BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015894
(398 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis
thaliana GN=HMGCL PE=1 SV=2
Length = 468
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/363 (71%), Positives = 302/363 (83%), Gaps = 10/363 (2%)
Query: 46 YTREKTISRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVP 95
+TR+ + RN+S + ++G L ++ YS+ +N T +++K+ +P
Sbjct: 106 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIP 165
Query: 96 GFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKD 155
FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGL VVEATSFVSPKWVPQLADAKD
Sbjct: 166 KFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKD 225
Query: 156 VMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRY 215
VM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RY
Sbjct: 226 VMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRY 285
Query: 216 RDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT 275
R VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GT
Sbjct: 286 RVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGT 345
Query: 276 PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAK 335
PG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQMGIS VDSS++GLGGCPYAK
Sbjct: 346 PGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQMGISIVDSSIAGLGGCPYAK 405
Query: 336 GASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTSTANA 395
GASGNVATEDVVYMLNGLGV TNVD+ KL+ AGDFI KHLGR +GSK A+AL++ TA+A
Sbjct: 406 GASGNVATEDVVYMLNGLGVHTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRRITADA 465
Query: 396 SKL 398
SK+
Sbjct: 466 SKI 468
>sp|P97519|HMGCL_RAT Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus
GN=Hmgcl PE=2 SV=1
Length = 325
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 237/299 (79%)
Query: 91 LGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQL 150
+G +P VKIVEVGPRDGLQNEK+IVP VK++LI +L +GL V+EATSFVSPKWVPQ+
Sbjct: 26 MGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQM 85
Query: 151 ADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIED 210
AD DV+ IQ G +PVLTPN+KGFE AVAAGAKEV+IF +ASE F++ N+NC+IE+
Sbjct: 86 ADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSIFGAASELFTRKNVNCSIEE 145
Query: 211 SLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270
S R+ V AAR SI VRGY+SC +GCP EG V P+KVA V+K+LY MGC EISLGDT
Sbjct: 146 SFQRFDGVMQAARAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDT 205
Query: 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330
IGVGTPG + ML AVL VPV LAVH HDTYGQAL+N L +LQMG+S VDSSV+GLGG
Sbjct: 206 IGVGTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQALANTLVALQMGVSVVDSSVAGLGG 265
Query: 331 CPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK 389
CPYAKGASGN+ATED+VYML GLG+ T V+++KL+ AGDFIC+ L R + SK A A K
Sbjct: 266 CPYAKGASGNLATEDLVYMLTGLGIHTGVNLQKLLEAGDFICQALNRKTSSKVAQATCK 324
>sp|Q29448|HMGCL_BOVIN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus
GN=HMGCL PE=2 SV=2
Length = 325
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 237/299 (79%)
Query: 91 LGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQL 150
+G P VKIVEVGPRDGLQNEKNIVP VK++LI +L +GL VVEATSFVSPKWVPQ+
Sbjct: 26 VGTFPKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQM 85
Query: 151 ADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIED 210
AD +V+ IQ G +PVLTPN KGF+AAVAAGAKEVAIF +ASE F+K NINC+I++
Sbjct: 86 ADHAEVLKGIQKFPGVNYPVLTPNFKGFQAAVAAGAKEVAIFGAASELFTKKNINCSIDE 145
Query: 211 SLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270
SL R+ ++ AAR I VRGY+SCV+GCP EG + P+KVA V+K+LY MGC EISLGDT
Sbjct: 146 SLQRFDEILKAARAAGISVRGYVSCVLGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDT 205
Query: 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330
IGVGTPG + ML AVL VPV LAVH HDTYGQAL+N L +LQMG+S +DSSV+GLGG
Sbjct: 206 IGVGTPGAMKDMLSAVLQEVPVTALAVHCHDTYGQALANTLTALQMGVSVMDSSVAGLGG 265
Query: 331 CPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK 389
CPYA+GASGN+ATED+VYML GLG+ T V+++KL+ AG FIC+ L R + SK A A K
Sbjct: 266 CPYAQGASGNLATEDLVYMLAGLGIHTGVNLQKLLEAGAFICQALNRRTNSKVAQATCK 324
>sp|Q8JZS7|HMGC2_MOUSE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus
musculus GN=Hmgcll1 PE=2 SV=1
Length = 343
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/299 (64%), Positives = 242/299 (80%), Gaps = 1/299 (0%)
Query: 88 SKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWV 147
S+L G +P +VKIVEVGPRDGLQNEK IVP +K+ELI L +GL+V+E TSFVS +WV
Sbjct: 39 SQLPG-LPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWV 97
Query: 148 PQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCT 207
PQ+AD +VM I+ G R+PVLTPNL+GF+ AVAAGA E+A+F +ASESFSK NINC+
Sbjct: 98 PQMADHAEVMRGIRQYPGVRYPVLTPNLQGFQHAVAAGATEIAVFGAASESFSKKNINCS 157
Query: 208 IEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISL 267
IE+S+ R+++V +AR + IPVRGY+SC +GCP EG + P KV VSK+LY MGC EISL
Sbjct: 158 IEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISL 217
Query: 268 GDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327
GDTIGVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQMGI+ VDS+VSG
Sbjct: 218 GDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSG 277
Query: 328 LGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIA 386
LGGCPYAKGASGNVATED++YMLNG+G+ T VD+ K+M AG+FICK + +T+ SK A A
Sbjct: 278 LGGCPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKVMEAGEFICKAVNKTTNSKVAQA 336
>sp|P38060|HMGCL_MOUSE Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus
GN=Hmgcl PE=1 SV=2
Length = 325
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/309 (63%), Positives = 240/309 (77%)
Query: 81 NSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATS 140
S + +++ +G +P VKIVEVGPRDGLQNEK+IVP VK+ LI +L +GL V+EATS
Sbjct: 16 TSLRAVSTSSMGTLPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATS 75
Query: 141 FVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFS 200
FVSPKWVPQ+AD DV+ IQ G +PVLTPN+KGFE AVAAGAKEV++F + SE F+
Sbjct: 76 FVSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSVFGAVSELFT 135
Query: 201 KSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDM 260
+ N NC+IE+S R+ V AA+ SI VRGY+SC +GCP EG V P+KVA V+K+LY M
Sbjct: 136 RKNANCSIEESFQRFAGVMQAAQAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSM 195
Query: 261 GCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGIST 320
GC EISLGDTIGVGTPG + ML AV+ VPV LAVH HDTYGQAL+N L +LQMG+S
Sbjct: 196 GCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQALANTLVALQMGVSV 255
Query: 321 VDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSG 380
VDSSV+GLGGCPYAKGASGN+ATED+VYMLNGLG+ T V+++KL+ AGDFIC+ L R +
Sbjct: 256 VDSSVAGLGGCPYAKGASGNLATEDLVYMLNGLGIHTGVNLQKLLEAGDFICQALNRKTS 315
Query: 381 SKTAIALSK 389
SK A A K
Sbjct: 316 SKVAQATCK 324
>sp|Q8TB92|HMGC2_HUMAN 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo
sapiens GN=HMGCLL1 PE=1 SV=3
Length = 370
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/300 (64%), Positives = 239/300 (79%), Gaps = 1/300 (0%)
Query: 87 TSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKW 146
TS+L G +P FVKIVEVGPRDGLQNEK IVP +K+E I L +GL+V+E TSFVS +W
Sbjct: 68 TSQLSG-LPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRW 126
Query: 147 VPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINC 206
VPQ+AD +VM I G R+PVLTPNL+GF AVAAGA E+++F +ASESFSK NINC
Sbjct: 127 VPQMADHTEVMKGIHQYPGVRYPVLTPNLQGFHHAVAAGATEISVFGAASESFSKKNINC 186
Query: 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEIS 266
+IE+S+ ++ +V +AR ++IP RGY+SC +GCP EG + P KV VSK+LY MGC EIS
Sbjct: 187 SIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEIS 246
Query: 267 LGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326
LGDTIGVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQMGI+ VDS+VS
Sbjct: 247 LGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVS 306
Query: 327 GLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIA 386
GLGGCPYAKGASGNVATED++YMLNGLG+ T V++ K+M AGDFICK + +T+ SK A A
Sbjct: 307 GLGGCPYAKGASGNVATEDLIYMLNGLGLNTGVNLYKVMEAGDFICKAVNKTTNSKVAQA 366
>sp|P35915|HMGCL_CHICK Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus
GN=HMGCL PE=1 SV=1
Length = 298
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/295 (65%), Positives = 236/295 (80%)
Query: 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAK 154
P VK+VEVGPRDGLQNEK++VP VK+ LI +L +GL V+EATSFVSP+WVPQ+AD
Sbjct: 3 PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHA 62
Query: 155 DVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR 214
+VM I + G +PVLTPNLKGF+AAVAAGAKEV+IF +ASE F+K NINC+IE+SL R
Sbjct: 63 EVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLER 122
Query: 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
+ +V AAR SIPVRGY+SCV+GCP EG + +KVA VSK++Y MGC EISLGD IG+G
Sbjct: 123 FSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGIG 182
Query: 275 TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYA 334
TPG++ ML AV+ VPV LAVH HDTYGQAL+NIL +LQMG+S VD+SV+GLGGCPYA
Sbjct: 183 TPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANILVALQMGVSVVDASVAGLGGCPYA 242
Query: 335 KGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSK 389
+GASGNVATED+VYMLNGLG+ T VD++KLM G FIC L R + SK + A +
Sbjct: 243 QGASGNVATEDLVYMLNGLGIHTGVDLQKLMDTGTFICNALNRRTNSKVSQAACR 297
>sp|D4A5C3|HMGC2_RAT 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcll1 PE=1 SV=1
Length = 343
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 234/296 (79%)
Query: 91 LGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQL 150
L +P +VKIVEVGPRDGLQNEK IVP +K+E I L +GL+V+E TSFVS +WVPQ+
Sbjct: 41 LSGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIEFINQLSQTGLSVIEVTSFVSSRWVPQM 100
Query: 151 ADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIED 210
AD +VM I G R+PVL PNL+G + AVAAGA E+A+F +ASESFSK NINC+IE+
Sbjct: 101 ADHAEVMGGIHQYPGVRYPVLVPNLQGLQHAVAAGATEIAVFGAASESFSKKNINCSIEE 160
Query: 211 SLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDT 270
S+ R+ V +AR ++IPVRGY+SC +GCP EG + P KV VSK+LY MGC EISLGDT
Sbjct: 161 SMGRFEQVISSARHMNIPVRGYVSCALGCPYEGSIMPQKVTEVSKRLYSMGCYEISLGDT 220
Query: 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330
+GVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQMGI+ VDS+VSGLGG
Sbjct: 221 VGVGTPGSMKTMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGG 280
Query: 331 CPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIA 386
CPYAKGASGNVATED++YMLNG+G+ T VD+ K+M AGDFICK + +T+ SK A A
Sbjct: 281 CPYAKGASGNVATEDLIYMLNGMGLNTGVDLHKVMEAGDFICKAVNKTTNSKVAQA 336
>sp|Q5R9E1|HMGCL_PONAB Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii
GN=HMGCL PE=2 SV=1
Length = 325
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 241/308 (78%)
Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSF 141
S + +++ +G +P VKIVEVGPRDGLQNEKNIV VK++LI +L +GL+V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 142 VSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201
VSPKWVPQ+ D +V+ IQ G +PVLTPNLKGFEAAVAAGAKEVAIF +ASE F+K
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVAIFGAASELFTK 136
Query: 202 SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261
NINC+IE+S R+ + AA+ +I VRGY+SC +GCP EG + P+KVA V+K+LY MG
Sbjct: 137 KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKLYSMG 196
Query: 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321
C EISLGDTIGVGTPG + ML AV+ VP+ LAVH HDTYGQAL+N L +LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVV 256
Query: 322 DSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGS 381
DSSV+GLGGCPYA+GASGN+ATED+VYML GLG+ T V+++KL+ AG+FIC+ L R + S
Sbjct: 257 DSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316
Query: 382 KTAIALSK 389
K A A K
Sbjct: 317 KVAQATCK 324
>sp|P35914|HMGCL_HUMAN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens
GN=HMGCL PE=1 SV=2
Length = 325
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/308 (62%), Positives = 239/308 (77%)
Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSF 141
S + +++ +G +P VKIVEVGPRDGLQNEKNIV VK++LI +L +GL+V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 142 VSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201
VSPKWVPQ+ D +V+ IQ G +PVLTPNLKGFEAAVAAGAKEV IF +ASE F+K
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTK 136
Query: 202 SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261
NINC+IE+S R+ + AA+ +I VRGY+SC +GCP EG + P+KVA V+K+ Y MG
Sbjct: 137 KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG 196
Query: 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321
C EISLGDTIGVGTPG + ML AV+ VP+ LAVH HDTYGQAL+N L +LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVV 256
Query: 322 DSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGS 381
DSSV+GLGGCPYA+GASGN+ATED+VYML GLG+ T V+++KL+ AG+FIC+ L R + S
Sbjct: 257 DSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316
Query: 382 KTAIALSK 389
K A A K
Sbjct: 317 KVAQATCK 324
>sp|Q8HXZ6|HMGCL_MACFA Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca
fascicularis GN=HMGCL PE=2 SV=1
Length = 325
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/308 (62%), Positives = 240/308 (77%)
Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSF 141
S + +++ + +P VKIVEVGPRDGLQNEKNIV VK++LI +L +GL+V+EATSF
Sbjct: 17 SLRAVSTSSMDTLPKQVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIEATSF 76
Query: 142 VSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSK 201
VSPKWVPQ+AD +V+ IQ G +PVL PNLKGFEAAVAAGAKEV+IF +ASE F+K
Sbjct: 77 VSPKWVPQMADHAEVLKGIQKFPGITYPVLIPNLKGFEAAVAAGAKEVSIFGAASELFTK 136
Query: 202 SNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261
N+NC+IE+S R+ + AA+ +I VRGY+SCV+GCP EG + P+KVA V+K+ Y MG
Sbjct: 137 KNVNCSIEESFQRFDAILKAAQSANISVRGYVSCVLGCPYEGKISPAKVAEVTKKFYSMG 196
Query: 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTV 321
C EISLGDTIGVGTPG + ML AV+ VP LAVH HDTYGQAL+N L +LQMG+S V
Sbjct: 197 CYEISLGDTIGVGTPGIMKDMLSAVMQEVPPAALAVHCHDTYGQALANTLMALQMGVSVV 256
Query: 322 DSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGS 381
DSSV+GLGGCPYA+GASGN+ATED+VYML GLG+ T V+++KL+ AG+FIC+ L R + S
Sbjct: 257 DSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316
Query: 382 KTAIALSK 389
K A A K
Sbjct: 317 KVAQATCK 324
>sp|A8WG57|HMGC2_DANRE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio
rerio GN=hmgcll1 PE=2 SV=1
Length = 335
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/319 (59%), Positives = 241/319 (75%), Gaps = 10/319 (3%)
Query: 68 YLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKL 127
+L + + C++ L ++P +VKIVEVGPRDGLQNEK IVP VK++LI L
Sbjct: 23 WLPRLLWEEKCSE----------LPKLPVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDL 72
Query: 128 LVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAK 187
L +GL V+EATSFVS KWV Q+AD V+ I+ R+PVLTPN++GF+AAVAAGA
Sbjct: 73 LSQTGLPVIEATSFVSSKWVAQMADHTAVLKGIKRSPDVRYPVLTPNIQGFQAAVAAGAN 132
Query: 188 EVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPP 247
EVA+F SASE+FS+ NINC+IE+SL R+ V AA++ IPVRGY+SC +GCP EG V P
Sbjct: 133 EVAVFGSASETFSRKNINCSIEESLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQVKP 192
Query: 248 SKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQAL 307
S+V V+K+L+++GC E+SLGDTIGVGT G++ ML VL VP LAVH HDTYGQAL
Sbjct: 193 SQVTKVAKRLFELGCYEVSLGDTIGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYGQAL 252
Query: 308 SNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIA 367
NIL +LQMG+S VD+SV+GLGGCP+AKGASGNV+TED++YML+GLG+ T VD+ K+M A
Sbjct: 253 PNILIALQMGVSVVDASVAGLGGCPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKVMEA 312
Query: 368 GDFICKHLGRTSGSKTAIA 386
GDFICK L R + SK + A
Sbjct: 313 GDFICKALNRKTNSKVSQA 331
>sp|P13703|HMGCL_PSEMV Hydroxymethylglutaryl-CoA lyase OS=Pseudomonas mevalonii GN=mvaB
PE=3 SV=1
Length = 301
Score = 297 bits (761), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 204/294 (69%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
VK+ EVGPRDGLQNE+ + +V LI L +GL +EA +FVSP+WVPQ+A + +V+
Sbjct: 4 VKVFEVGPRDGLQNERQPLSVAARVGLIGELAGTGLRHIEAGAFVSPRWVPQMAGSDEVL 63
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRD 217
+ + +G + L PN +GFEAA AG +EVA+FA+ASE+FS++NINC+I++S R+
Sbjct: 64 RQLPSNDGVSYTALVPNRQGFEAAQRAGCREVAVFAAASEAFSRNNINCSIDESFERFTP 123
Query: 218 VALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPG 277
V AA E SI VRGY+SCV+GCP G V P VA V+++LY++GC EISLGDTIG G P
Sbjct: 124 VLRAANEASIRVRGYVSCVLGCPFSGAVAPEAVAKVARRLYELGCYEISLGDTIGAGRPD 183
Query: 278 TVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGA 337
+ E +PV LA HFHDT+G A++N+ A+L G+ T DSSV+GLGGCPY+ GA
Sbjct: 184 ETAQLFELCARQLPVAALAGHFHDTWGMAIANVHAALAQGVRTFDSSVAGLGGCPYSPGA 243
Query: 338 SGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGRTSGSKTAIALSKTS 391
SGNVATED++Y+L+GLG T VD+ + G I LG + S+ +AL+ S
Sbjct: 244 SGNVATEDLLYLLHGLGYSTGVDLEAVAQVGVRISAQLGTANRSRAGLALAARS 297
>sp|O34873|HMGCL_BACSU Hydroxymethylglutaryl-CoA lyase YngG OS=Bacillus subtilis (strain
168) GN=yngG PE=1 SV=1
Length = 299
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 180/283 (63%)
Query: 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAK 154
P V I EVGPRDGLQNE + K+ I L +GL+ +E TSFV PKW+P L DA
Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAI 63
Query: 155 DVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR 214
DV I +G + L PN +G E A+ G E +F SASE+ ++ NIN + +SL
Sbjct: 64 DVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHI 123
Query: 215 YRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
+ V A++ ++ R YLS V GCP E VP +V +S+ L++ G SE+SLGDTIG
Sbjct: 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAA 183
Query: 275 TPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYA 334
P V +LEA+L P +++A+HFHDT G AL+N++ +LQMGI+ D S GLGGCPYA
Sbjct: 184 NPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYA 243
Query: 335 KGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHLGR 377
G+SGN ATED+VYML + ++TNV + KL+ A +I + +G+
Sbjct: 244 PGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGK 286
>sp|Q3ACM0|HOA_CARHZ 4-hydroxy-2-oxovalerate aldolase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mhpE PE=3
SV=1
Length = 336
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 222 ARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIP 281
A+EL + G+L + MVPP K+ +K G + + D+ G TP V
Sbjct: 125 AKELGMEAIGFLM------MSHMVPPEKLVEQAKLFESYGADAVYITDSAGAMTPYDVKV 178
Query: 282 MLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNV 341
+EAV AV V + H H+ G A+ N LA+++ G + VD + GLG +GN
Sbjct: 179 RIEAVKAAVSV-PVGFHAHNNLGLAIGNTLAAIEAGATYVDGTARGLG------AGAGNS 231
Query: 342 ATEDVVYMLNGLGVRTNVDIRKLM 365
TE +V +L LG T VD+ K+M
Sbjct: 232 QTEILVAVLAKLGYETGVDLYKIM 255
>sp|Q8ZW35|LEU1_PYRAE Probable 2-isopropylmalate synthase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=leuA PE=3 SV=1
Length = 364
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG 238
+AA A + +F + S+ K + T E++L R +V A+ + +
Sbjct: 65 DAAAEADVDMIHLFIATSDIHLKYKLGITREEALRRIEEVVSYAKSYGVEILFSAEDATR 124
Query: 239 CPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVH 298
+E + K A + G EI++ DT+GV TP + +++ + + +P + VH
Sbjct: 125 SDLEFLAKAYKTAI------EAGADEINVPDTVGVMTPSRMAYLIKYLRERLPPIPMHVH 178
Query: 299 FHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNG-LGVRT 357
HD +G A++N + +++ G V+ G +GN A E+VV ++ LG+RT
Sbjct: 179 CHDDFGMAVANTVTAIENGADVAQVVVNNFG------ERAGNAALEEVVAAVHYLLGLRT 232
Query: 358 NVDIRKLMIAGDFICKHLG 376
N+ + KL + K G
Sbjct: 233 NIKLEKLYSLSQLVSKLFG 251
>sp|Q764S0|HOA_BACPJ 4-hydroxy-2-oxovalerate aldolase OS=Bacillus sp. (strain JF8)
GN=nahM PE=3 SV=2
Length = 337
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 19/157 (12%)
Query: 222 ARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIP 281
A+EL + G+L M+ P ++A +K + G + + D+ G P VI
Sbjct: 126 AKELGLETVGFLMMA------HMLSPEELAQQAKLMESYGADIVYIVDSAGTMLPQDVID 179
Query: 282 M---LEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGAS 338
L+ VL+ VP+ H H+ G A+ N LA++Q G + +D+S GLG S
Sbjct: 180 RVIALKKVLN-VPI---GFHAHNNLGLAIGNSLAAIQAGATNIDASTRGLG------AGS 229
Query: 339 GNVATEDVVYMLNGLGVRTNVDIRKLMIAGDFICKHL 375
GN TE +V +L+ +G+ T +D+ ++M A ++I L
Sbjct: 230 GNTQTEVLVAVLSRMGIETGIDLFQIMDAAEYIVDPL 266
>sp|B8I1T7|LEU1_CLOCE 2-isopropylmalate synthase OS=Clostridium cellulolyticum (strain
ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=leuA PE=3
SV=1
Length = 508
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 29/264 (10%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEA-TSFVSPKWVPQLADAKDV 156
+KI + RDG Q + K+E+ K LV G+ V+E + SP D + +
Sbjct: 5 IKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASP------GDFESI 58
Query: 157 MAAIQNVEGARFPVLTPNL-----KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDS 211
M +N++G L ++ + +EA A + + F + S+ K + T E+
Sbjct: 59 MTLSRNLKGVTIASLCRSVEKDIDRAWEAVQYAESPRIHTFIATSDIHMKYKLKMTEEEV 118
Query: 212 LIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY-VSKQLYDMGCSEISLGDT 270
L R V++ R +GY S V + + Y V + + G + +++ DT
Sbjct: 119 L--ERAVSMVKR-----AKGYCSNVEFSAEDASRTREEFLYRVVEAVIKAGATTVNIPDT 171
Query: 271 IGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSG 327
+G TP ++ + + VP +DK ++VH H+ G A++N LA+++ G V+ +++G
Sbjct: 172 VGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHNDLGLAVANSLAAVENGAVQVECTING 231
Query: 328 LGGCPYAKGASGNVATEDVVYMLN 351
LG +GN A E+++ +N
Sbjct: 232 LG------ERAGNAALEEIIMGIN 249
>sp|Q2RHL3|HOA_MOOTA 4-hydroxy-2-oxovalerate aldolase OS=Moorella thermoacetica (strain
ATCC 39073) GN=Moth_1775 PE=3 SV=1
Length = 338
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 244 MVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTY 303
M PP KV +K G I++ D+ G P V + AV++AV V + H H+
Sbjct: 142 MAPPEKVVEQAKLFESYGADYINIADSAGAMLPEDVKARVGAVVEAVKV-PVGFHAHNNL 200
Query: 304 GQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRK 363
A +N LA+++ G + +D + GLG +GN TE +V +L+ LG RT VD K
Sbjct: 201 TMATANALAAVEAGATFLDGACRGLGA------GAGNAQTEALVGVLDKLGYRTGVDFYK 254
Query: 364 LM-IAGDFI 371
+M +A D +
Sbjct: 255 VMDVAEDIV 263
>sp|Q5E856|LEU1_VIBF1 2-isopropylmalate synthase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=leuA PE=3 SV=1
Length = 515
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 31/275 (11%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVK 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCT----IEDSLI 213
Q+++ +R + G AVA A +E+F T ++D L
Sbjct: 60 TIAQHIKNSR-------ICGLSRAVAKDIDAAAEALKVAEAFRIHTFISTSTVHVQDKLR 112
Query: 214 R-YRDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI 271
R Y DV + R Y V C G P + + + D G + I++ DT+
Sbjct: 113 RSYDDVVEMGVKAVKHARKYTDDVEFSCEDAGRTPIDNLCRMVEAAIDAGANTINIPDTV 172
Query: 272 GVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328
G PG +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++G+
Sbjct: 173 GYTVPGEFGGIVQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTINGI 232
Query: 329 GGCPYAKGASGNVATEDVVYMLNG----LGVRTNV 359
G +GN + E++ +L LGV TN+
Sbjct: 233 G------ERAGNCSLEEIAMILKTRSEYLGVHTNL 261
>sp|P58898|LEU1_BUCPS 2-isopropylmalate synthase OS=Buchnera aphidicola subsp. Pemphigus
spyrothecae GN=leuA PE=3 SV=1
Length = 515
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 239 CPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--L 295
C G P +++ Y+ + + G + I++ DT+G P +++++ + VP +DK L
Sbjct: 140 CEDAGRTPINQLCYIVENVIKAGATTINIPDTVGFTIPYEFNQIIKSLYNKVPNIDKVIL 199
Query: 296 AVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYML----N 351
+VH H+ G A +N + ++Q G ++ +++G+G +GN A E+V+ + N
Sbjct: 200 SVHCHNGLGMATANSITAIQAGARQIEXTMNGMG------ERAGNTALEEVIIAIKLKKN 253
Query: 352 GLGVRTNVDIRKL 364
L + TN+ +K+
Sbjct: 254 NLNLHTNIKHKKI 266
>sp|B5FGH4|LEU1_VIBFM 2-isopropylmalate synthase OS=Vibrio fischeri (strain MJ11) GN=leuA
PE=3 SV=1
Length = 515
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 31/275 (11%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVR 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCT----IEDSLI 213
Q+++ +R + G AVA A +E+F T ++D L
Sbjct: 60 TIAQHIKNSR-------ICGLSRAVAKDIDAAAEALKVAEAFRIHTFISTSTVHVQDKLR 112
Query: 214 R-YRDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTI 271
R Y DV + R Y V C G P + + + + G + I++ DT+
Sbjct: 113 RSYDDVVEMGVKAVKHARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGANTINIPDTV 172
Query: 272 GVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328
G PG +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++G+
Sbjct: 173 GYTVPGEFGGIVQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTINGI 232
Query: 329 GGCPYAKGASGNVATEDVVYMLNG----LGVRTNV 359
G +GN + E++ +L LGV TN+
Sbjct: 233 G------ERAGNCSLEEIAMILKTRSEYLGVHTNL 261
>sp|Q7MP77|LEU1_VIBVY 2-isopropylmalate synthase OS=Vibrio vulnificus (strain YJ016)
GN=leuA PE=3 SV=1
Length = 515
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESF------SKSNINCTIEDS 211
+N++ +R L+ + E + A A+ + + +E+F S S I+ ++D
Sbjct: 60 TIARNIKNSRVCALS---RAVEKDIDAAAEALKV----AEAFRIHTFISTSTIH--VQDK 110
Query: 212 LIR-YRDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269
L R Y DV R Y V C G P + + + + G I++ D
Sbjct: 111 LRRSYDDVVEMGVRAVKHARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPD 170
Query: 270 TIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVS 326
T+G P +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTIN 230
Query: 327 GLGGCPYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKL 364
G+G +GN + E++ ++ LGVRT ++ ++
Sbjct: 231 GIG------ERAGNCSLEEIAMIIKTRQELLGVRTGINHEEI 266
>sp|Q8DEE1|LEU1_VIBVU 2-isopropylmalate synthase OS=Vibrio vulnificus (strain CMCP6)
GN=leuA PE=3 SV=1
Length = 515
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 35/282 (12%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPVSSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESF------SKSNINCTIEDS 211
+N++ +R L+ + E + A A+ + + +E+F S S I+ ++D
Sbjct: 60 TIARNIKNSRVCALS---RAVEKDIDAAAEALKV----AEAFRIHTFISTSTIH--VQDK 110
Query: 212 LIR-YRDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGD 269
L R Y DV R Y V C G P + + + + G I++ D
Sbjct: 111 LRRSYDDVVEMGVRAVKHARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPD 170
Query: 270 TIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVS 326
T+G P +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++
Sbjct: 171 TVGYTVPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTIN 230
Query: 327 GLGGCPYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKL 364
G+G +GN + E++ ++ LGVRT ++ ++
Sbjct: 231 GIG------ERAGNCSLEEIAMIIKTRQELLGVRTGINHEEI 266
>sp|C3LR32|LEU1_VIBCM 2-isopropylmalate synthase OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=leuA PE=3 SV=1
Length = 516
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ ++EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNL-KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-Y 215
+N++ +R L+ + K +AA A A +VA S S I+ ++D L R Y
Sbjct: 60 TIAKNIKNSRVCALSRAVAKDIDAA--AEALKVAEAFRIHTFISTSTIH--VQDKLRRSY 115
Query: 216 RDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
DV A + R Y V C G P + + + + G I++ DT+G
Sbjct: 116 DDVVAMAVKAVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYT 175
Query: 275 TPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGC 331
P +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++G+G
Sbjct: 176 VPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGTINGIG-- 233
Query: 332 PYAKGASGNVATEDVVYMLNG----LGVRTNV 359
+GN A E++ ++ LGV T +
Sbjct: 234 ----ERAGNCALEEIAMIIKTRQELLGVTTGI 261
>sp|Q9KP83|LEU1_VIBCH 2-isopropylmalate synthase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=leuA PE=3 SV=1
Length = 516
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ ++EA VS D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNL-KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-Y 215
+N++ +R L+ + K +AA A A +VA S S I+ ++D L R Y
Sbjct: 60 TIAKNIKNSRVCALSRAVAKDIDAA--AEALKVAEAFRIHTFISTSTIH--VQDKLRRSY 115
Query: 216 RDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
DV A + R Y V C G P + + + + G I++ DT+G
Sbjct: 116 DDVVAMAVKAVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYT 175
Query: 275 TPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGC 331
P +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++G+G
Sbjct: 176 VPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGTINGIG-- 233
Query: 332 PYAKGASGNVATEDVVYMLNG----LGVRTNV 359
+GN A E++ ++ LGV T +
Sbjct: 234 ----ERAGNCALEEIAMIIKTRQELLGVTTGI 261
>sp|C5B7R4|LEU1_EDWI9 2-isopropylmalate synthase OS=Edwardsiella ictaluri (strain 93-146)
GN=leuA PE=3 SV=1
Length = 526
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 208 IEDSLIRYRDVALA-ARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
+E L R D A+A AR + R Y V C G P + + + D G +
Sbjct: 107 LESKLRRSFDDAIAMARHAILRARRYTDDVEFSCEDAGRTPIDNLCRIVEAAIDAGAKTV 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + + VP +DK ++VH HD G A +N ++++Q G V+
Sbjct: 167 NIPDTVGYTTPYQFGGIIHTLFERVPNIDKAVISVHCHDDLGMACANSISAIQSGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKL 364
+++G+G +GN A E+V+ + +RT D+ ++
Sbjct: 227 GTLNGIG------ERAGNCALEEVI-----MAIRTRQDLLRV 257
>sp|A2SL35|HOA2_METPP 4-hydroxy-2-oxovalerate aldolase 2 OS=Methylibium petroleiphilum
(strain PM1) GN=Mpe_A3321 PE=3 SV=1
Length = 358
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 141/305 (46%), Gaps = 45/305 (14%)
Query: 81 NSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATS 140
++T+ + L GR V + ++ RDG+ ++ +P V++ L ++G+ +++ T
Sbjct: 2 SATRSMEPDLRGRK---VLLHDMCLRDGMHAKREQIPVEQMVKVAMALDAAGVPLIQVTH 58
Query: 141 FV-----SPKWVPQLADAKDVMAAIQ-NVEGARFPVL-TPNL---KGFEAAVAAGAKEVA 190
S + LA + ++A+ ++ A+ VL P L + ++A GA+ V
Sbjct: 59 GAGLGGNSLQHGFALASNEAYLSAVAPKMKQAKVSVLLIPGLGTMRELQSAYNCGARSVT 118
Query: 191 IFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKV 250
+ +CT D+ ++ +A A R+L + G+L + + P +
Sbjct: 119 V-----------ATHCTEADTAPQH--IAYA-RKLGMDTVGFLM------MAHLNDPEGL 158
Query: 251 AYVSKQLYDMGCSEISLGDTIGVGTPGTV---IPMLEAVLDAVPVDKLAVHFHDTYGQAL 307
A K + D G + + D+ G P V + L AVL P ++ H H G +
Sbjct: 159 AKQGKLMEDYGAQTVYVTDSAGYMLPADVRARVAALRAVLK--PETEIGFHGHHNLGMGI 216
Query: 308 SNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLM-I 366
+N +A+++ G S +D SV+GLG +GN E + + + +G+ T VD+ KLM +
Sbjct: 217 ANSIAAIEEGASRIDGSVAGLG------AGAGNTPLEVFLAVCDRMGIETGVDLFKLMDV 270
Query: 367 AGDFI 371
A D I
Sbjct: 271 AEDVI 275
>sp|B6ELK0|LEU1_ALISL 2-isopropylmalate synthase OS=Aliivibrio salmonicida (strain
LFI1238) GN=leuA PE=3 SV=1
Length = 515
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA +S D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAFALERLGVDVIEAGFPISSP-----GDFESVR 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-YR 216
++++ +R L+ + + VAA A +VA S S ++ ++D L R Y
Sbjct: 60 TIAKHIKNSRICALSRAVTK-DIDVAADALKVAEAFRIHTFISTSTVH--VQDKLRRSYD 116
Query: 217 DVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT 275
DV + R Y V C G P + + + + G + I++ DT+G
Sbjct: 117 DVVEMGVKAVQRARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGANTINIPDTVGYTI 176
Query: 276 PGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCP 332
PG +++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++G+G
Sbjct: 177 PGEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQVEGTINGIG--- 233
Query: 333 YAKGASGNVATEDVVYMLNG----LGVRTNV 359
+GN + E++ +L LGV T++
Sbjct: 234 ---ERAGNCSLEEIAMILQTRSEYLGVHTSL 261
>sp|A1JJH7|LEU1_YERE8 2-isopropylmalate synthase OS=Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081) GN=leuA PE=3 SV=1
Length = 520
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 208 IEDSLIRYRDVALAARELSIP-VRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
IE L R D LA S+ R Y V C G P + + + + G + I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRIVEAAINAGATTI 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + VP +DK ++VH HD G +++N + ++Q G V+
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYQRVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLMIAGDFICK 373
+++GLG +GN + E+V+ + N LGV TN++ +++ + K
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRENMLGVHTNINHQEIYRTSQLVSK 275
>sp|B7VIF2|LEU1_VIBSL 2-isopropylmalate synthase OS=Vibrio splendidus (strain LGP32)
GN=leuA PE=3 SV=1
Length = 515
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 25/277 (9%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA +S D + V
Sbjct: 5 VIIFDTTLRDGEQALAASLTVKEKLQIAYALERLGVDVIEAGFPISSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNL-KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-Y 215
++++ +R L+ + K +AA A A +VA S S ++ ++D L R Y
Sbjct: 60 TIAKHIKDSRICALSRAVAKDIDAA--AEALKVADQFRIHTFISTSTVH--VQDKLRRSY 115
Query: 216 RDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
DV A + R Y V C G P + + + + G I++ DT+G
Sbjct: 116 DDVVEMAVKAVKHARNYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGAKTINIPDTVGYT 175
Query: 275 TPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGC 331
P +++ + D VP +D+ ++VH HD G +++N +A++Q G ++ +++G+G
Sbjct: 176 VPNEFGGIIKTLFDRVPNIDQAIISVHCHDDLGMSVANSIAAVQAGARQIEGTINGIG-- 233
Query: 332 PYAKGASGNVATEDVVYMLNG----LGVRTNVDIRKL 364
+GN + E++ ++ LGV T +D +++
Sbjct: 234 ----ERAGNCSLEEIAMIIKTRQELLGVHTGLDHKEI 266
>sp|Q8TYB1|LEU1_METKA Probable 2-isopropylmalate synthase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=leuA PE=3 SV=1
Length = 499
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 50/289 (17%)
Query: 94 VPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADA 153
+P V+I + RDG Q + KVE+ + L G+ +EA P ++
Sbjct: 1 MPDRVRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEA-------GFPVASEG 53
Query: 154 KDVMAAIQNVEGARFPV----LTPNLKG-FEAAVAAGAKEVAIFASASESFSKSNINCTI 208
+ A++ + G L +KG +AA+ A V +F + S+ + + +
Sbjct: 54 E--FEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSR 111
Query: 209 EDSLIRYRD-----------VALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQL 257
E++L R + V +A + + R YL V VE
Sbjct: 112 EEALERAIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEA-------------- 157
Query: 258 YDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMG 317
G +++ DT+GV TP + + V+DAV V ++VH H+ +G A++N LA+++ G
Sbjct: 158 ---GADRVNVPDTVGVMTPPEMYRLTAEVVDAVDV-PVSVHCHNDFGMAVANSLAAVEAG 213
Query: 318 ISTVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMI 366
V +V+G+G +GN + E VV L L +D+R M+
Sbjct: 214 AEQVHVTVNGIG------ERAGNASLEQVVMALKAL-YDIELDVRTEML 255
>sp|A8AB61|LEU1_IGNH4 Probable 2-isopropylmalate synthase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=leuA PE=3
SV=1
Length = 399
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 21/277 (7%)
Query: 91 LGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQL 150
L +P V+I + RDG Q P + + KL+++ LA + S +
Sbjct: 13 LENLPKEVRIFDTTLRDGEQT-----PGISFTKEQKLMIARQLAKLGVASIEAGFPAVSQ 67
Query: 151 ADAKDVMAAIQNVEGARFPVLT-PNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIE 209
+ + V A + G L N + + A+ A + +F +AS+ K + T E
Sbjct: 68 GEFEAVKAIAREGLGPEIVALARANKRDIDKALDADVDAIHVFIAASDIHLKYKLRMTRE 127
Query: 210 DSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAY-VSKQLYDMGCSEISLG 268
++L R A+ A E + + + V P +G Y + + + D G + +
Sbjct: 128 EALRR----AVEAVEYA---KSHGVTVEFSPEDGTRADLNYLYTMVEAVVDAGADRVDIP 180
Query: 269 DTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGL 328
DT+GV TP + +++ +L A ++VH H+ +G A++N +A ++ G +V+G+
Sbjct: 181 DTVGVMTPTRMKYLIKFILPAAKGRIVSVHCHNDFGLAVANSIAGIEAGARQAHVTVNGI 240
Query: 329 GGCPYAKGASGNVATEDVVYMLNG-LGVRTNVDIRKL 364
G +GN A E+VV L L VRT V+ + L
Sbjct: 241 G------ERAGNAALEEVVAALEFLLNVRTGVNTKLL 271
>sp|Q87SS7|LEU1_VIBPA 2-isopropylmalate synthase OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=leuA PE=3 SV=1
Length = 515
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA +S D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPISSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNL-KGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-Y 215
++++ +R L+ + K +AA A A +VA + S I+ ++D L R Y
Sbjct: 60 TIAKHIKNSRVCALSRAVAKDIDAA--AEALKVADQFRIHTFLATSTIH--VQDKLRRSY 115
Query: 216 RDVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVG 274
DV A R Y V C G P + + + D G S I++ DT+G
Sbjct: 116 DDVLEMAVNAVKHARNYTDDVEFSCEDAGRTPIDNLCRMVEAAIDAGASTINIPDTVGYT 175
Query: 275 TPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGC 331
P +++ + + VP +DK ++VH HD G +++N +A++Q G ++ +++G+G
Sbjct: 176 VPSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGARQIEGTINGIG-- 233
Query: 332 PYAKGASGNVATEDVVYMLNG----LGVRTNV 359
+GN + E++ ++ LGV T +
Sbjct: 234 ----ERAGNCSLEEIAMIIKTRQELLGVSTGI 261
>sp|B0VXM7|HOA_GEOSE 4-hydroxy-2-oxovalerate aldolase OS=Geobacillus stearothermophilus
GN=pheE PE=3 SV=1
Length = 342
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 222 ARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIP 281
A+EL + G+L PVE +V +K+ + G + + D+ G P V
Sbjct: 127 AKELGMETVGFLMMAHMAPVEKLVEQAKL------MESYGADAVYVVDSAGALLPHEVRD 180
Query: 282 MLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNV 341
+ A+ V V+ + H H+ A++N L +++ G + +D SV LG +GN
Sbjct: 181 RIRALKQHVGVE-IGFHGHNNLSLAMANSLVAIEEGATRIDGSVRCLGA------GAGNT 233
Query: 342 ATEDVVYMLNGLGVRTNVDIRKLM 365
TE +V +L+ LGV+T +D+ K+M
Sbjct: 234 QTEVLVAVLDRLGVKTGIDLYKMM 257
>sp|P58967|AKSA_METMA Putative homocitrate synthase AksA OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=aksA PE=3 SV=1
Length = 405
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 24/260 (9%)
Query: 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAK 154
P ++I +V RDG Q + K+ + L S G+ V+EA V AD K
Sbjct: 20 PLDIEICDVTLRDGEQTPGVVFSKEQKLAVASELDSMGIEVIEAGFPVVS------ADEK 73
Query: 155 DVMAAIQNVEG--ARFPVLTPNLKG-FEAAVAAGAKEVAIFASASESFSKSNINCTIEDS 211
+++ I N +G +R L+ +KG +AA+ V+IF + S+ K + ++ED
Sbjct: 74 EIVKEIAN-QGFNSRICCLSRAVKGDVDAALECDVDIVSIFIAMSDMHLKYKYHRSLEDM 132
Query: 212 LIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK-VAYVSKQLYDMGCSEISLGDT 270
L ++ A + + VR PVE + K V K Y +SL DT
Sbjct: 133 LGCAKEAIEYATDHGLKVRFAAEDASRTPVERLKQAFKEVENEYKVQY------VSLADT 186
Query: 271 IGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGG 330
+G+ P T ++ + +V + +H HD G A +N LA+ + G + ++V+ +G
Sbjct: 187 VGILNPTTTNYLVSEIFKSVNT-AICIHCHDDLGMATANTLAAAEAGAKQLHTTVNAIG- 244
Query: 331 CPYAKGASGNVATEDVVYML 350
+GN + E+V+ L
Sbjct: 245 -----ERAGNASLEEVLVAL 259
>sp|A7H667|LEU1_CAMJD 2-isopropylmalate synthase OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=leuA PE=3
SV=1
Length = 511
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 208 IEDSLIRYRDVALA-ARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
I+D L + D L+ A+ I R Y V C G P + ++ + G I
Sbjct: 108 IQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAIKAGAKTI 167
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G P +++ + + VP +DK ++VH H+ G A N L+++ G ++
Sbjct: 168 NIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSAILQGARQIE 227
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAG---DFICKHLGRTS 379
+++GLG +GN A E+VV + ++T RK + G D C+++ +TS
Sbjct: 228 CTINGLG------ERAGNCALEEVV-----MAIKT----RKDYLQGFYTDIKCENISKTS 272
Query: 380 GSKTAI 385
+AI
Sbjct: 273 KLVSAI 278
>sp|Q9FG67|MAM1_ARATH Methylthioalkylmalate synthase 1, chloroplastic OS=Arabidopsis
thaliana GN=MAM1 PE=1 SV=1
Length = 506
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 178 FEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVV 237
+EA A + +F S S+ K + T E+ + ++A+++ + + G+
Sbjct: 174 WEALKYAKRPRILVFTSTSDIHMKYKLKKTQEEVI----EMAVSSIRFAKSL-GFNDIQF 228
Query: 238 GCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTP---GTVIPMLEAVLDAVPVDK 294
GC G + + + G + +++GDT+G+ P G ++ L+A +
Sbjct: 229 GCEDGGRSDKDFLCKILGEAIKAGVTVVTIGDTVGINMPHEYGELVTYLKANTPGIDDVV 288
Query: 295 LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVV------- 347
+AVH H+ G A +N +A ++ G V+ +++G+G SGN + E+VV
Sbjct: 289 VAVHCHNDLGLATANSIAGIRAGARQVEVTINGIG------ERSGNASLEEVVMALKCRG 342
Query: 348 -YMLNGLGVRTNVDIRKLMIAGDFICKHLG 376
Y++N GV T +D R++M + ++ G
Sbjct: 343 AYVIN--GVYTKIDTRQIMATSKMVQEYTG 370
>sp|Q9EVE3|LEU1_BUCUL 2-isopropylmalate synthase (Fragment) OS=Buchnera aphidicola subsp.
Uroleucon rurale GN=leuA PE=3 SV=1
Length = 437
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 13/128 (10%)
Query: 253 VSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSN 309
+ ++L G I++ DT+G TP + +++ + + VP + K ++VH HD G A+ N
Sbjct: 128 IVEKLIKSGVKTINIPDTVGYSTPDELTFIIKNLFERVPNIHKSIISVHCHDDLGMAVGN 187
Query: 310 ILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLM 365
+A++Q G ++ +++G+G +GN A E+V+ + N LGV TN++ +++
Sbjct: 188 SIAAIQAGARQIEGTINGIG------ERAGNTALEEVIMAIKVRKNILGVSTNINHKEIY 241
Query: 366 IAGDFICK 373
I +
Sbjct: 242 RTSQMISR 249
>sp|Q7N129|LEU1_PHOLL 2-isopropylmalate synthase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=leuA PE=3 SV=1
Length = 520
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 179 EAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVG 238
EA A A + +F + S+ +S + T E+ + +A + + R
Sbjct: 86 EALKVADAFRIHVFLATSDLHIESKLKKTFENVM------EMATQSIKRARRYTDDVEFS 139
Query: 239 CPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--L 295
C G P + + + G + I++ DT+G TP ++ +++ VP +DK +
Sbjct: 140 CEDAGRTPIDNLCRIVENAIKAGATTINIPDTVGYTTPYQFGGIITNLIERVPNIDKAII 199
Query: 296 AVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGASGNVATEDVVYML----N 351
+VH HD G +++N + ++Q G ++ +++GLG +GN + E+V+ +
Sbjct: 200 SVHCHDDLGMSVANSITAVQSGARQIEGTINGLG------ERAGNCSLEEVIMAIKVRQQ 253
Query: 352 GLGVRTNVDIRKL 364
LGV TN++ +++
Sbjct: 254 MLGVYTNINHQEI 266
>sp|A8G9R1|LEU1_SERP5 2-isopropylmalate synthase OS=Serratia proteamaculans (strain 568)
GN=leuA PE=3 SV=1
Length = 524
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 208 IEDSLIRYRDVALAARELSIP-VRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
IE L R D L S+ R Y V C G P + V + + G + I
Sbjct: 107 IESKLKRSFDEVLEMAIRSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAINAGATTI 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + D VP +DK ++VH HD G A+ N +A++Q G V+
Sbjct: 167 NIPDTVGYTTPNQFGGIITTLYDRVPNIDKAIISVHCHDDLGMAVGNSIAAVQAGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLM 365
+++G+G +GN + E+V+ + + + V TN++ +++
Sbjct: 227 GTLNGIG------ERAGNTSLEEVIMAIKVRQDIMNVHTNINHQEIF 267
>sp|Q6LV24|LEU1_PHOPR 2-isopropylmalate synthase OS=Photobacterium profundum GN=leuA PE=3
SV=1
Length = 514
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 23/271 (8%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
V I + RDG Q + K+++ L G+ V+EA +S D + V
Sbjct: 5 VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDVIEAGFPISSP-----GDFESVQ 59
Query: 158 AAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIR-YR 216
++++ +R L+ + + VAA + +VA S S I+ ++D L R Y
Sbjct: 60 TIAKHIKNSRVCALSRAVAK-DIDVAAESLKVAEAFRIHTFISTSTIH--VQDKLRRSYD 116
Query: 217 DVALAARELSIPVRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT 275
DV A R Y V C G P + + + + G I++ DT+G
Sbjct: 117 DVIEMAIAAVKRARNYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYTL 176
Query: 276 PGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCP 332
P ++ + + VP +DK ++VH HD G +++N +A++Q G V+ +++GLG
Sbjct: 177 PSEFGGIVAQLFNRVPNIDKAIISVHCHDDLGMSVANSMAAVQAGARQVEGTINGLG--- 233
Query: 333 YAKGASGNVATEDVVYML----NGLGVRTNV 359
+GN + E++ ++ + LGV TN+
Sbjct: 234 ---ERAGNCSLEEIAMIIKTRSDFLGVETNI 261
>sp|Q479E5|HOA5_DECAR 4-hydroxy-2-oxovalerate aldolase 5 OS=Dechloromonas aromatica
(strain RCB) GN=Daro_3808 PE=3 SV=1
Length = 354
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 205 NCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSE 264
+CT D+ ++ +A A R+L + G+L + + P +A K + G
Sbjct: 117 HCTEADTSPQH--IAFA-RKLGMDSTGFLM------MAHLNTPEGLAQQGKLMESYGAQT 167
Query: 265 ISLGDTIGVGTPGTVIPMLEAVLDAV-PVDKLAVHFHDTYGQALSNILASLQMGISTVDS 323
+ + D+ G PG V + A+ D + P ++ H H G ++N +A+++ G S +D+
Sbjct: 168 VYITDSAGYMLPGDVKARVSALRDVLKPETEIGFHGHHNMGMGIANSIAAIEAGASRIDA 227
Query: 324 SVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLM-IAGDFI 371
SV GLG +GN E V + +G+ T D+ KLM +A D I
Sbjct: 228 SVGGLG------AGAGNTPLEAFVAVCERMGIETGCDLFKLMDMAEDII 270
>sp|Q7UI51|LEU1_RHOBA 2-isopropylmalate synthase OS=Rhodopirellula baltica (strain SH1)
GN=leuA PE=3 SV=2
Length = 527
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 259 DMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQ 315
D G + I++ DT+G TPG + + + D VP +DK L+ H HD G A++N LA++
Sbjct: 173 DAGATTINVPDTVGYTTPGEIYDRFKMLRDRVPNMDKAVLSTHCHDDLGMAVANSLAAVD 232
Query: 316 MGISTVDSSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLMIAGDFI 371
G ++ +++G+G +GN A E++V + + +TN++ ++L+ +
Sbjct: 233 AGAGQIECTINGIG------ERAGNAALEELVMAMKTRQDFYHCQTNINSKRLVPVSRLV 286
Query: 372 CKHLG 376
K G
Sbjct: 287 SKTTG 291
>sp|Q8TKQ6|AKSA_METAC Putative homocitrate synthase AksA OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=aksA
PE=3 SV=1
Length = 405
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 37/275 (13%)
Query: 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSS-----GLAVVEATSFVSPKWVPQ 149
P ++I +V RDG Q P VV + KL V+S G+ V+EA V +
Sbjct: 20 PLDIEICDVTLRDGEQT-----PGVVFTKEQKLAVASELDSMGIEVIEAGFPVVSAY--- 71
Query: 150 LADAKDVMAAIQNVEG--ARFPVLTPNLKG-FEAAVAAGAKEVAIFASASESFSKSNINC 206
K+++ I N +G +R L+ +KG +AA+ V+IF + S+ K +
Sbjct: 72 ---EKEIVKEIAN-QGYDSRICCLSRAVKGDVDAALDCDVDIVSIFIAMSDMHLKYKYHR 127
Query: 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSK-VAYVSKQLYDMGCSEI 265
T+ED L ++ A + + VR P++ + K V K Y +
Sbjct: 128 TLEDMLGCAKEAIEYATDHGLNVRFAAEDASRTPIDRLKQAFKEVENEYKVQY------V 181
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSV 325
SL DTIG+ P T ++ + V + +H HD G A +N LA+ + G + ++V
Sbjct: 182 SLADTIGILNPTTTHYLVSEIFKCVNT-SICIHCHDDLGMATANTLAAAEAGAKQLHTTV 240
Query: 326 SGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVD 360
+G+G +GN + E+ ML L V+ ++
Sbjct: 241 NGIG------ERAGNASLEE---MLVALRVQYGIE 266
>sp|C3MPM7|HOSA_SULIL Putative homocitrate synthase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=LS215_1332 PE=3 SV=1
Length = 461
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 100 IVEVGPRDGLQNEKNIVPAVV-----KVELIKLLVSSGLAVVEATSFVSPKWVPQLADAK 154
+++VG D E P V+ +VE+ K L G++++EA P P + +
Sbjct: 1 MIKVGILDSTLREGEQTPGVIFTVDQRVEIAKALSDLGVSMIEAGH---PAVSPDIYEGI 57
Query: 155 DVMAAIQNVEGARFPVLTPNLKG--------FEAAVAAGAKEVAIFASASESFSKSNINC 206
+ ++ EG ++T + G E A +AIF S+ K+
Sbjct: 58 KRIVKLKK-EG----IITSEIVGHSRAVKRDIEIAAELEVNRIAIFYGVSDLHLKAKHKA 112
Query: 207 TIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEIS 266
T E++L + A+ + VR + +V VSK D G +S
Sbjct: 113 TREEALRTIAETISYAKNHGVKVRFTAEDGSRTDFDFLVT------VSKTARDAGADRVS 166
Query: 267 LGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQMGISTVDSSVS 326
+ DT+G+ P + A+ VP + +H H+ G A++N LA+++ G + + ++V+
Sbjct: 167 IADTVGILYPSKTKELFSALTREVPNLEFDIHAHNDLGLAVANALAAIEGGATIIHATVN 226
Query: 327 GLG 329
GLG
Sbjct: 227 GLG 229
>sp|Q9K8E8|LEU1_BACHD 2-isopropylmalate synthase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=leuA PE=3 SV=1
Length = 515
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 58/303 (19%)
Query: 98 VKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVM 157
+ + + RDG Q+ + K+E+ K L G+ ++EA S + D + V
Sbjct: 4 ISVFDTTLRDGEQSAGVNLNFEEKMEIAKQLERLGVDIIEAGFPASSQ-----GDFQSVK 58
Query: 158 AAIQNVEGARFPVLTPNLK-----GFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSL 212
A + V+G+ L +++ +EA +A + +F + S + + T E +
Sbjct: 59 AIAETVKGSSVTGLARSVQKDIDAAWEALKSAEEPRIHLFIATSPIHMEHKLRMTPEQVI 118
Query: 213 -----------IRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMG 261
R++ V +A + S +L+ ++ ++ G
Sbjct: 119 EKAVESVKYAASRFKHVQWSAEDASRSDFPFLAQIIEAVIQA-----------------G 161
Query: 262 CSEISLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGI 318
+ I+L DT+G TP + M + + VP +DK L+ H HD G A++N LA++Q G
Sbjct: 162 ATVINLPDTVGYTTPQEIKRMFQYMKQNVPSIDKVSLSTHNHDDLGMAVANSLAAIQGGA 221
Query: 319 STVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVRTNVDIRKLMIAGD--FICKHLG 376
V+ +++G+G +GN + E++ LN IRK + I K +
Sbjct: 222 DQVECTINGIG------ERAGNASLEEIAVALN---------IRKDHYETETGLILKEIK 266
Query: 377 RTS 379
RTS
Sbjct: 267 RTS 269
>sp|B1JK98|LEU1_YERPY 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=leuA PE=3 SV=1
Length = 520
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 208 IEDSLIRYRDVALAARELSIP-VRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
IE L R D LA S+ R Y V C G P + V + G + I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + + VP +DK ++VH HD G +++N + ++Q G V+
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLMIAGDFICK 373
+++GLG +GN + E+V+ + LGV TN++ +++ + K
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSK 275
>sp|Q66EM1|LEU1_YERPS 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=leuA PE=3 SV=1
Length = 520
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 208 IEDSLIRYRDVALAARELSIP-VRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
IE L R D LA S+ R Y V C G P + V + G + I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + + VP +DK ++VH HD G +++N + ++Q G V+
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLMIAGDFICK 373
+++GLG +GN + E+V+ + LGV TN++ +++ + K
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSK 275
>sp|A4TQA2|LEU1_YERPP 2-isopropylmalate synthase OS=Yersinia pestis (strain Pestoides F)
GN=leuA PE=3 SV=1
Length = 520
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 208 IEDSLIRYRDVALAARELSIP-VRGYLSCV-VGCPVEGMVPPSKVAYVSKQLYDMGCSEI 265
IE L R D LA S+ R Y V C G P + V + G + I
Sbjct: 107 IESKLKRSFDDVLAMAVHSVKRARNYTDDVEFSCEDAGRTPIDNLCRVVEAAITAGATTI 166
Query: 266 SLGDTIGVGTPGTVIPMLEAVLDAVP-VDK--LAVHFHDTYGQALSNILASLQMGISTVD 322
++ DT+G TP ++ + + VP +DK ++VH HD G +++N + ++Q G V+
Sbjct: 167 NIPDTVGYTTPYQFGGIITDLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVE 226
Query: 323 SSVSGLGGCPYAKGASGNVATEDVVYML----NGLGVRTNVDIRKLMIAGDFICK 373
+++GLG +GN + E+V+ + LGV TN++ +++ + K
Sbjct: 227 GTINGLG------ERAGNCSLEEVIMAIKVRHEMLGVHTNINHQEIYRTSQLVSK 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,624,709
Number of Sequences: 539616
Number of extensions: 5343118
Number of successful extensions: 16648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 16073
Number of HSP's gapped (non-prelim): 632
length of query: 398
length of database: 191,569,459
effective HSP length: 120
effective length of query: 278
effective length of database: 126,815,539
effective search space: 35254719842
effective search space used: 35254719842
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)