv_A 97 G 97 (273)
T ss_dssp T
T ss_pred h
Confidence 3
No 496
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=23.69 E-value=3.2e+02 Score=22.72 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=47.8
Q ss_pred CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----c
Q 015890 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (398)
Q Consensus 89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~ 161 (398)
...+++|.++...=..+...|.+.|.+|++..-.-..... .++..|.++..+ ..|-. |.+.+++.++ .
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR-TCDVR----SVPEIEALVAAVVER 96 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE-ECCCC----CHHHHHHHHHHHHHH
Confidence 3456666555444445566677788888765433222221 222335555555 44322 5566655554 2
Q ss_pred CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015890 162 KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (398)
Q Consensus 162 ~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~ 191 (398)
...+.+++-+......+. -.+.++++++.+
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 222566665533222222 245555555544
No 497
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=23.67 E-value=1.7e+02 Score=26.02 Aligned_cols=22 Identities=14% Similarity=-0.133 Sum_probs=13.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhcc
Q 015890 366 VEDDCKAAADRLRRGLEELVKD 387 (398)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~~ 387 (398)
+.++-.+.++.+..+.+...++
T Consensus 361 ~~e~a~~~l~v~eA~~~Sa~~g 382 (387)
T 3moi_A 361 DARWGKDTLEVCLAVLESSATG 382 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhhhcC
Confidence 5666666666666665554443
No 498
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=23.63 E-value=1.9e+02 Score=24.34 Aligned_cols=99 Identities=17% Similarity=0.087 Sum_probs=49.3
Q ss_pred CcEEEecChHHHHHHHHHHhccCC-CEEEEeCCCCcCh-hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE
Q 015890 90 SSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNS-YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (398)
Q Consensus 90 ~~v~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~ 167 (398)
..|++|.++...=..++..|.+.| .+|.+..-.-... ...+...|++++.. +. -|.+.+++.++. +..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~-D~------~d~~~l~~~~~~---~d~ 75 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQG-DQ------DDQVIMELALNG---AYA 75 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEEC-CT------TCHHHHHHHHTT---CSE
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEe-cC------CCHHHHHHHHhc---CCE
Confidence 346666553333334555565556 6666543221111 12234456666554 22 267888888874 466
Q ss_pred EEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCC
Q 015890 168 VSVVNPGNPS-GTYIPERLLKRISDLCKAAGS 198 (398)
Q Consensus 168 v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~ 198 (398)
|+...+..+. ...........+++.|++.|+
T Consensus 76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv 107 (299)
T 2wm3_A 76 TFIVTNYWESCSQEQEVKQGKLLADLARRLGL 107 (299)
T ss_dssp EEECCCHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeCCCCccccchHHHHHHHHHHHHHHHcCC
Confidence 6654321100 000112235677788887775
No 499
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=23.63 E-value=52 Score=28.79 Aligned_cols=22 Identities=18% Similarity=0.380 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEee
Q 015890 183 ERLLKRISDLCKAAGSWLVVDN 204 (398)
Q Consensus 183 ~~~l~~i~~l~~~~~~~livDe 204 (398)
.+.+.+++++|.++|+.+|+|-
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 4568999999999999999994
No 500
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=23.55 E-value=1.4e+02 Score=26.40 Aligned_cols=71 Identities=18% Similarity=0.102 Sum_probs=42.5
Q ss_pred CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (398)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv 202 (398)
|..+...+..-.++.+.+ -++.. .-.+....+++.+ +-|++.-|- ..+.++.++|.++|++.|+.+.+
T Consensus 54 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKP~-----a~~~~ea~~l~~~a~~~g~~~~v 121 (362)
T 3fhl_A 54 VRSFKELTEDPEIDLIVV-NTPDN---THYEYAGMALEAG---KNVVVEKPF-----TSTTKQGEELIALAKKKGLMLSV 121 (362)
T ss_dssp ESCSHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CeEEEecCC-----CCCHHHHHHHHHHHHHcCCEEEE
Confidence 344555555545666666 33321 1245555666543 566666542 24577788888888888888877
Q ss_pred eec
Q 015890 203 DNT 205 (398)
Q Consensus 203 De~ 205 (398)
--.
T Consensus 122 ~~~ 124 (362)
T 3fhl_A 122 YQN 124 (362)
T ss_dssp ECG
T ss_pred Eec
Confidence 543
Done!